BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024401
(268 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 129/227 (56%), Gaps = 16/227 (7%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVALNFALDI 58
+M R++H N+V F+GA + P + IVTE L SL + L S +LD L+ A D+
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 59 ARAMDCLHANG--IIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXXY-R 114
A+ M+ LH I+HRDLK NLL+ D+K ++K+ DFGL+R
Sbjct: 147 AKGMNYLHNRNPPIVHRDLKSPNLLV--DKKYTVKVCDFGLSRLKASXFLXSKXAAGTPE 204
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA 174
WMAPE+ LR + N K DVYSFG++LWEL T + P+ ++ Q A FK
Sbjct: 205 WMAPEV-----LRD---EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP 221
R +P +++P +A I++ CW +P RPSF+ I+ +L + + PP
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 126/227 (55%), Gaps = 16/227 (7%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYL-VSLRPNKLDLHVALNFALDI 58
+M R++H N+V F+GA + P + IVTE L SL + L S +LD L+ A D+
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 59 ARAMDCLHANG--IIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXXXY-R 114
A+ M+ LH I+HR+LK NLL+ D+K ++K+ DFGL+R
Sbjct: 147 AKGMNYLHNRNPPIVHRNLKSPNLLV--DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE 204
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA 174
WMAPE+ LR + N K DVYSFG++LWEL T + P+ ++ Q A FK
Sbjct: 205 WMAPEV-----LRD---EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP 221
R +P +++P +A I++ CW +P RPSF+ I+ +L + + PP
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 108/225 (48%), Gaps = 23/225 (10%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ + +KH N++ G C K+P + +V E G L + L R + + +N+A+ IA
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIA 115
Query: 60 RAMDCLHANGI---IHRDLKPDNLLLTP-------DQKSLKLADFGLARXXXXXXXXXXX 109
R M+ LH I IHRDLK N+L+ K LK+ DFGLAR
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA 175
Query: 110 XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA 169
Y WMAPE+ +G DV+S+G++LWELLT +PF G+ L AY
Sbjct: 176 GA-YAWMAPEVIRASMFSKGS--------DVWSYGVLLWELLTGEVPFRGIDGLAVAYGV 226
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 214
A +P A +++ CW DP+ RPSF+ I+ L
Sbjct: 227 AMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA---LNFALDI 58
+SRV H N+VK GAC +P+ +V E G SL L P L + A +++ L
Sbjct: 56 LSRVNHPNIVKLYGACLNPV-CLVMEYAEGGSLYNVLHGAEP--LPYYTAAHAMSWCLQC 112
Query: 59 ARAMDCLHA---NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 115
++ + LH+ +IHRDLKP NLLL LK+ DFG A W
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA--W 170
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE--GMSNLQAAYAAAFKH 173
MAPE++ E +Y+ K DV+S+GI+LWE++T R PF+ G + + A
Sbjct: 171 MAPEVF--------EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-AVHNG 221
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
RP L +++ + ++ CW +DP+ RPS +I++++ +
Sbjct: 222 TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA---LNFALDI 58
+SRV H N+VK GAC +P+ +V E G SL L P L + A +++ L
Sbjct: 55 LSRVNHPNIVKLYGACLNPV-CLVMEYAEGGSLYNVLHGAEP--LPYYTAAHAMSWCLQC 111
Query: 59 ARAMDCLHA---NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 115
++ + LH+ +IHRDLKP NLLL LK+ DFG A W
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA--W 169
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE--GMSNLQAAYAAAFKH 173
MAPE++ E +Y+ K DV+S+GI+LWE++T R PF+ G + + A
Sbjct: 170 MAPEVF--------EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-AVHNG 220
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
RP L +++ + ++ CW +DP+ RPS +I++++ +
Sbjct: 221 TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C +P IVTE +P +L YL ++ V L A I+
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQIS 140
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 141 SAMEYLEKKNFIHRDLAARNCLVG-ENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 199
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHA 174
PE Y+T ++ K DV++FG++LWE+ T + P+ G+ +L Y K
Sbjct: 200 PESLAYNTFSI----------KSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYDLLEKGY 248
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQ 206
R PE P + ++++CW P RPSF++
Sbjct: 249 RMEQPEGCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 17/196 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A AR
Sbjct: 73 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTAR 131
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ +R + Y+ + DVY+FGIVL+EL+T +LP+ ++N + +
Sbjct: 191 PEV-----IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS--- 242
Query: 178 LPEDISPDLAFIVQSC 193
+SPDL+ + +C
Sbjct: 243 ----LSPDLSKVRSNC 254
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 17/196 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A AR
Sbjct: 61 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTAR 119
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 120 GMDYLHAKSIIHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 178
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ +R + Y+ + DVY+FGIVL+EL+T +LP+ ++N + +
Sbjct: 179 PEV-----IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS--- 230
Query: 178 LPEDISPDLAFIVQSC 193
+SPDL+ + +C
Sbjct: 231 ----LSPDLSKVRSNC 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 17/196 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A AR
Sbjct: 73 VLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTAR 131
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ +R + Y+ + DVY+FGIVL+EL+T +LP+ ++N + +
Sbjct: 191 PEV-----IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS--- 242
Query: 178 LPEDISPDLAFIVQSC 193
+SPDL+ + +C
Sbjct: 243 ----LSPDLSKVRSNC 254
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 15/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPL--MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M++++H NLV+ LG + + IVTE + SL YL S + L L F+LD+
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 126
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
AM+ L N +HRDL N+L++ D + K++DFGL + +W AP
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPV--KWTAP 183
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG 177
E LR+ K ++ K DV+SFGI+LWE+ + R+P+ + L+ K +
Sbjct: 184 E-----ALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKGYKMD 234
Query: 178 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P+ P + ++++CW D +RPSF Q+ L
Sbjct: 235 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 15/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPL--MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M++++H NLV+ LG + + IVTE + SL YL S + L L F+LD+
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 111
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
AM+ L N +HRDL N+L++ D + K++DFGL + +W AP
Sbjct: 112 CEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPV--KWTAP 168
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG 177
E LR+ K ++ K DV+SFGI+LWE+ + R+P+ + L+ K +
Sbjct: 169 E-----ALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKGYKMD 219
Query: 178 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P+ P + ++++CW D +RPSF Q+ L
Sbjct: 220 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 254
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A A+
Sbjct: 57 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQ 115
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 174
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R +K Y+ + DVY+FGIVL+EL+T +LP+ ++N Q + + P
Sbjct: 175 PEV-----IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Query: 177 GLPE---DISPDLAFIVQSCWVEDPNLRPSFSQII 208
L + + + ++ C + + RP F QI+
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 75 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 134
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 135 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 193
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 194 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 244
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 245 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A A+
Sbjct: 84 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQ 142
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 143 GMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 201
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R +K Y+ + DVY+FGIVL+EL+T +LP+ ++N Q + + P
Sbjct: 202 PEV-----IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 256
Query: 177 GLPE---DISPDLAFIVQSCWVEDPNLRPSFSQII 208
L + + + ++ C + + RP F QI+
Sbjct: 257 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 291
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A A+
Sbjct: 77 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQ 135
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 136 GMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 194
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R +K Y+ + DVY+FGIVL+EL+T +LP+ ++N Q + + P
Sbjct: 195 PEV-----IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 249
Query: 177 GLPE---DISPDLAFIVQSCWVEDPNLRPSFSQII 208
L + + + ++ C + + RP F QI+
Sbjct: 250 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 284
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A A+
Sbjct: 59 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQ 117
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 118 GMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 176
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R +K Y+ + DVY+FGIVL+EL+T +LP+ ++N Q + + P
Sbjct: 177 PEV-----IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 231
Query: 177 GLPE---DISPDLAFIVQSCWVEDPNLRPSFSQII 208
L + + + ++ C + + RP F QI+
Sbjct: 232 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 266
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 182
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 183 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 233
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A A+
Sbjct: 57 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQ 115
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R +K Y+ + DVY+FGIVL+EL+T +LP+ ++N Q + + P
Sbjct: 175 PEV-----IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Query: 177 GLPE---DISPDLAFIVQSCWVEDPNLRPSFSQII 208
L + + + ++ C + + RP F QI+
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 181 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 231
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+MS + H N+VK G +P +V E +P L L+ + + + V L LDIA
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR-MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIAL 133
Query: 61 AMDCLHANG--IIHRDLKPDNLLLTP-DQKS---LKLADFGLARXXXXXXXXXXXXXXYR 114
++ + I+HRDL+ N+ L D+ + K+ADFGL++ ++
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGN--FQ 191
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA 174
WMAPE E++ Y K D YSF ++L+ +LT PF+ S + + +
Sbjct: 192 WMAPETIGA------EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 175 --RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
RP +PED P L +++ CW DP RP FS I++ L+
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A A+
Sbjct: 85 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQ 143
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 202
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R +K Y+ + DVY+FGIVL+EL+T +LP+ ++N Q + + P
Sbjct: 203 PEV-----IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 257
Query: 177 GLPE---DISPDLAFIVQSCWVEDPNLRPSFSQII 208
L + + + ++ C + + RP F QI+
Sbjct: 258 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A A+
Sbjct: 62 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQ 120
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R +K Y+ + DVY+FGIVL+EL+T +LP+ ++N Q + + P
Sbjct: 180 PEV-----IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 234
Query: 177 GLPE---DISPDLAFIVQSCWVEDPNLRPSFSQII 208
L + + + ++ C + + RP F QI+
Sbjct: 235 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 185
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 186 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 236
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 126 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 184
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 185 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 235
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 185
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 186 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 236
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A A+
Sbjct: 62 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQ 120
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R +K Y+ + DVY+FGIVL+EL+T +LP+ ++N Q + + P
Sbjct: 180 PEV-----IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 234
Query: 177 GLPE---DISPDLAFIVQSCWVEDPNLRPSFSQII 208
L + + + ++ C + + RP F QI+
Sbjct: 235 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 182
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 183 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 233
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A A+
Sbjct: 85 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQ 143
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 202
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R +K Y+ + DVY+FGIVL+EL+T +LP+ ++N Q + + P
Sbjct: 203 PEV-----IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 257
Query: 177 GLPE---DISPDLAFIVQSCWVEDPNLRPSFSQII 208
L + + + ++ C + + RP F QI+
Sbjct: 258 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 185
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 186 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 236
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 181 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 231
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL ++ V L A I+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 181 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 231
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAPAGAKFPIKWTA 181
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 182 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 232
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAPAGAKFPIKWTA 182
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 183 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 233
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 17/231 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++HD LVK + I+TE + SL +L S +K L ++F+ IA
Sbjct: 236 VMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 295
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ K+ADFGLAR + +W AP
Sbjct: 296 GMAFIEQRNYIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 354
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E + + T+ K DV+SFGI+L E++T R+P+ GMSN + A +
Sbjct: 355 EAINFGSFTI----------KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM 404
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
P PE+ +L I+ CW P RP+F I +L+ F +P
Sbjct: 405 P-RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXEEIP 454
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL ++ V L A I+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 126
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 185
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 186 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 236
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G P + IVT+ G SL +L + K ++ ++ A A+
Sbjct: 57 VLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQ 115
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX---XXXXXXXXXXXYRWMA 117
MD LHA IIHRDLK +N+ L D ++K+ DFGLA WMA
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R +K Y+ + DVY+FGIVL+EL+T +LP+ ++N Q + + P
Sbjct: 175 PEV-----IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Query: 177 GLPE---DISPDLAFIVQSCWVEDPNLRPSFSQII 208
L + + + ++ C + + RP F QI+
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL ++ V L A I+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 181 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 231
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 15/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPL--MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M++++H NLV+ LG + + IVTE + SL YL S + L L F+LD+
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 298
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
AM+ L N +HRDL N+L++ D + K++DFGL + +W AP
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPV--KWTAP 355
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG 177
E LR+ K ++ K DV+SFGI+LWE+ + R+P+ + L+ K +
Sbjct: 356 E-----ALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKGYKMD 406
Query: 178 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P+ P + ++++CW D RP+F Q+ L
Sbjct: 407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHR+L N L+ + +K+ADFGL+R + +W A
Sbjct: 326 SAMEYLEKKNFIHRNLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 384
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHA 174
PE Y+ ++ K DV++FG++LWE+ T + P+ G+ +L Y K
Sbjct: 385 PESLAYNKFSI----------KSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDY 433
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
R PE + ++++CW +P+ RPSF++I
Sbjct: 434 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL +++ V L A I+
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHR+L N L+ + +K+ADFGL+R + +W A
Sbjct: 368 SAMEYLEKKNFIHRNLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 426
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHA 174
PE Y+ ++ K DV++FG++LWE+ T + P+ G+ +L Y K
Sbjct: 427 PESLAYNKFSI----------KSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDY 475
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
R PE + ++++CW +P+ RPSF++I
Sbjct: 476 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++HD LVK + I+TE + SL +L S +K L ++F+ IA
Sbjct: 63 VMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 122
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ K+ADFGLAR + +W AP
Sbjct: 123 GMAFIEQRNYIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 181
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E + + T+ K DV+SFGI+L E++T R+P+ GMSN + A +
Sbjct: 182 EAINFGSFTI----------KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM 231
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 214
P PE+ +L I+ CW P RP+F I +L+ F
Sbjct: 232 P-RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+MS + H N+VK G +P +V E +P L L+ + + + V L LDIA
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR-MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIAL 133
Query: 61 AMDCLHANG--IIHRDLKPDNLLLTP-DQKS---LKLADFGLARXXXXXXXXXXXXXXYR 114
++ + I+HRDL+ N+ L D+ + K+ADFG ++ ++
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGN--FQ 191
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA 174
WMAPE E++ Y K D YSF ++L+ +LT PF+ S + + +
Sbjct: 192 WMAPETIGA------EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 175 --RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
RP +PED P L +++ CW DP RP FS I++ L+
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL ++ V L A I+
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 119
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 120 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 178
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ Q Y K R
Sbjct: 179 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRM 229
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+ E + +L YL +++ V L A I+
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 185
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 186 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 236
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+ E + +L YL +++ V L A I+
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 181
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 182 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 232
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 15/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPL--MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M++++H NLV+ LG + + IVTE + SL YL S + L L F+LD+
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 117
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
AM+ L N +HRDL N+L++ D + K++DFGL + +W AP
Sbjct: 118 CEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPV--KWTAP 174
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG 177
E LR+ ++ K DV+SFGI+LWE+ + R+P+ + L+ K +
Sbjct: 175 E-----ALREAA---FSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKGYKMD 225
Query: 178 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P+ P + ++++CW D +RPSF Q+ L
Sbjct: 226 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 260
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL ++ V L A I+
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 119
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 120 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTFTAHAGAKFPIKWTA 178
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ Q Y K R
Sbjct: 179 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRM 229
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+TE + +L YL ++ V L A I+
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 328
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHR+L N L+ + +K+ADFGL+R + +W A
Sbjct: 329 SAMEYLEKKNFIHRNLAARNCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 387
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHA 174
PE Y+ ++ K DV++FG++LWE+ T + P+ G+ +L Y K
Sbjct: 388 PESLAYNKFSI----------KSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDY 436
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
R PE + ++++CW +P+ RPSF++I
Sbjct: 437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+ E + +L YL ++ V L A I+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 181 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 231
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+ E + +L YL ++ V L A I+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ +L Y K R
Sbjct: 181 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDYRM 231
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 129 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 187
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 188 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 237
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 238 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 276
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+MS + H N+VK G +P +V E +P L L+ + + + V L LDIA
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR-MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIAL 133
Query: 61 AMDCLHANG--IIHRDLKPDNLLLTP-DQKS---LKLADFGLARXXXXXXXXXXXXXXYR 114
++ + I+HRDL+ N+ L D+ + K+ADF L++ ++
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGN--FQ 191
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHA 174
WMAPE E++ Y K D YSF ++L+ +LT PF+ S + + +
Sbjct: 192 WMAPETIGA------EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 175 --RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
RP +PED P L +++ CW DP RP FS I++ L+
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 127 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 185
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 186 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 235
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 236 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 131 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 189
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 190 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 239
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 240 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 278
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 126 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 184
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 185 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 234
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 235 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 273
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAP 179
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 180 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 230 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 130 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 188
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 189 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 238
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 239 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 277
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 127 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 185
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 186 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 235
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 236 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 180 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 230 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 19/217 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M ++ H LV+ G C + + +VTE + L YL + R L LD+
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVC 114
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
M L +IHRDL N L+ +Q +K++DFG+ R + +W +
Sbjct: 115 EGMAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 173
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHA 174
PE++S Y++K DV+SFG+++WE+ + ++P+E SN + + F+
Sbjct: 174 PEVFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 225
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
+P L S + I+ CW E P RP+FS+++R L
Sbjct: 226 KPRLA---STHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 56 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 116 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 174
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 175 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 224
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 225 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 263
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++HD LVK + I+TE + SL +L S +K L ++F+ IA
Sbjct: 230 VMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 289
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 120
M + IHRDL+ N+L++ K+ADFGLAR +W APE
Sbjct: 290 GMAFIEQRNYIHRDLRAANILVSASL-VCKIADFGLARVGAKFPI--------KWTAPEA 340
Query: 121 --YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG 177
+ + T+ K DV+SFGI+L E++T R+P+ GMSN + A + P
Sbjct: 341 INFGSFTI----------KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP- 389
Query: 178 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 214
PE+ +L I+ CW P RP+F I +L+ F
Sbjct: 390 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 123 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 181
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 182 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 231
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 232 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 270
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 115/231 (49%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA------------ 51
KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 52 --LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDXXKKT 209
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ + Y ++ DV+SFG++LWE+ T P+ G+ ++
Sbjct: 210 TNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VE 259
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ +
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 122 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 180
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 181 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 230
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 231 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 269
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 179
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 180 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 230 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 33/228 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA------------ 51
KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 52 --LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKT 250
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ + Y ++ DV+SFG++LWE+ T P+ G+ ++
Sbjct: 251 TNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VE 300
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
+ + R P + + +L +++ CW P+ RP+F Q++ L+
Sbjct: 301 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA------------ 51
KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 52 --LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 140 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKT 198
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ + Y ++ DV+SFG++LWE+ T P+ G+ ++
Sbjct: 199 TNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VE 248
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ +
Sbjct: 249 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 299
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA------------ 51
KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 52 --LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 143 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKT 201
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ + Y ++ DV+SFG++LWE+ T P+ G+ ++
Sbjct: 202 TNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VE 251
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ +
Sbjct: 252 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 302
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA------------ 51
KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 52 --LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 144 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKT 202
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ + Y ++ DV+SFG++LWE+ T P+ G+ ++
Sbjct: 203 TNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VE 252
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ +
Sbjct: 253 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 121 GMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 180 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 230 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA------------ 51
KH N++ LGAC PL VIV G +LR+YL + RP L+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 52 --LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKT 209
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ + Y ++ DV+SFG++LWE+ T P+ G+ ++
Sbjct: 210 TNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VE 259
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ +
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 19/219 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M ++ H LV+ G C + + +V E + L YL + R L LD+
Sbjct: 55 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVC 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
M L +IHRDL N L+ +Q +K++DFG+ R + +W +
Sbjct: 114 EGMAYLEEASVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 172
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHA 174
PE++S Y++K DV+SFG+++WE+ + ++P+E SN + + F+
Sbjct: 173 PEVFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 224
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA 213
+P L S + I+ CW E P RP+FS+++R L A
Sbjct: 225 KPRLA---STHVYQIMNHCWKERPEDRPAFSRLLRQLAA 260
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRP--------------NKLDLH 49
KH N++ LGAC PL VIV G +LR+YL + RP +L
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 50 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 136 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKT 194
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ + Y ++ DV+SFG++LWE+ T P+ G+ ++
Sbjct: 195 TNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VE 244
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ +
Sbjct: 245 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 2 MSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVS----LRPNKLDLHVALNFAL 56
M ++ H LVKF G C K+ + IVTE + L YL S L P++L L
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCY 111
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--R 114
D+ M L ++ IHRDL N L+ D +K++DFG+ R + +
Sbjct: 112 DVCEGMAFLESHQFIHRDLAARNCLVDRDL-CVKVSDFGMTRYVLDDQYVSSVGTKFPVK 170
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKH 173
W APE++ Y++K DV++FGI++WE+ + ++P++ +N + + H
Sbjct: 171 WSAPEVFHYFK--------YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH 222
Query: 174 --ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
RP L D + I+ SCW E P RP+F Q++
Sbjct: 223 RLYRPHLASDT---IYQIMYSCWHELPEKRPTFQQLL 256
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M +KH NLV+ LG C ++P I+ E + +L YL ++ V L A I+
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 119
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L IHRDL N L+ + +K+ADFGL+R + +W A
Sbjct: 120 SAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 178
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARP 176
PE + ++ K DV++FG++LWE+ T + P+ G+ Q Y K R
Sbjct: 179 PESLAY--------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRM 229
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
PE + ++++CW +P+ RPSF++I
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRP--------------NKLDLH 49
KH N++ LGAC PL VIV G +LR+YL + RP +L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 50 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKT 209
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ + Y ++ DV+SFG++LWE+ T P+ G+ ++
Sbjct: 210 TNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VE 259
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ +
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYYKKT 262
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 263 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 312
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 313 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYYKKT 216
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 217 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 266
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDXXKKT 216
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 217 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 266
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 145 DLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT-ENNVMKIADFGLARDINNIDYYKKT 203
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 204 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 253
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 254 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 304
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYYKKT 216
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 217 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 266
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 147 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYYKKT 205
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 206 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 255
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 256 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDXXKKT 216
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 217 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 266
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYYKKT 216
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 217 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 266
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYYKNT 216
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 217 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 266
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 150 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYYKKT 208
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 209 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 258
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 259 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYYKKT 216
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 217 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 266
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 21/222 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H LV+ + I+TE + SL +L + KL ++ L+ A IA
Sbjct: 57 LMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHR+L+ N+L++ D S K+ADFGLAR + +W AP
Sbjct: 117 GMAFIEERNYIHRNLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 175
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPFEGMSNLQAAY--AAAFKH 173
E Y T T+ K DV+SFGI+L E++T+ R+P+ GM+N + ++
Sbjct: 176 EAINYGTFTI----------KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 225
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P++ +L +++ CW E P RP+F + +L F
Sbjct: 226 VR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 264
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ + +H N++ F+G + IVT+ G SL K+L ++ K + ++ A A+
Sbjct: 85 VLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHL-HVQETKFQMFQLIDIARQTAQ 143
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX---XYRWMA 117
MD LHA IIHRD+K +N+ L + ++K+ DFGLA WMA
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLH-EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL-QAAYAAAFKHARP 176
PE+ +R + ++ + DVYS+GIVL+EL+T LP+ ++N Q + +A P
Sbjct: 203 PEV-----IRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP 257
Query: 177 GLP---EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
L ++ + +V C + RP F QI+ + +L
Sbjct: 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +K+ADFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYYKKT 216
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 217 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 266
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++KHD LV+ + + IVTE + SL +L L L ++ A +A
Sbjct: 57 IMKKLKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + IHRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 117 GMAYIERMNYIHRDLRSANILVG-NGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAP 175
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL+T R+P+ GM+N + +
Sbjct: 176 EAALYGRFTI----------KSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM 225
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P+D L ++ CW +DP RP+F + L + P
Sbjct: 226 P-CPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEP 269
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA------------ 51
KH N++ LGAC PL VIV G +LR+YL + P L+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 52 --LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
++ A +AR M+ L + IHRDL N+L+T D +K+ADFGLAR
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKT 209
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ + Y ++ DV+SFG++LWE+ T P+ G+ ++
Sbjct: 210 TNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VE 259
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ +
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 19/217 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M ++ H LV+ G C + + +V E + L YL + R L LD+
Sbjct: 55 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVC 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
M L +IHRDL N L+ +Q +K++DFG+ R + +W +
Sbjct: 114 EGMAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 172
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHA 174
PE++S Y++K DV+SFG+++WE+ + ++P+E SN + + F+
Sbjct: 173 PEVFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 224
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
+P L S + I+ CW E P RP+FS+++R L
Sbjct: 225 KPRLA---STHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 19/217 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M ++ H LV+ G C + + +V E + L YL + R L LD+
Sbjct: 53 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVC 111
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
M L +IHRDL N L+ +Q +K++DFG+ R + +W +
Sbjct: 112 EGMAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 170
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHA 174
PE++S Y++K DV+SFG+++WE+ + ++P+E SN + + F+
Sbjct: 171 PEVFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 222
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
+P L S + I+ CW E P RP+FS+++R L
Sbjct: 223 KPRLA---STHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 6 KHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN---------- 53
KH N++ LGAC PL VIV G +LR+YL + RP ++ +N
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKG-NLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
+AR M+ L + IHRDL N+L+T + +++ADFGLAR
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMRIADFGLARDINNIDYYKKT 216
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE L+ V Y ++ DV+SFG+++WE+ T P+ G+ ++
Sbjct: 217 TNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VE 266
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R P + + +L +++ CW P+ RP+F Q++ L+ L
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 19/217 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M ++ H LV+ G C + + +V E + L YL + R L LD+
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVC 116
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
M L +IHRDL N L+ +Q +K++DFG+ R + +W +
Sbjct: 117 EGMAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 175
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHA 174
PE++S Y++K DV+SFG+++WE+ + ++P+E SN + + F+
Sbjct: 176 PEVFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 227
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
+P L S + I+ CW E P RP+FS+++R L
Sbjct: 228 KPRLA---STHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 19/217 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M ++ H LV+ G C + + +V E + L YL + R L LD+
Sbjct: 75 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVC 133
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
M L +IHRDL N L+ +Q +K++DFG+ R + +W +
Sbjct: 134 EGMAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 192
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFKHA 174
PE++S Y++K DV+SFG+++WE+ + ++P+E SN + + F+
Sbjct: 193 PEVFSF--------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 244
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
+P L S + I+ CW E P RP+FS+++R L
Sbjct: 245 KPRLA---STHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 1 MMSRVKHDNLVKFLGAC--KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
++ + H N+V+ +G C K P+ IV EL+ G +L + +L + L D
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIY-IVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDA 222
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRW 115
A M+ L + IHRDL N L+T ++ LK++DFG++R +W
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVT-EKNVLKISDFGMSREEADGVXAASGGLRQVPVKW 281
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA 174
APE L G Y+++ DV+SFGI+LWE + P+ +SN Q K
Sbjct: 282 TAPE-----ALNYG---RYSSESDVWSFGILLWETFSLGASPYPNLSN-QQTREFVEKGG 332
Query: 175 RPGLPEDISPDLAF-IVQSCWVEDPNLRPSFSQIIRMLNAF 214
R PE + PD F +++ CW +P RPSFS I + L +
Sbjct: 333 RLPCPE-LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 20/221 (9%)
Query: 1 MMSRVKHDNLVKFLGAC--KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
++ + H N+V+ +G C K P+ IV EL+ G +L + +L + L D
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIY-IVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDA 222
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRW 115
A M+ L + IHRDL N L+T ++ LK++DFG++R +W
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVT-EKNVLKISDFGMSREEADGVYAASGGLRQVPVKW 281
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA 174
APE L G Y+++ DV+SFGI+LWE + P+ +SN Q K
Sbjct: 282 TAPE-----ALNYG---RYSSESDVWSFGILLWETFSLGASPYPNLSN-QQTREFVEKGG 332
Query: 175 RPGLPEDISPDLAF-IVQSCWVEDPNLRPSFSQIIRMLNAF 214
R PE + PD F +++ CW +P RPSFS I + L +
Sbjct: 333 RLPCPE-LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 122 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 180
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFK 172
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A A +
Sbjct: 181 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 230
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 204
RP L S + I+ SCW E + RP+F
Sbjct: 231 LYRPHLA---SEKVYTIMYSCWHEKADERPTF 259
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 114
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 115 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 173
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFK 172
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A A +
Sbjct: 174 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 223
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 204
RP L S + I+ SCW E + RP+F
Sbjct: 224 LYRPHLA---SEKVYTIMYSCWHEKADERPTF 252
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 130
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP 189
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFK 172
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A A +
Sbjct: 190 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 239
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 204
RP L S + I+ SCW E + RP+F
Sbjct: 240 LYRPHLA---SEKVYTIMYSCWHEKADERPTF 268
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 27/228 (11%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 115
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 174
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFK 172
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A A +
Sbjct: 175 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 224
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSF----SQIIRMLNAFLF 216
RP L S + I+ SCW E + RP+F S I+ +++ L+
Sbjct: 225 LYRPHLA---SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDENLY 269
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 52 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 110
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 111 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 169
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFK 172
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A A +
Sbjct: 170 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 219
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 204
RP L S + I+ SCW E + RP+F
Sbjct: 220 LYRPHLA---SEKVYTIMYSCWHEKADERPTF 248
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 130
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 189
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFK 172
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A A +
Sbjct: 190 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 239
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 204
RP L S + I+ SCW E + RP+F
Sbjct: 240 LYRPHLA---SEKVYTIMYSCWHEKADERPTF 268
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H+ LV+ G C K + I+TE + L YL +R ++ L D+
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 115
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
AM+ L + +HRDL N L+ DQ +K++DFGL+R + RW
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP 174
Query: 118 PE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA--YAAAFK 172
PE +YS +++K D+++FG+++WE+ + ++P+E +N + A A +
Sbjct: 175 PEVLMYSK----------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 224
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 204
RP L S + I+ SCW E + RP+F
Sbjct: 225 LYRPHLA---SEKVYTIMYSCWHEKADERPTF 253
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 7 HDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA-------------- 51
H N++ LGAC+ + + E P +L +L R + D A
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L+FA D+AR MD L IHRDL N+L+ + + K+ADFGL+R
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA-KIADFGLSRGQEVYVKKTMGRL 203
Query: 112 XYRWMAPEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMS--NLQAA 166
RWMA E YS Y DV+S+G++LWE+++ P+ GM+ L
Sbjct: 204 PVRWMAIESLNYSV----------YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 253
Query: 167 YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
++ +P +D DL ++ CW E P RPSF+QI+ LN L
Sbjct: 254 LPQGYRLEKPLNCDDEVYDL---MRQCWREKPYERPSFAQILVSLNRML 299
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 7 HDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA-------------- 51
H N++ LGAC+ + + E P +L +L R + D A
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L+FA D+AR MD L IHRDL N+L+ + + K+ADFGL+R
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA-KIADFGLSRGQEVYVKKTMGRL 193
Query: 112 XYRWMAPEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
RWMA E YS Y DV+S+G++LWE+++ P+ GM+ + Y
Sbjct: 194 PVRWMAIESLNYSV----------YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-LYE 242
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ R P + ++ +++ CW E P RPSF+QI+ LN L
Sbjct: 243 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 289
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 113/225 (50%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 134 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIXETDXXRKGG 192
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 193 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 244
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ F +++ CW +P +RPSF +II
Sbjct: 245 RFVM----EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 93 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTA 151
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ + +KL DFGL+R +WMAPE
Sbjct: 152 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 210
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 211 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 261
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 262 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 298
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 131 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGG 189
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 190 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 241
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ F +++ CW +P +RPSF +II
Sbjct: 242 RFVM----EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 162 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGG 220
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 221 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 272
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ F +++ CW +P +RPSF +II
Sbjct: 273 RFVM----EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 133 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGG 191
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 192 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ F +++ CW +P +RPSF +II
Sbjct: 244 RFVM----EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 127 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGG 185
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 186 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 237
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ F +++ CW +P +RPSF +II
Sbjct: 238 RFVM----EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 134 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGG 192
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 193 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 244
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ F +++ CW +P +RPSF +II
Sbjct: 245 RFVM----EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 133 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGG 191
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 192 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ F +++ CW +P +RPSF +II
Sbjct: 244 RFVM----EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 70 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTA 128
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ + +KL DFGL+R +WMAPE
Sbjct: 129 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 188 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 238
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 239 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 68 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTA 126
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ + +KL DFGL+R +WMAPE
Sbjct: 127 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 185
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 186 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 236
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 237 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 273
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 67 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTA 125
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ + +KL DFGL+R +WMAPE
Sbjct: 126 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 184
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 185 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 235
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 236 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 272
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 62 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTA 120
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ + +KL DFGL+R +WMAPE
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 180 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 230
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 140 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGG 198
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 199 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 250
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ F +++ CW +P +RPSF +II
Sbjct: 251 RFVM----EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTA 123
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ + +KL DFGL+R +WMAPE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 183 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 233
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 130 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGG 188
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 189 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 240
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ F +++ CW +P +RPSF +II
Sbjct: 241 RFVM----EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTA 123
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ + +KL DFGL+R +WMAPE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 183 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 233
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 140 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIYETDYYRKGG 198
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 199 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 250
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ F +++ CW +P +RPSF +II
Sbjct: 251 RFVM----EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 66 VMKKIRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 185 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW +DP RP+F + L + + P
Sbjct: 235 P-CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTA 123
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ + +KL DFGL+R +WMAPE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 183 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 233
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 445 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTA 503
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ + +KL DFGL+R +WMAPE
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 563 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 613
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 614 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 7 HDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA-------------- 51
H N++ LGAC+ + + E P +L +L R + D A
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L+FA D+AR MD L IHR+L N+L+ + + K+ADFGL+R
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVA-KIADFGLSRGQEVYVKKTMGRL 200
Query: 112 XYRWMAPEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
RWMA E YS Y DV+S+G++LWE+++ P+ GM+ + Y
Sbjct: 201 PVRWMAIESLNYSV----------YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-LYE 249
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ R P + ++ +++ CW E P RPSF+QI+ LN L
Sbjct: 250 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 296
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 315 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 375 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 433
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 434 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 483
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW ++P RP+F + L + + P
Sbjct: 484 P-CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTA 123
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ +KL DFGL+R +WMAPE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSATD-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 183 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 233
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 185 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW +DP RP+F + L + + P
Sbjct: 235 P-CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 35/235 (14%)
Query: 9 NLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDIA 59
++V+ LG K ++V EL+ L+ YL SLRP + L + A +IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWM 116
M L+A +HRDL N ++ D ++K+ DFG+ R RWM
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA---AYAAAFK 172
APE +L+ G + D++SFG+VLWE+ + P++G+SN Q +
Sbjct: 200 APE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 227
PE ++ +++ CW +PN+RP+F +I+ +L L PS PE
Sbjct: 252 DQPDNCPERVTD----LMRMCWQFNPNMRPTFLEIVNLLKDDL------HPSFPE 296
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 14/217 (6%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H ++VK +G + + I+ EL LR +L +R LDL + +A ++ A
Sbjct: 445 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTA 503
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAPE 119
+ L + +HRD+ N+L++ +KL DFGL+R +WMAPE
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSATD-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAAAFKHARPGL 178
++ R+ + + DV+ FG+ +WE+L + + PF+G+ N R +
Sbjct: 563 ---SINFRR-----FTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERLPM 613
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P + P L ++ CW DP+ RP F+++ L+ L
Sbjct: 614 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 55 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 114
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 115 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 173
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 174 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 223
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P PE L ++ CW +DP RP+F + L + + P
Sbjct: 224 PCPPE-CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 267
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 57 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 116
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 117 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 175
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 176 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 225
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P PE L ++ CW +DP RP+F + L + + P
Sbjct: 226 PCPPE-CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 269
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 233 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 292
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGL R + +W AP
Sbjct: 293 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAP 351
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 352 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 401
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW +DP RP+F + L + + P
Sbjct: 402 P-CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 445
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M ++HD LV+ ++ + I+TE + SL +L S K+ L ++F+ IA
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 120
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
M + IHRDL+ N+L++ + K+ADFGLAR + +W A
Sbjct: 121 EGMAYIERKNYIHRDLRAANVLVS-ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA 179
Query: 118 PEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA 174
PE + T+ K DV+SFGI+L+E++T ++P+ G +N A + +
Sbjct: 180 PEAINFGCFTI----------KSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYR 229
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 214
P + E+ +L I++ CW E RP+F + +L+ F
Sbjct: 230 MPRV-ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDF 268
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M ++HD LV+ K+ + I+TE + SL +L S K+ L ++F+ IA
Sbjct: 60 LMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 119
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMA 117
M + IHRDL+ N+L++ + K+ADFGLAR + +W A
Sbjct: 120 EGMAYIERKNYIHRDLRAANVLVS-ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA 178
Query: 118 PEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA 174
PE + T+ K +V+SFGI+L+E++T ++P+ G +N A + +
Sbjct: 179 PEAINFGCFTI----------KSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYR 228
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 214
P + E+ +L I++ CW E RP+F + +L+ F
Sbjct: 229 MPRM-ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDF 267
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 292 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 350
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 351 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P PE L ++ CW ++P RP+F + L + + P
Sbjct: 401 PCPPE-CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 292 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 350
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 351 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P PE L ++ CW ++P RP+F + L + + P
Sbjct: 401 PCPPE-CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 7 HDNLVKFLGACK---DPLMVIVTELLPGMSLRKYLVSLR----PNK------LDLHVALN 53
H N+V LGAC PLMVIV E +L YL S R P K L L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXX 110
++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 111 XXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 208 LPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXR 258
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 259 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 305
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 112/225 (49%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N ++ D ++K+ DFG+ R
Sbjct: 125 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-FTVKIGDFGMTRDIXETDXXRKGG 183
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 184 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 235
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ +++ CW +P +RPSF +II
Sbjct: 236 RFVM----EGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 31/228 (13%)
Query: 7 HDNLVKFLGACK---DPLMVIVTELLPGMSLRKYLVSLR----PNK------LDLHVALN 53
H N+V LGAC PLMVIV E +L YL S R P K L L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXXXX 110
++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 111 XXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ + +
Sbjct: 208 LPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFC 257
Query: 169 AAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 258 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 305
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL N+L+ + K+ADFGLAR + +W AP
Sbjct: 126 GMAYVERMNYVHRDLAAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 185 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW +DP RP+F + L + + P
Sbjct: 235 P-CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 7 HDNLVKFLGACKDPL--MVIVTELLPGMSLRKYLVSLR----PNK----------LDLHV 50
H N+V LGAC P ++++TE +L YL S R P K L L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXX 107
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 108 XXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 165
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 200 DARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KIDE 249
Query: 166 AYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 56 VMKKLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 115
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 116 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAP 174
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 175 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 224
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P PE L ++ CW ++P RP+F + L + + P
Sbjct: 225 PCPPE-CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 268
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 33/230 (14%)
Query: 7 HDNLVKFLGACK---DPLMVIVTELLPGMSLRKYLVSLR----PNK--------LDLHVA 51
H N+V LGAC PLMVIV E +L YL S R P K L L
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXXX 108
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 151 IXYSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 109 XXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 210 ARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEE 259
Query: 167 YAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 108/227 (47%), Gaps = 36/227 (15%)
Query: 6 KHDNLVKFLGACK--DPLMVIVTELLPGMSL----RKYLVSL-----RPNKLDLHVALNF 54
+H+N+V LGAC P++VI G L RK L RP L+L L+F
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP--LELRDLLHF 157
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX-- 112
+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARL 216
Query: 113 -YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM---SNLQAA 166
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P+ G+ S
Sbjct: 217 PVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 267
Query: 167 YAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
++ A+P P++I I+Q+CW +P RP+F QI L
Sbjct: 268 VKDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQICSFLQ 310
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 33/231 (14%)
Query: 7 HDNLVKFLGACKDPL--MVIVTELLPGMSLRKYLVSLR----PNK----------LDLHV 50
H N+V LGAC P ++++TE +L YL S R P K L L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXX 107
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 108 XXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 165
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 200 DARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KIDE 249
Query: 166 AYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 108/227 (47%), Gaps = 36/227 (15%)
Query: 6 KHDNLVKFLGACK--DPLMVIVTELLPGMSL----RKYLVSL-----RPNKLDLHVALNF 54
+H+N+V LGAC P++VI G L RK L RP L+L L+F
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP--LELRDLLHF 165
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX-- 112
+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARL 224
Query: 113 -YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM---SNLQAA 166
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P+ G+ S
Sbjct: 225 PVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 275
Query: 167 YAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
++ A+P P++I I+Q+CW +P RP+F QI L
Sbjct: 276 VKDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQICSFLQ 318
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ A IA
Sbjct: 59 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 118
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 119 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 177
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 178 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 227
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P PE L ++ CW ++P RP+F + L + + P
Sbjct: 228 PCPPE-CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 271
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 33/231 (14%)
Query: 7 HDNLVKFLGACKDPL--MVIVTELLPGMSLRKYLVSLR----PNK----------LDLHV 50
H N+V LGAC P ++++TE +L YL S R P K L L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXX 107
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 108 XXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 165
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 200 DARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KIDE 249
Query: 166 AYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 112/232 (48%), Gaps = 35/232 (15%)
Query: 7 HDNLVKFLGACK---DPLMVIVTELLPGMSLRKYLVSLR----PNK----------LDLH 49
H N+V LGAC PLMVIV E +L YL S R P K L L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 50 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXX 106
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRK 198
Query: 107 XXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 199 GDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KID 248
Query: 165 AAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 249 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 17/212 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ + H +LV+ LG C P + +VT+L+P L +Y+ + N + + LN+ + IA+
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAK 151
Query: 61 AMDCLHANGIIHRDLKPDNLLL-TPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWM 116
M L ++HRDL N+L+ +P+ +K+ DFGLAR +WM
Sbjct: 152 GMMYLEERRLVHRDLAARNVLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPIKWM 209
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
A E + + ++ DV+S+G+ +WEL+T P++G+ + K R
Sbjct: 210 ALECIHY--------RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-KGER 260
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
P + D+ ++ CW+ D + RP F ++
Sbjct: 261 LPQPPICTIDVYMVMVKCWMIDADSRPKFKEL 292
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + L +L L L ++ A IA
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 185 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW +DP RP+F + L + + P
Sbjct: 235 P-CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 35/232 (15%)
Query: 7 HDNLVKFLGACK---DPLMVIVTELLPGMSLRKYLVSLR----PNK----------LDLH 49
H N+V LGAC PLMVIV E +L YL S R P K L L
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 50 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXX 106
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 186 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRK 244
Query: 107 XXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 245 GDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KID 294
Query: 165 AAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 295 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 34/231 (14%)
Query: 7 HDNLVKFLGACK---DPLMVIVTELLPGMSLRKYLVSLR----PNK---------LDLHV 50
H N+V LGAC PLMVIV E +L YL S R P K L L
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXXX 107
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 108 XXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA 165
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 209 DARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KIDE 258
Query: 166 AYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 17/212 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ + H +LV+ LG C P + +VT+L+P L +Y+ + N + + LN+ + IA+
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAK 128
Query: 61 AMDCLHANGIIHRDLKPDNLLL-TPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRWM 116
M L ++HRDL N+L+ +P+ +K+ DFGLAR +WM
Sbjct: 129 GMMYLEERRLVHRDLAARNVLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPIKWM 186
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
A E + + ++ DV+S+G+ +WEL+T P++G+ + K R
Sbjct: 187 ALECIHY--------RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-KGER 237
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
P + D+ ++ CW+ D + RP F ++
Sbjct: 238 LPQPPICTIDVYMVMVKCWMIDADSRPKFKEL 269
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHV 50
+M ++V+ LG P +VI+ EL+ L+ YL SLRP + L
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A +IA M L+AN +HRDL N + D ++K+ DFG+ R
Sbjct: 127 MIQMAGEIADGMAYLNANKFVHRDLAARNCXVAED-FTVKIGDFGMTRDIYETDYYRKGG 185
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
RWM+PE +L+ G Y+ DV+SFG+VLWE+ T P++G+SN Q
Sbjct: 186 KGLLPVRWMSPE-----SLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVL 237
Query: 167 YAAAFKHARPGLPE--DISPDLAF-IVQSCWVEDPNLRPSFSQII 208
GL + D PD+ +++ CW +P +RPSF +II
Sbjct: 238 RFVM----EGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 35/232 (15%)
Query: 7 HDNLVKFLGACK---DPLMVIVTELLPGMSLRKYLVSLR----PNK----------LDLH 49
H N+V LGAC PLMVIV E +L YL S R P K L L
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 50 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXX 106
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 151 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRK 209
Query: 107 XXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 210 GDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KID 259
Query: 165 AAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 260 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 311
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 9 NLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDIA 59
++V+ LG K ++V EL+ L+ YL SLRP + L + A +IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWM 116
M L+A +HR+L N ++ D ++K+ DFG+ R RWM
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA---AYAAAFK 172
APE +L+ G + D++SFG+VLWE+ + P++G+SN Q +
Sbjct: 200 APE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 227
PE ++ +++ CW +PN+RP+F +I+ +L L PS PE
Sbjct: 252 DQPDNCPERVTD----LMRMCWQFNPNMRPTFLEIVNLLKDDL------HPSFPE 296
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IV E + SL +L L L ++ A IA
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 185 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW +DP RP+F + L + + P
Sbjct: 235 P-CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 7 HDNLVKFLGACK---DPLMVIVTELLPGMSLRKYLVSLR----PNK----------LDLH 49
H N+V LGAC PLMVIV E +L YL S R P K L L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 50 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXX 106
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDXVRK 207
Query: 107 XXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 208 GDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KID 257
Query: 165 AAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 112/232 (48%), Gaps = 35/232 (15%)
Query: 7 HDNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLR----PNK----------LDLH 49
H N+V LGAC P LMVIV E +L YL S R P K L L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 50 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXX 106
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRK 207
Query: 107 XXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 208 GDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KID 257
Query: 165 AAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 9 NLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDIA 59
++V+ LG K ++V EL+ L+ YL SLRP + L + A +IA
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWM 116
M L+A +HR+L N ++ D ++K+ DFG+ R RWM
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA---AYAAAFK 172
APE +L+ G + D++SFG+VLWE+ + P++G+SN Q +
Sbjct: 201 APE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 252
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 227
PE ++ +++ CW +PN+RP+F +I+ +L L PS PE
Sbjct: 253 DQPDNCPERVTD----LMRMCWQFNPNMRPTFLEIVNLLKDDL------HPSFPE 297
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 35/232 (15%)
Query: 7 HDNLVKFLGACK---DPLMVIVTELLPGMSLRKYLVSLR----PNK----------LDLH 49
H N+V LGAC PLMVIV E +L YL S R P K L L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 50 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX---XXXX 106
+ ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRK 207
Query: 107 XXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+ +
Sbjct: 208 GDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV-KID 257
Query: 165 AAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 35/235 (14%)
Query: 9 NLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDIA 59
++V+ LG K ++V EL+ L+ YL SLRP + L + A +IA
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWM 116
M L+A +HRDL N ++ D ++K+ DFG+ R RWM
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA---AYAAAFK 172
APE +L+ G + D++SFG+VLWE+ + P++G+SN Q +
Sbjct: 199 APE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 250
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 227
PE ++ +++ CW +P +RP+F +I+ +L L PS PE
Sbjct: 251 DQPDNCPERVTD----LMRMCWQFNPKMRPTFLEIVNLLKDDL------HPSFPE 295
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IV E + SL +L L L ++ A IA
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 185 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW +DP RP+F + L + + P
Sbjct: 235 P-CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IV E + SL +L L L ++ A IA
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAP 184
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 185 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW +DP RP+F + L + + P
Sbjct: 235 P-CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 35/235 (14%)
Query: 9 NLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDIA 59
++V+ LG K ++V EL+ L+ YL SLRP + L + A +IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWM 116
M L+A +HRDL N ++ D ++K+ DFG+ R RWM
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA---AYAAAFK 172
APE +L+ G + D++SFG+VLWE+ + P++G+SN Q +
Sbjct: 200 APE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 227
PE ++ +++ CW +P +RP+F +I+ +L L PS PE
Sbjct: 252 DQPDNCPERVTD----LMRMCWQFNPKMRPTFLEIVNLLKDDL------HPSFPE 296
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 9 NLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDIA 59
++V+ LG K ++V EL+ L+ YL SLRP + L + A +IA
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWM 116
M L+A +HRDL N ++ D ++K+ DFG+ R RWM
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA---AYAAAFK 172
APE +L+ G + D++SFG+VLWE+ + P++G+SN Q +
Sbjct: 197 APE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 248
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 227
PE ++ +++ CW +P +RP+F +I+ +L L PS PE
Sbjct: 249 DQPDNCPERVTD----LMRMCWQFNPKMRPTFLEIVNLLKDDL------HPSFPE 293
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 35/235 (14%)
Query: 9 NLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDIA 59
++V+ LG K ++V EL+ L+ YL SLRP + L + A +IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWM 116
M L+A +HRDL N ++ D ++K+ DFG+ R RWM
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA---AYAAAFK 172
APE +L+ G + D++SFG+VLWE+ + P++G+SN Q +
Sbjct: 200 APE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 227
PE ++ +++ CW +P +RP+F +I+ +L L PS PE
Sbjct: 252 DQPDNCPERVTD----LMRMCWQFNPKMRPTFLEIVNLLKDDL------HPSFPE 296
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 9 NLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLD--------LHVALNFALDIA 59
++V+ LG K ++V EL+ L+ YL SLRP + L + A +IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWM 116
M L+A +HRDL N ++ D ++K+ DFG+ R RWM
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQA---AYAAAFK 172
APE +L+ G + D++SFG+VLWE+ + P++G+SN Q +
Sbjct: 200 APE-----SLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPE 227
PE ++ +++ CW +P +RP+F +I+ +L L PS PE
Sbjct: 252 DQPDNCPERVTD----LMRMCWQFNPKMRPTFLEIVNLLKDDL------HPSFPE 296
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 108/246 (43%), Gaps = 44/246 (17%)
Query: 1 MMSRV-KHDNLVKFLGAC--KDPLMVIVTELLPGMSLRKYLVSLRP-------------- 43
MM+++ H+N+V LGAC P+ +I G L YL S R
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG-DLLNYLRSKREKFSEDEIEYENQKR 159
Query: 44 -------NKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL 96
N L L FA +A+ M+ L +HRDL N+L+T K +K+ DFGL
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG-KVVKICDFGL 218
Query: 97 ARXXXXXXXXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN 153
AR +WMAPE +L +G Y K DV+S+GI+LWE+ +
Sbjct: 219 ARDIMSDSNYVVRGNARLPVKWMAPE-----SLFEG---IYTIKSDVWSYGILLWEIFSL 270
Query: 154 RL-PFEGM---SNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+ P+ G+ +N FK +P + ++ I+QSCW D RPSF +
Sbjct: 271 GVNPYPGIPVDANFYKLIQNGFKMDQPFYA---TEEIYIIMQSCWAFDSRKRPSFPNLTS 327
Query: 210 MLNAFL 215
L L
Sbjct: 328 FLGCQL 333
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 7 HDNLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 63
H N++ LGAC+ P ++T +P SL L +D A+ FALD+AR M
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMA 125
Query: 64 CLHA-NGIIHRD-LKPDNLLLTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 120
LH +I R L ++++ D + + +AD + W+APE
Sbjct: 126 FLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPA------WVAPE- 178
Query: 121 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE 180
L++ + D++SF ++LWEL+T +PF +SN++ A + RP +P
Sbjct: 179 ----ALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP 234
Query: 181 DISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
ISP ++ +++ C EDP RP F I+ +L
Sbjct: 235 GISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
+ + H ++V+ LG C + +VT+ LP SL ++ R L + LN+ + IA+
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKG 127
Query: 62 MDCLHANGIIHRDLKPDNLLL-TPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRWMA 117
M L +G++HR+L N+LL +P Q +++ADFG+A +WMA
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLKSPSQ--VQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
E ++ G+ Y ++ DV+S+G+ +WEL+T P+ G+ L K R
Sbjct: 186 LE-----SIHFGK---YTHQSDVWSYGVTVWELMTFGAEPYAGL-RLAEVPDLLEKGERL 236
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP 221
P+ + D+ ++ CW+ D N+RP+F + + N F R P
Sbjct: 237 AQPQICTIDVYMVMVKCWMIDENIRPTFKE---LANEFTRMARDP 278
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ + IA
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 123 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 181
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 182 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 231
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW ++P RP+F + L + + P
Sbjct: 232 P-CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 275
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IV E + SL +L L L ++ A IA
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 292 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 350
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 351 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P PE L ++ CW ++P RP+F + L + + P
Sbjct: 401 PCPPE-CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H NL++ G P M +VTEL P SL L + + L L +A+ +A
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEG 133
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMA 117
M L + IHRDL NLLL + +K+ DFGL R + W A
Sbjct: 134 MGYLESKRFIHRDLAARNLLLA-TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
PE T T +++ D + FG+ LWE+ T + P+ G++ Q + + R
Sbjct: 193 PESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
PED D+ ++ CW P RP+F L FL +P
Sbjct: 245 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVA----LRDFLLEAQP 284
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 40/231 (17%)
Query: 6 KHDNLVKFLGACK--DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA------------ 51
+H+N+V LGAC P++VI TE L +L RP L+
Sbjct: 108 QHENIVNLLGACTHGGPVLVI-TEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 52 --LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
L+F+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 167 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVK 225
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM---S 161
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P+ G+ S
Sbjct: 226 GNARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 276
Query: 162 NLQAAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
++ A+P P++I I+Q+CW +P RP+F QI L
Sbjct: 277 KFYKLVKDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQICSFL 323
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
+ + H ++V+ LG C + +VT+ LP SL ++ R L + LN+ + IA+
Sbjct: 87 IGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKG 145
Query: 62 MDCLHANGIIHRDLKPDNLLL-TPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRWMA 117
M L +G++HR+L N+LL +P Q +++ADFG+A +WMA
Sbjct: 146 MYYLEEHGMVHRNLAARNVLLKSPSQ--VQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
E ++ G+ Y ++ DV+S+G+ +WEL+T P+ G+ L K R
Sbjct: 204 LE-----SIHFGK---YTHQSDVWSYGVTVWELMTFGAEPYAGL-RLAEVPDLLEKGERL 254
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP 221
P+ + D+ ++ CW+ D N+RP+F + + N F R P
Sbjct: 255 AQPQICTIDVYMVMVKCWMIDENIRPTFKE---LANEFTRMARDP 296
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 19/224 (8%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H NL++ G P M +VTEL P SL L + + L L +A+ +A
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEG 133
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMA 117
M L + IHRDL NLLL + +K+ DFGL R + W A
Sbjct: 134 MGYLESKRFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
PE T T +++ D + FG+ LWE+ T + P+ G++ Q + + R
Sbjct: 193 PESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
PED D+ ++ CW P RP+F L FL +P
Sbjct: 245 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVA----LRDFLLEAQP 284
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IVTE + SL +L L L ++ + IA
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 123 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAP 181
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 182 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 231
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW ++P RP+F + L + + P
Sbjct: 232 P-CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 275
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 24/231 (10%)
Query: 2 MSRVKHDNLVKFLGACKD------PLMVIVTELLPGMSLRKYLVSLR----PNKLDLHVA 51
M H N+++ LG C + P +++ + L YL+ R P + L
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L F +DIA M+ L +HRDL N +L D ++ +ADFGL++
Sbjct: 150 LKFMVDIALGMEYLSNRNFLHRDLAARNCMLR-DDMTVCVADFGLSKKIYSGDYYRQGRI 208
Query: 112 X---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAY 167
+W+A E + + Y +K DV++FG+ +WE+ T + P+ G+ N Y
Sbjct: 209 AKMPVKWIAIESLA--------DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-HEMY 259
Query: 168 AAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
R PED +L I+ SCW DP RP+FS + L L +L
Sbjct: 260 DYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H NL++ G P M +VTEL P SL L + + L L +A+ +A
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEG 127
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX----XXXXXXXXXXXXXYRWMA 117
M L + IHRDL NLLL + +K+ DFGL R + W A
Sbjct: 128 MGYLESKRFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
PE T T +++ D + FG+ LWE+ T + P+ G++ Q + + R
Sbjct: 187 PESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
PED D+ ++ CW P RP+F L FL +P
Sbjct: 239 PRPEDCPQDIYNVMVQCWAHKPEDRPTFV----ALRDFLLEAQP 278
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H NL++ G P M +VTEL P SL L + + L L +A+ +A
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEG 123
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMA 117
M L + IHRDL NLLL + +K+ DFGL R + W A
Sbjct: 124 MGYLESKRFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
PE T T +++ D + FG+ LWE+ T + P+ G++ Q + + R
Sbjct: 183 PESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
PED D+ ++ CW P RP+F L FL +P
Sbjct: 235 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVA----LRDFLLEAQP 274
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 19/224 (8%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H NL++ G P M +VTEL P SL L + + L L +A+ +A
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEG 123
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMA 117
M L + IHRDL NLLL + +K+ DFGL R + W A
Sbjct: 124 MGYLESKRFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
PE T T +++ D + FG+ LWE+ T + P+ G++ Q + + R
Sbjct: 183 PESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
PED D+ ++ CW P RP+F L FL +P
Sbjct: 235 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVA----LRDFLLEAQP 274
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H NL++ G P M +VTEL P SL L + + L L +A+ +A
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEG 127
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMA 117
M L + IHRDL NLLL + +K+ DFGL R + W A
Sbjct: 128 MGYLESKRFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
PE T T +++ D + FG+ LWE+ T + P+ G++ Q + + R
Sbjct: 187 PESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSF 204
PED D+ ++ CW P RP+F
Sbjct: 239 PRPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 2 MSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
M + H NL++ G P M +VTEL P SL L + + L L +A+ +A
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEG 123
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX----XXXXXXXXXXXXYRWMA 117
M L + IHRDL NLLL + +K+ DFGL R + W A
Sbjct: 124 MGYLESKRFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
PE T T +++ D + FG+ LWE+ T + P+ G++ Q + + R
Sbjct: 183 PESLKTRT--------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSF 204
PED D+ ++ CW P RP+F
Sbjct: 235 PRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 17/225 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M +++H+ LV+ + + IV E + L +L L L ++ A IA
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY--RWMAP 118
M + +HRDL+ N+L+ + K+ADFGLAR + +W AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
Query: 119 E--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
E LY T+ K DV+SFGI+L EL T R+P+ GM N + +
Sbjct: 185 EAALYGRFTI----------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP 220
P P + L ++ CW +DP RP+F + L + + P
Sbjct: 235 P-CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 36/229 (15%)
Query: 6 KHDNLVKFLGACK--DPLMVIVTELLPGMSL----RKYLV-------SLRPNKLDLHVAL 52
+H+N+V LGAC P++VI G L RK V ++ + L L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 53 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 112
+F+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNA 226
Query: 113 ---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM---SNLQ 164
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P+ G+ S
Sbjct: 227 RLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277
Query: 165 AAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
++ A+P P++I I+Q+CW +P RP+F QI L
Sbjct: 278 KLVKDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 6 KHDNLVKFLGACK--DPLMVIVTELLPGMSL----RKYLVSLRPN--------------- 44
+H+N+V LGAC P++VI G L RK L P+
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 45 -KLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXX 103
L+L L+F+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMND 211
Query: 104 XXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFE 158
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P+
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYP 262
Query: 159 GM---SNLQAAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
G+ S ++ A+P P++I I+Q+CW +P RP+F QI L
Sbjct: 263 GILVNSKFYKLVKDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQICSFLQ 316
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 50/236 (21%)
Query: 6 KHDNLVKFLGACK--DPLMVI------------------VTELLPGMSLRKYLVSLRPNK 45
+H+N+V LGAC P++VI V E P ++ S R
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTR--- 164
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
DL L+F+ +A+ M L + IHRD+ N+LLT + K+ DFGLAR
Sbjct: 165 -DL---LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSN 219
Query: 106 XXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGM 160
+WMAPE ++ V Y + DV+S+GI+LWE+ + L P+ G+
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGI 270
Query: 161 ---SNLQAAYAAAFKHARPGL-PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
S ++ A+P P++I I+Q+CW +P RP+F QI L
Sbjct: 271 LVNSKFYKLVKDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQICSFLQ 322
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 138
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 198 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 248
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I++ CW+ D + RP F ++I
Sbjct: 249 PQPPICTIDVYMIMRKCWMIDADSRPKFRELI 280
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 128
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 188 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 238
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I++ CW+ D + RP F ++I
Sbjct: 239 PQPPICTIDVYMIMRKCWMIDADSRPKFRELI 270
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 131
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 191 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 241
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I++ CW+ D + RP F ++I
Sbjct: 242 PQPPICTIDVYMIMRKCWMIDADSRPKFRELI 273
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 10/205 (4%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVS-LRPNKLDLHVALNFALDI 58
+ +KH N+V++LG+ ++ + I E +PG SL L S P K + + I
Sbjct: 72 LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI 131
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMA 117
+ LH N I+HRD+K DN+L+ LK++DFG + R ++MA
Sbjct: 132 LEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMA 191
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA-YAAAFKHARP 176
PE+ + +G + Y D++S G + E+ T + PF + QAA + P
Sbjct: 192 PEI-----IDKG-PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 245
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLR 201
+PE +S + + C+ DP+ R
Sbjct: 246 EIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 10/205 (4%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVS-LRPNKLDLHVALNFALDI 58
+ +KH N+V++LG+ ++ + I E +PG SL L S P K + + I
Sbjct: 58 LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI 117
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMA 117
+ LH N I+HRD+K DN+L+ LK++DFG + R ++MA
Sbjct: 118 LEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMA 177
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAA-YAAAFKHARP 176
PE+ + +G + Y D++S G + E+ T + PF + QAA + P
Sbjct: 178 PEI-----IDKGPRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 231
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLR 201
+PE +S + + C+ DP+ R
Sbjct: 232 EIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 135
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 195 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 245
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 246 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 134
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 194 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 244
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 245 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 128
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 188 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 238
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 162
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 222 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 272
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 273 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 130
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 190 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 240
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 241 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 131
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 191 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 241
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 242 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 135
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 195 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 245
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 246 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 128
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 188 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 238
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 131
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 191 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 241
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 242 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 153
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 213 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 263
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 264 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 122
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 182 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 232
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 233 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAK 128
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 188 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 238
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 22/214 (10%)
Query: 18 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKP 77
K + I E +L +++ R KLD +AL I + +D +H+ +IHRDLKP
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKP 164
Query: 78 DNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNK 137
N+ L D K +K+ DFGL R+M+PE S+ + Y +
Sbjct: 165 SNIFLV-DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISS--------QDYGKE 215
Query: 138 VDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI-SPDLAFIVQSCWVE 196
VD+Y+ G++L ELL + + + F R G+ DI ++Q +
Sbjct: 216 VDLYALGLILAELLH-------VCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSK 268
Query: 197 DPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDT 230
P RP+ S+I+R L T+ SP E T
Sbjct: 269 KPEDRPNTSEILRTL-----TVWKKSPEKNERHT 297
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 29/235 (12%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M +H+N+V+ + D L V V E L G +L + R N+ + L +
Sbjct: 79 IMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTDIVTHTRMNEEQIAAV---CLAV 134
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A+ LHA G+IHRD+K D++LLT D + +KL+DFG A+ WMA
Sbjct: 135 LQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 193
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PEL S + Y +VD++S GI++ E++ P+ L+ A K R
Sbjct: 194 PELISRLP--------YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDN 240
Query: 178 LP------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
LP +SP L + V DP R + +++++ + FL PP+ VP
Sbjct: 241 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 293
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 29/235 (12%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M +H+N+V+ + D L V V E L G +L + R N+ + L +
Sbjct: 81 IMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTDIVTHTRMNEEQIAAV---CLAV 136
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A+ LHA G+IHRD+K D++LLT D + +KL+DFG A+ WMA
Sbjct: 137 LQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 195
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PEL S + Y +VD++S GI++ E++ P+ L+ A K R
Sbjct: 196 PELISRLP--------YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDN 242
Query: 178 LP------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
LP +SP L + V DP R + +++++ + FL PP+ VP
Sbjct: 243 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 295
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 29/235 (12%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M +H+N+V+ + D L V V E L G +L + R N+ + L +
Sbjct: 70 IMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTDIVTHTRMNEEQIAAV---CLAV 125
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A+ LHA G+IHRD+K D++LLT D + +KL+DFG A+ WMA
Sbjct: 126 LQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 184
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PEL S + Y +VD++S GI++ E++ P+ L+ A K R
Sbjct: 185 PELISRLP--------YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDN 231
Query: 178 LP------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
LP +SP L + V DP R + +++++ + FL PP+ VP
Sbjct: 232 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 284
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 29/235 (12%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M +H+N+V+ + D L V V E L G +L + R N+ + L +
Sbjct: 74 IMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTDIVTHTRMNEEQIAAV---CLAV 129
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A+ LHA G+IHRD+K D++LLT D + +KL+DFG A+ WMA
Sbjct: 130 LQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 188
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PEL S + Y +VD++S GI++ E++ P+ L+ A K R
Sbjct: 189 PELISRLP--------YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDN 235
Query: 178 LP------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
LP +SP L + V DP R + +++++ + FL PP+ VP
Sbjct: 236 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 288
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 29/235 (12%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M +H+N+V+ + D L V++ E L G +L + R N+ + L +
Sbjct: 201 IMRDYQHENVVEMYNSYLVGDELWVVM-EFLEGGALTDIVTHTRMNEEQIAA---VCLAV 256
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A+ LHA G+IHRD+K D++LLT D + +KL+DFG A+ WMA
Sbjct: 257 LQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 315
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PEL S + Y +VD++S GI++ E++ P+ L+ A K R
Sbjct: 316 PELISRLP--------YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDN 362
Query: 178 LP------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
LP +SP L + V DP R + +++++ + FL PP+ VP
Sbjct: 363 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 415
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S++ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 207 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 257
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 29/235 (12%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M +H+N+V+ + D L V V E L G +L + R N+ + L +
Sbjct: 124 IMRDYQHENVVEMYNSYLVGDELWV-VMEFLEGGALTDIVTHTRMNEEQIAAV---CLAV 179
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A+ LHA G+IHRD+K D++LLT D + +KL+DFG A+ WMA
Sbjct: 180 LQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PEL S + Y +VD++S GI++ E++ P+ L+ A K R
Sbjct: 239 PELISRLP--------YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDN 285
Query: 178 LP------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
LP +SP L + V DP R + +++++ + FL PP+ VP
Sbjct: 286 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAGPPASIVP 338
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 7 HDNLVKFLGACK--DPLMVIVTELLPG---MSLRKYLVSLRPNKLDLHV----------- 50
H N+V LGAC P +VI G LR+ S +K +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 51 -ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
L+F+ +A+ M L + IHRDL N+LLT + + K+ DFGLAR
Sbjct: 162 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLARDIKNDSNYVVK 220
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE +++ V Y + DV+S+GI LWEL + P+ GM
Sbjct: 221 GNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 271
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
Y + R PE ++ I+++CW DP RP+F QI++++
Sbjct: 272 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 318
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 7 HDNLVKFLGACK--DPLMVIVTELLPG---MSLRKYLVSLRPNKLDLHV----------- 50
H N+V LGAC P +VI G LR+ S +K +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 51 -ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
L+F+ +A+ M L + IHRDL N+LLT + + K+ DFGLAR
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLARDIKNDSNYVVK 204
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE +++ V Y + DV+S+GI LWEL + P+ GM
Sbjct: 205 GNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
Y + R PE ++ I+++CW DP RP+F QI++++
Sbjct: 256 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S++ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 221 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 271
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 7 HDNLVKFLGACK--DPLMVIVTELLPG---MSLRKYLVSLRPNKLDLHV----------- 50
H N+V LGAC P +VI G LR+ S +K +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 51 -ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
L+F+ +A+ M L + IHRDL N+LLT + + K+ DFGLAR
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLARHIKNDSNYVVK 227
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE +++ V Y + DV+S+GI LWEL + P+ GM
Sbjct: 228 GNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
Y + R PE ++ I+++CW DP RP+F QI++++
Sbjct: 279 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 7 HDNLVKFLGACK--DPLMVIVTELLPG---MSLRKYLVSLRPNKLDLHV----------- 50
H N+V LGAC P +VI G LR+ S +K +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 51 -ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
L+F+ +A+ M L + IHRDL N+LLT + + K+ DFGLAR
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLARDIKNDSNYVVK 227
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE +++ V Y + DV+S+GI LWEL + P+ GM
Sbjct: 228 GNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
Y + R PE ++ I+++CW DP RP+F QI++++
Sbjct: 279 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 7 HDNLVKFLGACK--DPLMVIVTELLPG---MSLRKYLVSLRPNKLDLHV----------- 50
H N+V LGAC P +VI G LR+ S +K +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 51 -ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
L+F+ +A+ M L + IHRDL N+LLT + + K+ DFGLAR
Sbjct: 164 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLARDIKNDSNYVVK 222
Query: 110 XXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQ 164
+WMAPE +++ V Y + DV+S+GI LWEL + P+ GM
Sbjct: 223 GNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 273
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRML 211
Y + R PE ++ I+++CW DP RP+F QI++++
Sbjct: 274 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 320
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 206 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 256
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 257 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 221 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 271
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 173 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 232
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 233 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 283
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 284 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 15/169 (8%)
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
++++ +AR M+ L + IHRDL N+LL+ + +K+ DFGLAR
Sbjct: 202 ISYSFQVARGMEFLSSRKCIHRDLAARNILLS-ENNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 112 X---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
+WMAPE ++ + Y+ K DV+S+G++LWE+ + P+ G+ +
Sbjct: 261 TRLPLKWMAPESIFDKI---------YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF 311
Query: 167 YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + R PE +P++ I+ CW DP RP F++++ L L
Sbjct: 312 CSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAE 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX---YRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 185 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 235
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 236 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 153 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 212
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 213 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 263
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 264 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 246
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 247 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 297
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 298 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 207 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 257
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 163 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 222
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 223 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 273
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 274 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 164 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 223
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 224 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 274
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 275 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 130
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFG A+ +WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 190 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 240
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I++ CW+ D + RP F ++I
Sbjct: 241 PQPPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 221 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 271
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 206 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 256
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 257 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 108/243 (44%), Gaps = 45/243 (18%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M ++H N++KF+G KD + +TE + G +LR + S+ ++ ++FA DIA
Sbjct: 60 VMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIA 118
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR----- 114
M LH+ IIHRDL N L+ + K++ +ADFGLAR +
Sbjct: 119 SGMAYLHSMNIIHRDLNSHNCLVR-ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 115 ----------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 164
WMAPE+ + + Y+ KVDV+SFGIVL E++ G N
Sbjct: 178 KRYTVVGNPYWMAPEMING--------RSYDEKVDVFSFGIVLCEII-------GRVNAD 222
Query: 165 AAY---AAAFKHARPGL-----PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLF 216
Y F G P + P I C DP RPSF + L +L
Sbjct: 223 PDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVK----LEHWLE 278
Query: 217 TLR 219
TLR
Sbjct: 279 TLR 281
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+AR
Sbjct: 138 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 197
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 198 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 248
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 249 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 3 SRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARA 61
S++ H N+V + + D +V E + G +L +Y+ S P L + A+NF I
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILDG 123
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX--XYRWMAPE 119
+ H I+HRD+KP N+L+ + K+LK+ DFG+A+ ++ +PE
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSN-KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
Q + + + D+YS GIVL+E+L PF G + A + A KH + +P
Sbjct: 183 --------QAKGEATDECTDIYSIGIVLYEMLVGEPPFNG----ETAVSIAIKHIQDSVP 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGLAR
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 215 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 265
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++ +L+P L Y+ + N + LN+ + IA+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 130
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 190 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 240
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 241 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++ +L+P L Y+ + N + LN+ + IA+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 128
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 188 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 238
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++ +L+P L Y+ + N + LN+ + IA+
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 132
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 192 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 242
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 243 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++ +L+P L Y+ + N + LN+ + IA+
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 135
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 195 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 245
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 246 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++ +L+P L Y+ + N + LN+ + IA+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 131
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 191 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 241
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 242 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++ +L+P L Y+ + N + LN+ + IA+
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 129
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 189 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 239
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 240 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M + H ++VK +G ++ I+ EL P L YL N L + + ++L I +
Sbjct: 78 IMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICK 136
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAP 118
AM L + +HRD+ N+L+ + +KL DFGL+R +WM+P
Sbjct: 137 AMAYLESINCVHRDIAVRNILVASPE-CVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG 177
E ++ R+ + DV+ F + +WE+L+ + PF + N + K R
Sbjct: 196 E---SINFRR-----FTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLP 246
Query: 178 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P+ P L ++ CW DP+ RP F++++ L+
Sbjct: 247 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 281
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 135
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFG A+ +WMA
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 195 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 245
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 246 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++ +L+P L Y+ + N + LN+ + IA+
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAK 129
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFGLA+ +WMA
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 189 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 239
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 240 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++T+L+P L Y+ + N + LN+ + IA+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 128
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFG A+ +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 188 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 238
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M + H ++VK +G ++ I+ EL P L YL N L + + ++L I +
Sbjct: 62 IMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICK 120
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAP 118
AM L + +HRD+ N+L+ + +KL DFGL+R +WM+P
Sbjct: 121 AMAYLESINCVHRDIAVRNILVASPE-CVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG 177
E ++ R+ + DV+ F + +WE+L+ + PF + N + K R
Sbjct: 180 E---SINFRR-----FTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLP 230
Query: 178 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P+ P L ++ CW DP+ RP F++++ L+
Sbjct: 231 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 265
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 20 PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDN 79
PL IV E + G++LR + + P + A+ D +A++ H NGIIHRD+KP N
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN 146
Query: 80 LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGEKKHYN 135
+L++ ++K+ DFG+AR ++++PE Q +
Sbjct: 147 ILISA-TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE--------QARGDSVD 197
Query: 136 NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISPDLAFI 189
+ DVYS G VL+E+LT PF G S + AY +H R P P E +S DL +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSADLDAV 253
Query: 190 VQSCWVEDPNLR 201
V ++P R
Sbjct: 254 VLKALAKNPENR 265
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M + H ++VK +G ++ I+ EL P L YL N L + + ++L I +
Sbjct: 66 IMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICK 124
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX--YRWMAP 118
AM L + +HRD+ N+L+ + +KL DFGL+R +WM+P
Sbjct: 125 AMAYLESINCVHRDIAVRNILVASPE-CVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARPG 177
E ++ R+ + DV+ F + +WE+L+ + PF + N + K R
Sbjct: 184 E---SINFRR-----FTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLP 234
Query: 178 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P+ P L ++ CW DP+ RP F++++ L+
Sbjct: 235 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRP-----NKLDLHVALNF 54
++S+ H N+V+ +G L I+ EL+ G L+ +L RP + L + L+
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLT--PDQKSLKLADFGLARXXXXXXXXXXXXXX 112
A DIA L N IHRD+ N LLT + K+ DFG+A+
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCA 206
Query: 113 ---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYA 168
+WM PE + + + +K D +SFG++LWE+ + +P+ SN Q
Sbjct: 207 MLPVKWMPPEAFM--------EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLE 257
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
R P++ + I+ CW P RP+F+ I+ +
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 215 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 265
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 18 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKP 77
K + I E +L +++ R KLD +AL I + +D +H+ +I+RDLKP
Sbjct: 91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKP 150
Query: 78 DNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNK 137
N+ L D K +K+ DFGL R+M+PE S+ + Y +
Sbjct: 151 SNIFLV-DTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISS--------QDYGKE 201
Query: 138 VDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI-SPDLAFIVQSCWVE 196
VD+Y+ G++L ELL + + + F R G+ DI ++Q +
Sbjct: 202 VDLYALGLILAELLH-------VCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSK 254
Query: 197 DPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDT 230
P RP+ S+I+R L T+ SP E T
Sbjct: 255 KPEDRPNTSEILRTL-----TVWKKSPEKNERHT 283
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 143
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 203 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 253
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 254 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 296
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRG 126
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 186 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 236
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 237 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 126
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 186 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 236
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 237 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 215 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 265
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 153
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 213 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 263
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 264 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 306
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 215 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 265
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 215 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 265
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 215 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 265
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 215 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 265
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 215 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 265
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N+++ G K ++IVTE + SL +L R + V +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRG 155
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXY 113
IA M L G +HRDL N+L+ + K++DFGL+R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW +PE + + + + DV+S+GIVLWE+++ P+ MSN Q A +
Sbjct: 215 RWTSPEAIAY--------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDE 265
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F QI+ +L+ +
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 20 PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDN 79
PL IV E + G++LR + + P + A+ D +A++ H NGIIHRD+KP N
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN 146
Query: 80 LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGEKKHYN 135
++++ ++K+ DFG+AR ++++PE Q +
Sbjct: 147 IMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QARGDSVD 197
Query: 136 NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISPDLAFI 189
+ DVYS G VL+E+LT PF G S + AY +H R P P E +S DL +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSADLDAV 253
Query: 190 VQSCWVEDPNLR 201
V ++P R
Sbjct: 254 VLKALAKNPENR 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 20 PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDN 79
PL IV E + G++LR + + P + A+ D +A++ H NGIIHRD+KP N
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN 146
Query: 80 LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGEKKHYN 135
++++ ++K+ DFG+AR ++++PE Q +
Sbjct: 147 IMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QARGDSVD 197
Query: 136 NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISPDLAFI 189
+ DVYS G VL+E+LT PF G S + AY +H R P P E +S DL +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSADLDAV 253
Query: 190 VQSCWVEDPNLR 201
V ++P R
Sbjct: 254 VLKALAKNPENR 265
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 20 PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDN 79
PL IV E + G++LR + + P + A+ D +A++ H NGIIHRD+KP N
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN 146
Query: 80 LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGEKKHYN 135
++++ ++K+ DFG+AR ++++PE Q +
Sbjct: 147 IMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QARGDSVD 197
Query: 136 NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISPDLAFI 189
+ DVYS G VL+E+LT PF G S + AY +H R P P E +S DL +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSADLDAV 253
Query: 190 VQSCWVEDPNLR 201
V ++P R
Sbjct: 254 VLKALAKNPENR 265
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++ +L+P L Y+ + N + LN+ + IA+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 130
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFG A+ +WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 190 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 240
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I++ CW+ D + RP F ++I
Sbjct: 241 PQPPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 20 PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDN 79
PL IV E + G++LR + + P + A+ D +A++ H NGIIHRD+KP N
Sbjct: 106 PLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN 163
Query: 80 LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGEKKHYN 135
++++ ++K+ DFG+AR ++++PE Q +
Sbjct: 164 IMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QARGDSVD 214
Query: 136 NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISPDLAFI 189
+ DVYS G VL+E+LT PF G S + AY +H R P P E +S DL +
Sbjct: 215 ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIPPSARHEGLSADLDAV 270
Query: 190 VQSCWVEDPNLR 201
V ++P R
Sbjct: 271 VLKALAKNPENR 282
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 7 HDNLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 63
H N++ LGAC+ P ++T P SL L +D A+ FALD AR
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXA 125
Query: 64 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYST 123
LH L P + L + +S+ + + AR R AP +
Sbjct: 126 FLHT----LEPLIPRHAL---NSRSVXIDEDXTARISXADVKFSFQSPG-RXYAPAWVAP 177
Query: 124 VTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDIS 183
L++ + D +SF ++LWEL+T +PF +SN + A + RP +P IS
Sbjct: 178 EALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGIS 237
Query: 184 PDLAFIVQSCWVEDPNLRPSFSQIIRML 211
P ++ + + C EDP RP F I+ +L
Sbjct: 238 PHVSKLXKICXNEDPAKRPKFDXIVPIL 265
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 39/247 (15%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLR----------------- 42
++ +V H +++K GAC +D ++++ E SLR +L R
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 43 ---PNKLDLHVA--LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA 97
P++ L + ++FA I++ M L ++HRDL N+L+ +K +K++DFGL+
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRK-MKISDFGLS 197
Query: 98 RXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT- 152
R +WMA E L+ + Y + DV+SFG++LWE++T
Sbjct: 198 RDVYEEDSXVKRSQGRIPVKWMAIESLFDHI---------YTTQSDVWSFGVLLWEIVTL 248
Query: 153 NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P+ G+ + H R P++ S ++ ++ CW ++P+ RP F+ I + L
Sbjct: 249 GGNPYPGIPPERLFNLLKTGH-RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
Query: 213 AFLFTLR 219
+ R
Sbjct: 308 KMMVKRR 314
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 134
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 135 IGFGLQVAKGMKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEXXSVHN 192
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 193 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 245 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 134
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 135 IGFGLQVAKGMKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHN 192
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 193 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 245 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 133
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 134 IGFGLQVAKGMKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHN 191
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 192 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 244 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 296
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 25/220 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALD 57
++ + H N++K +D M IV E G L + +VS R L
Sbjct: 73 VLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132
Query: 58 IARAMDCLHANGIIHRDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 115
+ A+ H+ ++H+DLKP+N+L T +K+ DFGLA +
Sbjct: 133 MMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALY 192
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--- 172
MAPE++ K+ K D++S G+V++ LLT LPF G S + A +K
Sbjct: 193 MAPEVF---------KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN 243
Query: 173 ---HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
RP ++P +++ +DP RPS +Q++
Sbjct: 244 YAVECRP-----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGMS---LRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 76 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 127
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 128 IGFGLQVAKGMKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHN 185
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 186 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 237
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 238 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 290
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 102 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 153
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 154 IGFGLQVAKGMKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHN 211
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 212 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 263
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 264 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 316
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 135
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 136 IGFGLQVAKGMKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHN 193
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 194 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 246 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGMS---LRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 130
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 131 IGFGLQVAKGMKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHN 188
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 189 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 240
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 241 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGMS---LRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 135
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 136 IGFGLQVAKGMKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHN 193
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 194 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 246 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 39/247 (15%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLR----------------- 42
++ +V H +++K GAC +D ++++ E SLR +L R
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 43 ---PNKLDLHVA--LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA 97
P++ L + ++FA I++ M L ++HRDL N+L+ +K +K++DFGL+
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK-MKISDFGLS 197
Query: 98 RXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT- 152
R +WMA E L+ + Y + DV+SFG++LWE++T
Sbjct: 198 RDVYEEDSXVKRSQGRIPVKWMAIESLFDHI---------YTTQSDVWSFGVLLWEIVTL 248
Query: 153 NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P+ G+ + H R P++ S ++ ++ CW ++P+ RP F+ I + L
Sbjct: 249 GGNPYPGIPPERLFNLLKTGH-RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
Query: 213 AFLFTLR 219
+ R
Sbjct: 308 KMMVKRR 314
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGMS---LRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 103 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 154
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 155 IGFGLQVAKGMKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHN 212
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 213 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 264
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 265 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 317
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 39/247 (15%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLR----------------- 42
++ +V H +++K GAC +D ++++ E SLR +L R
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 43 ---PNKLDLHVA--LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA 97
P++ L + ++FA I++ M L ++HRDL N+L+ +K +K++DFGL+
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK-MKISDFGLS 197
Query: 98 RXXXXXXXXXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT- 152
R +WMA E L+ + Y + DV+SFG++LWE++T
Sbjct: 198 RDVYEEDSYVKRSQGRIPVKWMAIESLFDHI---------YTTQSDVWSFGVLLWEIVTL 248
Query: 153 NRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P+ G+ + H R P++ S ++ ++ CW ++P+ RP F+ I + L
Sbjct: 249 GGNPYPGIPPERLFNLLKTGH-RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
Query: 213 AFLFTLR 219
+ R
Sbjct: 308 KMMVKRR 314
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGMS---LRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 81 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 132
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 133 IGFGLQVAKGMKYLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEYYSVHN 190
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 191 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 242
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 243 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 295
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 194
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXX-----XXXX 105
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 195 IGFGLQVAKGMKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHN 252
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 253 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 304
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 305 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++ +L+P L Y+ + N + LN+ + IA+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 130
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFG A+ +WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 190 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 240
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 241 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + ++ + LG C + ++ +L+P L Y+ + N + LN+ + IA+
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 132
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWMA 117
M+ L ++HRDL N+L+ Q +K+ DFG A+ +WMA
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHARP 176
L + Y ++ DV+S+G+ +WEL+T P++G+ + + + K R
Sbjct: 192 --------LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 242
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D + RP F ++I
Sbjct: 243 PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 136
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 137 IGFGLQVAKGMKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMLDKEFDSVHN 194
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 195 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 246
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 247 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 135
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 136 IGFGLQVAKGMKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHN 193
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 194 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 246 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 136
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 137 IGFGLQVAKGMKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHN 194
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 195 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 246
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 247 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 299
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 89 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 140
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXX-----XXXX 105
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 141 IGFGLQVAKGMKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHN 198
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 199 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 250
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 251 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 303
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 133
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXX 110
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 134 IGFGLQVAKGMKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHN 191
Query: 111 XX-----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 192 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 244 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 296
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGM---SLRKYL--VSLRPNKLDLHVA 51
+M H N++ LG C PL+V LP M LR ++ + P DL
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVV-----LPYMKHGDLRNFIRNETHNPTVKDL--- 135
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXX-----XXXX 105
+ F L +A+ M L + +HRDL N +L D+K ++K+ADFGLAR
Sbjct: 136 IGFGLQVAKGMKFLASKKFVHRDLAARNCML--DEKFTVKVADFGLARDMYDKEFDSVHN 193
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+WMA E T + + K DV+SFG++LWEL+T P N
Sbjct: 194 KTGAKLPVKWMALESLQT--------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
+ R PE L ++ CW +RPSFS+++ ++A T
Sbjct: 246 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 25/192 (13%)
Query: 20 PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDN 79
PL IV E + G++LR + + P + A+ D +A++ H NGIIHRD+KP N
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN 146
Query: 80 LLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY----RWMAPELYSTVTLRQGEKKHYN 135
++++ ++K+ DFG+AR ++++PE Q +
Sbjct: 147 IMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--------QARGDSVD 197
Query: 136 NKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR--PGLP----EDISPDLAFI 189
+ DVYS G VL+E+LT PF G S AY +H R P P E +S DL +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAY----QHVREDPIPPSARHEGLSADLDAV 253
Query: 190 VQSCWVEDPNLR 201
V ++P R
Sbjct: 254 VLKALAKNPENR 265
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M HDN+V + D L V V E L G +L + R N+ + L +
Sbjct: 95 IMRDYHHDNVVDMYSSYLVGDELWV-VMEFLEGGALTDIVTHTRMNEEQI---ATVCLSV 150
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
RA+ LH G+IHRD+K D++LLT D + +KL+DFG A+ WMA
Sbjct: 151 LRALSYLHNQGVIHRDIKSDSILLTSDGR-IKLSDFGFCAQVSKEVPKRKXLVGTPYWMA 209
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ S + Y +VD++S GI++ E++ P+ LQ A + R
Sbjct: 210 PEVISRLP--------YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-----AMRRIRDS 256
Query: 178 LP------EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
LP +S L + V +P+ R + +++ + FL PPS VP
Sbjct: 257 LPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLG--HPFLKLAGPPSCIVP 309
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 33/235 (14%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVSLRPN-------------- 44
+++ ++H+++VKF G C D PL ++V E + L K+L + P+
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPL-IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKG 128
Query: 45 KLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXX 104
+L L L+ A IA M L + +HRDL N L+ + +K+ DFG++R
Sbjct: 129 ELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL-LVKIGDFGMSRDVYSTD 187
Query: 105 XXXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 160
RWM PE ++ R+ + + DV+SFG++LWE+ T + P+ +
Sbjct: 188 YYRVGGHTMLPIRWMPPE---SIMYRK-----FTTESDVWSFGVILWEIFTYGKQPWFQL 239
Query: 161 SNLQAAYAAAFKHARPGLPEDISPDLAF-IVQSCWVEDPNLRPSFSQIIRMLNAF 214
SN + R + P + ++ CW +P R + +I ++L+A
Sbjct: 240 SNTEV--IECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 111/251 (44%), Gaps = 45/251 (17%)
Query: 1 MMSRVKHDNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + H++++K+ G C+D + +V E +P SLR YL + + L L FA
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQ 142
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I M LHA IHRDL N+LL D + +K+ DFGLA+ YR
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDND-RLVKIGDFGLAK------AVPEGHEXYRVRE 195
Query: 115 -------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNR----------LPF 157
W APE E K Y DV+SFG+ L+ELLT+ L
Sbjct: 196 DGDSPVFWYAPECLK-------EYKFYYAS-DVWSFGVTLYELLTHCDSSQSPPTKFLEL 247
Query: 158 EGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA 213
G++ Q + G P+ ++ ++++CW + + RP+F +I +L
Sbjct: 248 IGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307
Query: 214 FLFTLRPPSPS 224
+ +PS
Sbjct: 308 VHEKYQGQAPS 318
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 5 VKHDNLVKFLGACKDPL-----MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++H N+V+F + + + +V+VTEL +L+ YL + K+ V ++ I
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKI--KVLRSWCRQIL 139
Query: 60 RAMDCLHANG--IIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMA 117
+ + LH IIHRDLK DN+ +T S+K+ D GLA + A
Sbjct: 140 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP-EFXA 198
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE Y ++ Y+ VDVY+FG E T+ P+ N Y +P
Sbjct: 199 PEXY---------EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPA 249
Query: 178 LPEDIS-PDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ P++ I++ C ++ + R S ++
Sbjct: 250 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ +++V E+ G L K+LV R ++ + ++
Sbjct: 63 IMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSM 121
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L +HRDL N+LL ++ K++DFGL++ +W
Sbjct: 122 GMKYLEEKNFVHRDLAARNVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + R+ ++++ DV+S+G+ +WE L+ + P++ M + A + R
Sbjct: 181 APE---CINFRK-----FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQGKR 231
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
P + P+L ++ CW+ RP F + + + A ++L
Sbjct: 232 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 4 RVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNK--LDLHVALNFALDIAR 60
+ +H+N+V F+GAC P + I+T L G +L Y V +R K LD++ A +I +
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTL--YSV-VRDAKIVLDVNKTRQIAQEIVK 141
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL---ARXXXXXXXXXXXXXXYRW-- 115
M LHA GI+H+DLK N+ D + + DFGL + W
Sbjct: 142 GMGYLHAKGILHKDLKSKNVFY--DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199
Query: 116 -MAPELYSTVTLRQGEKK-HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH 173
+APE+ ++ E K ++ DV++ G + +EL PF+ Q A A ++
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK----TQPAEAIIWQM 255
Query: 174 A---RPGLPE-DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
+P L + + +++ I+ CW + RP+F++++ ML
Sbjct: 256 GTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 17/221 (7%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N++ G K ++IVTE + SL +L + + + I+
Sbjct: 76 IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLRGIS 134
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXYRW 115
M L G +HRDL N+L+ + K++DFGL+R RW
Sbjct: 135 AGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA 174
APE + R+ + + DV+S+GIV+WE+++ P+ M+N A +
Sbjct: 194 TAPE---AIAFRK-----FTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYR 245
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P P D L ++ CW ++ N RP F +I+ ML+ +
Sbjct: 246 LPS-PMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 31/236 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + H+N+VK+ G C + + ++ E LP SL++YL + NK++L L +A+
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQ 134
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + MD L + +HRDL N+L+ + + +K+ DFGL +
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPV 193
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNR----------LPFEGMSNL 163
W APE L Q + + DV+SFG+ L ELLT L G ++
Sbjct: 194 FWYAPE-----CLMQSK---FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG 245
Query: 164 QAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
Q + G P + ++ +++ CW P+ R SF +I A L
Sbjct: 246 QMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 17/221 (7%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+++ G + L +IVTE + SL +L + + + + +
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVG 161
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXYRW 115
M L G +HRDL N+L+ + K++DFGL+R RW
Sbjct: 162 AGMRYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA 174
APE + T +++ DV+SFG+V+WE+L P+ M+N + +
Sbjct: 221 TAPEAIAFRT--------FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR 272
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P P L ++ CW +D RP FSQI+ +L+A +
Sbjct: 273 LPA-PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 31/236 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + H+N+VK+ G C + + ++ E LP SL++YL + NK++L L +A+
Sbjct: 64 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQ 122
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + MD L + +HRDL N+L+ + + +K+ DFGL +
Sbjct: 123 ICKGMDYLGSRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNR----------LPFEGMSNL 163
W APE L Q + + DV+SFG+ L ELLT L G ++
Sbjct: 182 FWYAPE-----CLMQSK---FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG 233
Query: 164 QAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
Q + G P + ++ +++ CW P+ R SF +I A L
Sbjct: 234 QMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 289
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+++ G + L +IVTE + SL +L + + + + +
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVG 161
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXYRW 115
M L G +HRDL N+L+ + K++DFGL+R RW
Sbjct: 162 AGMRYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW 220
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA 174
APE + T +++ DV+SFG+V+WE+L P+ M+N + +
Sbjct: 221 TAPEAIAFRT--------FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR 272
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P P L ++ CW +D RP FSQI+ +L+A +
Sbjct: 273 LPA-PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX--- 102
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 248
Query: 103 XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 160
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+
Sbjct: 249 YVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV 299
Query: 161 SNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 300 -KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX--- 102
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 246
Query: 103 XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 160
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+
Sbjct: 247 YVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV 297
Query: 161 SNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 298 -KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 352
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXX--- 102
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 253
Query: 103 XXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 160
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+
Sbjct: 254 YVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV 304
Query: 161 SNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 305 -KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 359
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ +++V E+ G L K+LV R ++ + ++
Sbjct: 389 IMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSM 447
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L +HR+L N+LL ++ K++DFGL++ +W
Sbjct: 448 GMKYLEEKNFVHRNLAARNVLLV-NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + R+ ++++ DV+S+G+ +WE L+ + P++ M + A + R
Sbjct: 507 APE---CINFRK-----FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQGKR 557
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTL 218
P + P+L ++ CW+ RP F + + + A ++L
Sbjct: 558 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L L + ++ +A+ M+ L + IHRDL N+LL+ ++ +K+ DFGLAR
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPD 255
Query: 106 XXXXXXX---YRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGM 160
+WMAPE ++ V Y + DV+SFG++LWE+ + P+ G+
Sbjct: 256 YVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGV 306
Query: 161 SNLQAAYAAAFKHA-RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ + K R P+ +P++ + CW +P+ RP+FS+++ L L
Sbjct: 307 -KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 361
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 5 VKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
++H +++K K +I+ G L Y+V + +K+ A F I A++
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEY 128
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
H + I+HRDLKP+NLLL + ++K+ADFGL+ + APE+ S
Sbjct: 129 CHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG- 186
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPED 181
K + +VDV+S G++L+ +L RLPF+ S FK+ G LP+
Sbjct: 187 ------KLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGVYTLPKF 235
Query: 182 ISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+SP A +++ + +P R S +I++
Sbjct: 236 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 263
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 17/221 (7%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+++ G K M+I+TE + +L K+L + + + + IA
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIA 157
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXYRW 115
M L +HRDL N+L+ + K++DFGL+R RW
Sbjct: 158 AGMKYLANMNYVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 216
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHA 174
APE S + + + DV+SFGIV+WE++T P+ +SN + A
Sbjct: 217 TAPEAISY--------RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR 268
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P P D + ++ CW ++ RP F+ I+ +L+ +
Sbjct: 269 LP-TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 45/243 (18%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKL------DLHV--- 50
+M+ + N+VK LG C M ++ E + L ++L S+ P+ + DL
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 51 -------------ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA 97
L A +A M L +HRDL N L+ + +K+ADFGL+
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG-ENMVVKIADFGLS 221
Query: 98 RXXXXXXXXXXX---XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNR 154
R RWM PE S R Y + DV+++G+VLWE+ +
Sbjct: 222 RNIYSADYYKADGNDAIPIRWMPPE--SIFYNR------YTTESDVWAYGVVLWEIFSYG 273
Query: 155 L-PFEGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
L P+ GM++ + Y + R G PE+ +L +++ CW + P RPSF I R
Sbjct: 274 LQPYYGMAHEEVIY-----YVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 328
Query: 210 MLN 212
+L
Sbjct: 329 ILQ 331
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 5 VKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
++H +++K K +I+ G L Y+V + +K+ A F I A++
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEY 127
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
H + I+HRDLKP+NLLL + ++K+ADFGL+ + APE+ S
Sbjct: 128 CHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG- 185
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPED 181
K + +VDV+S G++L+ +L RLPF+ S FK+ G LP+
Sbjct: 186 ------KLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGVYTLPKF 234
Query: 182 ISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+SP A +++ + +P R S +I++
Sbjct: 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 5 VKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
++H +++K K +I+ G L Y+V + +K+ A F I A++
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEY 118
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
H + I+HRDLKP+NLLL + ++K+ADFGL+ + APE+ S
Sbjct: 119 CHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG- 176
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPED 181
K + +VDV+S G++L+ +L RLPF+ S FK+ G LP+
Sbjct: 177 ------KLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGVYTLPKF 225
Query: 182 ISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+SP A +++ + +P R S +I++
Sbjct: 226 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 253
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 21/231 (9%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M K+ N+V +L + D L V++ E L G SL + ++ + L
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECL-- 127
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A++ LH+N +IHRD+K DN+LL D S+KL DFG A+ WMA
Sbjct: 128 -QALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 185
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ + +K Y KVD++S GI+ E++ P+ + L+A Y A + P
Sbjct: 186 PEVVT--------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPE 236
Query: 178 L--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
L PE +S + C D R S ++I+ + FL +P S P
Sbjct: 237 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ--HQFLKIAKPLSSLTP 285
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 19/223 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + +H N+++ G + + ++I+TE + +L +L L + + + IA
Sbjct: 70 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIA 128
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX------Y 113
M L +HRDL N+L+ + K++DFGL+R
Sbjct: 129 SGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW APE + R+ + + D +S+GIV+WE+++ P+ MSN Q A +
Sbjct: 188 RWTAPE---AIAFRK-----FTSASDAWSYGIVMWEVMSFGERPYWDMSN-QDVINAIEQ 238
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F Q++ L+ +
Sbjct: 239 DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 5 VKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
++H +++K K +I+ G L Y+V + +K+ A F I A++
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEY 122
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
H + I+HRDLKP+NLLL + ++K+ADFGL+ + APE+ S
Sbjct: 123 CHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG- 180
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPED 181
K + +VDV+S G++L+ +L RLPF+ S FK+ G LP+
Sbjct: 181 ------KLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGVYTLPKF 229
Query: 182 ISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+SP A +++ + +P R S +I++
Sbjct: 230 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 257
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 423 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 480
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 481 GMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 539
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + +++K DV+SFG+++WE + + P+ GM + A K R
Sbjct: 540 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGER 590
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI-IRMLNAF 214
G P ++ ++ CW D RP F+ + +R+ N +
Sbjct: 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 19/223 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + +H N+++ G + + ++I+TE + +L +L L + + + IA
Sbjct: 68 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIA 126
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX------Y 113
M L +HRDL N+L+ + K++DFGL+R
Sbjct: 127 SGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFK 172
RW APE + R+ + + D +S+GIV+WE+++ P+ MSN Q A +
Sbjct: 186 RWTAPE---AIAFRK-----FTSASDAWSYGIVMWEVMSFGERPYWDMSN-QDVINAIEQ 236
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
R P D L ++ CW +D N RP F Q++ L+ +
Sbjct: 237 DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLR-----PNKLDLHVALNFA 55
+M + H N++ +G P + LLP M L +R P DL ++F
Sbjct: 75 LMRGLNHPNVLALIGIMLPP-EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFG 130
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
L +AR M+ L +HRDL N +L + ++K+ADFGLAR +
Sbjct: 131 LQVARGMEYLAEQKFVHRDLAARNCMLD-ESFTVKVADFGLARDILDREYYSVQQHRHAR 189
Query: 114 ---RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEGMSNLQAAYAA 169
+W A E S T R + K DV+SFG++LWELLT P+ + +
Sbjct: 190 LPVKWTALE--SLQTYR------FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL 241
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
A P PE L ++Q CW DP +RP+F ++
Sbjct: 242 AQGRRLPQ-PEYCPDSLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 424 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 481
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 482 GMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 540
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + +++K DV+SFG+++WE + + P+ GM + A K R
Sbjct: 541 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGER 591
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI-IRMLNAF 214
G P ++ ++ CW D RP F+ + +R+ N +
Sbjct: 592 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 631
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 59 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 116
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 117 GMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + +++K DV+SFG+++WE + + P+ GM + A K R
Sbjct: 176 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGER 226
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI-IRMLNAF 214
G P ++ ++ CW D RP F+ + +R+ N +
Sbjct: 227 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 266
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 79 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 136
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 137 GMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 195
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + +++K DV+SFG+++WE + + P+ GM + A K R
Sbjct: 196 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGER 246
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI-IRMLNAF 214
G P ++ ++ CW D RP F+ + +R+ N +
Sbjct: 247 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 286
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M+ V + + LG C + +VT+L+P L ++ R +L LN+ + IA+
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENR-GRLGSQDLLNWCMQIAK 130
Query: 61 AMDCLHANGIIHRDLKPDNLLL-TPDQKSLKLADFGLAR---XXXXXXXXXXXXXXYRWM 116
M L ++HRDL N+L+ +P+ +K+ DFGLAR +WM
Sbjct: 131 GMSYLEDVRLVHRDLAARNVLVKSPNH--VKITDFGLARLLDIDETEYHADGGKVPIKWM 188
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
A L ++ + ++ DV+S+G+ +WEL+T P++G+ + K R
Sbjct: 189 A--------LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE-KGER 239
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
P + D+ I+ CW+ D RP F +++
Sbjct: 240 LPQPPICTIDVYMIMVKCWMIDSECRPRFRELV 272
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 71 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 128
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 129 GMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 187
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + +++K DV+SFG+++WE + + P+ GM + A K R
Sbjct: 188 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGER 238
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI-IRMLNAF 214
G P ++ ++ CW D RP F+ + +R+ N +
Sbjct: 239 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 65 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 122
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 123 GMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 181
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + +++K DV+SFG+++WE + + P+ GM + A K R
Sbjct: 182 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGER 232
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI-IRMLNAF 214
G P ++ ++ CW D RP F+ + +R+ N +
Sbjct: 233 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 61 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 118
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 119 GMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + +++K DV+SFG+++WE + + P+ GM + A K R
Sbjct: 178 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGER 228
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI-IRMLNAF 214
G P ++ ++ CW D RP F+ + +R+ N +
Sbjct: 229 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 81 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 138
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 139 GMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + +++K DV+SFG+++WE + + P+ GM + A K R
Sbjct: 198 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGER 248
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI-IRMLNAF 214
G P ++ ++ CW D RP F+ + +R+ N +
Sbjct: 249 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 288
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 81 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 138
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 139 GMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + +++K DV+SFG+++WE + + P+ GM + A K R
Sbjct: 198 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGER 248
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI-IRMLNAF 214
G P ++ ++ CW D RP F+ + +R+ N +
Sbjct: 249 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 288
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR+YL + ++D L +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK-ERIDHIKLLQYTSQ 125
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 185 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
+M ++ + +V+ +G C+ ++V E+ L KYL R K D ++ + ++
Sbjct: 65 VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI-IELVHQVSM 122
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----YRWM 116
M L + +HRDL N+LL Q K++DFGL++ +W
Sbjct: 123 GMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY 181
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKHAR 175
APE + +++K DV+SFG+++WE + + P+ GM + A K R
Sbjct: 182 APECINYYK--------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-AMLEKGER 232
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI-IRMLNAF 214
G P ++ ++ CW D RP F+ + +R+ N +
Sbjct: 233 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 2 MSRVKHDNLVKFLGAC-------KDPLMVIVTELLPGMSLRKYLVSLR----PNKLDLHV 50
M H ++ K +G + P+ +++ + L +L++ R P L L
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ F +DIA M+ L + IHRDL N +L D ++ +ADFGL+R
Sbjct: 139 LVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM-TVCVADFGLSRKIYSGDYYRQGC 197
Query: 111 XX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAA 166
+W+A E + Y DV++FG+ +WE++T + P+ G+ N +
Sbjct: 198 ASKLPVKWLALESLA--------DNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-I 248
Query: 167 YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM 210
Y R P + ++ ++ CW DP RPSF+ +RM
Sbjct: 249 YNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFT-CLRM 291
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 1 MMSRVKHDNLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + H+++VK+ G C+D + +V E +P SLR YL + + L L FA
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR---HCVGLAQLLLFAQQ 120
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I M LHA IHR L N+LL D + +K+ DFGLA+ YR
Sbjct: 121 ICEGMAYLHAQHYIHRALAARNVLLDND-RLVKIGDFGLAK------AVPEGHEYYRVRE 173
Query: 115 -------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT----NRLPFEGMSNL 163
W APE K +Y + DV+SFG+ L+ELLT N+ P + L
Sbjct: 174 DGDSPVFWYAPECLKEC------KFYYAS--DVWSFGVTLYELLTYCDSNQSPHTKFTEL 225
Query: 164 QAAYAAAF----------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA 213
+ R P+ ++ ++++CW + + RP+F ++ +L
Sbjct: 226 IGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX-XXYRW 115
++A A+D LH+ GII+RDLKP+N+LL ++ +KL DFGL++ +
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY 192
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR 175
MAPE V R+G + D +SFG++++E+LT LPF+G + A+
Sbjct: 193 MAPE----VVNRRG----HTQSADWWSFGVLMFEMLTGTLPFQGKDRKET--MTMILKAK 242
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLR 201
G+P+ +SP+ +++ + +P R
Sbjct: 243 LGMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 1 MMSRVKHDNLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + H+++VK+ G C+D + +V E +P SLR YL + + L L FA
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR---HCVGLAQLLLFAQQ 119
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I M LHA IHR L N+LL D + +K+ DFGLA+ YR
Sbjct: 120 ICEGMAYLHAQHYIHRALAARNVLLDND-RLVKIGDFGLAK------AVPEGHEYYRVRE 172
Query: 115 -------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT----NRLPFEGMSNL 163
W APE K +Y + DV+SFG+ L+ELLT N+ P + L
Sbjct: 173 DGDSPVFWYAPECLKEC------KFYYAS--DVWSFGVTLYELLTYCDSNQSPHTKFTEL 224
Query: 164 QAAYAAAF----------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA 213
+ R P+ ++ ++++CW + + RP+F ++ +L
Sbjct: 225 IGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 21/231 (9%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M K+ N+V +L + D L V++ E L G SL + ++ + L
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECL-- 126
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A++ LH+N +IHRD+K DN+LL D S+KL DFG A+ WMA
Sbjct: 127 -QALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 184
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ + +K Y KVD++S GI+ E++ P+ + L+A Y A + P
Sbjct: 185 PEVVT--------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPE 235
Query: 178 L--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
L PE +S + C D R S ++++ + FL +P S P
Sbjct: 236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ--HQFLKIAKPLSSLTP 284
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX-XXYRW 115
++A A+D LH+ GII+RDLKP+N+LL ++ +KL DFGL++ +
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY 192
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR 175
MAPE V R+G + D +SFG++++E+LT LPF+G + A+
Sbjct: 193 MAPE----VVNRRG----HTQSADWWSFGVLMFEMLTGTLPFQGKDRKET--MTMILKAK 242
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLR 201
G+P+ +SP+ +++ + +P R
Sbjct: 243 LGMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX-XXYRW 115
++A A+D LH+ GII+RDLKP+N+LL ++ +KL DFGL++ +
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY 193
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR 175
MAPE V R+G + D +SFG++++E+LT LPF+G + A+
Sbjct: 194 MAPE----VVNRRG----HTQSADWWSFGVLMFEMLTGTLPFQGKDRKET--MTMILKAK 243
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLR 201
G+P+ +SP+ +++ + +P R
Sbjct: 244 LGMPQFLSPEAQSLLRMLFKRNPANR 269
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 21/231 (9%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M K+ N+V +L + D L V++ E L G SL + ++ + L
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECL-- 127
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A++ LH+N +IHR++K DN+LL D S+KL DFG A+ WMA
Sbjct: 128 -QALEFLHSNQVIHRNIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 185
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ + +K Y KVD++S GI+ E++ P+ + L+A Y A + P
Sbjct: 186 PEVVT--------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPE 236
Query: 178 L--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
L PE +S + C D R S ++I+ + FL +P S P
Sbjct: 237 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ--HQFLKIAKPLSSLTP 285
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 23/225 (10%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N++ G K ++I+TE + SL +L R N V +
Sbjct: 87 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRG 143
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----- 112
IA M L +HRDL N+L+ + K++DFGL+R
Sbjct: 144 IAAGMKYLADMNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKI 202
Query: 113 -YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAA 170
RW APE + + + + DV+S+GIV+WE+++ P+ M+N Q A
Sbjct: 203 PIRWTAPEAI--------QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-QDVINAI 253
Query: 171 FKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ R P D L ++ CW +D N RP F QI+ L+ +
Sbjct: 254 EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 298
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 21/231 (9%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M K+ N+V +L + D L V++ E L G SL + ++ + L
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECL-- 126
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A++ LH+N +IHRD+K DN+LL D S+KL DFG A+ WMA
Sbjct: 127 -QALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 184
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ + +K Y KVD++S GI+ E++ P+ + L+A Y A + P
Sbjct: 185 PEVVT--------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPE 235
Query: 178 L--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
L PE +S + C D R S ++++ + FL +P S P
Sbjct: 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ--HQFLKIAKPLSSLTP 284
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 21/231 (9%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M K+ N+V +L + D L V++ E L G SL + ++ + L
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVM-EYLAGGSLTDVVTETCMDEGQIAAVCRECL-- 126
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMA 117
+A++ LH+N +IHRD+K DN+LL D S+KL DFG A+ WMA
Sbjct: 127 -QALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSEMVGTPYWMA 184
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ + +K Y KVD++S GI+ E++ P+ + L+A Y A + P
Sbjct: 185 PEVVT--------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNGTPE 235
Query: 178 L--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
L PE +S + C D R S ++++ + FL +P S P
Sbjct: 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ--HQFLKIAKPLSSLTP 284
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 1 MMSRVKHDNLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + H++++K+ G C+D + +V E +P SLR YL + + L L FA
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQ 125
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I M LHA IHR+L N+LL D + +K+ DFGLA+ YR
Sbjct: 126 ICEGMAYLHAQHYIHRNLAARNVLLDND-RLVKIGDFGLAK------AVPEGHEYYRVRE 178
Query: 115 -------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNR----------LPF 157
W APE E K Y DV+SFG+ L+ELLT+ L
Sbjct: 179 DGDSPVFWYAPECLK-------EYKFYYAS-DVWSFGVTLYELLTHCDSSQSPPTKFLEL 230
Query: 158 EGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA 213
G++ Q + G P+ ++ ++++CW + + RP+F +I +L
Sbjct: 231 IGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKT 290
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 32/234 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVS-------------LRPNK 45
+++ ++H ++V+F G C + PL+++ + G L ++L S + P
Sbjct: 96 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAPGP 154
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L L L A +A M L +HRDL N L+ +K+ DFG++R
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDY 213
Query: 106 XXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMS 161
RWM PE ++ R+ + + DV+SFG+VLWE+ T + P+ +S
Sbjct: 214 YRVGGRTMLPIRWMPPE---SILYRK-----FTTESDVWSFGVVLWEIFTYGKQPWYQLS 265
Query: 162 NLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 214
N +A R P P++ I++ CW +P R S + L A
Sbjct: 266 NTEA--IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 32/234 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVS-------------LRPNK 45
+++ ++H ++V+F G C + PL+++ + G L ++L S + P
Sbjct: 67 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAPGP 125
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L L L A +A M L +HRDL N L+ +K+ DFG++R
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDY 184
Query: 106 XXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMS 161
RWM PE ++ R+ + + DV+SFG+VLWE+ T + P+ +S
Sbjct: 185 YRVGGRTMLPIRWMPPE---SILYRK-----FTTESDVWSFGVVLWEIFTYGKQPWYQLS 236
Query: 162 NLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 214
N +A R P P++ I++ CW +P R S + L A
Sbjct: 237 NTEA--IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 32/226 (14%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 153
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 212
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 213 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 264
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 204
F + R P+ ++ I+ CW + N RPSF
Sbjct: 265 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 310
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 32/234 (13%)
Query: 1 MMSRVKHDNLVKFLGACKD--PLMVIVTELLPGMSLRKYLVS-------------LRPNK 45
+++ ++H ++V+F G C + PL+++ + G L ++L S + P
Sbjct: 73 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAPGP 131
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L L L A +A M L +HRDL N L+ +K+ DFG++R
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTDY 190
Query: 106 XXXXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMS 161
RWM PE ++ R+ + + DV+SFG+VLWE+ T + P+ +S
Sbjct: 191 YRVGGRTMLPIRWMPPE---SILYRK-----FTTESDVWSFGVVLWEIFTYGKQPWYQLS 242
Query: 162 NLQAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 214
N +A R P P++ I++ CW +P R S + L A
Sbjct: 243 NTEA--IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 127
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 128 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 186
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 187 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 238
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 239 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 287
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 125
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 185 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++S+ + K+ G+ KD + I+ E L G S L L P LD +I
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREIL 134
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAP 118
+ +D LH+ IHRD+K N+LL+ + +KLADFG+A + WMAP
Sbjct: 135 KGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 193
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ ++ Y++K D++S GI EL P + ++ + K+ P L
Sbjct: 194 EVI--------KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTL 244
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+ S L V++C ++P+ RP+ ++++
Sbjct: 245 EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 128
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 129 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 187
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 188 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 239
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 240 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 288
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 32/226 (14%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 122
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 182 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 233
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 204
F + R P+ ++ I+ CW + N RPSF
Sbjct: 234 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 122
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 182 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 233
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 234 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 129
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 130 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 188
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 189 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 240
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 241 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 289
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA-HAERIDHIKLLQYTSQ 125
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 185 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 32/226 (14%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 120
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 121 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 180 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 231
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSF 204
F + R P+ ++ I+ CW + N RPSF
Sbjct: 232 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 277
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 121
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 122 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 181 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 232
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 233 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 281
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 126
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 127 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 185
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 186 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 237
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 238 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 286
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 140
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 200 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 251
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 252 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 140
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 200 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 251
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 252 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++S+ + K+ G+ KD + I+ E L G S L L P LD +I
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREIL 129
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAP 118
+ +D LH+ IHRD+K N+LL+ + +KLADFG+A + WMAP
Sbjct: 130 KGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 188
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ ++ Y++K D++S GI EL P + ++ + K+ P L
Sbjct: 189 EVI--------KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTL 239
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+ S L V++C ++P+ RP+ ++++
Sbjct: 240 EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++S+ + K+ G+ KD + I+ E L G S L L P LD +I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREIL 114
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAP 118
+ +D LH+ IHRD+K N+LL+ + +KLADFG+A + WMAP
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 173
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ ++ Y++K D++S GI EL P + ++ + K+ P L
Sbjct: 174 EVI--------KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTL 224
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+ S L V++C ++P+ RP+ ++++
Sbjct: 225 EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+VK + + + +V E G + YLV+ ++ A I
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIV 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H I+HRDLK +NLLL D ++K+ADFG + + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
L+ QG KK+ +VDV+S G++L+ L++ LPF+G NL+ + + +P
Sbjct: 183 LF------QG-KKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIP 233
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+S D +++ + +P+ R + QI++
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+VK + + + +V E G + YLV+ ++ A I
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIV 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H I+HRDLK +NLLL D ++K+ADFG + + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
L+ QG KK+ +VDV+S G++L+ L++ LPF+G NL+ + + +P
Sbjct: 183 LF------QG-KKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIP 233
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+S D +++ + +P+ R + QI++
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+VK + + + +V E G + YLV+ ++ A I
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIV 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H I+HRDLK +NLLL D ++K+ADFG + + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
L+ QG KK+ +VDV+S G++L+ L++ LPF+G NL+ + + +P
Sbjct: 183 LF------QG-KKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIP 233
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+S D +++ + +P+ R + QI++
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+VK + + + +V E G + YLV+ ++ A I
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIV 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H I+HRDLK +NLLL D ++K+ADFG + + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
L+ QG KK+ +VDV+S G++L+ L++ LPF+G NL+ + + +P
Sbjct: 183 LF------QG-KKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIP 233
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+S D +++ + +P+ R + QI++
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 15/211 (7%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++S+ + K+ G+ K + I+ E L G S L LR D +I
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSA---LDLLRAGPFDEFQIATMLKEIL 130
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAP 118
+ +D LH+ IHRD+K N+LL+ +Q +KLADFG+A + WMAP
Sbjct: 131 KGLDYLHSEKKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 189
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ ++ Y++K D++S GI EL P M ++ + K+ P L
Sbjct: 190 EVI--------QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP-KNNPPTL 240
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
D + + +C +DP+ RP+ ++++
Sbjct: 241 VGDFTKSFKEFIDACLNKDPSFRPTAKELLK 271
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+VK + + + +V E G + YLV+ ++ A I
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIV 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H I+HRDLK +NLLL D ++K+ADFG + + APE
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
L+ QG KK+ +VDV+S G++L+ L++ LPF+G NL+ + + +P
Sbjct: 183 LF------QG-KKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIP 233
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+S D +++ + +P+ R + QI++
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++S+ + K+ G+ KD + I+ E L G S L L P LD +I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREIL 114
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAP 118
+ +D LH+ IHRD+K N+LL+ + +KLADFG+A + WMAP
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 173
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ ++ Y++K D++S GI EL P + ++ + K+ P L
Sbjct: 174 EVI--------KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-KNNPPTL 224
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+ S L V++C ++P+ RP+ ++++
Sbjct: 225 EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 10 LVKFLGAC-KDPLMVIVTELLPGM--SLRKYLVSLRPNKLDLHVALNFALDIARAMDCLH 66
+V+F GA ++ I EL+ KY+ S+ + + + L +A++ L
Sbjct: 83 IVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK 142
Query: 67 AN-GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 125
N IIHRD+KP N+LL ++KL DFG++ +MAPE
Sbjct: 143 ENLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 201
Query: 126 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL----PED 181
RQG Y+ + DV+S GI L+EL T R P+ +++ K P L +
Sbjct: 202 SRQG----YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEERE 257
Query: 182 ISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
SP V C +D + RP + ++++
Sbjct: 258 FSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 122
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHRDL N+L+ ++ +K+ DFGL +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 182 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 233
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 234 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+VK + + + ++ E G + YLV+ ++ A + I
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIV 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H I+HRDLK +NLLL D ++K+ADFG + + APE
Sbjct: 122 SAVQYCHQKRIVHRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPE 180
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
L+ QG KK+ +VDV+S G++L+ L++ LPF+G NL+ + + +P
Sbjct: 181 LF------QG-KKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIP 231
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII--RMLNA 213
+S D +++ V +P R + QI+ R +NA
Sbjct: 232 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 267
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+VK + + + ++ E G + YLV+ ++ A + I
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIV 124
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H I+HRDLK +NLLL D ++K+ADFG + + APE
Sbjct: 125 SAVQYCHQKRIVHRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE 183
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
L+ QG KK+ +VDV+S G++L+ L++ LPF+G NL+ + + +P
Sbjct: 184 LF------QG-KKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIP 234
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII--RMLNA 213
+S D +++ V +P R + QI+ R +NA
Sbjct: 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 270
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 1 MMSRVKHDNLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + H++++K+ G C+D + +V E +P SLR YL + + L L FA
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQ 125
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I M LH+ IHR+L N+LL D + +K+ DFGLA+ YR
Sbjct: 126 ICEGMAYLHSQHYIHRNLAARNVLLDND-RLVKIGDFGLAK------AVPEGHEYYRVRE 178
Query: 115 -------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNR----------LPF 157
W APE E K Y DV+SFG+ L+ELLT+ L
Sbjct: 179 DGDSPVFWYAPECLK-------EYKFYYAS-DVWSFGVTLYELLTHCDSSQSPPTKFLEL 230
Query: 158 EGMSNLQAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA 213
G++ Q + G P+ ++ ++++CW + + RP+F +I +L
Sbjct: 231 IGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKT 290
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 7 HDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMD 63
H ++V F G +D + +V EL R+ L+ L R L A + I
Sbjct: 80 HQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 135
Query: 64 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYS 122
LH N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 136 YLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 194
Query: 123 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 182
KK ++ +VDV+S G +++ LL + PFE S L+ Y K +P+ I
Sbjct: 195 --------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETY-LRIKKNEYSIPKHI 244
Query: 183 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 217
+P A ++Q DP RP+ ++ +LN FT
Sbjct: 245 NPVAASLIQKMLQTDPTARPTINE---LLNDEFFT 276
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 7 HDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMD 63
H ++V F G +D + +V EL R+ L+ L R L A + I
Sbjct: 74 HQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 129
Query: 64 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYS 122
LH N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 130 YLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 188
Query: 123 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 182
KK ++ +VDV+S G +++ LL + PFE S L+ Y K +P+ I
Sbjct: 189 --------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETY-LRIKKNEYSIPKHI 238
Query: 183 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 217
+P A ++Q DP RP+ ++ +LN FT
Sbjct: 239 NPVAASLIQKMLQTDPTARPTINE---LLNDEFFT 270
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL- 56
++ ++ H N+VK ++ V++ E P SL Y V P+ F +
Sbjct: 60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPESEFLIV 117
Query: 57 --DIARAMDCLHANGIIHRDLKPDNLL--LTPDQKSL-KLADFGLARXXXXXXXXXXXXX 111
D+ M+ L NGI+HR++KP N++ + D +S+ KL DFG AR
Sbjct: 118 LRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYG 177
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++ P++Y LR+ +K Y VD++S G+ + T LPF
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 7 HDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMD 63
H ++V F G +D + +V EL R+ L+ L R L A + I
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 131
Query: 64 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYS 122
LH N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 132 YLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 123 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 182
KK ++ +VDV+S G +++ LL + PFE S L+ Y K +P+ I
Sbjct: 191 --------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETY-LRIKKNEYSIPKHI 240
Query: 183 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 217
+P A ++Q DP RP+ ++ +LN FT
Sbjct: 241 NPVAASLIQKMLQTDPTARPTINE---LLNDEFFT 272
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 7 HDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMD 63
H ++V F G +D + +V EL R+ L+ L R L A + I
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 131
Query: 64 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYS 122
LH N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 132 YLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 123 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 182
KK ++ +VDV+S G +++ LL + PFE S L+ Y K+ +P+ I
Sbjct: 191 --------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEY-SIPKHI 240
Query: 183 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 217
+P A ++Q DP RP+ ++ +LN FT
Sbjct: 241 NPVAASLIQKMLQTDPTARPTINE---LLNDEFFT 272
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 7 HDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMD 63
H ++V F G +D + +V EL R+ L+ L R L A + I
Sbjct: 98 HQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 153
Query: 64 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYS 122
LH N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 154 YLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 212
Query: 123 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 182
KK ++ +VDV+S G +++ LL + PFE S L+ Y K+ +P+ I
Sbjct: 213 --------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEY-SIPKHI 262
Query: 183 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 217
+P A ++Q DP RP+ ++ +LN FT
Sbjct: 263 NPVAASLIQKMLQTDPTARPTINE---LLNDEFFT 294
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL- 56
++ ++ H N+VK ++ V++ E P SL Y V P+ F +
Sbjct: 60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL--YTVLEEPSNAYGLPESEFLIV 117
Query: 57 --DIARAMDCLHANGIIHRDLKPDNLL--LTPDQKSL-KLADFGLARXXXXXXXXXXXXX 111
D+ M+ L NGI+HR++KP N++ + D +S+ KL DFG AR
Sbjct: 118 LRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYG 177
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++ P++Y LR+ +K Y VD++S G+ + T LPF
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 25/225 (11%)
Query: 1 MMSRVKHDNLVKFLGA---CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFA 55
+M + H N++ G CK P+M+I TE + SL +L R N V +
Sbjct: 68 IMGQFDHPNIIHLEGVVTKCK-PVMII-TEYMENGSLDAFL---RKNDGRFTVIQLVGML 122
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXX 111
I M L +HRDL N+L+ + K++DFG++R
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKI 181
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAA 170
RW APE + + + + DV+S+GIV+WE+++ P+ MSN Q A
Sbjct: 182 PIRWTAPEAIAY--------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAI 232
Query: 171 FKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ R P D L ++ CW ++ + RP F QI+ ML+ +
Sbjct: 233 EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 7 HDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSL--RPNKLDLHVALNFALDIARAMD 63
H ++V F G +D + +V EL R+ L+ L R L A + I
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 155
Query: 64 CLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYS 122
LH N +IHRDLK NL L D + +K+ DFGLA + ++APE+ S
Sbjct: 156 YLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 214
Query: 123 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI 182
KK ++ +VDV+S G +++ LL + PFE S L+ Y K+ +P+ I
Sbjct: 215 --------KKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEY-SIPKHI 264
Query: 183 SPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 217
+P A ++Q DP RP+ ++ +LN FT
Sbjct: 265 NPVAASLIQKMLQTDPTARPTINE---LLNDEFFT 296
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 25/225 (11%)
Query: 1 MMSRVKHDNLVKFLGA---CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFA 55
+M + H N++ G CK P+M+I TE + SL +L R N V +
Sbjct: 83 IMGQFDHPNIIHLEGVVTKCK-PVMII-TEYMENGSLDAFL---RKNDGRFTVIQLVGML 137
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXX 111
I M L +HRDL N+L+ + K++DFG++R
Sbjct: 138 RGIGSGMKYLSDMSAVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKI 196
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAA 170
RW APE + + + + DV+S+GIV+WE+++ P+ MSN Q A
Sbjct: 197 PIRWTAPEAIAY--------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAI 247
Query: 171 FKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ R P D L ++ CW ++ + RP F QI+ ML+ +
Sbjct: 248 EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 292
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 25/225 (11%)
Query: 1 MMSRVKHDNLVKFLGA---CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFA 55
+M + H N++ G CK P+M+I TE + SL +L R N V +
Sbjct: 62 IMGQFDHPNIIHLEGVVTKCK-PVMII-TEYMENGSLDAFL---RKNDGRFTVIQLVGML 116
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXX 111
I M L +HRDL N+L+ + K++DFG++R
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKI 175
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAA 170
RW APE + + + + DV+S+GIV+WE+++ P+ MSN Q A
Sbjct: 176 PIRWTAPEAIAY--------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAI 226
Query: 171 FKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ R P D L ++ CW ++ + RP F QI+ ML+ +
Sbjct: 227 EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +++H+NLV L CK +V E + L + L PN LD V + I
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDD--LELFPNGLDYQVVQKYLFQII 134
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ H++ IIHRD+KP+N+L++ +KL DFG AR RW AP
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 167
EL G+ K Y VDV++ G ++ E+ F G S++ Y
Sbjct: 194 ELLV------GDVK-YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 5 VKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
++H +++K P +++ G L Y+V + ++ F I A++
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEY 123
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
H + I+HRDLKP+NLLL D ++K+ADFGL+ + APE+ +
Sbjct: 124 CHRHKIVHRDLKPENLLLD-DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING- 181
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPG---LP 179
K + +VDV+S GIVL+ +L RLPF E + NL FK +P
Sbjct: 182 ------KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------FKKVNSCVYVMP 228
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+ +SP +++ V DP R + +I R
Sbjct: 229 DFLSPGAQSLIRRMIVADPMQRITIQEIRR 258
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 12/146 (8%)
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX-XXYRW 115
++A +D LH+ GII+RDLKP+N+LL ++ +KL DFGL++ +
Sbjct: 138 ELALGLDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEY 196
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR 175
MAPE V RQG +++ D +S+G++++E+LT LPF+G + A+
Sbjct: 197 MAPE----VVNRQG----HSHSADWWSYGVLMFEMLTGSLPFQGKDRKET--MTLILKAK 246
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLR 201
G+P+ +S + ++++ + +P R
Sbjct: 247 LGMPQFLSTEAQSLLRALFKRNPANR 272
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 32/229 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPL---MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ ++HDN+VK+ G C + ++ E LP SLR YL + ++D L +
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQ 123
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L IHR+L N+L+ ++ +K+ DFGL +
Sbjct: 124 ICKGMEYLGTKRYIHRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 182
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-----NRLPFEGM---SNLQA 165
W APE + + ++ DV+SFG+VL+EL T P E M N +
Sbjct: 183 FWYAPESLT--------ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 234
Query: 166 AYAAAF-------KHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F + R P+ ++ I+ CW + N RPSF +
Sbjct: 235 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 283
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 19/222 (8%)
Query: 1 MMSRVKHDNLVKFLGACK--DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
+M + H N+V G P+M+++ E + +L +L + + + I
Sbjct: 97 IMGQFDHPNVVHLEGVVTRGKPVMIVI-EFMENGALDAFLRK-HDGQFTVIQLVGMLRGI 154
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX----XXXXXXXXXXXYR 114
A M L G +HRDL N+L+ + K++DFGL+R R
Sbjct: 155 AAGMRYLADMGYVHRDLAARNILVNSNL-VCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAAFKH 173
W APE + + + + DV+S+GIV+WE+++ P+ MSN A +
Sbjct: 214 WTAPEAI--------QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 265
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
P P D L ++ CW ++ RP F QI+ +L+ +
Sbjct: 266 RLPA-PMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMI 306
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ V E L G L ++ S +K DL A +A +I + LH+ GI++RDLK DN+L
Sbjct: 94 LFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 151
Query: 82 LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKHYNNKVDV 140
L D +K+ADFG+ + ++APE+ G+K YN+ VD
Sbjct: 152 LDKD-GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL------GQK--YNHSVDW 202
Query: 141 YSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 200
+SFG++L+E+L + PF G + ++ + P P + + ++ +V +P
Sbjct: 203 WSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWLEKEAKDLLVKLFVREPEK 260
Query: 201 RPSFSQIIR 209
R IR
Sbjct: 261 RLGVRGDIR 269
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 1 MMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+++ +KH N+V++ + ++ + IV + G L K + + + L++ + I
Sbjct: 76 VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAP 118
A+ +H I+HRD+K N+ LT D +++L DFG+AR +++P
Sbjct: 136 LALKHVHDRKILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG--MSNLQAAYAAAFKHARP 176
E+ E K YNNK D+++ G VL+EL T + FE M NL + + P
Sbjct: 195 EI--------CENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG---SFP 243
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ S DL +V + +P RPS + I+
Sbjct: 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVA--LNFALD 57
+M + H N++ G K ++I+TE + SL +L R N V +
Sbjct: 61 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRG 117
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----- 112
IA M L +HR L N+L+ + K++DFGL+R
Sbjct: 118 IAAGMKYLADMNYVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
Query: 113 -YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNLQAAYAAA 170
RW APE + + + + DV+S+GIV+WE+++ P+ M+N Q A
Sbjct: 177 PIRWTAPEAI--------QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-QDVINAI 227
Query: 171 FKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ R P D L ++ CW +D N RP F QI+ L+ +
Sbjct: 228 EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+VK + + + +V E G + YLV+ K + F I
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMK-EKEARAKFR-QIV 116
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H I+HRDLK +NLLL D ++K+ADFG + + APE
Sbjct: 117 SAVQYCHQKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 175
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
L+ QG KK+ +VDV+S G++L+ L++ LPF+G NL+ + + +P
Sbjct: 176 LF------QG-KKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIP 226
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+S D +++ + +P+ R + QI++
Sbjct: 227 FYMSTDCENLLKKFLILNPSKRGTLEQIMK 256
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 1 MMSRVKHDNLVKFLGAC--KDPLMVIVTELLPGMSLRKYLVSLRPN-----------KLD 47
+++ ++H+++VKF G C DPL ++V E + L K+L + P+ +L
Sbjct: 68 LLTNLQHEHIVKFYGVCVEGDPL-IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 48 LHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXX 107
L+ A IA M L + +HRDL N L+ + +K+ DFG++R
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG-ENLLVKIGDFGMSRDVYSTDYYR 185
Query: 108 XXXXX---YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT-NRLPFEGMSNL 163
RWM PE ++ R+ + + DV+S G+VLWE+ T + P+ +SN
Sbjct: 186 VGGHTMLPIRWMPPE---SIMYRK-----FTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 237
Query: 164 QAAYAAAFKHARP-GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS 222
+ R P ++ ++ CW +P++R + I+ ++ L L S
Sbjct: 238 EV--IECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKN----IKGIHTLLQNLAKAS 291
Query: 223 P 223
P
Sbjct: 292 P 292
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 14/189 (7%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ V E L G L ++ S +K DL A +A +I + LH+ GI++RDLK DN+L
Sbjct: 93 LFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 150
Query: 82 LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKHYNNKVDV 140
L D +K+ADFG+ + ++APE+ G+K YN+ VD
Sbjct: 151 LDKD-GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL------GQK--YNHSVDW 201
Query: 141 YSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 200
+SFG++L+E+L + PF G + ++ + P P + + ++ +V +P
Sbjct: 202 WSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWLEKEAKDLLVKLFVREPEK 259
Query: 201 RPSFSQIIR 209
R IR
Sbjct: 260 RLGVRGDIR 268
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
M+S V H +++ G +D + ++ + + G L L + + VA +A ++
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAAEVC 116
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A++ LH+ II+RDLKP+N+LL + +K+ DFG A+ Y +APE
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKN-GHIKITDFGFAKYVPDVTYXLCGTPDY--IAPE 173
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ ST K YN +D +SFGI+++E+L PF
Sbjct: 174 VVST--------KPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 33/235 (14%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNK----LDLHVALNFA 55
+ +R++H N+V LG KD + ++ L ++LV P+ D + A
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 56 LD----------IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L+ IA M+ L ++ ++H+DL N+L+ D+ ++K++D GL R
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY-DKLNVKISDLGLFREVYAADY 183
Query: 106 XXXXXXX---YRWMAPE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFEG 159
RWMAPE +Y ++ D++S+G+VLWE+ + L P+ G
Sbjct: 184 YKLLGNSLLPIRWMAPEAIMYGKFSIDS----------DIWSYGVVLWEVFSYGLQPYCG 233
Query: 160 MSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 214
SN + P P+D + ++ CW E P+ RP F I L A+
Sbjct: 234 YSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 287
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 35/236 (14%)
Query: 1 MMSRVKHDNLVKFLGAC-KD-PLMVIVTELLPGMSLRKYLVSLRPNK----LDLHVALNF 54
+ +R++H N+V LG KD PL +I + G L ++LV P+ D +
Sbjct: 82 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG-DLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 55 ALD----------IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXX 104
AL+ IA M+ L ++ ++H+DL N+L+ D+ ++K++D GL R
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY-DKLNVKISDLGLFREVYAAD 199
Query: 105 XXXXXXXX---YRWMAPE--LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL-PFE 158
RWMAPE +Y ++ D++S+G+VLWE+ + L P+
Sbjct: 200 YYKLLGNSLLPIRWMAPEAIMYGKFSIDS----------DIWSYGVVLWEVFSYGLQPYC 249
Query: 159 GMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAF 214
G SN + P P+D + ++ CW E P+ RP F I L A+
Sbjct: 250 GYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 24 IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLT 83
++ E L G +L + +R N+ + L +A+ LHA G+IHRD+K D++LLT
Sbjct: 119 VLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL---QALAYLHAQGVIHRDIKSDSILLT 175
Query: 84 PDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYS 142
D + +KL+DFG A+ WMAPE+ S + Y +VD++S
Sbjct: 176 LDGR-VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVIS--------RSLYATEVDIWS 226
Query: 143 FGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP------EDISPDLAFIVQSCWVE 196
GI++ E++ P+ S +Q A K R P +SP L ++ V
Sbjct: 227 LGIMVIEMVDGEPPYFSDSPVQ-----AMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVR 281
Query: 197 DPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
DP R + +++ + FL P VP
Sbjct: 282 DPQERATAQELLD--HPFLLQTGLPECLVP 309
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N++K +D +VTE G L + +++ +K D A N I
Sbjct: 99 LLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQIL 156
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMA 117
+ LH + I+HRD+KP+N+LL ++K+ DFGL+ ++A
Sbjct: 157 SGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIA 216
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
PE+ KK YN K DV+S G++++ LL PF G ++
Sbjct: 217 PEVL---------KKKYNEKCDVWSCGVIMYILLCGYPPFGGQND 252
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 22/225 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
MMS++ H +LV G C ++V E + SL YL + N +++ L A +A
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLA 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLT--PDQKS-----LKLADFGLARXXXXXXXXXXXXXX 112
AM L N +IH ++ N+LL D+K+ +KL+D G++
Sbjct: 124 AAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS---ITVLPKDILQER 180
Query: 113 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 172
W+ PE K+ N D +SFG LWE+ + + +S L + F
Sbjct: 181 IPWVPPECIEN-------PKNLNLATDKWSFGTTLWEICSG--GDKPLSALDSQRKLQFY 231
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 217
R LP + +LA ++ +C +P+ RPSF IIR LN+ LFT
Sbjct: 232 EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS-LFT 275
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + H N+VK + + + +V E G + YLV+ ++ A I
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIV 124
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H I+HRDLK +NLLL D ++K+ADFG + + APE
Sbjct: 125 SAVQYCHQKYIVHRDLKAENLLLDGDM-NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPE 183
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
L+ QG KK+ +VDV+S G++L+ L++ LPF+G NL+ + + +P
Sbjct: 184 LF------QG-KKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELRERVLR-GKYRIP 234
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+S D +++ V +P R S QI++
Sbjct: 235 FYMSTDCENLLKKLLVLNPIKRGSLEQIMK 264
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L M L+K++ + + L + ++ +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP+NLL+ + ++KLADFGLAR W AP
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 176 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 225
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 226 PDE-------VVWPGVTSMPDYKPSFPKWAR 249
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++S+ + ++ G+ K + I+ E L G S L L+P L+ +I
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSA---LDLLKPGPLEETYIATILREIL 126
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAP 118
+ +D LH+ IHRD+K N+LL+ +Q +KLADFG+A + WMAP
Sbjct: 127 KGLDYLHSERKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 185
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ ++ Y+ K D++S GI EL P + ++ + K++ P L
Sbjct: 186 EVI--------KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-KNSPPTL 236
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
S V++C +DP RP+ ++++
Sbjct: 237 EGQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 7 HDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 65
H N+VK + + + +V E G + YLV+ K + F I A+
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK-EKEARAKFR-QIVSAVQYC 129
Query: 66 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 125
H I+HRDLK +NLLL D ++K+ADFG + + APEL+
Sbjct: 130 HQKFIVHRDLKAENLLLDADX-NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF---- 184
Query: 126 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPD 185
QG KK+ +VDV+S G++L+ L++ LPF+G NL+ + + +P S D
Sbjct: 185 --QG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLR-GKYRIPFYXSTD 239
Query: 186 LAFIVQSCWVEDPNLRPSFSQIIR 209
+++ + +P+ R + QI +
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIXK 263
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 22/225 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
MMS++ H +LV G C ++V E + SL YL + N +++ L A +A
Sbjct: 65 MMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLA 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLT--PDQKS-----LKLADFGLARXXXXXXXXXXXXXX 112
AM L N +IH ++ N+LL D+K+ +KL+D G++
Sbjct: 124 WAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS---ITVLPKDILQER 180
Query: 113 YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 172
W+ PE K+ N D +SFG LWE+ + + +S L + F
Sbjct: 181 IPWVPPECIEN-------PKNLNLATDKWSFGTTLWEICSG--GDKPLSALDSQRKLQFY 231
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFT 217
R LP + +LA ++ +C +P+ RPSF IIR LN+ LFT
Sbjct: 232 EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS-LFT 275
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 18/242 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ ++ H N++K +D IV EL G L ++ + + H A +
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII--KRKRFSEHDAARIIKQVF 131
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMA 117
+ +H + I+HRDLKP+N+LL +K +K+ DFGL+ ++A
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIA 191
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ + Y+ K DV+S G++L+ LL+ PF G +
Sbjct: 192 PEVL---------RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 178 LPE--DISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAA 235
LP+ IS D +++ P+LR + +Q + + ++ +P++ + + E+A
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE--HPWIQKYSSETPTISDLPSLESAM 300
Query: 236 TS 237
T+
Sbjct: 301 TN 302
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L M L+K++ + + L + ++ +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP+NLL+ + ++KLADFGLAR W AP
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 174 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 223
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 224 PDE-------VVWPGVTSMPDYKPSFPKWAR 247
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 6 KHDNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+H N+V+ + C ++ + +V E + LR YL P L +
Sbjct: 72 EHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
R +D LHAN I+HRDLKP+N+L+T ++KLADFGLAR + APE
Sbjct: 131 RGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPE 189
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
+ T Y VD++S G + E+ + F G S
Sbjct: 190 VLLQST--------YATPVDMWSVGCIFAEMFRRKPLFCGNSE 224
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 6 KHDNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+H N+V+ + C ++ + +V E + LR YL P L +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
R +D LHAN I+HRDLKP+N+L+T ++KLADFGLAR + APE
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPE 181
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
+ T Y VD++S G + E+ + F G S
Sbjct: 182 VLLQST--------YATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 33/231 (14%)
Query: 2 MSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMS---LRKYLVSLRPNK---LDLHVALN 53
MS+ H N+V + + KD L +V +LL G S + K++V+ +K LD
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 125
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
++ ++ LH NG IHRD+K N+LL D S+++ADFG++
Sbjct: 126 ILREVLEGLEYLHKNGQIHRDVKAGNILLGED-GSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 114 R------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 167
WMAPE+ V + Y+ K D++SFGI EL T P+ ++
Sbjct: 185 TFVGTPCWMAPEVMEQV-------RGYDFKADIWSFGITAIELATGAAPYHKYPPMK-VL 236
Query: 168 AAAFKHARPGLPEDI---------SPDLAFIVQSCWVEDPNLRPSFSQIIR 209
++ P L + ++ C +DP RP+ ++++R
Sbjct: 237 MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 6 KHDNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+H N+V+ + C ++ + +V E + LR YL P L +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
R +D LHAN I+HRDLKP+N+L+T ++KLADFGLAR + APE
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPE 181
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
+ T Y VD++S G + E+ + F G S
Sbjct: 182 VLLQST--------YATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P + K L L +K D + ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELA 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 181
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 182 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 231
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 6 KHDNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+H N+V+ + C ++ + +V E + LR YL P L +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
R +D LHAN I+HRDLKP+N+L+T ++KLADFGLAR + APE
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPE 181
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
+ T Y VD++S G + E+ + F G S
Sbjct: 182 VLLQST--------YATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXX 109
A F + + LH N +IHRDLK NL L D +K+ DFGLA +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKTL 202
Query: 110 XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA 169
++APE+ KK ++ +VD++S G +L+ LL + PFE S L+ Y
Sbjct: 203 CGTPNYIAPEVLC--------KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETY-I 252
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
K +P I+P + +++ DP LRPS ++++
Sbjct: 253 RIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 33/231 (14%)
Query: 2 MSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMS---LRKYLVSLRPNK---LDLHVALN 53
MS+ H N+V + + KD L +V +LL G S + K++V+ +K LD
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 120
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
++ ++ LH NG IHRD+K N+LL D S+++ADFG++
Sbjct: 121 ILREVLEGLEYLHKNGQIHRDVKAGNILLGED-GSVQIADFGVSAFLATGGDITRNKVRK 179
Query: 114 R------WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 167
WMAPE+ V + Y+ K D++SFGI EL T P+ ++
Sbjct: 180 TFVGTPCWMAPEVMEQV-------RGYDFKADIWSFGITAIELATGAAPYHKYPPMK-VL 231
Query: 168 AAAFKHARPGLPEDI---------SPDLAFIVQSCWVEDPNLRPSFSQIIR 209
++ P L + ++ C +DP RP+ ++++R
Sbjct: 232 MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P + K L L +K D + ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELA 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPE 181
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 182 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 231
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXX 109
A F + + LH N +IHRDLK NL L D +K+ DFGLA +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKXL 202
Query: 110 XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA 169
++APE+ KK ++ +VD++S G +L+ LL + PFE S L+ Y
Sbjct: 203 CGTPNYIAPEVLC--------KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETY-I 252
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
K +P I+P + +++ DP LRPS ++++
Sbjct: 253 RIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXX 109
A F + + LH N +IHRDLK NL L D +K+ DFGLA +
Sbjct: 128 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDL 186
Query: 110 XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA 169
++APE+ KK ++ +VD++S G +L+ LL + PFE S L+ Y
Sbjct: 187 CGTPNYIAPEVLC--------KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIR 237
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
K+ +P I+P + +++ DP LRPS ++++
Sbjct: 238 IKKNEY-SVPRHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXX 109
A F + + LH N +IHRDLK NL L D +K+ DFGLA +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDL 202
Query: 110 XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA 169
++APE+ KK ++ +VD++S G +L+ LL + PFE S L+ Y
Sbjct: 203 CGTPNYIAPEVLC--------KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETY-I 252
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
K +P I+P + +++ DP LRPS ++++
Sbjct: 253 RIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNAM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 16/214 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ ++ H N++K +D IV EL G L ++ + + H A +
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII--KRKRFSEHDAARIIKQVF 131
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMA 117
+ +H + I+HRDLKP+N+LL +K +K+ DFGL+ ++A
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIA 191
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ + Y+ K DV+S G++L+ LL+ PF G +
Sbjct: 192 PEVL---------RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 178 LPE--DISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
LP+ IS D +++ P+LR + +Q +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 76 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 125 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLARHTDDEMT 182
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 183 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 80 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 129 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLARHTDDEMT 186
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 187 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 16/214 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ ++ H N++K +D IV EL G L ++ + + H A +
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII--KRKRFSEHDAARIIKQVF 131
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMA 117
+ +H + I+HRDLKP+N+LL +K +K+ DFGL+ ++A
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIA 191
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ + Y+ K DV+S G++L+ LL+ PF G +
Sbjct: 192 PEVL---------RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 178 LPE--DISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
LP+ IS D +++ P+LR + +Q +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 79 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 128 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMT 185
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 186 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 79 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 128 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMT 185
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 186 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 144
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 145 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 202
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 203 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 252
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 119
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPE 177
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 178 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 227
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 85 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 134 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLARHTDDEMT 191
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 192 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 240
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYL----VSLRPNKLDLHVALNFA 55
+M +KH+N+V+ + + +V E + L+KY+ V P L+L++ F
Sbjct: 56 LMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 115
+ + + H N I+HRDLKP NLL+ + LKL DFGLAR W
Sbjct: 115 WQLLQGLAFCHENKILHRDLKPQNLLIN-KRGQLKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
Y + G + Y+ +D++S G +L E++T + F G ++
Sbjct: 174 -----YRAPDVLMGSRT-YSTSIDIWSCGCILAEMITGKPLFPGTND 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 118
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 177 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 226
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 179
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 180 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 229
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 1 MMSRVKHDNLVKFL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVA 51
+M ++ H N+V+ G KD + + +V + +P R ++ + ++V
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVK 125
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L + + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 126 L-YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 185 SRYYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 181
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 182 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 231
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 81 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 130 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTADEMT 187
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 188 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 81 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 130 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTADEMT 187
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 188 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Query: 1 MMSRVKHDNLVKFL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVA 51
+M ++ H N+V+ G KD + + +V + +P R ++ + ++V
Sbjct: 94 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 153
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L + + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 154 L-YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 212
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 213 SRYYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 257
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 118
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 177 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 226
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 60 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 117
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 118 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 175
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 176 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 225
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 226 DFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 122
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 180
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 181 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 230
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 231 DFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Query: 1 MMSRVKHDNLVKFL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVA 51
+M ++ H N+V+ G KD + + +V + +P R ++ + ++V
Sbjct: 104 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 163
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L + + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 164 L-YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 222
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 223 SRYYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 267
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Query: 1 MMSRVKHDNLVKFL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVA 51
+M ++ H N+V+ G KD + + +V + +P R ++ + ++V
Sbjct: 100 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L + + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 160 L-YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 219 SRYYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 1 MMSRVKHDNLVKFL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVA 51
+M ++ H N+V+ G KD + + +V + +P R ++ + ++V
Sbjct: 100 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L + + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 160 L-YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 218
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 219 SRYYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Query: 1 MMSRVKHDNLVKFL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVA 51
+M ++ H N+V+ G KD + + +V + +P R ++ + ++V
Sbjct: 145 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 204
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L + + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 205 L-YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 263
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 264 SRYYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 308
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 135
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 136 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 193
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 194 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 243
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 244 DFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 181
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 182 XI--------EGRXHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 231
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 81 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 130 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTADEMT 187
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 188 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Query: 1 MMSRVKHDNLVKFL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVA 51
+M ++ H N+V+ G KD + + +V + +P R ++ + ++V
Sbjct: 102 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 161
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L + + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 162 L-YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 220
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 221 SRYYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE 179
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 180 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 229
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 1 MMSRVKHDNLVKFLG------ACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNF 54
++ +KH+N++ L + +D V + L G L + S + D HV
Sbjct: 80 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALS--DEHVQF-L 136
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR 114
+ R + +H+ GIIHRDLKP N+ + D + L++ DFGLAR YR
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSE-LRILDFGLARQADEEMTGYVATRWYR 195
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE+ HYN VD++S G ++ ELL + F G
Sbjct: 196 --APEIMLNWM-------HYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 81 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 130 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 187
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 188 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 236
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 58 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 115
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 116 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 173
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 174 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 223
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 224 DFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 179
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 180 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 229
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 28/172 (16%)
Query: 1 MMSRVKHDNLVK-------FLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL- 52
+M ++ H N+V + L ++ E G LRKYL N+ + L
Sbjct: 66 IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-----NQFENCCGLK 120
Query: 53 -----NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSL--KLADFGLARXXXXXXX 105
DI+ A+ LH N IIHRDLKP+N++L P + L K+ D G A+
Sbjct: 121 EGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+++APEL E+K Y VD +SFG + +E +T PF
Sbjct: 181 CTEFVGTLQYLAPELL--------EQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 21/145 (14%)
Query: 21 LMVIVTELLPGMSLRKYLVSLRPNKLDLHVAL------NFALDIARAMDCLHANGIIHRD 74
L ++ E G LRKYL N+ + L DI+ A+ LH N IIHRD
Sbjct: 92 LPLLAMEYCEGGDLRKYL-----NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRD 146
Query: 75 LKPDNLLLTPDQKSL--KLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKK 132
LKP+N++L P + L K+ D G A+ +++APEL E+K
Sbjct: 147 LKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL--------EQK 198
Query: 133 HYNNKVDVYSFGIVLWELLTNRLPF 157
Y VD +SFG + +E +T PF
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 76 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 125 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 182
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 183 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 118
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 177 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 226
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 84 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 132
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 133 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 190
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 191 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 239
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGL R
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLCRHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 86 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 135 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 192
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 193 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 1 MMSRVKHDNLVKFL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVA 51
+M ++ H N+V+ G KD + + +V + +P R ++ + ++V
Sbjct: 78 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L + + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 138 L-YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 197 SRYYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 241
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 86 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 135 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 192
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 193 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 86 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 135 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 192
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 193 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 241
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 79 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 128 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 185
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 186 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 73 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 121
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 122 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 179
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 180 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 228
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 118
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 177 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 226
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Query: 1 MMSRVKHDNLVKFL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVA 51
+M ++ H N+V+ G KD + + +V + +P R ++ + ++V
Sbjct: 71 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 130
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L + + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 131 L-YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 189
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 190 SRYYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 234
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 85 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 134 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 191
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 192 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 76 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 125 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 182
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 183 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 199 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 241
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 123
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE 181
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 182 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 231
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 120
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 121 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPE 178
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 179 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 228
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 94 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 143 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 200
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 201 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 118
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 177 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 226
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 18/236 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 118
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 177 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 226
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAA 235
+ ++ ++ +P+ RP ++ L T PS ++ + AAA
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESAAAA 279
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 119
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPE 177
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 178 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 227
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 119
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE 177
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 178 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 227
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 76 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 125 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 182
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 183 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 70 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 176
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 177 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 118
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 119 NALSYCHSKKVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 177 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQDTY-KRISRVEFTFP 226
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 13 FLGACKDPLMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDIARAMDCLHANGII 71
F D + +V E +PG L + + P K A + ++ A+D +H+ G+I
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKW----AKFYTAEVVLALDAIHSMGLI 196
Query: 72 HRDLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 129
HRD+KPDN+LL LKLADFG + +++PE+ + QG
Sbjct: 197 HRDVKPDNMLLDK-HGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS----QG 251
Query: 130 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP-GLPED 181
+Y + D +S G+ L+E+L PF S L Y+ H PED
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-LVGTYSKIMDHKNSLCFPED 303
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 93 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 142 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 199
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 200 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 248
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 70 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 176
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 177 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 187 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 93 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 142 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 199
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 200 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 248
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 187 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 94 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 143 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 200
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 201 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 97 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 146 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMX 203
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 204 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 252
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 71 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 120 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 177
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 178 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 226
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 194
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 195 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 237
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 205
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 206 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 248
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GXVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 118
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 177 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 226
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 187 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 79 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 128 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 185
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 186 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 234
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 103 LLKHMKHENVIGLLDV-----------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKL 151
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 152 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 209
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 210 GYVATRWYR--APEIMLNWM-------HYNMTVDIWSVGCIMAELLTGRTLFPGTDHI 258
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 187
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 188 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 230
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 80 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 129 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 186
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 187 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 80 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 129 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 186
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 187 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 71 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 120 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 177
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 178 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 80 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 129 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 186
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 187 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 235
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 187 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 97 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 146 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 203
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 204 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 252
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPE 179
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 180 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 229
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 144
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 145 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPE 202
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 203 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 252
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMA 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GFVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMA 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GFVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 72 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 120
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 121 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMT 178
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 179 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 187 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 187 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 190
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 191 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 233
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + R++ +H+ GI HRD+KP NLLL PD LKL DFG A+
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 199
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y + +DV+S G VL ELL + F G S +
Sbjct: 200 YYRAPELIFGAT-------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 242
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 94 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 143 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMX 200
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 201 GXVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 249
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSL-RP-NKLDLHVALNFALD 57
+++ H N+VK L A + + I+ E G ++ ++ L RP + + V LD
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWM 116
A++ LH N IIHRDLK N+L T D +KLADFG+ A+ WM
Sbjct: 147 ---ALNYLHDNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWM 202
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP 176
APE+ V + + Y+ K DV+S GI L E+ P ++ ++ A K P
Sbjct: 203 APEV---VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA-KSEPP 258
Query: 177 GL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
L P S + ++ C ++ + R + SQ+++
Sbjct: 259 TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 70 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMA 176
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 177 GFVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 128/271 (47%), Gaps = 28/271 (10%)
Query: 4 RVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDIARA 61
+++H N+V+ + ++ +V +L+ G L + +V+ ++ D A + I +
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILES 140
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ H+NGI+HR+LKP+NLLL K ++KLADFGLA +++PE
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 200
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAY-AAAFKHARP 176
+ +K Y+ VD+++ G++L+ LL PF E L A A A+ + P
Sbjct: 201 VL--------KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP 252
Query: 177 GLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAAT 236
+ ++P+ ++ S +P R + Q +++ ++ + ++ DT +
Sbjct: 253 EW-DTVTPEAKSLIDSMLTVNPKKRITADQALKV--PWICNRERVASAIHRQDTVD---- 305
Query: 237 SNGAMTEFSARARGKFAFLRQLFTAKRTKNL 267
+ +F+AR + K A L + + NL
Sbjct: 306 ---CLKKFNARRKLKGAILTTMIATRNLSNL 333
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L M L+ ++ + + L + ++ +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLL 116
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 176 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 225
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 226 PDE-------VVWPGVTSMPDYKPSFPKWAR 249
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+ADFG + ++ PE
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPE 179
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 180 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 229
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMA 117
I R + +H+ IIHRDLKP NL + D + LK+ DFGLAR YR A
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMTGYVATRWYR--A 186
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
PE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 187 PEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 225
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP+NLL+ + ++KLADFGLAR W AP
Sbjct: 116 QGLAFCHSHRVLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 175 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 224
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 225 PDE-------VVWPGVTSMPDYKPSFPKWAR 248
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 114 QGLSFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 173 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 222
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 223 PDE-------VVWPGVTSMPDYKPSFPKWAR 246
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSL-RP-NKLDLHVALNFALD 57
+++ H N+VK L A + + I+ E G ++ ++ L RP + + V LD
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWM 116
A++ LH N IIHRDLK N+L T D +KLADFG+ A+ WM
Sbjct: 147 ---ALNYLHDNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDSFIGTPYWM 202
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP 176
APE+ V + + Y+ K DV+S GI L E+ P ++ ++ A K P
Sbjct: 203 APEV---VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA-KSEPP 258
Query: 177 GL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
L P S + ++ C ++ + R + SQ+++
Sbjct: 259 TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP+NLL+ + ++KLADFGLAR W AP
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 174 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 223
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 224 PDE-------VVWPGVTSMPDYKPSFPKWAR 247
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L M L+ ++ + + L + ++ +
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLL 115
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 175 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 224
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 225 PDE-------VVWPGVTSMPDYKPSFPKWAR 248
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 29/255 (11%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+++ H +VK LGA D + I+ E PG ++ ++ L + + + +
Sbjct: 69 ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQML 127
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAP 118
A++ LH+ IIHRDLK N+L+T + ++LADFG+ A+ WMAP
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTL-EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 186
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ T++ Y+ K D++S GI L E+ P ++ ++ A K P L
Sbjct: 187 EVVMCETMKD---TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KSDPPTL 242
Query: 179 --PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAAT 236
P S + ++ ++P RPS +Q++ P V ++ T
Sbjct: 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE------------HPFV-------SSIT 283
Query: 237 SNGAMTEFSARARGK 251
SN A+ E A A+ +
Sbjct: 284 SNKALRELVAEAKAE 298
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 29/255 (11%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+++ H +VK LGA D + I+ E PG ++ ++ L + + + +
Sbjct: 61 ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQML 119
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAP 118
A++ LH+ IIHRDLK N+L+T + ++LADFG+ A+ WMAP
Sbjct: 120 EALNFLHSKRIIHRDLKAGNVLMTL-EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 178
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ T++ Y+ K D++S GI L E+ P ++ ++ A K P L
Sbjct: 179 EVVMCETMKD---TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KSDPPTL 234
Query: 179 --PEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAAT 236
P S + ++ ++P RPS +Q++ P V ++ T
Sbjct: 235 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE------------HPFV-------SSIT 275
Query: 237 SNGAMTEFSARARGK 251
SN A+ E A A+ +
Sbjct: 276 SNKALRELVAEAKAE 290
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYL---VSLRPNKLDLHVALNFAL 56
+M ++H LV + +D M +V +LL G LR +L V + + L F
Sbjct: 68 IMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-----FIC 122
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM 116
++ A+D L IIHRD+KPDN+LL + + + DF +A +M
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQITTMAGTKPYM 181
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA-AYAAAFKHAR 175
APE++S+ R+G Y+ VD +S G+ +ELL R P+ S+ + F+
Sbjct: 182 APEMFSS---RKGAG--YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV 236
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
P S ++ +++ +P+ R FSQ+ + N
Sbjct: 237 VTYPSAWSQEMVSLLKKLLEPNPDQR--FSQLSDVQN 271
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 180 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 229
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 230 PDE-------VVWPGVTSMPDYKPSFPKWAR 253
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 79/178 (44%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ D+GLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDYGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSL-RP-NKLDLHVALNFALD 57
+++ H N+VK L A + + I+ E G ++ ++ L RP + + V LD
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWM 116
A++ LH N IIHRDLK N+L T D +KLADFG+ A+ WM
Sbjct: 147 ---ALNYLHDNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDXFIGTPYWM 202
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP 176
APE+ V + + Y+ K DV+S GI L E+ P ++ ++ A K P
Sbjct: 203 APEV---VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA-KSEPP 258
Query: 177 GL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
L P S + ++ C ++ + R + SQ+++
Sbjct: 259 TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 173
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 174 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 223
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 224 PDE-------VVWPGVTSMPDYKPSFPKWAR 247
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 180 EILLG-------XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 229
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 230 PDE-------VVWPGVTSMPDYKPSFPKWAR 253
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 173 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 222
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 223 PDE-------VVWPGVTSMPDYKPSFPKWAR 246
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 49 HVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX 108
H + +I A++ LH GII+RD+K +N+LL + + L DFGL++
Sbjct: 159 HEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERA 217
Query: 109 XX--XXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQ 164
+MAP++ +R G+ H + VD +S G++++ELLT PF +G N Q
Sbjct: 218 YDFCGTIEYMAPDI-----VRGGDSGH-DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 271
Query: 165 AAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLR 201
A + + P P+++S ++Q ++DP R
Sbjct: 272 AEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 120
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+A+FG + ++ PE
Sbjct: 121 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPE 178
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 179 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 228
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 176 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 225
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 226 PDE-------VVWPGVTSMPDYKPSFPKWAR 249
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 175 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 224
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 225 PDE-------VVWPGVTSMPDYKPSFPKWAR 248
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 173 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 222
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 223 PDE-------VVWPGVTSMPDYKPSFPKWAR 246
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 172 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 221
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 222 PDE-------VVWPGVTSMPDYKPSFPKWAR 245
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 1 MMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNK-LDLHVALNFALDI 58
+M++ +H+NLV+ LG D + +V +P SL L L L H+ A
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGA 142
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRW 115
A ++ LH N IHRD+K N+LL + + K++DFGLAR +
Sbjct: 143 ANGINFLHENHHIHRDIKSANILL-DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAY 201
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 152
MAPE LR GE K D+YSFG+VL E++T
Sbjct: 202 MAPE-----ALR-GE---ITPKSDIYSFGVVLLEIIT 229
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 176
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 177 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 226
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 227 PDE-------VVWPGVTSMPDYKPSFPKWAR 250
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 172 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 221
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 222 PDE-------VVWPGVTSMPDYKPSFPKWAR 245
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 173 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 222
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 223 PDE-------VVWPGVTSMPDYKPSFPKWAR 246
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 176 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 225
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 226 PDE-------VVWPGVTSMPDYKPSFPKWAR 249
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 173 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 222
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 223 PDE-------VVWPGVTSMPDYKPSFPKWAR 246
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L +K D + ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELA 121
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL LK+A+FG + ++ PE
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLG-SAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPE 179
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ E + ++ KVD++S G++ +E L + PFE + Q Y P
Sbjct: 180 MI--------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETY-KRISRVEFTFP 229
Query: 180 EDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ ++ ++ +P+ RP +++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 172 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 221
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 222 PDE-------VVWPGVTSMPDYKPSFPKWAR 245
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 174 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 223
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 224 PDE-------VVWPGVTSMPDYKPSFPKWAR 247
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 175 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 224
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 225 PDE-------VVWPGVTSMPDYKPSFPKWAR 248
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 176
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 177 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 226
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 227 PDE-------VVWPGVTSMPDYKPSFPKWAR 250
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 173 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 222
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 223 PDE-------VVWPGVTSMPDYKPSFPKWAR 246
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 174 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 223
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 224 PDE-------VVWPGVTSMPDYKPSFPKWAR 247
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 173 EILLG-------XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 222
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 223 PDE-------VVWPGVTSMPDYKPSFPKWAR 246
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 17/172 (9%)
Query: 1 MMSRVKHDNLVKFL------GACKDPLMV-IVTELLPGMSLR--KYLVSLRPNKLDLHVA 51
+M VKH N+V G KD + + +V E +P R ++ L+ L +
Sbjct: 85 IMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIK 144
Query: 52 LNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
L + + R++ +H+ GI HRD+KP NLLL P LKL DFG A+
Sbjct: 145 L-YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC 203
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T +Y +D++S G V+ EL+ + F G S +
Sbjct: 204 SRYYRAPELIFGAT-------NYTTNIDIWSTGCVMAELMQGQPLFPGESGI 248
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 7 HDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVS-LRPNKLDLHVALNFALDIARAMDC 64
H N++K +D +V E G L ++ ++ N++D V + L +
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVL---SGVTY 151
Query: 65 LHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYS 122
LH + I+HRDLKP+NLLL +K +K+ DFGL+ ++APE+
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL- 210
Query: 123 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
+K Y+ K DV+S G++L+ LL PF G ++
Sbjct: 211 --------RKKYDEKCDVWSIGVILFILLAGYPPFGGQTD 242
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 173 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 222
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 223 PDE-------VVWPGVTSMPDYKPSFPKWAR 246
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 172 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 221
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 222 PDE-------VVWPGVTSMPDYKPSFPKWAR 245
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ + +H+ G++HRDLKP NL + D + LK+ DFGLAR YR APE
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCE-LKILDFGLARHADAEMTGYVVTRWYR--APE 211
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ + HYN VD++S G ++ E+LT + F+G L
Sbjct: 212 VILSWM-------HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL 248
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 172 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 221
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 222 PDE-------VVWPGVTSMPDYKPSFPKWAR 245
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 1 MMSRVKHDNLVKFLG------ACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNF 54
++ +KH+N++ L + +D V + L G L + + D HV
Sbjct: 80 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS--DEHVQF-L 136
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR 114
+ R + +H+ GIIHRDLKP N+ + D + L++ DFGLAR YR
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSE-LRILDFGLARQADEEMTGYVATRWYR 195
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE+ HYN VD++S G ++ ELL + F G
Sbjct: 196 --APEIMLNWM-------HYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+K++ + + L + ++ +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 173 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 222
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 223 PDE-------VVWPGVTSMPDYKPSFPKWAR 246
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ + +H+ G++HRDLKP NL + D + LK+ DFGLAR YR APE
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNLAVNEDCE-LKILDFGLARHADAEMTGYVVTRWYR--APE 193
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ + HYN VD++S G ++ E+LT + F+G L
Sbjct: 194 VILSWM-------HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL 230
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 13 FLGACKDPLMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDIARAMDCLHANGII 71
F D + +V E +PG L + + P K A + ++ A+D +H+ G I
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW----ARFYTAEVVLALDAIHSMGFI 195
Query: 72 HRDLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 129
HRD+KPDN+LL LKLADFG + +++PE+ + QG
Sbjct: 196 HRDVKPDNMLLDK-SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS----QG 250
Query: 130 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP-GLPED 181
+Y + D +S G+ L+E+L PF S L Y+ H P+D
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSLTFPDD 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 1 MMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNK-LDLHVALNFALDI 58
+M++ +H+NLV+ LG D + +V +P SL L L L H+ A
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGA 142
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX---XXXYRW 115
A ++ LH N IHRD+K N+LL + + K++DFGLAR +
Sbjct: 143 ANGINFLHENHHIHRDIKSANILL-DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAY 201
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 152
MAPE LR GE K D+YSFG+VL E++T
Sbjct: 202 MAPE-----ALR-GE---ITPKSDIYSFGVVLLEIIT 229
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 6 KHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
+H N++ D V +VTEL+ G L + LR A I + ++
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKI--LRQKFFSEREASAVLFTITKTVEY 131
Query: 65 LHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXX-XXXYRWMAPEL 120
LHA G++HRDLKP N+L + +S+++ DFG A+ ++APE
Sbjct: 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE- 190
Query: 121 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
V RQG Y+ D++S G++L+ +LT PF
Sbjct: 191 ---VLERQG----YDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++I+ E + G L + A DI A+ LH++ I HRD+KP+NLL
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T +K LKL DFG A+ Y ++APE+ G +K Y+ D
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEVL-------GPEK-YDKSCD 192
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH----ARPGLP----EDISPDLAFIVQ 191
++S G++++ LL PF SN A + K + G P ++S D +++
Sbjct: 193 MWSLGVIMYILLCGFPPF--YSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIR 250
Query: 192 SCWVEDPNLRPSFSQII 208
DP R + +Q +
Sbjct: 251 LLLKTDPTERLTITQFM 267
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 13 FLGACKDPLMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDIARAMDCLHANGII 71
F D + +V E +PG L + + P K A + ++ A+D +H+ G I
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW----ARFYTAEVVLALDAIHSMGFI 190
Query: 72 HRDLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 129
HRD+KPDN+LL LKLADFG + +++PE+ + QG
Sbjct: 191 HRDVKPDNMLLDK-SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS----QG 245
Query: 130 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP-GLPED 181
+Y + D +S G+ L+E+L PF S L Y+ H P+D
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSLTFPDD 297
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 18/224 (8%)
Query: 2 MSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIA 59
+ +++H N +++ G ++ +V E G + V +P ++++ + AL
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL--- 164
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ + LH++ +IHRD+K N+LL+ + +KL DFG A WMAPE
Sbjct: 165 QGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPANXFVGTPY---WMAPE 220
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ + + +G+ Y+ KVDV+S GI EL + P M+ + A Y A ++ P L
Sbjct: 221 V--ILAMDEGQ---YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPALQ 274
Query: 180 ED-ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS 222
S V SC + P RP+ +++ + F+ RPP+
Sbjct: 275 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK--HRFVLRERPPT 316
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++I+ E + G L + A DI A+ LH++ I HRD+KP+NLL
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T +K LKL DFG A+ Y ++APE+ G +K Y+ D
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEVL-------GPEK-YDKSCD 211
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH----ARPGLP----EDISPDLAFIVQ 191
++S G++++ LL PF SN A + K + G P ++S D +++
Sbjct: 212 MWSLGVIMYILLCGFPPF--YSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIR 269
Query: 192 SCWVEDPNLRPSFSQII 208
DP R + +Q +
Sbjct: 270 LLLKTDPTERLTITQFM 286
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 13 FLGACKDPLMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDIARAMDCLHANGII 71
F D + +V E +PG L + + P K A + ++ A+D +H+ G I
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW----ARFYTAEVVLALDAIHSMGFI 195
Query: 72 HRDLKPDNLLLTPDQKSLKLADFG--LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQG 129
HRD+KPDN+LL LKLADFG + +++PE+ + QG
Sbjct: 196 HRDVKPDNMLLDK-SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS----QG 250
Query: 130 EKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARP-GLPED 181
+Y + D +S G+ L+E+L PF S L Y+ H P+D
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSLTFPDD 302
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ +V E PG L Y++S ++L I A+ +H+ G HRDLKP+NLL
Sbjct: 83 IFMVLEYCPGGELFDYIIS--QDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLL 140
Query: 82 LTPDQKSLKLADFGLAR--XXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
K LKL DFGL + APEL QG K + ++ D
Sbjct: 141 FDEYHK-LKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI------QG-KSYLGSEAD 192
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPN 199
V+S GI+L+ L+ LPF+ N+ A Y + + +P+ +SP ++Q DP
Sbjct: 193 VWSMGILLYVLMCGFLPFDD-DNVMALYKKIMR-GKYDVPKWLSPSSILLLQQMLQVDPK 250
Query: 200 LRPSFSQII 208
R S ++
Sbjct: 251 KRISMKNLL 259
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 1 MMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNK-LDLHVALNFALDI 58
+M++ +H+NLV+ LG D + +V +P SL L L L H+ A
Sbjct: 77 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGA 136
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX---XXXXYRW 115
A ++ LH N IHRD+K N+LL + + K++DFGLAR +
Sbjct: 137 ANGINFLHENHHIHRDIKSANILL-DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAY 195
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN 153
MAPE LR GE K D+YSFG+VL E++T
Sbjct: 196 MAPE-----ALR-GE---ITPKSDIYSFGVVLLEIITG 224
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 18/224 (8%)
Query: 2 MSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIA 59
+ +++H N +++ G ++ +V E G + V +P ++++ + AL
Sbjct: 69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL--- 125
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ + LH++ +IHRD+K N+LL+ + +KL DFG A WMAPE
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPANXFVGTPY---WMAPE 181
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLP 179
+ + + +G+ Y+ KVDV+S GI EL + P M+ + A Y A ++ P L
Sbjct: 182 V--ILAMDEGQ---YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPALQ 235
Query: 180 ED-ISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPS 222
S V SC + P RP+ +++ + F+ RPP+
Sbjct: 236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK--HRFVLRERPPT 277
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L ++ D + ++A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELA 122
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL + + LK+ADFG + ++ PE
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLGSNGE-LKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 180
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 161
+ E + ++ KVD++S G++ +E L PFE +
Sbjct: 181 MI--------EGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNK--LDLHVALNFALD 57
++ ++ H N++K+ + +D + IV EL L + + + K + + +
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWM 116
+ A++ +H+ ++HRD+KP N+ +T +KL D GL R +M
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYM 203
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG-MSNLQAAYAAAFKHAR 175
+PE + + YN K D++S G +L+E+ + PF G NL + +
Sbjct: 204 SPE--------RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY 255
Query: 176 PGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQI 207
P LP D S +L +V C DP RP + +
Sbjct: 256 PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 68 NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLR 127
+G+IHRD+KP N+LL ++ +KL DFG++ +MAPE +
Sbjct: 144 HGVIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPE---RIDPP 199
Query: 128 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI--SPD 185
K Y+ + DV+S GI L EL T + P++ + P LP + S D
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259
Query: 186 LAFIVQSCWVEDPNLRPSFSQII 208
V+ C +D RP +++++
Sbjct: 260 FQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ ++ H ++K IV EL+ G L +V + +L + +
Sbjct: 207 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLL 264
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++ ++AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE---GMSNLQAAYAAAFKHAR 175
E+ +V YN VD +S G++L+ L+ PF +L+ + +
Sbjct: 325 EVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 379
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P + ++S +V+ V DP R + + +R
Sbjct: 380 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 413
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ ++ H ++K IV EL+ G L +V + +L + +
Sbjct: 193 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLL 250
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++ ++AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE---GMSNLQAAYAAAFKHAR 175
E+ +V YN VD +S G++L+ L+ PF +L+ + +
Sbjct: 311 EVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 365
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P + ++S +V+ V DP R + + +R
Sbjct: 366 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ ++ H ++K IV EL+ G L +V + +L + +
Sbjct: 68 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLL 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++ ++AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE---GMSNLQAAYAAAFKHAR 175
E+ +V YN VD +S G++L+ L+ PF +L+ + +
Sbjct: 186 EVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P + ++S +V+ V DP R + + +R
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ ++ H ++K IV EL+ G L +V + +L + +
Sbjct: 67 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLL 124
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++ ++AP
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE---GMSNLQAAYAAAFKHAR 175
E+ +V YN VD +S G++L+ L+ PF +L+ + +
Sbjct: 185 EVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 239
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P + ++S +V+ V DP R + + +R
Sbjct: 240 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 273
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ FGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILGFGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ ++ H ++K IV EL+ G L +V + +L + +
Sbjct: 74 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLL 131
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++ ++AP
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 191
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE---GMSNLQAAYAAAFKHAR 175
E+ +V YN VD +S G++L+ L+ PF +L+ + +
Sbjct: 192 EVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 246
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P + ++S +V+ V DP R + + +R
Sbjct: 247 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 280
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDI 58
++ ++KH+N+V + P + +V +L+ G L +V + D + LD
Sbjct: 73 VLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD- 131
Query: 59 ARAMDCLHANGIIHRDLKPDNLL-LTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWM 116
A+ LH GI+HRDLKP+NLL + D++S + ++DFGL++ ++
Sbjct: 132 --AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYV 189
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNL-QAAYAAAFKH 173
APE+ + +K Y+ VD +S G++ + LL PF E S L + A ++
Sbjct: 190 APEVLA--------QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEF 241
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P +DIS +++ +DPN R + Q R
Sbjct: 242 DSP-YWDDISDSAKDFIRNLMEKDPNKRYTCEQAAR 276
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 24 IVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLL 82
+V E + G S+ ++ R N+L+ V + D+A A+D LH GI HRDLKP+N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPENILC 144
Query: 83 T-PDQKS-LKLADFGLARXXXXXXXXXXXXX--------XYRWMAPELYSTVTLRQGEKK 132
P+Q S +K+ DFGL +MAPE+ + E
Sbjct: 145 EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS---EEAS 201
Query: 133 HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 167
Y+ + D++S G++L+ LL+ PF G +
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW 236
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 1 MMSRVKHDNLVKFLG------ACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNF 54
++ +KH+N++ L + +D V + L G L + + D HV
Sbjct: 72 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS--DEHVQF-L 128
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR 114
+ R + +H+ GIIHRDLKP N+ + D + L++ DFGLAR YR
Sbjct: 129 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE-LRILDFGLARQADEEMTGYVATRWYR 187
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE+ HYN VD++S G ++ ELL + F G
Sbjct: 188 --APEIMLNWM-------HYNQTVDIWSVGCIMAELLQGKALFPG 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ ++ H ++K IV EL+ G L +V + +L + +
Sbjct: 68 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLL 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++ ++AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE---GMSNLQAAYAAAFKHAR 175
E+ +V YN VD +S G++L+ L+ PF +L+ + +
Sbjct: 186 EVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P + ++S +V+ V DP R + + +R
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ G D V ++ E P ++ + L L ++ D + ++A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELA 122
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H+ +IHRD+KP+NLLL + + LK+ADFG + ++ PE
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLGSNGE-LKIADFGWS-VHAPSSRRDTLCGTLDYLPPE 180
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 161
+ E + ++ KVD++S G++ +E L PFE +
Sbjct: 181 MI--------EGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
++ ++ H ++K IV EL+ G L +V + +L + +
Sbjct: 68 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLL 125
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
A+ LH NGIIHRDLKP+N+LL+ ++ +K+ DFG ++ ++AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE---GMSNLQAAYAAAFKHAR 175
E+ +V YN VD +S G++L+ L+ PF +L+ + +
Sbjct: 186 EVLVSVG-----TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P + ++S +V+ V DP R + + +R
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 1 MMSRVKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSL-RP-NKLDLHVALNFALD 57
+++ H N+VK L A + + I+ E G ++ ++ L RP + + V LD
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 119
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--W 115
A++ LH N IIHRDLK N+L T D +KLADFG++ W
Sbjct: 120 ---ALNYLHDNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTXIQRRDSFIGTPYW 175
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHAR 175
MAPE+ V + + Y+ K DV+S GI L E+ P ++ ++ A K
Sbjct: 176 MAPEV---VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA-KSEP 231
Query: 176 PGL--PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P L P S + ++ C ++ + R + SQ+++
Sbjct: 232 PTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 267
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+ ++ + + L + ++ +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP+NLL+ + ++KLADFGLAR W AP
Sbjct: 114 QGLAFCHSHRVLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 173 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 222
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 223 PDE-------VVWPGVTSMPDYKPSFPKWAR 246
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
++ + H N+VK L ++ L ++ + L+K++ + + L + ++ +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEHV--DQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-A 117
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W A
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 175 PEILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--G 224
Query: 178 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 225 TPDE-------VVWPGVTSMPDYKPSFPKWAR 249
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM------VIVTELLPGMSLRKYLVSLRPNKLDLHVALNF 54
++ R +H+N++ + P + +VT L+ G L K L + L F
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLL---KTQHLSNDHICYF 149
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 114 --RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 209 ATRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ D GLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDAGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ VKH +V + A + + ++ E L G L ++ R A + +I+
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEIS 131
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-XXXYRWMAP 118
A+ LH GII+RDLKP+N++L Q +KL DFGL + +MAP
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAP 190
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
E + +R G +N VD +S G +++++LT PF G
Sbjct: 191 E----ILMRSG----HNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ R+ H N++K + P + +V EL+ G L +V A + I
Sbjct: 101 VLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIV--EKGYYSERDAADAVKQIL 158
Query: 60 RAMDCLHANGIIHRDLKPDNLLL---TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM 116
A+ LH NGI+HRDLKP+NLL PD LK+ADFGL++ +
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPAPDA-PLKIADFGLSKIVEHQVLMKTVCGTPGYC 217
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
APE+ Y +VD++S GI+ + LL PF
Sbjct: 218 APEILRGCA--------YGPEVDMWSVGIITYILLCGFEPF 250
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+VK L + + +V E L L+ ++ + + L + ++ +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-AP 118
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W AP
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 176 EILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--GT 225
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 226 PDE-------VVWPGVTSMPDYKPSFPKWAR 249
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ D GLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDGGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ VKH +V + A + + ++ E L G L ++ R A + +I+
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEIS 131
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-XXXYRWMAP 118
A+ LH GII+RDLKP+N++L Q +KL DFGL + +MAP
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAP 190
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
E + +R G +N VD +S G +++++LT PF G
Sbjct: 191 E----ILMRSG----HNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 6 KHDNLVKFLGACKDPLMV-IVTELLPGMSL-----RKYLVSLRPNKLDLHVALNFALDIA 59
+H N++ D V +VTEL+ G L R+ S R LH I
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-------IG 131
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXX-XXXYRW 115
+ ++ LH+ G++HRDLKP N+L + + L++ DFG A+ +
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF 191
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+APE V RQG Y+ D++S GI+L+ +L PF
Sbjct: 192 VAPE----VLKRQG----YDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ D GLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDRGLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRK----YLVS----------LRPNKL 46
++ +KH+N++ L P SL + YLV+ ++ KL
Sbjct: 74 LLKHMKHENVIGLLDV-----------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 47 -DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
D HV I R + +H+ IIHRDLKP NL + D + LK+ DF LAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE-LKILDFYLARHTDDEMT 180
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
YR APE+ HYN VD++S G ++ ELLT R F G ++
Sbjct: 181 GYVATRWYR--APEIMLNWM-------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 16/162 (9%)
Query: 5 VKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLH---VALNFALDIAR 60
+KH ++V+ L D ++ +V E + G L +V R + ++ VA ++ I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK-RADAGFVYSEAVASHYMRQILE 141
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLA-RXXXXXXXXXXXXXXYRWMA 117
A+ H N IIHRD+KP+N+LL + S +KL DFG+A + +MA
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
PE+ +++ Y VDV+ G++L+ LL+ LPF G
Sbjct: 202 PEVV--------KREPYGKPVDVWGCGVILFILLSGCLPFYG 235
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 19/217 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDI 58
+ +++H N+V+ + ++ +V +L+ G L + +V+ ++ D A + I
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQI 114
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWM 116
++ H+NGI+HR+LKP+NLLL K ++KLADFGLA ++
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 174
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAY-AAAFKH 173
+PE+ +K Y+ VD+++ G++L+ LL PF E L A A A+ +
Sbjct: 175 SPEVL--------KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM 210
P + ++P+ ++ S +P R + Q +++
Sbjct: 227 PSPEW-DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 39/237 (16%)
Query: 1 MMSRVKHDNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + D +VK+ G P + +V E LP LR +L R +LD L ++
Sbjct: 65 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQ 123
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L + +HRDL N+L+ + +K+ADFGLA+ +
Sbjct: 124 ICKGMEYLGSRRCVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 182
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-------RLPFEGMSNLQAA 166
W APE S ++ + DV+SFG+VL+EL T F M +
Sbjct: 183 FWYAPESLSDNI--------FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 234
Query: 167 YAAAFKH-----------ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
A + A P P ++ +++ CW P RPSFS + L+
Sbjct: 235 VPALCRLLELLEEGQRLPAPPACPAEVHE----LMKLCWAPSPQDRPSFSALGPQLD 287
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 6 KHDNLVKFLGACKDPLMV-IVTELLPGMSL-----RKYLVSLRPNKLDLHVALNFALDIA 59
+H N++ D V +VTEL+ G L R+ S R LH I
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-------IG 131
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXX-XXXYRW 115
+ ++ LH+ G++HRDLKP N+L + + L++ DFG A+ +
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF 191
Query: 116 MAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+APE V RQG Y+ D++S GI+L+ +L PF
Sbjct: 192 VAPE----VLKRQG----YDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 19/217 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDI 58
+ +++H N+V+ + ++ +V +L+ G L + +V+ ++ D A + I
Sbjct: 57 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQI 113
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWM 116
++ H+NGI+HR+LKP+NLLL K ++KLADFGLA ++
Sbjct: 114 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 173
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAY-AAAFKH 173
+PE+ +K Y+ VD+++ G++L+ LL PF E L A A A+ +
Sbjct: 174 SPEVL--------KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM 210
P + ++P+ ++ S +P R + Q +++
Sbjct: 226 PSPEW-DTVTPEAKSLIDSMLTVNPKKRITADQALKV 261
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 19/217 (8%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLR-PNKLDLHVALNFALDI 58
+ +++H N+V+ + ++ +V +L+ G L + +V+ ++ D A + I
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQI 114
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWM 116
++ H+NGI+HR+LKP+NLLL K ++KLADFGLA ++
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 174
Query: 117 APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAY-AAAFKH 173
+PE+ +K Y+ VD+++ G++L+ LL PF E L A A A+ +
Sbjct: 175 SPEVL--------KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRM 210
P + ++P+ ++ S +P R + Q +++
Sbjct: 227 PSPEW-DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 6 KHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
+H N++ D V +VTEL G L + LR A I + ++
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKI--LRQKFFSEREASAVLFTITKTVEY 131
Query: 65 LHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXX-XXXYRWMAPEL 120
LHA G++HRDLKP N+L + +S+++ DFG A+ ++APE
Sbjct: 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPE- 190
Query: 121 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
V RQG Y+ D++S G++L+ LT PF
Sbjct: 191 ---VLERQG----YDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDI 58
++ ++ H N++K +D +V E+ G L ++S R +++D A +
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 141
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWM 116
+ +H N I+HRDLKP+NLLL K ++++ DFGL+ ++
Sbjct: 142 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 201
Query: 117 APE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE L+ T Y+ K DV+S G++L+ LL+ PF G
Sbjct: 202 APEVLHGT----------YDEKCDVWSTGVILYILLSGCPPFNG 235
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 39/237 (16%)
Query: 1 MMSRVKHDNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + D +VK+ G P + +V E LP LR +L R +LD L ++
Sbjct: 61 ILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQ 119
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L + +HRDL N+L+ + +K+ADFGLA+ +
Sbjct: 120 ICKGMEYLGSRRCVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI 178
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-------RLPFEGMSNLQAA 166
W APE S ++ + DV+SFG+VL+EL T F M +
Sbjct: 179 FWYAPESLSDNI--------FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 230
Query: 167 YAAAFKH-----------ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
A + A P P ++ +++ CW P RPSFS + L+
Sbjct: 231 VPALCRLLELLEEGQRLPAPPACPAEVHE----LMKLCWAPSPQDRPSFSALGPQLD 283
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ ++KH+N+V + +V +L+ G L ++ R + +L +
Sbjct: 59 VLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE-RGVYTEKDASLVIQ-QVL 116
Query: 60 RAMDCLHANGIIHRDLKPDNLL-LTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMA 117
A+ LH NGI+HRDLKP+NLL LTP++ S + + DFGL++ ++A
Sbjct: 117 SAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP-GYVA 175
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHAR 175
PE+ + +K Y+ VD +S G++ + LL PF E S L +
Sbjct: 176 PEVLA--------QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE 227
Query: 176 PGLPEDISPDLAFIVQSCWVEDPNLR 201
+DIS + +DPN R
Sbjct: 228 SPFWDDISESAKDFICHLLEKDPNER 253
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDI 58
++ ++ H N++K +D +V E+ G L ++S R +++D A +
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 159
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWM 116
+ +H N I+HRDLKP+NLLL K ++++ DFGL+ ++
Sbjct: 160 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 219
Query: 117 APE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE L+ T Y+ K DV+S G++L+ LL+ PF G
Sbjct: 220 APEVLHGT----------YDEKCDVWSTGVILYILLSGCPPFNG 253
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDI 58
++ ++ H N++K +D +V E+ G L ++S R +++D A +
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 158
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWM 116
+ +H N I+HRDLKP+NLLL K ++++ DFGL+ ++
Sbjct: 159 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 218
Query: 117 APE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE L+ T Y+ K DV+S G++L+ LL+ PF G
Sbjct: 219 APEVLHGT----------YDEKCDVWSTGVILYILLSGCPPFNG 252
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 39/237 (16%)
Query: 1 MMSRVKHDNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + D +VK+ G P + +V E LP LR +L R +LD L ++
Sbjct: 77 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQ 135
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L + +HRDL N+L+ + +K+ADFGLA+ +
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 194
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-------RLPFEGMSNLQAA 166
W APE S ++ + DV+SFG+VL+EL T F M +
Sbjct: 195 FWYAPESLSDNI--------FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 246
Query: 167 YAAAFKH-----------ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
A + A P P ++ +++ CW P RPSFS + L+
Sbjct: 247 VPALSRLLELLEEGQRLPAPPACPAEVHE----LMKLCWAPSPQDRPSFSALGPQLD 299
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 12/211 (5%)
Query: 7 HDNLVKFLGA-------CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
H N+ + GA D + +V E S+ + + + N L +I
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL-ARXXXXXXXXXXXXXXYRWMAP 118
R + LH + +IHRD+K N+LLT + +KL DFG+ A+ WMAP
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL 178
E+ + + Y+ K D++S GI E+ P M ++A + A
Sbjct: 199 EV---IACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLK 255
Query: 179 PEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+ S ++SC V++ + RP+ Q+++
Sbjct: 256 SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 6 KHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
+H +++K P +V E + G L Y+ + +++ A I A+D
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEARRLFQQILSAVDY 126
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
H + ++HRDLKP+N+LL + K+ADFGL+ + APE+ S
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG- 184
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPED 181
+ + +VD++S G++L+ LL LPF+ FK R G +PE
Sbjct: 185 ------RLYAGPEVDIWSCGVILYALLCGTLPFD-----DEHVPTLFKKIRGGVFYIPEY 233
Query: 182 ISPDLAFIVQSCWVEDPNLRPSFSQI 207
++ +A ++ DP R + I
Sbjct: 234 LNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 22/242 (9%)
Query: 1 MMSRVKHDNLVKFLGAC----KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFAL 56
++ R++H N+++ + K + +++ + GM ++ L S+ + + A +
Sbjct: 59 LLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--QEMLDSVPEKRFPVCQAHGYFC 116
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXY 113
+ ++ LH+ GI+H+D+KP NLLLT +LK++ G+A
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH 173
+ PE+ + + G KVD++S G+ L+ + T PFEG N+ + K
Sbjct: 176 AFQPPEIANGLDTFSG------FKVDIWSAGVTLYNITTGLYPFEG-DNIYKLFENIGKG 228
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRP---PSPSVPESDT 230
+ +P D P L+ +++ +P R S Q IR + F P P P P DT
Sbjct: 229 SY-AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQ-IRQHSWFRKKHPPAEAPVPIPPSPDT 286
Query: 231 NE 232
+
Sbjct: 287 KD 288
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 53 NFALDIARAMDCLHAN-GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
A+ I +A++ LH+ +IHRD+KP N+L+ +K+ DFG++
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAG 215
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 171
+MAPE + ++G Y+ K D++S GI + EL R P++
Sbjct: 216 CKPYMAPERINPELNQKG----YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 271
Query: 172 KHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+ P LP D S + C ++ RP++ ++++
Sbjct: 272 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDI 58
++ ++ H N++K +D +V E+ G L ++S R +++D A +
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 135
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWM 116
+ +H N I+HRDLKP+NLLL K ++++ DFGL+ ++
Sbjct: 136 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 195
Query: 117 APE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE L+ T Y+ K DV+S G++L+ LL+ PF G
Sbjct: 196 APEVLHGT----------YDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 98/233 (42%), Gaps = 31/233 (13%)
Query: 1 MMSRVKHDNLVKFLGACKDP---LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALD 57
++ + D +VK+ G P + +V E LP LR +L R +LD L ++
Sbjct: 64 ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQ 122
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYR--- 114
I + M+ L + +HRDL N+L+ + +K+ADFGLA+ +
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 181
Query: 115 -WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT----------NRLPFEGMSNL 163
W APE S ++ + DV+SFG+VL+EL T L G
Sbjct: 182 FWYAPESLSDNI--------FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERD 233
Query: 164 QAAYAAAFKHARPG----LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLN 212
A + + G P ++ +++ CW P RPSFS + L+
Sbjct: 234 VPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 286
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 6 KHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
+H +++K P +V E + G L Y+ + +++ A I A+D
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEARRLFQQILSAVDY 126
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
H + ++HRDLKP+N+LL + K+ADFGL+ + APE+ S
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISG- 184
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG---LPED 181
+ + +VD++S G++L+ LL LPF+ FK R G +PE
Sbjct: 185 ------RLYAGPEVDIWSCGVILYALLCGTLPFD-----DEHVPTLFKKIRGGVFYIPEY 233
Query: 182 ISPDLAFIVQSCWVEDPNLRPSFSQI 207
++ +A ++ DP R + I
Sbjct: 234 LNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+V + + + +V E + L+K L + D + + + +
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKI-YLYQLL 129
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
R + H + I+HRDLKP NLL+ D +LKLADFGLAR W
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLW---- 184
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
Y + G KK Y+ VD++S G + E++T + F G+++
Sbjct: 185 -YRAPDVLMGSKK-YSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ + H N+V + + + +V E + L+K L + D + + + +
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKI-YLYQLL 129
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
R + H + I+HRDLKP NLL+ D +LKLADFGLAR W
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLW---- 184
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
Y + G KK Y+ VD++S G + E++T + F G+++
Sbjct: 185 -YRAPDVLMGSKK-YSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 130
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 190 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 130
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 190 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 134
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 194 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 134
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 194 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
F I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNT-TSDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 114 ---RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 190 VATRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSD-CTLKILDFGLARTASTNFMMTPYVVTRYYRAPE----V 194
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ EL+ + F+G ++
Sbjct: 195 ILGMG----YKENVDIWSVGCIMGELVKGSVIFQGTDHI 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 6 KHDNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+H N+V+ C ++ + +V E + L YL + + + +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
R +D LH++ ++HRDLKP N+L+T + +KLADFGLAR + APE
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ + Y VD++S G + E+ + F G S++
Sbjct: 190 VLL--------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 1 MMSRVKHDNLVKFLGA--CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
++ + H N+VK L ++ L ++ + L+ ++ + + L + ++ +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEHV--HQDLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWM-A 117
+ + H++ ++HRDLKP NLL+ + ++KLADFGLAR W A
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPG 177
PE+ K+Y+ VD++S G + E++T R F G S + + F+ G
Sbjct: 171 PEILLGC-------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFRTL--G 220
Query: 178 LPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P++ +V P+ +PSF + R
Sbjct: 221 TPDE-------VVWPGVTSMPDYKPSFPKWAR 245
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 6 KHDNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+H N+V+ C ++ + +V E + L YL + + + +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
R +D LH++ ++HRDLKP N+L+T + +KLADFGLAR + APE
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ + Y VD++S G + E+ + F G S++
Sbjct: 190 VLL--------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 6 KHDNLVKFLGAC------KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+H N+V+ C ++ + +V E + L YL + + + +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
R +D LH++ ++HRDLKP N+L+T + +KLADFGLAR + APE
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQ-IKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ + Y VD++S G + E+ + F G S++
Sbjct: 190 VLL--------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 130
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 190 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 21/215 (9%)
Query: 2 MSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
MS ++H LV A +D MV++ E + G L + V+ NK+ A+ + + +
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE-KVADEHNKMSEDEAVEYMRQVCK 160
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ +H N +H DLKP+N++ T + + LKL DFGL + APE
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 220
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG------MSNLQAAYAAAFKH 173
+ E K D++S G++ + LL+ PF G + N+++
Sbjct: 221 V--------AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS 272
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
A G IS D ++ + DPN R + Q +
Sbjct: 273 AFSG----ISEDGKDFIRKLLLADPNTRMTIHQAL 303
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 130
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 190 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 76 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 132
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 192 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 21/216 (9%)
Query: 2 MSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR 60
MS ++H LV A +D MV++ E + G L + V+ NK+ A+ + + +
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE-KVADEHNKMSEDEAVEYMRQVCK 266
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ +H N +H DLKP+N++ T + + LKL DFGL + APE
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 326
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG------MSNLQAAYAAAFKH 173
+ E K D++S G++ + LL+ PF G + N+++
Sbjct: 327 V--------AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS 378
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
A G IS D ++ + DPN R + Q +
Sbjct: 379 AFSG----ISEDGKDFIRKLLLADPNTRMTIHQALE 410
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 53 NFALDIARAMDCLHAN-GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
A+ I +A++ LH+ +IHRD+KP N+L+ +K+ DFG++
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAG 171
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 171
+MAPE + + +K Y+ K D++S GI + EL R P++
Sbjct: 172 CKPYMAPERINP----ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227
Query: 172 KHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+ P LP D S + C ++ RP++ ++++
Sbjct: 228 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 128
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 188 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 134
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 194 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 82 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 138
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 198 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 238
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 130
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 190 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYS 122
LH + I+HRDLKP+NLLL + +K+ DFGL+ ++APE+
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL- 195
Query: 123 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
+K Y+ K DV+S G++L+ LL PF G ++
Sbjct: 196 --------RKKYDEKCDVWSCGVILYILLCGYPPFGGQTD 227
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 24 IVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLL 82
+V E + G S+ ++ R N+L+ V + D+A A+D LH GI HRDLKP+N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPENILC 144
Query: 83 T-PDQKS-LKLADFGLARXXXXXXXXXXXXX--------XYRWMAPELYSTVTLRQGEKK 132
P+Q S +K+ DF L +MAPE+ + E
Sbjct: 145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS---EEAS 201
Query: 133 HYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 167
Y+ + D++S G++L+ LL+ PF G +
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW 236
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 135
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 195 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYS 122
LH + I+HRDLKP+NLLL + +K+ DFGL+ ++APE+
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL- 178
Query: 123 TVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
+K Y+ K DV+S G++L+ LL PF G ++
Sbjct: 179 --------RKKYDEKCDVWSCGVILYILLCGYPPFGGQTD 210
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 80 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 136
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 196 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 236
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 71 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 127
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 187 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 227
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 134
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 194 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 128
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 188 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 150
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 210 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSL-RPNKLDLHVALNFALDI 58
++ ++ H N+ K +D +V E+ G L ++S R +++D A +
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 135
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWM 116
+ H N I+HRDLKP+NLLL K ++++ DFGL+ ++
Sbjct: 136 LSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYI 195
Query: 117 APE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE L+ T Y+ K DV+S G++L+ LL+ PF G
Sbjct: 196 APEVLHGT----------YDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ + +HA GIIHRDLKP NL + D + LK+ DFGLAR YR APE
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLAVNEDCE-LKILDFGLARQADSEMXGXVVTRWYR--APE 195
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ Y VD++S G ++ E++T + F+G +L
Sbjct: 196 VILNWM-------RYTQTVDIWSVGCIMAEMITGKTLFKGSDHL 232
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 26/199 (13%)
Query: 2 MSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVS--LRPNKLDLHVALNFALDI 58
+S +H +LV +G C + M+++ + + +L+++L L + L +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSL-KLADFGLARXXXXXXXX---XXXXXXYR 114
AR + LH IIHRD+K N+LL D+ + K+ DFG+++
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILL--DENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNR------LPFEGMSNLQAAYA 168
++ PE + K K DVYSFG+VL+E+L R LP E M NL A
Sbjct: 207 YIDPEYFI--------KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE-MVNL--AEW 255
Query: 169 AAFKHARPGLPEDISPDLA 187
A H L + + P+LA
Sbjct: 256 AVESHNNGQLEQIVDPNLA 274
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
F I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 114 ---RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 190 VATRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 7 HDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIAR----A 61
H N+VK D L +V ELL G L + + K H + A I R A
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI------KKKKHFSETEASYIMRKLVSA 118
Query: 62 MDCLHANGIIHRDLKPDNLLLTPDQKSL--KLADFGLARXX-XXXXXXXXXXXXYRWMAP 118
+ +H G++HRDLKP+NLL T + +L K+ DFG AR + AP
Sbjct: 119 VSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAA--FKHARP 176
EL + + Y+ D++S G++L+ +L+ ++PF+ +A K +
Sbjct: 179 ELLN--------QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK 230
Query: 177 G-------LPEDISPDLAFIVQSCWVEDPNLRPSFS 205
G +++S + ++Q DPN R S
Sbjct: 231 GDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMS 266
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 19 DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPD 78
D +V E L G S+ ++ + + A D+A A+D LH GI HRDLKP+
Sbjct: 83 DTRFYLVFEKLQGGSILAHI--QKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPE 140
Query: 79 NLLL-TPDQKS-LKLADFGLARXXXXXXXXXXXXX--------XYRWMAPELYSTVTLRQ 128
N+L +P++ S +K+ DF L +MAPE+ T
Sbjct: 141 NILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFT--- 197
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 167
+ Y+ + D++S G+VL+ +L+ PF G +
Sbjct: 198 DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGW 236
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 26/199 (13%)
Query: 2 MSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVS--LRPNKLDLHVALNFALDI 58
+S +H +LV +G C + M+++ + + +L+++L L + L +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSL-KLADFGLARXXX---XXXXXXXXXXXYR 114
AR + LH IIHRD+K N+LL D+ + K+ DFG+++
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILL--DENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
Query: 115 WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNR------LPFEGMSNLQAAYA 168
++ PE + K K DVYSFG+VL+E+L R LP E M NL A
Sbjct: 207 YIDPEYFI--------KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE-MVNL--AEW 255
Query: 169 AAFKHARPGLPEDISPDLA 187
A H L + + P+LA
Sbjct: 256 AVESHNNGQLEQIVDPNLA 274
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 1 MMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNK-LDLHVALNFALDI 58
+ ++ +H+NLV+ LG D + +V P SL L L L H A
Sbjct: 74 VXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGA 133
Query: 59 ARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
A ++ LH N IHRD+K N+LL + + K++DFGLAR R +
Sbjct: 134 ANGINFLHENHHIHRDIKSANILL-DEAFTAKISDFGLARASEKFAQXVXXS---RIVGT 189
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLT 152
Y +GE K D+YSFG+VL E++T
Sbjct: 190 TAYXAPEALRGE---ITPKSDIYSFGVVLLEIIT 220
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KCQHLSNDHICYFL 134
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-- 113
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR Y
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 114 -RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 194 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 9 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 65
N++K + KDP+ +V E + ++ L D + + ++ +A+D
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQIL----TDFDIRF-YMYELLKALDYC 148
Query: 66 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 125
H+ GI+HRD+KP N+++ QK L+L D+GLA + PEL
Sbjct: 149 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 126 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLP-FEGMSN 162
+ Y+ +D++S G +L ++ R P F G N
Sbjct: 209 M-------YDYSLDMWSLGCMLASMIFRREPFFHGQDN 239
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 120
+ LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE- 195
Query: 121 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
V L G Y VD++S G+++ E++ + F G ++
Sbjct: 196 ---VILGMG----YKENVDIWSVGVIMGEMIKGGVLFPGTDHI 231
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G+++ E++ + F G ++
Sbjct: 197 ILGMG----YKENVDIWSVGVIMGEMIKGGVLFPGTDHI 231
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 9 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 65
N++K + KDP+ +V E + ++ L D + + ++ +A+D
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQIL----TDFDIRF-YMYELLKALDYC 153
Query: 66 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 125
H+ GI+HRD+KP N+++ QK L+L D+GLA + PEL
Sbjct: 154 HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 126 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLP-FEGMSN 162
+ Y+ +D++S G +L ++ R P F G N
Sbjct: 214 M-------YDYSLDMWSLGCMLASMIFRREPFFHGQDN 244
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 234
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 235 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMVCHKILFPG 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 234
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 235 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSD-XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 189
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 190 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 6 KHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
+H +++K P + +V E + G L Y+ + +LD + I +D
Sbjct: 74 RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDY 131
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
H + ++HRDLKP+N+LL + K+ADFGL+ + APE+ S
Sbjct: 132 CHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISG- 189
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGL---PED 181
+ + +VD++S G++L+ LL LPF+ FK G+ P+
Sbjct: 190 ------RLYAGPEVDIWSSGVILYALLCGTLPFD-----DDHVPTLFKKICDGIFYTPQY 238
Query: 182 ISPDLAFIVQSCWVEDPNLRPSFSQI 207
++P + +++ DP R + I
Sbjct: 239 LNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 141 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 195
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 196 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 226
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 197
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 198 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 197
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 198 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 190
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 191 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 189
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 190 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 33/176 (18%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN------- 53
++ KHDN++ A KD I+ +P + V L + DLH ++
Sbjct: 107 ILKHFKHDNII----AIKD----ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 158
Query: 54 -----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXX-- 106
F + R + +H+ +IHRDLKP NLL+ + LK+ DFG+AR
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQ 217
Query: 107 --XXXXXXYRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APEL ++ Y +D++S G + E+L R F G
Sbjct: 218 YFMTEYVATRWYRAPELMLSL-------HEYTQAIDLWSVGCIFGEMLARRQLFPG 266
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSD-CTLKILDFGLARTACTNFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ EL+ + F+G ++
Sbjct: 197 ILGMG----YAANVDIWSVGCIMGELVKGCVIFQGTDHI 231
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 190
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 191 ILGMG----YKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
A+ +A +IA + L + GII+RDLK DN++L + +K+ADFG+ +
Sbjct: 123 AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXF 181
Query: 111 XXY-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA 169
++APE+ + + Y VD ++FG++L+E+L + PFEG + + +
Sbjct: 182 CGTPDYIAPEIIAY--------QPYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQS 232
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLR 201
+H P+ +S + I + + P R
Sbjct: 233 IMEH-NVAYPKSMSKEAVAICKGLMTKHPGKR 263
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 197 ILGMG----YKENVDLWSVGCIMGEMVCHKILFPG 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ E++ + F G ++
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 147 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 201
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 202 ILGMG----YKENVDLWSVGCIMGEMVCHKILFPG 232
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 33/176 (18%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALN------- 53
++ KHDN++ A KD I+ +P + V L + DLH ++
Sbjct: 106 ILKHFKHDNII----AIKD----ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 157
Query: 54 -----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLAR----XXXXXX 104
F + R + +H+ +IHRDLKP NLL+ + LK+ DFG+AR
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQ 216
Query: 105 XXXXXXXXYRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APEL ++ Y +D++S G + E+L R F G
Sbjct: 217 YFMTEYVATRWYRAPELMLSL-------HEYTQAIDLWSVGCIFGEMLARRQLFPG 265
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 190
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
L G Y VD++S G ++ E++ +++ F G
Sbjct: 191 ILGMG----YKENVDLWSVGCIMGEMVCHKILFPG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ E++ + F G ++
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ E++ + F G ++
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
A+ +A +IA + L + GII+RDLK DN++L + +K+ADFG+ +
Sbjct: 444 AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXF 502
Query: 111 XXY-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA 169
++APE+ + + Y VD ++FG++L+E+L + PFEG + + +
Sbjct: 503 CGTPDYIAPEIIAY--------QPYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQS 553
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLR 201
+H P+ +S + I + + P R
Sbjct: 554 IMEH-NVAYPKSMSKEAVAICKGLMTKHPGKR 584
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ E++ + F G ++
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ E++ + F G ++
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +KH N+V + + +V E L L++YL N +++H F +
Sbjct: 53 LLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLL 110
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
R + H ++HRDLKP NLL+ ++ LKLADFGLAR W P
Sbjct: 111 RGLAYCHRQKVLHRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRP- 168
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 161
+ L + Y+ ++D++ G + +E+ T R F G +
Sbjct: 169 --PDILLGSTD---YSTQIDMWGVGCIFYEMATGRPLFPGST 205
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 197
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ E++ + F G ++
Sbjct: 198 ILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 232
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ E++ + F G ++
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE----V 196
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ E++ + F G ++
Sbjct: 197 ILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 231
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 22/115 (19%)
Query: 50 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
V L+ L IA A++ LH+ G++HRDLKP N+ T D +K+ DFGL
Sbjct: 119 VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTV 177
Query: 110 XX-------------XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 151
+M+PE Q Y++KVD++S G++L+ELL
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPE--------QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 5 VKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 63
++H N+V+F P + I+ E G L + + + + A F + +
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN--AGRFSEDEARFFFQQLLSGVS 130
Query: 64 CLHANGIIHRDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 121
H+ I HRDLK +N LL +P + LK+ DFG ++ ++APE
Sbjct: 131 YCHSMQICHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-- 187
Query: 122 STVTLRQGEKKHYNNKV-DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH---ARPG 177
V LRQ Y+ K+ DV+S G+ L+ +L PFE + Y + +
Sbjct: 188 --VLLRQ----EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSVKYS 240
Query: 178 LPED--ISPDLAFIVQSCWVEDPNLRPSFSQI 207
+P+D ISP+ ++ +V DP R S +I
Sbjct: 241 IPDDIRISPECCHLISRIFVADPATRISIPEI 272
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH+ GIIHRDLKP N+++ D +LK+ DFGLAR + APE V
Sbjct: 144 LHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPE----V 198
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
L G Y VD++S G ++ E++ + F G ++
Sbjct: 199 ILGMG----YKENVDIWSVGCIMGEMIKGGVLFPGTDHI 233
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ + RA+ +H+ GI HRD+KP NLL+ +LKL DFG A+
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSR 205
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL T Y +D++S G V EL+ + F G +++
Sbjct: 206 FYRAPELMLGAT-------EYTPSIDLWSIGCVFGELILGKPLFSGETSI 248
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I A++ LH+ +++RD+K +NL+L D +K+ DFGL +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGT 168
Query: 114 -RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 172
++APE+ E Y VD + G+V++E++ RLPF + + +
Sbjct: 169 PEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLR 201
R P +SP+ ++ +DP R
Sbjct: 221 EIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I A++ LH+ +++RD+K +NL+L D +K+ DFGL +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGT 168
Query: 114 -RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 172
++APE+ E Y VD + G+V++E++ RLPF + + +
Sbjct: 169 PEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLR 201
R P +SP+ ++ +DP R
Sbjct: 221 EIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I A++ LH+ +++RD+K +NL+L D +K+ DFGL +
Sbjct: 113 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGT 171
Query: 114 -RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 172
++APE+ E Y VD + G+V++E++ RLPF + + +
Sbjct: 172 PEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 223
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLR 201
R P +SP+ ++ +DP R
Sbjct: 224 EIR--FPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 96/246 (39%), Gaps = 55/246 (22%)
Query: 5 VKHDNLVKFLGA----CKDPLM--VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDI 58
++HDN+ +F+ D M ++V E P SL KYL SL + D + A +
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-SLHTS--DWVSSCRLAHSV 120
Query: 59 ARAMDCLHAN---------GIIHRDLKPDNLLLTPDQKSLKLADFGLA---------RXX 100
R + LH I HRDL N+L+ D + ++DFGL+ R
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV-ISDFGLSMRLTGNRLVRPG 179
Query: 101 XXXXXXXXXXXXYRWMAPE-LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL---TNRLP 156
R+MAPE L V LR E +VD+Y+ G++ WE+ T+ P
Sbjct: 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESAL--KQVDMYALGLIYWEIFMRCTDLFP 237
Query: 157 FEGMSNLQAAYAAAF---------------KHARPGLPEDISPD------LAFIVQSCWV 195
E + Q A+ + RP PE + L ++ CW
Sbjct: 238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWD 297
Query: 196 EDPNLR 201
+D R
Sbjct: 298 QDAEAR 303
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 134
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXX 112
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 113 YRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 194 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPLM-----VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFA 55
++ R +H+N++ + P + V + + L L K L + L F
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSNDHICYFL 135
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXX 112
I R + +H+ ++HRDLKP NLLL LK+ DFGLAR
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 113 YRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 195 TRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 6 KHDNLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 65
+H V+ A ++ ++ + L G SL+++ + + + V + D A+ L
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQV-WGYLRDTLLALAHL 173
Query: 66 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 125
H+ G++H D+KP N+ L P + KL DFGL R+MAPEL
Sbjct: 174 HSQGLVHLDVKPANIFLGPRGRC-KLGDFGLLVELGTAGAGEVQEGDPRYMAPELL---- 228
Query: 126 LRQGEKKHYNNKVDVYSFGIVLWELLTN-RLPF--EGMSNLQAAYAAAFKHARPGLPEDI 182
+ Y DV+S G+ + E+ N LP EG L+ Y LP +
Sbjct: 229 -----QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY----------LPPEF 273
Query: 183 SPDLAFIVQSCWV----EDPNLRPSFSQIIRM 210
+ L+ ++S V DP LR + ++ +
Sbjct: 274 TAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +KH N+VK +V+V E L L+K L+ + L+ A +F L +
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKK-LLDVCEGGLESVTAKSFLLQLL 110
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ H ++HRDLKP NLL+ + LK+ADFGLAR W
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEVVTLW---- 165
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 161
Y + G KK Y+ +D++S G + E++ F G+S
Sbjct: 166 -YRAPDVLMGSKK-YSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +KH N+VK +V+V E L L+K L+ + L+ A +F L +
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKK-LLDVCEGGLESVTAKSFLLQLL 110
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ H ++HRDLKP NLL+ + LK+ADFGLAR W
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEIVTLW---- 165
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 161
Y + G KK Y+ +D++S G + E++ F G+S
Sbjct: 166 -YRAPDVLMGSKK-YSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXX---XXX 110
F I R + +H+ ++HRDLKP NLL+ LK+ DFGLAR
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLIN-TTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 111 XXYRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
RW APE+ K Y +D++S G +L E+L+NR F G
Sbjct: 208 VATRWYRAPEIMLN-------SKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 25/231 (10%)
Query: 7 HDNLVKFLG--ACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDC 64
H +++ L ++ M+++ LP L Y+ P L + F + A+
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP--LGEGPSRCFFGQVVAAIQH 154
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
H+ G++HRD+K +N+L+ + KL DFG + + PE S
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRVYSPPEWIS-- 211
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISP 184
+++ V+S GI+L++++ +PFE + A P +SP
Sbjct: 212 -----RHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELH--------FPAHVSP 258
Query: 185 DLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVPESDTNEAAA 235
D +++ C P+ RPS +I +L+ ++ T P+ VP + + A
Sbjct: 259 DCCALIRRCLAPKPSSRPSLEEI--LLDPWMQT---PAEDVPLNPSKGGPA 304
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I A++ LH+ +++RD+K +NL+L D +K+ DFGL +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 114 -RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 172
++APE+ E Y VD + G+V++E++ RLPF + + +
Sbjct: 169 PEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLR 201
R P +SP+ ++ +DP R
Sbjct: 221 EIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I A++ LH+ +++RD+K +NL+L D +K+ DFGL +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 114 -RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 172
++APE+ E Y VD + G+V++E++ RLPF + + +
Sbjct: 169 PEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLR 201
R P +SP+ ++ +DP R
Sbjct: 221 EIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 10/109 (9%)
Query: 50 VALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX 109
V L+ + IA A++ LH+ G++HRDLKP N+ T D +K+ DFGL
Sbjct: 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTV 223
Query: 110 -------XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 151
+ +LY ++ Q +Y++KVD++S G++L+ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLY--MSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 1 MMSRVKHDNLVKFLGACK-DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +KH N+VK +V+V E L L+K L+ + L+ A +F L +
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKK-LLDVCEGGLESVTAKSFLLQLL 110
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ H ++HRDLKP NLL+ + LK+ADFGLAR W
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEVVTLW---- 165
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMS 161
Y + G KK Y+ +D++S G + E++ F G+S
Sbjct: 166 -YRAPDVLMGSKK-YSTTIDIWSVGCIFAEMVNGAPLFPGVS 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 18 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKP 77
KD L +++T L+ G L+ ++ + A+ +A +I ++ LH I++RDLKP
Sbjct: 256 KDALCLVLT-LMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKP 314
Query: 78 DNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNK 137
+N+LL D ++++D GLA +MAPE+ + Y
Sbjct: 315 ENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN--------ERYTFS 365
Query: 138 VDVYSFGIVLWELLTNRLPFE 158
D ++ G +L+E++ + PF+
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQ 386
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 18 KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKP 77
KD L +++T L+ G L+ ++ + A+ +A +I ++ LH I++RDLKP
Sbjct: 256 KDALCLVLT-LMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKP 314
Query: 78 DNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNK 137
+N+LL D ++++D GLA +MAPE+ + Y
Sbjct: 315 ENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN--------ERYTFS 365
Query: 138 VDVYSFGIVLWELLTNRLPFE 158
D ++ G +L+E++ + PF+
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQ 386
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I A++ LH+ +++RD+K +NL+L D +K+ DFGL +
Sbjct: 115 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGT 173
Query: 114 -RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 172
++APE+ E Y VD + G+V++E++ RLPF + + +
Sbjct: 174 PEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 225
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLR 201
R P +SP+ ++ +DP R
Sbjct: 226 EIR--FPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ L + ++ LH + I+HRDLKP+NLLL + LKLADFGLA+
Sbjct: 117 YMLMTLQGLEYLHQHWILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPNRAYXHQVVT 175
Query: 114 RWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
RW APEL + Y VD+++ G +L ELL R+PF
Sbjct: 176 RWYRAPELLFGARM-------YGVGVDMWAVGCILAELLL-RVPF 212
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I A++ LH+ +++RD+K +NL+L D +K+ DFGL +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 114 -RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK 172
++APE+ E Y VD + G+V++E++ RLPF + + +
Sbjct: 169 PEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLR 201
R P +SP+ ++ +DP R
Sbjct: 221 EIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 89/220 (40%), Gaps = 23/220 (10%)
Query: 1 MMSRVKHDNLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNK--LDLHVALNFA 55
++ +KH N+V++ D + IV E G L + + LD L
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 56 LDIARAMDCLH-----ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A+ H + ++HRDLKP N+ L Q ++KL DFGLAR
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDTSFAKTF 176
Query: 111 XXY-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA 169
+M+PE Q + YN K D++S G +L+EL PF S Q A
Sbjct: 177 VGTPYYMSPE--------QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAG 226
Query: 170 AFKHAR-PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ + +P S +L I+ RPS +I+
Sbjct: 227 KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +KH N+V+ D + +V E L+KY S LD + +F +
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCN-GDLDPEIVKSFLFQLL 111
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ + H+ ++HRDLKP NLL+ + + LKLADFGLAR W P
Sbjct: 112 KGLGFCHSRNVLHRDLKPQNLLINRNGE-LKLADFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 120 --LYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL 150
L+ K Y+ +D++S G + EL
Sbjct: 171 DVLFGA--------KLYSTSIDMWSAGCIFAEL 195
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 89/220 (40%), Gaps = 23/220 (10%)
Query: 1 MMSRVKHDNLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNK--LDLHVALNFA 55
++ +KH N+V++ D + IV E G L + + LD L
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 56 LDIARAMDCLH-----ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A+ H + ++HRDLKP N+ L Q ++KL DFGLAR
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDTSFAKAF 176
Query: 111 XXY-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA 169
+M+PE Q + YN K D++S G +L+EL PF S Q A
Sbjct: 177 VGTPYYMSPE--------QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAG 226
Query: 170 AFKHAR-PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ + +P S +L I+ RPS +I+
Sbjct: 227 KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 7 HDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDC 64
H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELY 121
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 122 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 179 K-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS 218
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 178 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 177 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 163
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 164 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 215
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 216 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 273
Query: 192 SCWVEDPNLRPSFSQII 208
+ +P R + ++ +
Sbjct: 274 NLLKTEPTQRMTITEFM 290
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +K+ADFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 1 MMSRVKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M+++ H NL++ A + +V+V E + G L ++ N +L L F I
Sbjct: 139 VMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQIC 197
Query: 60 RAMDCLHANGIIHRDLKPDNLL-LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
+ +H I+H DLKP+N+L + D K +K+ DFGLAR ++AP
Sbjct: 198 EGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAP 257
Query: 119 EL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
E+ Y V+ D++S G++ + LL+ PF G
Sbjct: 258 EVVNYDFVSF----------PTDMWSVGVIAYMLLSGLSPFLG 290
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +K+ADFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +K+ADFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 89/220 (40%), Gaps = 23/220 (10%)
Query: 1 MMSRVKHDNLVKFLGACKD---PLMVIVTELLPGMSLRKYLVSLRPNK--LDLHVALNFA 55
++ +KH N+V++ D + IV E G L + + LD L
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 56 LDIARAMDCLH-----ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
+ A+ H + ++HRDLKP N+ L Q ++KL DFGLAR
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDEDFAKEF 176
Query: 111 XXY-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA 169
+M+PE Q + YN K D++S G +L+EL PF S Q A
Sbjct: 177 VGTPYYMSPE--------QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAG 226
Query: 170 AFKHAR-PGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ + +P S +L I+ RPS +I+
Sbjct: 227 KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 51 ALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXX 110
A+ +A +I+ + LH GII+RDLK DN++L + +K+ADFG+ +
Sbjct: 122 AVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD-SEGHIKIADFGMCKEHMMDGVTTREF 180
Query: 111 XXY-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
++APE+ + + Y VD +++G++L+E+L + PF+G
Sbjct: 181 CGTPDYIAPEIIAY--------QPYGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 178 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 178 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 148
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 149 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 200
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 201 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 258
Query: 192 SCWVEDPNLRPSFSQII 208
+ +P R + ++ +
Sbjct: 259 NLLKTEPTQRMTITEFM 275
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 5 VKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIARAM 62
+KH N+V+ + ++ +V +L+ G L + +V+ ++ D A + I ++
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIQQILESV 116
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMA--- 117
+ H NGI+HRDLKP+NLLL K ++KLADFGLA W
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--------IEVQGDQQAWFGFAG 168
Query: 118 -PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNL-QAAYAAAFKH 173
P S LR K Y VD+++ G++L+ LL PF E L Q A A+
Sbjct: 169 TPGYLSPEVLR---KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P + ++P+ ++ +P R + S+ ++
Sbjct: 226 PSPEW-DTVTPEAKDLINKMLTINPAKRITASEALK 260
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 178 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 154
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 155 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 206
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 207 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 264
Query: 192 SCWVEDPNLRPSFSQII 208
+ +P R + ++ +
Sbjct: 265 NLLKTEPTQRMTITEFM 281
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 156 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 207
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 208 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 265
Query: 192 SCWVEDPNLRPSFSQII 208
+ +P R + ++ +
Sbjct: 266 NLLKTEPTQRMTITEFM 282
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGCLLKYIRKI--GSFDETCTRFY 137
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVG 196
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K + D+++ G ++++L+ PF
Sbjct: 197 TAQYVSPELLT--------EKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 153
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 154 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 205
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 206 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 263
Query: 192 SCWVEDPNLRPSFSQII 208
+ +P R + ++ +
Sbjct: 264 NLLKTEPTQRMTITEFM 280
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 199
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 200 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 251
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 252 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 309
Query: 192 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSP 223
+ +P R + ++ + T P +P
Sbjct: 310 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 341
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 245
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 246 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 303
Query: 192 SCWVEDPNLRPSFSQII 208
+ +P R + ++ +
Sbjct: 304 NLLKTEPTQRMTITEFM 320
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 5 VKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLH---VALNFALDIAR 60
+KH ++V+ L D ++ +V E + G L +V R + ++ VA ++ I
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK-RADAGFVYSEAVASHYMRQILE 143
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLA-RXXXXXXXXXXXXXXYRWMA 117
A+ H N IIHRD+KP +LL + S +KL FG+A + +MA
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 203
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
PE+ +++ Y VDV+ G++L+ LL+ LPF G
Sbjct: 204 PEVV--------KREPYGKPVDVWGCGVILFILLSGCLPFYG 237
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 199
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 200 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 257
Query: 192 SCWVEDPNLRPSFSQII 208
+ +P R + ++ +
Sbjct: 258 NLLKTEPTQRMTITEFM 274
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 201
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 202 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 259
Query: 192 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSP 223
+ +P R + ++ + T P +P
Sbjct: 260 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 291
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 201
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 202 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 259
Query: 192 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSP 223
+ +P R + ++ + T P +P
Sbjct: 260 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 291
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 5 VKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIARAM 62
+KH N+V+ + ++ +V +L+ G L + +V+ ++ D A + I ++
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD---ASHCIQQILESV 116
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMA--- 117
+ H NGI+HRDLKP+NLLL K ++KLADFGLA W
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--------IEVQGDQQAWFGFAG 168
Query: 118 -PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNL-QAAYAAAFKH 173
P S LR K Y VD+++ G++L+ LL PF E L Q A A+
Sbjct: 169 TPGYLSPEVLR---KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P + ++P+ ++ +P R + S+ ++
Sbjct: 226 PSPEW-DTVTPEAKDLINKMLTINPAKRITASEALK 260
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL 120
A+ LHAN I+HRDLKP+N+LL D ++L+DFG + ++APE+
Sbjct: 212 AVSFLHANNIVHRDLKPENILLD-DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEI 270
Query: 121 YSTVTLRQGEKKH--YNNKVDVYSFGIVLWELLTNRLPF 157
++ H Y +VD+++ G++L+ LL PF
Sbjct: 271 LKCSM----DETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL-------GPEK-YDKSCD 199
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 200 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 257
Query: 192 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSP 223
+ +P R + ++ + T P +P
Sbjct: 258 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 289
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 7 HDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDC 64
H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELY 121
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 122 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 179 K-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 7 HDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDC 64
H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELY 121
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 122 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 179 K-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 7 HDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDC 64
H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELY 121
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 121 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 122 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 180 K-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 116
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 117 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 176 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 217
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 178 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 7 HDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDC 64
H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELY 121
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 122 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 179 K-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 7 HDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDC 64
H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELY 121
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 122 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 179 K-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 7 HDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAMDC 64
H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPELY 121
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APEL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 122 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 179 K-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 54 FALDIARAMDCLH--ANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
F + R++ CLH + + HRD+KP N+L+ +LKL DFG A+
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
+ APEL +HY VD++S G + E++ F G
Sbjct: 194 SRYYRAPELIFG-------NQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 5 VKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLH---VALNFALDIAR 60
+KH ++V+ L D ++ +V E + G L +V R + ++ VA ++ I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK-RADAGFVYSEAVASHYMRQILE 141
Query: 61 AMDCLHANGIIHRDLKPDNLLLTPDQKS--LKLADFGLA-RXXXXXXXXXXXXXXYRWMA 117
A+ H N IIHRD+KP +LL + S +KL FG+A + +MA
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
PE+ +++ Y VDV+ G++L+ LL+ LPF G
Sbjct: 202 PEVV--------KREPYGKPVDVWGCGVILFILLSGCLPFYG 235
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M + ++VK+ G+ K+ + IV E S+ ++ LR L
Sbjct: 77 IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTL 135
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAP 118
+ ++ LH IHRD+K N+LL + + KLADFG+A + WMAP
Sbjct: 136 KGLEYLHFMRKIHRDIKAGNILLNTEGHA-KLADFGVAGQLTDXMAKRNXVIGTPFWMAP 194
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAA------AFK 172
E+ + YN D++S GI E+ + P+ + ++A + F+
Sbjct: 195 EVIQEIG--------YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFR 246
Query: 173 HARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
PE S + V+ C V+ P R + +Q+++
Sbjct: 247 K-----PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 137
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 196
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 171
++++PEL + +K D+++ G ++++L+ PF N +A
Sbjct: 197 TAQYVSPELLT--------EKSAXKSSDLWALGCIIYQLVAGLPPFRA-GNEGLIFAKII 247
Query: 172 KHARPGLPEDISPDLAFIVQSCWVEDPNLR 201
K PE P +V+ V D R
Sbjct: 248 K-LEYDFPEKFFPKARDLVEKLLVLDATKR 276
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 5 VKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 63
++H N+V+F P + IV E G L + + + + A F + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVS 129
Query: 64 CLHANGIIHRDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 121
HA + HRDLK +N LL +P + LK+ADFG ++ ++APE+
Sbjct: 130 YAHAMQVAHRDLKLENTLLDGSPAPR-LKIADFGYSKASVLHSQPKSAVGTPAYIAPEVL 188
Query: 122 STVTLRQGEKKHYNNKV-DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--HARPGL 178
KK Y+ KV DV+S G+ L+ +L PFE + + + + +
Sbjct: 189 L--------KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 240
Query: 179 PE--DISPDLAFIVQSCWVEDPNLRPSFSQI 207
P+ ISP+ ++ +V DP R S +I
Sbjct: 241 PDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 177 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 178 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 177 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 177 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 177 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 177 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----- 112
I A+ +H+ GIIHRDLKP N+ + + +++K+ DFGLA+
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFI-DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 113 ----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 151
+ +Y + G HYN K+D+YS GI+ +E++
Sbjct: 184 SDNLTSAIGTAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMI 225
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 5 VKHDNLVKFLGACKDP-LMVIVTELLPGMSLRKYLVSLRPN-KLDLHVALNFALDIARAM 62
+ H+N+VKF G ++ + + E G L + P+ + A F + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXXXXXXXXYRWMAPE 119
LH GI HRD+KP+NLLL ++ +LK++DFGLA R ++APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA 168
L ++ + VDV+S GIVL +L LP++ S+ Y+
Sbjct: 178 LLK-------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----- 112
I A+ +H+ GIIHRDLKP N+ + + +++K+ DFGLA+
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFI-DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 113 ----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 151
+ +Y + G HYN K+D+YS GI+ +E++
Sbjct: 184 SDNLTSAIGTAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMI 225
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 135
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANAFVG 194
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 195 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 137
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 196
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 171
++++PEL + +K D+++ G ++++L+ PF N +A
Sbjct: 197 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEGLIFAKII 247
Query: 172 KHARPGLPEDISPDLAFIVQSCWVEDPNLR 201
K PE P +V+ V D R
Sbjct: 248 K-LEYDFPEKFFPKARDLVEKLLVLDATKR 276
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 86 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 138
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVG 197
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 198 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ V E + G L ++ R + D A +A +I A+ LH GII+RDLK DN+L
Sbjct: 99 LFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVL 156
Query: 82 LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKHYNNKVDV 140
L + KLADFG+ + ++APE+ + Y VD
Sbjct: 157 LD-HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML--------YGPAVDW 207
Query: 141 YSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNL 200
++ G++L+E+L PFE + + A + P + D I++S ++P +
Sbjct: 208 WAMGVLLYEMLCGHAPFEAEN--EDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTM 265
Query: 201 R 201
R
Sbjct: 266 R 266
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +K+ADFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 1 MMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ D + ++ E P L K L + + D + F ++A
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSATFMEELA 124
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H +IHRD+KP+NLL+ + LK+ADFG + ++ PE
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ E K ++ KVD++ G++ +E L PF+ S+ +
Sbjct: 183 MI--------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 135
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 194
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 195 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 86 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 138
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 197
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 198 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 54 FALDIARAMDCLHAN-GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 112
+ +I A+D LH+ +++RDLK +NL+L D +K+ DFGL +
Sbjct: 113 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCG 171
Query: 113 Y-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 171
++APE+ E Y VD + G+V++E++ RLPF + +
Sbjct: 172 TPEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 223
Query: 172 KHARPGLPEDISPDLAFIVQSCWVEDPNLR 201
+ R P + P+ ++ +DP R
Sbjct: 224 EEIR--FPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 1 MMSRVKHDNLVKFLGAC-KDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +KH N+V+ D + +V E L+KY S + LD + +F +
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-LDPEIVKSFLFQLL 111
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
+ + H+ ++HRDLKP NLL+ + + LKLA+FGLAR W P
Sbjct: 112 KGLGFCHSRNVLHRDLKPQNLLINRNGE-LKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 120 --LYSTVTLRQGEKKHYNNKVDVYSFGIVLWEL 150
L+ K Y+ +D++S G + EL
Sbjct: 171 DVLFGA--------KLYSTSIDMWSAGCIFAEL 195
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 137
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 196
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 197 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 135
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 194
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 195 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 137
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 196
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 197 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 1 MMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ D + ++ E P L K L + + D + F ++A
Sbjct: 68 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSATFMEELA 125
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H +IHRD+KP+NLL+ + LK+ADFG + ++ PE
Sbjct: 126 DALHYCHERKVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPE 183
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ E K ++ KVD++ G++ +E L PF+ S+ +
Sbjct: 184 MI--------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 90 VMSRLDHPFFVKLYFCFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 142
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 143 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 201
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 202 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 1 MMSRVKHDNLVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+ S ++H N+++ D + ++ E P L K L + + D + F ++A
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSATFMEELA 124
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPE 119
A+ H +IHRD+KP+NLL+ + LK+ADFG + ++ PE
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPE 182
Query: 120 LYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ E K ++ KVD++ G++ +E L PF+ S+ +
Sbjct: 183 MI--------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 88 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 140
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 141 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 199
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 200 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 83 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 135
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 194
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 195 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 54 FALDIARAMDCLHAN-GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 112
+ +I A+D LH+ +++RDLK +NL+L D +K+ DFGL +
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCG 311
Query: 113 Y-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 171
++APE+ E Y VD + G+V++E++ RLPF + +
Sbjct: 312 TPEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 363
Query: 172 KHARPGLPEDISPDLAFIVQSCWVEDPNLR 201
+ R P + P+ ++ +DP R
Sbjct: 364 EEIR--FPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHV--ALNFALDIARAMDCLHANGIIHRDLKPDN 79
+ +V ++ G +R ++ ++ + A+ + I ++ LH II+RDLKP+N
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPEN 319
Query: 80 LLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 138
+LL D +++++D GLA +MAPEL GE+ Y+ V
Sbjct: 320 VLLD-DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL------GEE--YDFSV 370
Query: 139 DVYSFGIVLWELLTNRLPF 157
D ++ G+ L+E++ R PF
Sbjct: 371 DYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHV--ALNFALDIARAMDCLHANGIIHRDLKPDN 79
+ +V ++ G +R ++ ++ + A+ + I ++ LH II+RDLKP+N
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPEN 319
Query: 80 LLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 138
+LL D +++++D GLA +MAPEL GE+ Y+ V
Sbjct: 320 VLLD-DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL------GEE--YDFSV 370
Query: 139 DVYSFGIVLWELLTNRLPF 157
D ++ G+ L+E++ R PF
Sbjct: 371 DYFALGVTLYEMIAARGPF 389
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 85 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 137
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 196
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 197 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHV--ALNFALDIARAMDCLHANGIIHRDLKPDN 79
+ +V ++ G +R ++ ++ + A+ + I ++ LH II+RDLKP+N
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPEN 319
Query: 80 LLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 138
+LL D +++++D GLA +MAPEL GE+ Y+ V
Sbjct: 320 VLLD-DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL------GEE--YDFSV 370
Query: 139 DVYSFGIVLWELLTNRLPF 157
D ++ G+ L+E++ R PF
Sbjct: 371 DYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHV--ALNFALDIARAMDCLHANGIIHRDLKPDN 79
+ +V ++ G +R ++ ++ + A+ + I ++ LH II+RDLKP+N
Sbjct: 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPEN 319
Query: 80 LLLTPDQKSLKLADFGLA-RXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 138
+LL D +++++D GLA +MAPEL GE+ Y+ V
Sbjct: 320 VLLD-DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL------GEE--YDFSV 370
Query: 139 DVYSFGIVLWELLTNRLPF 157
D ++ G+ L+E++ R PF
Sbjct: 371 DYFALGVTLYEMIAARGPF 389
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 54 FALDIARAMDCLHAN-GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 112
+ +I A+D LH+ +++RDLK +NL+L D +K+ DFGL +
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCG 172
Query: 113 Y-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 171
++APE+ E Y VD + G+V++E++ RLPF + +
Sbjct: 173 TPEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 224
Query: 172 KHARPGLPEDISPDLAFIVQSCWVEDPNLR 201
+ R P + P+ ++ +DP R
Sbjct: 225 EEIR--FPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 49 HVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXX 108
H+ + +A++ H + IHRD+KP+N+L+T +KL DFG AR
Sbjct: 102 HLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYD 160
Query: 109 XXXXYRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAY 167
RW +PEL T Y VDV++ G V ELL+ + G S++ Y
Sbjct: 161 DEVATRWYRSPELLVGDT-------QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY 213
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 54 FALDIARAMDCLHAN-GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 112
+ +I A+D LH+ +++RDLK +NL+L D +K+ DFGL +
Sbjct: 256 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCG 314
Query: 113 Y-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 171
++APE+ E Y VD + G+V++E++ RLPF + +
Sbjct: 315 TPEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 366
Query: 172 KHARPGLPEDISPDLAFIVQSCWVEDPNLR 201
+ R P + P+ ++ +DP R
Sbjct: 367 EEIR--FPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 62 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 114
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 115 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 173
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 174 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 5 VKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 63
++H N+V+F P + IV E G L + + + + A F + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVS 129
Query: 64 CLHANGIIHRDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 121
HA + HRDLK +N LL +P + LK+ DFG ++ ++APE+
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 122 STVTLRQGEKKHYNNKV-DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--HARPGL 178
KK Y+ KV DV+S G+ L+ +L PFE + + + + +
Sbjct: 189 L--------KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 240
Query: 179 PE--DISPDLAFIVQSCWVEDPNLRPSFSQI 207
P+ ISP+ ++ +V DP R S +I
Sbjct: 241 PDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 5 VKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 63
++H N+V+F P + IV E G L + + + + A F + +
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVS 128
Query: 64 CLHANGIIHRDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 121
HA + HRDLK +N LL +P + LK+ DFG ++ ++APE+
Sbjct: 129 YCHAMQVCHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 187
Query: 122 STVTLRQGEKKHYNNKV-DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--HARPGL 178
KK Y+ KV DV+S G+ L+ +L PFE + + + + +
Sbjct: 188 L--------KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 239
Query: 179 PE--DISPDLAFIVQSCWVEDPNLRPSFSQI 207
P+ ISP+ ++ +V DP R S +I
Sbjct: 240 PDYVHISPECRHLISRIFVADPAKRISIPEI 270
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 82 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 134
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVG 193
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 194 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 54 FALDIARAMDCLHAN-GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX 112
+ +I A+D LH+ +++RDLK +NL+L D +K+ DFGL +
Sbjct: 115 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCG 173
Query: 113 Y-RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 171
++APE+ E Y VD + G+V++E++ RLPF + +
Sbjct: 174 TPEYLAPEVL--------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 225
Query: 172 KHARPGLPEDISPDLAFIVQSCWVEDPNLR 201
+ R P + P+ ++ +DP R
Sbjct: 226 EEIR--FPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 63 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 115
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 116 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 174
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 175 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 20/195 (10%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ ++APE+ G +K Y+ D
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-------GPEK-YDKSCD 245
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
+S G++ + LL PF SN A + K R G E ++S ++ +++
Sbjct: 246 XWSLGVIXYILLCGYPPF--YSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIR 303
Query: 192 SCWVEDPNLRPSFSQ 206
+ +P R + ++
Sbjct: 304 NLLKTEPTQRXTITE 318
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 1 MMSRVKHDNLVK---FLGACKDPLMVIV---TELLPGMSLRKYLVSLRPNKLDLHVALN- 53
++ R+ HDN+VK LG L V TEL +++Y+ + N L+ L
Sbjct: 61 IIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEE 120
Query: 54 ----FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXX 106
F + R + +H+ ++HRDLKP NL + + LK+ DFGLAR
Sbjct: 121 HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGH 180
Query: 107 XXXXXXYRWM-APELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ 164
+W +P L + +Y +D+++ G + E+LT + F G L+
Sbjct: 181 LSEGLVTKWYRSPRLLLS-------PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDP---LMVIVTELL---PGMSLRKYLVSLRPNKLDLHVALNF 54
++ ++ H N+VK + DP + +V EL+ P M + +L+P L A +
Sbjct: 89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP----TLKP--LSEDQARFY 142
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY- 113
D+ + ++ LH IIHRD+KP NLL+ D +K+ADFG++
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGED-GHIKIADFGVSNEFKGSDALLSNTVGTP 201
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKH 173
+MAPE +L + K +DV++ G+ L+ + + PF M + K
Sbjct: 202 AFMAPE-----SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF--MDERIMCLHSKIKS 254
Query: 174 ARPGLPE--DISPDLAFIVQSCWVEDPNLRPSFSQI 207
P+ DI+ DL ++ ++P R +I
Sbjct: 255 QALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 53 NFALDIARAMDCLHAN-GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXX 111
A+ I +A++ LH+ +IHRD+KP N+L+ +K DFG++
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAG 198
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAF 171
+ APE + ++G Y+ K D++S GI EL R P++
Sbjct: 199 CKPYXAPERINPELNQKG----YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVV 254
Query: 172 KHARPGLPED-ISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
+ P LP D S + C ++ RP++ ++ +
Sbjct: 255 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 60 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 112
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 113 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 171
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 172 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 47 DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXX 106
D H+ F RA+ LH + +IHRDLKP NLL+ + LK+ DFGLAR
Sbjct: 111 DDHIQY-FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAAD 168
Query: 107 XXXXXXYRWMAPELYSTVTLRQGE----KKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
+ E +T R E Y+ +DV+S G +L EL R F G
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 61 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 113
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 114 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 172
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 173 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 47 DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXX 106
D H+ F RA+ LH + +IHRDLKP NLL+ + LK+ DFGLAR
Sbjct: 111 DDHIQY-FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAAD 168
Query: 107 XXXXXXYRWMAPELYSTVTLRQGE----KKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
+ E +T R E Y+ +DV+S G +L EL R F G
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 47 DLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXX 106
D H+ F RA+ LH + +IHRDLKP NLL+ + LK+ DFGLAR
Sbjct: 111 DDHIQY-FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAAD 168
Query: 107 XXXXXXYRWMAPELYSTVTLRQGE----KKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
+ E +T R E Y+ +DV+S G +L EL R F G
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 67 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 119
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 120 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 178
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 179 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPLMVIVTELLPGMS------LRKYLVSLRPNKLDLHVALNF 54
+MSR+ H VK +D +L G+S L KY+ + D +
Sbjct: 82 VMSRLDHPFFVKLYFTFQDD-----EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 134
Query: 55 ALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARX---XXXXXXXXXXXX 111
+I A++ LH GIIHRDLKP+N+LL D +++ DFG A+
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 193
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++++PEL + +K D+++ G ++++L+ PF
Sbjct: 194 TAQYVSPELLT--------EKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+M+++ H L+ A +D MV++ E L G L ++ K+ +N+
Sbjct: 101 IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFD-RIAAEDYKMSEAEVINYMRQAC 159
Query: 60 RAMDCLHANGIIHRDLKPDNLLL-TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAP 118
+ +H + I+H D+KP+N++ T S+K+ DFGLA + AP
Sbjct: 160 EGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAP 219
Query: 119 ELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
E+ +++ D+++ G++ + LL+ PF G +L+
Sbjct: 220 EIV--------DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET 258
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 53 NFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQK-SLKLADFGLARXXXXXXXXXXXXX 111
N I A+ LH GI HRD+KP+N L + ++ +KL DFGL++
Sbjct: 172 NIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM 231
Query: 112 XYR-----WMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN 162
+ ++APE+ +T + Y K D +S G++L LL +PF G+++
Sbjct: 232 TTKAGTPYFVAPEVLNTTN------ESYGPKCDAWSAGVLLHLLLMGAVPFPGVND 281
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NL++ Q +K+ DFGLA+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLMID-QQGYIKVTDFGLAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 9 NLVKFLGACKDPLM---VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL 65
N++ KDP+ +V E + ++ LR D + + +I +A+D
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ----LRQTLTDYDIRF-YMYEILKALDYC 147
Query: 66 HANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVT 125
H+ GI+HRD+KP N+++ + + L+L D+GLA + PEL
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 126 LRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ Y+ +D++S G +L ++ + PF
Sbjct: 208 M-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWTLCGTPEY--LAPE----IILSK 214
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 9 NLVKFLGACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
N V+ DP+ IV E + G SL++ + KL + A+ + L+I A+ LH+
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRS----KGQKLPVAEAIAYLLEILPALSYLHSI 201
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFG 95
G+++ DLKP+N++LT +Q LKL D G
Sbjct: 202 GLVYNDLKPENIMLTEEQ--LKLIDLG 226
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 5 VKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 63
+KH N+V+ + ++ +V +L+ G L + +V+ R + + + +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA-REYYSEADASHCIQQILEAVLH 118
Query: 64 CLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMA---- 117
C H G++HRDLKP+NLLL K ++KLADFGLA W
Sbjct: 119 C-HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQA--------WFGFAGT 169
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
P S LR K+ Y VD+++ G++L+ LL PF
Sbjct: 170 PGYLSPEVLR---KEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 182 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 234
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 235 G----YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ V E + G L ++ R KL A ++ +I+ A++ LH GII+RDLK DN+L
Sbjct: 128 LFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 185
Query: 82 LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKHYNNKVDV 140
L + +KL D+G+ + ++APE+ +GE Y VD
Sbjct: 186 LDS-EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL------RGED--YGFSVDW 236
Query: 141 YSFGIVLWELLTNRLPFE 158
++ G++++E++ R PF+
Sbjct: 237 WALGVLMFEMMAGRSPFD 254
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 56 LDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGL----------ARXXXXXXX 105
L I R ++ +HA G HRDLKP N+LL D+ L D G +R
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNILLG-DEGQPVLMDLGSMNQACIHVEGSRQALTLQD 199
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKH--YNNKVDVYSFGIVLWELLTNRLPFEGMSNL 163
+ APEL+S + H + + DV+S G VL+ ++ P++ +
Sbjct: 200 WAAQRCTISYRAPELFSV-------QSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK 252
Query: 164 QAAYAAAFKH--ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPP 221
+ A A ++ + P P S L ++ S DP+ RP ++ L A L+PP
Sbjct: 253 GDSVALAVQNQLSIPQSPRH-SSALWQLLNSMMTVDPHQRPHIPLLLSQLEA----LQPP 307
Query: 222 SPS 224
+P
Sbjct: 308 APG 310
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+A +IA A+ LH+ I++RDLKP+N+LL Q + L DFGL +
Sbjct: 144 YAAEIASALGYLHSLNIVYRDLKPENILLD-SQGHIVLTDFGLCKENIEHNSTTSTFCGT 202
Query: 114 -RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
++APE+ K+ Y+ VD + G VL+E+L PF
Sbjct: 203 PEYLAPEVL--------HKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 147 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWTLCGTPEY--LAPE----IILSK 199
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 200 G----YNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 23 VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLL 82
+ +T L M+L + + + L + FA I + +D LH N IIH DLKP+N+LL
Sbjct: 174 ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL 233
Query: 83 TPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVY 141
+S +K+ DFG + YR APE+ Y +D++
Sbjct: 234 KQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR--APEVILGA--------RYGMPIDMW 283
Query: 142 SFGIVLWELLTN 153
S G +L ELLT
Sbjct: 284 SLGCILAELLTG 295
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 154 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 206
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 207 G----YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 23 VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLL 82
+ +T L M+L + + + L + FA I + +D LH N IIH DLKP+N+LL
Sbjct: 174 ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL 233
Query: 83 TPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVY 141
+S +K+ DFG + YR APE+ Y +D++
Sbjct: 234 KQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR--APEVILGA--------RYGMPIDMW 283
Query: 142 SFGIVLWELLTN 153
S G +L ELLT
Sbjct: 284 SLGCILAELLTG 295
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+L+ + + L+L D+GLA
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 196 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 23 VIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLL 82
+ +T L M+L + + + L + FA I + +D LH N IIH DLKP+N+LL
Sbjct: 174 ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL 233
Query: 83 TPDQKS-LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVY 141
+S +K+ DFG + YR APE+ Y +D++
Sbjct: 234 KQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYR--APEVILGA--------RYGMPIDMW 283
Query: 142 SFGIVLWELLTN 153
S G +L ELLT
Sbjct: 284 SLGCILAELLTG 295
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NL++ Q +K+ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ V E + G L ++ R KL A ++ +I+ A++ LH GII+RDLK DN+L
Sbjct: 96 LFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 153
Query: 82 LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKHYNNKVDV 140
L + +KL D+G+ + ++APE+ +GE Y VD
Sbjct: 154 LDS-EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL------RGED--YGFSVDW 204
Query: 141 YSFGIVLWELLTNRLPFE 158
++ G++++E++ R PF+
Sbjct: 205 WALGVLMFEMMAGRSPFD 222
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 99/241 (41%), Gaps = 51/241 (21%)
Query: 5 VKHDNLVKFLGACK-----DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+KH+NL++F+ A K + + ++T SL YL + N + + + A ++
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMS 122
Query: 60 RAMDCLHAN-----------GIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXX 105
R + LH + I HRD K N+LL D ++ LADFGLA
Sbjct: 123 RGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGD 181
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-----------R 154
R+MAPE+ Q + ++D+Y+ G+VLWEL++
Sbjct: 182 THGQVGTRRYMAPEVLEGAINFQ---RDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYM 238
Query: 155 LPFE-------GMSNLQAAYAAAFKHARPGLPEDI--SPDLA---FIVQSCWVEDPNLRP 202
LPFE + LQ K RP + + P LA ++ CW D R
Sbjct: 239 LPFEEEIGQHPSLEELQE--VVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARL 296
Query: 203 S 203
S
Sbjct: 297 S 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NL++ Q +K+ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E +PG + +L R + A +A I + LH+
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 154 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 206
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 207 G----YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NL++ Q +++ DFGLA+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLMID-QQGYIQVTDFGLAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 10 LVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL-HA 67
+V F GA D + I E + G SL + L + ++ + ++ + + + L
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 68 NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLR 127
+ I+HRD+KP N+L+ + +KL DFG++ +M+PE
Sbjct: 143 HKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTR-SYMSPERL------ 194
Query: 128 QGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYA---AAFKHARPGLPEDI-S 183
+ HY+ + D++S G+ L E+ R P S A + P LP + S
Sbjct: 195 --QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFS 252
Query: 184 PDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ V C +++P R Q+ M++AF+
Sbjct: 253 LEFQDFVNKCLIKNPAERADLKQL--MVHAFI 282
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 196 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ V E + G L ++ R KL A ++ +I+ A++ LH GII+RDLK DN+L
Sbjct: 81 LFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 138
Query: 82 LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKHYNNKVDV 140
L + +KL D+G+ + ++APE+ +GE Y VD
Sbjct: 139 LDS-EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL------RGED--YGFSVDW 189
Query: 141 YSFGIVLWELLTNRLPFE 158
++ G++++E++ R PF+
Sbjct: 190 WALGVLMFEMMAGRSPFD 207
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 38 LVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFG-- 95
L+S ++L +A + ++ A+D +H +HRD+KPDN+L+ + ++LADFG
Sbjct: 164 LLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN-GHIRLADFGSC 222
Query: 96 LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL 155
L +++PE+ + +G K Y + D +S G+ ++E+L
Sbjct: 223 LKLMEDGTVQSSVAVGTPDYISPEILQAM---EGGKGRYGPECDWWSLGVCMYEMLYGET 279
Query: 156 PFEGMSNLQAAYAAAFKH 173
PF S L Y H
Sbjct: 280 PFYAES-LVETYGKIMNH 296
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 141 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 200
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 201 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 196 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 5 VKHDNLVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRP-NKLDLHVALNFALDIARAM 62
+KH N+V+ + ++ +V +L+ G L + +V+ ++ D ++ I ++
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH---QILESV 143
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRWMA--- 117
+ +H + I+HRDLKP+NLLL K ++KLADFGLA W
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--------IEVQGEQQAWFGFAG 195
Query: 118 -PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNL-QAAYAAAFKH 173
P S LR K Y VD+++ G++L+ LL PF E L Q A A+
Sbjct: 196 TPGYLSPEVLR---KDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 252
Query: 174 ARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P + ++P+ ++ +P R + Q ++
Sbjct: 253 PSPEW-DTVTPEAKNLINQMLTINPAKRITADQALK 287
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 196 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 196 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ +V E PG + +L R + A +A I + LH+ +I+RDLKP+NL+
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 82 LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVY 141
+ Q +K+ DFG A+ Y +APE + L +G YN VD +
Sbjct: 175 ID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSKG----YNKAVDWW 223
Query: 142 SFGIVLWELLTNRLPF 157
+ G++++E+ PF
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQ--KSLKLADFGLARXXXXXXXXXXXXXXYRWMAPEL-- 120
LH N I+H DLKP N+LL+ +K+ DFG++R ++APE+
Sbjct: 147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN 206
Query: 121 YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPE 180
Y +T D+++ GI+ + LLT+ PF G N Q Y E
Sbjct: 207 YDPIT----------TATDMWNIGIIAYMLLTHTSPFVGEDN-QETY-LNISQVNVDYSE 254
Query: 181 D----ISPDLAFIVQSCWVEDPNLRPS 203
+ +S +QS V++P RP+
Sbjct: 255 ETFSSVSQLATDFIQSLLVKNPEKRPT 281
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ V E + G L ++ R KL A ++ +I+ A++ LH GII+RDLK DN+L
Sbjct: 85 LFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 142
Query: 82 LTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELYSTVTLRQGEKKHYNNKVDV 140
L + +KL D+G+ + ++APE+ +GE Y VD
Sbjct: 143 LDS-EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL------RGED--YGFSVDW 193
Query: 141 YSFGIVLWELLTNRLPFE 158
++ G++++E++ R PF+
Sbjct: 194 WALGVLMFEMMAGRSPFD 211
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ +V E PG + +L R + A +A I + LH+ +I+RDLKP+NL+
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 82 LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVY 141
+ Q +K+ DFG A+ Y +APE + L +G YN VD +
Sbjct: 175 ID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSKG----YNKAVDWW 223
Query: 142 SFGIVLWELLTNRLPF 157
+ G++++E+ PF
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 196 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NL++ Q +K+ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 195 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 195 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 196 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 196 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 196 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 104/256 (40%), Gaps = 57/256 (22%)
Query: 5 VKHDNLVKFLGACK-----DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
+KH+N+++F+GA K D + ++T SL +L + N + + + A +A
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMA 131
Query: 60 RAMDCLHAN----------GIIHRDLKPDNLLLTPDQKSLKLADFGLA---RXXXXXXXX 106
R + LH + I HRD+K N+LL + + +ADFGLA
Sbjct: 132 RGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDT 190
Query: 107 XXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTN-----------RL 155
R+MAPE+ Q + ++D+Y+ G+VLWEL + L
Sbjct: 191 HGQVGTRRYMAPEVLEGAINFQ---RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247
Query: 156 PFE-------GMSNLQAAYAAAFKHARPGLPEDISPD-----LAFIVQSCWVEDPNLRPS 203
PFE + ++Q K RP L + L ++ CW D R S
Sbjct: 248 PFEEEIGQHPSLEDMQE--VVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305
Query: 204 -------FSQIIRMLN 212
+Q+ R+ N
Sbjct: 306 AGCVGERITQMQRLTN 321
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 196 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ +I +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 134 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 193
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL + Y+ +D++S G +L ++ + PF
Sbjct: 194 YFKGPELLVDYQM-------YDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 4 RVKHDNLVKFLGACKDPLMV-IVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAM 62
++KH ++++ +D V +V E+ + +YL + R + A +F I M
Sbjct: 67 QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGM 125
Query: 63 DCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY-RWMAPELY 121
LH++GI+HRDL NLLLT + ++K+ADFGLA +++PE+
Sbjct: 126 LYLHSHGILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI- 183
Query: 122 STVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE 158
+ + + DV+S G + + LL R PF+
Sbjct: 184 -------ATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
+ +V E PG + +L R + A +A I + LH+ +I+RDLKP+NL+
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 82 LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVY 141
+ Q +K+ DFG A+ Y +APE + L +G YN VD +
Sbjct: 175 ID-QQGYIKVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSKG----YNKAVDWW 223
Query: 142 SFGIVLWELLTNRLPF 157
+ G++++E+ PF
Sbjct: 224 ALGVLIYEMAAGYPPF 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E PG + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NL++ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLMID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 38 LVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFG-- 95
L+S +KL +A + ++ A+D +H +HRD+KPDN+LL + ++LADFG
Sbjct: 180 LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVN-GHIRLADFGSC 238
Query: 96 LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL 155
L +++PE+ + G+ Y + D +S G+ ++E+L
Sbjct: 239 LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK---YGPECDWWSLGVCMYEMLYGET 295
Query: 156 PFEGMSNLQAAYAAAFKHAR----PGLPEDISPDLAFIVQ 191
PF S L Y H P D+S + ++Q
Sbjct: 296 PFYAES-LVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQ 334
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 16/155 (10%)
Query: 61 AMDCLHANGIIHRDLKPDNLL---LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMA 117
A+ LH GI+HRDLKP+NLL L D K + ++DFGL++ ++A
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVA 186
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHA 174
PE+ + +K Y+ VD +S G++ + LL PF ++ + A ++
Sbjct: 187 PEVLA--------QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P +DIS ++ +DP R + Q ++
Sbjct: 239 SP-YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 16/155 (10%)
Query: 61 AMDCLHANGIIHRDLKPDNLL---LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMA 117
A+ LH GI+HRDLKP+NLL L D K + ++DFGL++ ++A
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVA 186
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHA 174
PE+ + +K Y+ VD +S G++ + LL PF ++ + A ++
Sbjct: 187 PEVLA--------QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P +DIS ++ +DP R + Q ++
Sbjct: 239 SP-YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 16/155 (10%)
Query: 61 AMDCLHANGIIHRDLKPDNLL---LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMA 117
A+ LH GI+HRDLKP+NLL L D K + ++DFGL++ ++A
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVA 186
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHA 174
PE+ + +K Y+ VD +S G++ + LL PF ++ + A ++
Sbjct: 187 PEVLA--------QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P +DIS ++ +DP R + Q ++
Sbjct: 239 SP-YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 16/155 (10%)
Query: 61 AMDCLHANGIIHRDLKPDNLL---LTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMA 117
A+ LH GI+HRDLKP+NLL L D K + ++DFGL++ ++A
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSK-IMISDFGLSKMEDPGSVLSTACGTPGYVA 186
Query: 118 PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSN---LQAAYAAAFKHA 174
PE+ + +K Y+ VD +S G++ + LL PF ++ + A ++
Sbjct: 187 PEVLA--------QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 175 RPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIR 209
P +DIS ++ +DP R + Q ++
Sbjct: 239 SP-YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 38 LVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFG-- 95
L+S +KL +A + ++ A+D +H +HRD+KPDN+LL + ++LADFG
Sbjct: 164 LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVN-GHIRLADFGSC 222
Query: 96 LARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRL 155
L +++PE+ + G+ Y + D +S G+ ++E+L
Sbjct: 223 LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK---YGPECDWWSLGVCMYEMLYGET 279
Query: 156 PFEGMSNLQAAYAAAFKHAR----PGLPEDISPDLAFIVQ 191
PF S L Y H P D+S + ++Q
Sbjct: 280 PFYAES-LVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQ 318
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Query: 5 VKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 63
++H N+V+F P + IV E G L + + + + A F + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVS 129
Query: 64 CLHANGIIHRDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 121
HA + HRDLK +N LL +P + LK+ FG ++ ++APE+
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPR-LKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 122 STVTLRQGEKKHYNNKV-DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--HARPGL 178
KK Y+ KV DV+S G+ L+ +L PFE + + + + +
Sbjct: 189 L--------KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 240
Query: 179 PE--DISPDLAFIVQSCWVEDPNLRPSFSQI 207
P+ ISP+ ++ +V DP R S +I
Sbjct: 241 PDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXX----- 112
I A+ +H+ GIIHR+LKP N+ + + +++K+ DFGLA+
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFI-DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 113 ----YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELL 151
+ Y + G HYN K+D YS GI+ +E +
Sbjct: 184 SDNLTSAIGTAXYVATEVLDG-TGHYNEKIDXYSLGIIFFEXI 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH I+HRDLKP+N+LL D ++KL DFG + ++APE+
Sbjct: 140 LHKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECS 198
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
Y +VD++S G++++ LL PF
Sbjct: 199 M--NDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Query: 5 VKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMD 63
++H N+V+F P + IV E G L + + + + A F + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVS 129
Query: 64 CLHANGIIHRDLKPDNLLL--TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELY 121
HA + HRDLK +N LL +P + LK+ FG ++ ++APE+
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPR-LKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVL 188
Query: 122 STVTLRQGEKKHYNNKV-DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK--HARPGL 178
KK Y+ KV DV+S G+ L+ +L PFE + + + + +
Sbjct: 189 L--------KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 240
Query: 179 PE--DISPDLAFIVQSCWVEDPNLRPSFSQI 207
P+ ISP+ ++ +V DP R S +I
Sbjct: 241 PDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH I+HRDLKP+N+LL D ++KL DFG + ++APE+
Sbjct: 127 LHKLNIVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 185
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
Y +VD++S G++++ LL PF
Sbjct: 186 M--NDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 65 LHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTV 124
LH I+HRDLKP+N+LL D ++KL DFG + ++APE+
Sbjct: 140 LHKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 198
Query: 125 TLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
Y +VD++S G++++ LL PF
Sbjct: 199 M--NDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRWM 116
A+ +H +GI+H DLKP N L+ LKL DFG+A +M
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 117 APELYSTVTLRQGE---KKHYNNKVDVYSFGIVLWELLTNRLPFE----GMSNLQAAYAA 169
PE ++ + K + K DV+S G +L+ + + PF+ +S L A
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ P +PE DL +++ C DP R S +++
Sbjct: 284 NHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 147
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ +Q +++ DFG A+ Y +APE + L +
Sbjct: 148 DLIYRDLKPENLLID-EQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 200
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 201 G----YNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXY 113
++ A+ +H +GI+H DLKP N L+ LKL DFG+A
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 114 RWMAPELYSTVTLRQGE---KKHYNNKVDVYSFGIVLWELLTNRLPFE----GMSNLQAA 166
+M PE ++ + K + K DV+S G +L+ + + PF+ +S L A
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 233
Query: 167 YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ P +PE DL +++ C DP R S +++
Sbjct: 234 IDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLAGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRWM 116
A+ +H +GI+H DLKP N L+ LKL DFG+A +M
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 117 APELYSTVTLRQGE---KKHYNNKVDVYSFGIVLWELLTNRLPFE----GMSNLQAAYAA 169
PE ++ + K + K DV+S G +L+ + + PF+ +S L A
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ P +PE DL +++ C DP R S +++
Sbjct: 284 NHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXYRWM 116
A+ +H +GI+H DLKP N L+ LKL DFG+A +M
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 117 APELYSTVTLRQGE---KKHYNNKVDVYSFGIVLWELLTNRLPFE----GMSNLQAAYAA 169
PE ++ + K + K DV+S G +L+ + + PF+ +S L A
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283
Query: 170 AFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ P +PE DL +++ C DP R S +++
Sbjct: 284 NHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLXGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXY 113
++ A+ +H +GI+H DLKP N L+ LKL DFG+A
Sbjct: 119 NMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 114 RWMAPELYSTVTLRQGE---KKHYNNKVDVYSFGIVLWELLTNRLPFE----GMSNLQAA 166
+M PE ++ + K + K DV+S G +L+ + + PF+ +S L A
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 236
Query: 167 YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ P +PE DL +++ C DP R S +++
Sbjct: 237 IDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 182 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGATWTLCGTPEY--LAPE----IILSK 234
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 235 G----YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXY 113
++ A+ +H +GI+H DLKP N L+ LKL DFG+A
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 114 RWMAPELYSTVTLRQGE---KKHYNNKVDVYSFGIVLWELLTNRLPFE----GMSNLQAA 166
+M PE ++ + K + K DV+S G +L+ + + PF+ +S L A
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 167 YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ P +PE DL +++ C DP R S +++
Sbjct: 253 IDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXX---XXXXXXXXXXXXY 113
++ A+ +H +GI+H DLKP N L+ LKL DFG+A
Sbjct: 115 NMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKDSQVGTV 172
Query: 114 RWMAPELYSTVTLRQGE---KKHYNNKVDVYSFGIVLWELLTNRLPFE----GMSNLQAA 166
+M PE ++ + K + K DV+S G +L+ + + PF+ +S L A
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 232
Query: 167 YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ P +PE DL +++ C DP R S +++
Sbjct: 233 IDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 18/189 (9%)
Query: 19 DPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPD 78
D ++I+ + P L ++ L +A +F + A+ H G++HRD+K +
Sbjct: 86 DSFVLILERMEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDE 143
Query: 79 NLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKV 138
N+L+ ++ LKL DFG +YS + + H
Sbjct: 144 NILIDLNRGELKLIDFGSGALLKDTVYTDFD-------GTRVYSPPEWIRYHRYH-GRSA 195
Query: 139 DVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDP 198
V+S GI+L++++ +PFE + + F R +S + +++ C P
Sbjct: 196 AVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQR------VSSECQHLIRWCLALRP 247
Query: 199 NLRPSFSQI 207
+ RP+F +I
Sbjct: 248 SDRPTFEEI 256
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 15/154 (9%)
Query: 34 LRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKS----L 89
L+KY+ P+ + + V +F + ++ H+ +HRDLKP NLLL+ S L
Sbjct: 119 LKKYM-DKNPD-VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVL 176
Query: 90 KLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE 149
K+ DFGLAR W P + L +HY+ VD++S + E
Sbjct: 177 KIGDFGLARAFGIPIRQFTHEIITLWYRP---PEILLGS---RHYSTSVDIWSIACIWAE 230
Query: 150 LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDIS 183
+L F G S + + GLP+D +
Sbjct: 231 MLMKTPLFPGDSEIDQLFKI---FEVLGLPDDTT 261
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 162 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 214
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 215 G----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++E+ PF
Sbjct: 214 G----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
F I + LH G++HRDL P N+LL D + + DF LAR
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLA-DNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
+ APEL + K + VD++S G V+ E+ + F G
Sbjct: 198 WYRAPELVM-------QFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 20/221 (9%)
Query: 10 LVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL-HA 67
+V F GA D + I E + G SL + L + ++ + ++ + R + L
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREK 133
Query: 68 NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLR 127
+ I+HRD+KP N+L+ + +KL DFG++ +MAPE
Sbjct: 134 HQIMHRDVKPSNILVN-SRGEIKLCDFGVS-GQLIDSMANSFVGTRSYMAPERL------ 185
Query: 128 QGEKKHYNNKVDVYSFGIVLWELLTNRLPF--EGMSNLQAAYAAAFKHARPGLPEDISPD 185
QG HY+ + D++S G+ L EL R P L+A + G P ISP
Sbjct: 186 QG--THYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPR 243
Query: 186 LAFIVQSCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSPSVP 226
+ + RP+ + I +L+ + + P P +P
Sbjct: 244 PRPPGRPVSGHGMDSRPAMA-IFELLD---YIVNEPPPKLP 280
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 54/251 (21%)
Query: 5 VKHDNLVKFLGA-----CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++H+N++ F+ + + ++T SL YL + LD L L IA
Sbjct: 88 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIA 144
Query: 60 RAMDCLHAN--------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-- 109
+ LH I HRDLK N+L+ + + +AD GLA
Sbjct: 145 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC-IADLGLAVMHSQSTNQLDVGN 203
Query: 110 ---XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE----------------- 149
R+MAPE+ Q + +VD+++FG+VLWE
Sbjct: 204 NPRVGTKRYMAPEVLDETI--QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 261
Query: 150 ---LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPD-----LAFIVQSCWVEDPNLR 201
++ N FE M + RP +P D LA +++ CW ++P+ R
Sbjct: 262 FYDVVPNDPSFEDMRKV-----VCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
Query: 202 PSFSQIIRMLN 212
+ +I + L
Sbjct: 317 LTALRIKKTLT 327
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
F I + LH G++HRDL P N+LL D + + DF LAR
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLA-DNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
+ APEL + K + VD++S G V+ E+ + F G
Sbjct: 198 WYRAPELVM-------QFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 58 IARAMDCLHANGIIHRDLKPDNLLLTPDQK--SLKLADFGLARXXXXXXXXXXXXXXYRW 115
I A+ H G++HRDLKP+NLLL K ++KLADFGLA W
Sbjct: 130 ILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA--------W 181
Query: 116 MA----PELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
P S LR K Y VD+++ G++L+ LL PF
Sbjct: 182 FGFAGTPGYLSPEVLR---KDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 57 DIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXX---XXXXXXXXXXXY 113
++ A+ +H +GI+H DLKP N L+ LKL DFG+A
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDXXXVVKDSQVGTV 192
Query: 114 RWMAPELYSTVTLRQGE---KKHYNNKVDVYSFGIVLWELLTNRLPFE----GMSNLQAA 166
+M PE ++ + K + K DV+S G +L+ + + PF+ +S L A
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 167 YAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQII 208
+ P +PE DL +++ C DP R S +++
Sbjct: 253 IDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +V H N++ ++ +V++ EL+ G L +L + L A +F I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQIL 125
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWM 116
++ LH I H DLKP+N++L +KL DFGLA ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 117 APEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE+ Y + L + D++S G++ + LL+ PF G
Sbjct: 186 APEIVNYEPLGL----------EADMWSIGVITYILLSGASPFLG 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+A I + LH+ +I+RDLKP+NLL+ Q +++ DFG A+ Y
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY 225
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+APE + L +G YN VD ++ G++++E+ PF
Sbjct: 226 --LAPE----IILSKG----YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 54/251 (21%)
Query: 5 VKHDNLVKFLGA-----CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++H+N++ F+ + + ++T SL YL + LD L L IA
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIA 115
Query: 60 RAMDCLHAN--------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-- 109
+ LH I HRDLK N+L+ + + +AD GLA
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC-IADLGLAVMHSQSTNQLDVGN 174
Query: 110 ---XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE----------------- 149
R+MAPE+ Q + +VD+++FG+VLWE
Sbjct: 175 NPRVGTKRYMAPEVLDETI--QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232
Query: 150 ---LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPD-----LAFIVQSCWVEDPNLR 201
++ N FE M + RP +P D LA +++ CW ++P+ R
Sbjct: 233 FYDVVPNDPSFEDMRKV-----VCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
Query: 202 PSFSQIIRMLN 212
+ +I + L
Sbjct: 288 LTALRIKKTLT 298
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 98/239 (41%), Gaps = 36/239 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNK---LDLHVALNFAL 56
M+S H NL++ G C P ++V + S+ L RP LD AL
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRIAL 146
Query: 57 DIARAMDCLHAN---GIIHRDLKPDNLLLTPDQKSLKLADFGLARXX--XXXXXXXXXXX 111
AR + LH + IIHRD+K N+LL + +++ + DFGLA+
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRG 205
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE------------- 158
+APE ST + K DV+ +G++L EL+T + F+
Sbjct: 206 TIGHIAPEYLST--------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 159 ----GMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA 213
G+ + A + ++ L + C P RP S+++RML
Sbjct: 258 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 54/251 (21%)
Query: 5 VKHDNLVKFLGA-----CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++H+N++ F+ + + ++T SL YL + LD L L IA
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIA 115
Query: 60 RAMDCLHAN--------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXX-- 109
+ LH I HRDLK N+L+ + + +AD GLA
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC-IADLGLAVMHSQSTNQLDVGN 174
Query: 110 ---XXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWE----------------- 149
R+MAPE+ Q + +VD+++FG+VLWE
Sbjct: 175 NPRVGTKRYMAPEVLDETI--QVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232
Query: 150 ---LLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDISPD-----LAFIVQSCWVEDPNLR 201
++ N FE M + RP +P D LA +++ CW ++P+ R
Sbjct: 233 FYDVVPNDPSFEDMRKV-----VCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
Query: 202 PSFSQIIRMLN 212
+ +I + L
Sbjct: 288 LTALRIKKTLT 298
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+A I + LH+ +I+RDLKP+NLL+ Q +++ DFG A+ Y
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY 204
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+APE + L +G YN VD ++ G++++E+ PF
Sbjct: 205 --LAPE----IILSKG----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNK---LDLHVALNFAL 56
M+S H NL++ G C P ++V + S+ L RP LD AL
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRIAL 138
Query: 57 DIARAMDCLHAN---GIIHRDLKPDNLLLTPDQKSLKLADFGLARXX--XXXXXXXXXXX 111
AR + LH + IIHRD+K N+LL + +++ + DFGLA+
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRG 197
Query: 112 XYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFE------------- 158
+APE ST + K DV+ +G++L EL+T + F+
Sbjct: 198 XIGHIAPEYLST--------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 159 ----GMSNLQAAYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQIIRMLNA 213
G+ + A + ++ L + C P RP S+++RML
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+A I + LH+ +I+RDLKP+NLL+ Q +++ DFG A+ Y
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY 204
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+APE + L +G YN VD ++ G++++E+ PF
Sbjct: 205 --LAPE----IILSKG----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+A I + LH+ +I+RDLKP+NLL+ Q +++ DFG A+ Y
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY 204
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+APE + L +G YN VD ++ G++++E+ PF
Sbjct: 205 --LAPE----IILSKG----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+A I + LH+ +I+RDLKP+NLL+ Q +++ DFG A+ Y
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY 204
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+APE + L +G YN VD ++ G++++E+ PF
Sbjct: 205 --LAPE----IILSKG----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 42 RPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLT---PDQKSLKLADFGLAR 98
+P +L + + I + LHAN ++HRDLKP N+L+ P++ +K+AD G AR
Sbjct: 121 KPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180
Query: 99 XXXX----XXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNR 154
+ + APEL +HY +D+++ G + ELLT+
Sbjct: 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGA-------RHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+A I + LH+ +I+RDLKP+NLL+ Q +++ DFG A+ Y
Sbjct: 141 YAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY 199
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+APE + L +G YN VD ++ G++++E+ PF
Sbjct: 200 --LAPE----IILSKG----YNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 41/212 (19%)
Query: 22 MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLL 81
++IV E L G L + A I A+ LH+ I HRD+KP+NLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 82 LTPDQKS--LKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVD 139
T + + LKL DFG A+ GEK Y+ D
Sbjct: 150 YTSKRPNAILKLTDFGFAKETT---------------------------GEK--YDKSCD 180
Query: 140 VYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFK-HARPGLPE-------DISPDLAFIVQ 191
++S G++++ LL PF SN A + K R G E ++S ++ +++
Sbjct: 181 MWSLGVIMYILLCGYPPF--YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 238
Query: 192 SCWVEDPNLRPSFSQIIRMLNAFLFTLRPPSP 223
+ +P R + ++ + T P +P
Sbjct: 239 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 270
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +V H N++ ++ +V++ EL+ G L +L + L A +F I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQIL 125
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWM 116
++ LH I H DLKP+N++L +KL DFGLA ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 117 APEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE+ Y + L + D++S G++ + LL+ PF G
Sbjct: 186 APEIVNYEPLGL----------EADMWSIGVITYILLSGASPFLG 220
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +V H N++ ++ +V++ EL+ G L +L + L A +F I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQIL 125
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWM 116
++ LH I H DLKP+N++L +KL DFGLA ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 117 APEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE+ Y + L + D++S G++ + LL+ PF G
Sbjct: 186 APEIVNYEPLGL----------EADMWSIGVITYILLSGASPFLG 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +V H N++ ++ +V++ EL+ G L +L + L A +F I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQIL 125
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWM 116
++ LH I H DLKP+N++L +KL DFGLA ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 117 APEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE+ Y + L + D++S G++ + LL+ PF G
Sbjct: 186 APEIVNYEPLGL----------EADMWSIGVITYILLSGASPFLG 220
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +V H N++ ++ +V++ EL+ G L +L + L A +F I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQIL 125
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWM 116
++ LH I H DLKP+N++L +KL DFGLA ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 117 APEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE+ Y + L + D++S G++ + LL+ PF G
Sbjct: 186 APEIVNYEPLGL----------EADMWSIGVITYILLSGASPFLG 220
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NL++ Q +++ DFG A+ Y +APE+ +
Sbjct: 161 DLIYRDLKPENLIID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPEIIIS----- 212
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
K YN VD ++ G++++E+ PF
Sbjct: 213 ---KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+YS + + H V+S GI+L++++ +PFE + +
Sbjct: 172 TDFD-------GTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE--HDEEI 221
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 222 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 205
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 206 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 255
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 256 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 110 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 169
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+YS + + H V+S GI+L++++ +PFE + +
Sbjct: 170 TDFD-------GTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE--HDEEI 219
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 220 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 172 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 221
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 222 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 166
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+YS + + H V+S GI+L++++ +PFE + +
Sbjct: 167 TDFD-------GTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE--HDEEI 216
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 217 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 166
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+YS + + H V+S GI+L++++ +PFE + +
Sbjct: 167 TDFD-------GTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE--HDEEI 216
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 217 IRGQVFFRQR------VSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 24/212 (11%)
Query: 10 LVKFLGA-CKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCL-HA 67
+V F GA D + I E + G SL + L + ++ + ++ + + + L
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 68 NGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLR 127
+ I+HRD+KP N+L+ + +KL DFG++ MA E T +
Sbjct: 127 HKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDE------------MANEFVGTRSYM 173
Query: 128 QGEK---KHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQAAYAAAFKHARPGLPEDI-S 183
E+ HY+ + D++S G+ L E+ R P M+ + P LP + S
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFE-LLDYIVNEPPPKLPSAVFS 232
Query: 184 PDLAFIVQSCWVEDPNLRPSFSQIIRMLNAFL 215
+ V C +++P R Q+ M++AF+
Sbjct: 233 LEFQDFVNKCLIKNPAERADLKQL--MVHAFI 262
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ ++H N++ ++ +V++ EL+ G L +L L A F I
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQIL 118
Query: 60 RAMDCLHANGIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 115
+ LH+ I H DLKP+N++L P+ + +KL DFG+A +
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEAGNEFKNIFGTPEF 177
Query: 116 MAPEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQ-----AAYA 168
+APE+ Y + L + D++S G++ + LL+ PF G + + +A
Sbjct: 178 VAPEIVNYEPLGL----------EADMWSIGVITYILLSGASPFLGETKQETLTNISAVN 227
Query: 169 AAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQ 206
F +++ D ++ V+DP R + +Q
Sbjct: 228 YDFDEEYFSNTSELAKDF---IRRLLVKDPKRRMTIAQ 262
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+YS + + H V+S GI+L++++ +PFE + +
Sbjct: 172 TDFD-------GTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE--HDEEI 221
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 222 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ +V H N++ ++ +V++ EL+ G L +L + L A +F I
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQIL 125
Query: 60 RAMDCLHANGIIHRDLKPDNLLLTPDQ---KSLKLADFGLARXXXXXXXXXXXXXXYRWM 116
++ LH I H DLKP+N++L +KL DFGLA ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 117 APEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEG 159
APE+ Y + L + D++S G++ + LL+ PF G
Sbjct: 186 APEIVNYEPLGL----------EADMWSIGVITYILLSGASPFLG 220
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 186
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 187 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 236
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 237 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ ++ +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 151 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 210
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL V L+ Y+ +D++S G + ++ + PF
Sbjct: 211 YFKGPEL--LVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 170
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+YS + + H V+S GI+L++++ +PFE + +
Sbjct: 171 TDFD-------GTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE--HDEEI 220
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 221 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 199 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 248
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 249 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 134 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 193
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 194 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 243
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 244 IRGQVFFRQR------VSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 89/237 (37%), Gaps = 48/237 (20%)
Query: 5 VKHDNLVKFL-----GACKDPLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++H+N++ F+ G + ++T+ SL YL S LD L A
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSV 144
Query: 60 RAMDCLHAN--------GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXX---- 107
+ LH I HRDLK N+L+ + + +AD GLA
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVKFISDTNEVDIPP 203
Query: 108 -XXXXXYRWMAPELYSTVTLRQGEKKHYNNKV--DVYSFGIVLWELLTN----------R 154
R+M PE+ R H+ + + D+YSFG++LWE+ +
Sbjct: 204 NTRVGTKRYMPPEVLDESLNRN----HFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259
Query: 155 LPFEGMSNLQAAYA-----AAFKHARPGLPEDISPD-----LAFIVQSCWVEDPNLR 201
LP+ + +Y K RP P S D + ++ CW +P R
Sbjct: 260 LPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 214 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 263
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 264 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 185
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 186 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 235
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 236 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 166
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+YS + + H V+S GI+L++++ +PFE + +
Sbjct: 167 TDFD-------GTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE--HDEEI 216
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 217 IGGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 159 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 218
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 219 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 268
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 269 IRGQVFFRQR------VSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 10 LVKFLGACKD-PLMVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIARAMDCLHAN 68
LVK + KD + +V E + G + +L R + A +A I + LH+
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
+I+RDLKP+NLL+ Q +++ DFG A+ Y +APE + L +
Sbjct: 161 DLIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTWXLCGTPEY--LAPE----IILSK 213
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G YN VD ++ G++++++ PF
Sbjct: 214 G----YNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ ++ +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 132 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 191
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL V L+ Y+ +D++S G + ++ + PF
Sbjct: 192 YFKGPEL--LVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 214 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 263
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 264 IRGQVFFRQR------VSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ ++ +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL V L+ Y+ +D++S G + ++ + PF
Sbjct: 191 YFKGPEL--LVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 186
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 187 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 236
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 237 IRGQVFFRQR------VSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ ++ +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL V L+ Y+ +D++S G + ++ + PF
Sbjct: 191 YFKGPEL--LVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 185
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 186 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 235
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 236 IRGQVFFRQR------VSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ ++ +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL V L+ Y+ +D++S G + ++ + PF
Sbjct: 190 YFKGPEL--LVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 200 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 249
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 250 IGGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ ++ +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL V L+ Y+ +D++S G + ++ + PF
Sbjct: 190 YFKGPEL--LVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 200 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 249
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 250 IGGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ ++ +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL V L+ Y+ +D++S G + ++ + PF
Sbjct: 190 YFKGPEL--LVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 199 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 248
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 249 IGGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+YS + + H V+S GI+L++++ +PFE + +
Sbjct: 214 TDFD-------GTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMVCGDIPFE--HDEEI 263
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 264 IRGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 199 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 248
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 249 IGGQVFFRQR------VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ ++ +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL V L+ Y+ +D++S G + ++ + PF
Sbjct: 190 YFKGPEL--LVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ ++ +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL V L+ Y+ +D++S G + ++ + PF
Sbjct: 190 YFKGPEL--LVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 69 GIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXYRWMAPELYSTVTLRQ 128
I HRD+KP N+L+ + + +KL+DFG + Y +M PE +S +
Sbjct: 172 NICHRDVKPSNILMDKNGR-VKLSDFGESEYMVDKKIKGSRGT-YEFMPPEFFSNESSYN 229
Query: 129 GEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
G K VD++S GI L+ + N +PF
Sbjct: 230 GAK------VDIWSLGICLYVMFYNVVPF 252
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 54 FALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXXXXXXXXXY 113
+ ++ +A+D H+ GI+HRD+KP N+++ + + L+L D+GLA
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 114 RWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPF 157
+ PEL V L+ Y+ +D++S G + ++ + PF
Sbjct: 190 YFKGPEL--LVDLQD-----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 200 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 249
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 250 IGGQVFFRQR------VSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 200 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 249
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 250 IGGQVFFRQR------VSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 46 LDLHVALNFALDIARAMDCLHANGIIHRDLKPDNLLLTPDQKSLKLADFGLARXXXXXXX 105
L +A +F + A+ H G++HRD+K +N+L+ ++ LKL DFG
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 106 XXXXXXXYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+ PE +++ V+S GI+L++++ +PFE + +
Sbjct: 199 TDFDGTRV-YSPPEWIRY-------HRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEI 248
Query: 166 AYAAAFKHARPGLPEDISPDLAFIVQSCWVEDPNLRPSFSQI 207
F R +S + +++ C P+ RP+F +I
Sbjct: 249 IGGQVFFRQR------VSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 1 MMSRVKHDNLVKFLGACKDPL-MVIVTELLPGMSLRKYLVSLRPNKLDLHVALNFALDIA 59
++ ++H N++ ++ +V++ EL+ G L +L L A F I
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQIL 125
Query: 60 RAMDCLHANGIIHRDLKPDNLLL----TPDQKSLKLADFGLARXXXXXXXXXXXXXXYRW 115
+ LH+ I H DLKP+N++L P+ + +KL DFG+A +
Sbjct: 126 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEAGNEFKNIFGTPEF 184
Query: 116 MAPEL--YSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRLPFEGMSNLQA 165
+APE+ Y + L + D++S G++ + LL+ PF G + +
Sbjct: 185 VAPEIVNYEPLGL----------EADMWSIGVITYILLSGASPFLGETKQET 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,292,053
Number of Sequences: 62578
Number of extensions: 272810
Number of successful extensions: 3449
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 582
Number of HSP's gapped (non-prelim): 1150
length of query: 268
length of database: 14,973,337
effective HSP length: 97
effective length of query: 171
effective length of database: 8,903,271
effective search space: 1522459341
effective search space used: 1522459341
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)