Query 024411
Match_columns 268
No_of_seqs 130 out of 1988
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 04:24:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024411.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024411hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0604 Qor NADPH:quinone redu 100.0 1.8E-43 3.9E-48 289.3 26.5 255 3-266 62-326 (326)
2 COG1064 AdhP Zn-dependent alco 100.0 2.3E-42 5.1E-47 276.4 24.1 244 5-267 64-338 (339)
3 KOG1197 Predicted quinone oxid 100.0 4E-42 8.7E-47 258.0 21.6 257 2-267 68-331 (336)
4 PLN03154 putative allyl alcoho 100.0 7.1E-41 1.5E-45 278.8 28.5 264 4-267 80-346 (348)
5 COG2130 Putative NADP-dependen 100.0 2.1E-40 4.6E-45 255.3 26.3 264 4-268 75-340 (340)
6 cd08295 double_bond_reductase_ 100.0 2.2E-38 4.7E-43 263.6 28.9 263 4-266 75-338 (338)
7 KOG0024 Sorbitol dehydrogenase 100.0 1.1E-37 2.3E-42 242.7 22.1 247 5-268 68-354 (354)
8 KOG1196 Predicted NAD-dependen 100.0 1.1E-36 2.4E-41 234.0 24.0 266 2-267 73-341 (343)
9 cd08293 PTGR2 Prostaglandin re 100.0 4.6E-36 1E-40 250.5 28.1 261 4-266 74-345 (345)
10 cd08294 leukotriene_B4_DH_like 100.0 1E-35 2.3E-40 246.8 28.2 260 4-266 62-329 (329)
11 cd08281 liver_ADH_like1 Zinc-d 100.0 8.4E-36 1.8E-40 250.8 27.5 250 4-264 67-371 (371)
12 KOG0023 Alcohol dehydrogenase, 100.0 1.9E-36 4E-41 235.3 21.1 245 5-267 72-355 (360)
13 COG1062 AdhC Zn-dependent alco 100.0 1.9E-36 4.1E-41 237.8 20.6 248 5-264 62-364 (366)
14 TIGR02825 B4_12hDH leukotriene 100.0 2.4E-35 5.2E-40 244.1 27.8 257 4-265 63-325 (325)
15 cd08239 THR_DH_like L-threonin 100.0 1.9E-35 4.1E-40 246.2 27.1 244 4-266 60-339 (339)
16 cd08291 ETR_like_1 2-enoyl thi 100.0 1.1E-34 2.4E-39 240.1 26.3 250 4-264 66-323 (324)
17 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.3E-34 2.9E-39 242.5 26.7 250 4-265 60-357 (358)
18 PLN02827 Alcohol dehydrogenase 100.0 2.3E-34 5E-39 242.2 27.5 252 4-268 69-378 (378)
19 PRK09880 L-idonate 5-dehydroge 100.0 1.7E-34 3.7E-39 240.5 25.7 240 4-266 65-343 (343)
20 PLN02586 probable cinnamyl alc 100.0 2.4E-34 5.2E-39 240.7 26.1 242 4-266 72-353 (360)
21 KOG1198 Zinc-binding oxidoredu 100.0 7.4E-35 1.6E-39 238.6 21.6 257 4-267 71-346 (347)
22 PRK10309 galactitol-1-phosphat 100.0 5.1E-34 1.1E-38 238.2 26.1 252 4-266 59-346 (347)
23 PLN02178 cinnamyl-alcohol dehy 100.0 6.2E-34 1.3E-38 238.9 26.3 242 4-266 66-348 (375)
24 PLN02740 Alcohol dehydrogenase 100.0 1.3E-33 2.8E-38 238.2 26.4 251 4-266 71-381 (381)
25 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.4E-33 5.3E-38 235.5 27.5 251 4-266 61-368 (368)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.9E-33 4.1E-38 232.6 26.3 235 4-264 62-328 (329)
27 cd08233 butanediol_DH_like (2R 100.0 2.9E-33 6.3E-38 234.0 26.0 243 4-264 70-350 (351)
28 cd08301 alcohol_DH_plants Plan 100.0 6.2E-33 1.3E-37 233.4 27.4 249 4-264 62-368 (369)
29 PLN02514 cinnamyl-alcohol dehy 100.0 6.3E-33 1.4E-37 232.1 27.1 244 4-267 69-351 (357)
30 cd08300 alcohol_DH_class_III c 100.0 6.8E-33 1.5E-37 233.0 26.9 250 4-265 62-368 (368)
31 cd08292 ETR_like_2 2-enoyl thi 100.0 6.4E-33 1.4E-37 229.6 25.8 252 4-265 64-324 (324)
32 TIGR03201 dearomat_had 6-hydro 100.0 8.4E-33 1.8E-37 230.9 26.4 245 4-266 59-349 (349)
33 KOG0022 Alcohol dehydrogenase, 100.0 4.6E-33 1E-37 215.5 21.5 249 5-265 68-374 (375)
34 cd08277 liver_alcohol_DH_like 100.0 2.2E-32 4.8E-37 229.6 26.9 248 4-264 61-364 (365)
35 cd08231 MDR_TM0436_like Hypoth 100.0 5.1E-32 1.1E-36 227.4 26.4 248 4-266 60-361 (361)
36 cd08238 sorbose_phosphate_red 100.0 4.9E-32 1.1E-36 230.5 26.4 250 4-267 68-369 (410)
37 cd08246 crotonyl_coA_red croto 100.0 1.2E-31 2.5E-36 227.5 27.1 248 4-264 87-391 (393)
38 cd08244 MDR_enoyl_red Possible 100.0 1.6E-31 3.4E-36 221.3 27.2 253 4-266 65-324 (324)
39 KOG0025 Zn2+-binding dehydroge 100.0 3.7E-32 7.9E-37 208.0 21.4 255 4-266 83-352 (354)
40 cd08296 CAD_like Cinnamyl alco 100.0 1.6E-31 3.4E-36 222.0 26.6 242 4-265 60-333 (333)
41 cd08274 MDR9 Medium chain dehy 100.0 1.9E-31 4.1E-36 223.2 26.6 245 4-266 83-350 (350)
42 cd05288 PGDH Prostaglandin deh 100.0 2.9E-31 6.3E-36 220.2 26.1 256 4-264 70-329 (329)
43 cd05282 ETR_like 2-enoyl thioe 100.0 3.4E-31 7.3E-36 219.2 25.8 253 4-265 62-323 (323)
44 PTZ00354 alcohol dehydrogenase 100.0 5.5E-31 1.2E-35 218.9 27.0 256 4-267 64-329 (334)
45 cd08290 ETR 2-enoyl thioester 100.0 2.9E-31 6.4E-36 221.2 25.3 255 4-266 69-341 (341)
46 cd08297 CAD3 Cinnamyl alcohol 100.0 1.1E-30 2.5E-35 217.7 28.2 247 4-266 62-341 (341)
47 TIGR02817 adh_fam_1 zinc-bindi 100.0 6.8E-31 1.5E-35 218.6 26.7 248 4-265 64-334 (336)
48 TIGR01751 crot-CoA-red crotony 100.0 1E-30 2.3E-35 221.9 27.5 251 4-267 83-388 (398)
49 cd08230 glucose_DH Glucose deh 100.0 2.6E-31 5.6E-36 222.5 23.2 240 4-266 63-355 (355)
50 cd08237 ribitol-5-phosphate_DH 100.0 2.7E-31 5.8E-36 220.9 22.7 234 4-267 64-340 (341)
51 COG1063 Tdh Threonine dehydrog 100.0 9.2E-31 2E-35 217.2 25.0 248 4-266 61-350 (350)
52 TIGR01202 bchC 2-desacetyl-2-h 100.0 2.6E-31 5.6E-36 218.0 21.2 229 4-265 64-308 (308)
53 TIGR02819 fdhA_non_GSH formald 100.0 9.7E-31 2.1E-35 220.6 25.2 252 4-267 67-391 (393)
54 cd05284 arabinose_DH_like D-ar 100.0 2E-30 4.4E-35 216.1 26.5 244 4-266 63-340 (340)
55 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2.1E-30 4.6E-35 218.0 26.5 249 4-265 59-367 (367)
56 TIGR03366 HpnZ_proposed putati 100.0 8.4E-31 1.8E-35 212.3 22.7 226 4-246 4-280 (280)
57 cd08260 Zn_ADH6 Alcohol dehydr 100.0 5.3E-30 1.1E-34 214.0 26.9 249 4-265 60-344 (345)
58 cd08261 Zn_ADH7 Alcohol dehydr 100.0 6.3E-30 1.4E-34 212.8 27.2 244 4-266 59-337 (337)
59 cd08270 MDR4 Medium chain dehy 100.0 5.3E-30 1.2E-34 210.4 26.1 244 4-266 57-305 (305)
60 cd08250 Mgc45594_like Mgc45594 100.0 7.4E-30 1.6E-34 211.8 26.8 256 4-265 66-329 (329)
61 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.1E-30 1.1E-34 214.5 26.0 246 4-265 72-349 (350)
62 PRK10754 quinone oxidoreductas 100.0 1.2E-29 2.7E-34 210.2 26.7 253 4-265 63-326 (327)
63 cd08283 FDH_like_1 Glutathione 100.0 1.1E-29 2.5E-34 214.6 26.9 248 4-266 60-386 (386)
64 cd08285 NADP_ADH NADP(H)-depen 100.0 1.1E-29 2.5E-34 212.4 26.3 249 4-266 59-351 (351)
65 cd08243 quinone_oxidoreductase 100.0 8.8E-30 1.9E-34 210.4 25.1 249 4-264 62-319 (320)
66 cd08278 benzyl_alcohol_DH Benz 100.0 1.2E-29 2.5E-34 213.2 26.1 249 4-264 61-364 (365)
67 PRK09422 ethanol-active dehydr 100.0 1.7E-29 3.7E-34 210.3 26.6 245 4-267 59-337 (338)
68 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 2.1E-29 4.5E-34 209.8 27.0 245 4-266 62-338 (338)
69 cd05278 FDH_like Formaldehyde 100.0 1.1E-29 2.3E-34 212.3 25.1 247 4-266 60-347 (347)
70 cd05286 QOR2 Quinone oxidoredu 100.0 3.1E-29 6.7E-34 206.8 27.3 254 4-266 60-320 (320)
71 cd08235 iditol_2_DH_like L-idi 100.0 2.2E-29 4.7E-34 210.1 26.4 245 4-265 59-343 (343)
72 cd05285 sorbitol_DH Sorbitol d 100.0 2.3E-29 4.9E-34 210.0 25.7 243 4-265 60-342 (343)
73 cd08284 FDH_like_2 Glutathione 100.0 3.6E-29 7.8E-34 208.9 26.1 244 4-265 59-343 (344)
74 cd08262 Zn_ADH8 Alcohol dehydr 100.0 3E-29 6.5E-34 209.1 25.4 244 4-265 69-341 (341)
75 cd08286 FDH_like_ADH2 formalde 100.0 5.5E-29 1.2E-33 207.8 26.8 246 4-266 60-345 (345)
76 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 6E-29 1.3E-33 205.9 26.7 250 4-266 63-325 (325)
77 cd08289 MDR_yhfp_like Yhfp put 100.0 4.1E-29 8.8E-34 207.1 25.3 251 4-266 63-326 (326)
78 cd08279 Zn_ADH_class_III Class 100.0 6.5E-29 1.4E-33 208.6 26.8 249 4-263 59-362 (363)
79 PRK13771 putative alcohol dehy 100.0 4.8E-29 1.1E-33 207.3 25.8 244 4-266 60-333 (334)
80 cd08236 sugar_DH NAD(P)-depend 100.0 5.7E-29 1.2E-33 207.6 26.2 250 4-264 58-343 (343)
81 cd08269 Zn_ADH9 Alcohol dehydr 100.0 7.7E-29 1.7E-33 204.2 26.5 247 4-264 57-311 (312)
82 cd08251 polyketide_synthase po 100.0 4.6E-29 1E-33 204.4 24.9 251 4-264 43-303 (303)
83 cd05283 CAD1 Cinnamyl alcohol 100.0 6.5E-29 1.4E-33 206.7 25.4 240 4-265 59-337 (337)
84 cd08253 zeta_crystallin Zeta-c 100.0 1E-28 2.2E-33 204.2 26.4 253 4-266 63-325 (325)
85 cd08249 enoyl_reductase_like e 100.0 3.6E-29 7.9E-34 208.3 23.6 246 4-266 60-339 (339)
86 cd08276 MDR7 Medium chain dehy 100.0 1.4E-28 3E-33 204.6 27.1 248 4-266 63-336 (336)
87 cd05279 Zn_ADH1 Liver alcohol 100.0 1.1E-28 2.4E-33 207.2 26.6 249 4-264 59-364 (365)
88 cd08266 Zn_ADH_like1 Alcohol d 100.0 2.1E-28 4.5E-33 203.9 28.0 249 4-266 63-342 (342)
89 TIGR02823 oxido_YhdH putative 100.0 2E-28 4.3E-33 202.7 27.1 248 5-266 63-323 (323)
90 PRK05396 tdh L-threonine 3-deh 100.0 1.4E-28 3E-33 205.1 25.9 245 4-267 63-341 (341)
91 PRK10083 putative oxidoreducta 100.0 1.5E-28 3.3E-33 204.7 26.2 244 4-268 59-339 (339)
92 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.6E-28 3.4E-33 207.6 26.1 247 4-264 93-383 (384)
93 cd08259 Zn_ADH5 Alcohol dehydr 100.0 2.8E-28 6.1E-33 202.5 27.1 243 4-265 60-332 (332)
94 cd08282 PFDH_like Pseudomonas 100.0 2E-28 4.3E-33 206.4 26.1 251 4-266 59-375 (375)
95 cd05276 p53_inducible_oxidored 100.0 1.7E-28 3.6E-33 202.7 25.2 252 4-264 63-323 (323)
96 TIGR00692 tdh L-threonine 3-de 100.0 2E-28 4.4E-33 204.0 25.8 244 4-266 61-340 (340)
97 cd08232 idonate-5-DH L-idonate 100.0 2.9E-28 6.2E-33 203.1 26.1 240 4-266 59-339 (339)
98 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2.7E-28 5.9E-33 204.0 25.7 242 4-264 68-350 (350)
99 cd05195 enoyl_red enoyl reduct 100.0 2.1E-28 4.5E-33 199.2 24.2 252 4-264 33-293 (293)
100 cd08299 alcohol_DH_class_I_II_ 100.0 5E-28 1.1E-32 203.6 27.1 251 4-266 66-373 (373)
101 smart00829 PKS_ER Enoylreducta 100.0 2.3E-28 4.9E-33 198.7 24.1 252 4-264 29-288 (288)
102 cd08268 MDR2 Medium chain dehy 100.0 7.2E-28 1.6E-32 199.4 27.4 254 4-266 63-328 (328)
103 cd08287 FDH_like_ADH3 formalde 100.0 4.7E-28 1E-32 202.2 26.2 245 4-265 59-344 (345)
104 cd08252 AL_MDR Arginate lyase 100.0 5.3E-28 1.1E-32 201.2 26.4 249 4-265 65-336 (336)
105 TIGR02824 quinone_pig3 putativ 100.0 8.3E-28 1.8E-32 198.8 26.7 254 4-266 63-325 (325)
106 cd05281 TDH Threonine dehydrog 100.0 7.1E-28 1.5E-32 200.8 25.3 244 4-266 63-341 (341)
107 cd08264 Zn_ADH_like2 Alcohol d 100.0 8.2E-28 1.8E-32 199.2 24.0 235 4-262 60-324 (325)
108 cd08247 AST1_like AST1 is a cy 100.0 1.4E-27 3E-32 199.9 24.7 257 4-266 64-352 (352)
109 PLN02702 L-idonate 5-dehydroge 100.0 3.8E-27 8.2E-32 198.1 26.9 243 4-265 79-363 (364)
110 cd08272 MDR6 Medium chain dehy 100.0 4.1E-27 8.8E-32 194.9 26.3 248 4-266 63-326 (326)
111 cd08234 threonine_DH_like L-th 100.0 4E-27 8.6E-32 195.8 26.1 242 4-264 58-333 (334)
112 KOG1202 Animal-type fatty acid 100.0 1.1E-28 2.4E-33 217.6 16.3 238 20-266 1492-1741(2376)
113 cd08273 MDR8 Medium chain dehy 100.0 2.8E-27 6E-32 196.5 23.9 251 4-264 63-330 (331)
114 cd08255 2-desacetyl-2-hydroxye 100.0 2.6E-27 5.7E-32 191.9 23.2 240 4-263 26-276 (277)
115 cd08288 MDR_yhdh Yhdh putative 100.0 8.7E-27 1.9E-31 193.0 26.8 249 4-266 63-324 (324)
116 cd08241 QOR1 Quinone oxidoredu 100.0 6.2E-27 1.3E-31 193.4 25.6 253 4-265 63-323 (323)
117 cd08271 MDR5 Medium chain dehy 100.0 2.3E-26 5E-31 190.4 27.0 249 4-266 62-325 (325)
118 cd08248 RTN4I1 Human Reticulon 100.0 6E-27 1.3E-31 195.9 23.6 254 5-265 80-350 (350)
119 cd08245 CAD Cinnamyl alcohol d 100.0 1.2E-26 2.6E-31 192.6 25.2 240 4-264 59-330 (330)
120 cd08298 CAD2 Cinnamyl alcohol 100.0 1.4E-26 3.1E-31 192.1 25.4 234 4-264 64-329 (329)
121 cd08242 MDR_like Medium chain 100.0 8.2E-27 1.8E-31 192.7 23.5 230 3-266 55-319 (319)
122 cd08275 MDR3 Medium chain dehy 100.0 2.4E-26 5.3E-31 191.2 26.5 258 4-266 62-337 (337)
123 cd08267 MDR1 Medium chain dehy 100.0 5E-26 1.1E-30 187.9 24.3 247 4-264 64-319 (319)
124 cd08258 Zn_ADH4 Alcohol dehydr 100.0 5.8E-26 1.3E-30 186.4 24.1 211 4-231 61-306 (306)
125 cd05289 MDR_like_2 alcohol deh 99.9 1.2E-25 2.6E-30 184.6 24.4 238 4-264 65-309 (309)
126 cd05188 MDR Medium chain reduc 99.9 7.3E-25 1.6E-29 176.7 23.4 208 4-227 35-270 (271)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 2.4E-18 5.1E-23 123.4 14.4 127 91-229 1-129 (130)
128 PF13602 ADH_zinc_N_2: Zinc-bi 99.7 3.7E-16 7.9E-21 111.5 8.0 122 124-264 1-127 (127)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.7E-12 3.8E-17 108.7 14.5 175 66-266 187-376 (413)
130 PRK09424 pntA NAD(P) transhydr 99.3 4.7E-11 1E-15 102.7 15.2 149 77-235 162-334 (509)
131 PF11017 DUF2855: Protein of u 98.8 5.5E-07 1.2E-11 72.5 15.3 165 4-182 33-234 (314)
132 PRK11873 arsM arsenite S-adeno 98.6 8.1E-07 1.8E-11 71.8 11.2 168 75-264 73-259 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.5 1E-06 2.3E-11 76.0 11.1 104 78-183 162-288 (511)
134 COG4221 Short-chain alcohol de 98.5 1.5E-06 3.2E-11 67.0 9.4 81 79-159 5-91 (246)
135 PF08240 ADH_N: Alcohol dehydr 98.5 1.9E-07 4.1E-12 64.5 4.0 43 4-46 37-109 (109)
136 PRK05476 S-adenosyl-L-homocyst 98.4 5.6E-06 1.2E-10 70.2 11.7 104 65-182 196-302 (425)
137 TIGR00936 ahcY adenosylhomocys 98.3 1.4E-05 3E-10 67.4 12.1 102 66-181 180-284 (406)
138 TIGR00518 alaDH alanine dehydr 98.3 3E-05 6.6E-10 65.2 13.5 98 80-183 167-271 (370)
139 PLN02494 adenosylhomocysteinas 98.3 1.6E-05 3.5E-10 67.7 11.6 101 67-181 240-343 (477)
140 PRK08306 dipicolinate synthase 98.2 3.5E-05 7.5E-10 62.9 12.3 92 79-181 151-243 (296)
141 PRK00517 prmA ribosomal protei 98.1 4.1E-05 8.8E-10 61.0 11.3 143 16-180 63-214 (250)
142 COG0300 DltE Short-chain dehyd 98.1 2.4E-05 5.1E-10 62.0 9.7 82 77-159 3-94 (265)
143 PRK08324 short chain dehydroge 98.1 4E-05 8.7E-10 70.0 12.3 106 78-183 420-561 (681)
144 PRK05786 fabG 3-ketoacyl-(acyl 98.1 4.7E-05 1E-09 60.1 11.0 104 79-182 4-138 (238)
145 COG3967 DltE Short-chain dehyd 98.1 2.8E-05 6E-10 58.3 8.7 79 80-159 5-88 (245)
146 PRK05693 short chain dehydroge 98.1 0.00011 2.4E-09 59.4 12.6 77 81-158 2-81 (274)
147 PRK12742 oxidoreductase; Provi 98.1 0.00012 2.6E-09 57.7 12.6 102 79-182 5-134 (237)
148 PRK06182 short chain dehydroge 98.0 0.00012 2.6E-09 59.2 12.3 80 79-159 2-84 (273)
149 PF01488 Shikimate_DH: Shikima 98.0 9.2E-05 2E-09 53.1 9.8 93 79-180 11-110 (135)
150 cd05213 NAD_bind_Glutamyl_tRNA 98.0 6.8E-05 1.5E-09 61.7 10.1 107 43-162 141-251 (311)
151 PRK08265 short chain dehydroge 98.0 0.00018 3.9E-09 57.8 12.2 80 79-158 5-89 (261)
152 PRK05993 short chain dehydroge 97.9 0.00015 3.2E-09 58.8 11.1 79 79-158 3-85 (277)
153 PTZ00075 Adenosylhomocysteinas 97.9 0.00027 5.8E-09 60.6 12.5 91 77-181 251-343 (476)
154 KOG1205 Predicted dehydrogenas 97.9 0.0002 4.3E-09 57.3 10.9 106 79-184 11-154 (282)
155 PRK08339 short chain dehydroge 97.9 0.00044 9.5E-09 55.6 12.7 81 79-159 7-95 (263)
156 PRK05872 short chain dehydroge 97.8 0.00016 3.4E-09 59.3 9.8 81 79-159 8-95 (296)
157 PRK06198 short chain dehydroge 97.8 0.0022 4.8E-08 51.3 16.1 81 79-159 5-94 (260)
158 PRK07109 short chain dehydroge 97.8 0.00033 7.2E-09 58.4 11.4 105 79-183 7-147 (334)
159 PRK06057 short chain dehydroge 97.8 0.00024 5.3E-09 56.7 10.2 81 79-159 6-89 (255)
160 PRK06200 2,3-dihydroxy-2,3-dih 97.8 0.00026 5.6E-09 56.8 9.7 80 79-158 5-89 (263)
161 TIGR03325 BphB_TodD cis-2,3-di 97.7 0.0003 6.5E-09 56.5 9.8 80 79-158 4-88 (262)
162 PRK07060 short chain dehydroge 97.7 0.00048 1E-08 54.6 10.8 79 79-159 8-87 (245)
163 PRK06484 short chain dehydroge 97.7 0.00055 1.2E-08 60.7 12.2 105 79-183 268-404 (520)
164 PF12847 Methyltransf_18: Meth 97.7 0.00016 3.4E-09 49.9 7.0 95 79-178 1-110 (112)
165 PRK08261 fabG 3-ketoacyl-(acyl 97.7 0.00077 1.7E-08 58.7 12.9 80 79-158 209-293 (450)
166 PLN03209 translocon at the inn 97.7 0.00082 1.8E-08 59.2 12.7 104 74-182 74-210 (576)
167 TIGR02853 spore_dpaA dipicolin 97.7 0.0044 9.6E-08 50.4 16.1 91 79-180 150-241 (287)
168 PRK07825 short chain dehydroge 97.7 0.00035 7.6E-09 56.4 9.8 80 80-159 5-88 (273)
169 PRK12829 short chain dehydroge 97.7 0.00036 7.9E-09 55.9 9.8 84 76-159 7-96 (264)
170 PF13460 NAD_binding_10: NADH( 97.7 0.001 2.2E-08 50.2 11.6 93 83-182 1-100 (183)
171 PRK06139 short chain dehydroge 97.7 0.00041 8.9E-09 57.7 10.1 80 79-158 6-93 (330)
172 PRK12939 short chain dehydroge 97.7 0.00084 1.8E-08 53.3 11.3 81 79-159 6-94 (250)
173 PLN02780 ketoreductase/ oxidor 97.7 0.00038 8.1E-09 57.7 9.4 79 79-158 52-141 (320)
174 PRK07576 short chain dehydroge 97.7 0.00032 6.9E-09 56.4 8.7 80 79-158 8-95 (264)
175 PRK06196 oxidoreductase; Provi 97.7 0.00054 1.2E-08 56.6 10.3 80 79-158 25-108 (315)
176 KOG1210 Predicted 3-ketosphing 97.6 0.0024 5.1E-08 51.4 13.0 83 76-159 29-122 (331)
177 PRK07806 short chain dehydroge 97.6 0.0012 2.6E-08 52.4 11.8 102 79-180 5-135 (248)
178 PRK08017 oxidoreductase; Provi 97.6 0.00048 1E-08 55.0 9.5 77 81-158 3-83 (256)
179 PRK06949 short chain dehydroge 97.6 0.00044 9.4E-09 55.3 9.1 80 79-158 8-95 (258)
180 PRK00045 hemA glutamyl-tRNA re 97.6 0.00025 5.3E-09 61.0 8.0 89 61-159 160-252 (423)
181 PRK07062 short chain dehydroge 97.6 0.00048 1E-08 55.4 9.3 81 79-159 7-97 (265)
182 PRK07063 short chain dehydroge 97.6 0.00041 9E-09 55.5 8.9 80 79-158 6-95 (260)
183 PRK08177 short chain dehydroge 97.6 0.00054 1.2E-08 53.6 9.2 78 81-159 2-81 (225)
184 PRK05866 short chain dehydroge 97.6 0.00041 9E-09 56.7 8.9 81 79-159 39-127 (293)
185 PRK05867 short chain dehydroge 97.6 0.00045 9.7E-09 55.1 8.8 80 79-158 8-95 (253)
186 PRK12771 putative glutamate sy 97.6 9.5E-05 2.1E-09 66.1 5.3 77 76-159 133-232 (564)
187 PRK06500 short chain dehydroge 97.6 0.0007 1.5E-08 53.7 9.8 80 79-159 5-90 (249)
188 PRK07890 short chain dehydroge 97.6 0.00049 1.1E-08 55.0 8.9 81 79-159 4-92 (258)
189 PRK07231 fabG 3-ketoacyl-(acyl 97.6 0.0006 1.3E-08 54.2 9.1 81 79-159 4-91 (251)
190 PRK05854 short chain dehydroge 97.6 0.0009 2E-08 55.3 10.3 81 79-159 13-103 (313)
191 PF02826 2-Hacid_dh_C: D-isome 97.6 0.0026 5.7E-08 47.9 11.9 90 77-180 33-128 (178)
192 PRK07831 short chain dehydroge 97.5 0.00091 2E-08 53.6 9.9 83 77-159 14-107 (262)
193 PRK07478 short chain dehydroge 97.5 0.00062 1.3E-08 54.3 8.9 81 79-159 5-93 (254)
194 PRK06841 short chain dehydroge 97.5 0.00079 1.7E-08 53.7 9.5 80 79-159 14-99 (255)
195 PRK07326 short chain dehydroge 97.5 0.00063 1.4E-08 53.6 8.8 81 79-159 5-92 (237)
196 TIGR00406 prmA ribosomal prote 97.5 0.00087 1.9E-08 54.6 9.7 145 20-180 106-260 (288)
197 PRK06180 short chain dehydroge 97.5 0.00088 1.9E-08 54.3 9.8 81 79-159 3-88 (277)
198 PRK07832 short chain dehydroge 97.5 0.002 4.4E-08 52.0 11.8 78 82-159 2-88 (272)
199 PRK05717 oxidoreductase; Valid 97.5 0.001 2.2E-08 53.2 9.7 81 79-159 9-94 (255)
200 PRK05884 short chain dehydroge 97.5 0.0012 2.6E-08 51.7 9.9 76 82-158 2-78 (223)
201 PRK06101 short chain dehydroge 97.5 0.0042 9E-08 49.1 13.1 76 81-158 2-80 (240)
202 PRK07523 gluconate 5-dehydroge 97.5 0.00088 1.9E-08 53.5 9.3 81 79-159 9-97 (255)
203 PRK07814 short chain dehydroge 97.5 0.00084 1.8E-08 53.9 9.2 80 79-158 9-96 (263)
204 PRK07024 short chain dehydroge 97.5 0.0013 2.8E-08 52.6 10.2 79 80-158 2-87 (257)
205 PRK07453 protochlorophyllide o 97.5 0.0011 2.4E-08 55.0 10.0 80 79-158 5-92 (322)
206 PRK08703 short chain dehydroge 97.5 0.0015 3.3E-08 51.6 10.2 81 79-159 5-97 (239)
207 PRK12828 short chain dehydroge 97.5 0.00093 2E-08 52.6 9.0 81 79-159 6-92 (239)
208 PRK00377 cbiT cobalt-precorrin 97.5 0.0064 1.4E-07 46.6 13.3 99 74-177 35-143 (198)
209 PRK05876 short chain dehydroge 97.5 0.0009 1.9E-08 54.2 8.9 80 79-158 5-92 (275)
210 PRK08267 short chain dehydroge 97.5 0.0012 2.5E-08 52.9 9.5 79 81-159 2-87 (260)
211 PRK06194 hypothetical protein; 97.5 0.00098 2.1E-08 54.2 9.1 80 80-159 6-93 (287)
212 PRK06953 short chain dehydroge 97.5 0.0017 3.7E-08 50.7 10.2 78 81-159 2-80 (222)
213 PRK09186 flagellin modificatio 97.4 0.0011 2.5E-08 52.8 9.2 80 79-158 3-92 (256)
214 TIGR01832 kduD 2-deoxy-D-gluco 97.4 0.0013 2.8E-08 52.2 9.5 80 79-159 4-90 (248)
215 PRK07904 short chain dehydroge 97.4 0.0014 3E-08 52.4 9.6 84 76-159 4-97 (253)
216 PRK10538 malonic semialdehyde 97.4 0.0015 3.2E-08 51.9 9.8 78 82-159 2-84 (248)
217 PRK06484 short chain dehydroge 97.4 0.0012 2.5E-08 58.6 9.9 81 79-159 4-89 (520)
218 PRK11705 cyclopropane fatty ac 97.4 0.0021 4.6E-08 54.4 10.9 107 64-179 152-267 (383)
219 PRK07677 short chain dehydroge 97.4 0.001 2.3E-08 53.0 8.8 79 80-158 1-87 (252)
220 PRK06482 short chain dehydroge 97.4 0.0015 3.3E-08 52.8 9.8 79 81-159 3-86 (276)
221 PLN02253 xanthoxin dehydrogena 97.4 0.0015 3.3E-08 52.9 9.8 81 79-159 17-104 (280)
222 PRK07067 sorbitol dehydrogenas 97.4 0.0016 3.4E-08 52.1 9.7 80 79-158 5-89 (257)
223 PRK08340 glucose-1-dehydrogena 97.4 0.0013 2.9E-08 52.6 9.2 78 82-159 2-86 (259)
224 PRK06197 short chain dehydroge 97.4 0.0011 2.5E-08 54.4 8.9 80 79-158 15-104 (306)
225 PF02719 Polysacc_synt_2: Poly 97.4 0.033 7.1E-07 45.1 16.7 168 83-254 1-214 (293)
226 PRK08213 gluconate 5-dehydroge 97.4 0.0015 3.1E-08 52.4 9.3 81 79-159 11-99 (259)
227 PRK07454 short chain dehydroge 97.4 0.0016 3.4E-08 51.6 9.3 82 78-159 4-93 (241)
228 PRK09291 short chain dehydroge 97.4 0.0017 3.7E-08 51.8 9.6 75 80-158 2-82 (257)
229 PRK09072 short chain dehydroge 97.4 0.0018 3.9E-08 51.9 9.7 81 79-159 4-90 (263)
230 PF13561 adh_short_C2: Enoyl-( 97.4 0.0086 1.9E-07 47.4 13.4 174 87-263 1-234 (241)
231 PRK08217 fabG 3-ketoacyl-(acyl 97.4 0.0014 3.1E-08 52.1 9.0 80 79-158 4-91 (253)
232 PRK06128 oxidoreductase; Provi 97.4 0.0037 8E-08 51.3 11.6 104 79-183 54-195 (300)
233 PRK08589 short chain dehydroge 97.4 0.0014 3E-08 52.9 9.0 80 79-159 5-92 (272)
234 PRK06483 dihydromonapterin red 97.4 0.0017 3.8E-08 51.1 9.3 79 80-159 2-84 (236)
235 COG1748 LYS9 Saccharopine dehy 97.4 0.0027 5.9E-08 53.3 10.7 93 81-180 2-100 (389)
236 PRK08643 acetoin reductase; Va 97.4 0.0012 2.7E-08 52.6 8.6 80 80-159 2-89 (256)
237 PRK08085 gluconate 5-dehydroge 97.4 0.0015 3.3E-08 52.1 9.0 81 79-159 8-96 (254)
238 KOG1610 Corticosteroid 11-beta 97.4 0.0096 2.1E-07 48.0 13.2 108 77-184 26-169 (322)
239 PRK09242 tropinone reductase; 97.4 0.0015 3.3E-08 52.2 9.1 81 79-159 8-98 (257)
240 PRK08415 enoyl-(acyl carrier p 97.4 0.0018 3.9E-08 52.4 9.5 105 79-183 4-147 (274)
241 PRK08251 short chain dehydroge 97.4 0.0017 3.6E-08 51.6 9.2 79 80-158 2-90 (248)
242 PRK07774 short chain dehydroge 97.4 0.0015 3.1E-08 52.0 8.8 80 79-158 5-92 (250)
243 PRK06914 short chain dehydroge 97.4 0.0015 3.2E-08 52.9 9.0 79 80-159 3-91 (280)
244 KOG0725 Reductases with broad 97.3 0.0015 3.3E-08 52.6 8.7 82 78-159 6-99 (270)
245 PRK06125 short chain dehydroge 97.3 0.0023 5E-08 51.2 9.9 79 79-159 6-91 (259)
246 PRK08263 short chain dehydroge 97.3 0.0024 5.2E-08 51.7 10.0 80 80-159 3-87 (275)
247 PRK07035 short chain dehydroge 97.3 0.0017 3.7E-08 51.7 9.0 80 79-158 7-94 (252)
248 PRK08862 short chain dehydroge 97.3 0.0017 3.7E-08 51.0 8.7 80 79-158 4-92 (227)
249 PRK06138 short chain dehydroge 97.3 0.0015 3.3E-08 51.9 8.5 81 79-159 4-91 (252)
250 PF02353 CMAS: Mycolic acid cy 97.3 0.00088 1.9E-08 53.9 7.0 101 70-178 53-165 (273)
251 PRK06505 enoyl-(acyl carrier p 97.3 0.0024 5.2E-08 51.6 9.6 80 79-158 6-94 (271)
252 PRK06179 short chain dehydroge 97.3 0.0013 2.8E-08 53.0 8.0 78 79-159 3-83 (270)
253 PRK05875 short chain dehydroge 97.3 0.0025 5.3E-08 51.6 9.7 80 79-158 6-95 (276)
254 PRK06720 hypothetical protein; 97.3 0.0025 5.3E-08 47.6 8.9 81 79-159 15-103 (169)
255 PF00670 AdoHcyase_NAD: S-aden 97.3 0.015 3.2E-07 42.6 12.4 100 67-180 9-111 (162)
256 PRK06181 short chain dehydroge 97.3 0.0022 4.8E-08 51.4 9.2 79 81-159 2-88 (263)
257 PRK06172 short chain dehydroge 97.3 0.0019 4.2E-08 51.4 8.8 81 79-159 6-94 (253)
258 PRK07074 short chain dehydroge 97.3 0.003 6.5E-08 50.4 9.9 80 80-159 2-87 (257)
259 PRK05653 fabG 3-ketoacyl-(acyl 97.3 0.0029 6.3E-08 50.0 9.7 81 79-159 4-92 (246)
260 cd01078 NAD_bind_H4MPT_DH NADP 97.3 0.0083 1.8E-07 45.9 11.8 77 79-160 27-108 (194)
261 PRK07666 fabG 3-ketoacyl-(acyl 97.3 0.0021 4.6E-08 50.7 8.8 81 79-159 6-94 (239)
262 PF02670 DXP_reductoisom: 1-de 97.3 0.011 2.3E-07 41.7 11.1 93 83-178 1-120 (129)
263 PRK13394 3-hydroxybutyrate deh 97.3 0.0023 4.9E-08 51.2 9.0 81 79-159 6-94 (262)
264 PRK07985 oxidoreductase; Provi 97.3 0.0045 9.8E-08 50.6 10.8 105 79-183 48-189 (294)
265 PRK12367 short chain dehydroge 97.3 0.0031 6.6E-08 50.2 9.5 74 79-159 13-89 (245)
266 PRK06079 enoyl-(acyl carrier p 97.3 0.0023 4.9E-08 51.1 8.8 79 79-158 6-92 (252)
267 PRK12481 2-deoxy-D-gluconate 3 97.2 0.003 6.5E-08 50.4 9.5 80 79-159 7-93 (251)
268 PRK12429 3-hydroxybutyrate deh 97.2 0.0033 7.1E-08 50.1 9.7 80 79-158 3-90 (258)
269 PRK12936 3-ketoacyl-(acyl-carr 97.2 0.0035 7.7E-08 49.5 9.8 81 79-159 5-90 (245)
270 PRK12747 short chain dehydroge 97.2 0.0059 1.3E-07 48.6 11.1 105 79-183 3-148 (252)
271 PRK08261 fabG 3-ketoacyl-(acyl 97.2 0.00055 1.2E-08 59.6 5.5 94 74-182 28-126 (450)
272 PRK08277 D-mannonate oxidoredu 97.2 0.0025 5.5E-08 51.6 9.0 80 79-158 9-96 (278)
273 PRK12823 benD 1,6-dihydroxycyc 97.2 0.0029 6.3E-08 50.6 9.2 79 79-158 7-93 (260)
274 PRK08628 short chain dehydroge 97.2 0.0019 4.1E-08 51.6 8.1 80 79-158 6-92 (258)
275 COG0686 Ald Alanine dehydrogen 97.2 0.0035 7.5E-08 50.4 9.1 97 77-181 166-270 (371)
276 PRK06701 short chain dehydroge 97.2 0.0064 1.4E-07 49.7 11.2 105 79-183 45-185 (290)
277 PRK12746 short chain dehydroge 97.2 0.011 2.4E-07 47.1 12.3 80 80-159 6-100 (254)
278 CHL00194 ycf39 Ycf39; Provisio 97.2 0.0052 1.1E-07 50.8 10.6 94 82-181 2-111 (317)
279 PRK12937 short chain dehydroge 97.2 0.0092 2E-07 47.2 11.7 80 79-158 4-92 (245)
280 PRK08159 enoyl-(acyl carrier p 97.2 0.0033 7.2E-08 50.8 9.2 82 77-158 7-97 (272)
281 PRK07533 enoyl-(acyl carrier p 97.2 0.0042 9.2E-08 49.7 9.7 80 79-158 9-97 (258)
282 PRK06935 2-deoxy-D-gluconate 3 97.2 0.0024 5.2E-08 51.1 8.3 80 79-159 14-101 (258)
283 PRK06124 gluconate 5-dehydroge 97.2 0.0033 7.2E-08 50.1 9.1 81 79-159 10-98 (256)
284 PRK06114 short chain dehydroge 97.2 0.0035 7.6E-08 50.0 9.2 81 79-159 7-96 (254)
285 PRK13940 glutamyl-tRNA reducta 97.2 0.0049 1.1E-07 52.7 10.4 74 78-160 179-253 (414)
286 PRK06603 enoyl-(acyl carrier p 97.2 0.0042 9.1E-08 49.8 9.6 80 79-158 7-95 (260)
287 PRK07097 gluconate 5-dehydroge 97.2 0.0048 1E-07 49.6 10.0 81 79-159 9-97 (265)
288 TIGR01289 LPOR light-dependent 97.2 0.0034 7.5E-08 51.9 9.3 79 80-158 3-90 (314)
289 KOG1014 17 beta-hydroxysteroid 97.2 0.0034 7.4E-08 50.4 8.7 82 78-159 47-136 (312)
290 PRK12826 3-ketoacyl-(acyl-carr 97.2 0.0032 7E-08 49.9 8.8 81 79-159 5-93 (251)
291 PRK07791 short chain dehydroge 97.2 0.0032 7E-08 51.3 8.9 82 78-159 4-102 (286)
292 PRK07856 short chain dehydroge 97.1 0.0033 7.2E-08 50.0 8.7 75 79-158 5-84 (252)
293 KOG1201 Hydroxysteroid 17-beta 97.1 0.003 6.5E-08 50.5 8.0 79 79-159 37-124 (300)
294 COG4122 Predicted O-methyltran 97.1 0.012 2.7E-07 45.4 11.2 105 73-180 53-167 (219)
295 COG2227 UbiG 2-polyprenyl-3-me 97.1 0.0047 1E-07 47.9 8.8 94 78-178 58-160 (243)
296 PRK06113 7-alpha-hydroxysteroi 97.1 0.0034 7.4E-08 50.1 8.6 81 79-159 10-98 (255)
297 COG2264 PrmA Ribosomal protein 97.1 0.0078 1.7E-07 48.7 10.4 152 18-182 107-266 (300)
298 COG2518 Pcm Protein-L-isoaspar 97.1 0.0057 1.2E-07 46.6 9.0 112 59-180 54-170 (209)
299 PRK07889 enoyl-(acyl carrier p 97.1 0.0048 1E-07 49.4 9.3 81 79-159 6-95 (256)
300 PRK05447 1-deoxy-D-xylulose 5- 97.1 0.013 2.7E-07 49.2 11.8 96 81-178 2-121 (385)
301 PRK06463 fabG 3-ketoacyl-(acyl 97.1 0.0052 1.1E-07 49.0 9.4 80 79-159 6-89 (255)
302 KOG1209 1-Acyl dihydroxyaceton 97.1 0.013 2.9E-07 44.5 10.7 106 79-184 6-143 (289)
303 PLN00141 Tic62-NAD(P)-related 97.1 0.0045 9.7E-08 49.4 9.0 98 80-181 17-133 (251)
304 PRK07424 bifunctional sterol d 97.1 0.0055 1.2E-07 52.3 9.8 75 79-158 177-254 (406)
305 PRK07984 enoyl-(acyl carrier p 97.1 0.0065 1.4E-07 48.8 9.9 80 79-158 5-93 (262)
306 PRK08226 short chain dehydroge 97.1 0.0053 1.1E-07 49.2 9.4 80 79-158 5-91 (263)
307 TIGR01035 hemA glutamyl-tRNA r 97.1 0.0088 1.9E-07 51.4 11.1 74 76-159 176-250 (417)
308 PRK06077 fabG 3-ketoacyl-(acyl 97.1 0.018 3.9E-07 45.7 12.4 103 80-183 6-144 (252)
309 COG2230 Cfa Cyclopropane fatty 97.1 0.0055 1.2E-07 49.1 9.1 103 65-180 58-177 (283)
310 PRK07577 short chain dehydroge 97.1 0.0031 6.7E-08 49.6 7.8 76 79-159 2-78 (234)
311 PRK08416 7-alpha-hydroxysteroi 97.1 0.0042 9E-08 49.8 8.6 80 79-158 7-96 (260)
312 COG2242 CobL Precorrin-6B meth 97.1 0.018 3.8E-07 43.1 11.0 98 76-179 31-135 (187)
313 PRK08993 2-deoxy-D-gluconate 3 97.1 0.0056 1.2E-07 48.8 9.2 80 79-159 9-95 (253)
314 PRK12384 sorbitol-6-phosphate 97.0 0.0042 9E-08 49.7 8.5 79 80-158 2-90 (259)
315 PRK08690 enoyl-(acyl carrier p 97.0 0.0043 9.4E-08 49.8 8.6 81 79-159 5-94 (261)
316 TIGR03206 benzo_BadH 2-hydroxy 97.0 0.005 1.1E-07 48.9 8.8 80 79-158 2-89 (250)
317 PRK13943 protein-L-isoaspartat 97.0 0.013 2.7E-07 48.5 11.1 100 73-178 74-179 (322)
318 PRK06940 short chain dehydroge 97.0 0.018 3.8E-07 46.6 12.0 101 80-182 2-128 (275)
319 PRK06398 aldose dehydrogenase; 97.0 0.0017 3.6E-08 52.1 5.9 75 79-158 5-81 (258)
320 PRK04148 hypothetical protein; 97.0 0.0096 2.1E-07 42.2 8.8 85 78-171 15-100 (134)
321 PRK07775 short chain dehydroge 97.0 0.0085 1.8E-07 48.4 10.0 80 80-159 10-97 (274)
322 PRK08945 putative oxoacyl-(acy 97.0 0.0064 1.4E-07 48.2 9.0 44 77-120 9-52 (247)
323 TIGR01963 PHB_DH 3-hydroxybuty 97.0 0.0051 1.1E-07 48.9 8.3 78 81-158 2-87 (255)
324 PRK06523 short chain dehydroge 97.0 0.0027 5.9E-08 50.8 6.8 76 79-158 8-86 (260)
325 PF00106 adh_short: short chai 97.0 0.0038 8.3E-08 46.2 7.1 79 81-159 1-90 (167)
326 PRK08303 short chain dehydroge 97.0 0.0081 1.8E-07 49.4 9.6 35 79-113 7-41 (305)
327 PRK12743 oxidoreductase; Provi 97.0 0.0075 1.6E-07 48.2 9.2 80 80-159 2-90 (256)
328 PRK05650 short chain dehydroge 96.9 0.0066 1.4E-07 48.9 8.9 78 82-159 2-87 (270)
329 PRK06997 enoyl-(acyl carrier p 96.9 0.0061 1.3E-07 48.9 8.5 80 79-158 5-93 (260)
330 PRK09135 pteridine reductase; 96.9 0.0078 1.7E-07 47.6 9.0 80 79-158 5-94 (249)
331 PLN02730 enoyl-[acyl-carrier-p 96.9 0.023 5E-07 46.6 11.8 36 79-115 8-45 (303)
332 PRK07370 enoyl-(acyl carrier p 96.9 0.0074 1.6E-07 48.3 8.7 105 79-183 5-151 (258)
333 PRK00258 aroE shikimate 5-dehy 96.9 0.01 2.2E-07 48.1 9.6 94 78-179 121-221 (278)
334 COG2226 UbiE Methylase involve 96.9 0.0099 2.1E-07 46.6 9.0 99 75-181 47-158 (238)
335 PRK08278 short chain dehydroge 96.9 0.0088 1.9E-07 48.3 9.1 80 79-159 5-100 (273)
336 PF03435 Saccharop_dh: Sacchar 96.9 0.015 3.3E-07 49.6 10.9 91 83-179 1-98 (386)
337 PRK08594 enoyl-(acyl carrier p 96.9 0.01 2.3E-07 47.5 9.4 80 79-158 6-96 (257)
338 PRK13942 protein-L-isoaspartat 96.9 0.021 4.6E-07 44.3 10.8 98 73-178 70-175 (212)
339 PRK08642 fabG 3-ketoacyl-(acyl 96.9 0.019 4.1E-07 45.6 10.9 79 80-158 5-90 (253)
340 PRK05565 fabG 3-ketoacyl-(acyl 96.9 0.0072 1.6E-07 47.8 8.4 80 80-159 5-93 (247)
341 TIGR01829 AcAcCoA_reduct aceto 96.9 0.0079 1.7E-07 47.4 8.6 78 81-158 1-87 (242)
342 PRK08264 short chain dehydroge 96.9 0.0066 1.4E-07 47.8 8.0 75 79-159 5-83 (238)
343 PRK05599 hypothetical protein; 96.9 0.0074 1.6E-07 48.0 8.3 77 82-159 2-87 (246)
344 PRK07102 short chain dehydroge 96.8 0.0085 1.8E-07 47.4 8.6 78 81-159 2-86 (243)
345 TIGR02632 RhaD_aldol-ADH rhamn 96.8 0.0068 1.5E-07 55.5 8.9 81 79-159 413-503 (676)
346 PRK05557 fabG 3-ketoacyl-(acyl 96.8 0.012 2.6E-07 46.5 9.5 81 79-159 4-93 (248)
347 KOG1200 Mitochondrial/plastidi 96.8 0.013 2.9E-07 43.9 8.7 80 80-159 14-100 (256)
348 PRK08936 glucose-1-dehydrogena 96.8 0.01 2.2E-07 47.5 9.1 81 79-159 6-95 (261)
349 PRK08063 enoyl-(acyl carrier p 96.8 0.0079 1.7E-07 47.7 8.4 81 79-159 3-92 (250)
350 PRK06171 sorbitol-6-phosphate 96.8 0.003 6.4E-08 50.8 5.9 76 79-158 8-86 (266)
351 PRK07069 short chain dehydroge 96.8 0.0091 2E-07 47.4 8.6 77 83-159 2-89 (251)
352 TIGR00438 rrmJ cell division p 96.8 0.024 5.2E-07 43.0 10.5 99 74-180 27-147 (188)
353 TIGR02415 23BDH acetoin reduct 96.8 0.0091 2E-07 47.5 8.5 79 81-159 1-87 (254)
354 PRK00811 spermidine synthase; 96.8 0.017 3.7E-07 47.0 10.0 97 78-178 75-190 (283)
355 PLN02366 spermidine synthase 96.8 0.018 3.9E-07 47.2 10.1 98 78-178 90-205 (308)
356 PLN02476 O-methyltransferase 96.8 0.023 5E-07 45.7 10.5 104 73-179 112-228 (278)
357 PLN00015 protochlorophyllide r 96.8 0.011 2.3E-07 48.8 8.9 75 84-158 1-84 (308)
358 PRK05855 short chain dehydroge 96.8 0.0078 1.7E-07 54.0 8.8 81 79-159 314-402 (582)
359 KOG1208 Dehydrogenases with di 96.8 0.011 2.4E-07 48.6 8.8 105 78-182 33-173 (314)
360 COG1086 Predicted nucleoside-d 96.8 0.089 1.9E-06 46.1 14.4 173 79-255 249-463 (588)
361 PRK08219 short chain dehydroge 96.8 0.011 2.3E-07 46.2 8.6 76 81-159 4-81 (227)
362 PRK12938 acetyacetyl-CoA reduc 96.8 0.0089 1.9E-07 47.3 8.1 81 79-159 2-91 (246)
363 PF05368 NmrA: NmrA-like famil 96.7 0.014 3.1E-07 45.9 9.1 70 83-158 1-73 (233)
364 PRK07201 short chain dehydroge 96.7 0.014 3E-07 53.5 10.1 79 80-158 371-457 (657)
365 PRK09134 short chain dehydroge 96.7 0.019 4.2E-07 45.8 9.8 81 79-159 8-97 (258)
366 PF01596 Methyltransf_3: O-met 96.7 0.0071 1.5E-07 46.5 6.8 105 73-180 39-156 (205)
367 COG2910 Putative NADH-flavin r 96.7 0.012 2.7E-07 43.6 7.6 93 82-183 2-108 (211)
368 TIGR00507 aroE shikimate 5-deh 96.7 0.073 1.6E-06 43.0 13.0 95 77-180 114-215 (270)
369 TIGR02622 CDP_4_6_dhtase CDP-g 96.7 0.0096 2.1E-07 50.0 8.1 77 79-158 3-84 (349)
370 PRK00536 speE spermidine synth 96.7 0.0075 1.6E-07 48.1 6.9 98 78-179 71-171 (262)
371 cd01080 NAD_bind_m-THF_DH_Cycl 96.7 0.037 7.9E-07 41.2 10.1 93 60-180 24-117 (168)
372 cd01065 NAD_bind_Shikimate_DH 96.6 0.038 8.3E-07 40.4 10.2 94 78-180 17-117 (155)
373 PRK14175 bifunctional 5,10-met 96.6 0.036 7.8E-07 44.8 10.5 93 60-180 138-231 (286)
374 PLN02657 3,8-divinyl protochlo 96.6 0.01 2.2E-07 50.6 8.0 82 77-159 57-146 (390)
375 PRK12549 shikimate 5-dehydroge 96.6 0.035 7.6E-07 45.1 10.7 71 79-158 126-201 (284)
376 PF03807 F420_oxidored: NADP o 96.6 0.093 2E-06 34.8 11.2 86 82-178 1-93 (96)
377 PRK12745 3-ketoacyl-(acyl-carr 96.6 0.021 4.6E-07 45.4 9.3 79 81-159 3-90 (256)
378 PRK12550 shikimate 5-dehydroge 96.6 0.034 7.5E-07 44.8 10.2 68 77-158 119-187 (272)
379 PRK03369 murD UDP-N-acetylmura 96.6 0.023 5E-07 50.0 10.0 72 77-159 9-80 (488)
380 TIGR01809 Shik-DH-AROM shikima 96.6 0.013 2.9E-07 47.5 8.0 75 79-159 124-200 (282)
381 PRK14027 quinate/shikimate deh 96.6 0.044 9.4E-07 44.5 10.8 46 78-124 125-171 (283)
382 PLN02589 caffeoyl-CoA O-methyl 96.6 0.046 1E-06 43.3 10.7 105 71-178 71-189 (247)
383 PRK12935 acetoacetyl-CoA reduc 96.6 0.021 4.6E-07 45.2 9.1 81 79-159 5-94 (247)
384 KOG1199 Short-chain alcohol de 96.6 0.014 2.9E-07 42.9 7.0 81 78-159 7-93 (260)
385 TIGR02685 pter_reduc_Leis pter 96.6 0.022 4.8E-07 45.8 9.2 79 81-159 2-94 (267)
386 PRK13944 protein-L-isoaspartat 96.6 0.03 6.4E-07 43.2 9.5 98 73-178 66-172 (205)
387 PRK08220 2,3-dihydroxybenzoate 96.5 0.02 4.3E-07 45.5 8.8 75 79-159 7-86 (252)
388 PTZ00098 phosphoethanolamine N 96.5 0.03 6.5E-07 45.0 9.7 102 73-180 46-157 (263)
389 TIGR02469 CbiT precorrin-6Y C5 96.5 0.081 1.8E-06 36.8 10.9 97 75-178 15-121 (124)
390 TIGR03589 PseB UDP-N-acetylglu 96.5 0.03 6.6E-07 46.5 9.9 76 79-159 3-84 (324)
391 PRK00107 gidB 16S rRNA methylt 96.5 0.065 1.4E-06 40.6 10.8 97 76-179 42-145 (187)
392 PRK12825 fabG 3-ketoacyl-(acyl 96.5 0.025 5.5E-07 44.6 9.1 79 80-158 6-93 (249)
393 COG0169 AroE Shikimate 5-dehyd 96.5 0.033 7.2E-07 45.0 9.6 46 79-125 125-171 (283)
394 PRK01581 speE spermidine synth 96.5 0.071 1.5E-06 44.5 11.6 97 78-179 149-268 (374)
395 PF01135 PCMT: Protein-L-isoas 96.5 0.013 2.8E-07 45.2 7.0 99 73-178 66-171 (209)
396 PF01262 AlaDh_PNT_C: Alanine 96.5 0.028 6.1E-07 41.9 8.6 98 80-181 20-141 (168)
397 PRK08309 short chain dehydroge 96.5 0.24 5.2E-06 37.2 15.5 91 82-173 2-99 (177)
398 PRK12548 shikimate 5-dehydroge 96.5 0.038 8.3E-07 45.1 10.0 35 79-114 125-160 (289)
399 PRK09730 putative NAD(P)-bindi 96.4 0.026 5.7E-07 44.6 8.8 79 81-159 2-89 (247)
400 PRK07578 short chain dehydroge 96.4 0.051 1.1E-06 41.5 10.1 63 82-158 2-64 (199)
401 KOG1207 Diacetyl reductase/L-x 96.4 0.022 4.7E-07 42.0 7.3 47 79-126 6-52 (245)
402 PRK06123 short chain dehydroge 96.4 0.026 5.6E-07 44.7 8.7 80 80-159 2-90 (248)
403 TIGR00080 pimt protein-L-isoas 96.4 0.063 1.4E-06 41.7 10.6 98 73-178 71-176 (215)
404 PRK11207 tellurite resistance 96.4 0.017 3.7E-07 44.2 7.3 96 76-180 27-135 (197)
405 TIGR03840 TMPT_Se_Te thiopurin 96.4 0.018 3.9E-07 44.7 7.4 100 78-180 33-153 (213)
406 PRK07792 fabG 3-ketoacyl-(acyl 96.4 0.027 5.8E-07 46.4 8.8 81 79-159 11-99 (306)
407 COG0373 HemA Glutamyl-tRNA red 96.4 0.055 1.2E-06 46.0 10.5 93 78-180 176-275 (414)
408 PRK06947 glucose-1-dehydrogena 96.4 0.028 6.2E-07 44.5 8.6 78 81-158 3-89 (248)
409 PLN00016 RNA-binding protein; 96.3 0.038 8.2E-07 47.0 9.8 96 79-181 51-166 (378)
410 PRK12744 short chain dehydroge 96.3 0.027 5.9E-07 45.0 8.4 81 79-159 7-99 (257)
411 PRK07402 precorrin-6B methylas 96.3 0.23 4.9E-06 38.0 13.0 101 73-180 34-143 (196)
412 PLN03075 nicotianamine synthas 96.3 0.037 7.9E-07 44.9 8.7 97 79-179 123-233 (296)
413 TIGR01470 cysG_Nterm siroheme 96.3 0.042 9.1E-07 42.3 8.8 91 79-179 8-100 (205)
414 COG2519 GCD14 tRNA(1-methylade 96.3 0.031 6.8E-07 43.8 8.0 101 73-180 88-196 (256)
415 PRK07041 short chain dehydroge 96.3 0.024 5.2E-07 44.3 7.7 74 84-159 1-79 (230)
416 PRK04457 spermidine synthase; 96.3 0.12 2.5E-06 41.6 11.6 97 78-178 65-176 (262)
417 PLN02781 Probable caffeoyl-CoA 96.3 0.088 1.9E-06 41.5 10.7 106 71-179 60-178 (234)
418 COG0421 SpeE Spermidine syntha 96.3 0.072 1.6E-06 43.1 10.3 97 77-178 75-189 (282)
419 PRK06718 precorrin-2 dehydroge 96.2 0.02 4.4E-07 44.0 6.8 90 79-179 9-100 (202)
420 PRK12827 short chain dehydroge 96.2 0.036 7.8E-07 43.8 8.6 81 79-159 5-97 (249)
421 PRK07023 short chain dehydroge 96.2 0.042 9E-07 43.4 8.9 75 82-158 3-86 (243)
422 TIGR01500 sepiapter_red sepiap 96.2 0.043 9.3E-07 43.8 9.0 40 82-121 2-45 (256)
423 PLN02823 spermine synthase 96.2 0.088 1.9E-06 43.8 10.8 96 79-178 103-219 (336)
424 TIGR03649 ergot_EASG ergot alk 96.2 0.026 5.6E-07 45.9 7.8 95 82-180 1-105 (285)
425 PF13241 NAD_binding_7: Putati 96.2 0.0085 1.8E-07 40.7 4.1 86 79-180 6-92 (103)
426 PF02254 TrkA_N: TrkA-N domain 96.2 0.19 4E-06 34.7 11.1 91 83-178 1-95 (116)
427 PF01370 Epimerase: NAD depend 96.2 0.034 7.3E-07 43.6 8.1 74 83-159 1-75 (236)
428 PRK07502 cyclohexadienyl dehyd 96.2 0.068 1.5E-06 44.0 10.1 89 81-180 7-101 (307)
429 PRK14982 acyl-ACP reductase; P 96.2 0.084 1.8E-06 43.9 10.5 93 78-181 153-248 (340)
430 PRK06924 short chain dehydroge 96.2 0.053 1.1E-06 43.0 9.2 41 81-121 2-43 (251)
431 PLN02686 cinnamoyl-CoA reducta 96.1 0.052 1.1E-06 45.9 9.6 45 77-121 50-94 (367)
432 KOG4022 Dihydropteridine reduc 96.1 0.052 1.1E-06 39.5 7.9 96 80-181 3-131 (236)
433 PRK12748 3-ketoacyl-(acyl-carr 96.1 0.038 8.1E-07 44.1 8.2 35 79-113 4-40 (256)
434 COG1090 Predicted nucleoside-d 96.1 0.012 2.6E-07 46.7 5.0 66 83-159 1-66 (297)
435 PLN02989 cinnamyl-alcohol dehy 96.1 0.028 6.1E-07 46.6 7.7 38 79-116 4-41 (325)
436 PRK14192 bifunctional 5,10-met 96.1 0.11 2.4E-06 42.2 10.6 77 77-180 156-232 (283)
437 PRK06719 precorrin-2 dehydroge 96.1 0.076 1.6E-06 39.0 9.0 88 79-178 12-99 (157)
438 PRK12824 acetoacetyl-CoA reduc 96.1 0.051 1.1E-06 42.9 8.8 79 81-159 3-90 (245)
439 PLN02896 cinnamyl-alcohol dehy 96.1 0.081 1.8E-06 44.5 10.4 76 78-158 8-88 (353)
440 PRK11036 putative S-adenosyl-L 96.1 0.087 1.9E-06 42.1 10.1 94 78-179 43-149 (255)
441 PLN02986 cinnamyl-alcohol dehy 96.1 0.032 6.9E-07 46.2 7.8 38 79-116 4-41 (322)
442 cd01075 NAD_bind_Leu_Phe_Val_D 96.1 0.17 3.8E-06 38.8 11.2 81 78-170 26-107 (200)
443 PLN02653 GDP-mannose 4,6-dehyd 96.1 0.018 4E-07 48.1 6.4 37 79-115 5-41 (340)
444 COG1179 Dinucleotide-utilizing 96.1 0.1 2.2E-06 40.7 9.6 102 80-183 30-157 (263)
445 PRK06849 hypothetical protein; 96.0 0.1 2.3E-06 44.5 10.9 97 79-175 3-103 (389)
446 PRK07066 3-hydroxybutyryl-CoA 96.0 0.6 1.3E-05 38.7 14.8 40 80-120 7-46 (321)
447 TIGR01472 gmd GDP-mannose 4,6- 96.0 0.031 6.6E-07 46.8 7.3 35 81-115 1-35 (343)
448 TIGR02356 adenyl_thiF thiazole 96.0 0.1 2.2E-06 40.1 9.6 34 79-113 20-54 (202)
449 COG0623 FabI Enoyl-[acyl-carri 96.0 0.43 9.3E-06 37.1 12.6 186 77-263 3-244 (259)
450 PRK12859 3-ketoacyl-(acyl-carr 96.0 0.068 1.5E-06 42.7 9.0 33 79-111 5-39 (256)
451 TIGR01830 3oxo_ACP_reduc 3-oxo 95.9 0.051 1.1E-06 42.6 8.2 77 83-159 1-86 (239)
452 KOG1502 Flavonol reductase/cin 95.9 0.061 1.3E-06 44.1 8.5 75 79-159 5-88 (327)
453 PRK14191 bifunctional 5,10-met 95.9 0.17 3.7E-06 40.8 10.9 94 60-180 137-230 (285)
454 PRK08317 hypothetical protein; 95.9 0.087 1.9E-06 41.4 9.4 103 73-180 13-125 (241)
455 PRK08125 bifunctional UDP-gluc 95.9 0.039 8.5E-07 50.5 8.3 41 76-116 311-352 (660)
456 PRK14189 bifunctional 5,10-met 95.9 0.12 2.7E-06 41.7 10.0 94 60-180 138-231 (285)
457 COG1028 FabG Dehydrogenases wi 95.9 0.073 1.6E-06 42.2 8.9 81 79-159 4-96 (251)
458 PRK10258 biotin biosynthesis p 95.8 0.71 1.5E-05 36.7 15.5 95 77-180 40-141 (251)
459 cd05311 NAD_bind_2_malic_enz N 95.8 0.48 1E-05 37.2 12.9 89 78-178 23-127 (226)
460 PRK13656 trans-2-enoyl-CoA red 95.8 0.1 2.2E-06 44.1 9.5 79 78-159 39-141 (398)
461 PF08704 GCD14: tRNA methyltra 95.8 0.059 1.3E-06 42.7 7.7 102 73-180 34-147 (247)
462 PRK08618 ornithine cyclodeamin 95.8 0.12 2.6E-06 42.9 9.9 93 78-181 125-223 (325)
463 PLN03139 formate dehydrogenase 95.8 0.26 5.6E-06 41.9 11.9 89 79-180 198-292 (386)
464 PLN02214 cinnamoyl-CoA reducta 95.7 0.079 1.7E-06 44.4 8.9 38 79-116 9-46 (342)
465 PRK08655 prephenate dehydrogen 95.7 0.13 2.8E-06 44.6 10.3 44 82-126 2-46 (437)
466 PLN00203 glutamyl-tRNA reducta 95.7 0.18 3.8E-06 44.7 11.2 71 80-159 266-339 (519)
467 TIGR00715 precor6x_red precorr 95.7 0.029 6.3E-07 44.7 5.9 73 82-159 2-75 (256)
468 PRK14188 bifunctional 5,10-met 95.7 0.13 2.8E-06 41.9 9.6 92 60-180 138-231 (296)
469 PRK13243 glyoxylate reductase; 95.7 0.24 5.2E-06 41.3 11.5 87 79-180 149-241 (333)
470 PLN02696 1-deoxy-D-xylulose-5- 95.7 0.22 4.8E-06 42.8 11.2 96 81-179 58-180 (454)
471 TIGR00417 speE spermidine synt 95.7 0.16 3.5E-06 41.0 10.1 96 79-178 72-185 (270)
472 PF02882 THF_DHG_CYH_C: Tetrah 95.7 0.15 3.3E-06 37.5 8.9 95 59-180 15-109 (160)
473 PRK13255 thiopurine S-methyltr 95.7 0.062 1.3E-06 41.9 7.3 98 76-178 34-154 (218)
474 PLN02427 UDP-apiose/xylose syn 95.7 0.074 1.6E-06 45.3 8.5 75 78-158 12-95 (386)
475 PRK14194 bifunctional 5,10-met 95.7 0.13 2.9E-06 41.8 9.4 94 59-180 138-232 (301)
476 PRK12749 quinate/shikimate deh 95.6 0.19 4.1E-06 41.0 10.3 77 79-158 123-205 (288)
477 TIGR03466 HpnA hopanoid-associ 95.6 0.033 7.2E-07 46.1 6.2 71 82-158 2-73 (328)
478 PLN02695 GDP-D-mannose-3',5'-e 95.6 0.05 1.1E-06 46.1 7.3 37 78-114 19-55 (370)
479 PLN02650 dihydroflavonol-4-red 95.6 0.087 1.9E-06 44.2 8.7 41 79-119 4-44 (351)
480 PRK15116 sulfur acceptor prote 95.6 0.41 8.9E-06 38.5 11.8 33 79-112 29-62 (268)
481 PRK14103 trans-aconitate 2-met 95.6 0.11 2.5E-06 41.4 8.9 93 75-178 25-125 (255)
482 PLN02233 ubiquinone biosynthes 95.6 0.21 4.5E-06 40.2 10.3 97 75-180 69-183 (261)
483 TIGR01831 fabG_rel 3-oxoacyl-( 95.6 0.11 2.4E-06 40.9 8.6 76 83-158 1-85 (239)
484 cd05212 NAD_bind_m-THF_DH_Cycl 95.6 0.23 5E-06 35.7 9.4 94 60-180 8-101 (140)
485 PRK10792 bifunctional 5,10-met 95.6 0.17 3.7E-06 40.9 9.6 94 60-180 139-232 (285)
486 PF04321 RmlD_sub_bind: RmlD s 95.5 0.054 1.2E-06 44.1 7.0 59 82-158 2-60 (286)
487 PF03446 NAD_binding_2: NAD bi 95.5 0.31 6.6E-06 36.1 10.4 86 82-180 3-95 (163)
488 PF06325 PrmA: Ribosomal prote 95.5 0.014 3E-07 47.5 3.4 146 19-182 107-262 (295)
489 PRK14967 putative methyltransf 95.5 0.56 1.2E-05 36.7 12.4 94 75-178 32-158 (223)
490 COG3268 Uncharacterized conser 95.5 0.11 2.3E-06 42.5 8.2 93 81-178 7-103 (382)
491 TIGR01181 dTDP_gluc_dehyt dTDP 95.5 0.059 1.3E-06 44.3 7.2 73 82-159 1-83 (317)
492 PRK01683 trans-aconitate 2-met 95.5 0.28 6.1E-06 39.2 10.9 94 75-178 27-129 (258)
493 PRK07574 formate dehydrogenase 95.5 0.13 2.9E-06 43.6 9.2 89 79-180 191-285 (385)
494 TIGR02197 heptose_epim ADP-L-g 95.5 0.052 1.1E-06 44.6 6.8 73 83-158 1-75 (314)
495 TIGR00243 Dxr 1-deoxy-D-xylulo 95.5 0.32 6.9E-06 40.9 11.1 95 81-178 2-123 (389)
496 PF01118 Semialdhyde_dh: Semia 95.5 0.11 2.4E-06 36.3 7.4 90 82-180 1-98 (121)
497 PRK11908 NAD-dependent epimera 95.4 0.11 2.3E-06 43.6 8.6 37 82-118 3-40 (347)
498 PLN00198 anthocyanidin reducta 95.4 0.087 1.9E-06 44.0 8.0 38 79-116 8-45 (338)
499 COG0569 TrkA K+ transport syst 95.4 0.22 4.7E-06 39.0 9.6 80 82-165 2-82 (225)
500 PLN02240 UDP-glucose 4-epimera 95.4 0.11 2.4E-06 43.5 8.6 34 80-113 5-38 (352)
No 1
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.8e-43 Score=289.34 Aligned_cols=255 Identities=31% Similarity=0.466 Sum_probs=221.4
Q ss_pred CCccceEEEEecCCCCCCCCCCeEEec------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcC
Q 024411 3 PISGYGVAKVLDSENPEFNKGDLVWGM------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCS 76 (268)
Q Consensus 3 ~~~~~G~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~ 76 (268)
.+|++|+|+++|++|+.|++||+|+++ |+|+||.+++++.++++ |++++.. ++|++++.+.|||++|....+
T Consensus 62 G~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~-P~~ls~~-eAAal~~~~~TA~~~l~~~~~ 139 (326)
T COG0604 62 GSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPL-PDGLSFE-EAAALPLAGLTAWLALFDRAG 139 (326)
T ss_pred cceeEEEEEEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcC
Confidence 367799999999999999999999987 79999999999999999 9995554 489999999999999999899
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEe
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFE 155 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d 155 (268)
++++++|||+||+|++|++++|+||.+|+++++++.++++.+.++ ++|++++++|.++ ++.+.+++.+++ ++|+++|
T Consensus 140 l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~D 217 (326)
T COG0604 140 LKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVLD 217 (326)
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEEE
Confidence 999999999999999999999999999988888887888888888 9999999999987 899999999998 9999999
Q ss_pred CCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc-ccchHHHHHHHHHHHHcCCce
Q 024411 156 NVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLV 234 (268)
Q Consensus 156 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~ 234 (268)
++|+..+..+++.|+++|+++.+|..++ ......+...++.+.+...++..... +....+.++++.+++.+|.++
T Consensus 218 ~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~ 293 (326)
T COG0604 218 TVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLK 293 (326)
T ss_pred CCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999998663 12223446667778888887776532 245567888999999999999
Q ss_pred eeeehhcccccHHHHH--HHHHcCCccceEEEEe
Q 024411 235 YVEDMAEGLESAPAAL--IGLFSGQNVGKQVVAV 266 (268)
Q Consensus 235 ~~~~~~~~~~~~~~a~--~~~~~~~~~gkvvi~~ 266 (268)
+.+..+|||++..++. ..+. ++..||+|+++
T Consensus 294 ~~i~~~~~l~e~~~a~a~~~~~-~~~~GKvvl~~ 326 (326)
T COG0604 294 PVIDRVYPLAEAPAAAAHLLLE-RRTTGKVVLKV 326 (326)
T ss_pred ceeccEechhhhHHHHHHHHcc-cCCcceEEEeC
Confidence 9999999999954444 4444 58899999974
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=2.3e-42 Score=276.43 Aligned_cols=244 Identities=24% Similarity=0.325 Sum_probs=218.3
Q ss_pred ccceEEEEecCCCCCCCCCCeEEe-c------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 5 SGYGVAKVLDSENPEFNKGDLVWG-M------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 5 ~~~G~v~~vG~~v~~~~~Gd~V~~-~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
|+.|+|.+||++|++||+||||-. + |+|+||+++++..++++ |++++.
T Consensus 64 EivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~i-P~~~d~ 142 (339)
T COG1064 64 EIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKI-PEGLDL 142 (339)
T ss_pred ceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEEC-CCCCCh
Confidence 447888899999999999999954 2 89999999999999999 999554
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecC
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~ 133 (268)
. ++|.+.|++.|+|++|.. .+++||++|+|.|+ |++|++++|+|+.+|++|+++++++++.+.++ ++|++++++.+
T Consensus 143 ~-~aApllCaGiT~y~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~ 218 (339)
T COG1064 143 A-EAAPLLCAGITTYRALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSS 218 (339)
T ss_pred h-hhhhhhcCeeeEeeehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcC
Confidence 4 488999999999999955 79999999999998 79999999999999999999999999999999 99999999987
Q ss_pred ChhhHHHHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc
Q 024411 134 EEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH 213 (268)
Q Consensus 134 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (268)
+. +..+.+++. +|+++|+++...+...++.|+++|+++++|.... .+....+...++.+++++.|+..++
T Consensus 219 ~~-~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS~~g~- 288 (339)
T COG1064 219 DS-DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSLVGT- 288 (339)
T ss_pred Cc-hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEEecCC-
Confidence 54 677777664 9999999998889999999999999999998531 1223355677889999999999988
Q ss_pred ccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 214 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
..++++++++..+|+++|.+.+.++++++++|++.|.+++..|+.||+++
T Consensus 289 ----~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 ----RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred ----HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 88899999999999999999889999999999999999999999999875
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=4e-42 Score=257.97 Aligned_cols=257 Identities=22% Similarity=0.322 Sum_probs=225.2
Q ss_pred CCCccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCC
Q 024411 2 QPISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPK 78 (268)
Q Consensus 2 ~~~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (268)
|..|++|+|+.||++|+++++||||+.. |.|+|+..+|...++++ |+.+++. .+|++...++|||..+++..+++
T Consensus 68 pGmEaaGvVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~v-pe~i~~k-~aaa~llq~lTAy~ll~e~y~vk 145 (336)
T KOG1197|consen 68 PGMEAAGVVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKV-PEAITLK-EAAALLLQGLTAYMLLFEAYNVK 145 (336)
T ss_pred CCcccceEEEEecCCccccccccEEEEeccchhhheeccccceeeccC-CcccCHH-HHHHHHHHHHHHHHHHHHhcCCC
Confidence 3467899999999999999999999987 89999999999999999 9885554 37788889999999999999999
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENV 157 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~ 157 (268)
+|++||+|.|.||+|++++|+++..|+.++.++++.++.+.++ +.|+.++|++..+ ++.+++.+.++| |+|+++|.+
T Consensus 146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsv 223 (336)
T KOG1197|consen 146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSV 223 (336)
T ss_pred CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeeccc
Confidence 9999999999999999999999999999999999999999999 9999999999998 999999999987 999999999
Q ss_pred ChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc---ccchHHHHHHHHHHHHcCCce
Q 024411 158 GGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKLV 234 (268)
Q Consensus 158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~ 234 (268)
|.+.+...+.+|++.|.+|.+|..++. .+++.+.++..+++.+..-....+ +........+++.++.+|.++
T Consensus 224 G~dt~~~sl~~Lk~~G~mVSfG~asgl-----~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk 298 (336)
T KOG1197|consen 224 GKDTFAKSLAALKPMGKMVSFGNASGL-----IDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLK 298 (336)
T ss_pred cchhhHHHHHHhccCceEEEeccccCC-----CCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccc
Confidence 999999999999999999999987653 233445555566666554443333 223334567778888999999
Q ss_pred eeeehhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
+.+.++|||+++.+|+..++++...||+++-+.
T Consensus 299 ~~I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 299 IHIDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred eeeeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 999999999999999999999999999998764
No 4
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=7.1e-41 Score=278.77 Aligned_cols=264 Identities=70% Similarity=1.178 Sum_probs=220.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEeccccceeEeecCCc--ceeec-CCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAPH--LFKIQ-HTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~--~~~~~-p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
++|+|+|.+||++++.|++||+|+++|+|+||.+++... +.+++ |++++.+.+++++++++.|||+++...+.++++
T Consensus 80 ~~~~G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g 159 (348)
T PLN03154 80 IEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKG 159 (348)
T ss_pred eEeeEEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCC
Confidence 467899999999999999999999999999999999864 43332 777555434778999999999999888889999
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCChh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGK 160 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 160 (268)
++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++++|+++++++++.+++.+.+++.+++++|+++||+|+.
T Consensus 160 ~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~ 239 (348)
T PLN03154 160 DSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGD 239 (348)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHH
Confidence 99999999999999999999999999999999999999886469999999987421677777777666899999999998
Q ss_pred hHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceeeeehh
Q 024411 161 LLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240 (268)
Q Consensus 161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~ 240 (268)
.+..++++++++|+++.+|..++..........+...++.+++++.|+....+.....+.++++++++.+|++++.+..+
T Consensus 240 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~ 319 (348)
T PLN03154 240 MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMS 319 (348)
T ss_pred HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecc
Confidence 89999999999999999997543211111111245567788999998876544333456788999999999999988889
Q ss_pred cccccHHHHHHHHHcCCccceEEEEec
Q 024411 241 EGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 241 ~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
|+|+++++||+.+.+++..||+|+++.
T Consensus 320 ~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 320 EGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred cCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 999999999999999999999999875
No 5
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.1e-40 Score=255.30 Aligned_cols=264 Identities=51% Similarity=0.876 Sum_probs=238.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEeccccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEE
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECV 83 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~v 83 (268)
+.|.++...+-|+...|++||.|.+..+|+||..++.+.+.+++|...+++.....|.+++.|||.+|.+.+++++|+++
T Consensus 75 ~~gg~V~~Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~Getv 154 (340)
T COG2130 75 MVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETV 154 (340)
T ss_pred eECCeeEEEEecCCCCCCCCCEEEecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEE
Confidence 34444445567888999999999999999999999999999997766667766889999999999999999999999999
Q ss_pred EEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCChhhHH
Q 024411 84 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLD 163 (268)
Q Consensus 84 lI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 163 (268)
+|.+|+|.+|..+.|+||..|++|+.++.+++|.+++.+++|.+.++||+.+ ++.+.+.+.+++++|+.||++|++.++
T Consensus 155 vVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~D 233 (340)
T COG2130 155 VVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLD 233 (340)
T ss_pred EEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHH
Confidence 9999999999999999999999999999999999999966999999999998 999999999999999999999999999
Q ss_pred hHHHhhhcCCEEEEEcccccccCC-CCccccchHHHHhcceeeeeEEe-cccccchHHHHHHHHHHHHcCCceeeeehhc
Q 024411 164 AVLPNMKIRGRIAACGMISQYNLD-KPEGVHNLMYLVSKRLRMEGFIV-LDHYHLYPKFLEMIIPHIKEGKLVYVEDMAE 241 (268)
Q Consensus 164 ~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 241 (268)
..+..|+..+|++.+|..++++.. .+........++.+++++.|+.. ..+..+.++.++++.+|+++|+++...+.+-
T Consensus 234 Av~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~d 313 (340)
T COG2130 234 AVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVD 313 (340)
T ss_pred HHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehh
Confidence 999999999999999998887654 34455567778889999999999 4445666799999999999999999887777
Q ss_pred ccccHHHHHHHHHcCCccceEEEEecC
Q 024411 242 GLESAPAALIGLFSGQNVGKQVVAVAP 268 (268)
Q Consensus 242 ~~~~~~~a~~~~~~~~~~gkvvi~~~~ 268 (268)
+||++++||..|.+++..||+|+++.+
T Consensus 314 GlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 314 GLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhccHHHHHHHhcCCccceEEEEecC
Confidence 899999999999999999999999864
No 6
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=2.2e-38 Score=263.65 Aligned_cols=263 Identities=74% Similarity=1.244 Sum_probs=217.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEeccccceeEeecC-CcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcE
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITA-PHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGEC 82 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~ 82 (268)
++|.|+++.||++++.|++||+|+++|+|+||++++. +.++++||++++++.+++++++++.|||+++...+++++|++
T Consensus 75 ~~g~~~~~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~ 154 (338)
T cd08295 75 ITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGET 154 (338)
T ss_pred EeccEEEEEEecCCCCCCCCCEEEecCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCE
Confidence 3457888889999999999999999999999999999 789999556655553578899999999999988889999999
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCChhhH
Q 024411 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLL 162 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 162 (268)
|||+|++|++|++++|+|+.+|++|+++++++++.+.+++.+|+++++++.+.+++.+.+++.+++++|+++|++|+..+
T Consensus 155 VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~ 234 (338)
T cd08295 155 VFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKML 234 (338)
T ss_pred EEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHH
Confidence 99999999999999999999999999999999999999823999999987542267777777765689999999999889
Q ss_pred HhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceeeeehhcc
Q 024411 163 DAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEG 242 (268)
Q Consensus 163 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 242 (268)
..++++++++|+++.+|...+..........+....+.+++++.++....+.....+.++++++++.+|.+++.+...|+
T Consensus 235 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~ 314 (338)
T cd08295 235 DAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADG 314 (338)
T ss_pred HHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccC
Confidence 99999999999999998754321110001123455667778888766554433345678889999999999988777899
Q ss_pred cccHHHHHHHHHcCCccceEEEEe
Q 024411 243 LESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 243 ~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
++++++|++.+++++..||+|+++
T Consensus 315 l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 315 LESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHHhcCCCCceEEEEC
Confidence 999999999999999899999874
No 7
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-37 Score=242.70 Aligned_cols=247 Identities=21% Similarity=0.249 Sum_probs=212.3
Q ss_pred ccceEEEEecCCCCCCCCCCeEEec-------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 5 SGYGVAKVLDSENPEFNKGDLVWGM-------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 5 ~~~G~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
|.+|+|.+||++|+++|+||||..- |++++|++.+++.|+++ |++ +
T Consensus 68 EssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KL-Pd~--v 144 (354)
T KOG0024|consen 68 ESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKL-PDN--V 144 (354)
T ss_pred ccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeC-CCC--C
Confidence 5689999999999999999999521 89999999999999999 999 5
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
++++++|..+++++|||+ +++.+++|+++||+|| |++|+.+...||.+|+ +|++++-.+.+++.++ ++|++.+.+.
T Consensus 145 s~eeGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~ 221 (354)
T KOG0024|consen 145 SFEEGALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPS 221 (354)
T ss_pred chhhcccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeec
Confidence 556889999999999999 5689999999999998 9999999999999999 9999999999999999 8999876655
Q ss_pred CCh---hhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeee
Q 024411 133 KEE---ADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG 207 (268)
Q Consensus 133 ~~~---~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (268)
... ..+.+.++...++ .+|+.|||+|. ..++.++..++++|++++.|+.. ....++......+++++.|
T Consensus 222 ~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~------~~~~fpi~~v~~kE~~~~g 295 (354)
T KOG0024|consen 222 SHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA------EEIQFPIIDVALKEVDLRG 295 (354)
T ss_pred cccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC------CccccChhhhhhheeeeee
Confidence 442 1455566665554 79999999997 78999999999999999998743 3344566778899999999
Q ss_pred EEecccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCCc-cceEEEEecC
Q 024411 208 FIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQN-VGKQVVAVAP 268 (268)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~-~gkvvi~~~~ 268 (268)
+..+. +.++..+++++++|++. ++++..|++++..+||+.++++.. .-|+++..++
T Consensus 296 ~fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 296 SFRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 88865 66899999999999884 678899999999999999998764 4488887654
No 8
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=233.98 Aligned_cols=266 Identities=73% Similarity=1.273 Sum_probs=242.2
Q ss_pred CCCccceEEEEecCCCCCCCCCCeEEeccccceeEeecCCc--ceeec-CCCCCchhhhhhccchHHHHHHHhhhhcCCC
Q 024411 2 QPISGYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAPH--LFKIQ-HTDVPLSYYTGILGMPGMTAYVGFYEVCSPK 78 (268)
Q Consensus 2 ~~~~~~G~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~--~~~~~-p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (268)
.||+|.|+...+-++-+++++||.||++-+|.||.++++.. .++++ |.+++++....++.++++|||..+++.+.++
T Consensus 73 ~pi~g~GV~kVi~S~~~~~~~GD~v~g~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk 152 (343)
T KOG1196|consen 73 KPIDGFGVAKVIDSGHPNYKKGDLVWGIVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPK 152 (343)
T ss_pred cEecCCceEEEEecCCCCCCcCceEEEeccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCC
Confidence 36899999999999999999999999999999999998865 44441 3567788668899999999999999999999
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
+|++++|.||+|.+|+.+.|+|+.+|++|+..+.|+++.+.+++++|.+..+||.++.++.+.+++..++++|+.||.+|
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVG 232 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVG 232 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccC
Confidence 99999999999999999999999999999999999999999998899999999998657888888887889999999999
Q ss_pred hhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceeeee
Q 024411 159 GKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVED 238 (268)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 238 (268)
+..++..+..|+..||++.+|..+.++.+.+....+....+.+++++.|+...++.+...+.++.+..++++|+++..-+
T Consensus 233 G~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~ed 312 (343)
T KOG1196|consen 233 GKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVED 312 (343)
T ss_pred cHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehh
Confidence 99999999999999999999999888777666666778889999999999998888788999999999999999998887
Q ss_pred hhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 239 MAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 239 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
..-.|++.++||.-|.++...||.++.+.
T Consensus 313 i~~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 313 IADGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred HHHHHhccHHHHHHHhccCcccceEEEee
Confidence 77789999999999999999999999875
No 9
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=4.6e-36 Score=250.48 Aligned_cols=261 Identities=38% Similarity=0.677 Sum_probs=208.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec-cccceeEeecCCcceeecCCCCCc---hhhhhhccchHHHHHHHhhhhcCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM-TGWEEYSLITAPHLFKIQHTDVPL---SYYTGILGMPGMTAYVGFYEVCSPKH 79 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~~p~~~~~---~~~~a~l~~~~~~a~~~l~~~~~~~~ 79 (268)
.|++|+|.++|+++++|++||+|+++ ++|+||++++.+.++++ |++++. +..+++++.++.|||+++...+++++
T Consensus 74 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~ 152 (345)
T cd08293 74 LDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSSLEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITP 152 (345)
T ss_pred eEeeEEEEEeccCCCCCCCCCEEEecCCCceeEEEecHHHeEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCCC
Confidence 57899999999999999999999998 58999999999999999 876422 22245778899999999988878887
Q ss_pred C--cEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 80 G--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 80 ~--~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
+ ++|||+|++|++|++++|+|+.+|+ +|+++++++++.+.+++++|+++++++++. ++.+.+++.+++++|+++|+
T Consensus 153 g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid~ 231 (345)
T cd08293 153 GANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDN 231 (345)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEEC
Confidence 7 9999999999999999999999999 899999999999998745999999998876 88888888776689999999
Q ss_pred CChhhHHhHHHhhhcCCEEEEEcccccccCCCCc-cccc--hHH-HHhcceeeeeEEecccccchHHHHHHHHHHHHcCC
Q 024411 157 VGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPE-GVHN--LMY-LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK 232 (268)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (268)
+|+..+..++++++++|+++.+|........... .... ... ...+++++.++..........+.++++.+++.+|.
T Consensus 232 ~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 311 (345)
T cd08293 232 VGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGK 311 (345)
T ss_pred CCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCC
Confidence 9997789999999999999999864321000000 0111 111 12345554444332222233566888899999999
Q ss_pred ceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 233 LVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 233 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
+++....+++++++++|++.+.+++..||+|+++
T Consensus 312 i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 312 LKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred ccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 9987666779999999999999998899999874
No 10
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1e-35 Score=246.80 Aligned_cols=260 Identities=47% Similarity=0.824 Sum_probs=212.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEeccccceeEeecCC---cceeecCCCCCc--h--hhhhhccchHHHHHHHhhhhcC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAP---HLFKIQHTDVPL--S--YYTGILGMPGMTAYVGFYEVCS 76 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~---~~~~~~p~~~~~--~--~~~a~l~~~~~~a~~~l~~~~~ 76 (268)
+.|.+++..|-+.++.|++||+|+++++|++|++++.+ .++++ |++++. . ...++++++++|||+++...++
T Consensus 62 v~G~e~~G~V~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~ 140 (329)
T cd08294 62 MIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLEICK 140 (329)
T ss_pred EecceEEEEEecCCCCCCCCCEEEeeCCeeeEEEECCccccceEEC-CccccccCChHHHHHhcccHHHHHHHHHHHhcC
Confidence 44555444444667789999999999999999999999 99999 988541 1 1235788999999999988889
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
+++++++||+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++++.. ++.+.+++.+++++|+++|+
T Consensus 141 ~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~ 218 (329)
T cd08294 141 PKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDN 218 (329)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEEC
Confidence 999999999999999999999999999999999999999999999 8999999999876 88888888776689999999
Q ss_pred CChhhHHhHHHhhhcCCEEEEEcccccccCCCCc-cccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee
Q 024411 157 VGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPE-GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY 235 (268)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 235 (268)
+|+..+..++++++++|+++.+|........... .......++.+++++.++....+.....+.++++++++.+|.+++
T Consensus 219 ~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~ 298 (329)
T cd08294 219 VGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKY 298 (329)
T ss_pred CCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcC
Confidence 9998899999999999999999864322111111 112234566788888886654432334567888999999999998
Q ss_pred eeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 236 VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.+..+++++++++|++.+.+++..||+|+++
T Consensus 299 ~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 299 REHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred CcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 7767899999999999999999999999864
No 11
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=8.4e-36 Score=250.84 Aligned_cols=250 Identities=18% Similarity=0.241 Sum_probs=212.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------------------------------------------------ccc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------------------------------------------------TGW 32 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (268)
.|++|+|+++|++++++++||+|+.. |+|
T Consensus 67 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~ 146 (371)
T cd08281 67 HEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAF 146 (371)
T ss_pred ccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccc
Confidence 46789999999999999999999752 589
Q ss_pred ceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024411 33 EEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (268)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~ 111 (268)
+||++++++.++++ |++++.. +++.+.+++.+||+++...++++++++|+|+|+ |++|++++|+|+..|+ +|++++
T Consensus 147 aey~~v~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~ 223 (371)
T cd08281 147 AEYAVVSRRSVVKI-DKDVPLE-IAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVD 223 (371)
T ss_pred eeeEEecccceEEC-CCCCChH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc
Confidence 99999999999999 9985554 377788899999999877788999999999986 9999999999999999 699999
Q ss_pred CCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCc
Q 024411 112 GSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPE 190 (268)
Q Consensus 112 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 190 (268)
+++++.+.++ ++|+++++++.+. ++.+.+++.+++++|++|||+|. ..+..++++++++|+++.+|...+. ..
T Consensus 224 ~~~~r~~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~ 297 (371)
T cd08281 224 LNEDKLALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----AR 297 (371)
T ss_pred CCHHHHHHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ce
Confidence 9999999998 9999999988876 78888888776689999999997 7889999999999999999874321 11
Q ss_pred cccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 191 GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
...+...++.+++++.++....+. ..+.+.++++++.+|++++ .++++|+|+++++||+.+.+++..+|+++
T Consensus 298 ~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 298 LSVPALSLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred eeecHHHHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 234556778899999998765432 2456888999999999975 57789999999999999999988878763
No 12
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-36 Score=235.26 Aligned_cols=245 Identities=23% Similarity=0.265 Sum_probs=211.4
Q ss_pred ccceEEEEecCCCCCCCCCCeEE-e-----------------------------c--------cccceeEeecCCcceee
Q 024411 5 SGYGVAKVLDSENPEFNKGDLVW-G-----------------------------M--------TGWEEYSLITAPHLFKI 46 (268)
Q Consensus 5 ~~~G~v~~vG~~v~~~~~Gd~V~-~-----------------------------~--------g~~~~~~~v~~~~~~~~ 46 (268)
|++|+|+.||++|++|++||||= + . |+|++|+++++..++++
T Consensus 72 EiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kI 151 (360)
T KOG0023|consen 72 EIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKI 151 (360)
T ss_pred eeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEEC
Confidence 55889999999999999999991 0 0 56999999999999999
Q ss_pred cCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 024411 47 QHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF 126 (268)
Q Consensus 47 ~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~ 126 (268)
|++++++ .+|.+.|++.|+|.+|. ..++.||+++-|.|+ |++|.+++|+||.+|.+|+++++++.+.+.+.+.+|+
T Consensus 152 -P~~~pl~-~aAPlLCaGITvYspLk-~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGA 227 (360)
T KOG0023|consen 152 -PENLPLA-SAAPLLCAGITVYSPLK-RSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGA 227 (360)
T ss_pred -CCCCChh-hccchhhcceEEeehhH-HcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCc
Confidence 9997776 59999999999999994 567889999999998 6699999999999999999999998666666648999
Q ss_pred CeeeecC-ChhhHHHHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceee
Q 024411 127 DEAFNYK-EEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205 (268)
Q Consensus 127 ~~v~~~~-~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (268)
+.-++.. +. +..+.+...+.+++|-+.+. ....+..++.+++++|++|.+|.+.. ........+..+.+++
T Consensus 228 d~fv~~~~d~-d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~I 299 (360)
T KOG0023|consen 228 DVFVDSTEDP-DIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKSI 299 (360)
T ss_pred ceeEEecCCH-HHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEEE
Confidence 9877777 44 88888888776666666655 44678899999999999999998552 3445667778899999
Q ss_pred eeEEecccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
.|+..++ ....++++++.+++.+++.+ +..+++++++|++.|.++...++.|++++
T Consensus 300 ~GS~vG~-----~ket~E~Ldf~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 300 KGSIVGS-----RKETQEALDFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred Eeecccc-----HHHHHHHHHHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 9999988 88899999999999999877 47899999999999999999999999875
No 13
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.9e-36 Score=237.78 Aligned_cols=248 Identities=23% Similarity=0.275 Sum_probs=213.9
Q ss_pred ccceEEEEecCCCCCCCCCCeEEec---------------------------------------------------cccc
Q 024411 5 SGYGVAKVLDSENPEFNKGDLVWGM---------------------------------------------------TGWE 33 (268)
Q Consensus 5 ~~~G~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~~ 33 (268)
||+|+|++||++|+++|+||.|+.. ++|+
T Consensus 62 EgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa 141 (366)
T COG1062 62 EGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFA 141 (366)
T ss_pred ccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccch
Confidence 7899999999999999999999521 4899
Q ss_pred eeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeC
Q 024411 34 EYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAG 112 (268)
Q Consensus 34 ~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~ 112 (268)
||.++++.++.++ +++.|+. .++.+.|...|.+.+..+.+++++|+++.|.|. |++|++++|-|+..|+ ++++++.
T Consensus 142 ~y~vv~~~s~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~ 218 (366)
T COG1062 142 EYTVVHEISLVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDI 218 (366)
T ss_pred hheeecccceEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeC
Confidence 9999999999999 5554444 378899999999999999999999999999997 9999999999999999 9999999
Q ss_pred CHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCcc
Q 024411 113 SKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEG 191 (268)
Q Consensus 113 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 191 (268)
+++|++.++ ++|+++.+|.++..++.+.+++++++++|++|||+|+ ..+++++.++.++|+.+.+|.... ....
T Consensus 219 ~~~Kl~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----~~~i 293 (366)
T COG1062 219 NPEKLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----GQEI 293 (366)
T ss_pred CHHHHHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----Ccee
Confidence 999999999 9999999999875258999999999899999999999 889999999999999999998542 2223
Q ss_pred ccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 192 VHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
+.+..++... .++.|+..+.... +.++..+++++.+|++. .++++.++|+|++|||+.|.+++.. |-||
T Consensus 294 ~~~~~~lv~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi 364 (366)
T COG1062 294 STRPFQLVTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVI 364 (366)
T ss_pred ecChHHeecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEe
Confidence 3445565555 7889988876532 56799999999999886 4677899999999999999998876 4444
No 14
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.4e-35 Score=244.15 Aligned_cols=257 Identities=44% Similarity=0.723 Sum_probs=205.1
Q ss_pred CccceEEEEecCCCCCCCCCCeEEeccccceeEeecCCcceeec---CCCCCchhhh-hhccchHHHHHHHhhhhcCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAPHLFKIQ---HTDVPLSYYT-GILGMPGMTAYVGFYEVCSPKH 79 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~---p~~~~~~~~~-a~l~~~~~~a~~~l~~~~~~~~ 79 (268)
.+++|+|.++| +.|++||+|+++++|++|++++.+.+.+++ |++++.. ++ +++++++.|||+++...+++++
T Consensus 63 ~~~~g~v~~~~---~~~~~GdrV~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~-~aaa~l~~~~~TA~~~l~~~~~~~~ 138 (325)
T TIGR02825 63 QQVARVVESKN---VALPKGTIVLASPGWTSHSISDGKDLEKLLTEWPDTLPLS-LALGTVGMPGLTAYFGLLEICGVKG 138 (325)
T ss_pred ceEEEEEEeCC---CCCCCCCEEEEecCceeeEEechhheEEccccccCCCCHH-HHHHhcccHHHHHHHHHHHHhCCCC
Confidence 45566666655 469999999999999999999988866652 5664433 24 6789999999999988889999
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
+++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++.+.+.+.++...++++|+++|++|+
T Consensus 139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~ 217 (325)
T TIGR02825 139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGG 217 (325)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCH
Confidence 999999999999999999999999999999999999999998 8999999998763145556666655589999999999
Q ss_pred hhHHhHHHhhhcCCEEEEEcccccccCCCCcc-ccchHHHHhcceeeeeEEeccc-ccchHHHHHHHHHHHHcCCceeee
Q 024411 160 KLLDAVLPNMKIRGRIAACGMISQYNLDKPEG-VHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLVYVE 237 (268)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~~~ 237 (268)
..+..++++++++|+++.+|...+........ ......++.+++++.++....+ .....+.++++++++.+|++++.+
T Consensus 218 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~ 297 (325)
T TIGR02825 218 EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKE 297 (325)
T ss_pred HHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccce
Confidence 88899999999999999998754311100011 1123345667788887765433 223356788999999999999887
Q ss_pred ehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 238 DMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 238 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
..+|+++++++|++.+.+++..||+|++
T Consensus 298 ~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 298 YVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred eccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 7889999999999999999999999973
No 15
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.9e-35 Score=246.16 Aligned_cols=244 Identities=23% Similarity=0.273 Sum_probs=206.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-------------------------------ccccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-------------------------------MTGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
-|++|+|+++|++|+++++||+|+. .|+|+||++++.+.++++ |++++
T Consensus 60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~-P~~~~ 138 (339)
T cd08239 60 HEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPL-PDDLS 138 (339)
T ss_pred cCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEEC-CCCCC
Confidence 4679999999999999999999975 278999999999999999 88855
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeee
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFN 131 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~ 131 (268)
.. +++.+++++.|||+++. ...+.++++|||+|+ |++|++++|+++.+|++ |+++++++++.+.++ ++|++++++
T Consensus 139 ~~-~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~ 214 (339)
T cd08239 139 FA-DGALLLCGIGTAYHALR-RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVIN 214 (339)
T ss_pred HH-HhhhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEc
Confidence 44 37788899999999995 467899999999986 99999999999999998 999999999999998 999999998
Q ss_pred cCChhhHHHHHHHHCCC-CccEEEeCCChh-hHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEE
Q 024411 132 YKEEADLNAALKRYFPE-GIDIYFENVGGK-LLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (268)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (268)
+++. + .+.+.+.+++ ++|+++||+|+. .+..++++++++|+++.+|...+. . ......++.+++++.++.
T Consensus 215 ~~~~-~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~-~~~~~~~~~~~~~i~g~~ 286 (339)
T cd08239 215 SGQD-D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-----T-IEVSNDLIRKQRTLIGSW 286 (339)
T ss_pred CCcc-h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-----c-cCcHHHHHhCCCEEEEEe
Confidence 8775 5 6677777766 899999999984 568899999999999999874321 1 111245677899999877
Q ss_pred ecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 210 VLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
..+ .+.++++++++.+|.+++ .++++|+++++++||+.+.++. .||+|++|
T Consensus 287 ~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 287 YFS-----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred cCC-----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 654 567899999999998864 6788999999999999998875 69999975
No 16
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.1e-34 Score=240.07 Aligned_cols=250 Identities=22% Similarity=0.266 Sum_probs=208.7
Q ss_pred CccceEEEEecCCCCC-CCCCCeEEec----cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCC
Q 024411 4 ISGYGVAKVLDSENPE-FNKGDLVWGM----TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPK 78 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~-~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (268)
.|++|+|.++|+++++ |++||+|+++ |+|+||++++++.++++ |++++.. ++++++....|||.++ .....
T Consensus 66 ~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~- 141 (324)
T cd08291 66 FEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPL-PDGVSFE-QGASSFVNPLTALGML-ETARE- 141 (324)
T ss_pred cceEEEEEEECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEEC-CCCCCHH-HHhhhcccHHHHHHHH-Hhhcc-
Confidence 4678999999999996 9999999986 89999999999999999 8885544 3667788888998655 44555
Q ss_pred CCcEEEEe-cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeC
Q 024411 79 HGECVFIS-AASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFEN 156 (268)
Q Consensus 79 ~~~~vlI~-ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~ 156 (268)
+++.++|+ +++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++... ++.+.+++.+++ ++|+++|+
T Consensus 142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid~ 219 (324)
T cd08291 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFDA 219 (324)
T ss_pred CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEEC
Confidence 45556665 78899999999999999999999999999999998 8999999998876 888888888776 89999999
Q ss_pred CChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccc-cchHHHHHHHHHHHHcCCcee
Q 024411 157 VGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHIKEGKLVY 235 (268)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~~ 235 (268)
+|+......+++++++|+++.+|...+.. ....+...++.+++++.++....+. ....+.++++.+++. +.+++
T Consensus 220 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 294 (324)
T cd08291 220 VGGGLTGQILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKT 294 (324)
T ss_pred CCcHHHHHHHHhhCCCCEEEEEEecCCCC----cccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccccc
Confidence 99987888899999999999998743211 1123345667899999988876542 223567888889888 99999
Q ss_pred eeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 236 VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
.++++|+|+++++||+.+.+++..||+++
T Consensus 295 ~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 295 TFASRYPLALTLEAIAFYSKNMSTGKKLL 323 (324)
T ss_pred ceeeEEcHHHHHHHHHHHHhCCCCCeEEe
Confidence 99999999999999999999999999987
No 17
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.3e-34 Score=242.52 Aligned_cols=250 Identities=18% Similarity=0.237 Sum_probs=209.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-------------------------------------------ccccceeEeecC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-------------------------------------------MTGWEEYSLITA 40 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------------------~g~~~~~~~v~~ 40 (268)
-|++|+|+++|+++++|++||+|+. .|+|+||+++++
T Consensus 60 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~ 139 (358)
T TIGR03451 60 HEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHA 139 (358)
T ss_pred cceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEeh
Confidence 4679999999999999999999974 278999999999
Q ss_pred CcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 024411 41 PHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDL 119 (268)
Q Consensus 41 ~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~ 119 (268)
+.++++ |++++.. .++.++++..+||+++...+.++++++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.
T Consensus 140 ~~~~~i-p~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~ 216 (358)
T TIGR03451 140 GQCTKV-DPAADPA-AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEW 216 (358)
T ss_pred hheEEC-CCCCChh-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 999999 8885444 377888889999998877788999999999986 9999999999999999 59999999999999
Q ss_pred HHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHH
Q 024411 120 LKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMY 197 (268)
Q Consensus 120 ~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 197 (268)
++ ++|+++++++.+. ++.+.+++.+++ ++|+++||+|+ ..+..++++++++|+++.+|...+. .....+...
T Consensus 217 ~~-~~Ga~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~ 290 (358)
T TIGR03451 217 AR-EFGATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLD 290 (358)
T ss_pred HH-HcCCceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHH
Confidence 98 9999999988776 777888888776 89999999997 6889999999999999999874321 112344556
Q ss_pred HHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 198 LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
++.+++++.++..... ...+.++++++++++|.+++ .++++|+++++++||+.+++++.. |+++.
T Consensus 291 ~~~~~~~i~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 291 VFGRGGALKSSWYGDC--LPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HhhcCCEEEEeecCCC--CcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 7788888888754321 12566888999999999965 578899999999999999888765 77765
No 18
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.3e-34 Score=242.18 Aligned_cols=252 Identities=19% Similarity=0.240 Sum_probs=208.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------------------------------------------------ccc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------------------------------------------------TGW 32 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (268)
-|++|+|.++|+++++|++||+|+.. |+|
T Consensus 69 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~ 148 (378)
T PLN02827 69 HEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSF 148 (378)
T ss_pred ccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccc
Confidence 47899999999999999999999852 689
Q ss_pred ceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024411 33 EEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (268)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~ 111 (268)
+||++++++.++++ |++++.. +++.+.+++.++|+++...++++++++|||+|+ |++|++++|+|+..|+ .|++++
T Consensus 149 aeyv~v~~~~~~~i-P~~l~~~-~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~ 225 (378)
T PLN02827 149 SEYTVVHSGCAVKV-DPLAPLH-KICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVD 225 (378)
T ss_pred eeeEEechhheEEC-CCCCCHH-HhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence 99999999999999 9985543 367778888899988877778999999999986 9999999999999999 577788
Q ss_pred CCHHHHHHHHHhcCCCeeeecCCh-hhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcC-CEEEEEcccccccCCC
Q 024411 112 GSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIR-GRIAACGMISQYNLDK 188 (268)
Q Consensus 112 ~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 188 (268)
+++++.+.++ ++|+++++++++. +++.+.+++.+++++|+++|++|. ..+..+++.++++ |+++.+|...+
T Consensus 226 ~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~----- 299 (378)
T PLN02827 226 INPEKAEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA----- 299 (378)
T ss_pred CCHHHHHHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-----
Confidence 8999999998 9999888887641 156677777766689999999998 5789999999998 99999987432
Q ss_pred Cccccc-hHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 189 PEGVHN-LMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 189 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
. .... ...++.+++++.|+....+. ....++++++++.+|++++ .++++|+|+++++|++.+.+++. .|+||.
T Consensus 300 ~-~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~ 375 (378)
T PLN02827 300 K-PEVSAHYGLFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIH 375 (378)
T ss_pred C-ccccccHHHHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEE
Confidence 1 1122 23567789999987765432 2456888999999999988 78889999999999999998876 699998
Q ss_pred ecC
Q 024411 266 VAP 268 (268)
Q Consensus 266 ~~~ 268 (268)
+.+
T Consensus 376 ~~~ 378 (378)
T PLN02827 376 MPK 378 (378)
T ss_pred ecC
Confidence 753
No 19
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-34 Score=240.54 Aligned_cols=240 Identities=18% Similarity=0.222 Sum_probs=199.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-----------------------------------ccccceeEeecCCcceeecC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-----------------------------------MTGWEEYSLITAPHLFKIQH 48 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~~p 48 (268)
-|++|+|+++ ++++|++||+|+. .|+|+||++++++.++++ |
T Consensus 65 hE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~-P 141 (343)
T PRK09880 65 HEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPY-P 141 (343)
T ss_pred cccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEEC-C
Confidence 4778999999 7889999999973 278999999999999999 8
Q ss_pred CCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC
Q 024411 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD 127 (268)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~ 127 (268)
++++ ++++++..++.+||+++.+. ...++++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++
T Consensus 142 ~~l~--~~~aa~~~~~~~a~~al~~~-~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~ 216 (343)
T PRK09880 142 EKAD--EKVMAFAEPLAVAIHAAHQA-GDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGAD 216 (343)
T ss_pred CCCC--HHHHHhhcHHHHHHHHHHhc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCc
Confidence 8844 34556778889999999654 5668999999997 9999999999999999 6999999999999999 89999
Q ss_pred eeeecCChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeee
Q 024411 128 EAFNYKEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRME 206 (268)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (268)
++++++++ ++.+ +... .+++|++|||+|. ..+..++++++++|+++.+|.... ....++..++.+++++.
T Consensus 217 ~vi~~~~~-~~~~-~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~ 287 (343)
T PRK09880 217 KLVNPQND-DLDH-YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLK 287 (343)
T ss_pred EEecCCcc-cHHH-Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEE
Confidence 99988775 5443 2222 2369999999998 678999999999999999987321 12345567778899998
Q ss_pred eEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 207 GFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
++..+ .+.++++++++.+|++++ .++++|+++++++|++.+.+++..||+++.+
T Consensus 288 g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 288 GSFRF------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred EEeec------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 87643 345888999999999975 5778999999999999999888789999874
No 20
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=2.4e-34 Score=240.67 Aligned_cols=242 Identities=17% Similarity=0.217 Sum_probs=198.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe--------------------------------------ccccceeEeecCCccee
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG--------------------------------------MTGWEEYSLITAPHLFK 45 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~ 45 (268)
-|++|+|+++|++|++|++||+|+. .|+|+||++++.+.+++
T Consensus 72 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~ 151 (360)
T PLN02586 72 HEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLR 151 (360)
T ss_pred cceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeee
Confidence 4679999999999999999999973 27899999999999999
Q ss_pred ecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHhc
Q 024411 46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD-LLKNKF 124 (268)
Q Consensus 46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~-~~~~~~ 124 (268)
+ |++++.. +++++++.+.|||+++.....++++++|+|.|+ |++|++++|+|+.+|++|++++.++++.. .++ ++
T Consensus 152 l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~-~~ 227 (360)
T PLN02586 152 F-PDNLPLD-AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN-RL 227 (360)
T ss_pred C-CCCCCHH-HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH-hC
Confidence 9 9985554 377889999999999977666789999999886 99999999999999999998887766544 445 89
Q ss_pred CCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcce
Q 024411 125 GFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRL 203 (268)
Q Consensus 125 g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 203 (268)
|+++++++... +.+++.++ ++|++||++|. ..+..++++++++|+++.+|.... ....+...++.++.
T Consensus 228 Ga~~vi~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~ 296 (360)
T PLN02586 228 GADSFLVSTDP----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRK 296 (360)
T ss_pred CCcEEEcCCCH----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCe
Confidence 99888876642 23444443 69999999997 678899999999999999986421 12244555666777
Q ss_pred eeeeEEecccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.+.++..++ .+.++++++++.+|++++.+ ++|+|+++++||+.+.+++..||+|+++
T Consensus 297 ~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 297 LVGGSDIGG-----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred EEEEcCcCC-----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 777766544 45689999999999999876 4799999999999999998889999976
No 21
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.4e-35 Score=238.62 Aligned_cols=257 Identities=25% Similarity=0.378 Sum_probs=203.4
Q ss_pred CccceEEEE---ec-CCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhc-
Q 024411 4 ISGYGVAKV---LD-SENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC- 75 (268)
Q Consensus 4 ~~~~G~v~~---vG-~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~- 75 (268)
.+|.|++.. +| ..+..+..||.+... |+|+||.++++..++++ |+++++. ++|++|.+..|||.++...+
T Consensus 71 ~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~-P~~l~~~-~aa~~p~~~~tA~~al~~~~~ 148 (347)
T KOG1198|consen 71 RDGSGVVGAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKI-PESLSFE-EAAALPLAALTALSALFQLAP 148 (347)
T ss_pred cccCCceeEEeccccccccceEeeeEEeeccCCCceeeEEEcchhhccCC-CCccChh-hhhcCchHHHHHHHHHHhccc
Confidence 445555333 34 444557777777776 89999999999999999 9995554 48899999999999999999
Q ss_pred -----CCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCc
Q 024411 76 -----SPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGI 150 (268)
Q Consensus 76 -----~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~ 150 (268)
+++++++|||+||+|++|++++|+|++.++..++++.++++.++++ ++|+++++||+++ ++.+.++..++++|
T Consensus 149 ~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~~~ 226 (347)
T KOG1198|consen 149 GKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKDE-NVVELIKKYTGKGV 226 (347)
T ss_pred cccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCCH-HHHHHHHhhcCCCc
Confidence 8999999999999999999999999999965555555899999999 9999999999997 99999999884499
Q ss_pred cEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeee--EEecc----cccchHHHHHHH
Q 024411 151 DIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG--FIVLD----HYHLYPKFLEMI 224 (268)
Q Consensus 151 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~ 224 (268)
|+|+||+|+........++..+|+...++...+...+.... ..+. ..+.+++.. ....+ +.....+.++.+
T Consensus 227 DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 303 (347)
T KOG1198|consen 227 DVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLD--DLWQ-SANGIKLYSLGLKGVNYRWLYFVPSAEYLKAL 303 (347)
T ss_pred cEEEECCCCCccccchhhhccCCceEEEEeccccccccccc--cchh-hhhhhhheeeeeeccceeeeeecCCHHHHHHH
Confidence 99999999988888899999888766666544332221111 1111 111111111 11111 144567889999
Q ss_pred HHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 225 IPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 225 ~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
.+++.+++++|.+.++||++++++|++.+.+++.+||++++++
T Consensus 304 ~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 304 VELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred HHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 9999999999999999999999999999999999999999875
No 22
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=5.1e-34 Score=238.20 Aligned_cols=252 Identities=22% Similarity=0.237 Sum_probs=202.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe------------------------------ccccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG------------------------------MTGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
-|++|+|+++|+++++|++||+|++ .|+|+||++++.+.++++ |+++
T Consensus 59 ~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~l-P~~~-- 135 (347)
T PRK10309 59 HEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFAL-PTDM-- 135 (347)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEEC-cCCC--
Confidence 4679999999999999999999986 278999999999999999 8884
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
+++.+++..+..++++++ ....+.++++|+|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|+++++++
T Consensus 136 s~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~ 212 (347)
T PRK10309 136 PIEDGAFIEPITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNS 212 (347)
T ss_pred CHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecC
Confidence 444333333566788886 5567899999999985 99999999999999996 788888999999998 8999988888
Q ss_pred CChhhHHHHHHHHCCC-Ccc-EEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEE
Q 024411 133 KEEADLNAALKRYFPE-GID-IYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~d-~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (268)
++. . ...+.+.+.+ ++| +++||+|+ ..+..++++++++|+++.+|...+. . ......+..++.+++++.|+.
T Consensus 213 ~~~-~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~~~~~~~~~~~~~~i~g~~ 287 (347)
T PRK10309 213 REM-S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-L--HLTSATFGKILRKELTVIGSW 287 (347)
T ss_pred ccc-C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-c--ccChhhhhHHhhcCcEEEEEe
Confidence 764 4 4556666665 888 99999997 6889999999999999999874321 1 011112345677889999876
Q ss_pred ecccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 210 VLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.........+.++++++++.+|.++ +.++++|+|+++++|++.+.+++..||+++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 288 MNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred ccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 5422112246788899999999884 67888999999999999999988889999976
No 23
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.2e-34 Score=238.91 Aligned_cols=242 Identities=17% Similarity=0.208 Sum_probs=200.0
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe--------------------------------------ccccceeEeecCCccee
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG--------------------------------------MTGWEEYSLITAPHLFK 45 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~ 45 (268)
-|++|+|.++|+++++|++||+|+. .|+|+||++++++.+++
T Consensus 66 hE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~ 145 (375)
T PLN02178 66 HEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLS 145 (375)
T ss_pred ceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEE
Confidence 3679999999999999999999963 27899999999999999
Q ss_pred ecCCCCCchhhhhhccchHHHHHHHhhhhcC-CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHh
Q 024411 46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCS-PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKNK 123 (268)
Q Consensus 46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~-~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~-~~~~~~~ 123 (268)
+ |++++.. +++++++...|+|+++..... .+++++|+|.|+ |++|++++|+|+.+|++|+++++++++ .+.++ +
T Consensus 146 l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~ 221 (375)
T PLN02178 146 I-PDGLPSD-SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-R 221 (375)
T ss_pred C-CCCCCHH-HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-h
Confidence 9 9885544 377888999999999865433 368999999986 999999999999999999999877654 67776 8
Q ss_pred cCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcc
Q 024411 124 FGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKR 202 (268)
Q Consensus 124 ~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 202 (268)
+|+++++++.+. +.+.+.++ ++|+++||+|. ..+..++++++++|+++.+|...+ ...++...++.++
T Consensus 222 lGa~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~ 290 (375)
T PLN02178 222 LGADSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLGR 290 (375)
T ss_pred CCCcEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhCC
Confidence 999988876542 24444443 69999999998 478999999999999999987421 1234556777889
Q ss_pred eeeeeEEecccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 203 LRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
+++.|+...+ .+.++++++++.+|++++.+ .+|+|+++++||+.+.+++..||+|+.+
T Consensus 291 ~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 291 KMVGGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred eEEEEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 9998876654 46788899999999999877 4699999999999999998889999986
No 24
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.3e-33 Score=238.22 Aligned_cols=251 Identities=18% Similarity=0.223 Sum_probs=205.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe------------------------------------------------------c
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG------------------------------------------------------M 29 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~------------------------------------------------------~ 29 (268)
-|++|+|+++|+++++|++||+|++ .
T Consensus 71 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 150 (381)
T PLN02740 71 HEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNT 150 (381)
T ss_pred ccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccC
Confidence 4679999999999999999999974 2
Q ss_pred cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEE
Q 024411 30 TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVV 108 (268)
Q Consensus 30 g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~ 108 (268)
|+|+||++++.+.++++ |++++.. .++.+.+++.|||+++...++++++++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus 151 G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi 227 (381)
T PLN02740 151 STFTEYTVLDSACVVKI-DPNAPLK-KMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKII 227 (381)
T ss_pred ccceeEEEEehHHeEEC-CCCCCHH-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEE
Confidence 68999999999999999 8885544 377788899999999877788999999999996 9999999999999999 699
Q ss_pred EEeCCHHHHHHHHHhcCCCeeeecCCh-hhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcC-CEEEEEccccccc
Q 024411 109 GSAGSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIR-GRIAACGMISQYN 185 (268)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~ 185 (268)
++++++++.+.++ ++|+++++++.+. .++.+.+++.+++++|+++|++|+ ..+..++.+++++ |+++.+|...+.
T Consensus 228 ~~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~- 305 (381)
T PLN02740 228 GVDINPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP- 305 (381)
T ss_pred EEcCChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC-
Confidence 9999999999998 9999888887653 147777877766589999999997 7889999999996 999999874321
Q ss_pred CCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEE
Q 024411 186 LDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQV 263 (268)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv 263 (268)
.........+ .++.++.|+....+.. ...+.++++++.++.+++ .++++|+|+++++|++.+.+++. .|++
T Consensus 306 ---~~~~~~~~~~-~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~ 378 (381)
T PLN02740 306 ---KMLPLHPMEL-FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCL 378 (381)
T ss_pred ---ceecccHHHH-hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEE
Confidence 1111222223 3678888876654321 356888999999998864 57889999999999999988765 4998
Q ss_pred EEe
Q 024411 264 VAV 266 (268)
Q Consensus 264 i~~ 266 (268)
|+.
T Consensus 379 ~~~ 381 (381)
T PLN02740 379 LHL 381 (381)
T ss_pred EeC
Confidence 863
No 25
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.4e-33 Score=235.47 Aligned_cols=251 Identities=20% Similarity=0.234 Sum_probs=201.1
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------------------------------------------------ccc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------------------------------------------------TGW 32 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (268)
-|++|+|+++|+++++|++||+|+.. |+|
T Consensus 61 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~ 140 (368)
T TIGR02818 61 HEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTF 140 (368)
T ss_pred cccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccc
Confidence 56899999999999999999999752 489
Q ss_pred ceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024411 33 EEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (268)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~ 111 (268)
+||++++.+.++++ |++++.. +++.+++++.+||+++...++++++++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus 141 aey~~v~~~~~~~l-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~ 217 (368)
T TIGR02818 141 SEYTVVPEISLAKI-NPAAPLE-EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAID 217 (368)
T ss_pred eeeEEechhheEEC-CCCCCHH-HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence 99999999999999 8885554 377888899999999977788999999999986 9999999999999999 799999
Q ss_pred CCHHHHHHHHHhcCCCeeeecCC-hhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcC-CEEEEEcccccccCCC
Q 024411 112 GSKDKVDLLKNKFGFDEAFNYKE-EADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIR-GRIAACGMISQYNLDK 188 (268)
Q Consensus 112 ~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 188 (268)
+++++.+.++ ++|+++++++.+ ..++.+.+++.+++++|+++||+|+ ..+..++++++++ |+++.+|...+.
T Consensus 218 ~~~~~~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~---- 292 (368)
T TIGR02818 218 INPAKFELAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG---- 292 (368)
T ss_pred CCHHHHHHHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----
Confidence 9999999998 999998888764 1156677777776689999999997 6788999999886 999999874311
Q ss_pred CccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.........++ .+..+.++..... .....+.++++++.+|+++ +.++++|+|+++++|++.+.+++. .|+++.+
T Consensus 293 ~~~~~~~~~~~-~~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 293 QEISTRPFQLV-TGRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred CcccccHHHHh-ccceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 11112222333 2334555543221 1245688899999999885 467889999999999999988764 6998874
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.9e-33 Score=232.60 Aligned_cols=235 Identities=17% Similarity=0.110 Sum_probs=197.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-------------------------------ccccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-------------------------------MTGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.|++|+|+++|+++++|++||+|+. .|+|+||+.++.+.++++ |++++
T Consensus 62 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~l-P~~~~ 140 (329)
T TIGR02822 62 HEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRL-PTGYD 140 (329)
T ss_pred cceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEEC-CCCCC
Confidence 5789999999999999999999973 278999999999999999 88855
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
.. +++.+++++.|||+++. .++++++++|||+|+ |++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++
T Consensus 141 ~~-~aa~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~ 216 (329)
T TIGR02822 141 DV-ELAPLLCAGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGGA 216 (329)
T ss_pred HH-HhHHHhccchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceeccc
Confidence 44 37788899999999995 578999999999997 99999999999999999999999999999999 9999998875
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEec
Q 024411 133 KEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (268)
.+. . .+++|+++++.+. ..+..++++++++|+++.+|...+. ...++...++.+++++.++...
T Consensus 217 ~~~-~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~ 281 (329)
T TIGR02822 217 YDT-P---------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTD-----TPPLNYQRHLFYERQIRSVTSN 281 (329)
T ss_pred ccc-C---------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCcc-----CCCCCHHHHhhCCcEEEEeecC
Confidence 431 1 1258999988875 7889999999999999999874221 1123455667788888887644
Q ss_pred ccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
. .+.+.++++++.+|++++ ++++|+|+++++||+.+.+++..||+|+
T Consensus 282 ~-----~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 282 T-----RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred C-----HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 3 556788899999999985 5678999999999999999999999987
No 27
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.9e-33 Score=234.05 Aligned_cols=243 Identities=23% Similarity=0.262 Sum_probs=207.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-------------------------------ccccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-------------------------------MTGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.|++|+|+++|++++.|++||+|++ .|+|+||+.++.+.++++ |+++
T Consensus 70 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~l-P~~~- 147 (351)
T cd08233 70 HEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKL-PDNV- 147 (351)
T ss_pred ccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEEC-cCCC-
Confidence 4689999999999999999999985 378999999999999999 8884
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeee
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFN 131 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~ 131 (268)
+++.+++..+..+||+++ ..++++++++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.+++
T Consensus 148 -~~~~aa~~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~ 223 (351)
T cd08233 148 -PLEEAALVEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVLD 223 (351)
T ss_pred -CHHHhhhccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEC
Confidence 434444457888999999 6778999999999986 9999999999999999 8999998999999998 899999999
Q ss_pred cCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEE
Q 024411 132 YKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (268)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (268)
+++. ++.+.+++.+++ ++|+++|++|. ..+..++++++++|+++.+|... .....+...++.+++++.++.
T Consensus 224 ~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~------~~~~~~~~~~~~~~~~i~g~~ 296 (351)
T cd08233 224 PTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE------KPISFNPNDLVLKEKTLTGSI 296 (351)
T ss_pred CCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC------CCCccCHHHHHhhCcEEEEEe
Confidence 8876 788888888776 79999999996 78899999999999999998743 112345667778899998876
Q ss_pred ecccccchHHHHHHHHHHHHcCCce--eeeehhcccccH-HHHHHHHHcCCcc-ceEEE
Q 024411 210 VLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESA-PAALIGLFSGQNV-GKQVV 264 (268)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~-~~a~~~~~~~~~~-gkvvi 264 (268)
.+. .+.++++++++.+|.++ +.+.++|+++++ ++|++.+.+++.. +|+||
T Consensus 297 ~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 297 CYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred ccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 543 56789999999999995 457788999996 7999999988864 89987
No 28
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=6.2e-33 Score=233.44 Aligned_cols=249 Identities=19% Similarity=0.239 Sum_probs=204.4
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec----------------------------------------------------cc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM----------------------------------------------------TG 31 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~----------------------------------------------------g~ 31 (268)
.|++|+|+++|+++++|++||+|+.. |+
T Consensus 62 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~ 141 (369)
T cd08301 62 HEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTST 141 (369)
T ss_pred cccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeecccc
Confidence 57899999999999999999999853 57
Q ss_pred cceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024411 32 WEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS 110 (268)
Q Consensus 32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~ 110 (268)
|+||+++++..++++ |++++.. +++.+++++.+||+++...++++++++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus 142 ~aey~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~ 218 (369)
T cd08301 142 FSEYTVVHVGCVAKI-NPEAPLD-KVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGV 218 (369)
T ss_pred ceeEEEEecccEEEC-CCCCCHH-HhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999999999 8885554 377888889999999888888999999999986 9999999999999999 89999
Q ss_pred eCCHHHHHHHHHhcCCCeeeecCCh-hhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcC-CEEEEEcccccccCC
Q 024411 111 AGSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIR-GRIAACGMISQYNLD 187 (268)
Q Consensus 111 ~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 187 (268)
++++++.+.++ ++|++.++++... +.+.+.+++.+++++|+++|++|. ..+..++++++++ |+++.+|.....
T Consensus 219 ~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~--- 294 (369)
T cd08301 219 DLNPSKFEQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD--- 294 (369)
T ss_pred cCCHHHHHHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC---
Confidence 99999999998 8999888877641 156677777766689999999997 6788999999996 999999875421
Q ss_pred CCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
.........+ .+++++.|+....+. ....++++++++.++.++. .++++|+|+++++||+.+.+++.. |+++
T Consensus 295 -~~~~~~~~~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 295 -AVFSTHPMNL-LNGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred -cccccCHHHH-hcCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 1112222333 368888887665432 2456888999999998764 477889999999999999988764 8876
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.3e-33 Score=232.08 Aligned_cols=244 Identities=20% Similarity=0.192 Sum_probs=202.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe--------------------------------------ccccceeEeecCCccee
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG--------------------------------------MTGWEEYSLITAPHLFK 45 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~ 45 (268)
.|++|+|+++|+++++|++||+|+. .|+|+||++++.+.+++
T Consensus 69 ~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~ 148 (357)
T PLN02514 69 HEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVK 148 (357)
T ss_pred ceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEE
Confidence 3679999999999999999999963 27899999999999999
Q ss_pred ecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 024411 46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG 125 (268)
Q Consensus 46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g 125 (268)
+ |++++.. +++++++.+.+||+++......+++++++|+|+ |++|++++|+|+.+|++|+++++++++...+.+++|
T Consensus 149 i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~G 225 (357)
T PLN02514 149 I-PEGMAPE-QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLG 225 (357)
T ss_pred C-CCCCCHH-HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcC
Confidence 9 8885554 377899999999999977666789999999975 999999999999999999999888877766654799
Q ss_pred CCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhccee
Q 024411 126 FDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (268)
Q Consensus 126 ~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (268)
+++++++... ..+.+.+. ++|+++||+|. ..+..++++++++|+++.+|...+ ....+...++.++++
T Consensus 226 a~~~i~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~ 294 (357)
T PLN02514 226 ADDYLVSSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLGRKV 294 (357)
T ss_pred CcEEecCCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhCCcE
Confidence 9877765442 23444333 69999999996 688899999999999999987431 123445667788899
Q ss_pred eeeEEecccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
+.|+.... ...++++++++.+|++++.++ +|+++++++||+.+.+++..||+++.+.
T Consensus 295 i~g~~~~~-----~~~~~~~~~~~~~g~l~~~i~-~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 295 ITGSFIGS-----MKETEEMLEFCKEKGLTSMIE-VVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred EEEEecCC-----HHHHHHHHHHHHhCCCcCcEE-EEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 99887655 457889999999999988774 7999999999999999988899999874
No 30
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=6.8e-33 Score=232.97 Aligned_cols=250 Identities=23% Similarity=0.293 Sum_probs=202.0
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------------------------------------------------ccc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------------------------------------------------TGW 32 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (268)
.|++|+|+++|+++++|++||+|++. |+|
T Consensus 62 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~ 141 (368)
T cd08300 62 HEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTF 141 (368)
T ss_pred cceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccc
Confidence 47899999999999999999999753 479
Q ss_pred ceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024411 33 EEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (268)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~ 111 (268)
+||+.++.+.++++ |++++.. .++.+++++.+||+++...++++++++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus 142 aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~ 218 (368)
T cd08300 142 SEYTVVAEISVAKI-NPEAPLD-KVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGID 218 (368)
T ss_pred eeEEEEchhceEeC-CCCCChh-hhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence 99999999999999 8885554 377888899999999877788999999999986 9999999999999999 799999
Q ss_pred CCHHHHHHHHHhcCCCeeeecCChh-hHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcC-CEEEEEcccccccCCC
Q 024411 112 GSKDKVDLLKNKFGFDEAFNYKEEA-DLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIR-GRIAACGMISQYNLDK 188 (268)
Q Consensus 112 ~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 188 (268)
+++++.+.++ ++|+++++++.+.+ ++.+.+.+.+++++|+++|++|+ ..+..++++++++ |+++.+|...+.
T Consensus 219 ~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~---- 293 (368)
T cd08300 219 INPDKFELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG---- 293 (368)
T ss_pred CCHHHHHHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----
Confidence 9999999998 99999999887531 47777887776689999999997 6889999999886 999999874311
Q ss_pred CccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
.........+. .+..+.++....+. ..+.+.++++++.+|++++ .++++|+|+++++||+.+.+++. .|++++
T Consensus 294 ~~~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 294 QEISTRPFQLV-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred CccccCHHHHh-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 01111222222 33455665544332 2566888999999999875 57789999999999999988764 588874
No 31
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=6.4e-33 Score=229.61 Aligned_cols=252 Identities=19% Similarity=0.227 Sum_probs=213.8
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.|++|+|+++|++++.+++||+|+++ |+|++|++++...++++ |++++.. +++.++....+||+++. ..++.++
T Consensus 64 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~~~-~~~~~~g 140 (324)
T cd08292 64 SEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPL-PDGISDE-VAAQLIAMPLSALMLLD-FLGVKPG 140 (324)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEEC-CCCCCHH-HhhhccccHHHHHHHHH-hhCCCCC
Confidence 46799999999999999999999985 89999999999999999 8885444 36777888899999984 5789999
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG 159 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~ 159 (268)
+++||+|++|.+|++++|+|+.+|++++++++++++.+.++ ++|+++++++++. ++...+.+.+++ ++|+++||+|+
T Consensus 141 ~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~ 218 (324)
T cd08292 141 QWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGG 218 (324)
T ss_pred CEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCC
Confidence 99999999999999999999999999999999999999888 7898888888876 788888888887 99999999999
Q ss_pred hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccc-----cchHHHHHHHHHHHHcCCce
Q 024411 160 KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-----HLYPKFLEMIIPHIKEGKLV 234 (268)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~l~ 234 (268)
.....++++++++|+++.+|...+ .....+....+.+++++.++....+. ....+.++++++++.+|.++
T Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~ 293 (324)
T cd08292 219 KLAGELLSLLGEGGTLVSFGSMSG-----EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLL 293 (324)
T ss_pred hhHHHHHHhhcCCcEEEEEecCCC-----CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence 888899999999999999986421 11223444566789999988765431 22356788899999999998
Q ss_pred eeeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
+.+..+|+++++++|++.+.++...+|++++
T Consensus 294 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 294 LPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred CccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 6667789999999999999988888898863
No 32
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=8.4e-33 Score=230.89 Aligned_cols=245 Identities=19% Similarity=0.251 Sum_probs=203.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe------------------------------ccccceeEeecCCcceeecCC----
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG------------------------------MTGWEEYSLITAPHLFKIQHT---- 49 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~---- 49 (268)
-|++|+|.++|++++.+ +||+|+. .|+|+||++++.+.++++ |+
T Consensus 59 hE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~i-p~~~~~ 136 (349)
T TIGR03201 59 HEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVV-DEARLA 136 (349)
T ss_pred ccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEEC-Cccccc
Confidence 47899999999999887 9999985 279999999999999999 76
Q ss_pred --CCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC
Q 024411 50 --DVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD 127 (268)
Q Consensus 50 --~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~ 127 (268)
+++.. .++++++++.++|+++.. ..++++++|+|+|+ |++|++++|+|+..|++|+++++++++.+.++ ++|++
T Consensus 137 ~~~~~~~-~~a~~~~~~~ta~~a~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~ 212 (349)
T TIGR03201 137 AAGLPLE-HVSVVADAVTTPYQAAVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGAD 212 (349)
T ss_pred ccCCCHH-HhhhhcchHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCc
Confidence 64443 367888999999999864 68999999999998 99999999999999999999999999999998 89998
Q ss_pred eeeecCCh--hhHHHHHHHHCCC-Ccc----EEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHH
Q 024411 128 EAFNYKEE--ADLNAALKRYFPE-GID----IYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLV 199 (268)
Q Consensus 128 ~v~~~~~~--~~~~~~~~~~~~~-~~d----~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 199 (268)
+++++.+. +++.+.+++.+++ ++| +++||+|+ ..+..++++++++|+++.+|...+ ....+...++
T Consensus 213 ~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~ 286 (349)
T TIGR03201 213 LTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA------KTEYRLSNLM 286 (349)
T ss_pred eEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC------CcccCHHHHh
Confidence 88887652 1466777777776 776 89999998 567789999999999999987432 1233445666
Q ss_pred hcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 200 SKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.++.++.+....+ .+.++++++++.+|++++ .++ +|+|+++++||+.+.+++..||+++++
T Consensus 287 ~~~~~~~g~~~~~-----~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 287 AFHARALGNWGCP-----PDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred hcccEEEEEecCC-----HHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 6777777765433 567889999999999865 444 689999999999999998889998853
No 33
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.6e-33 Score=215.50 Aligned_cols=249 Identities=21% Similarity=0.257 Sum_probs=212.3
Q ss_pred ccceEEEEecCCCCCCCCCCeEEec----------------------------------------------------ccc
Q 024411 5 SGYGVAKVLDSENPEFNKGDLVWGM----------------------------------------------------TGW 32 (268)
Q Consensus 5 ~~~G~v~~vG~~v~~~~~Gd~V~~~----------------------------------------------------g~~ 32 (268)
|++|+|+.||++|+++++||+|+.. .+|
T Consensus 68 EaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StF 147 (375)
T KOG0022|consen 68 EAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTF 147 (375)
T ss_pred cceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccc
Confidence 6799999999999999999999632 379
Q ss_pred ceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024411 33 EEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (268)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~ 111 (268)
+||.+++...+.++ ++..|++ ..+.|.+...|.|.|..+.+.+++|+++.|+|- |++|+++++-|+..|+ +++.++
T Consensus 148 sEYTVv~~~~v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvD 224 (375)
T KOG0022|consen 148 SEYTVVDDISVAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVD 224 (375)
T ss_pred eeEEEeecceeEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEe
Confidence 99999999999999 4454555 488899999999999999999999999999997 9999999999999999 999999
Q ss_pred CCHHHHHHHHHhcCCCeeeecCCh-hhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcC-CEEEEEcccccccCCC
Q 024411 112 GSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIR-GRIAACGMISQYNLDK 188 (268)
Q Consensus 112 ~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 188 (268)
-++++++.++ ++|+++.+|..+. ...++.+++++.+++|+-|||+|+ ..+++++.+.+.+ |+-|.+|.... .
T Consensus 225 iN~~Kf~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~----~ 299 (375)
T KOG0022|consen 225 INPDKFEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA----G 299 (375)
T ss_pred cCHHHHHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----C
Confidence 9999999999 9999998888741 158889999999999999999999 8889999999997 99999997542 1
Q ss_pred CccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
......+.+++ .+.++.|+..+.+.. ++++..+++.+.+++++ ..+++.+||+++++||+.|.+++.. |.|+.
T Consensus 300 ~~i~~~p~~l~-~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 300 QEISTRPFQLV-TGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred cccccchhhhc-cccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 22333444544 467788888777643 77899999999999775 5688899999999999999999877 66654
No 34
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.2e-32 Score=229.62 Aligned_cols=248 Identities=19% Similarity=0.252 Sum_probs=201.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec--------------------------------------------------cccc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM--------------------------------------------------TGWE 33 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~--------------------------------------------------g~~~ 33 (268)
.|++|+|+++|++++++++||+|++. |+|+
T Consensus 61 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a 140 (365)
T cd08277 61 HEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFS 140 (365)
T ss_pred cceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccce
Confidence 47899999999999999999999763 6899
Q ss_pred eeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeC
Q 024411 34 EYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAG 112 (268)
Q Consensus 34 ~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~ 112 (268)
||++++.+.++++ |++++.. +++.+.+++.+||+++...+.++++++|+|+|+ |++|++++|+|+.+|+ +|+++++
T Consensus 141 e~~~v~~~~~~~l-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~ 217 (365)
T cd08277 141 QYTVVDENYVAKI-DPAAPLE-HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDI 217 (365)
T ss_pred eeEEEchhheEEC-CCCCCHH-HhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence 9999999999999 8885544 377888899999999877788999999999985 9999999999999999 7999999
Q ss_pred CHHHHHHHHHhcCCCeeeecCCh-hhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcC-CEEEEEcccccccCCCC
Q 024411 113 SKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIR-GRIAACGMISQYNLDKP 189 (268)
Q Consensus 113 ~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~ 189 (268)
++++.+.++ ++|++++++..+. .++.+.+++.+++++|+++||+|+ ..+..++++++++ |+++.+|...+..
T Consensus 218 ~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---- 292 (365)
T cd08277 218 NEDKFEKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAE---- 292 (365)
T ss_pred CHHHHHHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccc----
Confidence 999999998 8999888887652 135666777666689999999996 7788999999885 9999998753211
Q ss_pred ccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 190 EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
...+...++. +.++.++..+.+. ....++++++++.++.++ +.++++|+|+++++|++.+.+++ ..|+++
T Consensus 293 -~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i 364 (365)
T cd08277 293 -LSIRPFQLIL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI 364 (365)
T ss_pred -cccCHhHHhh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence 1122333433 6788877665432 244678899999988755 56788999999999999998877 458876
No 35
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=5.1e-32 Score=227.38 Aligned_cols=248 Identities=21% Similarity=0.223 Sum_probs=200.3
Q ss_pred CccceEEEEecCCCCC------CCCCCeEEec-------------------------------------cccceeEeecC
Q 024411 4 ISGYGVAKVLDSENPE------FNKGDLVWGM-------------------------------------TGWEEYSLITA 40 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~------~~~Gd~V~~~-------------------------------------g~~~~~~~v~~ 40 (268)
.|++|+|.++|++++. |++||+|+.+ |+|+||+.+++
T Consensus 60 ~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 139 (361)
T cd08231 60 HEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPP 139 (361)
T ss_pred cCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecC
Confidence 4679999999999986 9999999764 78999999999
Q ss_pred C-cceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 024411 41 P-HLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVD 118 (268)
Q Consensus 41 ~-~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~ 118 (268)
+ .++++ |++++.. .++.+++++.|||+++......+++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 140 ~~~~~~l-P~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~ 216 (361)
T cd08231 140 GTAIVRV-PDNVPDE-VAAPANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLE 216 (361)
T ss_pred CCceEEC-CCCCCHH-HHHHhcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 7 69999 8884433 366777999999999987776779999999985 9999999999999999 9999999999999
Q ss_pred HHHHhcCCCeeeecCChhhH---HHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCcccc
Q 024411 119 LLKNKFGFDEAFNYKEEADL---NAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH 193 (268)
Q Consensus 119 ~~~~~~g~~~v~~~~~~~~~---~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 193 (268)
.++ ++|++.+++++.. .+ ...+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|..... .....
T Consensus 217 ~~~-~~g~~~vi~~~~~-~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~ 290 (361)
T cd08231 217 LAR-EFGADATIDIDEL-PDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPL 290 (361)
T ss_pred HHH-HcCCCeEEcCccc-ccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----Ccccc
Confidence 988 8999888877653 32 3467777766 89999999987 6788999999999999999864311 11223
Q ss_pred chHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcC----CceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 194 NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG----KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
....++.+++++.++...+ .+.++++++++.++ .+.+.+.++|+++++++||+.+.+++. +|++|++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 291 DPERIVRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred CHHHHhhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 3445678888888876543 44567777777766 345567788999999999999988764 7999864
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=4.9e-32 Score=230.54 Aligned_cols=250 Identities=17% Similarity=0.136 Sum_probs=196.9
Q ss_pred CccceEEEEecCCCC-CCCCCCeEEec-------------------cccceeEeecCC----cceeecCCCCCchhhhhh
Q 024411 4 ISGYGVAKVLDSENP-EFNKGDLVWGM-------------------TGWEEYSLITAP----HLFKIQHTDVPLSYYTGI 59 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~-~~~~Gd~V~~~-------------------g~~~~~~~v~~~----~~~~~~p~~~~~~~~~a~ 59 (268)
-|++|+|+++|++|+ +|++||||+.. |+|+||++++.+ .++++ |+++ +++.++
T Consensus 68 hE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~l-P~~l--~~~~aa 144 (410)
T cd08238 68 HEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLI-YEGD--GYAEAS 144 (410)
T ss_pred cccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEEC-CCCC--CHHHHh
Confidence 367999999999998 59999999762 899999999997 58999 8884 434444
Q ss_pred ccchHH---HHHHHh--------hhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHhc-
Q 024411 60 LGMPGM---TAYVGF--------YEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC---YVVGSAGSKDKVDLLKNKF- 124 (268)
Q Consensus 60 l~~~~~---~a~~~l--------~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~---~V~~~~~~~~~~~~~~~~~- 124 (268)
+..+.. +++.++ ...++++++++|+|+|++|++|++++|+|+.+|+ +|+++++++++.+.++ ++
T Consensus 145 l~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~ 223 (410)
T cd08238 145 LVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLF 223 (410)
T ss_pred hcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-Hhc
Confidence 433322 233332 2346789999999999889999999999999864 8999999999999998 65
Q ss_pred -------CCC-eeeecCC-hhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCcccc
Q 024411 125 -------GFD-EAFNYKE-EADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH 193 (268)
Q Consensus 125 -------g~~-~v~~~~~-~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 193 (268)
|++ .++++.. . ++.+.+++.+++ ++|+++|++|. ..+..++++++++|+++.++..... .....+
T Consensus 224 ~~~~~~~Ga~~~~i~~~~~~-~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~---~~~~~~ 299 (410)
T cd08238 224 PPEAASRGIELLYVNPATID-DLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDK---NFSAPL 299 (410)
T ss_pred cccccccCceEEEECCCccc-cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCC---Cccccc
Confidence 655 4677654 3 677788888777 89999999986 8889999999999988776442110 011234
Q ss_pred chHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 194 NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
+...++.+++++.|+.... ...++++++++.+|++++ .++++|+|+++++|++.+. ++..||+|+.++
T Consensus 300 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 300 NFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred cHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 5567788999999876544 567889999999999987 6788999999999999999 777899999864
No 37
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.2e-31 Score=227.54 Aligned_cols=248 Identities=19% Similarity=0.260 Sum_probs=206.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec-------------------------------cccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM-------------------------------TGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.|++|+|+++|++++.+++||+|++. |+|++|++++.+.++++ |++++
T Consensus 87 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~i-P~~l~ 165 (393)
T cd08246 87 SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPK-PKHLS 165 (393)
T ss_pred cceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEEC-CCCCC
Confidence 46789999999999999999999864 78999999999999999 88854
Q ss_pred chhhhhhccchHHHHHHHhhhh--cCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeee
Q 024411 53 LSYYTGILGMPGMTAYVGFYEV--CSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF 130 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~--~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~ 130 (268)
.. +++.+++++.+||+++... ++++++++++|+|++|++|++++++++.+|++++++++++++.+.++ ++|+++++
T Consensus 166 ~~-~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~~~~i 243 (393)
T cd08246 166 WE-EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGAEGVI 243 (393)
T ss_pred HH-HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCCEEE
Confidence 44 3678899999999998755 67899999999999999999999999999999999999999999998 89998888
Q ss_pred ecCCh---------------------hhHHHHHHHHCCC--CccEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCC
Q 024411 131 NYKEE---------------------ADLNAALKRYFPE--GIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLD 187 (268)
Q Consensus 131 ~~~~~---------------------~~~~~~~~~~~~~--~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 187 (268)
++++. ..+.+.+.+.+++ ++|+++||+|+..+..++++++++|+++.+|.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~--- 320 (393)
T cd08246 244 NRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY--- 320 (393)
T ss_pred cccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC---
Confidence 76431 0245667777665 699999999998889999999999999999864321
Q ss_pred CCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcC-CccceEEE
Q 024411 188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSG-QNVGKQVV 264 (268)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi 264 (268)
....+...++.++.++.+..... .+.+.++++++.++.+.+.+.++++++++++|++.+.++ +..||+++
T Consensus 321 --~~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 321 --NHTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred --CCCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence 11233455666777777765544 456888999999999988777889999999999999988 78899886
No 38
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=1.6e-31 Score=221.28 Aligned_cols=253 Identities=23% Similarity=0.287 Sum_probs=213.8
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec-----cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM-----TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPK 78 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (268)
.+++|+|+++|++++.+++||+|+++ |+|++|++++.+.++++ |++++.. +++++++.+++|| ++....+++
T Consensus 65 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~a~~~~~~~~ta~-~~~~~~~~~ 141 (324)
T cd08244 65 GEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPV-PDGLDLE-AAVAVVHDGRTAL-GLLDLATLT 141 (324)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeC-CCCCCHH-HHhhhcchHHHHH-HHHHhcCCC
Confidence 46789999999999999999999984 79999999999999999 8885544 3778899999995 555677899
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENV 157 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~ 157 (268)
++++++|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++.+. ++.+.+.+.+++ ++|+++|++
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~ 219 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDGV 219 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEECC
Confidence 9999999999999999999999999999999999999999997 8999888888776 777788877776 899999999
Q ss_pred ChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc-ccchHHHHHHHHHHHHcCCceee
Q 024411 158 GGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLVYV 236 (268)
Q Consensus 158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~~ 236 (268)
|+.....++++++++|+++.+|..... ....+....+.+++++.++..... +....+.++++.+++.++.+++.
T Consensus 220 g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 294 (324)
T cd08244 220 GGAIGRAALALLAPGGRFLTYGWASGE-----WTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPV 294 (324)
T ss_pred ChHhHHHHHHHhccCcEEEEEecCCCC-----CCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCc
Confidence 998789999999999999999874321 112333455788888888776543 22345678888999999999877
Q ss_pred eehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 237 EDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 237 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
+...++++++++|++.+.++...||+++++
T Consensus 295 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 295 VGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 778899999999999999999999999864
No 39
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=3.7e-32 Score=208.00 Aligned_cols=255 Identities=23% Similarity=0.295 Sum_probs=209.0
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec----cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM----TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKH 79 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~ 79 (268)
=||.|.|+.||++++.|++||.|+.. |+|++|.+.+++.++++ ++.+++. .||++....+|||..|...-++++
T Consensus 83 nEGv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~ 160 (354)
T KOG0025|consen 83 NEGVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNK 160 (354)
T ss_pred CcceEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccceEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCC
Confidence 36788899999999999999999876 89999999999999999 7777766 599999999999999999999999
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeeecCChhhHHHHHHHHCCC-CccEEEe
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFE 155 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d 155 (268)
|++|+-.||++++|++++|+|+.+|++-+-+.|+-.+++++++ .+|+++|+...+- .-.+..+..... .+.+.||
T Consensus 161 GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel-~~~~~~k~~~~~~~prLalN 239 (354)
T KOG0025|consen 161 GDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL-RDRKMKKFKGDNPRPRLALN 239 (354)
T ss_pred CCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh-cchhhhhhhccCCCceEEEe
Confidence 9999999999999999999999999999988887777666543 5799999854431 111122222223 7899999
Q ss_pred CCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc------ccchHHHHHHHHHHHH
Q 024411 156 NVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH------YHLYPKFLEMIIPHIK 229 (268)
Q Consensus 156 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 229 (268)
|+|+.......+.|..||..+.+|..+. .........++.+++++.|++...| ++...+.+.++.+++.
T Consensus 240 cVGGksa~~iar~L~~GgtmvTYGGMSk-----qPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~ 314 (354)
T KOG0025|consen 240 CVGGKSATEIARYLERGGTMVTYGGMSK-----QPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYR 314 (354)
T ss_pred ccCchhHHHHHHHHhcCceEEEecCccC-----CCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHH
Confidence 9999988999999999999999998653 3344556677899999999999887 3334567889999999
Q ss_pred cCCceeeeehhcccccHHHHHHHHHcC-CccceEEEEe
Q 024411 230 EGKLVYVEDMAEGLESAPAALIGLFSG-QNVGKQVVAV 266 (268)
Q Consensus 230 ~g~l~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi~~ 266 (268)
.|+++.+.....+|++...|++...+. ...||-++.+
T Consensus 315 ~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 315 RGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred cCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 999999888888999988888866543 3345666654
No 40
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.6e-31 Score=222.03 Aligned_cols=242 Identities=21% Similarity=0.256 Sum_probs=206.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-------------------------------ccccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-------------------------------MTGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.|++|+|+++|++++++++||+|+. .|+++||+.++.+.++++ |++++
T Consensus 60 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~l-p~~~~ 138 (333)
T cd08296 60 HEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARI-PDDLD 138 (333)
T ss_pred cceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeC-CCCCC
Confidence 4688999999999999999999975 278999999999999999 88854
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
.. .++.+++++.+||+++... .+.++++|+|+| +|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++
T Consensus 139 ~~-~aa~l~~~~~ta~~~~~~~-~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~ 214 (333)
T cd08296 139 AA-EAAPLLCAGVTTFNALRNS-GAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDT 214 (333)
T ss_pred HH-HhhhhhhhhHHHHHHHHhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecC
Confidence 43 3778899999999999655 899999999999 699999999999999999999999999999998 8999889988
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCC-hhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEec
Q 024411 133 KEEADLNAALKRYFPEGIDIYFENVG-GKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (268)
.+. ++...+.+. +++|+++|+.| +..+..++++++++|+++.+|... ....++...++.+++++.++...
T Consensus 215 ~~~-~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~------~~~~~~~~~~~~~~~~i~~~~~~ 285 (333)
T cd08296 215 SKE-DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAG------EPVAVSPLQLIMGRKSIHGWPSG 285 (333)
T ss_pred CCc-cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCC------CCCCcCHHHHhhcccEEEEeCcC
Confidence 876 676666655 36999999997 478899999999999999998743 11234455667899999997754
Q ss_pred ccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
. ...++.+.+++.++.+++.+ ..++++++++||+.+.+++.+||+|++
T Consensus 286 ~-----~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 286 T-----ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred C-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 3 56688888999999998775 479999999999999999999999874
No 41
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.9e-31 Score=223.16 Aligned_cols=245 Identities=22% Similarity=0.268 Sum_probs=204.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec----------------------cccceeEeecCCcceeecCCCCCchhhhhhcc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM----------------------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILG 61 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~----------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~ 61 (268)
.|++|+|+++|+++++|++||+|++. |+|++|+.++.+.++++ |++++.. ++++++
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~a~l~ 160 (350)
T cd08274 83 ADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPV-NSPLSDV-ELATFP 160 (350)
T ss_pred CcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeC-CCCCCHH-HHHhcc
Confidence 46789999999999999999999872 78999999999999999 8885544 377899
Q ss_pred chHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHH
Q 024411 62 MPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAA 141 (268)
Q Consensus 62 ~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 141 (268)
+++.+||+++ ...++++++++||+|++|++|++++++++.+|++|+++++++ +.+.++ ++|++.+++.... ....
T Consensus 161 ~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~- 235 (350)
T cd08274 161 CSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVILRDAP-LLAD- 235 (350)
T ss_pred cHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEeCCCc-cHHH-
Confidence 9999999998 667899999999999999999999999999999999998665 788887 8998765555443 3333
Q ss_pred HHHHCCC-CccEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHH
Q 024411 142 LKRYFPE-GIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF 220 (268)
Q Consensus 142 ~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (268)
...+.+ ++|+++|++|+..+..++++++++|+++.+|.... .....+...++.+++++.++.... .+.
T Consensus 236 -~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 304 (350)
T cd08274 236 -AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGSTLGT-----REV 304 (350)
T ss_pred -HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEeecCC-----HHH
Confidence 344444 89999999999889999999999999999986321 112344556678888988877643 677
Q ss_pred HHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 221 LEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 221 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
++++.+++.++.+++.+..+++++++++|++.+.++...+|+++++
T Consensus 305 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 305 FRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 8999999999999887778899999999999999888889999864
No 42
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=2.9e-31 Score=220.18 Aligned_cols=256 Identities=51% Similarity=0.841 Sum_probs=210.0
Q ss_pred CccceEEEEecCCCCCCCCCCeEEeccccceeEeecC-CcceeecCCCCC--chhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITA-PHLFKIQHTDVP--LSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~~p~~~~--~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.+++|+|+++|++ .+++||+|+++++|++|+.++. +.++++ |++++ ....++++++++.+||+++.....+.++
T Consensus 70 ~e~~G~V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~~~~l-P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~ 146 (329)
T cd05288 70 GGGVGEVVESRSP--DFKVGDLVSGFLGWQEYAVVDGASGLRKL-DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPG 146 (329)
T ss_pred CceEEEEEecCCC--CCCCCCEEecccceEEEEEecchhhcEEC-CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCC
Confidence 4778999999964 7999999999999999999999 999999 88853 2222344899999999999887889999
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh-cCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK-FGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
++|+|+|++|++|++++|+++..|++|+++++++++.+.++ + +|+++++++++. ++...+.+.+++++|+++||+|+
T Consensus 147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~ 224 (329)
T cd05288 147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV-EELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGG 224 (329)
T ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchH
Confidence 99999999999999999999999999999999999999988 5 999888888876 77777777765589999999999
Q ss_pred hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceeeeeh
Q 024411 160 KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239 (268)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 239 (268)
..+..++++++++|+++.+|..............+....+.+++++.++..........+.+.++.+++.++.+++....
T Consensus 225 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~ 304 (329)
T cd05288 225 EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDV 304 (329)
T ss_pred HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccc
Confidence 88999999999999999998644221100000233456677888888876654333335678889999999999877667
Q ss_pred hcccccHHHHHHHHHcCCccceEEE
Q 024411 240 AEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 240 ~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
.+++++++++++.+.+++..+|+++
T Consensus 305 ~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 305 VEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred cccHHHHHHHHHHHhcCCCccceeC
Confidence 7899999999999998888888874
No 43
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=3.4e-31 Score=219.20 Aligned_cols=253 Identities=22% Similarity=0.297 Sum_probs=214.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.+++|+|..+|++++.+++||+|+++ |+|++|++++.+.++++ |++++.. +++.+++...+||+++...+.+.++
T Consensus 62 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~~a~~~~~~~ta~~~~~~~~~~~~~ 139 (323)
T cd05282 62 NEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPV-PDSISDE-QAAMLYINPLTAWLMLTEYLKLPPG 139 (323)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEeCCCCcceeEEecCHHHeEEC-CCCCCHH-HHHHHhccHHHHHHHHHHhccCCCC
Confidence 46789999999999999999999995 79999999999999999 8885443 3777888999999999888888999
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG 159 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~ 159 (268)
++++|+|++|.+|++++++|+.+|++++++++++++.+.++ ++|+++++++... ++...+.+.+++ ++|+++||+|+
T Consensus 140 ~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~ 217 (323)
T cd05282 140 DWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGG 217 (323)
T ss_pred CEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCC
Confidence 99999999999999999999999999999999999999997 8999888888775 777888888776 89999999999
Q ss_pred hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccc-----cchHHHHHHHHHHHHcCCce
Q 024411 160 KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-----HLYPKFLEMIIPHIKEGKLV 234 (268)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~l~ 234 (268)
......+++++++|+++.+|..... ....+...+..+++++.++....+. ....+.++++.+++.++.+.
T Consensus 218 ~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 292 (323)
T cd05282 218 ESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLT 292 (323)
T ss_pred HHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcc
Confidence 7778889999999999999874321 1123333444488998888765532 23446788899999999998
Q ss_pred eeeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
+.+...++++++++|++.+.+++..+|++++
T Consensus 293 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 293 TPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred cCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 7777889999999999999998888899863
No 44
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=5.5e-31 Score=218.90 Aligned_cols=256 Identities=23% Similarity=0.356 Sum_probs=212.8
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.+++|+|.++|++++.+++||+|+++ |+|++|++++.+.++++ |++++.. +++.+++++.+||+++...+.+.++
T Consensus 64 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~ 141 (334)
T PTZ00354 64 LEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHI-PQGYTFE-EAAAIPEAFLTAWQLLKKHGDVKKG 141 (334)
T ss_pred eeeEEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 46789999999999999999999997 79999999999999999 8885443 3778899999999999887889999
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhh-HHHHHHHHCCC-CccEEEeCCC
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD-LNAALKRYFPE-GIDIYFENVG 158 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~~~~~~~~-~~d~v~d~~g 158 (268)
++++|+|++|++|++++++|+..|++++++++++++.+.++ ++|.+.+++.... + +...++..+++ ++|+++|+.+
T Consensus 142 ~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~ 219 (334)
T PTZ00354 142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCVG 219 (334)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECCc
Confidence 99999999999999999999999999888998999999998 8999888887664 4 77788887766 8999999999
Q ss_pred hhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccc-----cchHHHHHHHHHHHHcCCc
Q 024411 159 GKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-----HLYPKFLEMIIPHIKEGKL 233 (268)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~l 233 (268)
+..+..++++++++|+++.++...+... ...+...++.++.++.+....... ....+.++++.+++.++.+
T Consensus 220 ~~~~~~~~~~l~~~g~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 295 (334)
T PTZ00354 220 GSYLSETAEVLAVDGKWIVYGFMGGAKV----EKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEI 295 (334)
T ss_pred hHHHHHHHHHhccCCeEEEEecCCCCcc----cccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCc
Confidence 8888999999999999999986432111 113445556676677776544321 1222456778899999999
Q ss_pred eeeeehhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
.+.+...+++++++++++.+.+++..+|+|+++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 296 KPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred cCccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 8877788999999999999998888899999875
No 45
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.9e-31 Score=221.21 Aligned_cols=255 Identities=25% Similarity=0.282 Sum_probs=210.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec----cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM----TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKH 79 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~ 79 (268)
.+++|+|.++|+++..|++||+|++. |+|++|+.++.+.++++ |++++.. +++.+++++.+||+++.....+++
T Consensus 69 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~ 146 (341)
T cd08290 69 NEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKV-PNDVDPE-QAATLSVNPCTAYRLLEDFVKLQP 146 (341)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEeC-CCCCCHH-HHHHhhccHHHHHHHHHhhcccCC
Confidence 47899999999999999999999986 89999999999999999 8885443 377889999999999987788999
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHhcCCCeeeecCCh--hhHHHHHHHHCCCCccEE
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKVDLLKNKFGFDEAFNYKEE--ADLNAALKRYFPEGIDIY 153 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~----~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~~~~~~~~d~v 153 (268)
+++|||+|++|++|++++|+|+..|++++++++++ ++.+.++ ++|++++++++.. .++...++...++++|++
T Consensus 147 g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~v 225 (341)
T cd08290 147 GDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKLA 225 (341)
T ss_pred CCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccccHHHHHHHHcCCCceEE
Confidence 99999999999999999999999999999998776 6678887 8999988877641 035556666554479999
Q ss_pred EeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccc-----cchHHHHHHHHHHH
Q 024411 154 FENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-----HLYPKFLEMIIPHI 228 (268)
Q Consensus 154 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 228 (268)
+||+|+..+...+++++++|+++.+|..... ....+...++.+++++.+.....+. ......++.+.+++
T Consensus 226 ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (341)
T cd08290 226 LNCVGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELI 300 (341)
T ss_pred EECcCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHH
Confidence 9999997788899999999999999863321 1223444567889999988765431 23334688889999
Q ss_pred HcCCceeeeehhc---ccccHHHHHHHHHcCCccceEEEEe
Q 024411 229 KEGKLVYVEDMAE---GLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 229 ~~g~l~~~~~~~~---~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.++.+.+....++ ++++++++++.+.+++..+|+|+++
T Consensus 301 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 301 REGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 9999988766677 9999999999999988899999864
No 46
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.1e-30 Score=217.67 Aligned_cols=247 Identities=22% Similarity=0.257 Sum_probs=209.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-------------------------------ccccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-------------------------------MTGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.+++|+|+++|++++.+++||+|+. .|+|++|+.++.+.++++ |++++
T Consensus 62 ~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~l-p~~~~ 140 (341)
T cd08297 62 HEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPI-PDGLS 140 (341)
T ss_pred cccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEEC-CCCCC
Confidence 4789999999999999999999985 378999999999999999 88854
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
.. +++.++..+.+||+++.. .++++++++||+|+++++|++++++|+.+|++|+++++++++.+.++ ++|.++++++
T Consensus 141 ~~-~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~ 217 (341)
T cd08297 141 FE-QAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDF 217 (341)
T ss_pred HH-HHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcC
Confidence 44 377889999999999866 48999999999999888999999999999999999999999999997 8999888888
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEe
Q 024411 133 KEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (268)
+.. ++...+.+.+++ ++|+++|+.+. ..+..++++++++|+++.+|.... .....+......+++++.+...
T Consensus 218 ~~~-~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 291 (341)
T cd08297 218 KKS-DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG-----GFIPLDPFDLVLRGITIVGSLV 291 (341)
T ss_pred CCc-cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC-----CCCCCCHHHHHhcccEEEEecc
Confidence 876 777888887766 89999997765 788899999999999999986431 1123344555678888877544
Q ss_pred cccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 211 LDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.. .+.++++++++.++.+++.+ ..+++++++++++.+.++...||+++++
T Consensus 292 ~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 292 GT-----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred CC-----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 33 57788999999999998755 5689999999999999999899999875
No 47
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=6.8e-31 Score=218.59 Aligned_cols=248 Identities=17% Similarity=0.241 Sum_probs=201.4
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSP 77 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~ 77 (268)
.+++|+|+++|++++.|++||+|+++ |+|++|++++.+.++++ |++++.. +++.+++++.+||+++....++
T Consensus 64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~ 141 (336)
T TIGR02817 64 WDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHK-PKSLSFA-EAAALPLTSITAWELLFDRLGI 141 (336)
T ss_pred eeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccC-CCCCCHH-HHhhhhHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999985 78999999999999999 8885544 4778999999999999888888
Q ss_pred CC-----CcEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCcc
Q 024411 78 KH-----GECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 78 ~~-----~~~vlI~ga~g~~G~~~i~l~~~~-g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
++ +++|||+|++|++|++++|+|+.+ |++|+++++++++.+.++ ++|+++++++.. ++...+++..++++|
T Consensus 142 ~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd 218 (336)
T TIGR02817 142 NDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVS 218 (336)
T ss_pred CCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCC
Confidence 77 999999999999999999999998 999999999999999998 899988888654 566777765434899
Q ss_pred EEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecc--c---ccch--HHHHHH
Q 024411 152 IYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD--H---YHLY--PKFLEM 223 (268)
Q Consensus 152 ~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~--~~~~~~ 223 (268)
+++|++++ ......+++++++|+++.++... ..+...+..+++++.+..... . .... ...+++
T Consensus 219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (336)
T TIGR02817 219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNR 289 (336)
T ss_pred EEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHH
Confidence 99999865 78899999999999999874311 122233344556666544321 1 1111 256888
Q ss_pred HHHHHHcCCceeeeehhcc---cccHHHHHHHHHcCCccceEEEE
Q 024411 224 IIPHIKEGKLVYVEDMAEG---LESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 224 ~~~~~~~g~l~~~~~~~~~---~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
+.+++.++.+++.+.+.++ ++++++|++.+.+++..||+++.
T Consensus 290 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 290 VARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 9999999999887666664 68999999999999888999875
No 48
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1e-30 Score=221.86 Aligned_cols=251 Identities=19% Similarity=0.244 Sum_probs=207.1
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec-------------------------------cccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM-------------------------------TGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.|++|+|+++|++++.+++||+|+.. |+|+||++++.+.++++ |++++
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~v-P~~l~ 161 (398)
T TIGR01751 83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPK-PKHLT 161 (398)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEEC-CCCCC
Confidence 45789999999999999999999763 78999999999999999 88854
Q ss_pred chhhhhhccchHHHHHHHhhh--hcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeee
Q 024411 53 LSYYTGILGMPGMTAYVGFYE--VCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF 130 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~--~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~ 130 (268)
.. +++.+...+.+||+++.. .+++.++++++|+|++|++|++++++++.+|++++++++++++.+.++ ++|++.++
T Consensus 162 ~~-~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g~~~~v 239 (398)
T TIGR01751 162 WE-EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELGAEAVI 239 (398)
T ss_pred HH-HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCCEEe
Confidence 44 367788899999999865 467899999999999999999999999999999999988999999998 79998888
Q ss_pred ecCCh---------------------hhHHHHHHHHCCC-CccEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCC
Q 024411 131 NYKEE---------------------ADLNAALKRYFPE-GIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDK 188 (268)
Q Consensus 131 ~~~~~---------------------~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 188 (268)
|++.. ..+...+.+.+++ ++|++|||+|...+..++++++++|+++.+|......
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~--- 316 (398)
T TIGR01751 240 DRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYN--- 316 (398)
T ss_pred cCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCC---
Confidence 76431 0245566677766 8999999999988899999999999999998754211
Q ss_pred CccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
...+...++.++.++.+..... .+.++++.+++.++.+.+.+..++++++++++++.+.+++..||+|+.+.
T Consensus 317 --~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 317 --HDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred --CCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 1223445556666666655433 34467888999999998888888999999999999999999999999763
No 49
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.6e-31 Score=222.47 Aligned_cols=240 Identities=20% Similarity=0.187 Sum_probs=187.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------------------------------cccceeEeecCCcceeecCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------------------------------TGWEEYSLITAPHLFKIQHTD 50 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~~~~~~~p~~ 50 (268)
.|++|+|+++|++ ++|++||+|++. |+|+||++++++.++++ |++
T Consensus 63 ~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~-P~~ 140 (355)
T cd08230 63 HEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKV-PPS 140 (355)
T ss_pred cccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEEC-CCC
Confidence 5789999999999 999999999752 67999999999999999 888
Q ss_pred CCchhhhhhccchHHHHHHHhhhh------cCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHH
Q 024411 51 VPLSYYTGILGMPGMTAYVGFYEV------CSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLK 121 (268)
Q Consensus 51 ~~~~~~~a~l~~~~~~a~~~l~~~------~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~---~~~~~~~~~ 121 (268)
+ + +++++..+..++++++... ..++++++|+|+|+ |++|++++|+|+.+|++|+++++ ++++.+.++
T Consensus 141 ~--~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~ 216 (355)
T cd08230 141 L--A-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE 216 (355)
T ss_pred C--C-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH
Confidence 4 4 4566667777666655332 22568999999996 99999999999999999999987 678999998
Q ss_pred HhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccc----hH
Q 024411 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN----LM 196 (268)
Q Consensus 122 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~ 196 (268)
++|++. +++.++ ++.+ .+ ..+++|++|||+|. ..+..+++.++++|+++.+|...+. .....+ ..
T Consensus 217 -~~Ga~~-v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~ 286 (355)
T cd08230 217 -ELGATY-VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELNR 286 (355)
T ss_pred -HcCCEE-ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhhh
Confidence 999986 455554 4433 21 12479999999997 6789999999999999999875431 011122 34
Q ss_pred HHHhcceeeeeEEecccccchHHHHHHHHHHHHcCC------ceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 197 YLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK------LVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.++.+++++.|+...+ .+.++++++++.++. +++.++++|+++++++||+.+.++. .|++++|
T Consensus 287 ~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 287 DLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred hHhhcCcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 5677999999876544 445777888887765 6667888999999999999987654 5999875
No 50
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.7e-31 Score=220.91 Aligned_cols=234 Identities=16% Similarity=0.154 Sum_probs=180.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------------------------cccceeEeecCCcceeecCCCCCchhh
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------------------------TGWEEYSLITAPHLFKIQHTDVPLSYY 56 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~ 56 (268)
-|++|+|+++|.+ .|++||||+.. |+|+||++++++.++++ |++ ++++
T Consensus 64 hE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v-P~~--l~~~ 138 (341)
T cd08237 64 HEGIGVVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKL-PDN--VDPE 138 (341)
T ss_pred ceeEEEEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEEC-CCC--CChH
Confidence 4678888887764 79999999752 77999999999999999 888 4445
Q ss_pred hhhccchHHHHHHHhhhh--cCCCCCcEEEEecCcchHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 57 TGILGMPGMTAYVGFYEV--CSPKHGECVFISAASGAVGQLVGQFAKL-LG-CYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 57 ~a~l~~~~~~a~~~l~~~--~~~~~~~~vlI~ga~g~~G~~~i~l~~~-~g-~~V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
.|++..+.+++++++... ..++++++|+|+|+ |++|++++|+++. .| .+|+++++++++.+.++ +.+.+..++
T Consensus 139 ~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~- 215 (341)
T cd08237 139 VAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID- 215 (341)
T ss_pred HhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh-
Confidence 566778999999998643 34688999999997 9999999999986 55 58999999999999988 655543221
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCh----hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeee
Q 024411 133 KEEADLNAALKRYFPE-GIDIYFENVGG----KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG 207 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (268)
++. .+ ++|++||++|+ ..+..++++++++|+++.+|...+ ...++...++.+++++.+
T Consensus 216 ----~~~-------~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g 278 (341)
T cd08237 216 ----DIP-------EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVG 278 (341)
T ss_pred ----hhh-------hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEE
Confidence 111 12 69999999994 468899999999999999986421 123445667889999998
Q ss_pred EEecccccchHHHHHHHHHHHHcC-----CceeeeehhcccccHHHHHHHHHcCC--ccceEEEEec
Q 024411 208 FIVLDHYHLYPKFLEMIIPHIKEG-----KLVYVEDMAEGLESAPAALIGLFSGQ--NVGKQVVAVA 267 (268)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g-----~l~~~~~~~~~~~~~~~a~~~~~~~~--~~gkvvi~~~ 267 (268)
+...+ .+.++++++++.++ .+++.++++|++++++++.+.+++.. ..||+|++++
T Consensus 279 ~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 279 SSRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred ecccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 76543 45688899999998 57778888999865555555444322 6799999875
No 51
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=9.2e-31 Score=217.21 Aligned_cols=248 Identities=24% Similarity=0.248 Sum_probs=200.0
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec-----------------------------------cccceeEeecCCcceeecC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM-----------------------------------TGWEEYSLITAPHLFKIQH 48 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~~~~~p 48 (268)
=|++|+|.++| .++.+++||||... |+|+||+++|.+.++.+.|
T Consensus 61 HE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~p 139 (350)
T COG1063 61 HEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLP 139 (350)
T ss_pred ccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCC
Confidence 36799999999 77889999999521 6899999999877666547
Q ss_pred CCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHh-cCC
Q 024411 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNK-FGF 126 (268)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~-~g~ 126 (268)
+++ +.+++++..++.+++++........++.+++|+|+ |++|++++++++.+|+ +|++++.++++++.++ + .++
T Consensus 140 d~~--~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~-~~~g~ 215 (350)
T COG1063 140 DGI--DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAK-EAGGA 215 (350)
T ss_pred CCC--ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-HhCCC
Confidence 763 54689999999999777544555566669999997 9999999999999998 8888899999999999 6 666
Q ss_pred CeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhccee
Q 024411 127 DEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (268)
Q Consensus 127 ~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (268)
+.+++...+ +....+.+.+.+ ++|++|||+|. ..+.++++.++++|+++.+|...+.. ...+...++.++++
T Consensus 216 ~~~~~~~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~-----~~~~~~~~~~kel~ 289 (350)
T COG1063 216 DVVVNPSED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGED-----IPLPAGLVVSKELT 289 (350)
T ss_pred eEeecCccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCcc-----CccCHHHHHhcccE
Confidence 666665554 566777788888 99999999998 67899999999999999999854321 14556788899999
Q ss_pred eeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCc-cceEEEEe
Q 024411 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQN-VGKQVVAV 266 (268)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 266 (268)
+.|+.... ....++.+++++++|++.+ .+++.++++++++|++.+.++.. ..|+++.+
T Consensus 290 l~gs~~~~----~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 290 LRGSLRPS----GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred EEeccCCC----CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 99984311 1456889999999999976 45667789999999999998554 55888764
No 52
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2.6e-31 Score=218.01 Aligned_cols=229 Identities=16% Similarity=0.179 Sum_probs=178.8
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe------------ccccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHh
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG------------MTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGF 71 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l 71 (268)
-|++|+|+++|+++ +|++||||+. .|+|+||++++++.++++ |++++ .+++. ..+..+||+++
T Consensus 64 hE~~G~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~i-p~~~~--~~~a~-~~~~~~a~~~~ 138 (308)
T TIGR01202 64 YESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRL-DPALG--PQGAL-LALAATARHAV 138 (308)
T ss_pred ceeEEEEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeC-CCCCC--HHHHh-hhHHHHHHHHH
Confidence 46799999999998 5999999985 489999999999999999 88744 33443 34578999999
Q ss_pred hhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCc
Q 024411 72 YEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGI 150 (268)
Q Consensus 72 ~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~ 150 (268)
.+ . ..++++++|+|+ |++|++++|+|+.+|++ |+++...+++.+.+. .. .++|+.+ . .++++
T Consensus 139 ~~-~-~~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~--------~~~g~ 201 (308)
T TIGR01202 139 AG-A-EVKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D--------PRRDY 201 (308)
T ss_pred Hh-c-ccCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c--------cCCCC
Confidence 55 2 346889999986 99999999999999997 555566666666554 32 3454432 1 12379
Q ss_pred cEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHH
Q 024411 151 DIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIK 229 (268)
Q Consensus 151 d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (268)
|++|||+|+ ..+..++++++++|+++.+|...+ ....++..++.+++++.++..+. .+.++++++++.
T Consensus 202 Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~ 270 (308)
T TIGR01202 202 RAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIE 270 (308)
T ss_pred CEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC------CcccccchhhhcceEEEEecccc-----hhHHHHHHHHHH
Confidence 999999998 578999999999999999987431 12234456677888888765543 567999999999
Q ss_pred cCCcee--eeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 230 EGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 230 ~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
+|++++ .+++.|+|+++++|++.+.++...+|++++
T Consensus 271 ~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 271 SGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 999976 577899999999999998877677899873
No 53
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=9.7e-31 Score=220.63 Aligned_cols=252 Identities=18% Similarity=0.185 Sum_probs=191.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe----------------------------------------ccccceeEeecCC--
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG----------------------------------------MTGWEEYSLITAP-- 41 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~-- 41 (268)
-|++|+|+++|++|++|++||||.. .|+|+||++++..
T Consensus 67 hE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~ 146 (393)
T TIGR02819 67 HEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADF 146 (393)
T ss_pred ceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhC
Confidence 4679999999999999999999954 1788999999974
Q ss_pred cceeecCCCCCch---hhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEE-EeCCHHHH
Q 024411 42 HLFKIQHTDVPLS---YYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVG-SAGSKDKV 117 (268)
Q Consensus 42 ~~~~~~p~~~~~~---~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~-~~~~~~~~ 117 (268)
.++++ |++++.. ..++++.+++.++|+++. ..+++++++|+|.|+ |++|++++|+|+.+|+++++ +++++++.
T Consensus 147 ~l~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 147 NLLKF-PDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred ceEEC-CCcccccccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 59999 7764321 125678889999999985 478999999999765 99999999999999997554 55678899
Q ss_pred HHHHHhcCCCeeeecC-ChhhHHHHHHHHCCC-CccEEEeCCChh---------------hHHhHHHhhhcCCEEEEEcc
Q 024411 118 DLLKNKFGFDEAFNYK-EEADLNAALKRYFPE-GIDIYFENVGGK---------------LLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 118 ~~~~~~~g~~~v~~~~-~~~~~~~~~~~~~~~-~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~ 180 (268)
+.++ ++|++. +++. .. ++.+.+.+.+++ ++|+++|++|.+ .+.++++.++++|+++.+|.
T Consensus 224 ~~a~-~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~ 300 (393)
T TIGR02819 224 AQAR-SFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGL 300 (393)
T ss_pred HHHH-HcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeee
Confidence 9999 899964 5443 33 677778887776 899999999974 78999999999999999998
Q ss_pred ccc-ccCCC------CccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eee-hhcccccHHHHH
Q 024411 181 ISQ-YNLDK------PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VED-MAEGLESAPAAL 250 (268)
Q Consensus 181 ~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~-~~~~~~~~~~a~ 250 (268)
... ..... ....+.......+++++.+... ...++..++++++.+|++.+ .++ ++|+|+++++||
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~ 375 (393)
T TIGR02819 301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGY 375 (393)
T ss_pred cCCcccccccccccccccccchHHhhccCceEEeccC-----ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHH
Confidence 531 11000 0112223344455566655221 11344567899999999864 455 689999999999
Q ss_pred HHHHcCCccceEEEEec
Q 024411 251 IGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 251 ~~~~~~~~~gkvvi~~~ 267 (268)
+.+.++. .+|+++.++
T Consensus 376 ~~~~~~~-~~Kvvi~~~ 391 (393)
T TIGR02819 376 AEFDAGA-AKKFVIDPH 391 (393)
T ss_pred HHHhhCC-ceEEEEeCC
Confidence 9998875 489999864
No 54
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2e-30 Score=216.10 Aligned_cols=244 Identities=22% Similarity=0.262 Sum_probs=204.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.+++|+|.++|+++..+++||+|+++ |+|++|++++.+.++++ |++++.
T Consensus 63 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-P~~ls~ 141 (340)
T cd05284 63 HENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKL-PRGLDP 141 (340)
T ss_pred cceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEEC-CCCCCH
Confidence 46789999999999999999999863 68999999999999999 888544
Q ss_pred hhhhhhccchHHHHHHHhhhh-cCCCCCcEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeee
Q 024411 54 SYYTGILGMPGMTAYVGFYEV-CSPKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFN 131 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~~~g~~~v~~ 131 (268)
. +++.++..+.+||+++... ..+.++++|||+|+ |++|++++++|+..| .+|+++++++++.+.++ ++|++++++
T Consensus 142 ~-~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~ 218 (340)
T cd05284 142 V-EAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLN 218 (340)
T ss_pred H-HhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEc
Confidence 3 3778999999999999776 46889999999995 779999999999999 79999999999999997 899988888
Q ss_pred cCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEE
Q 024411 132 YKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (268)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (268)
++. .+...+++.+++ ++|+++|++|+ ..+..++++++++|+++.+|.... ...+....+.+++++.+..
T Consensus 219 ~~~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~~ 289 (340)
T cd05284 219 ASD--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGSL 289 (340)
T ss_pred CCc--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEEe
Confidence 775 366777777766 89999999996 788999999999999999986431 1122334457888888766
Q ss_pred ecccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 210 VLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
... .+.++.+++++.++.+++.+ ..|+++++++|++.+++++..||+++.+
T Consensus 290 ~~~-----~~~~~~~~~~l~~g~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 290 WGT-----RAELVEVVALAESGKVKVEI-TKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred ccc-----HHHHHHHHHHHHhCCCCcce-EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 433 56788899999999988644 5789999999999999998889999763
No 55
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=2.1e-30 Score=217.98 Aligned_cols=249 Identities=23% Similarity=0.290 Sum_probs=208.2
Q ss_pred CccceEEEEecCCCCC---CCCCCeEEe----------------------------------------------------
Q 024411 4 ISGYGVAKVLDSENPE---FNKGDLVWG---------------------------------------------------- 28 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~---~~~Gd~V~~---------------------------------------------------- 28 (268)
.|++|+|+.+|+++++ |++||+|++
T Consensus 59 ~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (367)
T cd08263 59 HEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYS 138 (367)
T ss_pred cccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccccc
Confidence 4789999999999988 999999987
Q ss_pred ccccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-E
Q 024411 29 MTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-V 107 (268)
Q Consensus 29 ~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V 107 (268)
.|+|++|+.++.+.++++ |++++.. ++++++.++++||+++...+.+.++++++|+| +|++|++++++|+..|++ |
T Consensus 139 ~g~~~~~~~~~~~~~~~~-P~~is~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~v 215 (367)
T cd08263 139 MGGLAEYAVVPATALAPL-PESLDYT-ESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPI 215 (367)
T ss_pred CCcceeEEEechhhEEEC-CCCCCHH-HHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeE
Confidence 278999999999999999 9985544 47889999999999998888889999999996 599999999999999997 8
Q ss_pred EEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCChh-hHHhHHHhhhcCCEEEEEccccccc
Q 024411 108 VGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGGK-LLDAVLPNMKIRGRIAACGMISQYN 185 (268)
Q Consensus 108 ~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~ 185 (268)
++++.++++.+.++ ++|++.+++++.. ++...++...++ ++|+++|++++. ....++++++++|+++.++.....
T Consensus 216 i~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~- 292 (367)
T cd08263 216 IAVDVRDEKLAKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG- 292 (367)
T ss_pred EEEeCCHHHHHHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC-
Confidence 88888999999887 8999889988876 777788877766 899999999986 889999999999999999764311
Q ss_pred CCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceee--eehhcccccHHHHHHHHHcCCccceEE
Q 024411 186 LDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQV 263 (268)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvv 263 (268)
.....+...++.+++++.++.... ..+.++++.+++.++.+++. +...+++++++++++.+++++..||+|
T Consensus 293 ---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~ 365 (367)
T cd08263 293 ---ATAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAI 365 (367)
T ss_pred ---CccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceee
Confidence 112233444456888877743221 14678889999999999864 567899999999999999998889998
Q ss_pred EE
Q 024411 264 VA 265 (268)
Q Consensus 264 i~ 265 (268)
++
T Consensus 366 ~~ 367 (367)
T cd08263 366 VE 367 (367)
T ss_pred eC
Confidence 74
No 56
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=8.4e-31 Score=212.32 Aligned_cols=226 Identities=18% Similarity=0.210 Sum_probs=182.6
Q ss_pred CccceEEEEecCCCC------CCCCCCeEEe-------------------------------------ccccceeEeecC
Q 024411 4 ISGYGVAKVLDSENP------EFNKGDLVWG-------------------------------------MTGWEEYSLITA 40 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~------~~~~Gd~V~~-------------------------------------~g~~~~~~~v~~ 40 (268)
-|++|+|+++|++|+ ++++||||.. .|+|+||+++++
T Consensus 4 HE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~~ 83 (280)
T TIGR03366 4 HEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLPA 83 (280)
T ss_pred cccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEEecC
Confidence 478999999999999 8999999953 167999999999
Q ss_pred C-cceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHH
Q 024411 41 P-HLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVD 118 (268)
Q Consensus 41 ~-~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~ 118 (268)
+ .++++ |++++.. .++.+++.+.|||+++... ...++++|+|+|+ |++|++++|+|+.+|++ |+++++++++.+
T Consensus 84 ~~~~~~l-P~~~~~~-~aa~l~~~~~ta~~al~~~-~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~ 159 (280)
T TIGR03366 84 GTAIVPV-PDDLPDA-VAAPAGCATATVMAALEAA-GDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE 159 (280)
T ss_pred CCcEEEC-CCCCCHH-HhhHhhhHHHHHHHHHHhc-cCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 8 69999 8885544 3777888899999998554 5669999999987 99999999999999996 888888999999
Q ss_pred HHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchH
Q 024411 119 LLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLM 196 (268)
Q Consensus 119 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 196 (268)
.++ ++|++.+++... ..+.+++.+.+ ++|+++|++|. ..+..++++++++|+++.+|...+ ......+..
T Consensus 160 ~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----~~~~~i~~~ 231 (280)
T TIGR03366 160 LAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFP----GGPVALDPE 231 (280)
T ss_pred HHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCC----CCceeeCHH
Confidence 998 999988887643 34456666665 89999999997 678999999999999999986431 111234567
Q ss_pred HHHhcceeeeeEEecccccchHHHHHHHHHHHHcC--Cc--eeeeehhcccccH
Q 024411 197 YLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG--KL--VYVEDMAEGLESA 246 (268)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~l--~~~~~~~~~~~~~ 246 (268)
.++.+++++.|+..+. .+.++++++++.++ ++ ++.++++|+++++
T Consensus 232 ~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 232 QVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 7888999999876544 56788999999874 33 3567778888763
No 57
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.98 E-value=5.3e-30 Score=213.97 Aligned_cols=249 Identities=22% Similarity=0.272 Sum_probs=207.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe------------------------------ccccceeEeecCC--cceeecCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG------------------------------MTGWEEYSLITAP--HLFKIQHTDV 51 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~--~~~~~~p~~~ 51 (268)
.+++|+|+.+|++++.+++||+|++ .|+|++|++++.+ .++++ |+++
T Consensus 60 ~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~i-P~~~ 138 (345)
T cd08260 60 HEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRL-PDDV 138 (345)
T ss_pred cceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEEC-CCCC
Confidence 5789999999999999999999986 3789999999985 79999 9885
Q ss_pred CchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeee
Q 024411 52 PLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN 131 (268)
Q Consensus 52 ~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~ 131 (268)
+.. +++.++.++++||+++...+++.++++++|+| .|++|++++++|+..|++|+++++++++.+.++ ++|++++++
T Consensus 139 ~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~ 215 (345)
T cd08260 139 DFV-TAAGLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVN 215 (345)
T ss_pred CHH-HhhhhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEc
Confidence 544 37788889999999997788899999999999 599999999999999999999999999999998 899988988
Q ss_pred cCC-hhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEE
Q 024411 132 YKE-EADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (268)
Q Consensus 132 ~~~-~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (268)
++. . ++...+....++++|+++||+|+ ..+...+++++++|+++.+|....... ....++..++.+++++.+..
T Consensus 216 ~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 291 (345)
T cd08260 216 ASEVE-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEA---GVALPMDRVVARELEIVGSH 291 (345)
T ss_pred cccch-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCC---ccccCHHHHhhcccEEEeCC
Confidence 876 5 77777777665589999999995 788899999999999999987432110 02233445557788888765
Q ss_pred ecccccchHHHHHHHHHHHHcCCceee--eehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 210 VLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
... .+.++++.++++++.+.+. +...++++++++|++.+.+++..+|+|++
T Consensus 292 ~~~-----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 292 GMP-----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred cCC-----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 433 5678889999999998763 56788999999999999999989998864
No 58
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.98 E-value=6.3e-30 Score=212.83 Aligned_cols=244 Identities=18% Similarity=0.212 Sum_probs=202.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe------------------------------ccccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG------------------------------MTGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.+++|+|+++|++++.+++||+|++ .|+|++|+.++++ ++++ |++++.
T Consensus 59 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~-p~~~~~ 136 (337)
T cd08261 59 HELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLV-PEGLSL 136 (337)
T ss_pred cccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEEC-CCCCCH
Confidence 5678999999999999999999986 3789999999999 9999 998544
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecC
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~ 133 (268)
. +++.+ ..++++++++ ...++.++++|||+| +|++|++++|+|+.+|++|+++.+++++.+.++ +++++++++++
T Consensus 137 ~-~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~ 211 (337)
T cd08261 137 D-QAALV-EPLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVG 211 (337)
T ss_pred H-Hhhhh-chHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCc
Confidence 3 24444 6778899888 678899999999997 589999999999999999999988999999997 89998999888
Q ss_pred ChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEec
Q 024411 134 EEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (268)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (268)
.. ++...+.+.+++ ++|+++||+|+ ..+..++++++++|+++.++.... ....+...+..+++++.+...
T Consensus 212 ~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~~~~~~~~~~~- 283 (337)
T cd08261 212 DE-DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHKKELTILGSRN- 283 (337)
T ss_pred cc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHhCCCEEEEecc-
Confidence 76 788888887776 89999999987 788899999999999999876431 112233445567777766531
Q ss_pred ccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcC-CccceEEEEe
Q 024411 212 DHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSG-QNVGKQVVAV 266 (268)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi~~ 266 (268)
...+.++++.+++.++.+++ .+..++++++++++++.+.++ ...+|+|+++
T Consensus 284 ----~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 284 ----ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred ----CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 23567888999999999987 677789999999999999988 4778999875
No 59
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=5.3e-30 Score=210.41 Aligned_cols=244 Identities=23% Similarity=0.280 Sum_probs=201.8
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.+++|+|+++|++++.|++||+|+++ |+|++|+.++.+.++++ |++++.. +++++++.+.+||+++...... ++
T Consensus 57 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~ta~~~~~~~~~~-~~ 133 (305)
T cd08270 57 WDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVL-PDGVSFA-QAATLPVAGVTALRALRRGGPL-LG 133 (305)
T ss_pred ceeEEEEEEeCCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEEC-CCCCCHH-HHHHhHhHHHHHHHHHHHhCCC-CC
Confidence 57899999999999999999999986 79999999999999999 8885554 4778999999999999776655 59
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCChh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGK 160 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 160 (268)
++++|+|++|++|++++++++..|++|+.+++++++.+.++ ++|++.+++... . ..++++|+++|++|+.
T Consensus 134 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~~ 203 (305)
T cd08270 134 RRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGGP 203 (305)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCCcH
Confidence 99999999999999999999999999999999999999998 799875553321 1 1223799999999998
Q ss_pred hHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHh--cceeeeeEEecccccchHHHHHHHHHHHHcCCceeeee
Q 024411 161 LLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS--KRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVED 238 (268)
Q Consensus 161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 238 (268)
.+..++++++++|+++.+|.... .....+...+.. ++.++.++.... +....+.++.+.+++.++++++.+.
T Consensus 204 ~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~ 277 (305)
T cd08270 204 QLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIG 277 (305)
T ss_pred HHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceec
Confidence 88999999999999999986431 112223333333 578888877653 2334567888999999999998777
Q ss_pred hhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 239 MAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 239 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
++++++++++|++.+.+++..||+++++
T Consensus 278 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 278 WRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred cEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8899999999999999988889999874
No 60
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.98 E-value=7.4e-30 Score=211.77 Aligned_cols=256 Identities=35% Similarity=0.581 Sum_probs=210.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec--cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM--TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGE 81 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~ 81 (268)
.+++|+|..+|++++.+++||+|++. |+|++|+.++.+.++++ |++ .. +++.+++++.+||+++....++.+++
T Consensus 66 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~ 141 (329)
T cd08250 66 FEGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARHAVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGE 141 (329)
T ss_pred ceeEEEEEEECCCCCCCCCCCEEEEecCcceeEEEEechHHeEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCC
Confidence 46799999999999999999999986 89999999999999999 876 33 47789999999999998888899999
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCChhh
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKL 161 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 161 (268)
+++|+|++|++|++++++++..|++|+++++++++.+.++ ++|++.+++.+.. ++...+....++++|+++|++|+..
T Consensus 142 ~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~ 219 (329)
T cd08250 142 TVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEM 219 (329)
T ss_pred EEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHH
Confidence 9999999999999999999999999999999999999997 8998888877765 6666676655458999999999988
Q ss_pred HHhHHHhhhcCCEEEEEcccccccCCC-C---ccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceeee
Q 024411 162 LDAVLPNMKIRGRIAACGMISQYNLDK-P---EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVE 237 (268)
Q Consensus 162 ~~~~~~~l~~~G~~v~~g~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 237 (268)
+..++++++++|+++.+|......... . .........+.+++++.++....+.....+.+.++.+++.++.+++.+
T Consensus 220 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 299 (329)
T cd08250 220 FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEV 299 (329)
T ss_pred HHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeE
Confidence 899999999999999998754211000 0 001112345678888888876543333466788899999999998743
Q ss_pred --ehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 238 --DMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 238 --~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
...++++++++|++.+.+++..+|++++
T Consensus 300 ~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 300 DPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred CCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 3458999999999999998888898874
No 61
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.98 E-value=5.1e-30 Score=214.45 Aligned_cols=246 Identities=20% Similarity=0.242 Sum_probs=204.8
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
-+++|+|.++|++++.+++||+|+++ |++++|+.++.+.++++ |++++.
T Consensus 72 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~s~ 150 (350)
T cd08240 72 HEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVD-PGGLDP 150 (350)
T ss_pred cceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeC-CCCCCH
Confidence 36789999999999999999999864 78999999999999999 888554
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
. .++.+.+.+.+||+++.....+.++++|+|+| +|++|++++|+|+..|+ +|+++++++++.+.+. ++|++.+++.
T Consensus 151 ~-~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 227 (350)
T cd08240 151 A-LAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVVNG 227 (350)
T ss_pred H-HeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEecC
Confidence 4 36788899999999998877777899999996 59999999999999999 7999998999999997 8999888887
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEec
Q 024411 133 KEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (268)
+.. .+...+.+..++++|+++|++|. ..+..++++|+++|+++.+|..... ...+......+++++.+....
T Consensus 228 ~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~ 300 (350)
T cd08240 228 SDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYVG 300 (350)
T ss_pred CCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEcccC
Confidence 765 66667777655589999999985 7889999999999999999864321 112222334477777776654
Q ss_pred ccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
. .+.+.++++++.++.+++.+...++++++++|++.+.+++..||++++
T Consensus 301 ~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 301 S-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred C-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 4 467888999999999987766789999999999999998888999885
No 62
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.98 E-value=1.2e-29 Score=210.25 Aligned_cols=253 Identities=22% Similarity=0.217 Sum_probs=202.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec----cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM----TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKH 79 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~ 79 (268)
.+++|+|..+|++++.+++||+|+.+ |+|++|+.++.+.++++ |++++.. .++.+++...+||+++...+.+++
T Consensus 63 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~ 140 (327)
T PRK10754 63 TEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAIL-PDAISFE-QAAASFLKGLTVYYLLRKTYEIKP 140 (327)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeC-CCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCC
Confidence 46789999999999999999999864 89999999999999999 8885444 366778899999999988888999
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVG 158 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g 158 (268)
+++++|+|++|.+|++++++++..|++|+.+++++++.+.++ ++|++++++.... ++.+.+++.+++ ++|+++||+|
T Consensus 141 g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~ 218 (327)
T PRK10754 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVG 218 (327)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCc
Confidence 999999999999999999999999999999999999999997 8999888887775 788888888876 8999999999
Q ss_pred hhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhccee-eeeEEeccc---ccchHHHHHHHHHHHHcCCce
Q 024411 159 GKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR-MEGFIVLDH---YHLYPKFLEMIIPHIKEGKLV 234 (268)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~ 234 (268)
+..+...+++++++|+++.+|..... ........+..++.. ........+ +....+.++++++++.+|.++
T Consensus 219 ~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 293 (327)
T PRK10754 219 KDTWEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIK 293 (327)
T ss_pred HHHHHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCee
Confidence 98888999999999999999874311 111122222112211 111111111 112344567789999999998
Q ss_pred ee--eehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 235 YV--EDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 235 ~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
+. ....|++++++++++.+.+++..+|+|+.
T Consensus 294 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 294 VDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred eecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 64 35789999999999999999999999985
No 63
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.98 E-value=1.1e-29 Score=214.60 Aligned_cols=248 Identities=22% Similarity=0.237 Sum_probs=202.1
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe--------------------------------------------------ccccc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG--------------------------------------------------MTGWE 33 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~--------------------------------------------------~g~~~ 33 (268)
.|++|+|+++|++++++++||+|+. .|+|+
T Consensus 60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 139 (386)
T cd08283 60 HEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQA 139 (386)
T ss_pred ccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeE
Confidence 5789999999999999999999975 26889
Q ss_pred eeEeecCC--cceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024411 34 EYSLITAP--HLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS 110 (268)
Q Consensus 34 ~~~~v~~~--~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~ 110 (268)
||++++.+ .++++ |++++.. +++.++...++||+++ ...++.++++|+|+|+ |++|++++++|+..|+ +|+++
T Consensus 140 ~~~~v~~~~~~~~~l-p~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~ 215 (386)
T cd08283 140 EYVRVPFADVGPFKI-PDDLSDE-KALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAI 215 (386)
T ss_pred EEEEcccccCeEEEC-CCCCCHH-HHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Confidence 99999988 78999 8885443 3778899999999999 7788999999999975 9999999999999998 69999
Q ss_pred eCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCChh----------------------hHHhHHH
Q 024411 111 AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGGK----------------------LLDAVLP 167 (268)
Q Consensus 111 ~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~----------------------~~~~~~~ 167 (268)
++++++.+.++ +++...++++...+++.+.+++.+.+ ++|+++|++|++ .+..+++
T Consensus 216 ~~~~~~~~~~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (386)
T cd08283 216 DRVPERLEMAR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQ 294 (386)
T ss_pred cCCHHHHHHHH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHH
Confidence 99999999998 67444677776541377788887776 899999999752 5788999
Q ss_pred hhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceee--eehhccccc
Q 024411 168 NMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLES 245 (268)
Q Consensus 168 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~ 245 (268)
+++++|+++.+|..... ....+....+.+++++.+.... ..+.++.+.+++.++++.+. +...+++++
T Consensus 295 ~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~ 364 (386)
T cd08283 295 AVRKGGTVSIIGVYGGT-----VNKFPIGAAMNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPLED 364 (386)
T ss_pred HhccCCEEEEEcCCCCC-----cCccCHHHHHhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecHHH
Confidence 99999999999864321 1223344567888888886532 25678889999999999863 557889999
Q ss_pred HHHHHHHHHcCC-ccceEEEEe
Q 024411 246 APAALIGLFSGQ-NVGKQVVAV 266 (268)
Q Consensus 246 ~~~a~~~~~~~~-~~gkvvi~~ 266 (268)
+++|++.+.++. ..+|+++++
T Consensus 365 ~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 365 APEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred HHHHHHHHHhCCCCeEEEEecC
Confidence 999999998876 568999863
No 64
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=1.1e-29 Score=212.38 Aligned_cols=249 Identities=19% Similarity=0.214 Sum_probs=198.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe---------------------------------ccccceeEeecCC--cceeecC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG---------------------------------MTGWEEYSLITAP--HLFKIQH 48 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~~p 48 (268)
.|++|+|+++|++++++++||+|++ .|+|+||++++.+ .++++ |
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~l-P 137 (351)
T cd08285 59 HEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPL-P 137 (351)
T ss_pred cceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEEC-C
Confidence 4789999999999999999999986 2789999999975 79999 8
Q ss_pred CCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC
Q 024411 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD 127 (268)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~ 127 (268)
++++.. +++.++.++.+||+++ ..+.++++++|||+|+ |++|++++|+|+..|+ .|+++++++++.+.++ ++|++
T Consensus 138 ~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~ 213 (351)
T cd08285 138 DGLTDE-QAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGAT 213 (351)
T ss_pred CCCCHH-HhhhhccchhhHHHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCc
Confidence 885443 3677888999999996 5678999999999974 9999999999999999 5888888888999888 89999
Q ss_pred eeeecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccc--hHHHHhcce
Q 024411 128 EAFNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN--LMYLVSKRL 203 (268)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~ 203 (268)
+++++... ++...+...+.+ ++|+++||+|+ ..+..++++++++|+++.+|..... .....+ ......+..
T Consensus 214 ~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~ 288 (351)
T cd08285 214 DIVDYKNG-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED----DYLPIPREEWGVGMGHK 288 (351)
T ss_pred eEecCCCC-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC----ceeecChhhhhhhcccc
Confidence 89988776 777788877766 89999999997 6889999999999999999874421 000111 111122344
Q ss_pred eeeeEEecccccchHHHHHHHHHHHHcCCcee---eeehhcccccHHHHHHHHHcCCc-cceEEEEe
Q 024411 204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY---VEDMAEGLESAPAALIGLFSGQN-VGKQVVAV 266 (268)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~---~~~~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 266 (268)
++.+.... ...+.++++++++.+|++++ .+...++++++++|++.+.+++. ..|+++++
T Consensus 289 ~i~~~~~~----~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 289 TINGGLCP----GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred EEEEeecC----CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 44432221 12466888999999999987 44557899999999999998774 68999864
No 65
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=8.8e-30 Score=210.36 Aligned_cols=249 Identities=21% Similarity=0.257 Sum_probs=202.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhh
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV 74 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~ 74 (268)
.+++|+|+++|+ ..+++||+|+++ |+|++|+.++.+.++++ |++++.. +++++++++.+||+++...
T Consensus 62 ~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~ 137 (320)
T cd08243 62 IEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAI-DSDLSWA-ELAALPETYYTAWGSLFRS 137 (320)
T ss_pred ceeEEEEEEecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeC-CCCCCHH-HHHhcchHHHHHHHHHHHh
Confidence 478999999995 579999999986 78999999999999999 8885443 3788999999999999888
Q ss_pred cCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEE
Q 024411 75 CSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYF 154 (268)
Q Consensus 75 ~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~ 154 (268)
..+.++++|+|+|++|++|++++|+|+..|++|+++++++++.+.+. ++|++++++. .. ++...+++. ++++|+++
T Consensus 138 ~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~vl 213 (320)
T cd08243 138 LGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKVL 213 (320)
T ss_pred cCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEEE
Confidence 88999999999999999999999999999999999999999999997 8999877654 33 677777777 44899999
Q ss_pred eCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCce
Q 024411 155 ENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV 234 (268)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 234 (268)
||+|+..+...+++++++|+++.+|...+....... .......+.+++++.+..... .....++.+.+++.++.++
T Consensus 214 ~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 289 (320)
T cd08243 214 ELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTLEDF-NPMDDIPSGVNLTLTGSSSGD---VPQTPLQELFDFVAAGHLD 289 (320)
T ss_pred ECCChHHHHHHHHHhccCCEEEEEccCCCCcccCCc-chhhhhhhccceEEEecchhh---hhHHHHHHHHHHHHCCcee
Confidence 999998889999999999999999864321100000 011111235667766655432 2245688889999999998
Q ss_pred eeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
+.+...++++++++|++.+.++...+|+++
T Consensus 290 ~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 290 IPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred cccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 877778999999999999998888888875
No 66
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.97 E-value=1.2e-29 Score=213.17 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=204.7
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe----------------------------------------------------ccc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG----------------------------------------------------MTG 31 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~----------------------------------------------------~g~ 31 (268)
.|++|+|.++|++++++++||+|++ .|+
T Consensus 61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (365)
T cd08278 61 HEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSS 140 (365)
T ss_pred cceeEEEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccc
Confidence 4789999999999999999999983 278
Q ss_pred cceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024411 32 WEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS 110 (268)
Q Consensus 32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~ 110 (268)
|++|++++++.++++ |++++.. .++.+++++.+|+.++.....++++++|+|+|+ |++|++++|+|+..|+ .++++
T Consensus 141 ~~~y~~v~~~~~~~i-P~~~s~~-~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~ 217 (365)
T cd08278 141 FATYAVVHERNVVKV-DKDVPLE-LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAV 217 (365)
T ss_pred eeeEEEecchhEEEC-CCCCCHH-HhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999999999 9885544 377899999999999888888999999999975 9999999999999999 58888
Q ss_pred eCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCC
Q 024411 111 AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKP 189 (268)
Q Consensus 111 ~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 189 (268)
++++++.+.++ ++|++.+++++.. ++.+.+.+.+++++|+++||+|. ..+..++++++++|+++.+|.... ..
T Consensus 218 ~~~~~k~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~ 291 (365)
T cd08278 218 DIVDSRLELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPP----GA 291 (365)
T ss_pred eCCHHHHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCC----CC
Confidence 88999999888 8999888888775 77778887773389999999996 788999999999999999987421 11
Q ss_pred ccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee-eeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 190 EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY-VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~-~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
....+...++.+++++.++..... ...+.++++++++.++.+++ .+...++++++++|++.+.+++.. |+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~ 364 (365)
T cd08278 292 EVTLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVL 364 (365)
T ss_pred ccccCHHHHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEE
Confidence 223445555578888887765332 12567788899999998854 233578999999999999887654 7776
No 67
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.97 E-value=1.7e-29 Score=210.33 Aligned_cols=245 Identities=23% Similarity=0.284 Sum_probs=201.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-------------------------------ccccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-------------------------------MTGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.+++|+|..+|++++.|++||+|++ .|+++||+.++.+.++++ |++++
T Consensus 59 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~ 137 (338)
T PRK09422 59 HEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKV-PEGLD 137 (338)
T ss_pred cccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeC-CCCCC
Confidence 4789999999999999999999985 378999999999999999 88855
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHhcCCCeeee
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKVDLLKNKFGFDEAFN 131 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~-~g~~V~~~~~~~~~~~~~~~~~g~~~v~~ 131 (268)
.. ++++++..+.|||+++ ..+.++++++|||+| .|++|++++++++. .|++|+++++++++.+.++ ++|++.+++
T Consensus 138 ~~-~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~ 213 (338)
T PRK09422 138 PA-QASSITCAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTIN 213 (338)
T ss_pred HH-HeehhhcchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEec
Confidence 44 3778899999999998 667899999999999 59999999999998 4999999999999999997 899988888
Q ss_pred cCC-hhhHHHHHHHHCCCCcc-EEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEE
Q 024411 132 YKE-EADLNAALKRYFPEGID-IYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (268)
Q Consensus 132 ~~~-~~~~~~~~~~~~~~~~d-~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (268)
++. . ++.+.+++.++ ++| +++++.++..+..++++++++|+++.+|.... ....+......+..++.++.
T Consensus 214 ~~~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~ 285 (338)
T PRK09422 214 SKRVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGSL 285 (338)
T ss_pred ccccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEec
Confidence 754 4 66677777665 688 45555556889999999999999999986421 11224445556777776544
Q ss_pred ecccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 210 VLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
... .+.++++.+++.+|.+.+.+. .++++++++|++.+.++...||+++++.
T Consensus 286 ~~~-----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 286 VGT-----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred CCC-----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 322 567888999999999877654 5799999999999999999999999875
No 68
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.97 E-value=2.1e-29 Score=209.83 Aligned_cols=245 Identities=24% Similarity=0.318 Sum_probs=205.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe------------------------------ccccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG------------------------------MTGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.+++|+|..+|++++.+++||+|+. .|+|++|++++.+.++++ |++++.
T Consensus 62 ~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~ 140 (338)
T cd08254 62 HEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPV-PDGVPF 140 (338)
T ss_pred ccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEEC-CCCCCH
Confidence 4678999999999999999999986 278999999999999999 888544
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecC
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~ 133 (268)
. .++.++.++++||+++.....+.++++|||.| +|++|++++++|+..|++|+++++++++.+.++ ++|.+++++..
T Consensus 141 ~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~ 217 (338)
T cd08254 141 A-QAAVATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSL 217 (338)
T ss_pred H-HhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCC
Confidence 4 37788999999999998888899999999986 599999999999999999999999999999998 89988888777
Q ss_pred ChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEec
Q 024411 134 EEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (268)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (268)
+. .....+ ...++ ++|+++||+|. ..+..++++++++|+++.+|.... ....+...++.++.++.++...
T Consensus 218 ~~-~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~ 289 (338)
T cd08254 218 DD-SPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIARELRIIGSFGG 289 (338)
T ss_pred Cc-CHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhhCccEEEEeccC
Confidence 64 555555 44444 89999999986 688999999999999999976431 1123345667788877775443
Q ss_pred ccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
. .+.++.+.+++.++.+++. ...+++++++++++.+.+++..+|+++++
T Consensus 290 ~-----~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 T-----PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred C-----HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 2 5678889999999999876 56889999999999999999999999874
No 69
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.97 E-value=1.1e-29 Score=212.34 Aligned_cols=247 Identities=22% Similarity=0.208 Sum_probs=201.7
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe---------------------------------ccccceeEeecCC--cceeecC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG---------------------------------MTGWEEYSLITAP--HLFKIQH 48 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~~p 48 (268)
.+++|+|+++|++++++++||+|++ .|+|++|++++.+ .++++ |
T Consensus 60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-P 138 (347)
T cd05278 60 HEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKI-P 138 (347)
T ss_pred cceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEEC-C
Confidence 4679999999999999999999986 2789999999998 89999 8
Q ss_pred CCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC
Q 024411 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD 127 (268)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~ 127 (268)
++++.. +++.++.++.+||+++ ...+++++++|||.|+ |++|++++|+|+.+|+ +++++.+++++.+.++ ++|.+
T Consensus 139 ~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~ 214 (347)
T cd05278 139 DGLPDE-DALMLSDILPTGFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGAT 214 (347)
T ss_pred CCCCHH-HHhhhcchhhheeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCc
Confidence 885443 3778889999999998 6678999999999875 9999999999999997 8888888888888888 89988
Q ss_pred eeeecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceee
Q 024411 128 EAFNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205 (268)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (268)
.+++++.. ++...++..+++ ++|+++|++|+ ..+..++++++++|+++.+|...+. .........+.+++++
T Consensus 215 ~vi~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~ 288 (347)
T cd05278 215 DIINPKNG-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWFGKNLTF 288 (347)
T ss_pred EEEcCCcc-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhhhceeEE
Confidence 88888876 777888877765 89999999998 7889999999999999999854321 1001112334667776
Q ss_pred eeEEecccccchHHHHHHHHHHHHcCCceee--eehhcccccHHHHHHHHHcCCc-cceEEEEe
Q 024411 206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQN-VGKQVVAV 266 (268)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 266 (268)
.+..... .+.++++.+++.++.+++. +...++++++++|++.+.+++. .+|+|+++
T Consensus 289 ~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 289 KTGLVPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred EeeccCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 6644322 5678899999999999863 5577899999999999988776 68998763
No 70
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.97 E-value=3.1e-29 Score=206.78 Aligned_cols=254 Identities=26% Similarity=0.371 Sum_probs=211.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.+++|+|..+|+++.++++||+|+++ |++++|+.++.+.++++ |++++.. ++++++....++++++....++.++
T Consensus 60 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~g 137 (320)
T cd05286 60 VEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKL-PDGISDE-TAAALLLQGLTAHYLLRETYPVKPG 137 (320)
T ss_pred cceeEEEEEECCCCCCCCCCCEEEEecCCCceeEEEEecHHHceeC-CCCCCHH-HHhhccchHHHHHHHHHHhcCCCCC
Confidence 46789999999999999999999985 79999999999999999 8885444 3677889999999999888889999
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG 159 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~ 159 (268)
++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++++++.... ++...+...+.+ ++|+++||+++
T Consensus 138 ~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~ 215 (320)
T cd05286 138 DTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGK 215 (320)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCc
Confidence 99999999999999999999999999999999999999997 8999888877765 777888887766 89999999999
Q ss_pred hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc---ccchHHHHHHHHHHHHcCCceee
Q 024411 160 KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKLVYV 236 (268)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~~~ 236 (268)
.....++++++++|+++.+|.... .....+...+..+++++.+.....+ +....+.+.++.+++.++.+.+.
T Consensus 216 ~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 290 (320)
T cd05286 216 DTFEGSLDSLRPRGTLVSFGNASG-----PVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE 290 (320)
T ss_pred HhHHHHHHhhccCcEEEEEecCCC-----CCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc
Confidence 888899999999999999986432 1112233333477888876554332 22344567788899999998877
Q ss_pred eehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 237 EDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 237 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
....|++++++++++.+.++...+|+++.+
T Consensus 291 ~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 291 IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 767899999999999999988889999863
No 71
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.97 E-value=2.2e-29 Score=210.15 Aligned_cols=245 Identities=21% Similarity=0.229 Sum_probs=200.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCc-----ceeecC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPH-----LFKIQH 48 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~-----~~~~~p 48 (268)
.+++|+|+++|++++.+++||+|+++ |+|++|++++.+. ++++ |
T Consensus 59 ~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l-P 137 (343)
T cd08235 59 HEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL-P 137 (343)
T ss_pred cceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC-C
Confidence 46899999999999999999999974 7899999999998 9999 9
Q ss_pred CCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCC
Q 024411 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFD 127 (268)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~ 127 (268)
++++.. +++ +..++.+||+++... .+.++++|+|+| +|++|++++|+|+..|++ |+++.+++++.+.+. ++|.+
T Consensus 138 ~~~~~~-~aa-~~~~~~~a~~~l~~~-~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~ 212 (343)
T cd08235 138 DNVSFE-EAA-LVEPLACCINAQRKA-GIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGAD 212 (343)
T ss_pred CCCCHH-HHH-hhhHHHHHHHHHHhc-CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCc
Confidence 884443 244 447889999999654 899999999997 599999999999999998 888888999999887 89998
Q ss_pred eeeecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceee
Q 024411 128 EAFNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205 (268)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (268)
+++++++. ++.+.+++.+++ ++|+++||+++ ..+...+++++++|+++.++..... .....+......+++.+
T Consensus 213 ~~~~~~~~-~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~l 287 (343)
T cd08235 213 YTIDAAEE-DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKG----STVNIDPNLIHYREITI 287 (343)
T ss_pred EEecCCcc-CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCC----CCcccCHHHHhhCceEE
Confidence 88888876 788888887776 89999999997 5888999999999999998763321 11222334555677777
Q ss_pred eeEEecccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
.+..... .+.++++.+++.++.++ +.+...+++++++++++.+.+++ .+|+|+.
T Consensus 288 ~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 288 TGSYAAS-----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred EEEecCC-----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 6655433 56788889999999986 34556889999999999999988 8999873
No 72
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=2.3e-29 Score=209.95 Aligned_cols=243 Identities=19% Similarity=0.214 Sum_probs=196.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-------------------------------ccccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-------------------------------MTGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.+++|+|+++|+++++|++||+|++ .|+|++|++++++.++++ |++++
T Consensus 60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~~ 138 (343)
T cd05285 60 HESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKL-PDNVS 138 (343)
T ss_pred cceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEEC-cCCCC
Confidence 4789999999999999999999985 378999999999999999 98844
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeee
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFN 131 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~ 131 (268)
.. +++.+ .++.+|++++ ..+.++++++++|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|++++++
T Consensus 139 ~~-~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~ 213 (343)
T cd05285 139 LE-EGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVN 213 (343)
T ss_pred HH-Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEec
Confidence 43 24444 6788999997 7789999999999875 89999999999999997 899988889999887 899998888
Q ss_pred cCChhhH---HHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeee
Q 024411 132 YKEEADL---NAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRME 206 (268)
Q Consensus 132 ~~~~~~~---~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (268)
++.. ++ .+.+.+.+++ ++|+++||.|+ ..+...+++++++|+++.+|..... ...++.....+++++.
T Consensus 214 ~~~~-~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~ 286 (343)
T cd05285 214 VRTE-DTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE------VTLPLSAASLREIDIR 286 (343)
T ss_pred cccc-cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------CccCHHHHhhCCcEEE
Confidence 8765 53 6777777776 89999999998 4889999999999999999863311 1223334556666666
Q ss_pred eEEecccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCC-ccceEEEE
Q 024411 207 GFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQ-NVGKQVVA 265 (268)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvi~ 265 (268)
++... .+.++++++++.++.++ +.+.++++++++++|++.+.+++ ..+|++|.
T Consensus 287 ~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 287 GVFRY------ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred EeccC------hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence 65432 25678888999999865 44567889999999999999875 45899883
No 73
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.97 E-value=3.6e-29 Score=208.88 Aligned_cols=244 Identities=20% Similarity=0.223 Sum_probs=200.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec----------------------------------cccceeEeecCC--cceeec
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM----------------------------------TGWEEYSLITAP--HLFKIQ 47 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~----------------------------------g~~~~~~~v~~~--~~~~~~ 47 (268)
.|++|+|.++|++++.+++||+|++. |+|++|++++.+ .++++
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~- 137 (344)
T cd08284 59 HEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKL- 137 (344)
T ss_pred cceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEEC-
Confidence 46899999999999999999999872 789999999975 89999
Q ss_pred CCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC
Q 024411 48 HTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF 126 (268)
Q Consensus 48 p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~ 126 (268)
|++++.. +++.+++.++|||+++.. ..+.++++|+|+| +|++|++++|+|+..|+ +|+++++++++.+.+. ++|+
T Consensus 138 p~~l~~~-~a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~ 213 (344)
T cd08284 138 PDGLSDE-AALLLGDILPTGYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGA 213 (344)
T ss_pred CCCCCHH-HhhhhcCchHHHHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCC
Confidence 8885444 377889999999999965 7889999999997 59999999999999997 8999988888888888 8887
Q ss_pred CeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhccee
Q 024411 127 DEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (268)
Q Consensus 127 ~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (268)
. .++.+.. ++...+.+.+++ ++|+++|++|+ ..+..++++++++|+++.+|..... .........+.++++
T Consensus 214 ~-~~~~~~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~ 286 (344)
T cd08284 214 E-PINFEDA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAYNKNLT 286 (344)
T ss_pred e-EEecCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHhhcCcE
Confidence 5 4666655 677788887766 89999999996 7889999999999999999874321 112334556778887
Q ss_pred eeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
+.+... ...+.++++++++.++.+++ .+.+++++++++++++.+.+++. +|+|++
T Consensus 287 ~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 287 LRFGRC-----PVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred EEEecC-----CcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 765421 23667889999999999875 35678899999999999988777 999985
No 74
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=3e-29 Score=209.11 Aligned_cols=244 Identities=19% Similarity=0.215 Sum_probs=193.2
Q ss_pred CccceEEEEecCCCCC-CCCCCeEEec--------------------cccceeEeecCCcceeecCCCCCchhhhhhccc
Q 024411 4 ISGYGVAKVLDSENPE-FNKGDLVWGM--------------------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGM 62 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~-~~~Gd~V~~~--------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~ 62 (268)
.+++|+|.++|+++++ |++||+|+++ |+|+||++++.+.++++ |++++. +.++++.
T Consensus 69 ~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~s~--~~a~~~~ 145 (341)
T cd08262 69 HEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRV-PDGLSM--EDAALTE 145 (341)
T ss_pred cceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEEC-CCCCCH--HHhhhhh
Confidence 4678999999999997 9999999974 78999999999999999 888444 3445778
Q ss_pred hHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHH-
Q 024411 63 PGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNA- 140 (268)
Q Consensus 63 ~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~- 140 (268)
++++||+++ ..++++++++|||+|+ |++|++++|+++.+|++ ++++++++++.+.++ ++|++++++++.. +...
T Consensus 146 ~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~ 221 (341)
T cd08262 146 PLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SPFAA 221 (341)
T ss_pred hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CHHHH
Confidence 889999996 6788999999999975 99999999999999996 666667888888888 8998888887653 2211
Q ss_pred --HHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccc
Q 024411 141 --ALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHL 216 (268)
Q Consensus 141 --~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (268)
.+....++ ++|+++|++|+ ..+..++++++++|+++.+|..... ........+.+++++.+.....
T Consensus 222 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~---- 291 (341)
T cd08262 222 WAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES------DNIEPALAIRKELTLQFSLGYT---- 291 (341)
T ss_pred HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC------CccCHHHHhhcceEEEEEeccc----
Confidence 23444444 89999999998 5788899999999999999874211 1111222245666666544332
Q ss_pred hHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 217 YPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 217 ~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
.+.++++.+++.+|.+.+ .+.+.+++++++++++.+.+++..+|+|++
T Consensus 292 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 292 -PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred -HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 457888999999999875 346789999999999999999989999874
No 75
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.97 E-value=5.5e-29 Score=207.84 Aligned_cols=246 Identities=21% Similarity=0.182 Sum_probs=202.0
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec-------------------------------cccceeEeecCC--cceeecCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM-------------------------------TGWEEYSLITAP--HLFKIQHTD 50 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~--~~~~~~p~~ 50 (268)
.|++|+|+++|++++.+++||+|+.. |+|++|++++.+ .++++ |++
T Consensus 60 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-p~~ 138 (345)
T cd08286 60 HEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKL-PEG 138 (345)
T ss_pred ccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEEC-CCC
Confidence 36899999999999999999999863 788999999998 89999 888
Q ss_pred CCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCee
Q 024411 51 VPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEA 129 (268)
Q Consensus 51 ~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~~~g~~~v 129 (268)
++.. .++.+++.+++||+++...+++.+++++||+|+ |++|++++|+++..| .+|+++.+++.+.+.++ ++|++.+
T Consensus 139 ~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~ 215 (345)
T cd08286 139 VDEE-AAVMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHT 215 (345)
T ss_pred CCHH-HhhhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCce
Confidence 5443 377888999999998777788999999999886 999999999999999 69999888888888888 8999888
Q ss_pred eecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeee
Q 024411 130 FNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG 207 (268)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (268)
+++++. ++...+...+++ ++|+++||+|. ..+..++++++++|+++.+|.... ....+...++.+++++.+
T Consensus 216 v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08286 216 VNSAKG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITITT 288 (345)
T ss_pred eccccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEEe
Confidence 988775 777777777766 89999999986 678889999999999999986321 122345555778888876
Q ss_pred EEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCc--cceEEEEe
Q 024411 208 FIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQN--VGKQVVAV 266 (268)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~--~gkvvi~~ 266 (268)
.... .+.++++.+++.++.+++ .+.+++++++++++++.+.+... ..|++|++
T Consensus 289 ~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 289 GLVD------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ecCc------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 4321 245788889999998875 35678999999999999987643 45998864
No 76
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.97 E-value=6e-29 Score=205.94 Aligned_cols=250 Identities=23% Similarity=0.351 Sum_probs=196.4
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhh
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV 74 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~ 74 (268)
.|++|+|+++ +++.+++||+|++. |+|++|++++.+.++++ |++++.. +++.+++.+.+||+++...
T Consensus 63 ~e~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~ 138 (325)
T cd05280 63 IDAAGTVVSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPL-PEGLSLR-EAMILGTAGFTAALSVHRL 138 (325)
T ss_pred cccEEEEEEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEEC-CCCCCHH-HHHhhHHHHHHHHHHHHHH
Confidence 4678999988 56789999999973 78999999999999999 8885544 3778899999999998665
Q ss_pred cCC--C-CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCcc
Q 024411 75 CSP--K-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 75 ~~~--~-~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
... . .+++|+|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|++++++.+.. . ....+...++++|
T Consensus 139 ~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~d 215 (325)
T cd05280 139 EDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL-L-DESKKPLLKARWA 215 (325)
T ss_pred hhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH-H-HHHHHHhcCCCcc
Confidence 433 5 4579999999999999999999999999999999999999998 8999888876542 1 1222333334799
Q ss_pred EEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccc-cchHHHHHHHHHHHHc
Q 024411 152 IYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHIKE 230 (268)
Q Consensus 152 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 230 (268)
+++|++|+..+..++++++++|+++.+|...... ...+...++.+++++.+....... ....+.++.+.+++..
T Consensus 216 ~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (325)
T cd05280 216 GAIDTVGGDVLANLLKQTKYGGVVASCGNAAGPE-----LTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKP 290 (325)
T ss_pred EEEECCchHHHHHHHHhhcCCCEEEEEecCCCCc-----cccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhc
Confidence 9999999998999999999999999998743211 122334445788888887765432 2234556667777777
Q ss_pred CCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 231 g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
+.. +.+..++++++++++++.+.+++..||+|+++
T Consensus 291 ~~~-~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 291 DLL-EIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred CCc-cceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 744 45677899999999999999999999999864
No 77
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.97 E-value=4.1e-29 Score=207.08 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=192.8
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhh
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV 74 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~ 74 (268)
.|++|+|+++ ++..+++||+|+.. |+|+||++++++.++++ |++++.. +++.+++.+.+||+++...
T Consensus 63 ~e~~G~V~~~--~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~ 138 (326)
T cd08289 63 IDLAGTVVES--NDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPL-PKGLTLK-EAMILGTAGFTAALSIHRL 138 (326)
T ss_pred cceeEEEEEc--CCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEEC-CCCCCHH-HHhhhhhHHHHHHHHHHHH
Confidence 4678888875 45779999999874 89999999999999999 8885444 3778888999999988644
Q ss_pred cC---CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCcc
Q 024411 75 CS---PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 75 ~~---~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
.+ ..++++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++.++. ....+....++++|
T Consensus 139 ~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~d 215 (326)
T cd08289 139 EENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QEESIKPLEKQRWA 215 (326)
T ss_pred HhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HHHHHHhhccCCcC
Confidence 32 345789999999999999999999999999999999999999998 8999888877642 34455555434899
Q ss_pred EEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc-ccchHHHHHHHHHHHHc
Q 024411 152 IYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKE 230 (268)
Q Consensus 152 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 230 (268)
+++||+|+..+...+++++++|+++.+|..... ........++.+++++.+...... .....+.++.+.+.+..
T Consensus 216 ~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (326)
T cd08289 216 GAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGG-----EVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKP 290 (326)
T ss_pred EEEECCcHHHHHHHHHHhhcCCEEEEEeecCCC-----CCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCc
Confidence 999999998889999999999999999875321 111224455688899888764321 11223344444444432
Q ss_pred CCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 231 g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
+.+...+..+++++++++||+.+.+++..||+|+++
T Consensus 291 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 291 TQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 333334577899999999999999999999999864
No 78
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.97 E-value=6.5e-29 Score=208.62 Aligned_cols=249 Identities=20% Similarity=0.297 Sum_probs=204.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe--------------------------------------------------ccccc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG--------------------------------------------------MTGWE 33 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~--------------------------------------------------~g~~~ 33 (268)
.+++|+|+.+|++++.+++||+|++ .|+|+
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 138 (363)
T cd08279 59 HEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFA 138 (363)
T ss_pred ccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccce
Confidence 4678999999999999999999987 27899
Q ss_pred eeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeC
Q 024411 34 EYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAG 112 (268)
Q Consensus 34 ~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~ 112 (268)
+|++++.+.++++ |++++.. +++.+++++.+||+++....++.++++|+|+|+ |++|++++++++..|++ |+.+++
T Consensus 139 ~~~~~~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~ 215 (363)
T cd08279 139 EYTVVPEASVVKI-DDDIPLD-RAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDP 215 (363)
T ss_pred eeEEeccccEEEC-CCCCChH-HeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcC
Confidence 9999999999999 8885544 367788899999999888888999999999965 99999999999999996 999998
Q ss_pred CHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCc
Q 024411 113 SKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPE 190 (268)
Q Consensus 113 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 190 (268)
++++.+.++ ++|++++++++.. ++...++..+.+ ++|+++|++++ ..+..++++++++|+++.++.... ...
T Consensus 216 ~~~~~~~~~-~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~ 289 (363)
T cd08279 216 VPEKLELAR-RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP----GET 289 (363)
T ss_pred CHHHHHHHH-HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC----Ccc
Confidence 999999887 8999888888776 777888887755 89999999995 788999999999999999976431 112
Q ss_pred cccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEE
Q 024411 191 GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQV 263 (268)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv 263 (268)
...+...+..++..+.++..... ...+.++++++++.++.+++ .+.++++++++++|++.+.+++..+.++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 290 VSLPALELFLSEKRLQGSLYGSA--NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cccCHHHHhhcCcEEEEEEecCc--CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 23344455556666666554321 23577899999999999876 3667899999999999999887765554
No 79
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.97 E-value=4.8e-29 Score=207.30 Aligned_cols=244 Identities=25% Similarity=0.332 Sum_probs=200.8
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.+++|+|+++|++++.+++||+|++. |+|++|+.++.+.++++ |++++.
T Consensus 60 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~ 138 (334)
T PRK13771 60 HEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKV-PPNVSD 138 (334)
T ss_pred ccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEEC-CCCCCH
Confidence 47899999999999999999999974 68999999999999999 888554
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecC
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~ 133 (268)
. .++.+.+.+.+||+++... .+.++++++|+|++|.+|++++++++..|++++++++++++.+.++ ++ ++++++.+
T Consensus 139 ~-~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~ 214 (334)
T PRK13771 139 E-GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS 214 (334)
T ss_pred H-HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch
Confidence 4 3778889999999999776 8999999999999999999999999999999999999999999887 77 65566543
Q ss_pred ChhhHHHHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc
Q 024411 134 EEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH 213 (268)
Q Consensus 134 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (268)
++.+.+++. +++|+++||+|+.....++++++++|+++.+|..... ..........+.+++++.+....
T Consensus 215 ---~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-- 283 (334)
T PRK13771 215 ---KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHISA-- 283 (334)
T ss_pred ---hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecCC--
Confidence 344455554 3699999999998889999999999999999874321 11012233335677887776322
Q ss_pred ccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 214 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
..+.++.+++++.++.+++.+...++++++++|++.+.++...+|++++.
T Consensus 284 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 284 ---TKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred ---CHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 26678899999999999887778899999999999999888889999875
No 80
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.97 E-value=5.7e-29 Score=207.62 Aligned_cols=250 Identities=21% Similarity=0.270 Sum_probs=202.7
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.+++|+|..+|++++.|++||+|+++ |+|++|++++.+.++++ |++++.
T Consensus 58 ~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-P~~~~~ 136 (343)
T cd08236 58 HEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKI-PDHVDY 136 (343)
T ss_pred cceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEEC-cCCCCH
Confidence 57899999999999999999999974 78999999999999999 888544
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
. +++.+ .++.+||+++. ...+.++++|+|+|+ |.+|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++
T Consensus 137 ~-~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~ 211 (343)
T cd08236 137 E-EAAMI-EPAAVALHAVR-LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINP 211 (343)
T ss_pred H-HHHhc-chHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecC
Confidence 3 24444 67889999985 678999999999974 99999999999999997 999998988888887 8998888888
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEe
Q 024411 133 KEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (268)
+.. . ...+....++ ++|+++||.|+ ..+..++++++++|+++.+|...+. .......+..++.+++++.++..
T Consensus 212 ~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 286 (343)
T cd08236 212 KEE-D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWN 286 (343)
T ss_pred ccc-c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEee
Confidence 775 6 6677777766 79999999986 6789999999999999999864311 01112234455678888888776
Q ss_pred cccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHc-CCccceEEE
Q 024411 211 LDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFS-GQNVGKQVV 264 (268)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvi 264 (268)
........+.++++.+++.++.+. +.+...+++++++++++.+++ ++..+|+|+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 287 SYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 443223456778889999999875 445678899999999999998 667788874
No 81
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=7.7e-29 Score=204.15 Aligned_cols=247 Identities=20% Similarity=0.200 Sum_probs=201.4
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec--cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM--TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGE 81 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~ 81 (268)
.+++|+|+++|++++.+++||+|+++ |+|++|++++.+.++++ |+++ . .++.+..++.++++++. ..++++++
T Consensus 57 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~l-P~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~ 131 (312)
T cd08269 57 HEGWGRVVALGPGVRGLAVGDRVAGLSGGAFAEYDLADADHAVPL-PSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGK 131 (312)
T ss_pred eeeEEEEEEECCCCcCCCCCCEEEEecCCcceeeEEEchhheEEC-CCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCC
Confidence 46789999999999999999999986 89999999999999999 8874 2 23322378889999986 78899999
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG 159 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~ 159 (268)
+++|+| +|++|++++|+|+..|++ |+++++++++.+.+. ++|++++++.+.. ++...+.+.+++ ++|+++||.|+
T Consensus 132 ~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~ 208 (312)
T cd08269 132 TVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGH 208 (312)
T ss_pred EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCC
Confidence 999997 599999999999999998 999998888888887 8999888887665 788888888776 89999999986
Q ss_pred -hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--e
Q 024411 160 -KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--V 236 (268)
Q Consensus 160 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~ 236 (268)
..+...+++++++|+++.+|..+. .....++.....+++++.++.... +....+.++++.+++.++.+++ .
T Consensus 209 ~~~~~~~~~~l~~~g~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 282 (312)
T cd08269 209 QWPLDLAGELVAERGRLVIFGYHQD-----GPRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSL 282 (312)
T ss_pred HHHHHHHHHHhccCCEEEEEccCCC-----CCcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhh
Confidence 678899999999999999986431 112233345566777776654332 2233578899999999999986 3
Q ss_pred eehhcccccHHHHHHHHHcCCc-cceEEE
Q 024411 237 EDMAEGLESAPAALIGLFSGQN-VGKQVV 264 (268)
Q Consensus 237 ~~~~~~~~~~~~a~~~~~~~~~-~gkvvi 264 (268)
+.++++++++++|++.+.+++. .+|+++
T Consensus 283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 283 LTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 5678999999999999998754 578876
No 82
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=4.6e-29 Score=204.42 Aligned_cols=251 Identities=20% Similarity=0.295 Sum_probs=205.0
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec-----cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM-----TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPK 78 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (268)
.+++|+|.++|++++++++||+|+++ |+|++|++++.+.++++ |++++.. .++.++.++.+||+++. ...+.
T Consensus 43 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~aa~~~~~~~ta~~~l~-~~~~~ 119 (303)
T cd08251 43 FEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPEDQVVRK-PASLSFE-EACALPVVFLTVIDAFA-RAGLA 119 (303)
T ss_pred ceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEEccHHHeEEC-CCCCCHH-HHHHhHHHHHHHHHHHH-hcCCC
Confidence 46789999999999999999999986 79999999999999999 9885444 37788899999999984 67899
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENV 157 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~ 157 (268)
++++++|++++|++|++++|+++.+|++|+++++++++.+.++ ++|++.+++.... ++...+...+++ ++|+++|++
T Consensus 120 ~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~ 197 (303)
T cd08251 120 KGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTL 197 (303)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECC
Confidence 9999999999999999999999999999999999999999997 8999888888776 788888887776 899999999
Q ss_pred ChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc----ccchHHHHHHHHHHHHcCCc
Q 024411 158 GGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----YHLYPKFLEMIIPHIKEGKL 233 (268)
Q Consensus 158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~l 233 (268)
++......+++++++|+++.++..... ....... ..+.+++.+........ +....+.+.++.+++.++.+
T Consensus 198 ~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 272 (303)
T cd08251 198 SGEAIQKGLNCLAPGGRYVEIAMTALK----SAPSVDL-SVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGEL 272 (303)
T ss_pred cHHHHHHHHHHhccCcEEEEEeccCCC----ccCccCh-hHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCc
Confidence 888888999999999999998764311 0011111 22344444444333221 22334667888899999999
Q ss_pred eeeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
++.....+++++++++++.+.+++..+|+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 273 RPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred cCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 8777778999999999999999888888874
No 83
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.97 E-value=6.5e-29 Score=206.69 Aligned_cols=240 Identities=21% Similarity=0.210 Sum_probs=200.1
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe--------------------------------------ccccceeEeecCCccee
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG--------------------------------------MTGWEEYSLITAPHLFK 45 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~ 45 (268)
.+++|+|+.+|++++.|++||+|+. .|+|+||++++.+.+++
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ 138 (337)
T cd05283 59 HEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFK 138 (337)
T ss_pred cceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEE
Confidence 4789999999999999999999972 27899999999999999
Q ss_pred ecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Q 024411 46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG 125 (268)
Q Consensus 46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g 125 (268)
+ |++++.. .++.+.+.+.+||+++... .+.++++++|.| .|++|++++++++..|++|+++++++++.+.++ ++|
T Consensus 139 l-p~~~~~~-~aa~l~~~~~ta~~~~~~~-~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g 213 (337)
T cd05283 139 I-PEGLDSA-AAAPLLCAGITVYSPLKRN-GVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLG 213 (337)
T ss_pred C-CCCCCHH-HhhhhhhHHHHHHHHHHhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcC
Confidence 9 8885544 3778899999999998665 589999999977 599999999999999999999999999999998 899
Q ss_pred CCeeeecCChhhHHHHHHHHCCCCccEEEeCCChh-hHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhccee
Q 024411 126 FDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGK-LLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (268)
Q Consensus 126 ~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (268)
++.+++.... ++.. . ..+++|+++||+|.. .+..++++++++|+++.+|.... ....+...++.++++
T Consensus 214 ~~~vi~~~~~-~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~ 282 (337)
T cd05283 214 ADEFIATKDP-EAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE------PLPVPPFPLIFGRKS 282 (337)
T ss_pred CcEEecCcch-hhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC------CCccCHHHHhcCceE
Confidence 8888877653 3322 1 234799999999985 58999999999999999987432 112345566778999
Q ss_pred eeeEEecccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
+.+..... .+.++.+++++.++++++.+ ..++++++++||+.+.+++..||+|++
T Consensus 283 i~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 283 VAGSLIGG-----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred EEEecccC-----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 99877654 56788899999999998765 578999999999999999999999874
No 84
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.97 E-value=1e-28 Score=204.22 Aligned_cols=253 Identities=28% Similarity=0.392 Sum_probs=211.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec--------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM--------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC 75 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~ 75 (268)
.|++|+|.++|+++++|++||+|+++ |++++|+.++.+.++++ |++++.. ++++++++..+||+++....
T Consensus 63 ~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~~a~~~l~~~~ 140 (325)
T cd08253 63 SDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPL-PDGVSFE-QGAALGIPALTAYRALFHRA 140 (325)
T ss_pred cceEEEEEeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHh
Confidence 46789999999999999999999974 78999999999999999 8885444 37789999999999998878
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEE
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYF 154 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~ 154 (268)
++.++++++|+|+++++|++++++++..|++|+++++++++.+.+. ++|++++++.... ++...+.+.+.+ ++|+++
T Consensus 141 ~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi 218 (325)
T cd08253 141 GAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDVII 218 (325)
T ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEEE
Confidence 8999999999999999999999999999999999999999999887 8898888887765 677778777665 899999
Q ss_pred eCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc-ccchHHHHHHHHHHHHcCCc
Q 024411 155 ENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKL 233 (268)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l 233 (268)
||+++......+++++++|+++.++... .........++.+++++.+...+.. +....+.++.+.+++.++.+
T Consensus 219 ~~~~~~~~~~~~~~l~~~g~~v~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 292 (325)
T cd08253 219 EVLANVNLAKDLDVLAPGGRIVVYGSGG------LRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGAL 292 (325)
T ss_pred ECCchHHHHHHHHhhCCCCEEEEEeecC------CcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCc
Confidence 9999988888999999999999998743 1112233344677777777664432 23345667778888899988
Q ss_pred eeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
++.....+++++++++++.+.++...+|+++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 293 RPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred cCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 877778899999999999999988899999863
No 85
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.97 E-value=3.6e-29 Score=208.31 Aligned_cols=246 Identities=22% Similarity=0.253 Sum_probs=200.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec-----------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhh
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM-----------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFY 72 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~ 72 (268)
.+++|+|..+|++++.+++||+|+++ |+|++|++++.+.++++ |++++.. .++.+++++.+||+++.
T Consensus 60 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~ 137 (339)
T cd08249 60 CDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKI-PDNISFE-EAATLPVGLVTAALALF 137 (339)
T ss_pred eeeeEEEEEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEEC-CCCCCHH-HceecchHHHHHHHHHh
Confidence 46789999999999999999999986 79999999999999999 8884444 36778889999999987
Q ss_pred hhcCC----------CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHH
Q 024411 73 EVCSP----------KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAAL 142 (268)
Q Consensus 73 ~~~~~----------~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 142 (268)
...++ .++++++|+|++|++|++++++++..|++|+.++ ++++.+.++ ++|+++++++... ++.+.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l 214 (339)
T cd08249 138 QKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVEDI 214 (339)
T ss_pred ccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHHH
Confidence 66544 7899999999999999999999999999999988 568888887 8999889988876 788888
Q ss_pred HHHCCCCccEEEeCCCh-hhHHhHHHhhhc--CCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecc-------
Q 024411 143 KRYFPEGIDIYFENVGG-KLLDAVLPNMKI--RGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD------- 212 (268)
Q Consensus 143 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 212 (268)
++.+++++|+++|++|+ ..+..+++++++ +|+++.+|...... .+..+++........
T Consensus 215 ~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 282 (339)
T cd08249 215 RAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVLGYTVFGEIPE 282 (339)
T ss_pred HHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEEeeeecccccc
Confidence 77766689999999998 889999999999 99999998743211 011222322222211
Q ss_pred cccchHHHHHHHHHHHHcCCceeeeehhcc--cccHHHHHHHHHcCC-ccceEEEEe
Q 024411 213 HYHLYPKFLEMIIPHIKEGKLVYVEDMAEG--LESAPAALIGLFSGQ-NVGKQVVAV 266 (268)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~--~~~~~~a~~~~~~~~-~~gkvvi~~ 266 (268)
.+......++.+.+++.++.+.+.+...++ ++++++|++.+.+++ ..+|+|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 283 DREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred cccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 122334567888899999999877656777 999999999999988 889999874
No 86
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.4e-28 Score=204.62 Aligned_cols=248 Identities=25% Similarity=0.332 Sum_probs=211.8
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------cccceeEeecCCcceeecCCCCCchhhhhh
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------TGWEEYSLITAPHLFKIQHTDVPLSYYTGI 59 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~ 59 (268)
.+++|.|+.+|+++.++++||+|++. |+|++|+.++.+.++++ |++++.. +++.
T Consensus 63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~a~~ 140 (336)
T cd08276 63 SDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRA-PDHLSFE-EAAT 140 (336)
T ss_pred cceeEEEEEeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEEC-CCCCCHH-Hhhh
Confidence 46789999999999999999999874 57999999999999999 8885443 3778
Q ss_pred ccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCC-hhhH
Q 024411 60 LGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EADL 138 (268)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~ 138 (268)
++.++.+||+++...+.++++++++|+| +|++|++++++++..|++|+++++++++.+.++ ++|.+++++.+. . ++
T Consensus 141 ~~~~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~ 217 (336)
T cd08276 141 LPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-DW 217 (336)
T ss_pred hhHHHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-CH
Confidence 8889999999998888899999999996 699999999999999999999999999999998 788888888776 4 67
Q ss_pred HHHHHHHCCC-CccEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccch
Q 024411 139 NAALKRYFPE-GIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLY 217 (268)
Q Consensus 139 ~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (268)
...+++.+++ ++|+++|+++...+..++++++++|+++.+|..... ....+....+.+++++.+.....
T Consensus 218 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----- 287 (336)
T cd08276 218 GEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS----- 287 (336)
T ss_pred HHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc-----
Confidence 7788888776 899999999988889999999999999999875421 11234566778999999887654
Q ss_pred HHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 218 PKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 218 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.+.++++.+++.++.+.+.....+++++++++++.+.+++..+|+++++
T Consensus 288 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 5678888899999988877667889999999999999888889999863
No 87
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.97 E-value=1.1e-28 Score=207.20 Aligned_cols=249 Identities=19% Similarity=0.256 Sum_probs=199.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------------------------------------------------ccc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------------------------------------------------TGW 32 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (268)
.|++|+|.++|++++.+++||+|++. |+|
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ 138 (365)
T cd05279 59 HEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTF 138 (365)
T ss_pred cceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccc
Confidence 46789999999999999999999853 589
Q ss_pred ceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEe
Q 024411 33 EEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSA 111 (268)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~ 111 (268)
++|++++.+.++++ |++++.. +++.+.+++.+||+++...+++.+++++||+|+ |++|++++++|+..|++ |++++
T Consensus 139 a~~~~v~~~~~~~l-P~~~~~~-~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~ 215 (365)
T cd05279 139 AEYTVVSEISLAKI-DPDAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVD 215 (365)
T ss_pred cceEEecCCceEEC-CCCCCHH-HhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence 99999999999999 9885544 377788899999999888889999999999974 99999999999999995 67777
Q ss_pred CCHHHHHHHHHhcCCCeeeecCChh-hHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhh-cCCEEEEEcccccccCCC
Q 024411 112 GSKDKVDLLKNKFGFDEAFNYKEEA-DLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMK-IRGRIAACGMISQYNLDK 188 (268)
Q Consensus 112 ~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~ 188 (268)
+++++.+.++ ++|++++++.++.+ ++.+.+++.+++++|+++|++|. ..+..++++++ ++|+++.+|.... .
T Consensus 216 ~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----~ 290 (365)
T cd05279 216 INKDKFEKAK-QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----G 290 (365)
T ss_pred CCHHHHHHHH-HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----C
Confidence 7889999997 89998888776521 45566777665589999999986 78889999999 9999999876321 0
Q ss_pred CccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
.....+...+ .++.++.|+...++ ...+.+.++++++.++.+++ .+.++++++++++|++.+.+++.. |+++
T Consensus 291 ~~~~~~~~~~-~~~~~l~g~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 291 TEATLDPNDL-LTGRTIKGTVFGGW--KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred CceeeCHHHH-hcCCeEEEEeccCC--chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 1223344444 56677777654433 22567888999999998875 466789999999999999876654 5554
No 88
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.97 E-value=2.1e-28 Score=203.88 Aligned_cols=249 Identities=27% Similarity=0.378 Sum_probs=210.1
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.|++|+|+++|++++.+++||+|+.. |++++|++++.+.++++ |++++.
T Consensus 63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~-p~~~~~ 141 (342)
T cd08266 63 SDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPI-PDNLSF 141 (342)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeC-CCCCCH
Confidence 46789999999999999999999874 67999999999999999 887444
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecC
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~ 133 (268)
. +++.++..+.+|++++.....+.++++++|+|+++++|++++++++..|++|+.+++++++.+.++ .++.+.+++..
T Consensus 142 ~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 219 (342)
T cd08266 142 E-EAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYR 219 (342)
T ss_pred H-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecC
Confidence 4 377788889999999888888999999999999899999999999999999999999999888887 78877777776
Q ss_pred ChhhHHHHHHHHCCC-CccEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecc
Q 024411 134 EEADLNAALKRYFPE-GIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD 212 (268)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (268)
.. ++...+...+.+ ++|++++++|...+...+++++++|+++.++..... ....+....+.+++++.+.....
T Consensus 220 ~~-~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
T cd08266 220 KE-DFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT 293 (342)
T ss_pred Ch-HHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC
Confidence 65 676777776655 899999999998889999999999999999864421 11233445577888888876654
Q ss_pred cccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 213 HYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
...+.++.+++.++.+++.+...|+++++++|++.+.++...+|+++++
T Consensus 294 -----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 294 -----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred -----HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 5678889999999999888778899999999999999888889999863
No 89
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.97 E-value=2e-28 Score=202.72 Aligned_cols=248 Identities=26% Similarity=0.365 Sum_probs=196.1
Q ss_pred ccceEEEEecCCCCCCCCCCeEEec---------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhc
Q 024411 5 SGYGVAKVLDSENPEFNKGDLVWGM---------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC 75 (268)
Q Consensus 5 ~~~G~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~ 75 (268)
+++|+|.. +++..|++||+|+++ |++++|+.++.+.++++ |++++.. +++.++..+.+|++++....
T Consensus 63 e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~ 138 (323)
T TIGR02823 63 DAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPL-PEGLSLR-EAMALGTAGFTAALSVMALE 138 (323)
T ss_pred eeEEEEEe--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHhh
Confidence 56788777 567789999999975 79999999999999999 8885444 37788888999988875443
Q ss_pred --CCCCCc-EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccE
Q 024411 76 --SPKHGE-CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDI 152 (268)
Q Consensus 76 --~~~~~~-~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~ 152 (268)
.+.+++ +++|+|++|.+|++++++|+.+|++++++++++++.+.++ ++|++.+++.++. .. .++....+++|.
T Consensus 139 ~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~d~ 214 (323)
T TIGR02823 139 RNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP--PGKPLEKERWAG 214 (323)
T ss_pred hcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH--HHHHhcCCCceE
Confidence 378888 9999999999999999999999999999988888889897 8999888876543 32 444444446999
Q ss_pred EEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc-ccchHHHHHHHHHHHHcC
Q 024411 153 YFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEG 231 (268)
Q Consensus 153 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g 231 (268)
++||+|+..+...+++++++|+++.+|..... ....+...++.+++++.+...... .....+.++++.+++..+
T Consensus 215 vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (323)
T TIGR02823 215 AVDTVGGHTLANVLAQLKYGGAVAACGLAGGP-----DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPR 289 (323)
T ss_pred EEECccHHHHHHHHHHhCCCCEEEEEcccCCC-----CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcC
Confidence 99999998889999999999999999875321 112233445578888888765322 222334567777788888
Q ss_pred CceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 232 ~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.+++. ...++++++++|++.+.+++..+|++++.
T Consensus 290 ~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 290 NLESI-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred CCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 88765 44899999999999999999899999863
No 90
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.97 E-value=1.4e-28 Score=205.13 Aligned_cols=245 Identities=24% Similarity=0.262 Sum_probs=196.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.+++|+|.++|++++.+++||+|++. |+|++|+.++.+.++++ |+++
T Consensus 63 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-P~~l-- 139 (341)
T PRK05396 63 HEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKI-PDDI-- 139 (341)
T ss_pred eeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEEC-cCCC--
Confidence 46899999999999999999999873 78999999999999999 8884
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
++..+++..++.++++++.. ...++++|+|+|+ |++|++++|+++.+|+ +|+++++++++.+.++ ++|+++++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~ 215 (341)
T PRK05396 140 PDDLAAIFDPFGNAVHTALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNV 215 (341)
T ss_pred CHHHhHhhhHHHHHHHHHHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecC
Confidence 43344455666777766533 3468999999875 9999999999999999 6888888888888888 8999989988
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEe
Q 024411 133 KEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (268)
++. ++.+.+++.+.+ ++|+++||.|+ ..+..++++++++|+++.+|.... . .......++.+++++.++..
T Consensus 216 ~~~-~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~l~~~~~ 288 (341)
T PRK05396 216 AKE-DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-----D-MAIDWNKVIFKGLTIKGIYG 288 (341)
T ss_pred ccc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-----C-CcccHHHHhhcceEEEEEEc
Confidence 876 788888887766 89999999986 778999999999999999986431 1 11224566677788777643
Q ss_pred cccccchHHHHHHHHHHHHcC-CceeeeehhcccccHHHHHHHHHcCCccceEEEEec
Q 024411 211 LDHYHLYPKFLEMIIPHIKEG-KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (268)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 267 (268)
..+ .+.+..+++++.++ ++.+.+...++++++++|++.+.++. .||++++|+
T Consensus 289 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 289 REM----FETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred cCc----cchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 221 23456677888888 46566778889999999999998877 799999875
No 91
>PRK10083 putative oxidoreductase; Provisional
Probab=99.97 E-value=1.5e-28 Score=204.70 Aligned_cols=244 Identities=17% Similarity=0.183 Sum_probs=194.7
Q ss_pred CccceEEEEecCCCCCCCCCCeEE---------------------------ec---cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVW---------------------------GM---TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~---------------------------~~---g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.|++|+|+.+|++++.+++||+|+ ++ |+|+||+.++.+.++++ |+++
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~-- 135 (339)
T PRK10083 59 HEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRI-PDAI-- 135 (339)
T ss_pred cceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEEC-cCCC--
Confidence 367899999999999999999998 33 78999999999999999 8884
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHH-cCCE-EEEEeCCHHHHHHHHHhcCCCeeee
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKL-LGCY-VVGSAGSKDKVDLLKNKFGFDEAFN 131 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~-~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~ 131 (268)
++..+++..++.++++++ ...+++++++|+|+| .|++|++++|+++. +|++ ++++++++++.+.++ ++|++++++
T Consensus 136 ~~~~a~~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~ 212 (339)
T PRK10083 136 ADQYAVMVEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVIN 212 (339)
T ss_pred CHHHHhhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEec
Confidence 434445667888888654 667899999999999 59999999999996 6995 777778888999988 899998988
Q ss_pred cCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEE
Q 024411 132 YKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (268)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (268)
+++. .+.+.+.. .+ ++|+++|++|. ..+..++++++++|+++.+|.... ....+...+..+++++.+..
T Consensus 213 ~~~~-~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~ 283 (339)
T PRK10083 213 NAQE-PLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGITGKELSIFSSR 283 (339)
T ss_pred Cccc-cHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHHhhcceEEEEEe
Confidence 8765 66666643 23 57899999996 688999999999999999987432 11123334445666666543
Q ss_pred ecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcC-CccceEEEEecC
Q 024411 210 VLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSG-QNVGKQVVAVAP 268 (268)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi~~~~ 268 (268)
. ..+.++++++++.++.+++ .+..+|+++++++|++.+.++ ...+|+++++.+
T Consensus 284 ~------~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 284 L------NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred c------ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 2 2456888999999999987 367889999999999999864 456899998864
No 92
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.97 E-value=1.6e-28 Score=207.58 Aligned_cols=247 Identities=21% Similarity=0.233 Sum_probs=197.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe------------------------------ccccceeEeecCCcceeecCCCCC-
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG------------------------------MTGWEEYSLITAPHLFKIQHTDVP- 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~- 52 (268)
.+++|+|+++|++++.|++||+|++ .|+|++|++++++.++++ |++++
T Consensus 93 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~l-P~~~~~ 171 (384)
T cd08265 93 HEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEI-NELREI 171 (384)
T ss_pred cceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEEC-Cccccc
Confidence 3679999999999999999999985 278999999999999999 76531
Q ss_pred ----chhhhhhccchHHHHHHHhhhh-cCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC
Q 024411 53 ----LSYYTGILGMPGMTAYVGFYEV-CSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF 126 (268)
Q Consensus 53 ----~~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~ 126 (268)
+..++++++.++++||+++... ++++++++|+|+| .|++|++++|+|+..|+ +|+++++++++.+.++ ++|+
T Consensus 172 ~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~ 249 (384)
T cd08265 172 YSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGA 249 (384)
T ss_pred cccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCC
Confidence 3334677888999999999666 6899999999996 59999999999999999 7999998888888888 8999
Q ss_pred CeeeecCCh--hhHHHHHHHHCCC-CccEEEeCCCh--hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhc
Q 024411 127 DEAFNYKEE--ADLNAALKRYFPE-GIDIYFENVGG--KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSK 201 (268)
Q Consensus 127 ~~v~~~~~~--~~~~~~~~~~~~~-~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 201 (268)
++++++++. .++...+++.+++ ++|+++|+.|+ ..+..++++++++|+++.+|.... ....+...+..+
T Consensus 250 ~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~ 323 (384)
T cd08265 250 DYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------TVPLHLEVLQVR 323 (384)
T ss_pred CEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------CCcccHHHHhhC
Confidence 888876621 1566778888877 89999999996 367899999999999999986432 112233445556
Q ss_pred ceeeeeEEecccccchHHHHHHHHHHHHcCCceee--eehhcccccHHHHHHHHHcCCccceEEE
Q 024411 202 RLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
..++.+..... ....++++++++.++.+++. +.++|+++++++|++.+.++ ..+|+++
T Consensus 324 ~~~l~~~~~~~----~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 324 RAQIVGAQGHS----GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred ceEEEEeeccC----CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 66777654322 13468889999999998763 56779999999999997665 5688875
No 93
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.97 E-value=2.8e-28 Score=202.47 Aligned_cols=243 Identities=26% Similarity=0.330 Sum_probs=198.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.+++|+|+.+|++++.+++||+|+++ |+|++|++++...++++ |++++.
T Consensus 60 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~ 138 (332)
T cd08259 60 HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKL-PDNVSD 138 (332)
T ss_pred ccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEEC-CCCCCH
Confidence 46889999999999999999999974 68999999999999999 888554
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecC
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~ 133 (268)
. .++.+++++.+||+++.. +.+.++++++|+|++|++|++++++++..|++|+++++++++.+.+. +++.+.+++..
T Consensus 139 ~-~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 215 (332)
T cd08259 139 E-SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS 215 (332)
T ss_pred H-HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH
Confidence 4 377889999999999976 78999999999999999999999999999999999998888888887 78887666543
Q ss_pred ChhhHHHHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc
Q 024411 134 EEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH 213 (268)
Q Consensus 134 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (268)
++.+.+.+.. ++|++++++|......++++++++|+++.++..... ...........++.++.+...
T Consensus 216 ---~~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~--- 282 (332)
T cd08259 216 ---KFSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD-----PAPLRPGLLILKEIRIIGSIS--- 282 (332)
T ss_pred ---HHHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC-----CcCCCHHHHHhCCcEEEEecC---
Confidence 3444555433 699999999998889999999999999999864321 111122233346666665532
Q ss_pred ccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 214 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
...+.++++.+++.++.+++.+..+++++++++|++.+.+++..+|++++
T Consensus 283 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 283 --ATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred --CCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 23667888999999999988887889999999999999998888999874
No 94
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.97 E-value=2e-28 Score=206.44 Aligned_cols=251 Identities=21% Similarity=0.194 Sum_probs=199.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe----------------------------------------ccccceeEeecCC--
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG----------------------------------------MTGWEEYSLITAP-- 41 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~-- 41 (268)
.+++|+|+++|++++.+++||+|+. .|+|+||++++.+
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~ 138 (375)
T cd08282 59 HEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADF 138 (375)
T ss_pred cccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccC
Confidence 4789999999999999999999985 1679999999976
Q ss_pred cceeecCCCCCchh--hhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 024411 42 HLFKIQHTDVPLSY--YTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVD 118 (268)
Q Consensus 42 ~~~~~~p~~~~~~~--~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~ 118 (268)
.++++ |++++... .+++++.++++||+++ ..+++.++++|+|.|+ |++|++++|+++..|+ +|+++++++++.+
T Consensus 139 ~~~~l-P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~ 215 (375)
T cd08282 139 NLLKL-PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLD 215 (375)
T ss_pred cEEEC-CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 89999 88855442 2567888999999999 7788999999999875 9999999999999998 8999888999999
Q ss_pred HHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCChh------------hHHhHHHhhhcCCEEEEEcccccccC
Q 024411 119 LLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGK------------LLDAVLPNMKIRGRIAACGMISQYNL 186 (268)
Q Consensus 119 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~ 186 (268)
.++ ++|+ ..+++++. ++.+.+.+.+++++|+++||+|+. .+..++++++++|+++.+|.......
T Consensus 216 ~~~-~~g~-~~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~ 292 (375)
T cd08282 216 LAE-SIGA-IPIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDP 292 (375)
T ss_pred HHH-HcCC-eEeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCccc
Confidence 998 8998 45677665 677777776656799999999975 37899999999999988876432111
Q ss_pred C-------CCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCC
Q 024411 187 D-------KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQ 257 (268)
Q Consensus 187 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~ 257 (268)
. ......+...++.++..+.+.... ..+.++.+.+++.++++++ .+.+.++++++++|++.+.+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~ 367 (375)
T cd08282 293 GAGDAAAKQGELSFDFGLLWAKGLSFGTGQAP-----VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL 367 (375)
T ss_pred ccccccccCccccccHHHHHhcCcEEEEecCC-----chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC
Confidence 0 001223445555666655543321 2567888899999999986 3778999999999999999988
Q ss_pred ccceEEEEe
Q 024411 258 NVGKQVVAV 266 (268)
Q Consensus 258 ~~gkvvi~~ 266 (268)
.+|+|+++
T Consensus 368 -~~kvvv~~ 375 (375)
T cd08282 368 -ETKVVIKP 375 (375)
T ss_pred -ceEEEeCC
Confidence 88999853
No 95
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.97 E-value=1.7e-28 Score=202.70 Aligned_cols=252 Identities=28% Similarity=0.417 Sum_probs=209.7
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.+++|+|..+|+++..+++||+|+++ |+|++|+.++.+.++++ |++++.. .+++++.++.++++++...+.+.++
T Consensus 63 ~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~l~~~~~~a~~~~~~~~~~~~~ 140 (323)
T cd05276 63 LEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPV-PEGLSLV-EAAALPEVFFTAWQNLFQLGGLKAG 140 (323)
T ss_pred ceeEEEEEeeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccC-CCCCCHH-HHhhchhHHHHHHHHHHHhcCCCCC
Confidence 46789999999999999999999987 79999999999999999 8884433 3778899999999999888889999
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG 159 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~ 159 (268)
++++|+|++|++|++++++++..|++|+++++++++.+.++ +++.+.+++.... ++...+.+...+ ++|+++|+.|+
T Consensus 141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~ 218 (323)
T cd05276 141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGG 218 (323)
T ss_pred CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCch
Confidence 99999999999999999999999999999999988888887 8888888887765 777777776655 89999999999
Q ss_pred hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc-----ccchHHHHHHHHHHHHcCCce
Q 024411 160 KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKLV 234 (268)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~l~ 234 (268)
..+...+++++++|+++.+|..+... ...+...++.+++++.++..... +......++++.+++.++.++
T Consensus 219 ~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (323)
T cd05276 219 DYLARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIR 293 (323)
T ss_pred HHHHHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCcc
Confidence 77888999999999999998643211 12334445578888888776442 112335567788899999998
Q ss_pred eeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
+.....|++++++++++.+.++...+|+++
T Consensus 294 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 294 PVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred CCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 777778999999999999998888888874
No 96
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.97 E-value=2e-28 Score=203.98 Aligned_cols=244 Identities=21% Similarity=0.278 Sum_probs=197.4
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe---------------------------c---cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG---------------------------M---TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~---------------------------~---g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.+++|+|.++|+++++|++||+|++ + |+|++|++++.+.++++ |++++.
T Consensus 61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~ 139 (340)
T TIGR00692 61 HEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKN-PKSIPP 139 (340)
T ss_pred cceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEEC-cCCCCh
Confidence 5689999999999999999999986 2 78999999999999999 888443
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
..++++.++.+|++++ .....++++++|+|+ |++|++++|+++.+|++ |+++.+++++.+.++ ++|++.++++
T Consensus 140 --~~a~~~~~~~~a~~~~--~~~~~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~ 213 (340)
T TIGR00692 140 --EYATIQEPLGNAVHTV--LAGPISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNP 213 (340)
T ss_pred --HhhhhcchHHHHHHHH--HccCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEcc
Confidence 4566788889999987 345789999999875 99999999999999996 888877888888888 8999888888
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchH-HHHhcceeeeeEE
Q 024411 133 KEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLM-YLVSKRLRMEGFI 209 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 209 (268)
... ++.+.+.+.+++ ++|+++||+|+ ..+...+++++++|+++.+|..... . ..++. .++.+++++.+..
T Consensus 214 ~~~-~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~-----~~~~~~~~~~~~~~~~~~~ 286 (340)
T TIGR00692 214 FKE-DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-V-----TIDFTNKVIFKGLTIYGIT 286 (340)
T ss_pred ccc-CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-c-----ccchhhhhhhcceEEEEEe
Confidence 776 788888887766 89999999886 6788999999999999999874211 1 11122 4556677766544
Q ss_pred ecccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 210 VLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.. ...+.+.++.+++.++.++ +.+...+++++++++++.+.+++. ||+|+++
T Consensus 287 ~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 287 GR----HMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred cC----CchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 21 2235678888999999986 456778999999999999988774 9999875
No 97
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.97 E-value=2.9e-28 Score=203.05 Aligned_cols=240 Identities=20% Similarity=0.261 Sum_probs=192.4
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-----------------------------------ccccceeEeecCCcceeecC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-----------------------------------MTGWEEYSLITAPHLFKIQH 48 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~~p 48 (268)
.+++|+|+++|+++++|++||+|++ .|+|+||++++.+.++++ |
T Consensus 59 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~i-P 137 (339)
T cd08232 59 HEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPL-P 137 (339)
T ss_pred ccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEEC-c
Confidence 4679999999999999999999986 278999999999999999 9
Q ss_pred CCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC
Q 024411 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD 127 (268)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~ 127 (268)
+++ +.+.++++.++.+||+++.....+ ++++|||.|+ |++|++++|+|+.+|+ +++++++++++.+.++ +++.+
T Consensus 138 ~~~--~~~~aa~~~~~~~a~~~l~~~~~~-~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~ 212 (339)
T cd08232 138 DGL--SLRRAALAEPLAVALHAVNRAGDL-AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGAD 212 (339)
T ss_pred CCC--CHHHhhhcchHHHHHHHHHhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCC
Confidence 884 434344568889999998776666 9999999875 8999999999999999 8999998888888777 88988
Q ss_pred eeeecCChhhHHHHHHHHC-C-CCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhccee
Q 024411 128 EAFNYKEEADLNAALKRYF-P-EGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (268)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~-~-~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (268)
++++++.. .+ .+.. . +++|+++|+.|+ ..+...+++|+++|+++.+|... .....+....+.++++
T Consensus 213 ~vi~~~~~-~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~------~~~~~~~~~~~~~~~~ 281 (339)
T cd08232 213 ETVNLARD-PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLG------GPVPLPLNALVAKELD 281 (339)
T ss_pred EEEcCCch-hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC------CCccCcHHHHhhcceE
Confidence 88887764 42 2222 2 269999999996 67889999999999999997633 1112233344567777
Q ss_pred eeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
+.+... ..+.++.+++++.++.+++ .+.++++++++++|++.+.+++..||+|+++
T Consensus 282 ~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 282 LRGSFR------FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred EEEEec------CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 766542 2456888899999998864 3567899999999999999888899999874
No 98
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.97 E-value=2.7e-28 Score=203.98 Aligned_cols=242 Identities=21% Similarity=0.236 Sum_probs=194.8
Q ss_pred CccceEEEEecCCCC--CCCCCCeEEe---------------------------c-----cccceeEeecCC-cceeecC
Q 024411 4 ISGYGVAKVLDSENP--EFNKGDLVWG---------------------------M-----TGWEEYSLITAP-HLFKIQH 48 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~--~~~~Gd~V~~---------------------------~-----g~~~~~~~v~~~-~~~~~~p 48 (268)
.|++|+|.++|+.++ +|++||+|++ + |+|++|+.++++ .++++ |
T Consensus 68 ~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l-P 146 (350)
T cd08256 68 HEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV-P 146 (350)
T ss_pred cceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC-C
Confidence 568999999999999 8999999986 2 799999999988 47899 8
Q ss_pred CCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCC
Q 024411 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFD 127 (268)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~ 127 (268)
++++.. .++.+ .++.++|+++ ..++++++++|+|.| +|++|++++++|+.+|++ ++++++++++.+.+. ++|++
T Consensus 147 ~~~~~~-~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~ 221 (350)
T cd08256 147 DDIPPE-DAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGAD 221 (350)
T ss_pred CCCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCc
Confidence 885443 25555 8889999998 677899999999955 599999999999999985 667777888888887 89998
Q ss_pred eeeecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHH-Hhccee
Q 024411 128 EAFNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYL-VSKRLR 204 (268)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 204 (268)
.++++... ++...+.+.+++ ++|+++|++|+ ..+..++++++++|+++.+|.... . .......+ ..++++
T Consensus 222 ~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~ 294 (350)
T cd08256 222 VVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-----P-VTVDWSIIGDRKELD 294 (350)
T ss_pred EEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC-----C-CccChhHhhcccccE
Confidence 88888765 777888887776 89999999996 678899999999999999976321 1 11122222 245666
Q ss_pred eeeEEecccccchHHHHHHHHHHHHcCCceee--eehhcccccHHHHHHHHHcCCccceEEE
Q 024411 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
+.++... ...+.++.+++.++.+++. +.++++++++++|++.+++++..+|+++
T Consensus 295 i~~~~~~------~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 295 VLGSHLG------PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEeccC------chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 6665433 2357788999999999873 6678999999999999999888889874
No 99
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=2.1e-28 Score=199.20 Aligned_cols=252 Identities=23% Similarity=0.327 Sum_probs=206.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec--cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM--TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGE 81 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~ 81 (268)
.+++|+|.++|++++.+++||+|+++ |+|+||+.++.+.++++ |++++.. +++.++++..++|.++.....+++++
T Consensus 33 ~e~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~ 110 (293)
T cd05195 33 LECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARLVVKI-PDSLSFE-EAATLPVAYLTAYYALVDLARLQKGE 110 (293)
T ss_pred eeeeEEEEeecCCccCCCCCCEEEEEecCcccceEEechhheEeC-CCCCCHH-HHhhchHHHHHHHHHHHHHhccCCCC
Confidence 46789999999999999999999998 89999999999999999 8875444 36777899999999998888899999
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC--CCeeeecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG--FDEAFNYKEEADLNAALKRYFPE-GIDIYFENVG 158 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g 158 (268)
+++|+|++|++|++++++++..|++|+++++++++.+.++ ..+ ++.+++.... ++.+.+++.+++ ++|+++|++|
T Consensus 111 ~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~ 188 (293)
T cd05195 111 SVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLS 188 (293)
T ss_pred EEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCC
Confidence 9999999999999999999999999999999988888888 676 5677877765 788888887766 8999999999
Q ss_pred hhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc----ccchHHHHHHHHHHHHcCCce
Q 024411 159 GKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----YHLYPKFLEMIIPHIKEGKLV 234 (268)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~l~ 234 (268)
+..+..++++++++|+++.+|.....+. .... ...+.+++++.......+ .....+.+..+.+++.++.++
T Consensus 189 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05195 189 GELLRASWRCLAPFGRFVEIGKRDILSN----SKLG-MRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK 263 (293)
T ss_pred chHHHHHHHhcccCceEEEeeccccccC----Cccc-hhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence 9888999999999999999986432110 0111 122445666666554332 122345678888999999998
Q ss_pred eeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
+.....+++++++++++.+.+++..+|+++
T Consensus 264 ~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 264 PLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 877778899999999999998888888874
No 100
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.97 E-value=5e-28 Score=203.63 Aligned_cols=251 Identities=18% Similarity=0.200 Sum_probs=196.1
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------------------------------------------------ccc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------------------------------------------------TGW 32 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (268)
.|++|+|+++|++++.+++||+|+.. |+|
T Consensus 66 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 145 (373)
T cd08299 66 HEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTF 145 (373)
T ss_pred ccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcc
Confidence 57899999999999999999999753 689
Q ss_pred ceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024411 33 EEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (268)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~ 111 (268)
+||++++.+.++++ |++++.. +++.+.+++.+||+++...++++++++++|+|+ |++|++++++++..|+ +|++++
T Consensus 146 ~e~~~v~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~ 222 (373)
T cd08299 146 SEYTVVDEIAVAKI-DAAAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVD 222 (373)
T ss_pred cceEEecccceeeC-CCCCChH-HhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence 99999999999999 8885444 377788899999999877788999999999975 9999999999999999 899999
Q ss_pred CCHHHHHHHHHhcCCCeeeecCCh-hhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhh-hcCCEEEEEcccccccCCC
Q 024411 112 GSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNM-KIRGRIAACGMISQYNLDK 188 (268)
Q Consensus 112 ~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~ 188 (268)
+++++.+.++ ++|++++++..+. .++...+.+.+++++|+++||+|+ ..+..++..+ +++|+++.+|.....
T Consensus 223 ~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~---- 297 (373)
T cd08299 223 INKDKFAKAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS---- 297 (373)
T ss_pred CCHHHHHHHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----
Confidence 9999999998 8999888877643 036666776665689999999996 6677766655 579999999874321
Q ss_pred CccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
........ .+.++.++.++....+. ..+.+.++++.+.++.++ +.+.++|+++++++|++.+.+++. .|+++++
T Consensus 298 ~~~~~~~~-~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 298 QNLSINPM-LLLTGRTWKGAVFGGWK--SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred ceeecCHH-HHhcCCeEEEEEecCCc--cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 11122222 24467788887665432 134555666667666543 456788999999999999987664 4777753
No 101
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=2.3e-28 Score=198.69 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=204.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec--cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM--TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGE 81 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~ 81 (268)
.+++|.|.++|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. .++++++++.++++++.....+.+++
T Consensus 29 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~ 106 (288)
T smart00829 29 GECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARLVVPI-PDGLSFE-EAATVPVVFLTAYYALVDLARLRPGE 106 (288)
T ss_pred ceeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHHeEEC-CCCCCHH-HHHhchHHHHHHHHHHHHHhCCCCCC
Confidence 57799999999999999999999997 89999999999999999 8885444 37788889999999987778899999
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeeecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEADLNAALKRYFPE-GIDIYFENVG 158 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g 158 (268)
+++|+|++|++|++++++++..|++|+++++++++.+.++ ++|. +.++++... ++.+.+...+++ ++|+++|+++
T Consensus 107 ~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~ 184 (288)
T smart00829 107 SVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDDHIFSSRDL-SFADEILRATGGRGVDVVLNSLA 184 (288)
T ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChhheeeCCCc-cHHHHHHHHhCCCCcEEEEeCCC
Confidence 9999999999999999999999999999999999999997 8998 677877765 677778777766 8999999999
Q ss_pred hhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc---ccchHHHHHHHHHHHHcCCcee
Q 024411 159 GKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKLVY 235 (268)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~~ 235 (268)
+..+...+++++++|+++.+|..... .....+... +.+++++.+...... +....+.+.++.+++.++.+++
T Consensus 185 ~~~~~~~~~~l~~~g~~v~~g~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (288)
T smart00829 185 GEFLDASLRCLAPGGRFVEIGKRDIR----DNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP 259 (288)
T ss_pred HHHHHHHHHhccCCcEEEEEcCcCCc----cccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC
Confidence 88888899999999999999864311 011112222 455666666554221 1123445777888999998877
Q ss_pred eeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 236 VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
...+.+++++++++++.+..++..+|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 260 LPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred cCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 65677899999999999998877788764
No 102
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=7.2e-28 Score=199.44 Aligned_cols=254 Identities=26% Similarity=0.340 Sum_probs=211.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec--------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM--------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC 75 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~ 75 (268)
.+++|+|..+|+++..+++||+|+++ |++++|+.++.+.++++ |++++.. .++.+++++.+||+++....
T Consensus 63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~ 140 (328)
T cd08268 63 YEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKL-PDGLSFV-EAAALWMQYLTAYGALVELA 140 (328)
T ss_pred cceEEEEEeeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhc
Confidence 46799999999999999999999876 78999999999999999 8884433 37788999999999998888
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEE
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYF 154 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~ 154 (268)
.+.++++++|+|++|++|++++++++..|++++.+++++++.+.++ ++|.+.+++.+.. .+...+.+.+.+ ++|+++
T Consensus 141 ~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi 218 (328)
T cd08268 141 GLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVF 218 (328)
T ss_pred CCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceEEE
Confidence 8999999999999999999999999999999999999999999887 8888778887765 777777777666 899999
Q ss_pred eCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc---ccchHHHHHHHHHHHHcC
Q 024411 155 ENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEG 231 (268)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g 231 (268)
+++++.....++++++++|+++.+|.... .....+....+.+++++.+...... +......++.+.+++.++
T Consensus 219 ~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (328)
T cd08268 219 DPVGGPQFAKLADALAPGGTLVVYGALSG-----EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASG 293 (328)
T ss_pred ECCchHhHHHHHHhhccCCEEEEEEeCCC-----CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCC
Confidence 99999888899999999999999976432 1112333345788888888775432 223345667777788889
Q ss_pred CceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 232 ~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.+.+.....+++++++++++.+.+++..+|+++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 294 ALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred CCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 88877777889999999999999888888999863
No 103
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=4.7e-28 Score=202.23 Aligned_cols=245 Identities=19% Similarity=0.217 Sum_probs=199.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-c-----------------------------cccceeEeecCC--cceeecCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-M-----------------------------TGWEEYSLITAP--HLFKIQHTDV 51 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-~-----------------------------g~~~~~~~v~~~--~~~~~~p~~~ 51 (268)
.|++|+|+++|++++.+++||+|++ + |+|+||++++.+ .++++ |+++
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-P~~l 137 (345)
T cd08287 59 HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKV-PGSP 137 (345)
T ss_pred cceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEEC-CCCC
Confidence 4789999999999999999999986 1 788999999975 79999 8885
Q ss_pred Cchhh----hhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCC
Q 024411 52 PLSYY----TGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGF 126 (268)
Q Consensus 52 ~~~~~----~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~ 126 (268)
+.... .+++...+.+||+++. .+.+.++++++|.| +|++|++++|+|+..|++ ++++++++++.+.++ ++|+
T Consensus 138 ~~~~~~~~~~~~l~~~~~~a~~~~~-~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga 214 (345)
T cd08287 138 SDDEDLLPSLLALSDVMGTGHHAAV-SAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGA 214 (345)
T ss_pred ChhhhhhhhhHhhhcHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCC
Confidence 54111 1244577899999984 67899999999977 599999999999999995 778887877888888 8999
Q ss_pred CeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhccee
Q 024411 127 DEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (268)
Q Consensus 127 ~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (268)
+++++++.. .+.+.+.+.+++ ++|+++|++|+ ..+..++++++++|+++.+|.... ....+....+.++++
T Consensus 215 ~~v~~~~~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~ 287 (345)
T cd08287 215 TDIVAERGE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDVRELFFRNVG 287 (345)
T ss_pred ceEecCCcc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCHHHHHhcceE
Confidence 999998876 778888887776 89999999986 788999999999999999876431 122334466788888
Q ss_pred eeeEEecccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
+.+..... .+.++++++++.++.+++ .+...++++++++|++.+.+++.. |++|+
T Consensus 288 ~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 288 LAGGPAPV-----RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred EEEecCCc-----HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 87743322 567899999999999886 356788999999999998876654 99885
No 104
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.97 E-value=5.3e-28 Score=201.22 Aligned_cols=249 Identities=22% Similarity=0.242 Sum_probs=202.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSP 77 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~ 77 (268)
.+++|+|..+|++++.+++||+|+.+ |+|++|+.++.+.++++ |++++.. .++.++....+||+++...+.+
T Consensus 65 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~ 142 (336)
T cd08252 65 WDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHK-PKSLSFA-EAAALPLTSLTAWEALFDRLGI 142 (336)
T ss_pred cceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeC-CCCCCHH-HhhhhhhHHHHHHHHHHHhcCC
Confidence 46789999999999999999999986 78999999999999999 8875444 3678899999999998777888
Q ss_pred CC-----CcEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCcc
Q 024411 78 KH-----GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 78 ~~-----~~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
.+ +++++|+|++|++|++++++++.+| ++|+++++++++.+.++ ++|++++++... ++...+....++++|
T Consensus 143 ~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d 219 (336)
T cd08252 143 SEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVD 219 (336)
T ss_pred CCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCC
Confidence 77 9999999998999999999999999 89999999999999997 899988887764 555666644334899
Q ss_pred EEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc-----cc--chHHHHHH
Q 024411 152 IYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YH--LYPKFLEM 223 (268)
Q Consensus 152 ~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~ 223 (268)
+++|++|+ ..+..++++++++|+++.+|... ...+...++.+++++.+...... +. ...+.+++
T Consensus 220 ~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (336)
T cd08252 220 YIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNE 291 (336)
T ss_pred EEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHH
Confidence 99999996 78899999999999999997631 11222333467788777654321 11 23456888
Q ss_pred HHHHHHcCCceeeee---hhcccccHHHHHHHHHcCCccceEEEE
Q 024411 224 IIPHIKEGKLVYVED---MAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 224 ~~~~~~~g~l~~~~~---~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
+.+++.++.+++... ..++++++++|++.+.++...+|++++
T Consensus 292 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 292 VADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 999999999987533 347899999999999998888998863
No 105
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=8.3e-28 Score=198.82 Aligned_cols=254 Identities=26% Similarity=0.385 Sum_probs=211.7
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.+++|.|..+|+++..+++||+|+++ |+|++|++++.+.++++ |++++.. .+++++.++.++|+++.....+.++
T Consensus 63 ~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~ 140 (325)
T TIGR02824 63 LEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPV-PEGLSLV-EAAALPETFFTVWSNLFQRGGLKAG 140 (325)
T ss_pred ceeEEEEEEeCCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeC-CCCCCHH-HHHhhhHHHHHHHHHHHHhcCCCCC
Confidence 46789999999999999999999986 79999999999999999 8884443 3778899999999998888899999
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG 159 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~ 159 (268)
++++|+|++|++|++++++++..|++|+++++++++.+.++ ++|.+.+++.... ++...+....++ ++|++++++|+
T Consensus 141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~ 218 (325)
T TIGR02824 141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGG 218 (325)
T ss_pred CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCch
Confidence 99999999999999999999999999999999998888887 8888777777665 677778777765 89999999998
Q ss_pred hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc-c----cchHHHHHHHHHHHHcCCce
Q 024411 160 KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-Y----HLYPKFLEMIIPHIKEGKLV 234 (268)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~g~l~ 234 (268)
.....++++++++|+++.+|...... ...+...++.+++++.+...... . ......+.++.+++.++.++
T Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 293 (325)
T TIGR02824 219 SYLNRNIKALALDGRIVQIGFQGGRK-----AELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVR 293 (325)
T ss_pred HHHHHHHHhhccCcEEEEEecCCCCc-----CCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCccc
Confidence 88889999999999999998743211 12334445588999998876442 1 12334567788899999988
Q ss_pred eeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
+.....+++++++++++.+.++...+|+++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 294 PVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred CccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 77777889999999999999888889999863
No 106
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.97 E-value=7.1e-28 Score=200.80 Aligned_cols=244 Identities=23% Similarity=0.270 Sum_probs=195.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.+++|+|+.+|++++.+++||+|+++ |+|++|++++.+.++++ |+++
T Consensus 63 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~l-P~~~-- 139 (341)
T cd05281 63 HEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKN-DKDI-- 139 (341)
T ss_pred cceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEEC-cCCC--
Confidence 46789999999999999999999873 78999999999999999 8884
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
+.++++++.++.++++++. ....++++|+|+|+ |++|++++|+++..|+ +|+++++++++.+.++ ++|.++++++
T Consensus 140 ~~~~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 215 (341)
T cd05281 140 PPEIASIQEPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINP 215 (341)
T ss_pred CHHHhhhhhHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCc
Confidence 4345677788889998874 35678999999875 9999999999999999 7988888888888888 8999888877
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEe
Q 024411 133 KEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (268)
+.. ++. .+.+.+++ ++|+++||+|+ .....++++++++|+++.+|.... ..........+.++..+.++..
T Consensus 216 ~~~-~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 288 (341)
T cd05281 216 REE-DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-----PVDIDLNNLVIFKGLTVQGITG 288 (341)
T ss_pred ccc-cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-----CcccccchhhhccceEEEEEec
Confidence 765 677 77777776 99999999987 678899999999999999876432 1000111234556777766542
Q ss_pred cccccchHHHHHHHHHHHHcCCce--eeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 211 LDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.. ..+.++++.+++.++.+. +.+.+.++++++++|++.+.+++ .||+|+++
T Consensus 289 ~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 289 RK----MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred CC----cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 21 234567888999999876 44556789999999999999988 89999863
No 107
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.96 E-value=8.2e-28 Score=199.19 Aligned_cols=235 Identities=28% Similarity=0.342 Sum_probs=189.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
-+++|+|+++|++++.+++||+|+.+ |+|++|++++.+.++++ |++++.
T Consensus 60 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~ 138 (325)
T cd08264 60 AEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKI-PDSISD 138 (325)
T ss_pred cceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeC-CCCCCH
Confidence 36789999999999999999999853 78999999999999999 888554
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecC
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~ 133 (268)
. +++.+++++.+||+++.. .+++++++++|+|++|++|++++++|+.+|++|+++++ .+.++ ++|++++++..
T Consensus 139 ~-~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~ 211 (325)
T cd08264 139 E-LAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYD 211 (325)
T ss_pred H-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecch
Confidence 4 477888899999999865 78999999999999999999999999999999988873 25666 78988888764
Q ss_pred ChhhHHHHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc
Q 024411 134 EEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH 213 (268)
Q Consensus 134 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (268)
. ..+.+++.+ +++|+++|++|+..+..++++++++|+++.+|.... .....+...++.++.++.+...+.
T Consensus 212 ~---~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~- 281 (325)
T cd08264 212 E---VEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG-----GEVKLDLSDLYSKQISIIGSTGGT- 281 (325)
T ss_pred H---HHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCC-----CCCccCHHHHhhcCcEEEEccCCC-
Confidence 2 344566555 679999999999888999999999999999986321 112344556666777777765443
Q ss_pred ccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceE
Q 024411 214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQ 262 (268)
Q Consensus 214 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 262 (268)
++.++++++++.... ..+...|+++++++|++.+.+++..+|+
T Consensus 282 ----~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 282 ----RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred ----HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 567888888886443 4466789999999999999988777775
No 108
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.96 E-value=1.4e-27 Score=199.89 Aligned_cols=257 Identities=22% Similarity=0.216 Sum_probs=191.6
Q ss_pred CccceEEEEecCCCC-CCCCCCeEEec--------cccceeEeecCC----cceeecCCCCCchhhhhhccchHHHHHHH
Q 024411 4 ISGYGVAKVLDSENP-EFNKGDLVWGM--------TGWEEYSLITAP----HLFKIQHTDVPLSYYTGILGMPGMTAYVG 70 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~-~~~~Gd~V~~~--------g~~~~~~~v~~~----~~~~~~p~~~~~~~~~a~l~~~~~~a~~~ 70 (268)
.|++|+|.++|++++ .|++||+|+++ |+|++|++++.. .++++ |++++.. +++.++....+||++
T Consensus 64 ~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~ 141 (352)
T cd08247 64 RDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRK-PENISLE-EAAAWPLVLGTAYQI 141 (352)
T ss_pred ceeEEEEEEeCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEEC-CCCCCHH-HHHHhHHHHHHHHHH
Confidence 467999999999998 89999999975 789999999998 68999 8885544 377888999999999
Q ss_pred hhhhc-CCCCCcEEEEecCcchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHhcCCCeeeecCChhh---HHHHHHH
Q 024411 71 FYEVC-SPKHGECVFISAASGAVGQLVGQFAKLL-GC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD---LNAALKR 144 (268)
Q Consensus 71 l~~~~-~~~~~~~vlI~ga~g~~G~~~i~l~~~~-g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~~~ 144 (268)
+...+ .++++++++|+|+++++|++++++|+.. +. .++.+. ++++.+.++ ++|++.+++.++. + +...+.+
T Consensus 142 l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~ 218 (352)
T cd08247 142 LEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-SGVKLLKPVLE 218 (352)
T ss_pred HHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-cccchHHHHHH
Confidence 97777 7999999999999999999999999987 55 677766 566666776 8999888887664 4 4444444
Q ss_pred -HCCC-CccEEEeCCCh-hhHHhHHHhhh---cCCEEEEEcccccccCCC-C-----ccccchHHHHhcceeeeeEEecc
Q 024411 145 -YFPE-GIDIYFENVGG-KLLDAVLPNMK---IRGRIAACGMISQYNLDK-P-----EGVHNLMYLVSKRLRMEGFIVLD 212 (268)
Q Consensus 145 -~~~~-~~d~v~d~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~ 212 (268)
.+++ ++|+++||+|+ .....++++++ ++|+++.++...+.+... . ..... ...+.+++++.......
T Consensus 219 ~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 297 (352)
T cd08247 219 NVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSAN-ARKLFGSLGLWSYNYQF 297 (352)
T ss_pred hhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchh-hhhhhhhhcCCCcceEE
Confidence 4424 89999999998 67889999999 999999874321110000 0 00000 11122333222222111
Q ss_pred c-ccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 213 H-YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 213 ~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
. .....+.++++.+++.++.+++.+.+.++++++++|++.+++++..||+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 298 FLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred EEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 0 11114678889999999999887778899999999999999988899999863
No 109
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.96 E-value=3.8e-27 Score=198.06 Aligned_cols=243 Identities=19% Similarity=0.227 Sum_probs=190.6
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-------------------------------ccccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-------------------------------MTGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.|++|+|+++|+++++|++||+|++ .|+|+||++++.+.++++ |++++
T Consensus 79 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~-P~~l~ 157 (364)
T PLN02702 79 HECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL-PENVS 157 (364)
T ss_pred cceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEEC-CCCCC
Confidence 4789999999999999999999986 278999999999999999 88844
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeee
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFN 131 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~ 131 (268)
. ..+++..+..++++++ ...++.++++++|+|+ |++|++++|+++..|++ ++++++++++.+.++ ++|++.+++
T Consensus 158 ~--~~aa~~~~~~~a~~~~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~ 232 (364)
T PLN02702 158 L--EEGAMCEPLSVGVHAC-RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVL 232 (364)
T ss_pred H--HHHhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEe
Confidence 3 3333334566688887 6678999999999974 99999999999999995 777777888888888 899987765
Q ss_pred cC--ChhhHHHHHHHH---CCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceee
Q 024411 132 YK--EEADLNAALKRY---FPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205 (268)
Q Consensus 132 ~~--~~~~~~~~~~~~---~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (268)
++ .. ++.+.+... .++++|+++|++|+ ..+..++++++++|+++.+|...+ ...........+++++
T Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i 305 (364)
T PLN02702 233 VSTNIE-DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN------EMTVPLTPAAAREVDV 305 (364)
T ss_pred cCcccc-cHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CCcccHHHHHhCccEE
Confidence 43 23 555555543 23489999999995 788999999999999999986421 1122344566778888
Q ss_pred eeEEecccccchHHHHHHHHHHHHcCCce--eeeehhccc--ccHHHHHHHHHcCCccceEEEE
Q 024411 206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGL--ESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
.++... ...++.+++++.++.+. +.+...|++ +++++|++.+.+++..+|+++.
T Consensus 306 ~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 306 VGVFRY------RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred EEeccC------hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 776542 24678889999999875 445567555 7999999999988888899985
No 110
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=4.1e-27 Score=194.85 Aligned_cols=248 Identities=27% Similarity=0.366 Sum_probs=204.7
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec--------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM--------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC 75 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~ 75 (268)
.+++|+|.++|+++..|++||+|+++ |+|++|+.++.+.++++ |++++.. .++.++..+.+||+++....
T Consensus 63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~ 140 (326)
T cd08272 63 CDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALK-PANLSMR-EAAALPLVGITAWEGLVDRA 140 (326)
T ss_pred cceeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccC-CCCCCHH-HHHHhHHHHHHHHHHHHHhc
Confidence 46789999999999999999999985 68999999999999999 8884443 36778889999999988888
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEE
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYF 154 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~ 154 (268)
++.++++++|+|++|++|++++++++..|++|+.++++ ++.+.++ ++|.+.+++... .+...+...+++ ++|.++
T Consensus 141 ~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~ 216 (326)
T cd08272 141 AVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDVVF 216 (326)
T ss_pred CCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcEEE
Confidence 99999999999999999999999999999999999977 8888887 899887777654 366777777766 899999
Q ss_pred eCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecc--c----ccchHHHHHHHHHHH
Q 024411 155 ENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD--H----YHLYPKFLEMIIPHI 228 (268)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~ 228 (268)
||.++......+++++++|+++.++... .........+++++.+..... . +....+.++.+.+++
T Consensus 217 ~~~~~~~~~~~~~~l~~~g~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (326)
T cd08272 217 DTVGGETLDASFEAVALYGRVVSILGGA---------THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLV 287 (326)
T ss_pred ECCChHHHHHHHHHhccCCEEEEEecCC---------ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHH
Confidence 9999988888999999999999987632 011112235677777766432 1 223456788889999
Q ss_pred HcCCceeeee-hhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 229 KEGKLVYVED-MAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 229 ~~g~l~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.++.+++.+. ..+++++++++++.+.+++..+|+++++
T Consensus 288 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 288 ERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 9999987755 7899999999999999888889999864
No 111
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.96 E-value=4e-27 Score=195.83 Aligned_cols=242 Identities=26% Similarity=0.357 Sum_probs=193.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe------------------------------ccccceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG------------------------------MTGWEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
.+++|+|+.+|++++.+++||+|+. .|+|++|++++.+.++++ |++++.
T Consensus 58 ~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~~~ 136 (334)
T cd08234 58 HEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKI-PDNLSF 136 (334)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEEC-cCCCCH
Confidence 4688999999999999999999986 278999999999999999 988554
Q ss_pred hhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 54 SYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
. .++. ..++.++++++ ..+++.++++++|+|+ |.+|++++++|+..|++ |+++++++++.+.++ ++|.+.++++
T Consensus 137 ~-~aa~-~~~~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 211 (334)
T cd08234 137 E-EAAL-AEPLSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDP 211 (334)
T ss_pred H-HHhh-hhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecC
Confidence 4 2443 47788999998 7788999999999975 99999999999999997 888988999999987 8898888877
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEec
Q 024411 133 KEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (268)
... ++... +...++++|+++||+|. ..+..++++++++|+++.+|..... .....+...++.+++++.+....
T Consensus 212 ~~~-~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 285 (334)
T cd08234 212 SRE-DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFIN 285 (334)
T ss_pred CCC-CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEeccC
Confidence 764 55444 33333489999999985 7788999999999999999874321 11122333444577777765432
Q ss_pred ccccchHHHHHHHHHHHHcCCcee--eeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 212 DHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
.+.++++.+++.++.+++ .+..++++++++++++.+.+ ...+|+|+
T Consensus 286 ------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 286 ------PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred ------HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 456888999999999874 35678899999999999998 77889886
No 112
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=1.1e-28 Score=217.64 Aligned_cols=238 Identities=21% Similarity=0.269 Sum_probs=205.5
Q ss_pred CCCCCeEEec---cccceeEeecCCcceeecCCCCCchhh-hhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHH
Q 024411 20 FNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYY-TGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQL 95 (268)
Q Consensus 20 ~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~-~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~ 95 (268)
.+-|.||+++ -++++.+.++.+.+|.+ |++ +..+ +++.|+.+.|||+||...+.+++|++||||+++||+|++
T Consensus 1492 d~~GrRvM~mvpAksLATt~l~~rd~lWev-P~~--WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQA 1568 (2376)
T KOG1202|consen 1492 DASGRRVMGMVPAKSLATTVLASRDFLWEV-PSK--WTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQA 1568 (2376)
T ss_pred cCCCcEEEEeeehhhhhhhhhcchhhhhhC-Ccc--cchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHH
Confidence 5778999998 58999999999999999 988 7766 779999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---CeeeecCChhhHHHHHHHHCCC-CccEEEeCCChhhHHhHHHhhhc
Q 024411 96 VGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEADLNAALKRYFPE-GIDIYFENVGGKLLDAVLPNMKI 171 (268)
Q Consensus 96 ~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~ 171 (268)
+|.+|..+|++|+.+..|.++.+++.+.+.- .+.-|.++. +|...+.+.+.| |+|+|++....+.++..++||+.
T Consensus 1569 AIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~ 1647 (2376)
T KOG1202|consen 1569 AIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLAL 1647 (2376)
T ss_pred HHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHh
Confidence 9999999999999999999999998854432 345677777 999999999998 99999999999999999999999
Q ss_pred CCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHH----HcCCceeeeehhcccccHH
Q 024411 172 RGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHI----KEGKLVYVEDMAEGLESAP 247 (268)
Q Consensus 172 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~l~~~~~~~~~~~~~~ 247 (268)
+||+..+|..+ . ..........|.+|.+++|.-+.++++-..+..+++..++ ++|.++|+.+.+|+-.+++
T Consensus 1648 ~GRFLEIGKfD---L--SqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE 1722 (2376)
T KOG1202|consen 1648 HGRFLEIGKFD---L--SQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVE 1722 (2376)
T ss_pred cCeeeeeccee---c--ccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHH
Confidence 99999998743 1 1112334667889999999998887554455555555555 5568899999999999999
Q ss_pred HHHHHHHcCCccceEEEEe
Q 024411 248 AALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 248 ~a~~~~~~~~~~gkvvi~~ 266 (268)
+||++|.+++..||+|+++
T Consensus 1723 ~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1723 DAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred HHHHHHhccCccceEEEEE
Confidence 9999999999999999986
No 113
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2.8e-27 Score=196.51 Aligned_cols=251 Identities=24% Similarity=0.269 Sum_probs=194.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.+++|+|+.+|++++.|++||+|+++ |+|++|+.++.+.++++ |++++.. ++++++++..+||+++...+.+.++
T Consensus 63 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~g 140 (331)
T cd08273 63 YDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPV-PEGVDAA-EAVCLVLNYVTAYQMLHRAAKVLTG 140 (331)
T ss_pred cceEEEEEEeCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCC
Confidence 46789999999999999999999996 89999999999999999 8885544 3678999999999999887889999
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCChh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGK 160 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 160 (268)
++++|+|++|++|++++++++..|++|+.+++ +++.+.++ ++|+. .++.... ++... ....+++|+++||+|+.
T Consensus 141 ~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~-~~~~~~~-~~~~~--~~~~~~~d~vl~~~~~~ 214 (331)
T cd08273 141 QRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGAT-PIDYRTK-DWLPA--MLTPGGVDVVFDGVGGE 214 (331)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCe-EEcCCCc-chhhh--hccCCCceEEEECCchH
Confidence 99999999999999999999999999999997 88888887 78864 3444443 44433 23334899999999997
Q ss_pred hHHhHHHhhhcCCEEEEEcccccccCCCCccccch------------HHHHhcceeeeeEEeccc--ccchHHHHHHHHH
Q 024411 161 LLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL------------MYLVSKRLRMEGFIVLDH--YHLYPKFLEMIIP 226 (268)
Q Consensus 161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 226 (268)
....++++++++|+++.+|........ ....+. .....+++++........ +....+.++++++
T Consensus 215 ~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 292 (331)
T cd08273 215 SYEESYAALAPGGTLVCYGGNSSLLQG--RRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLD 292 (331)
T ss_pred HHHHHHHHhcCCCEEEEEccCCCCCCc--cccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHH
Confidence 789999999999999999874421110 000000 011122333333222110 2234567889999
Q ss_pred HHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 227 HIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 227 ~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
++.++.+++.+..++++++++++++.+.++...||+|+
T Consensus 293 ~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 293 LLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 99999998877778999999999999998888889885
No 114
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=2.6e-27 Score=191.88 Aligned_cols=240 Identities=25% Similarity=0.256 Sum_probs=188.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEeccccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEE
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECV 83 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~v 83 (268)
.|++|+|.++|++++++++||+|+++++|++|++++.+.++++ |++++.. +++.+ +++.+||+++. .+++++++++
T Consensus 26 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~~~~i-p~~l~~~-~aa~~-~~~~ta~~~~~-~~~~~~g~~v 101 (277)
T cd08255 26 YSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANLLVPL-PDGLPPE-RAALT-ALAATALNGVR-DAEPRLGERV 101 (277)
T ss_pred cceeEEEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHHeeEC-cCCCCHH-HhHHH-HHHHHHHHHHH-hcCCCCCCEE
Confidence 5778999999999999999999999999999999999999999 8885443 35555 78999999985 6789999999
Q ss_pred EEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcC-CCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh-h
Q 024411 84 FISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFG-FDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG-K 160 (268)
Q Consensus 84 lI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~ 160 (268)
+|+|+ |++|++++++|+.+|++ |+++++++++.+.++ ++| .+.+++.... . ..++++|+++|+++. .
T Consensus 102 lI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~--~------~~~~~~d~vl~~~~~~~ 171 (277)
T cd08255 102 AVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTAD--E------IGGRGADVVIEASGSPS 171 (277)
T ss_pred EEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccchh--h------hcCCCCCEEEEccCChH
Confidence 99975 99999999999999998 999999999999888 888 4444433221 1 122379999999886 7
Q ss_pred hHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccc-------cchHHHHHHHHHHHHcCCc
Q 024411 161 LLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-------HLYPKFLEMIIPHIKEGKL 233 (268)
Q Consensus 161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~l 233 (268)
.+...+++++++|+++.+|..... .......+..+.+++.+....... ....+.++++++++.++.+
T Consensus 172 ~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 245 (277)
T cd08255 172 ALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRL 245 (277)
T ss_pred HHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCc
Confidence 788999999999999999874321 111112334455677766654321 1123678899999999999
Q ss_pred eeeeehhcccccHHHHHHHHHcC-CccceEE
Q 024411 234 VYVEDMAEGLESAPAALIGLFSG-QNVGKQV 263 (268)
Q Consensus 234 ~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvv 263 (268)
++.+.+.++++++++|++.+.++ ....|++
T Consensus 246 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~ 276 (277)
T cd08255 246 EALITHRVPFEDAPEAYRLLFEDPPECLKVV 276 (277)
T ss_pred cccccCccCHHHHHHHHHHHHcCCccceeee
Confidence 88877889999999999999876 3445665
No 115
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.96 E-value=8.7e-27 Score=192.96 Aligned_cols=249 Identities=22% Similarity=0.286 Sum_probs=196.4
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhh-
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYE- 73 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~- 73 (268)
.+++|+|.+ ++++++++||+|+++ |+|++|++++.+.++++ |++++.. +++.++..+++|+.++..
T Consensus 63 ~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~~~~~ 138 (324)
T cd08288 63 IDLAGTVVE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPL-PEGLSAR-QAMAIGTAGFTAMLCVMAL 138 (324)
T ss_pred cceEEEEEe--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeC-CCCCCHH-HHhhhhhHHHHHHHHHHHH
Confidence 356788877 777889999999983 78999999999999999 8885443 377888888898877641
Q ss_pred -hcCCC-CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCcc
Q 024411 74 -VCSPK-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 74 -~~~~~-~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
..... ++++++|+|++|++|++++|+|+.+|++|++++.++++.+.++ ++|+++++++.+. . ..++...++++|
T Consensus 139 ~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~--~~~~~~~~~~~~ 214 (324)
T cd08288 139 EDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL-S--EPGRPLQKERWA 214 (324)
T ss_pred hhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh-h--HhhhhhccCccc
Confidence 12344 6789999999999999999999999999999999999999997 8999888887643 2 245555555789
Q ss_pred EEEeCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc-ccchHHHHHHHHHHHHc
Q 024411 152 IYFENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKE 230 (268)
Q Consensus 152 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 230 (268)
.++|++++..+...+..++.+|+++.+|...+. ....+...++.+++++.+...... .....+.++.+.+++.+
T Consensus 215 ~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (324)
T cd08288 215 GAVDTVGGHTLANVLAQTRYGGAVAACGLAGGA-----DLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDP 289 (324)
T ss_pred EEEECCcHHHHHHHHHHhcCCCEEEEEEecCCC-----CCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhc
Confidence 999999987777888889999999999874221 111233444578899988764332 22345677888888889
Q ss_pred CCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 231 g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
+.+.+. ...++++++++|++.+.+++..+|+++++
T Consensus 290 ~~~~~i-~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 290 ALLEAL-TREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred CCcccc-ceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 988764 57889999999999999999999999864
No 116
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.96 E-value=6.2e-27 Score=193.38 Aligned_cols=253 Identities=26% Similarity=0.354 Sum_probs=210.0
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.+++|.|..+|+++..+++||+|+++ |++++|+.++.+.++++ |++++.. +++.+..+..+|++++.....+.++
T Consensus 63 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~ 140 (323)
T cd08241 63 SEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPL-PDGLSFE-EAAALPVTYGTAYHALVRRARLQPG 140 (323)
T ss_pred ceeEEEEEEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCC
Confidence 36789999999999999999999996 68999999999999999 8885444 3667888999999999877889999
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCCh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGG 159 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~ 159 (268)
++++|+|++|++|++++++++..|++|+.+++++++.+.++ ++|...+++.... ++...+...+++ ++|.++||+|+
T Consensus 141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g~ 218 (323)
T cd08241 141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGG 218 (323)
T ss_pred CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECccH
Confidence 99999999999999999999999999999999999999888 8888777877765 777788887776 89999999999
Q ss_pred hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccc----cchHHHHHHHHHHHHcCCcee
Q 024411 160 KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY----HLYPKFLEMIIPHIKEGKLVY 235 (268)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~l~~ 235 (268)
..+..++++++++|+++.+|..... .........+.+++++.+.....+. ....+.++++.+++.++.+++
T Consensus 219 ~~~~~~~~~~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (323)
T cd08241 219 DVFEASLRSLAWGGRLLVIGFASGE-----IPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP 293 (323)
T ss_pred HHHHHHHHhhccCCEEEEEccCCCC-----cCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc
Confidence 8888999999999999999863311 1112223456688888887654432 123467788899999999987
Q ss_pred eeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 236 VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
.....|++++++++++.+.++...+|++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 294 HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 777789999999999999988878888863
No 117
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2.3e-26 Score=190.38 Aligned_cols=249 Identities=22% Similarity=0.334 Sum_probs=202.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSP 77 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~ 77 (268)
.+++|.|+.+|+++..+++||+|+++ |+|++|+.++.+.++++ |++++.. .++.+.+++.+|++++...+.+
T Consensus 62 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~i-p~~~~~~-~~a~~~~~~~~a~~~~~~~~~~ 139 (325)
T cd08271 62 VDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPL-PDSLSFE-EAAALPCAGLTAYQALFKKLRI 139 (325)
T ss_pred cceEEEEEEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEEC-CCCCCHH-HHHhhhhhHHHHHHHHHHhcCC
Confidence 46789999999999999999999985 68999999999999999 8885444 3778899999999999888889
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFEN 156 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~ 156 (268)
.++++++|+|++|++|++++++++..|++|+++. ++++.+.+. .+|++.+++.... .+...+....++ ++|++++|
T Consensus 140 ~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~ 216 (325)
T cd08271 140 EAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDT 216 (325)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEEC
Confidence 9999999999989999999999999999999887 677778887 8898888887765 677778877766 89999999
Q ss_pred CChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccc----c----cchHHHHHHHHHHH
Q 024411 157 VGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----Y----HLYPKFLEMIIPHI 228 (268)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~ 228 (268)
+++......+++++++|+++.++..... . ....+.+++.+........ . ....+.+.++.+++
T Consensus 217 ~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
T cd08271 217 VGGETAAALAPTLAFNGHLVCIQGRPDA-----S----PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELL 287 (325)
T ss_pred CCcHhHHHHHHhhccCCEEEEEcCCCCC-----c----chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHH
Confidence 9987777899999999999998653211 0 1122334444444333221 1 23445678888999
Q ss_pred HcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 229 KEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 229 ~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
.++.+++.....++++++.++++.+.++...+|+++++
T Consensus 288 ~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 288 AAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 99999877667889999999999999888889999863
No 118
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.96 E-value=6e-27 Score=195.94 Aligned_cols=254 Identities=25% Similarity=0.336 Sum_probs=191.9
Q ss_pred ccceEEEEecCCCCCCCCCCeEEec------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCC
Q 024411 5 SGYGVAKVLDSENPEFNKGDLVWGM------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPK 78 (268)
Q Consensus 5 ~~~G~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (268)
|++|+|..+|++++++++||+|+++ |+|++|+.++.+.++++ |++++.. .++.+++++.+||+++...+.+.
T Consensus 80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~ 157 (350)
T cd08248 80 DCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKK-PKNLSHE-EAASLPYAGLTAWSALVNVGGLN 157 (350)
T ss_pred eeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecC-CCCCCHH-HHhhchhHHHHHHHHHHHhccCC
Confidence 6789999999999999999999984 89999999999999999 8885444 37788999999999997777775
Q ss_pred C----CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEE
Q 024411 79 H----GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYF 154 (268)
Q Consensus 79 ~----~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~ 154 (268)
+ +++++|+|++|++|++++++++.+|++|+++.++ ++.+.++ ++|.+.+++.... ++...+... +++|+++
T Consensus 158 ~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~--~~vd~vi 232 (350)
T cd08248 158 PKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DFEEELTER--GKFDVIL 232 (350)
T ss_pred CccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hHHHHHHhc--CCCCEEE
Confidence 4 9999999999999999999999999999988855 5667777 8898888887765 555555432 3799999
Q ss_pred eCCChhhHHhHHHhhhcCCEEEEEcccccccCCCCcc---cc-chHHHHhccee-ee-eEE-ecccccchHHHHHHHHHH
Q 024411 155 ENVGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEG---VH-NLMYLVSKRLR-ME-GFI-VLDHYHLYPKFLEMIIPH 227 (268)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~~-~~~~~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~ 227 (268)
|++|+.....++++++++|+++.+|............ .. ....+...... +. ... .+.......+.+.++.++
T Consensus 233 ~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (350)
T cd08248 233 DTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKL 312 (350)
T ss_pred ECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHH
Confidence 9999988899999999999999998643110000000 00 00011111110 00 000 000012236778999999
Q ss_pred HHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEE
Q 024411 228 IKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (268)
Q Consensus 228 ~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 265 (268)
+.++.+.+.+...+++++++++++.+.+++..+|++++
T Consensus 313 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 313 VEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 99999988777889999999999999988878888863
No 119
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.96 E-value=1.2e-26 Score=192.64 Aligned_cols=240 Identities=24% Similarity=0.266 Sum_probs=194.8
Q ss_pred CccceEEEEecCCCCCCCCCCeEE----------------------------e---ccccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVW----------------------------G---MTGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~----------------------------~---~g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.|++|+|..+|++++++++||+|+ + .|+|++|++++.+.++++ |++++
T Consensus 59 ~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~ 137 (330)
T cd08245 59 HEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLL-PDGLP 137 (330)
T ss_pred ccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEEC-CCCCC
Confidence 478999999999999999999997 3 278999999999999999 88854
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
.. +++.+.+.+.+||+++.. ..+.++++|+|+|+ |++|++++++++..|++|+++++++++.+.++ ++|++.+++.
T Consensus 138 ~~-~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 213 (330)
T cd08245 138 LA-QAAPLLCAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDS 213 (330)
T ss_pred HH-HhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEecc
Confidence 44 367788999999999965 68999999999975 77999999999999999999999999999997 8898877776
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEec
Q 024411 133 KEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (268)
... ..... ..+++|+++|+++. .....++++++++|+++.++..... ....+...++.++.++.++...
T Consensus 214 ~~~-~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 283 (330)
T cd08245 214 GAE-LDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMKRQSIAGSTHG 283 (330)
T ss_pred CCc-chHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhCCCEEEEeccC
Confidence 553 33222 22479999999885 7888999999999999999864321 1112234466677777776654
Q ss_pred ccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
. ...++++++++.++.+++ ....+++++++++++.+.+++..+|+|+
T Consensus 284 ~-----~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 284 G-----RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred C-----HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 3 567888899999999886 3467899999999999999998889875
No 120
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.96 E-value=1.4e-26 Score=192.08 Aligned_cols=234 Identities=21% Similarity=0.173 Sum_probs=189.9
Q ss_pred CccceEEEEecCCCCCCCCCCeEEe-------------------------------ccccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWG-------------------------------MTGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.+++|+|..+|+++.++++||+|+. .|+|++|+.++.+.++++ |++++
T Consensus 64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~ 142 (329)
T cd08298 64 HEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPI-PEDYD 142 (329)
T ss_pred ccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEEC-CCCCC
Confidence 4689999999999999999999975 278999999999999999 88854
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeec
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~ 132 (268)
.. .++.+++++.+||+++ ..++++++++++|+| +|++|++++++++..|++|+++++++++.+.++ ++|++.+++.
T Consensus 143 ~~-~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 218 (329)
T cd08298 143 DE-EAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDS 218 (329)
T ss_pred HH-HhhHhhhhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEecc
Confidence 44 3778999999999999 788999999999997 599999999999999999999999999999997 8998777766
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEec
Q 024411 133 KEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (268)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (268)
+. . ..+++|+++++.+. ..+..++++++++|+++.+|.... .....++.. +.++..+.+....
T Consensus 219 ~~--~--------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~~~~i~~~~~~ 282 (329)
T cd08298 219 DD--L--------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWGEKTIRSVANL 282 (329)
T ss_pred Cc--c--------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhCceEEEEecCC
Confidence 53 1 12379999998765 788999999999999998874221 111122222 3455555554332
Q ss_pred ccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
..+.++.+.+++.++.+++. ..+|+++++++|++.+.+++..||+|+
T Consensus 283 -----~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 283 -----TRQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred -----CHHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 25678889999999998874 468999999999999999999899874
No 121
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.96 E-value=8.2e-27 Score=192.72 Aligned_cols=230 Identities=18% Similarity=0.177 Sum_probs=182.2
Q ss_pred CCccceEEEEecCCCCCCCCCCeEEe-------------------------------ccccceeEeecCCcceeecCCCC
Q 024411 3 PISGYGVAKVLDSENPEFNKGDLVWG-------------------------------MTGWEEYSLITAPHLFKIQHTDV 51 (268)
Q Consensus 3 ~~~~~G~v~~vG~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~ 51 (268)
..+++|+|.++|++ +++||+|.+ .|+|++|++++.+.++++ |+++
T Consensus 55 G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~ 130 (319)
T cd08242 55 GHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVV-PDLV 130 (319)
T ss_pred CceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEEC-cCCC
Confidence 35789999999988 679999962 268999999999999999 8884
Q ss_pred CchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeee
Q 024411 52 PLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN 131 (268)
Q Consensus 52 ~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~ 131 (268)
+. +.+++..+..++|.++ ...+++++++|+|+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|++.+++
T Consensus 131 ~~--~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~ 205 (319)
T cd08242 131 PD--EQAVFAEPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLP 205 (319)
T ss_pred CH--HHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeC
Confidence 43 3333325556676665 667899999999997 599999999999999999999999999999999 799987776
Q ss_pred cCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEE
Q 024411 132 YKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (268)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (268)
++. . +.+ ++|+++||+|+ ..+..++++++++|+++..+.... ....+...++.++.++.+..
T Consensus 206 ~~~--~--------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~ 269 (319)
T cd08242 206 DEA--E--------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSR 269 (319)
T ss_pred ccc--c--------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEe
Confidence 643 1 233 89999999987 678899999999999998665321 12234455667788887765
Q ss_pred ecccccchHHHHHHHHHHHHcCCc--eeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 210 VLDHYHLYPKFLEMIIPHIKEGKL--VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~l--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
... ++++++++.++++ .+.+.+.|+++++++||+.+.++. .+|+|+++
T Consensus 270 ~~~--------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 270 CGP--------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred ccc--------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 432 6778899999998 456778999999999999998766 57998863
No 122
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2.4e-26 Score=191.15 Aligned_cols=258 Identities=25% Similarity=0.396 Sum_probs=205.2
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec---cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM---TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHG 80 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (268)
.+++|+|..+|+++.++++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++++..+||+++...+.++++
T Consensus 62 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~ 139 (337)
T cd08275 62 FECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPL-PDGMSFE-EAAAFPVNYLTAYYALFELGNLRPG 139 (337)
T ss_pred ceeEEEEEEECCCCcCCCCCCEEEEecCCCeeeeEEEecHHHeEEC-CCCCCHH-HHhhhhHHHHHHHHHHHHhhCCCCC
Confidence 46889999999999999999999997 78999999999999999 8874443 3677888999999999888889999
Q ss_pred cEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~-g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
++|+|+|++|++|++++++++.. +..++... .+++.+.++ .+|.+.+++.... ++...++..+++++|+++||+|+
T Consensus 140 ~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g~ 216 (337)
T cd08275 140 QSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGG 216 (337)
T ss_pred CEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCcH
Confidence 99999999999999999999998 43433332 455778887 8898888887765 77777777765589999999999
Q ss_pred hhHHhHHHhhhcCCEEEEEcccccccCCCC-----------ccccchHHHHhcceeeeeEEecccc---cchHHHHHHHH
Q 024411 160 KLLDAVLPNMKIRGRIAACGMISQYNLDKP-----------EGVHNLMYLVSKRLRMEGFIVLDHY---HLYPKFLEMII 225 (268)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 225 (268)
.....++++++++|+++.+|.....+.... .........+.+++++.++...... ......+.++.
T Consensus 217 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (337)
T cd08275 217 EDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLL 296 (337)
T ss_pred HHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHH
Confidence 888899999999999999986432110000 0112224557888888887754321 12234678888
Q ss_pred HHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEEEe
Q 024411 226 PHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (268)
Q Consensus 226 ~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 266 (268)
+++.++.+++.....|++++++++++.+.+++..+|+++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 297 KLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 99999999887778899999999999999988889999864
No 123
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=5e-26 Score=187.86 Aligned_cols=247 Identities=29% Similarity=0.325 Sum_probs=189.0
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSP 77 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~ 77 (268)
.+++|.|.++|++++.+++||+|+++ |+|++|..++.+.++++ |++++.. .++.+++++.+||+++.....+
T Consensus 64 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~ 141 (319)
T cd08267 64 MDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKK-PEGVSFE-EAAALPVAGLTALQALRDAGKV 141 (319)
T ss_pred ceeeEEEEEeCCCCCCCCCCCEEEEeccCCCCceeeEEEEechhheEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCC
Confidence 36789999999999999999999985 78999999999999999 8885444 4778899999999999888789
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFEN 156 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~ 156 (268)
+++++++|+|++|++|++++++++..|++|++++++ ++.+.++ ++|.+++++.... ++. ...+.+ ++|+++||
T Consensus 142 ~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~ 215 (319)
T cd08267 142 KPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDA 215 (319)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEEC
Confidence 999999999999999999999999999999999864 7888887 8998878876654 443 333444 89999999
Q ss_pred CCh--hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCce
Q 024411 157 VGG--KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV 234 (268)
Q Consensus 157 ~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 234 (268)
+|+ ......+..++++|+++.+|........ ...... .........+...... . ..+.+.++.+++.++.++
T Consensus 216 ~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~~~~ 289 (319)
T cd08267 216 VGNSPFSLYRASLALKPGGRYVSVGGGPSGLLL-VLLLLP-LTLGGGGRRLKFFLAK--P--NAEDLEQLAELVEEGKLK 289 (319)
T ss_pred CCchHHHHHHhhhccCCCCEEEEeccccccccc-cccccc-hhhccccceEEEEEec--C--CHHHHHHHHHHHHCCCee
Confidence 995 3334444459999999999874321100 000000 0111111222222211 1 167888999999999998
Q ss_pred eeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
+.+...++++++++|++.+.++...+|+++
T Consensus 290 ~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 290 PVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred eeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 888889999999999999998877788874
No 124
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.95 E-value=5.8e-26 Score=186.38 Aligned_cols=211 Identities=24% Similarity=0.331 Sum_probs=175.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec-------------------------------cccceeEeecCCcceeecCCCCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM-------------------------------TGWEEYSLITAPHLFKIQHTDVP 52 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~ 52 (268)
.+++|+|+.+|++++.+++||+|++. |+|++|++++.+.++++ |++++
T Consensus 61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~ 139 (306)
T cd08258 61 HEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHEL-PENLS 139 (306)
T ss_pred cceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEEC-cCCCC
Confidence 46789999999999999999999873 78999999999999999 98844
Q ss_pred chhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHhcCCCeee
Q 024411 53 LSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSA--GSKDKVDLLKNKFGFDEAF 130 (268)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~--~~~~~~~~~~~~~g~~~v~ 130 (268)
. +.++++..+.+||+++...++++++++|+|.| +|++|++++|+|+..|++|+.++ +++++.+.++ ++|++++
T Consensus 140 ~--~~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~- 214 (306)
T cd08258 140 L--EAAALTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV- 214 (306)
T ss_pred H--HHHHhhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-
Confidence 4 44458888999999998888999999999976 59999999999999999988773 3445677777 8998777
Q ss_pred ecCChhhHHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeE
Q 024411 131 NYKEEADLNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGF 208 (268)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (268)
++... ++...+....++ ++|+++|+.|+ ..+...+++++++|+++.+|..++ .....+...++.+++++.|+
T Consensus 215 ~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~ 288 (306)
T cd08258 215 NGGEE-DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGS 288 (306)
T ss_pred CCCcC-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEE
Confidence 77665 788888877766 89999999986 788899999999999999988542 11234556777899999998
Q ss_pred EecccccchHHHHHHHHHHHHcC
Q 024411 209 IVLDHYHLYPKFLEMIIPHIKEG 231 (268)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~g 231 (268)
..++ .++++++++++++|
T Consensus 289 ~~~~-----~~~~~~~~~~~~~~ 306 (306)
T cd08258 289 RSST-----PASWETALRLLASG 306 (306)
T ss_pred ecCc-----hHhHHHHHHHHhcC
Confidence 8866 66788888888765
No 125
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.95 E-value=1.2e-25 Score=184.59 Aligned_cols=238 Identities=28% Similarity=0.383 Sum_probs=195.3
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------cccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCC
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------TGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSP 77 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~ 77 (268)
.+++|.|+.+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. .++.+++...++++++.....+
T Consensus 65 ~e~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~ 142 (309)
T cd05289 65 HDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALK-PANLSFE-EAAALPLAGLTAWQALFELGGL 142 (309)
T ss_pred cceeEEEEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccC-CCCCCHH-HHHhhhHHHHHHHHHHHhhcCC
Confidence 46789999999999999999999985 69999999999999999 8885444 3677888899999999887779
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFEN 156 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~ 156 (268)
.++++++|+|++|++|++++++++..|++|+++++++ +.+.++ .+|.+.+++.... ++.. ...+ ++|+++|+
T Consensus 143 ~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~----~~~~~~~d~v~~~ 215 (309)
T cd05289 143 KAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER----AAAPGGVDAVLDT 215 (309)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh----ccCCCCceEEEEC
Confidence 9999999999999999999999999999999998777 778787 8888777776654 4433 2333 79999999
Q ss_pred CChhhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceee
Q 024411 157 VGGKLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV 236 (268)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 236 (268)
+++.....++++++++|+++.+|.... . .. ..+.+++++....... . .+.+.++.+++.++.+.+.
T Consensus 216 ~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~--~~---~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~ 281 (309)
T cd05289 216 VGGETLARSLALVKPGGRLVSIAGPPP-----A--EQ---AAKRRGVRAGFVFVEP---D-GEQLAELAELVEAGKLRPV 281 (309)
T ss_pred CchHHHHHHHHHHhcCcEEEEEcCCCc-----c--hh---hhhhccceEEEEEecc---c-HHHHHHHHHHHHCCCEEEe
Confidence 999888999999999999999986321 0 00 3345566665554322 1 5678889999999999887
Q ss_pred eehhcccccHHHHHHHHHcCCccceEEE
Q 024411 237 EDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 237 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
+...+++++++++++.+.++...+|+++
T Consensus 282 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 282 VDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 7788999999999999998877788774
No 126
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.94 E-value=7.3e-25 Score=176.73 Aligned_cols=208 Identities=29% Similarity=0.399 Sum_probs=170.5
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec--------------------------cccceeEeecCCcceeecCCCCCchhhh
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM--------------------------TGWEEYSLITAPHLFKIQHTDVPLSYYT 57 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~--------------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~ 57 (268)
.+++|+|.++|++++.|++||+|+++ |+|++|+.++.+.++++ |++++.. ++
T Consensus 35 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a 112 (271)
T cd05188 35 HEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPL-PDGLSLE-EA 112 (271)
T ss_pred cccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCEeccccCCcceEEEEechHHeEEC-CCCCCHH-Hh
Confidence 46789999999999999999999973 68999999999999999 8885444 37
Q ss_pred hhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhh
Q 024411 58 GILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD 137 (268)
Q Consensus 58 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 137 (268)
+.++.++.+||+++.....+.++++|+|+|+++ +|++++++++..|.+|+++++++++.+.++ ++|.+.+++.... .
T Consensus 113 ~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~ 189 (271)
T cd05188 113 ALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-D 189 (271)
T ss_pred hHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC-C
Confidence 788899999999998887779999999999866 999999999999999999999999999988 8888888877765 5
Q ss_pred HHHHHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEeccccc
Q 024411 138 LNAALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH 215 (268)
Q Consensus 138 ~~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (268)
....+. ...+ ++|+++|+++. ..+...+++++++|+++.++..... .........+.+++++.++....
T Consensus 190 ~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--- 260 (271)
T cd05188 190 LEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGG-----PPLDDLRRLLFKELTIIGSTGGT--- 260 (271)
T ss_pred HHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCC-----CCcccHHHHHhcceEEEEeecCC---
Confidence 666665 4444 89999999998 8889999999999999999875421 11122446678899999988765
Q ss_pred chHHHHHHHHHH
Q 024411 216 LYPKFLEMIIPH 227 (268)
Q Consensus 216 ~~~~~~~~~~~~ 227 (268)
...+++++++
T Consensus 261 --~~~~~~~~~~ 270 (271)
T cd05188 261 --REDFEEALDL 270 (271)
T ss_pred --HHHHHHHHhh
Confidence 3445555443
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.80 E-value=2.4e-18 Score=123.41 Aligned_cols=127 Identities=25% Similarity=0.440 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCCC-hhhHHhHHHh
Q 024411 91 AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVG-GKLLDAVLPN 168 (268)
Q Consensus 91 ~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g-~~~~~~~~~~ 168 (268)
++|++++|+|+++|++|+++++++++.+.++ ++|+++++++++. ++.+++++.+++ ++|++|||+| ...+..++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~ 78 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL 78 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence 5899999999999999999999999999999 9999999999987 899999999988 9999999999 5899999999
Q ss_pred hhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHHHHHHHHH
Q 024411 169 MKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIK 229 (268)
Q Consensus 169 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (268)
++++|+++.+|... ......+...++.+++++.++..++ .+.+++++++++
T Consensus 79 l~~~G~~v~vg~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la 129 (130)
T PF00107_consen 79 LRPGGRIVVVGVYG-----GDPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA 129 (130)
T ss_dssp EEEEEEEEEESSTS-----TSEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred hccCCEEEEEEccC-----CCCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence 99999999999854 2345667889999999999999877 677777777765
No 128
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.66 E-value=3.7e-16 Score=111.54 Aligned_cols=122 Identities=30% Similarity=0.341 Sum_probs=80.9
Q ss_pred cCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC--hhhH-HhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHh
Q 024411 124 FGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG--GKLL-DAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS 200 (268)
Q Consensus 124 ~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 200 (268)
+|+++++||+.. ++ ..++++|+|||++| ++.+ ..++++| ++|+++.++.. ........
T Consensus 1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~-----------~~~~~~~~ 61 (127)
T PF13602_consen 1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGD-----------LPSFARRL 61 (127)
T ss_dssp CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SH-----------HHHHHHHH
T ss_pred CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCc-----------ccchhhhh
Confidence 689999999975 55 23458999999999 7544 8888999 99999988640 00111111
Q ss_pred cceeeeeEEecccc--cchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCCccceEEE
Q 024411 201 KRLRMEGFIVLDHY--HLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (268)
Q Consensus 201 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 264 (268)
+...+......... ....+.++++.+++.+|+++|.+.++|||+++++|++.+++++..||+|+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 12222222221111 12456799999999999999999999999999999999999999999996
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.47 E-value=1.7e-12 Score=108.69 Aligned_cols=175 Identities=13% Similarity=0.088 Sum_probs=128.7
Q ss_pred HHHHHhhhhcC-CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHH
Q 024411 66 TAYVGFYEVCS-PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKR 144 (268)
Q Consensus 66 ~a~~~l~~~~~-~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 144 (268)
.+|.++.+..+ ..+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.+.+.++ .+|+.. ++ ..+.+
T Consensus 187 s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~-~~------~~e~v-- 255 (413)
T cd00401 187 SLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEV-MT------MEEAV-- 255 (413)
T ss_pred hhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEE-cc------HHHHH--
Confidence 34555555444 368999999997 99999999999999999999999999999998 888742 21 11122
Q ss_pred HCCCCccEEEeCCCh-hhHHhH-HHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHHHH
Q 024411 145 YFPEGIDIYFENVGG-KLLDAV-LPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLE 222 (268)
Q Consensus 145 ~~~~~~d~v~d~~g~-~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (268)
.++|++++|+|. ..+... ++.++++|+++.+|.. ...++...+..+++++.++..+.. ...++
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~ 320 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELP 320 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcC
Confidence 248999999998 556655 9999999999999852 224566677778888887766431 11233
Q ss_pred --HHHHHHHcCCc---eeeeehh-----cccc-cHHHHHHHHHcCCc-cceEEEEe
Q 024411 223 --MIIPHIKEGKL---VYVEDMA-----EGLE-SAPAALIGLFSGQN-VGKQVVAV 266 (268)
Q Consensus 223 --~~~~~~~~g~l---~~~~~~~-----~~~~-~~~~a~~~~~~~~~-~gkvvi~~ 266 (268)
..+.++.+|.+ .+.+.+. ++|+ ++.+++..+.++.. ..|+++.+
T Consensus 321 ~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p 376 (413)
T cd00401 321 DGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP 376 (413)
T ss_pred CcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence 57889999988 3445555 6788 99999999987654 24666654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.34 E-value=4.7e-11 Score=102.68 Aligned_cols=149 Identities=15% Similarity=0.105 Sum_probs=105.4
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-eecCCh------------hhHHHHHH
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEE------------ADLNAALK 143 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~~------------~~~~~~~~ 143 (268)
..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++.+.++ ++|++.+ +|..+. .++.+..+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 467999999998 99999999999999999999999999999999 8999843 554321 02222322
Q ss_pred HH-CC--CCccEEEeCCChh------h-HHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHh-cceeeeeEEecc
Q 024411 144 RY-FP--EGIDIYFENVGGK------L-LDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS-KRLRMEGFIVLD 212 (268)
Q Consensus 144 ~~-~~--~~~d~v~d~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 212 (268)
+. .. +++|++|+|++.+ . .+++++.++++|+++.++...+.+... ......++. +++++.|.....
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~---t~~~~~v~~~~gVti~Gv~n~P 316 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCEL---TVPGEVVVTDNGVTIIGYTDLP 316 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCccc---ccCccceEeECCEEEEEeCCCc
Confidence 32 22 3699999999952 3 489999999999999998743221111 111223444 788888765322
Q ss_pred cccchHHHHHHHHHHHHcCCcee
Q 024411 213 HYHLYPKFLEMIIPHIKEGKLVY 235 (268)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~g~l~~ 235 (268)
.+.-.+..+++.++.+..
T Consensus 317 -----~~~p~~As~lla~~~i~l 334 (509)
T PRK09424 317 -----SRLPTQSSQLYGTNLVNL 334 (509)
T ss_pred -----hhHHHHHHHHHHhCCccH
Confidence 344445788888887653
No 131
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.78 E-value=5.5e-07 Score=72.54 Aligned_cols=165 Identities=18% Similarity=0.203 Sum_probs=107.4
Q ss_pred CccceEEEEecCCCCCCCCCCeEEeccc------------------------------cceeEeecCCcceeecCCCCCc
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGMTG------------------------------WEEYSLITAPHLFKIQHTDVPL 53 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~g~------------------------------~~~~~~v~~~~~~~~~p~~~~~ 53 (268)
||.-|...++.|++..+.+|+||+|+=. |..|.++..+..+. |+ .
T Consensus 33 vPvWGfA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~--~~---~ 107 (314)
T PF11017_consen 33 VPVWGFATVVESRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD--PE---R 107 (314)
T ss_pred cccceEEEEEeeCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC--cc---h
Confidence 6778888999999999999999999822 34444444433221 11 1
Q ss_pred hhhhhhccchHHHHHHHhhhhc--CCCCCcEEEEecCcchHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHhcCC-Ce
Q 024411 54 SYYTGILGMPGMTAYVGFYEVC--SPKHGECVFISAASGAVGQLVGQFAK--LLGCYVVGSAGSKDKVDLLKNKFGF-DE 128 (268)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~--~~~~~~~vlI~ga~g~~G~~~i~l~~--~~g~~V~~~~~~~~~~~~~~~~~g~-~~ 128 (268)
....+.+-..+.|.|.+-+... ..-..+.|+|..|++-+++.++.+++ ..+.+++.++ |..+..+.+ .+|. +.
T Consensus 108 e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Yd~ 185 (314)
T PF11017_consen 108 EDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCYDE 185 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCceE
Confidence 1112333334556654432221 13345789999998989999998888 3345999999 666677777 8887 67
Q ss_pred eeecCChhhHHHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCC-EEEEEcccc
Q 024411 129 AFNYKEEADLNAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRG-RIAACGMIS 182 (268)
Q Consensus 129 v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G-~~v~~g~~~ 182 (268)
|+.|++ +.++....--+++|+.|+ .......++++..= ..+.+|...
T Consensus 186 V~~Yd~-------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 186 VLTYDD-------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred Eeehhh-------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 887764 333323456789999998 56666667777643 456666543
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.58 E-value=8.1e-07 Score=71.80 Aligned_cols=168 Identities=15% Similarity=0.175 Sum_probs=99.4
Q ss_pred cCCCCCcEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHh---cCCCeeeecCChhhHHHHHHHHC--C
Q 024411 75 CSPKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYF--P 147 (268)
Q Consensus 75 ~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~--~ 147 (268)
+.+.++++||.+|+ |+ |..+.++++..+. +|++++.+++..+.+++. .+...+ ..... + +.+.. .
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d----~~~l~~~~ 144 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-E----IEALPVAD 144 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-c----hhhCCCCC
Confidence 56789999999996 55 8888888888775 799999999988888732 233322 11111 2 22222 2
Q ss_pred CCccEEEeCC------Ch-hhHHhHHHhhhcCCEEEEEcccccccCCCCccccchHHHHhcceeeeeEEecccccchHHH
Q 024411 148 EGIDIYFENV------GG-KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF 220 (268)
Q Consensus 148 ~~~d~v~d~~------g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (268)
+.||+|+... .. ..+..+.+.|+|+|+++..+..... . . ...+.+...+.+....... .
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-----~--~--~~~~~~~~~~~~~~~~~~~-----~ 210 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-----E--L--PEEIRNDAELYAGCVAGAL-----Q 210 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-----C--C--CHHHHHhHHHHhccccCCC-----C
Confidence 3799988543 22 5689999999999999987653211 0 0 1111222222211111111 1
Q ss_pred HHHHHHHHHcCCc---eeeeehhcccccHHHHHHHH--HcCCccceEEE
Q 024411 221 LEMIIPHIKEGKL---VYVEDMAEGLESAPAALIGL--FSGQNVGKQVV 264 (268)
Q Consensus 221 ~~~~~~~~~~g~l---~~~~~~~~~~~~~~~a~~~~--~~~~~~gkvvi 264 (268)
.+++.+++.+..+ .......+++++..++++.+ .++...++.+.
T Consensus 211 ~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 259 (272)
T PRK11873 211 EEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV 259 (272)
T ss_pred HHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence 2334455555322 33344567889999999988 55554455544
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.53 E-value=1e-06 Score=76.00 Aligned_cols=104 Identities=20% Similarity=0.260 Sum_probs=78.6
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCCh------------hhHHHHHHH
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEE------------ADLNAALKR 144 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~------------~~~~~~~~~ 144 (268)
.++++++|+|+ |.+|+.+++.++.+|++|++.+.++++.+.++ ++|... .++..+. +++.+...+
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 45789999998 99999999999999999999999999999998 888865 2332110 023332233
Q ss_pred HCC---CCccEEEeCC---Ch--h--hHHhHHHhhhcCCEEEEEccccc
Q 024411 145 YFP---EGIDIYFENV---GG--K--LLDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 145 ~~~---~~~d~v~d~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
... .++|++++|+ |. + ..+..++.+++++.+|.++...+
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence 222 2699999999 54 2 45788999999999999876443
No 134
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.47 E-value=1.5e-06 Score=67.00 Aligned_cols=81 Identities=26% Similarity=0.392 Sum_probs=64.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----CeeeecCChhhHHHHHHHHCCC--CccE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEADLNAALKRYFPE--GIDI 152 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~~~~--~~d~ 152 (268)
+++.++|+||++|+|.+.++.+...|++|+.+.|+.++++.+.++++. ...+|..+.++....+...... .+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 457899999999999999999999999999999999999998878883 2355666543444455544333 6999
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
+++.+|-
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9999984
No 135
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=98.46 E-value=1.9e-07 Score=64.46 Aligned_cols=43 Identities=28% Similarity=0.460 Sum_probs=37.0
Q ss_pred CccceEEEEecCCCCCCCCCCeEEec------------------------------cccceeEeecCCcceee
Q 024411 4 ISGYGVAKVLDSENPEFNKGDLVWGM------------------------------TGWEEYSLITAPHLFKI 46 (268)
Q Consensus 4 ~~~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~ 46 (268)
-|++|+|+++|+++++|++||+|.+. |+|+||++++++.++++
T Consensus 37 hE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 37 HEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred cceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 57799999999999999999999763 78999999998888764
No 136
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.38 E-value=5.6e-06 Score=70.15 Aligned_cols=104 Identities=20% Similarity=0.207 Sum_probs=77.9
Q ss_pred HHHHHHhhhhcCCC-CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHH
Q 024411 65 MTAYVGFYEVCSPK-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALK 143 (268)
Q Consensus 65 ~~a~~~l~~~~~~~-~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 143 (268)
-.+|+++.+..++. .+++++|.|. |.+|..+++.++.+|++|++++.++.+...+. ..|.. +. ++.+.+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal- 265 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAA- 265 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHH-
Confidence 34566665554544 8999999997 99999999999999999999998887766665 55543 22 222222
Q ss_pred HHCCCCccEEEeCCCh-hhHH-hHHHhhhcCCEEEEEcccc
Q 024411 144 RYFPEGIDIYFENVGG-KLLD-AVLPNMKIRGRIAACGMIS 182 (268)
Q Consensus 144 ~~~~~~~d~v~d~~g~-~~~~-~~~~~l~~~G~~v~~g~~~ 182 (268)
.++|++++++|. ..+. ..+..+++++.++..|..+
T Consensus 266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 266 ----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred ----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 258999999998 4454 6788899999999988744
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.30 E-value=1.4e-05 Score=67.43 Aligned_cols=102 Identities=19% Similarity=0.231 Sum_probs=75.9
Q ss_pred HHHHHhhhhcC-CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHH
Q 024411 66 TAYVGFYEVCS-PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKR 144 (268)
Q Consensus 66 ~a~~~l~~~~~-~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 144 (268)
.++.++.+..+ ...|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+. ..|. .+.+ ..+.+
T Consensus 180 s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~-~v~~------leeal-- 248 (406)
T TIGR00936 180 STIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGF-RVMT------MEEAA-- 248 (406)
T ss_pred hHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCC-EeCC------HHHHH--
Confidence 34455544434 368999999997 99999999999999999999988887766666 5565 2321 22222
Q ss_pred HCCCCccEEEeCCCh-hhHH-hHHHhhhcCCEEEEEccc
Q 024411 145 YFPEGIDIYFENVGG-KLLD-AVLPNMKIRGRIAACGMI 181 (268)
Q Consensus 145 ~~~~~~d~v~d~~g~-~~~~-~~~~~l~~~G~~v~~g~~ 181 (268)
.+.|++++++|. ..+. ..+..+++++.++.+|..
T Consensus 249 ---~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 249 ---KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred ---hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 247999999998 4455 488899999999998774
No 138
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.27 E-value=3e-05 Score=65.23 Aligned_cols=98 Identities=22% Similarity=0.268 Sum_probs=70.0
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCC--
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENV-- 157 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~-- 157 (268)
+.+++|+|+ |.+|+.+++.++.+|++|+++++++++.+.+.+.++......+...+.+.+.+. .+|++++|+
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence 455899997 999999999999999999999999888777763555432222222213333332 489999997
Q ss_pred -Ch--h--hHHhHHHhhhcCCEEEEEccccc
Q 024411 158 -GG--K--LLDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 158 -g~--~--~~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
+. + .....++.+++++.++.++...+
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~G 271 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQG 271 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCC
Confidence 32 2 23677888999999999886443
No 139
>PLN02494 adenosylhomocysteinase
Probab=98.26 E-value=1.6e-05 Score=67.73 Aligned_cols=101 Identities=18% Similarity=0.186 Sum_probs=76.6
Q ss_pred HHHHhhhhcCC-CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHH
Q 024411 67 AYVGFYEVCSP-KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRY 145 (268)
Q Consensus 67 a~~~l~~~~~~-~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 145 (268)
.+.++.+..++ -.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|.. ++ .+.+.++
T Consensus 240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~-vv------~leEal~-- 308 (477)
T PLN02494 240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQ-VL------TLEDVVS-- 308 (477)
T ss_pred HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCe-ec------cHHHHHh--
Confidence 35555555443 57999999997 99999999999999999999988877665665 55654 22 2222232
Q ss_pred CCCCccEEEeCCChhh--HHhHHHhhhcCCEEEEEccc
Q 024411 146 FPEGIDIYFENVGGKL--LDAVLPNMKIRGRIAACGMI 181 (268)
Q Consensus 146 ~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~ 181 (268)
..|+++++.|... ....+..+++++.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 3899999999843 37899999999999999873
No 140
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.21 E-value=3.5e-05 Score=62.88 Aligned_cols=92 Identities=24% Similarity=0.359 Sum_probs=71.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
.+++++|+|. |.+|+.+++.++.+|++|++.++++++.+.+. ++|... +.+. ++.+.+. .+|++|++++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~-~~~~---~l~~~l~-----~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSP-FHLS---ELAEEVG-----KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCee-ecHH---HHHHHhC-----CCCEEEECCC
Confidence 5889999997 99999999999999999999999988877777 777642 2111 2222222 4999999988
Q ss_pred hh-hHHhHHHhhhcCCEEEEEccc
Q 024411 159 GK-LLDAVLPNMKIRGRIAACGMI 181 (268)
Q Consensus 159 ~~-~~~~~~~~l~~~G~~v~~g~~ 181 (268)
.. .....++.+++++.++.++..
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~ 243 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASK 243 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccC
Confidence 64 345677889999999988763
No 141
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.15 E-value=4.1e-05 Score=61.04 Aligned_cols=143 Identities=17% Similarity=0.240 Sum_probs=91.6
Q ss_pred CCCCCCCCCeEEeccccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHH
Q 024411 16 ENPEFNKGDLVWGMTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQL 95 (268)
Q Consensus 16 ~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~ 95 (268)
..+.+++||+++...+|.+|.. +...++.+ +++ +++..+..+... .....+.. .+.++.+||-.|+ |. |..
T Consensus 63 ~~~p~~~g~~~~i~p~~~~~~~-~~~~~i~i-~p~--~afgtg~h~tt~-~~l~~l~~--~~~~~~~VLDiGc-Gs-G~l 133 (250)
T PRK00517 63 YFHPIRIGDRLWIVPSWEDPPD-PDEINIEL-DPG--MAFGTGTHPTTR-LCLEALEK--LVLPGKTVLDVGC-GS-GIL 133 (250)
T ss_pred HCCCEEEcCCEEEECCCcCCCC-CCeEEEEE-CCC--CccCCCCCHHHH-HHHHHHHh--hcCCCCEEEEeCC-cH-HHH
Confidence 4566889999998888998865 66678888 444 443222222211 12223322 2568899999997 54 877
Q ss_pred HHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCee---eecCChhhHHHHHHHHCCC-CccEEEeCCCh----hhHHhHH
Q 024411 96 VGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEA---FNYKEEADLNAALKRYFPE-GIDIYFENVGG----KLLDAVL 166 (268)
Q Consensus 96 ~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~----~~~~~~~ 166 (268)
++.+++ .|+ +|++++.++...+.+++......+ +.... +. .||+|+..... ..+..+.
T Consensus 134 ~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~------------~~~~fD~Vvani~~~~~~~l~~~~~ 200 (250)
T PRK00517 134 AIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ------------GDLKADVIVANILANPLLELAPDLA 200 (250)
T ss_pred HHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc------------CCCCcCEEEEcCcHHHHHHHHHHHH
Confidence 776554 566 699999999888877633221111 11111 11 59999876553 2456788
Q ss_pred HhhhcCCEEEEEcc
Q 024411 167 PNMKIRGRIAACGM 180 (268)
Q Consensus 167 ~~l~~~G~~v~~g~ 180 (268)
+.|+|+|+++..|.
T Consensus 201 ~~LkpgG~lilsgi 214 (250)
T PRK00517 201 RLLKPGGRLILSGI 214 (250)
T ss_pred HhcCCCcEEEEEEC
Confidence 89999999998765
No 142
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.15 E-value=2.4e-05 Score=62.00 Aligned_cols=82 Identities=21% Similarity=0.288 Sum_probs=60.8
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-----ee--eecCChhhHHHHHHH-HC-C
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-----EA--FNYKEEADLNAALKR-YF-P 147 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-----~v--~~~~~~~~~~~~~~~-~~-~ 147 (268)
...+.+++|+||++|+|...+..+...|.+|+.+.|+.++++.+.+++.-. ++ .|..+. +-...+.+ .. .
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhc
Confidence 346789999999999999999999999999999999999988776555421 22 355554 33333333 22 2
Q ss_pred C-CccEEEeCCCh
Q 024411 148 E-GIDIYFENVGG 159 (268)
Q Consensus 148 ~-~~d~v~d~~g~ 159 (268)
+ .+|+.++++|-
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 2 79999999983
No 143
>PRK08324 short chain dehydrogenase; Validated
Probab=98.13 E-value=4e-05 Score=69.95 Aligned_cols=106 Identities=21% Similarity=0.256 Sum_probs=72.3
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C---eeeecCChhhHHHHHHHHC--CCCc
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D---EAFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+++++||+||+|++|..+++.+...|++|++++++.++.+.+.+.++. . ...|..+.+.....+.+.. .+++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i 499 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV 499 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3678999999999999999999999999999999998877666534443 1 1234444323333333321 2379
Q ss_pred cEEEeCCCh--------------------------hhHHhHHHhhhc---CCEEEEEccccc
Q 024411 151 DIYFENVGG--------------------------KLLDAVLPNMKI---RGRIAACGMISQ 183 (268)
Q Consensus 151 d~v~d~~g~--------------------------~~~~~~~~~l~~---~G~~v~~g~~~~ 183 (268)
|++++++|. ..++.+++.++. +|+++.+++...
T Consensus 500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~ 561 (681)
T PRK08324 500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA 561 (681)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence 999999982 113344555655 588999887543
No 144
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.11 E-value=4.7e-05 Score=60.09 Aligned_cols=104 Identities=21% Similarity=0.202 Sum_probs=69.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC---CCee--eecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG---FDEA--FNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g---~~~v--~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
.+++++|+|++|++|..+++.+...|++|+.+++++++.+.+.+... ..+. .|..+.+.....+++.. -+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35799999999999999999999999999999999887766532332 1122 23333313333333221 13689
Q ss_pred EEEeCCChh------------------------hHHhHHHhhhcCCEEEEEcccc
Q 024411 152 IYFENVGGK------------------------LLDAVLPNMKIRGRIAACGMIS 182 (268)
Q Consensus 152 ~v~d~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~ 182 (268)
.++.+++.. .+...+++++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 999888731 1334455666788898887654
No 145
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.10 E-value=2.8e-05 Score=58.30 Aligned_cols=79 Identities=18% Similarity=0.302 Sum_probs=57.7
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeeecCChhh---HHHHHHHHCCCCccEEE
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEAD---LNAALKRYFPEGIDIYF 154 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~---~~~~~~~~~~~~~d~v~ 154 (268)
|.+|||+||++|+|+..++-...+|-+|++..|++++++.++.+... ..+.|..+.++ +...+....+ ..++++
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvli 83 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVLI 83 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chheee
Confidence 57899999999999999999999999999999999999998833322 23444444312 3334433222 578999
Q ss_pred eCCCh
Q 024411 155 ENVGG 159 (268)
Q Consensus 155 d~~g~ 159 (268)
+++|-
T Consensus 84 NNAGI 88 (245)
T COG3967 84 NNAGI 88 (245)
T ss_pred ecccc
Confidence 98873
No 146
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.07 E-value=0.00011 Score=59.42 Aligned_cols=77 Identities=23% Similarity=0.380 Sum_probs=56.2
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhHHHHHHHHC--CCCccEEEeCC
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDIYFENV 157 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v~d~~ 157 (268)
+++||+||+|++|..+++.+...|++|++++++.++.+.+. ..+... ..|..+.+.+.+.+.... .+++|++++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999999999999999999888777665 444432 245555323443333332 23699999998
Q ss_pred C
Q 024411 158 G 158 (268)
Q Consensus 158 g 158 (268)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 8
No 147
>PRK12742 oxidoreductase; Provisional
Probab=98.07 E-value=0.00012 Score=57.72 Aligned_cols=102 Identities=20% Similarity=0.221 Sum_probs=66.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcCCCee-eecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~-~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
.++++||+||+|++|..+++.+...|++|+.+.+ ++++.+.+.++.+...+ .|..+.+.+.+.+.+. +++|+++++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 4679999999999999999999999999988764 45555554435554322 3443331333333322 368999999
Q ss_pred CChhh--------------------------HHhHHHhhhcCCEEEEEcccc
Q 024411 157 VGGKL--------------------------LDAVLPNMKIRGRIAACGMIS 182 (268)
Q Consensus 157 ~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~ 182 (268)
+|... ...+.+.++..|+++.++...
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 87410 123334455678999887644
No 148
>PRK06182 short chain dehydrogenase; Validated
Probab=98.04 E-value=0.00012 Score=59.20 Aligned_cols=80 Identities=24% Similarity=0.392 Sum_probs=57.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhHHHHHHHHC--CCCccEEEe
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDIYFE 155 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v~d 155 (268)
++++++|+|++|++|..+++.+...|++|+++++++++.+.+. ..+... ..|..+.+.+...+.+.. .+++|++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3578999999999999999999999999999999988776665 444432 345555423433343321 237999999
Q ss_pred CCCh
Q 024411 156 NVGG 159 (268)
Q Consensus 156 ~~g~ 159 (268)
++|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9873
No 149
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.01 E-value=9.2e-05 Score=53.07 Aligned_cols=93 Identities=20% Similarity=0.250 Sum_probs=62.9
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC--eeeecCChhhHHHHHHHHCCCCccEEEe
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDIYFE 155 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~v~d 155 (268)
++.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.. ..+++. ++...+. .+|++++
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~-----~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQ-----EADIVIN 81 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHH-----TESEEEE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHh-----hCCeEEE
Confidence 5789999998 9999999999999999 5999999999888877577432 244444 3333333 4999999
Q ss_pred CCChhhHHhHHHhhhcC----CEEEEEcc
Q 024411 156 NVGGKLLDAVLPNMKIR----GRIAACGM 180 (268)
Q Consensus 156 ~~g~~~~~~~~~~l~~~----G~~v~~g~ 180 (268)
|++.......-..+... +.++.++.
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred ecCCCCcccCHHHHHHHHhhhhceecccc
Confidence 98863222222223332 46666654
No 150
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.00 E-value=6.8e-05 Score=61.72 Aligned_cols=107 Identities=17% Similarity=0.192 Sum_probs=71.2
Q ss_pred ceeecCCCCCchhhhhhccchHHHHHHHhhhhcCC---CCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 024411 43 LFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSP---KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVD 118 (268)
Q Consensus 43 ~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~---~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~ 118 (268)
++++ |+. +..+.+....+..++++++...... .++.+|+|.|+ |.+|..+++.++..|+ +|+++.+++++..
T Consensus 141 a~~~-~k~--vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 141 AIKV-GKR--VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHH-HHH--HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 4555 555 4333444445666777776433221 47899999997 9999999999998775 8999999988764
Q ss_pred HHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCChhhH
Q 024411 119 LLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLL 162 (268)
Q Consensus 119 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 162 (268)
.+.+++|.. +++.. ++.+.+. .+|+|+.|++.+..
T Consensus 217 ~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence 444378763 33321 3333332 48999999998443
No 151
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.98 E-value=0.00018 Score=57.76 Aligned_cols=80 Identities=15% Similarity=0.174 Sum_probs=56.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
.+++++|+||+|++|..++..+...|++|++++++.++.+.+.++++.. . ..|..+.+++.+.+.+.. .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4679999999999999999999999999999999887766655355432 1 234444323333333321 1368999
Q ss_pred EeCCC
Q 024411 154 FENVG 158 (268)
Q Consensus 154 ~d~~g 158 (268)
+.++|
T Consensus 85 v~~ag 89 (261)
T PRK08265 85 VNLAC 89 (261)
T ss_pred EECCC
Confidence 99887
No 152
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.94 E-value=0.00015 Score=58.80 Aligned_cols=79 Identities=18% Similarity=0.312 Sum_probs=57.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhHHHHHH---HHCCCCccEEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALK---RYFPEGIDIYF 154 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~---~~~~~~~d~v~ 154 (268)
.+++++|+||+|++|..+++.+...|++|+++++++++.+.+. ..+... ..|..+.+++...+. +..++.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4578999999999999999999999999999999988887776 445432 235554323333333 22335799999
Q ss_pred eCCC
Q 024411 155 ENVG 158 (268)
Q Consensus 155 d~~g 158 (268)
+++|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
No 153
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.92 E-value=0.00027 Score=60.62 Aligned_cols=91 Identities=20% Similarity=0.232 Sum_probs=70.0
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
.-.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|.. +. ++.+.++ ..|+++.+
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~-~~------~leell~-----~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQ-VV------TLEDVVE-----TADIFVTA 316 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCce-ec------cHHHHHh-----cCCEEEEC
Confidence 457999999997 99999999999999999999987776655555 44542 22 2222232 48999999
Q ss_pred CChh-hH-HhHHHhhhcCCEEEEEccc
Q 024411 157 VGGK-LL-DAVLPNMKIRGRIAACGMI 181 (268)
Q Consensus 157 ~g~~-~~-~~~~~~l~~~G~~v~~g~~ 181 (268)
+|.. .+ ...+..+++++.++.+|..
T Consensus 317 tGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred CCcccccCHHHHhccCCCcEEEEcCCC
Confidence 9874 44 4799999999999999864
No 154
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.91 E-value=0.0002 Score=57.32 Aligned_cols=106 Identities=25% Similarity=0.342 Sum_probs=73.2
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-e----eecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE-A----FNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~~-v----~~~~~~~~~~~~~~~~~--~~ 148 (268)
.++.|+|+||++|+|..++.-.-..|++++.+++..++.+.+.+ +.+... + .|..+.++..+.+.+.. .|
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 57889999999999999999899999998888887776665521 333332 2 24444324444443322 34
Q ss_pred CccEEEeCCChh--------------------------hHHhHHHhhhcC--CEEEEEcccccc
Q 024411 149 GIDIYFENVGGK--------------------------LLDAVLPNMKIR--GRIAACGMISQY 184 (268)
Q Consensus 149 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~ 184 (268)
++|+.++.+|-. ..+.+++.|++. |++|.+++..+.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 799999988731 145567777763 999999887764
No 155
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00044 Score=55.60 Aligned_cols=81 Identities=22% Similarity=0.340 Sum_probs=55.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-e--eeecCChhhHHHHHHHHC-CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEADLNAALKRYF-PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~~~~~~-~~~~ 150 (268)
.++++||+|+++++|.++++.+...|++|+++++++++.+.+.+++ +.. . ..|..+.++....+.+.. .+.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4688999999999999999999999999999999887766554332 221 1 234444323333333321 2469
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|++++++|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999998873
No 156
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00016 Score=59.26 Aligned_cols=81 Identities=20% Similarity=0.254 Sum_probs=57.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--e--eecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--A--FNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v--~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
+++++||+||+|++|..+++.+...|++|++++++.++.+.+.++++.. . . .|..+.++....+.+.. .+.+|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999988877665455431 1 1 34444323333333321 13699
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
++++++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999884
No 157
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.0022 Score=51.26 Aligned_cols=81 Identities=11% Similarity=0.137 Sum_probs=53.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHH---hcCCC---eeeecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~-V~~~~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
++++++|+|++|++|..+++.+...|++ |+++++++++.....+ ..+.. ...|..+.+.+.+.+.... -++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5678999999999999999999999998 9999988765543221 23332 1234444323333332221 136
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|.++.+.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 158
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00033 Score=58.37 Aligned_cols=105 Identities=24% Similarity=0.211 Sum_probs=69.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
++++++|+||+|++|..+++.+...|++|+++++++++.+.+.++ .|... ..|..+.++....+.+.. -+.+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 467899999999999999999999999999999988776554322 34321 234444323333332221 1369
Q ss_pred cEEEeCCChh--------------------------hHHhHHHhhhc--CCEEEEEccccc
Q 024411 151 DIYFENVGGK--------------------------LLDAVLPNMKI--RGRIAACGMISQ 183 (268)
Q Consensus 151 d~v~d~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 183 (268)
|++++++|.. ....+++.+.+ .|++|.+++..+
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 9999998731 01234455554 588998877554
No 159
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00024 Score=56.71 Aligned_cols=81 Identities=19% Similarity=0.182 Sum_probs=56.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCChhhHHHHHHHHC--CCCccEEEe
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDIYFE 155 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~--~~~~d~v~d 155 (268)
++++++|+||+|++|..+++.+...|++|+++++++.+.+...++++.. ...|..+.+.....+.+.. .+.+|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999999999999999999999999999999887766554345432 2235544323333333321 136899999
Q ss_pred CCCh
Q 024411 156 NVGG 159 (268)
Q Consensus 156 ~~g~ 159 (268)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8873
No 160
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.76 E-value=0.00026 Score=56.84 Aligned_cols=80 Identities=21% Similarity=0.280 Sum_probs=56.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
++++++|+||++++|..+++.+...|++|+++++++++.+.+.++++.. . ..|..+.++....+.+.. .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4678999999999999999999999999999999988777666344431 1 224333323333333321 2368999
Q ss_pred EeCCC
Q 024411 154 FENVG 158 (268)
Q Consensus 154 ~d~~g 158 (268)
++++|
T Consensus 85 i~~ag 89 (263)
T PRK06200 85 VGNAG 89 (263)
T ss_pred EECCC
Confidence 99887
No 161
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.75 E-value=0.0003 Score=56.47 Aligned_cols=80 Identities=20% Similarity=0.223 Sum_probs=55.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eeecCChhhHHHHHHHHCC--CCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYFP--EGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v 153 (268)
++++++|+||+|++|..+++.+...|++|+++.++.++.+.+.+..+.. . ..|..+.++..+.+.+... +.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999999999999999999999999999999887777665233321 1 1244433233333333221 368999
Q ss_pred EeCCC
Q 024411 154 FENVG 158 (268)
Q Consensus 154 ~d~~g 158 (268)
++++|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99886
No 162
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00048 Score=54.56 Aligned_cols=79 Identities=23% Similarity=0.329 Sum_probs=56.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhHHHHHHHHCCCCccEEEeCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDIYFENV 157 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 157 (268)
++.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+..+... ..|..+.+.....+.. .+++|++++++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence 46789999999999999999999999999999998877766653444432 2354443123332322 23689999988
Q ss_pred Ch
Q 024411 158 GG 159 (268)
Q Consensus 158 g~ 159 (268)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 73
No 163
>PRK06484 short chain dehydrogenase; Validated
Probab=97.74 E-value=0.00055 Score=60.68 Aligned_cols=105 Identities=18% Similarity=0.189 Sum_probs=72.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
.++.+||+||++++|..+++.+...|++|+++++++++.+.+.++++... ..|..+.++....+.+.. .+.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46889999999999999999999999999999998888777764555431 234444323333333322 1469999
Q ss_pred EeCCChh----h-----------------------HHhHHHhhhcCCEEEEEccccc
Q 024411 154 FENVGGK----L-----------------------LDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 154 ~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
+.++|.. . .+.++..++.+|+++.+++..+
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 9988731 0 2233445555789999877554
No 164
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.74 E-value=0.00016 Score=49.92 Aligned_cols=95 Identities=20% Similarity=0.298 Sum_probs=63.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHhc---CCCeeeecCChhhHHHHHHHHCCCCccEEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGIDIYF 154 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~-~~g~~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~ 154 (268)
|+.+||-+|+ |.|..++.+++ ..+++|++++.+++..+.+++.. +...-+..... ++ .......++||+|+
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~--~~~~~~~~~~D~v~ 75 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA--EFDPDFLEPFDLVI 75 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC--HGGTTTSSCEEEEE
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc--ccCcccCCCCCEEE
Confidence 6788999995 55888899998 57889999999999888887554 22211111111 22 11111123799998
Q ss_pred eCC-Ch----h------hHHhHHHhhhcCCEEEEE
Q 024411 155 ENV-GG----K------LLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 155 d~~-g~----~------~~~~~~~~l~~~G~~v~~ 178 (268)
... .. . .+..+.+.|+|+|+++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 766 21 1 267888899999998763
No 165
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.74 E-value=0.00077 Score=58.65 Aligned_cols=80 Identities=18% Similarity=0.270 Sum_probs=53.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHhcCCCe-eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~--~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
+++++||+|++|++|..+++.+...|++|++++++. ++.+.+.++++... ..|..+.+.....+.... .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 578999999999999999999999999999988643 33333332455432 345555422333222221 2369999
Q ss_pred EeCCC
Q 024411 154 FENVG 158 (268)
Q Consensus 154 ~d~~g 158 (268)
++++|
T Consensus 289 i~~AG 293 (450)
T PRK08261 289 VHNAG 293 (450)
T ss_pred EECCC
Confidence 99988
No 166
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.73 E-value=0.00082 Score=59.16 Aligned_cols=104 Identities=13% Similarity=0.172 Sum_probs=67.7
Q ss_pred hcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--------CC-----Cee--eecCChhhH
Q 024411 74 VCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--------GF-----DEA--FNYKEEADL 138 (268)
Q Consensus 74 ~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~--------g~-----~~v--~~~~~~~~~ 138 (268)
..+.+.++++||+||+|++|..+++.+...|++|+++.++.++.+.+.+++ |. ..+ .|..+.
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~--- 150 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP--- 150 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH---
Confidence 345678899999999999999999999999999999999888765443111 11 112 233332
Q ss_pred HHHHHHHCCCCccEEEeCCChhh----------------HHhHHHhhhc--CCEEEEEcccc
Q 024411 139 NAALKRYFPEGIDIYFENVGGKL----------------LDAVLPNMKI--RGRIAACGMIS 182 (268)
Q Consensus 139 ~~~~~~~~~~~~d~v~d~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~ 182 (268)
..+.... +++|++|.++|... ...+++.+.. .+++|.++..+
T Consensus 151 -esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 151 -DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred -HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 1233222 35999999987421 1223344333 36899887654
No 167
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.72 E-value=0.0044 Score=50.37 Aligned_cols=91 Identities=22% Similarity=0.327 Sum_probs=67.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
.+++++|+|. |.+|..++..++.+|++|++..+++++...+. +.+.. .+.+ . ++.+.+. .+|++++++.
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~--~-~l~~~l~-----~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPL--N-KLEEKVA-----EIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecH--H-HHHHHhc-----cCCEEEECCC
Confidence 4789999997 99999999999999999999999988776665 55543 2221 1 3333232 4899999987
Q ss_pred hhhH-HhHHHhhhcCCEEEEEcc
Q 024411 159 GKLL-DAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 159 ~~~~-~~~~~~l~~~G~~v~~g~ 180 (268)
...+ ...++.++++..++.++.
T Consensus 219 ~~ii~~~~l~~~k~~aliIDlas 241 (287)
T TIGR02853 219 ALVLTADVLSKLPKHAVIIDLAS 241 (287)
T ss_pred hHHhCHHHHhcCCCCeEEEEeCc
Confidence 6433 456677888877888766
No 168
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00035 Score=56.43 Aligned_cols=80 Identities=19% Similarity=0.212 Sum_probs=56.0
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eeecCChhhHHHHHHHHC--CCCccEEEe
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYF--PEGIDIYFE 155 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~--~~~~d~v~d 155 (268)
+.+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+.++... ..|..+.+++...+.+.. .+++|++++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999999999999888899999999999887766543444222 234444323333333322 146899999
Q ss_pred CCCh
Q 024411 156 NVGG 159 (268)
Q Consensus 156 ~~g~ 159 (268)
++|.
T Consensus 85 ~ag~ 88 (273)
T PRK07825 85 NAGV 88 (273)
T ss_pred CCCc
Confidence 9873
No 169
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00036 Score=55.91 Aligned_cols=84 Identities=14% Similarity=0.205 Sum_probs=56.7
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC----eeeecCChhhHHHHHHHHC--CCC
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
..-++.++||+||+|++|..++..+...|++|+++.++++..+.+.+..... ...|..+.+.+...+.+.. -++
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG 86 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3457789999999999999999999999999999999877666554233221 1234444323322222221 136
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|.++.++|.
T Consensus 87 ~d~vi~~ag~ 96 (264)
T PRK12829 87 LDVLVNNAGI 96 (264)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 170
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.70 E-value=0.001 Score=50.24 Aligned_cols=93 Identities=19% Similarity=0.206 Sum_probs=63.8
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh---
Q 024411 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG--- 159 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~--- 159 (268)
|+|+||+|.+|..+++.+...|.+|++++|++++.+. ..+. +++..+-. +. +.+.+... ++|.++.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~-~~~~~d~~-d~-~~~~~al~-~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGV-EIIQGDLF-DP-DSVKAALK-GADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTE-EEEESCTT-CH-HHHHHHHT-TSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cccc-ccceeeeh-hh-hhhhhhhh-hcchhhhhhhhhcc
Confidence 7899999999999999999999999999999887775 1222 23322221 22 23333222 59999999983
Q ss_pred --hhHHhHHHhhhcCC--EEEEEcccc
Q 024411 160 --KLLDAVLPNMKIRG--RIAACGMIS 182 (268)
Q Consensus 160 --~~~~~~~~~l~~~G--~~v~~g~~~ 182 (268)
.......+.++..| +++.++...
T Consensus 74 ~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 74 DVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccceeeeccc
Confidence 34556666666544 777776543
No 171
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00041 Score=57.69 Aligned_cols=80 Identities=24% Similarity=0.391 Sum_probs=56.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe---eeecCChhhHHHHHHHH--CCCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRY--FPEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~--~~~~~ 150 (268)
.+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+ +.+... ..|..+.+...+.+.+. ..+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999999887765442 234432 23444431222222221 12479
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|++++++|
T Consensus 86 D~lVnnAG 93 (330)
T PRK06139 86 DVWVNNVG 93 (330)
T ss_pred CEEEECCC
Confidence 99999987
No 172
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00084 Score=53.28 Aligned_cols=81 Identities=17% Similarity=0.193 Sum_probs=54.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
++.+++|+|++|++|..++..+...|++|+++.+++++.+...+.+ +.. . ..|..+.++....+.+.. -+++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999999999999999999999999999998877655443222 322 1 224444323333332221 1369
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999874
No 173
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.66 E-value=0.00038 Score=57.69 Aligned_cols=79 Identities=14% Similarity=0.237 Sum_probs=55.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eeecCC--hhhHHHHHHHHCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKE--EADLNAALKRYFPE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----v~~~~~--~~~~~~~~~~~~~~ 148 (268)
.|++++|+||++++|...+..+...|++|+++++++++.+.+.+++ +... ..|..+ . +..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDID-EGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcH-HHHHHHHHHhcC
Confidence 4789999999999999999988889999999999998776554232 1111 234432 2 334445554444
Q ss_pred -CccEEEeCCC
Q 024411 149 -GIDIYFENVG 158 (268)
Q Consensus 149 -~~d~v~d~~g 158 (268)
.+|++++++|
T Consensus 131 ~didilVnnAG 141 (320)
T PLN02780 131 LDVGVLINNVG 141 (320)
T ss_pred CCccEEEEecC
Confidence 6779999876
No 174
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00032 Score=56.44 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=54.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
+++++||+||+|++|..+++.+...|++|+++++++++.+...+++ +.. . ..|..+.++....+.+.. .+++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999998877654432122 221 1 234444324444444432 2368
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|+++.++|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998875
No 175
>PRK06196 oxidoreductase; Provisional
Probab=97.66 E-value=0.00054 Score=56.65 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=55.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eeecCChhhHHHHHHHHC--CCCccEEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYF--PEGIDIYF 154 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~--~~~~d~v~ 154 (268)
.+.+++|+||+|++|..++..+...|++|++++++.++.+.+.+++.... ..|..+.++....+.+.. .+++|+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 46799999999999999999999999999999998877665442332112 234444323333343332 24799999
Q ss_pred eCCC
Q 024411 155 ENVG 158 (268)
Q Consensus 155 d~~g 158 (268)
+++|
T Consensus 105 ~nAg 108 (315)
T PRK06196 105 NNAG 108 (315)
T ss_pred ECCC
Confidence 9887
No 176
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.65 E-value=0.0024 Score=51.39 Aligned_cols=83 Identities=20% Similarity=0.145 Sum_probs=60.6
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-ee-------ecCChhhHHHHHHHHCC
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AF-------NYKEEADLNAALKRYFP 147 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~-------~~~~~~~~~~~~~~~~~ 147 (268)
+.++...++|+|++.++|++.+.-++..|++|.++.++.+++..+++.++... +. |-.+. +-.+.+.+.++
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y-~~v~~~~~~l~ 107 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDY-DSVSKVIEELR 107 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccH-HHHHHHHhhhh
Confidence 44566899999999999999999999999999999999999998876666532 11 11112 22333333232
Q ss_pred ---CCccEEEeCCCh
Q 024411 148 ---EGIDIYFENVGG 159 (268)
Q Consensus 148 ---~~~d~v~d~~g~ 159 (268)
+.+|.++.|+|.
T Consensus 108 ~~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 108 DLEGPIDNLFCCAGV 122 (331)
T ss_pred hccCCcceEEEecCc
Confidence 368999999985
No 177
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.0012 Score=52.38 Aligned_cols=102 Identities=20% Similarity=0.243 Sum_probs=62.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCC-e--eeecCChhhHHHHHHHHCC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYFP--EG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~-~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~ 149 (268)
++++++|+||+|++|..++..+...|++|+++.++.+ +.+.+.+ ..+.. . ..|..+.++....+.+... ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4578999999999999999999999999999887643 3332221 22321 1 2344443233333333221 36
Q ss_pred ccEEEeCCChh--------------------hHHhHHHhhhcCCEEEEEcc
Q 024411 150 IDIYFENVGGK--------------------LLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 150 ~d~v~d~~g~~--------------------~~~~~~~~l~~~G~~v~~g~ 180 (268)
+|+++.++|.. .++.+.+.+..+|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 89988877631 12334444445678888865
No 178
>PRK08017 oxidoreductase; Provisional
Probab=97.64 E-value=0.00048 Score=54.98 Aligned_cols=77 Identities=18% Similarity=0.289 Sum_probs=55.7
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhH---HHHHHHHCCCCccEEEeC
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADL---NAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~---~~~~~~~~~~~~d~v~d~ 156 (268)
++++|+||+|++|..+++.+...|++|+++.++.++.+.++ ..+... ..|..+.+.+ .+.+.+..++.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999999999999999999999999999999988887776 566543 2344443122 223333333568888888
Q ss_pred CC
Q 024411 157 VG 158 (268)
Q Consensus 157 ~g 158 (268)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 76
No 179
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00044 Score=55.28 Aligned_cols=80 Identities=21% Similarity=0.322 Sum_probs=55.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC-Cee--eecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF-DEA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+++++|+||+|++|..++..+...|++|+++++++++.+.+.+.+ +. ..+ .|..+.+++...+.+.. .+.+
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI 87 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999999999999988766554222 11 122 23333323433333321 2368
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|++++++|
T Consensus 88 d~li~~ag 95 (258)
T PRK06949 88 DILVNNSG 95 (258)
T ss_pred CEEEECCC
Confidence 99999988
No 180
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.63 E-value=0.00025 Score=61.03 Aligned_cols=89 Identities=21% Similarity=0.274 Sum_probs=62.1
Q ss_pred cchHHHHHHHhhhhcC---CCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCChh
Q 024411 61 GMPGMTAYVGFYEVCS---PKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEA 136 (268)
Q Consensus 61 ~~~~~~a~~~l~~~~~---~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 136 (268)
..+.+.+++++..... -.++.+++|+|+ |.+|..+++.+...|+ +|+++.+++++...+.+.+|.. +++..
T Consensus 160 ~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~--- 234 (423)
T PRK00045 160 AGAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD--- 234 (423)
T ss_pred CCCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH---
Confidence 3355666666643322 257789999997 9999999999999998 8999999988866444377753 33321
Q ss_pred hHHHHHHHHCCCCccEEEeCCCh
Q 024411 137 DLNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 137 ~~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
++...+ .++|+|++|++.
T Consensus 235 ~~~~~l-----~~aDvVI~aT~s 252 (423)
T PRK00045 235 ELPEAL-----AEADIVISSTGA 252 (423)
T ss_pred HHHHHh-----ccCCEEEECCCC
Confidence 332222 258999999986
No 181
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00048 Score=55.35 Aligned_cols=81 Identities=16% Similarity=0.218 Sum_probs=55.2
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eeecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~--~~ 148 (268)
.+++++|+||++++|..+++.+...|++|+++++++++.+.+.+++ +... ..|..+.++..+.+.+.. -+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999999999887665443222 1111 224444323333333322 24
Q ss_pred CccEEEeCCCh
Q 024411 149 GIDIYFENVGG 159 (268)
Q Consensus 149 ~~d~v~d~~g~ 159 (268)
.+|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999873
No 182
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00041 Score=55.55 Aligned_cols=80 Identities=14% Similarity=0.147 Sum_probs=54.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-----CC-e--eeecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-----FD-E--AFNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g-----~~-~--v~~~~~~~~~~~~~~~~~--~~ 148 (268)
.+++++|+|+++++|..+++.+...|++|+++++++++.+.+.+++. .. . ..|..+.+++...+.+.. .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999998877655443332 11 1 124433323333333321 13
Q ss_pred CccEEEeCCC
Q 024411 149 GIDIYFENVG 158 (268)
Q Consensus 149 ~~d~v~d~~g 158 (268)
.+|+++.++|
T Consensus 86 ~id~li~~ag 95 (260)
T PRK07063 86 PLDVLVNNAG 95 (260)
T ss_pred CCcEEEECCC
Confidence 6999999887
No 183
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00054 Score=53.63 Aligned_cols=78 Identities=19% Similarity=0.190 Sum_probs=54.5
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
++++|+|++|++|..++..+...|++|+++++++++.+.+. +++... ..|..+.+.+...+.....+++|+++.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 47999999999999999999999999999998877666555 433222 234444323433343333347999998876
Q ss_pred h
Q 024411 159 G 159 (268)
Q Consensus 159 ~ 159 (268)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 3
No 184
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00041 Score=56.70 Aligned_cols=81 Identities=23% Similarity=0.362 Sum_probs=54.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-ee--eecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++ +.. .. .|..+.++..+.+.... .+.+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999999999999987765554232 222 12 23333313333333221 2368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|++++++|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999873
No 185
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00045 Score=55.11 Aligned_cols=80 Identities=25% Similarity=0.313 Sum_probs=55.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.++++||+|+++++|..+++.+...|++|++++++.++.+.+.+++ +.. . ..|..+.++..+.+.+.. .+.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999999887766554333 221 1 234444323333333221 1469
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|+++.++|
T Consensus 88 d~lv~~ag 95 (253)
T PRK05867 88 DIAVCNAG 95 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 186
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.60 E-value=9.5e-05 Score=66.09 Aligned_cols=77 Identities=18% Similarity=0.324 Sum_probs=56.6
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHhcCCCeeeecCC
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS---------------------KDKVDLLKNKFGFDEAFNYKE 134 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~---------------------~~~~~~~~~~~g~~~v~~~~~ 134 (268)
...++++|+|+|+ |+.|+.+++.++..|++|++++.. +.+.+.++ ++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence 3678999999998 999999999999999999998742 34566677 788765555432
Q ss_pred -hhhH-HHHHHHHCCCCccEEEeCCCh
Q 024411 135 -EADL-NAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 135 -~~~~-~~~~~~~~~~~~d~v~d~~g~ 159 (268)
. +. ...+. .++|++++++|.
T Consensus 211 ~~-~~~~~~~~----~~~D~Vi~AtG~ 232 (564)
T PRK12771 211 GE-DITLEQLE----GEFDAVFVAIGA 232 (564)
T ss_pred CC-cCCHHHHH----hhCCEEEEeeCC
Confidence 1 21 11121 259999999996
No 187
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.0007 Score=53.73 Aligned_cols=80 Identities=18% Similarity=0.204 Sum_probs=55.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-e--eecCChhhHHH---HHHHHCCCCccE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-A--FNYKEEADLNA---ALKRYFPEGIDI 152 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v--~~~~~~~~~~~---~~~~~~~~~~d~ 152 (268)
++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++++... . .|..+.++... .+.+. .+++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCCE
Confidence 46789999999999999999999999999999988776665553555431 2 23333212222 22222 136899
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
++.++|.
T Consensus 84 vi~~ag~ 90 (249)
T PRK06500 84 VFINAGV 90 (249)
T ss_pred EEECCCC
Confidence 9998873
No 188
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00049 Score=55.01 Aligned_cols=81 Identities=17% Similarity=0.200 Sum_probs=55.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC---eeeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+.+++|+||+|++|..++..+...|++|+++++++.+.+.+.+++ +.. ...|..+.+.+...+.+.. -+.+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 5678999999999999999999999999999999887665554233 221 1234444323333333321 1368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.++|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999998863
No 189
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.57 E-value=0.0006 Score=54.15 Aligned_cols=81 Identities=21% Similarity=0.283 Sum_probs=55.2
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC--CC---eeeecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG--FD---EAFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g--~~---~v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
.+.++||+||+|++|..+++.+...|++|+++++++++.+.+.+.+. .. ...|..+.+++...+.+.. .+.+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35689999999999999999999999999999999887665543332 11 1223333323433333321 13689
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
.++.++|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99998874
No 190
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.0009 Score=55.27 Aligned_cols=81 Identities=16% Similarity=0.159 Sum_probs=54.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----C-CC-e--eeecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----G-FD-E--AFNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~----g-~~-~--v~~~~~~~~~~~~~~~~~--~~ 148 (268)
.+++++|+||++++|..++..+...|++|++++++.++.+.+.+++ + .. . ..|..+.++....+.+.. .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4679999999999999999999999999999999887655443222 1 11 1 234444323333333322 23
Q ss_pred CccEEEeCCCh
Q 024411 149 GIDIYFENVGG 159 (268)
Q Consensus 149 ~~d~v~d~~g~ 159 (268)
.+|++++++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 68999998873
No 191
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.56 E-value=0.0026 Score=47.89 Aligned_cols=90 Identities=23% Similarity=0.278 Sum_probs=63.5
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
--.+.+|.|+|. |.+|..+++.++.+|++|++.+++........ ..+. .+. ++.+.+.+ .|+++.+
T Consensus 33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~----~~~---~l~ell~~-----aDiv~~~ 98 (178)
T PF02826_consen 33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGV----EYV---SLDELLAQ-----ADIVSLH 98 (178)
T ss_dssp -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTE----EES---SHHHHHHH------SEEEE-
T ss_pred ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc-cccc----eee---ehhhhcch-----hhhhhhh
Confidence 346899999997 99999999999999999999998877655333 3333 111 44545554 7999887
Q ss_pred CCh-h-----hHHhHHHhhhcCCEEEEEcc
Q 024411 157 VGG-K-----LLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 157 ~g~-~-----~~~~~~~~l~~~G~~v~~g~ 180 (268)
... + .=...+..++++..+|.++-
T Consensus 99 ~plt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred hccccccceeeeeeeeeccccceEEEeccc
Confidence 763 2 12467888898888888755
No 192
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00091 Score=53.64 Aligned_cols=83 Identities=22% Similarity=0.303 Sum_probs=55.7
Q ss_pred CCCCcEEEEecCcc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCCee----eecCChhhHHHHHHHHC-
Q 024411 77 PKHGECVFISAASG-AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK----FGFDEA----FNYKEEADLNAALKRYF- 146 (268)
Q Consensus 77 ~~~~~~vlI~ga~g-~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~~~~~~- 146 (268)
+.++++++|+||+| ++|.++++.+...|++|+++++++++.+...++ ++...+ .|..+.+.....+.+..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44578999999986 899999999999999999999887766544322 343222 24444323333333221
Q ss_pred -CCCccEEEeCCCh
Q 024411 147 -PEGIDIYFENVGG 159 (268)
Q Consensus 147 -~~~~d~v~d~~g~ 159 (268)
.+.+|+++.++|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 2468999999983
No 193
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00062 Score=54.32 Aligned_cols=81 Identities=27% Similarity=0.352 Sum_probs=54.9
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-ee--eecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+++++|+||++++|..++..+...|++|+++++++++.+.+.+++ +.. .. .|..+.+.....+.+.. -+.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 3678999999999999999999999999999999888766554232 322 11 24443323333333322 1369
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999998873
No 194
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00079 Score=53.71 Aligned_cols=80 Identities=15% Similarity=0.220 Sum_probs=53.9
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC----eeeecCChhhHHHHHHHHC--CCCccE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEADLNAALKRYF--PEGIDI 152 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~~~~~~--~~~~d~ 152 (268)
+++++||+||+|++|..+++.+...|++|+++++++...+... +.... ...|..+.+.+...+.+.. .+++|.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999999999999999999999999999998876554444 33221 1234443323333333221 136899
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9998873
No 195
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00063 Score=53.61 Aligned_cols=81 Identities=19% Similarity=0.273 Sum_probs=55.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---Cee--eecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---DEA--FNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~---~~v--~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
.+.+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+++.. .+. .|..+.+++...+.+.. .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468899999999999999999988899999999988776655434431 122 23333324444444322 13699
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
+++++.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998763
No 196
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.54 E-value=0.00087 Score=54.61 Aligned_cols=145 Identities=18% Similarity=0.191 Sum_probs=81.2
Q ss_pred CCCCCeEEeccccceeEeecCCcceeecCCCCCchhhhhhccchHHHHH--HHhhhhcCCCCCcEEEEecCcchHHHHHH
Q 024411 20 FNKGDLVWGMTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAY--VGFYEVCSPKHGECVFISAASGAVGQLVG 97 (268)
Q Consensus 20 ~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~--~~l~~~~~~~~~~~vlI~ga~g~~G~~~i 97 (268)
+++|++.+...+|.++...+....+.++|. +.+-.+. ...|.. .++.. ...++++||-.|+ |. |..++
T Consensus 106 ~~~g~~~~i~p~w~~~~~~~~~~~i~ldpg---~aFgtG~---h~tt~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~lai 175 (288)
T TIGR00406 106 VQFGKRFWICPSWRDVPSDEDALIIMLDPG---LAFGTGT---HPTTSLCLEWLED--LDLKDKNVIDVGC-GS-GILSI 175 (288)
T ss_pred EEEcCeEEEECCCcCCCCCCCcEEEEECCC---CcccCCC---CHHHHHHHHHHHh--hcCCCCEEEEeCC-Ch-hHHHH
Confidence 556666666666655433223335555332 2221111 112221 22222 2457899999996 54 77777
Q ss_pred HHHHHcCC-EEEEEeCCHHHHHHHHHhc---CCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh----hhHHhHHHhh
Q 024411 98 QFAKLLGC-YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG----KLLDAVLPNM 169 (268)
Q Consensus 98 ~l~~~~g~-~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~----~~~~~~~~~l 169 (268)
.+++ +|+ +|++++.++...+.+++.. +....+..... + ......++||+|+..... ..+..+.+.|
T Consensus 176 ~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDlVvan~~~~~l~~ll~~~~~~L 249 (288)
T TIGR00406 176 AALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADVIVANILAEVIKELYPQFSRLV 249 (288)
T ss_pred HHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceEEEEecCHHHHHHHHHHHHHHc
Confidence 7665 465 9999999988877776322 22111111111 1 111122479999865443 3456788999
Q ss_pred hcCCEEEEEcc
Q 024411 170 KIRGRIAACGM 180 (268)
Q Consensus 170 ~~~G~~v~~g~ 180 (268)
+|+|.++..|.
T Consensus 250 kpgG~li~sgi 260 (288)
T TIGR00406 250 KPGGWLILSGI 260 (288)
T ss_pred CCCcEEEEEeC
Confidence 99999988765
No 197
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00088 Score=54.27 Aligned_cols=81 Identities=19% Similarity=0.160 Sum_probs=55.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eeecCChhhHHHHHHHHCC--CCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYFP--EGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v 153 (268)
.+.++||+||+|++|..+++.+...|++|+++++++++.+.+.+..+.. . ..|..+.+.....+.+... +.+|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3568999999999999999999999999999999988776665222221 1 2344443233333333221 368999
Q ss_pred EeCCCh
Q 024411 154 FENVGG 159 (268)
Q Consensus 154 ~d~~g~ 159 (268)
+.++|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999874
No 198
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.002 Score=51.96 Aligned_cols=78 Identities=14% Similarity=0.170 Sum_probs=52.1
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC--e--eeecCChhhHHHHHHHHC--CCCccE
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD--E--AFNYKEEADLNAALKRYF--PEGIDI 152 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~--v~~~~~~~~~~~~~~~~~--~~~~d~ 152 (268)
+++|+||+|++|..+++.+...|++|+++.+++++.+...++ .+.. . ..|..+.+.....+.+.. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 689999999999999999999999999999887765443212 2322 1 235554323333233221 136899
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
++.++|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999874
No 199
>PRK05717 oxidoreductase; Validated
Probab=97.51 E-value=0.001 Score=53.17 Aligned_cols=81 Identities=16% Similarity=0.225 Sum_probs=54.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eeecCChhhHHHHHHHHCC--CCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYFP--EGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v 153 (268)
.+.+++|+|++|++|..++..+...|++|++++++..+.+.+.++++.. . ..|..+.++....+.+... +.+|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999999999999999999999999999988776555443244432 1 2344443233333333221 368999
Q ss_pred EeCCCh
Q 024411 154 FENVGG 159 (268)
Q Consensus 154 ~d~~g~ 159 (268)
+.++|.
T Consensus 89 i~~ag~ 94 (255)
T PRK05717 89 VCNAAI 94 (255)
T ss_pred EECCCc
Confidence 998873
No 200
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.0012 Score=51.67 Aligned_cols=76 Identities=13% Similarity=0.194 Sum_probs=53.4
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
+++|+||+|++|..+++.+...|++|+.+.++.++.+.+.++++... ..|..+.+++...+.+.. +.+|++++++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 48999999999999999999999999999998887766543554432 235444423333333332 25899998765
No 201
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.0042 Score=49.14 Aligned_cols=76 Identities=21% Similarity=0.273 Sum_probs=51.5
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-Ce--eeecCChhhHHHHHHHHCCCCccEEEeCC
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DE--AFNYKEEADLNAALKRYFPEGIDIYFENV 157 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~-~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 157 (268)
.+++|+||+|++|..++..+...|++|+++++++++.+.+. +.+. .. ..|..+.+++.+.+.+. ....|.++.++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~d~~i~~a 79 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH-TQSANIFTLAFDVTDHPGTKAALSQL-PFIPELWIFNA 79 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HhcCCCeEEEeeCCCHHHHHHHHHhc-ccCCCEEEEcC
Confidence 46899999999999988888889999999999988777665 3221 11 23555442444444433 22456666555
Q ss_pred C
Q 024411 158 G 158 (268)
Q Consensus 158 g 158 (268)
|
T Consensus 80 g 80 (240)
T PRK06101 80 G 80 (240)
T ss_pred c
Confidence 4
No 202
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.51 E-value=0.00088 Score=53.46 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=54.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-ee--eecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.++++||+||+|++|..+++.+...|++|+++.+++++.+.+.+++ +.. .. .|..+.+++...+.+.. .+.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999889999999998877655443222 221 11 24444323333333321 2368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999998873
No 203
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00084 Score=53.92 Aligned_cols=80 Identities=16% Similarity=0.210 Sum_probs=54.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
++.++||+|++|++|..+++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.+...+.+.+.. -+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999999887665543222 221 1 234444323333333221 1369
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|++++++|
T Consensus 89 d~vi~~Ag 96 (263)
T PRK07814 89 DIVVNNVG 96 (263)
T ss_pred CEEEECCC
Confidence 99999887
No 204
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0013 Score=52.64 Aligned_cols=79 Identities=22% Similarity=0.235 Sum_probs=54.4
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---e--eeecCChhhHHHHHHHHCC--CCccE
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEADLNAALKRYFP--EGIDI 152 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~~~~~~~--~~~d~ 152 (268)
+.+++|+||+|++|..++..+...|++|+++++++++.+.+.+++... . ..|..+.++..+.+.+... +.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 368999999999999999999999999999999888776655333211 1 2344443234333333221 35899
Q ss_pred EEeCCC
Q 024411 153 YFENVG 158 (268)
Q Consensus 153 v~d~~g 158 (268)
++.++|
T Consensus 82 lv~~ag 87 (257)
T PRK07024 82 VIANAG 87 (257)
T ss_pred EEECCC
Confidence 999887
No 205
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.49 E-value=0.0011 Score=54.98 Aligned_cols=80 Identities=15% Similarity=0.220 Sum_probs=55.2
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---C-e--eeecCChhhHHHHHHHH--CCCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---D-E--AFNYKEEADLNAALKRY--FPEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~---~-~--v~~~~~~~~~~~~~~~~--~~~~~ 150 (268)
.+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++.. . . ..|..+.++....+.+. ..+.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999998999999999988876655434421 1 1 23444432333333332 12369
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|++++++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999887
No 206
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0015 Score=51.55 Aligned_cols=81 Identities=16% Similarity=0.248 Sum_probs=54.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC-C---eeeecCC---h--hhHHHHHHHHC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF-D---EAFNYKE---E--ADLNAALKRYF 146 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~-~---~v~~~~~---~--~~~~~~~~~~~ 146 (268)
++++++|+|++|++|..+++.+...|++|+++++++++.+.+.+++ +. . ...|..+ . ..+...+....
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999987765543232 21 1 1123321 1 12333444433
Q ss_pred CCCccEEEeCCCh
Q 024411 147 PEGIDIYFENVGG 159 (268)
Q Consensus 147 ~~~~d~v~d~~g~ 159 (268)
++.+|.++.++|.
T Consensus 85 ~~~id~vi~~ag~ 97 (239)
T PRK08703 85 QGKLDGIVHCAGY 97 (239)
T ss_pred CCCCCEEEEeccc
Confidence 3468999998873
No 207
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00093 Score=52.58 Aligned_cols=81 Identities=12% Similarity=0.143 Sum_probs=52.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe-eeecCChhhHHHHHHHHC--CCCccE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE-AFNYKEEADLNAALKRYF--PEGIDI 152 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~ 152 (268)
+++++||+|++|++|..+++.+...|++|+++++++++.....+++ +... ..|..+.+++...+.+.. .+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4689999999999999999999989999999998776543322122 2221 234433313333333221 136899
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
++.++|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998763
No 208
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.47 E-value=0.0064 Score=46.62 Aligned_cols=99 Identities=21% Similarity=0.314 Sum_probs=67.6
Q ss_pred hcCCCCCcEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCC-CeeeecCChhhHHHHHHHHCC
Q 024411 74 VCSPKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKN---KFGF-DEAFNYKEEADLNAALKRYFP 147 (268)
Q Consensus 74 ~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~~~~~~~~~---~~g~-~~v~~~~~~~~~~~~~~~~~~ 147 (268)
...+.++++++-.|+ |. |..++.+++..+ .+|++++.+++..+.+++ .++. +.+..... +..+.+.. ..
T Consensus 35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~--d~~~~l~~-~~ 109 (198)
T PRK00377 35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG--EAPEILFT-IN 109 (198)
T ss_pred HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe--chhhhHhh-cC
Confidence 457889999999997 55 999999998764 489999999988776653 3452 32221111 22222222 22
Q ss_pred CCccEEEeCCCh----hhHHhHHHhhhcCCEEEE
Q 024411 148 EGIDIYFENVGG----KLLDAVLPNMKIRGRIAA 177 (268)
Q Consensus 148 ~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~ 177 (268)
+.+|.++...+. ..+..+.+.|+|+|+++.
T Consensus 110 ~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 110 EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 479999975542 457788889999999875
No 209
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.0009 Score=54.19 Aligned_cols=80 Identities=21% Similarity=0.323 Sum_probs=54.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.++++||+||+|++|..++..+...|++|++++++.++.+.+.+++ +.. . ..|..+.+++.+.+.+.. .+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999999999998877665443232 322 1 224444323333333221 2368
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|++++++|
T Consensus 85 d~li~nAg 92 (275)
T PRK05876 85 DVVFSNAG 92 (275)
T ss_pred CEEEECCC
Confidence 99999887
No 210
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0012 Score=52.92 Aligned_cols=79 Identities=22% Similarity=0.318 Sum_probs=55.6
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-CC-e--eeecCChhhHHHHHHHH---CCCCccEE
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-FD-E--AFNYKEEADLNAALKRY---FPEGIDIY 153 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~--v~~~~~~~~~~~~~~~~---~~~~~d~v 153 (268)
+++||+||+|++|..+++.+...|++|++++++.++.+.+.+..+ .. . ..|..+.+.+.+.+.+. ..+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 479999999999999999999999999999999887776653433 11 1 23444432333333332 13479999
Q ss_pred EeCCCh
Q 024411 154 FENVGG 159 (268)
Q Consensus 154 ~d~~g~ 159 (268)
+.++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999874
No 211
>PRK06194 hypothetical protein; Provisional
Probab=97.46 E-value=0.00098 Score=54.22 Aligned_cols=80 Identities=19% Similarity=0.293 Sum_probs=53.1
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-ee--eecCChhhHHHHHHHHC--CCCcc
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
+.++||+||+|++|..++..+...|++|++++++.++.+...+++ +.. .. .|..+.+++...+.+.. .+.+|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999998876554443232 222 11 23333213333333221 23689
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
+++.++|.
T Consensus 86 ~vi~~Ag~ 93 (287)
T PRK06194 86 LLFNNAGV 93 (287)
T ss_pred EEEECCCC
Confidence 99999874
No 212
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0017 Score=50.67 Aligned_cols=78 Identities=19% Similarity=0.207 Sum_probs=54.9
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCChhhHHHHHHHHCCCCccEEEeCCCh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
++++|+|++|++|..+++.+...|++|++++++.++.+.+. ..+.. ...|..+.+.+...+.+..++++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46899999999999999988888999999999888777666 44443 23444444233333333323379999988764
No 213
>PRK09186 flagellin modification protein A; Provisional
Probab=97.45 E-value=0.0011 Score=52.81 Aligned_cols=80 Identities=16% Similarity=0.205 Sum_probs=54.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC--e--eeecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD--E--AFNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~----g~~--~--v~~~~~~~~~~~~~~~~~--~~ 148 (268)
+++++||+||+|++|..++..+...|++|+.+.+++++.+.+.+++ +.. . ..|..+.+.+...+.+.. -+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999998887765543233 221 1 224444323333333321 13
Q ss_pred CccEEEeCCC
Q 024411 149 GIDIYFENVG 158 (268)
Q Consensus 149 ~~d~v~d~~g 158 (268)
++|+++.+++
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999885
No 214
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.45 E-value=0.0013 Score=52.24 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=53.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-H-HHHHHHhcCCC-e--eeecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-K-VDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~-~-~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
.++++||+||+|++|..++..+...|++|+++++++. + .+.+. +.+.. . ..|..+.+++...+.+.. .+++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999998653 1 22233 33432 1 234444324443343322 13699
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
+++.++|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998863
No 215
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0014 Score=52.42 Aligned_cols=84 Identities=14% Similarity=0.137 Sum_probs=53.5
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHH---hcCC-C-ee--eecCChhhHHHHHHHHC
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDK-VDLLKN---KFGF-D-EA--FNYKEEADLNAALKRYF 146 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~-g~~V~~~~~~~~~-~~~~~~---~~g~-~-~v--~~~~~~~~~~~~~~~~~ 146 (268)
.+.++.++||+||+|++|..+++-+... |++|+++++++++ .+.+.+ ..+. . +. .|..+.++..+.+++..
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 3567889999999999999999877766 4899999988764 443321 2232 1 22 34333313333333332
Q ss_pred C-CCccEEEeCCCh
Q 024411 147 P-EGIDIYFENVGG 159 (268)
Q Consensus 147 ~-~~~d~v~d~~g~ 159 (268)
. +.+|+++.++|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 479998887763
No 216
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.44 E-value=0.0015 Score=51.95 Aligned_cols=78 Identities=18% Similarity=0.310 Sum_probs=54.2
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eeecCChhhHHHHHHHHC--CCCccEEEeC
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDIYFEN 156 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v~d~ 156 (268)
+++|+|++|++|..++..+...|++|+++++++++.+.+.+.++.. . ..|..+.+++...+.+.. .+++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899999999999999999999999999999988776665344432 1 224443323333333322 1369999988
Q ss_pred CCh
Q 024411 157 VGG 159 (268)
Q Consensus 157 ~g~ 159 (268)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 763
No 217
>PRK06484 short chain dehydrogenase; Validated
Probab=97.43 E-value=0.0012 Score=58.63 Aligned_cols=81 Identities=21% Similarity=0.323 Sum_probs=58.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
.+++++|+|+++++|..+++.+...|++|++++++.++.+.+.++++... ..|..+.+++...+.+.. .+.+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 57899999999999999999999999999999998888766654565432 234444323433333322 1369999
Q ss_pred EeCCCh
Q 024411 154 FENVGG 159 (268)
Q Consensus 154 ~d~~g~ 159 (268)
++++|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 998863
No 218
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.43 E-value=0.0021 Score=54.45 Aligned_cols=107 Identities=18% Similarity=0.124 Sum_probs=73.3
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHH
Q 024411 64 GMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALK 143 (268)
Q Consensus 64 ~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 143 (268)
-...+..+.....++++++||-+|+ |.|..+..+++..|++|++++.+++..+.+++.. ....+..... ++.
T Consensus 152 q~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~~---- 223 (383)
T PRK11705 152 QEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DYR---- 223 (383)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-chh----
Confidence 3444455555667899999999996 5688888999988999999999999999888333 2111222111 221
Q ss_pred HHCCCCccEEEe-----CCCh----hhHHhHHHhhhcCCEEEEEc
Q 024411 144 RYFPEGIDIYFE-----NVGG----KLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 144 ~~~~~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~~g 179 (268)
+. .+.+|.|+. .+|. ..+..+.+.|+|+|.++...
T Consensus 224 ~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 224 DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 11 346998864 3342 35678888999999988753
No 219
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.001 Score=52.96 Aligned_cols=79 Identities=18% Similarity=0.203 Sum_probs=53.5
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-eee--ecCChhhHHHHHHHHC--CCCcc
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EAF--NYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~~~~~~--~~~~d 151 (268)
+++++|+|++|++|..+++.+...|++|+++++++++.+.+.+.+ +.. ..+ |..+.+.....+.+.. .+.+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999999999999999999999999999998887665543222 221 222 4333323333333322 13689
Q ss_pred EEEeCCC
Q 024411 152 IYFENVG 158 (268)
Q Consensus 152 ~v~d~~g 158 (268)
++++++|
T Consensus 81 ~lI~~ag 87 (252)
T PRK07677 81 ALINNAA 87 (252)
T ss_pred EEEECCC
Confidence 9999887
No 220
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0015 Score=52.82 Aligned_cols=79 Identities=25% Similarity=0.318 Sum_probs=54.7
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eeecCChhhHHHHHHHHC--CCCccEEEe
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDIYFE 155 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v~d 155 (268)
.++||+||+|++|..+++.+...|++|+++.+++++.+.+.+..+.. . ..|..+.+.+...+.+.. .+++|+++.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999999999999999999999999999999988777665333322 1 234444323333333321 136899999
Q ss_pred CCCh
Q 024411 156 NVGG 159 (268)
Q Consensus 156 ~~g~ 159 (268)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 8873
No 221
>PLN02253 xanthoxin dehydrogenase
Probab=97.42 E-value=0.0015 Score=52.91 Aligned_cols=81 Identities=16% Similarity=0.174 Sum_probs=54.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---e--eeecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
.++++||+||+|++|..+++.+...|++|+++++++++.+.+.++++.. . ..|..+.+...+.+.+.. -+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999999999889999999998776655444344321 1 234444323333333221 13699
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
++++++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99998873
No 222
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.42 E-value=0.0016 Score=52.06 Aligned_cols=80 Identities=19% Similarity=0.283 Sum_probs=55.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
.++++||+|++|++|..++..+...|++|++++++.++.+.+.++++.. . ..|..+.+.....+.+.. .+.+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3578999999999999999999999999999999888776655344422 1 223333313333333221 1368999
Q ss_pred EeCCC
Q 024411 154 FENVG 158 (268)
Q Consensus 154 ~d~~g 158 (268)
+.++|
T Consensus 85 i~~ag 89 (257)
T PRK07067 85 FNNAA 89 (257)
T ss_pred EECCC
Confidence 98876
No 223
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.40 E-value=0.0013 Score=52.58 Aligned_cols=78 Identities=24% Similarity=0.284 Sum_probs=53.0
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCee--eecCChhhHHHHHHHHC--CCCccEEE
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEA--FNYKEEADLNAALKRYF--PEGIDIYF 154 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~~v--~~~~~~~~~~~~~~~~~--~~~~d~v~ 154 (268)
++||+|+++++|..+++.+...|++|+++++++++.+.+.+++ +.... .|..+.++..+.+.+.. .+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999999999999999999999999999887665543232 22222 34433323333333322 24699999
Q ss_pred eCCCh
Q 024411 155 ENVGG 159 (268)
Q Consensus 155 d~~g~ 159 (268)
+++|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 98873
No 224
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0011 Score=54.45 Aligned_cols=80 Identities=21% Similarity=0.248 Sum_probs=53.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCC-e--eeecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~~~~--~~ 148 (268)
.+++++|+||+|++|..+++.+...|++|++++++.++.+.+.+++ +.. . ..|..+.++....+.+.. .+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5689999999999999999988889999999999877654432122 111 1 224444323333333332 13
Q ss_pred CccEEEeCCC
Q 024411 149 GIDIYFENVG 158 (268)
Q Consensus 149 ~~d~v~d~~g 158 (268)
++|+++.++|
T Consensus 95 ~iD~li~nAg 104 (306)
T PRK06197 95 RIDLLINNAG 104 (306)
T ss_pred CCCEEEECCc
Confidence 6999999887
No 225
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=97.40 E-value=0.033 Score=45.08 Aligned_cols=168 Identities=15% Similarity=0.123 Sum_probs=87.5
Q ss_pred EEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC----CCee-------e-ecCChhhHHHHHHHHCCC-
Q 024411 83 VFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFG----FDEA-------F-NYKEEADLNAALKRYFPE- 148 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g----~~~v-------~-~~~~~~~~~~~~~~~~~~- 148 (268)
|||+||+|++|..+++-+...+. +++++++++.++-.+++++. ...+ + |.+ -.+.+.+....
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr----d~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR----DKERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC----HHHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc----CHHHHHHHHhhc
Confidence 79999999999998888888886 89999999988777765662 1111 1 222 23355555555
Q ss_pred CccEEEeCCChhh------------------HHhHHHhhhcCC--EEEEEccccccc-CCCCccccchHHH----Hhc--
Q 024411 149 GIDIYFENVGGKL------------------LDAVLPNMKIRG--RIAACGMISQYN-LDKPEGVHNLMYL----VSK-- 201 (268)
Q Consensus 149 ~~d~v~d~~g~~~------------------~~~~~~~l~~~G--~~v~~g~~~~~~-~~~~~~~~~~~~~----~~~-- 201 (268)
++|+||.++.-+. ....++.....| +++.++..--.+ .+.........+. ...
T Consensus 77 ~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmGatKrlaE~l~~~~~~~~ 156 (293)
T PF02719_consen 77 KPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMGATKRLAEKLVQAANQYS 156 (293)
T ss_dssp T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHHHHHHHHHHHHHHHCCTS
T ss_pred CCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHHHHHHHHHHHHHHHhhhC
Confidence 8999999886432 223334444444 677765421000 0000000001111 111
Q ss_pred ---ceeeeeEEecccccchHHHHHHHHHHHHcCCceeeeehhc--ccccHHHHHHHHH
Q 024411 202 ---RLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAE--GLESAPAALIGLF 254 (268)
Q Consensus 202 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~--~~~~~~~a~~~~~ 254 (268)
...+...+.+++.......+....+++++|.--+..+..+ -|=.++||.+...
T Consensus 157 ~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl 214 (293)
T PF02719_consen 157 GNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVL 214 (293)
T ss_dssp SSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHH
T ss_pred CCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHH
Confidence 2356666777765555677888888888884433333222 2556677766554
No 226
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.40 E-value=0.0015 Score=52.35 Aligned_cols=81 Identities=22% Similarity=0.343 Sum_probs=54.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHCC--CCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 150 (268)
.++++||+||+|++|..+++.+...|++|++++++.++.+.+.+.+ +.. . ..|..+.+.+...+.+... +.+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4688999999999999999999999999999999887765554222 221 1 2344443233333332211 368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|.++.++|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999998873
No 227
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0016 Score=51.55 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=55.0
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
...++++|+|++|++|..++..+...|++|+++++++++.+.+.+.. +.. . ..|..+.+.+...+.+.. .+.
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34578999999999999999999999999999999887665543222 221 1 223333323333333321 136
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|+++.++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 228
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0017 Score=51.79 Aligned_cols=75 Identities=16% Similarity=0.254 Sum_probs=52.1
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-e--eeecCChhhHHHHHHHHCCCCccEE
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYFPEGIDIY 153 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v 153 (268)
+.++||+||+|++|..+++.+...|++|+++++++.+...+.+ ..+.. . ..|..+. . .+.....+++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-I---DRAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-H---HHHHHhcCCCCEE
Confidence 3579999999999999999999999999999988776555432 12222 1 2344432 1 2333223479999
Q ss_pred EeCCC
Q 024411 154 FENVG 158 (268)
Q Consensus 154 ~d~~g 158 (268)
+.++|
T Consensus 78 i~~ag 82 (257)
T PRK09291 78 LNNAG 82 (257)
T ss_pred EECCC
Confidence 99887
No 229
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0018 Score=51.95 Aligned_cols=81 Identities=22% Similarity=0.305 Sum_probs=54.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CC-Cee--eecCChhhHHHHHHHHC-CCCccE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--GF-DEA--FNYKEEADLNAALKRYF-PEGIDI 152 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~--g~-~~v--~~~~~~~~~~~~~~~~~-~~~~d~ 152 (268)
++.++||+||+|++|..++..+...|++|+++++++++.+.+.+++ +. ... .|..+.+.....+.... .+.+|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999999999999999999999999999999988776665343 11 112 23333212222222211 247899
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9998874
No 230
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.38 E-value=0.0086 Score=47.38 Aligned_cols=174 Identities=20% Similarity=0.196 Sum_probs=98.2
Q ss_pred cCc--chHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHhcCCCe-eeecCChhh---HHHHHHHHCCCCccEEEeC
Q 024411 87 AAS--GAVGQLVGQFAKLLGCYVVGSAGSKDK----VDLLKNKFGFDE-AFNYKEEAD---LNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 87 ga~--g~~G~~~i~l~~~~g~~V~~~~~~~~~----~~~~~~~~g~~~-v~~~~~~~~---~~~~~~~~~~~~~d~v~d~ 156 (268)
|++ +++|.++++.+...|++|+++.++.++ .+.+.++.+... ..|..++++ +.+.+.+..+|.+|+++++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 445 899999999999999999999999987 444443555431 234433322 3333444443679999887
Q ss_pred CCh--h----------------------------hHHhHHHhhhcCCEEEEEcccccccCCCCccccc------------
Q 024411 157 VGG--K----------------------------LLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN------------ 194 (268)
Q Consensus 157 ~g~--~----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~------------ 194 (268)
++. . ..+.+.+.++++|.++.++...............
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~ 160 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS 160 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence 653 1 0344566788899999887654322111000000
Q ss_pred -hHHHHh-cceeeeeEEecccccchHHHH---HHHHHHHHcCCceeeeehhcccccHHHHHHHHHcCC---ccceEE
Q 024411 195 -LMYLVS-KRLRMEGFIVLDHYHLYPKFL---EMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQ---NVGKQV 263 (268)
Q Consensus 195 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~---~~gkvv 263 (268)
-..+-. +++++.....+.......+.+ ++..+.+.+. .+..+....+|+.++..+|.+.. ..|.++
T Consensus 161 lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~---~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i 234 (241)
T PF13561_consen 161 LAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKR---IPLGRLGTPEEVANAVLFLASDAASYITGQVI 234 (241)
T ss_dssp HHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHH---STTSSHBEHHHHHHHHHHHHSGGGTTGTSEEE
T ss_pred HHHHhccccCeeeeeecccceeccchhccccccchhhhhhhh---hccCCCcCHHHHHHHHHHHhCccccCccCCeE
Confidence 011224 577777777655533222222 3333333221 11223345778999988887633 556443
No 231
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.38 E-value=0.0014 Score=52.06 Aligned_cols=80 Identities=15% Similarity=0.286 Sum_probs=53.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eeecCChhhHHHHHHHHCC--CCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 150 (268)
+++++||+|++|++|+.+++.+...|++|++++++.++.+.+.++ .+.. . ..|..+.+...+.+..... +.+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467899999999999999999999999999999887765544322 2332 1 2233332133333333221 368
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|.++.++|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 232
>PRK06128 oxidoreductase; Provisional
Probab=97.38 E-value=0.0037 Score=51.28 Aligned_cols=104 Identities=21% Similarity=0.271 Sum_probs=63.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHH----HHHHhcCCCe-e--eecCChhhHHHHHHHHC--C
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVD----LLKNKFGFDE-A--FNYKEEADLNAALKRYF--P 147 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~--~~~----~~~~~~g~~~-v--~~~~~~~~~~~~~~~~~--~ 147 (268)
.++++||+||+|++|..++..+...|++|+++.++.+ +.+ .++ ..+... . .|..+.+...+.+.+.. .
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999998875432 222 222 334321 1 23333313333333221 2
Q ss_pred CCccEEEeCCChh---------------------------hHHhHHHhhhcCCEEEEEccccc
Q 024411 148 EGIDIYFENVGGK---------------------------LLDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 148 ~~~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
+++|+++.++|.. .++.+++.+..+|+++.++....
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~ 195 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS 195 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence 3699999988731 02233444556789988876543
No 233
>PRK08589 short chain dehydrogenase; Validated
Probab=97.38 E-value=0.0014 Score=52.94 Aligned_cols=80 Identities=20% Similarity=0.260 Sum_probs=52.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
+++++||+||++++|..+++.+...|++|++++++ ++.+.+.+++ +.. . ..|..+.++....+.+.. .+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 46799999999999999999999999999999988 4433322132 221 1 234444323333333322 2368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|++++++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999998873
No 234
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.37 E-value=0.0017 Score=51.11 Aligned_cols=79 Identities=16% Similarity=0.186 Sum_probs=52.7
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCCCe-eeecCChhhHHHHHHHHCC--CCccEEEe
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNKFGFDE-AFNYKEEADLNAALKRYFP--EGIDIYFE 155 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~-~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d 155 (268)
++++||+||++++|..+++.+...|++|+++++++++. +.++ ..+... ..|..+.++....+.+... +++|+++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 46899999999999999999999999999999876543 3333 444321 2343333233333333322 36899999
Q ss_pred CCCh
Q 024411 156 NVGG 159 (268)
Q Consensus 156 ~~g~ 159 (268)
++|.
T Consensus 81 ~ag~ 84 (236)
T PRK06483 81 NASD 84 (236)
T ss_pred CCcc
Confidence 8873
No 235
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.37 E-value=0.0027 Score=53.27 Aligned_cols=93 Identities=17% Similarity=0.133 Sum_probs=65.1
Q ss_pred cEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcC---C-CeeeecCChhhHHHHHHHHCCCCccEEEe
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFG---F-DEAFNYKEEADLNAALKRYFPEGIDIYFE 155 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~~~g---~-~~v~~~~~~~~~~~~~~~~~~~~~d~v~d 155 (268)
.+|||+|+ |++|+.+++.+...+ .+|++++++.++.+.+. ... . ...+|-.+.+.+.+-++ ++|+||+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~-----~~d~VIn 74 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIK-----DFDLVIN 74 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHh-----cCCEEEE
Confidence 47899998 999999999988888 79999999999988886 442 2 12445544323334443 3699999
Q ss_pred CCChhhHHhHHH-hhhcCCEEEEEcc
Q 024411 156 NVGGKLLDAVLP-NMKIRGRIAACGM 180 (268)
Q Consensus 156 ~~g~~~~~~~~~-~l~~~G~~v~~g~ 180 (268)
+.....-..+++ +++.+=.++.+..
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEccc
Confidence 999854445554 4555556666644
No 236
>PRK08643 acetoin reductase; Validated
Probab=97.37 E-value=0.0012 Score=52.61 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=53.7
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCcc
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
+++++|+|++|++|..+++.+...|++|+++++++++.+.+.+++ +.. . ..|..+.+.+.+.+.+.. .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999999999998877655443222 221 1 124444323333333322 13689
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
+++.++|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99998863
No 237
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.37 E-value=0.0015 Score=52.10 Aligned_cols=81 Identities=21% Similarity=0.356 Sum_probs=54.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-ee--eecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.++++||+||+|++|..+++.+...|++|+.+.+++++.+.+.+++ +.. .. .|..+.+.+...+.+.. .+.+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999998877655443232 221 11 24444323333333321 1368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.++|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999998873
No 238
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=97.37 E-value=0.0096 Score=48.01 Aligned_cols=108 Identities=17% Similarity=0.252 Sum_probs=75.3
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----CeeeecCChh---hHHHHHHHHCCC-
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEA---DLNAALKRYFPE- 148 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~---~~~~~~~~~~~~- 148 (268)
..+++-|+|+|+.+|.|..++.-+...|.+|++.+-.++..+.++.+... +-.+|..+++ ...+.+++..++
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 45677899999999999999999999999999999887776766633311 1134555432 344555566665
Q ss_pred CccEEEeCCCh---------------------------hhHHhHHHhhhc-CCEEEEEcccccc
Q 024411 149 GIDIYFENVGG---------------------------KLLDAVLPNMKI-RGRIAACGMISQY 184 (268)
Q Consensus 149 ~~d~v~d~~g~---------------------------~~~~~~~~~l~~-~G~~v~~g~~~~~ 184 (268)
+.--+++++|- +.....+.++++ .||+|.+++..+.
T Consensus 106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 77778888871 113344555665 7999999887664
No 239
>PRK09242 tropinone reductase; Provisional
Probab=97.37 E-value=0.0015 Score=52.17 Aligned_cols=81 Identities=23% Similarity=0.322 Sum_probs=54.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCC-e--eeecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~~~~--~~ 148 (268)
.+++++|+|++|++|..+++.+...|++|++++++.++.+.+.+++ +.. . ..|..+.++....+.+.. .+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999887665544232 111 1 124433313333333221 23
Q ss_pred CccEEEeCCCh
Q 024411 149 GIDIYFENVGG 159 (268)
Q Consensus 149 ~~d~v~d~~g~ 159 (268)
++|+++.++|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 240
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.36 E-value=0.0018 Score=52.43 Aligned_cols=105 Identities=12% Similarity=0.142 Sum_probs=68.1
Q ss_pred CCcEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eeecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~--g~~G~~~i~l~~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
.++.++|+||+ +++|.++++.+...|++|+++.++.+ +.+.+.++++... ..|..+.+.....+.+.. .+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899999996 79999999999999999999988742 3333332444322 234544323333333332 247
Q ss_pred ccEEEeCCCh-h-----------------------------hHHhHHHhhhcCCEEEEEccccc
Q 024411 150 IDIYFENVGG-K-----------------------------LLDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 150 ~d~v~d~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
+|++++++|. . ..+..++.+..+|+++.++...+
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~ 147 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG 147 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence 9999999873 1 02345556667799998876543
No 241
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0017 Score=51.58 Aligned_cols=79 Identities=19% Similarity=0.295 Sum_probs=53.3
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCC-e--eeecCChhhHHHHHHHHC--CCC
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
+++++|+||+|++|..+++.+...|++|+++.+++++.+.+.+.+ +.. . ..|..+.+.+.+.+.+.. -++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999888888999999999887765543221 111 1 234444323333333322 136
Q ss_pred ccEEEeCCC
Q 024411 150 IDIYFENVG 158 (268)
Q Consensus 150 ~d~v~d~~g 158 (268)
+|+++.++|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 899999887
No 242
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0015 Score=51.98 Aligned_cols=80 Identities=16% Similarity=0.211 Sum_probs=52.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+.+++|+|++|++|..+++.+...|++|+++.+++++.+.+.+.+ +.. . ..|..+.+.....+.+.. .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999999889999999998876554433222 211 1 234443312332222221 1368
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|++|.++|
T Consensus 85 d~vi~~ag 92 (250)
T PRK07774 85 DYLVNNAA 92 (250)
T ss_pred CEEEECCC
Confidence 99999887
No 243
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0015 Score=52.94 Aligned_cols=79 Identities=15% Similarity=0.270 Sum_probs=53.7
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC---e--eeecCChhhHHHHHHHHC--CCC
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---E--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
++++||+||+|++|..++..+...|++|+++++++++.+.+.+. .+.. . ..|..+.+++.. +.+.. -++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~ 81 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR 81 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence 56899999999999999999999999999999888766554322 2211 1 224444323333 44332 136
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|+++.++|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999998873
No 244
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.35 E-value=0.0015 Score=52.59 Aligned_cols=82 Identities=20% Similarity=0.333 Sum_probs=57.6
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC------eeeecCCh---hhHHHHHHHH
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD------EAFNYKEE---ADLNAALKRY 145 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~------~v~~~~~~---~~~~~~~~~~ 145 (268)
-.++.+||+|++.++|.+++..+...|++|+++.+++++.+...+.+ +.. .+.|.... +.+.....+.
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999988765544232 221 12233332 1233333344
Q ss_pred CCCCccEEEeCCCh
Q 024411 146 FPEGIDIYFENVGG 159 (268)
Q Consensus 146 ~~~~~d~v~d~~g~ 159 (268)
..|+.|++++.+|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 35689999998874
No 245
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0023 Score=51.20 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=54.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-ee--eecCChhhHHHHHHHHCCCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-EA--FNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~~~~~~~~~~d 151 (268)
.+++++|+|+++++|..+++.+...|++|+++++++++.+.+.+++ +.. .. .|..+.++....+... +.+|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 4689999999999999999999999999999999887665543222 221 12 3444332333333322 4699
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
.++.++|.
T Consensus 84 ~lv~~ag~ 91 (259)
T PRK06125 84 ILVNNAGA 91 (259)
T ss_pred EEEECCCC
Confidence 99998873
No 246
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0024 Score=51.66 Aligned_cols=80 Identities=25% Similarity=0.250 Sum_probs=54.6
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-ee--eecCChhhHHHHHHHHC--CCCccEEE
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EA--FNYKEEADLNAALKRYF--PEGIDIYF 154 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~~~~--~~~~d~v~ 154 (268)
+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+..+.. .. .|..+.+++...+.... -+++|.++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999889999999999888776655333322 12 23333323333333221 13689999
Q ss_pred eCCCh
Q 024411 155 ENVGG 159 (268)
Q Consensus 155 d~~g~ 159 (268)
.++|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99874
No 247
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0017 Score=51.71 Aligned_cols=80 Identities=20% Similarity=0.311 Sum_probs=53.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-ee--eecCChhhHHHHHHHHCC--CCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYFP--EGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~~--~~~ 150 (268)
++.+++|+||+|++|..+++.+...|++|+.++++.++.+.+.+++ +.. .. .|..+.++....+.+... +.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999999999998877655544232 221 11 233332133333332211 358
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|+++.++|
T Consensus 87 d~li~~ag 94 (252)
T PRK07035 87 DILVNNAA 94 (252)
T ss_pred CEEEECCC
Confidence 99998887
No 248
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0017 Score=50.99 Aligned_cols=80 Identities=10% Similarity=0.157 Sum_probs=54.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eeecCChhhHHHHHHH---HCCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKR---YFPEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~---~~~~~ 149 (268)
++++++|+|+++++|.+++.-+...|++|+++.++.++.+.+.++ .+.. . ..|..+.++....+.+ ..++.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 467999999999999999999999999999999988876554322 2332 1 1233333233333333 22226
Q ss_pred ccEEEeCCC
Q 024411 150 IDIYFENVG 158 (268)
Q Consensus 150 ~d~v~d~~g 158 (268)
+|++++++|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 249
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0015 Score=51.87 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=54.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-ee--eecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--GFD-EA--FNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
++.+++|+||+|++|..+++.+...|++|+.++++.++.+...+.. +.. .. .|..+.+...+.+.+.. .+.+|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4578999999999999999988888999999999887655444233 221 12 24333323333333322 13689
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
+++.++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99998873
No 250
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.31 E-value=0.00088 Score=53.95 Aligned_cols=101 Identities=21% Similarity=0.305 Sum_probs=61.4
Q ss_pred HhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeeecCChhhHHHHHHHHC
Q 024411 70 GFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYF 146 (268)
Q Consensus 70 ~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~ 146 (268)
.+...+++++|++||-+|+ |-|..++.+++..|++|++++.|++..+.+++ +.|....+..... ++ ++.
T Consensus 53 ~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~----~~~- 124 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DY----RDL- 124 (273)
T ss_dssp HHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--G----GG--
T ss_pred HHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ec----ccc-
Confidence 3446678999999999996 47888999999999999999999998877653 3454321111111 21 111
Q ss_pred CCCccEEEe-----CCCh----hhHHhHHHhhhcCCEEEEE
Q 024411 147 PEGIDIYFE-----NVGG----KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 147 ~~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~~ 178 (268)
.+.||.|+. .+|. ..+..+.+.|+|+|++++-
T Consensus 125 ~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 125 PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp --S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 126888753 5553 3467888999999998754
No 251
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.31 E-value=0.0024 Score=51.60 Aligned_cols=80 Identities=13% Similarity=0.131 Sum_probs=52.7
Q ss_pred CCcEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHhcCCCe--eeecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKV---DLLKNKFGFDE--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g--~~G~~~i~l~~~~g~~V~~~~~~~~~~---~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
+++.+||+||++ ++|.++++.+...|++|+++.++++.. +.+.++.+... ..|..+.++....+.+.. .|.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 568999999986 999999999999999999988765322 22322344322 234444323333333322 147
Q ss_pred ccEEEeCCC
Q 024411 150 IDIYFENVG 158 (268)
Q Consensus 150 ~d~v~d~~g 158 (268)
+|++++++|
T Consensus 86 iD~lVnnAG 94 (271)
T PRK06505 86 LDFVVHAIG 94 (271)
T ss_pred CCEEEECCc
Confidence 999999887
No 252
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0013 Score=53.00 Aligned_cols=78 Identities=18% Similarity=0.362 Sum_probs=53.2
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhHHHHHHHHC--CCCccEEEe
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDIYFE 155 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v~d 155 (268)
.+++++|+||+|++|..+++.+...|++|++++++.++.+... +... ..|..+.+++...+.+.. .+.+|++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3568999999999999999999999999999998866543221 2221 234444324444443322 236899999
Q ss_pred CCCh
Q 024411 156 NVGG 159 (268)
Q Consensus 156 ~~g~ 159 (268)
++|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9884
No 253
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0025 Score=51.55 Aligned_cols=80 Identities=11% Similarity=0.091 Sum_probs=53.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-----CC-ee--eecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-----FD-EA--FNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~~~~~~--~~ 148 (268)
++.++||+|++|++|..+++.+...|++|+++++++++.+...+++. .. .. .|..+.+.....+.+.. .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999999999988776544332221 11 12 24433323333333322 13
Q ss_pred CccEEEeCCC
Q 024411 149 GIDIYFENVG 158 (268)
Q Consensus 149 ~~d~v~d~~g 158 (268)
.+|+++.++|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 254
>PRK06720 hypothetical protein; Provisional
Probab=97.30 E-value=0.0025 Score=47.56 Aligned_cols=81 Identities=14% Similarity=0.236 Sum_probs=52.2
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-ee--eecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+..++|+||++++|..++..+...|++|+++.++.+..+...+++ +.. .. .|....+.+.+.+.+.. .+.+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5679999999999999999999889999999998876554332122 322 12 23333213333222211 2468
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|++++++|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 999988873
No 255
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.29 E-value=0.015 Score=42.62 Aligned_cols=100 Identities=22% Similarity=0.237 Sum_probs=63.7
Q ss_pred HHHHhhhhcC-CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHH
Q 024411 67 AYVGFYEVCS-PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRY 145 (268)
Q Consensus 67 a~~~l~~~~~-~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 145 (268)
.+.++.+..+ +-.|++++|.|= |-+|...++.++.+|++|+++...+-+.-++. .-|.. +. .+.+.+
T Consensus 9 ~~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~--- 76 (162)
T PF00670_consen 9 LVDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEAL--- 76 (162)
T ss_dssp HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHT---
T ss_pred HHHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHH---
Confidence 3344443333 467899999995 99999999999999999999998887666655 44442 22 222222
Q ss_pred CCCCccEEEeCCChhh--HHhHHHhhhcCCEEEEEcc
Q 024411 146 FPEGIDIYFENVGGKL--LDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 146 ~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~ 180 (268)
...|+++.++|+.. -.+-++.|+.+..+..+|.
T Consensus 77 --~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh 111 (162)
T PF00670_consen 77 --RDADIFVTATGNKDVITGEHFRQMKDGAILANAGH 111 (162)
T ss_dssp --TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred --hhCCEEEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence 24899999999844 3577888888887777765
No 256
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0022 Score=51.42 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=52.6
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eeecCChhhHHHHHHHHCC--CCccE
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYFP--EGIDI 152 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~ 152 (268)
.++||+||+|++|..+++.+...|++|+++++++.+.+.+.+. .+.. . ..|..+.+.+...+.+... +++|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999999999999987765443322 2322 1 2233333233333333221 36899
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
++.++|.
T Consensus 82 vi~~ag~ 88 (263)
T PRK06181 82 LVNNAGI 88 (263)
T ss_pred EEECCCc
Confidence 9999873
No 257
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0019 Score=51.43 Aligned_cols=81 Identities=15% Similarity=0.183 Sum_probs=53.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-ee--eecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD-EA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+ +.+.. .. .|..+.+++...+.+.. .+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999998999999999998876544332 22322 12 23333212333222221 1368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.++|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999998873
No 258
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.003 Score=50.42 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=54.1
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC--e--eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
+++++|+||+|++|..++..+...|++|++++++.++.+.+.+.+... . ..|..+.+.+...+.+.. .+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999999998889999999999887766554233211 1 234433323333333321 1368999
Q ss_pred EeCCCh
Q 024411 154 FENVGG 159 (268)
Q Consensus 154 ~d~~g~ 159 (268)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999873
No 259
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.28 E-value=0.0029 Score=49.97 Aligned_cols=81 Identities=21% Similarity=0.318 Sum_probs=54.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-e--eecCChhhHHHHHHHHCC--CCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE-A--FNYKEEADLNAALKRYFP--EGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~~~~~~~--~~~ 150 (268)
++.++||+|++|++|..+++.+...|.+|+++.+++++.+...+ ..+... . .|..+.+.+...+.+... +.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34689999999999999999999999999999998876554432 223221 1 244443233333333211 368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|.++.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999998864
No 260
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.28 E-value=0.0083 Score=45.85 Aligned_cols=77 Identities=21% Similarity=0.268 Sum_probs=53.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC----CCe-eeecCChhhHHHHHHHHCCCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG----FDE-AFNYKEEADLNAALKRYFPEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~~~~~~~~~~d~v 153 (268)
++.+++|+|++|++|..++..+...|++|+++.++.++.+.+.+.+. ... ..+..+.++..+.+. ++|++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence 56789999999999999999888889999999999887766553332 221 122222112333332 48999
Q ss_pred EeCCChh
Q 024411 154 FENVGGK 160 (268)
Q Consensus 154 ~d~~g~~ 160 (268)
+.++...
T Consensus 102 i~at~~g 108 (194)
T cd01078 102 FAAGAAG 108 (194)
T ss_pred EECCCCC
Confidence 9988753
No 261
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.26 E-value=0.0021 Score=50.67 Aligned_cols=81 Identities=20% Similarity=0.270 Sum_probs=53.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-ee--eecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+.+++|+|++|++|..++..+...|++|+++++++++.+...+++ +.. .+ .|..+.+.+...+++.. .+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999999999999999998899999999999877654432122 221 11 23333323444444322 1368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|.++.++|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999998874
No 262
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=97.26 E-value=0.011 Score=41.66 Aligned_cols=93 Identities=19% Similarity=0.220 Sum_probs=58.1
Q ss_pred EEEecCcchHHHHHHHHHHHcC--CEEEEEeC--CHHHH-HHHHHhcCCCeeeecCChhhHHHHHH--------------
Q 024411 83 VFISAASGAVGQLVGQFAKLLG--CYVVGSAG--SKDKV-DLLKNKFGFDEAFNYKEEADLNAALK-------------- 143 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~--~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~-------------- 143 (268)
|.|+|+||++|..++++.+.+. ++|+.... +-+++ ++++ ++.+..+.-.++ .....++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~--~~~~~l~~~~~~~~~~~~v~~ 77 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADE--EAYEELKKALPSKGPGIEVLS 77 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSH--HHHHHHHHHHHHTTSSSEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCH--HHHHHHHHHhhhcCCCCEEEe
Confidence 5799999999999999999997 58887763 22333 3344 777776654443 2222222
Q ss_pred ------HHCC-CCccEEEeCCCh-hhHHhHHHhhhcCCEEEEE
Q 024411 144 ------RYFP-EGIDIYFENVGG-KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 144 ------~~~~-~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 178 (268)
+... ..+|+++.+..+ ..+.-.+..++.+-++.+.
T Consensus 78 G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLA 120 (129)
T PF02670_consen 78 GPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALA 120 (129)
T ss_dssp SHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE-
T ss_pred ChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEe
Confidence 2222 268888887665 7778888888877665543
No 263
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.26 E-value=0.0023 Score=51.23 Aligned_cols=81 Identities=17% Similarity=0.264 Sum_probs=53.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe-e--eecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE-A--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
++.++||+|++|++|..+++.+...|++|+++.+++++.+.+.++ .+... . .|..+.+...+.+.+.. .+.+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999988665444322 33321 1 23333312333222221 1368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999998873
No 264
>PRK07985 oxidoreductase; Provisional
Probab=97.26 E-value=0.0045 Score=50.62 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=64.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---hcCCC---eeeecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~--~~~~~~~~---~~g~~---~v~~~~~~~~~~~~~~~~~--~~ 148 (268)
.++++||+||++++|..+++.+...|++|+++.++. ++.+.+.+ +.+.. ...|..+.+.....+.+.. .+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 567899999999999999999999999999876542 23333321 22322 1224444323333333322 23
Q ss_pred CccEEEeCCCh-h--------------------------hHHhHHHhhhcCCEEEEEccccc
Q 024411 149 GIDIYFENVGG-K--------------------------LLDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 149 ~~d~v~d~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
++|+++.++|. . .++.+++.++.+|+++.++....
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~ 189 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence 68999988763 1 02334445556789998876543
No 265
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0031 Score=50.16 Aligned_cols=74 Identities=24% Similarity=0.366 Sum_probs=49.2
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHhcCCCe--eeecCChhhHHHHHHHHCCCCccEEEe
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDIYFE 155 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~-~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d 155 (268)
.+++++|+||+|++|..+++.+...|++|+++++++ +..+... .+... ..|..+. + .+.+.. +.+|++++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~-~---~~~~~~-~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--ESPNEWIKWECGKE-E---SLDKQL-ASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--cCCCeEEEeeCCCH-H---HHHHhc-CCCCEEEE
Confidence 357899999999999999999999999999999876 2222211 11112 2344332 1 222222 36999999
Q ss_pred CCCh
Q 024411 156 NVGG 159 (268)
Q Consensus 156 ~~g~ 159 (268)
++|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9874
No 266
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.25 E-value=0.0023 Score=51.12 Aligned_cols=79 Identities=13% Similarity=0.090 Sum_probs=51.9
Q ss_pred CCcEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC--e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~--g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+++++|+||+ +++|.++++.+...|++|+++.++++..+.+. ++... . ..|..+.++..+.+.+.. .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999998 79999999999999999999988744333333 33221 1 234444323333333322 1469
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|++++++|
T Consensus 85 D~lv~nAg 92 (252)
T PRK06079 85 DGIVHAIA 92 (252)
T ss_pred CEEEEccc
Confidence 99999887
No 267
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.25 E-value=0.003 Score=50.35 Aligned_cols=80 Identities=18% Similarity=0.264 Sum_probs=52.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHhcCCC-e--eeecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--VDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~--~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
+++++||+||++++|.++++.+...|++|+++.++... .+.++ +.+.. . ..|..+.++..+.+.+.. .+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999988765432 12222 34432 1 234444423333333321 23699
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
++++++|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99998873
No 268
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.25 E-value=0.0033 Score=50.14 Aligned_cols=80 Identities=20% Similarity=0.293 Sum_probs=53.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+.++||+|++|++|..+++.+...|++|+++++++++.+.+.+++ +.. . ..|..+.+++...+.+.. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999889999999999887655443222 322 1 224444323333333221 1368
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|+++.++|
T Consensus 83 d~vi~~a~ 90 (258)
T PRK12429 83 DILVNNAG 90 (258)
T ss_pred CEEEECCC
Confidence 99999886
No 269
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.24 E-value=0.0035 Score=49.52 Aligned_cols=81 Identities=22% Similarity=0.349 Sum_probs=54.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-ee--eecCChhhHHHHHHHHC--CCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EA--FNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
++.+++|+||+|++|..++..+...|+.|+...++.++.+.+.+..+.. .. .|..+.+.+...+.+.. .+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999999999999999999999999998888877766554244432 12 23333313333333221 1369999
Q ss_pred EeCCCh
Q 024411 154 FENVGG 159 (268)
Q Consensus 154 ~d~~g~ 159 (268)
+.++|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999873
No 270
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0059 Score=48.61 Aligned_cols=105 Identities=17% Similarity=0.221 Sum_probs=63.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHhc---CCC-ee--eecCChh---hHHHHHHH----
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKNKF---GFD-EA--FNYKEEA---DLNAALKR---- 144 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~-~~~~~~~~~~~~~---g~~-~v--~~~~~~~---~~~~~~~~---- 144 (268)
.+++++|+|+++++|..+++.+...|++|++.. +++++.+...+++ +.. .. .|..+.+ .+.+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 467999999999999999999999999998874 4445443322122 221 11 2222211 22222322
Q ss_pred HCC-CCccEEEeCCCh-h---h----------------------HHhHHHhhhcCCEEEEEccccc
Q 024411 145 YFP-EGIDIYFENVGG-K---L----------------------LDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 145 ~~~-~~~d~v~d~~g~-~---~----------------------~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
..+ +++|++++++|. . . .+.+++.+...|+++.+++...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 112 269999998873 1 0 1234555566789999887654
No 271
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.24 E-value=0.00055 Score=59.55 Aligned_cols=94 Identities=17% Similarity=0.159 Sum_probs=62.2
Q ss_pred hcCCCCCcEEE----EecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCChhhHHHHHHHHCCC
Q 024411 74 VCSPKHGECVF----ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPE 148 (268)
Q Consensus 74 ~~~~~~~~~vl----I~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~ 148 (268)
+.++++++.+| |+||+|++|.+++|+++..|++|+.+.+++.+....+ ..+.. .+++.+.. .+.+.+...
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~--- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKAL--- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHH---
Confidence 45778899988 9999999999999999999999999886655333222 23333 34555443 233333221
Q ss_pred CccEEEeCCChhhHHhHHHhhhcCCEEEEEcccc
Q 024411 149 GIDIYFENVGGKLLDAVLPNMKIRGRIAACGMIS 182 (268)
Q Consensus 149 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 182 (268)
...+...++.+.++|+++.++...
T Consensus 103 ----------~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 103 ----------YEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred ----------HHHHHHHHHhccCCCEEEEEcccc
Confidence 023455667777788888877643
No 272
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.23 E-value=0.0025 Score=51.55 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=53.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+++++|+||+|++|..++..+...|++|+++.+++++.+.+.+++ +.. . ..|..+.+.....+.+.. -+.+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999999999999999999999999999998877655443232 221 1 223333312333333221 1369
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|+++.++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999887
No 273
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.22 E-value=0.0029 Score=50.63 Aligned_cols=79 Identities=24% Similarity=0.248 Sum_probs=52.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC---eeeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.++++||+||+|++|..+++.+...|++|+++++++...+... ++ +.. ...|..+.++....+.+.. .+.+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999999999998754322222 22 322 1234444323333333322 2369
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|+++.++|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999887
No 274
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0019 Score=51.62 Aligned_cols=80 Identities=15% Similarity=0.181 Sum_probs=53.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCCC-e--eeecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN--KFGFD-E--AFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~--~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
++.++||+||+|++|..+++.+...|++|+++++++++.+...+ +.+.. . ..|..+.+++...+.+.. .+++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 46789999999999999999999999999999988776533330 22322 1 234444323333333322 13689
Q ss_pred EEEeCCC
Q 024411 152 IYFENVG 158 (268)
Q Consensus 152 ~v~d~~g 158 (268)
+++.++|
T Consensus 86 ~vi~~ag 92 (258)
T PRK08628 86 GLVNNAG 92 (258)
T ss_pred EEEECCc
Confidence 9999988
No 275
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.22 E-value=0.0035 Score=50.36 Aligned_cols=97 Identities=22% Similarity=0.279 Sum_probs=70.7
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCChhhHHHHHHHHCCCCccEEEe
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDIYFE 155 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d 155 (268)
+.+++ |.|+|+ |-+|.-++.+|.-+|++|.+.+.+.++++.+.+.++-. ++. +.....+.+.+. +.|+++.
T Consensus 166 V~~~k-v~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~-~st~~~iee~v~-----~aDlvIg 237 (371)
T COG0686 166 VLPAK-VVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTL-YSTPSNIEEAVK-----KADLVIG 237 (371)
T ss_pred CCCcc-EEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEE-EcCHHHHHHHhh-----hccEEEE
Confidence 34444 667786 99999999999999999999999999999988556554 233 222224444444 3888887
Q ss_pred CC---Ch----hhHHhHHHhhhcCCEEEEEccc
Q 024411 156 NV---GG----KLLDAVLPNMKIRGRIAACGMI 181 (268)
Q Consensus 156 ~~---g~----~~~~~~~~~l~~~G~~v~~g~~ 181 (268)
++ |. -..++..+.|+|++.++.+.-.
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCCcEEEEEEEc
Confidence 54 22 2467889999999999988653
No 276
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0064 Score=49.66 Aligned_cols=105 Identities=20% Similarity=0.215 Sum_probs=63.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCCe-e--eecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFDE-A--FNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~-~~~~~~~---~~g~~~-v--~~~~~~~~~~~~~~~~~--~~~ 149 (268)
++.++||+||+|++|..++..+...|++|+++.++.. ..+.+.+ ..+... . .|..+.+.+...+.+.. .+.
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999889999999887643 2222211 223221 1 23333323333333321 136
Q ss_pred ccEEEeCCChh----h-----------------------HHhHHHhhhcCCEEEEEccccc
Q 024411 150 IDIYFENVGGK----L-----------------------LDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 150 ~d~v~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
+|+++.++|.. . ++.+++.+++.|+++.++....
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~ 185 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG 185 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 89999887731 0 1223444556789998876543
No 277
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.011 Score=47.07 Aligned_cols=80 Identities=18% Similarity=0.213 Sum_probs=50.9
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHhc---CCC-ee--eecCChhhHHHHHHHH---C---
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRY---F--- 146 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~-~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~---~--- 146 (268)
+.+++|+|++|++|..+++.+...|++|++. .++.++.+...+.+ +.. .. .|..+.++....+++. .
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~ 85 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR 85 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence 5789999999999999999999899998775 56665543332122 221 12 2444432333333332 1
Q ss_pred -C-CCccEEEeCCCh
Q 024411 147 -P-EGIDIYFENVGG 159 (268)
Q Consensus 147 -~-~~~d~v~d~~g~ 159 (268)
+ +++|+++.++|.
T Consensus 86 ~~~~~id~vi~~ag~ 100 (254)
T PRK12746 86 VGTSEIDILVNNAGI 100 (254)
T ss_pred cCCCCccEEEECCCC
Confidence 1 268999998874
No 278
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.19 E-value=0.0052 Score=50.85 Aligned_cols=94 Identities=16% Similarity=0.202 Sum_probs=60.8
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-eecCChhhHHHHHHHHCCCCccEEEeCCChh
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDIYFENVGGK 160 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 160 (268)
+|+|+||+|-+|..+++.+...|.+|.+++++.++...+. ..+...+ .|..+.+.+...+ . ++|+|+.+++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al----~-g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSF----K-GVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHH----C-CCCEEEECCCCC
Confidence 6999999999999999999999999999999876655544 4454322 2333321222222 2 489999987631
Q ss_pred h-------------HHhHHHhhhcCC--EEEEEccc
Q 024411 161 L-------------LDAVLPNMKIRG--RIAACGMI 181 (268)
Q Consensus 161 ~-------------~~~~~~~l~~~G--~~v~~g~~ 181 (268)
. ....++.++..| +++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 0 123444444444 78877653
No 279
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0092 Score=47.17 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=50.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCC-ee--eecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD-EA--FNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~-~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~--~~~ 149 (268)
++.+++|+|++|++|..+++.+...|++|+.+.++.. ..+.+.+ ..+.. .. .|..+.+++.+.+.+.. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999999999888775433 2222211 22321 12 23333323333333321 136
Q ss_pred ccEEEeCCC
Q 024411 150 IDIYFENVG 158 (268)
Q Consensus 150 ~d~v~d~~g 158 (268)
+|+++.++|
T Consensus 84 id~vi~~ag 92 (245)
T PRK12937 84 IDVLVNNAG 92 (245)
T ss_pred CCEEEECCC
Confidence 899999887
No 280
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.18 E-value=0.0033 Score=50.79 Aligned_cols=82 Identities=13% Similarity=0.169 Sum_probs=53.4
Q ss_pred CCCCcEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHhcCCCe--eeecCChhhHHHHHHHHC--C
Q 024411 77 PKHGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK---DKVDLLKNKFGFDE--AFNYKEEADLNAALKRYF--P 147 (268)
Q Consensus 77 ~~~~~~vlI~ga~--g~~G~~~i~l~~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~--~ 147 (268)
.-.++.+||+||+ +++|.+++..+...|++|+++.+++ ++.+.+.++++... ..|..+.++....+.+.. .
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 3456899999996 7999999999999999999887764 33344432445322 234444323333333322 2
Q ss_pred CCccEEEeCCC
Q 024411 148 EGIDIYFENVG 158 (268)
Q Consensus 148 ~~~d~v~d~~g 158 (268)
+.+|++++++|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 46999999886
No 281
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.18 E-value=0.0042 Score=49.73 Aligned_cols=80 Identities=13% Similarity=0.162 Sum_probs=51.6
Q ss_pred CCcEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHhcCCCee--eecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDK---VDLLKNKFGFDEA--FNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~--g~~G~~~i~l~~~~g~~V~~~~~~~~~---~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~--~~~ 149 (268)
.++++||+||+ +++|.++++.+...|++|+++.++++. .+.+.++++.... .|..+.++....+.+.. .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 46899999997 489999999999999999999887543 2333323433222 24333323333333322 146
Q ss_pred ccEEEeCCC
Q 024411 150 IDIYFENVG 158 (268)
Q Consensus 150 ~d~v~d~~g 158 (268)
+|++++++|
T Consensus 89 ld~lv~nAg 97 (258)
T PRK07533 89 LDFLLHSIA 97 (258)
T ss_pred CCEEEEcCc
Confidence 999999886
No 282
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.18 E-value=0.0024 Score=51.09 Aligned_cols=80 Identities=16% Similarity=0.210 Sum_probs=51.9
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.++++||+||++++|..+++.+...|++|++++++ ++.+.+.+ +.+.. . ..|..+.+.....+.+.. .+.+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999877 33332221 23322 1 234444323333333221 1368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|.++.++|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999998873
No 283
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.18 E-value=0.0033 Score=50.13 Aligned_cols=81 Identities=21% Similarity=0.305 Sum_probs=54.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eeecCChhhHHHHHHHHCC--CCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 150 (268)
.+.+++|+||+|++|..++..+...|++|+++.+++++.+.+.++ .+.. . ..|..+.+.+...+.+... +.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999998888999999999987765443322 2321 1 2244443233333333221 368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|.++.++|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999998873
No 284
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0035 Score=50.01 Aligned_cols=81 Identities=21% Similarity=0.186 Sum_probs=52.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCC-e--eeecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~-~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
.+++++|+|+++++|..+++.+...|++|++++++++ ..+.+.+ ..+.. . ..|..+.++..+.+.+.. .+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999999999999999987643 2222211 22322 1 223333323333333321 246
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|+++.++|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999873
No 285
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.17 E-value=0.0049 Score=52.70 Aligned_cols=74 Identities=20% Similarity=0.229 Sum_probs=54.1
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
-.+.+++|+|+ |++|.+++..+...|+ +++++.|+.++.+.+.++++...++.++ ++.+.+. .+|+|++|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEEC
Confidence 45788999997 9999999999999997 8999999988877666466522233221 2222222 49999999
Q ss_pred CChh
Q 024411 157 VGGK 160 (268)
Q Consensus 157 ~g~~ 160 (268)
++.+
T Consensus 250 T~a~ 253 (414)
T PRK13940 250 VNVL 253 (414)
T ss_pred cCCC
Confidence 9974
No 286
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.17 E-value=0.0042 Score=49.83 Aligned_cols=80 Identities=14% Similarity=0.189 Sum_probs=51.5
Q ss_pred CCcEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eeecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g--~~G~~~i~l~~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
.++.++|+||++ ++|.++++.+...|++|+...+++. ..+.+.++.+... ..|..+.++....+.+.. .+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568899999986 8999999988889999999887642 2233322334322 234444323333333322 246
Q ss_pred ccEEEeCCC
Q 024411 150 IDIYFENVG 158 (268)
Q Consensus 150 ~d~v~d~~g 158 (268)
+|++++++|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999998876
No 287
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.17 E-value=0.0048 Score=49.55 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=54.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHCC--CCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 150 (268)
.+.+++|+|+++++|..++..+...|++|+++.+++++.+.+.+.+ +.. . ..|..+.+.....+.+... +.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5678999999999999999988889999999998887655443222 322 1 2344443233333333221 368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.++|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999998873
No 288
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.17 E-value=0.0034 Score=51.85 Aligned_cols=79 Identities=15% Similarity=0.198 Sum_probs=53.9
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCC--C--ee--eecCChhhHHHHHHHHC--CCCc
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGF--D--EA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~~~g~--~--~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
+++++|+||++++|..++..+...| ++|++++++.++.+.+.+++.. . .. .|..+.++....+.+.. .+.+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999999888899 8999999988776655434432 1 11 34444323333333321 2369
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|+++.++|
T Consensus 83 D~lI~nAG 90 (314)
T TIGR01289 83 DALVCNAA 90 (314)
T ss_pred CEEEECCC
Confidence 99999887
No 289
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.16 E-value=0.0034 Score=50.45 Aligned_cols=82 Identities=17% Similarity=0.313 Sum_probs=59.1
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCC---eeeecCChhhHHHHHHHHCCC-C
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK----FGFD---EAFNYKEEADLNAALKRYFPE-G 149 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~~~-~ 149 (268)
+-|++.+|+||+.++|.+-+.=+...|.+|+.+.|+++|++...++ .+.. .++|+.+.+..-+.+++.+.+ .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 3468999999999999775544444999999999999998776543 3431 356877752224555555555 7
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+-+.++++|-
T Consensus 127 VgILVNNvG~ 136 (312)
T KOG1014|consen 127 VGILVNNVGM 136 (312)
T ss_pred eEEEEecccc
Confidence 8899999984
No 290
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.16 E-value=0.0032 Score=49.92 Aligned_cols=81 Identities=20% Similarity=0.234 Sum_probs=52.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-ee--eecCChhhHHHHHHHHCC--CCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD-EA--FNYKEEADLNAALKRYFP--EGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~~--~~~ 150 (268)
.+.+++|+||+|++|..++..+...|++|++++++.++...+.+ ..+.. .. .|..+.+++...+.+... +.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 45789999999999999999999899999999998665443321 22221 12 233333234443333221 268
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|.++.++|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999998764
No 291
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0032 Score=51.27 Aligned_cols=82 Identities=16% Similarity=0.190 Sum_probs=52.8
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHhc---CCCe---eeecCChhhHHHHH
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK---------DKVDLLKNKF---GFDE---AFNYKEEADLNAAL 142 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~---------~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~ 142 (268)
-+++++||+||++++|..+++.+...|++|++++++. ++.+.+.+++ +... ..|..+.++....+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3578999999999999999999999999999987654 3333322122 3221 12444432333333
Q ss_pred HHHC--CCCccEEEeCCCh
Q 024411 143 KRYF--PEGIDIYFENVGG 159 (268)
Q Consensus 143 ~~~~--~~~~d~v~d~~g~ 159 (268)
.+.. .+.+|++++++|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 3322 2479999998874
No 292
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0033 Score=50.05 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=51.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
.+++++|+||+|++|..+++.+...|++|+++++++++ . ..+.. . ..|..+.++....+.... .+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899999999999999999999999999999987654 1 22221 1 234444323333333221 1368999
Q ss_pred EeCCC
Q 024411 154 FENVG 158 (268)
Q Consensus 154 ~d~~g 158 (268)
+.++|
T Consensus 80 i~~ag 84 (252)
T PRK07856 80 VNNAG 84 (252)
T ss_pred EECCC
Confidence 99887
No 293
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.13 E-value=0.003 Score=50.54 Aligned_cols=79 Identities=22% Similarity=0.280 Sum_probs=53.2
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHhcCCC--eeeecCChhh---HHHHHHHHCCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV----DLLKNKFGFD--EAFNYKEEAD---LNAALKRYFPEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~----~~~~~~~g~~--~v~~~~~~~~---~~~~~~~~~~~~ 149 (268)
.|+.|||+||++|+|.+.++=....|+++++.+.+++.. +..+ +.|-. ++.|-.+.++ ..+.+++..+ .
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G-~ 114 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVG-D 114 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcC-C
Confidence 589999999999999998888888899888888766533 3333 33422 2334433223 4444444333 6
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|++++.+|-
T Consensus 115 V~ILVNNAGI 124 (300)
T KOG1201|consen 115 VDILVNNAGI 124 (300)
T ss_pred ceEEEecccc
Confidence 9999999873
No 294
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.13 E-value=0.012 Score=45.40 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=73.6
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCe-eeecCChhhHHHHHHHHC
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKN---KFGFDE-AFNYKEEADLNAALKRYF 146 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~-v~~~~~~~~~~~~~~~~~ 146 (268)
..++....++||=+| +.+|..++.+|..+. .+++.+..++++.+.+++ +.|... +.-.... +..+.+....
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence 345677888999888 678999999998876 489999999998888774 345544 2222212 3344444433
Q ss_pred CCCccEEE-eCCCh---hhHHhHHHhhhcCCEEEEEcc
Q 024411 147 PEGIDIYF-ENVGG---KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 147 ~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~~g~ 180 (268)
.+.||+|| |+.-. ..++.++++|++||.++.-..
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNv 167 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADNV 167 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeec
Confidence 45899887 55432 578999999999998887543
No 295
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=97.12 E-value=0.0047 Score=47.89 Aligned_cols=94 Identities=18% Similarity=0.209 Sum_probs=63.8
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eeecCChhhHHHHHHHHCCCCccEEEe
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDIYFE 155 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d 155 (268)
-++.+||=.|+.|| + +.+-+..+|++|++++.+++..+.++ ...... -++|... ..+++.+. ++.||+|+.
T Consensus 58 l~g~~vLDvGCGgG--~-Lse~mAr~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~--~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGGG--I-LSEPLARLGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA--TVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCcc--H-hhHHHHHCCCeeEEecCChHHHHHHH-Hhhhhccccccchhh--hHHHHHhc-CCCccEEEE
Confidence 37889999998554 3 44445567899999999999999887 332221 2456652 23333322 148999965
Q ss_pred -----CCCh--hhHHhHHHhhhcCCEEEEE
Q 024411 156 -----NVGG--KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 156 -----~~g~--~~~~~~~~~l~~~G~~v~~ 178 (268)
.+.. ..+..+.++++|+|.++..
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 4454 4678899999999987664
No 296
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.12 E-value=0.0034 Score=50.09 Aligned_cols=81 Identities=23% Similarity=0.342 Sum_probs=54.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+.+++|+|+++++|..++..+...|++|++++++.++.+.+.++ .+.. . ..|..+.++..+.+.... .+.+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999887765544322 2222 1 234444323333333221 1368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.++|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999998873
No 297
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.11 E-value=0.0078 Score=48.66 Aligned_cols=152 Identities=19% Similarity=0.197 Sum_probs=88.8
Q ss_pred CCCCCCCeEEeccccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhh-cCCCCCcEEEEecCcchHHHHH
Q 024411 18 PEFNKGDLVWGMTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV-CSPKHGECVFISAASGAVGQLV 96 (268)
Q Consensus 18 ~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~~G~~~ 96 (268)
..++.|++.+...+|.+|..-....+++++| + +.|-... ...|+ .||..+ ..++++.++|=.|.. .|.++
T Consensus 107 ~P~rig~~f~I~Psw~~~~~~~~~~~i~lDP-G--lAFGTG~---HpTT~-lcL~~Le~~~~~g~~vlDvGcG--SGILa 177 (300)
T COG2264 107 HPVRIGERFVIVPSWREYPEPSDELNIELDP-G--LAFGTGT---HPTTS-LCLEALEKLLKKGKTVLDVGCG--SGILA 177 (300)
T ss_pred CcEEeeeeEEECCCCccCCCCCCceEEEEcc-c--cccCCCC---ChhHH-HHHHHHHHhhcCCCEEEEecCC--hhHHH
Confidence 3467788888888888875554455777844 3 4332222 22222 233222 235799999999963 36555
Q ss_pred HHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeee--ecCChhhHHHHHHHHCCCCccEEEeCCC-h---hhHHhHHHhh
Q 024411 97 GQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAF--NYKEEADLNAALKRYFPEGIDIYFENVG-G---KLLDAVLPNM 169 (268)
Q Consensus 97 i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~~~d~v~d~~g-~---~~~~~~~~~l 169 (268)
+..+ .+|+ +|++++-.+...+.+++....+.+- ..... .. .......+.+|+|+-..= . .......+++
T Consensus 178 IAa~-kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~-~~--~~~~~~~~~~DvIVANILA~vl~~La~~~~~~l 253 (300)
T COG2264 178 IAAA-KLGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKG-FL--LLEVPENGPFDVIVANILAEVLVELAPDIKRLL 253 (300)
T ss_pred HHHH-HcCCceEEEecCCHHHHHHHHHHHHHcCCchhhhccc-cc--chhhcccCcccEEEehhhHHHHHHHHHHHHHHc
Confidence 5544 5566 7999998877776666322222111 01110 00 111111237999986543 2 3567888999
Q ss_pred hcCCEEEEEcccc
Q 024411 170 KIRGRIAACGMIS 182 (268)
Q Consensus 170 ~~~G~~v~~g~~~ 182 (268)
+|+|++++.|-..
T Consensus 254 kpgg~lIlSGIl~ 266 (300)
T COG2264 254 KPGGRLILSGILE 266 (300)
T ss_pred CCCceEEEEeehH
Confidence 9999999988643
No 298
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.11 E-value=0.0057 Score=46.63 Aligned_cols=112 Identities=19% Similarity=0.234 Sum_probs=73.9
Q ss_pred hccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeeecCCh
Q 024411 59 ILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEE 135 (268)
Q Consensus 59 ~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~ 135 (268)
++..+.+.|. .+ +...++++++||=+|+ |.|..++-+++..+ +|+.+.+.++=.+.+++ .+|..+|.....+
T Consensus 54 tis~P~~vA~-m~-~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD 128 (209)
T COG2518 54 TISAPHMVAR-ML-QLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGD 128 (209)
T ss_pred eecCcHHHHH-HH-HHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence 3344445554 22 4557999999999994 56999999998888 99999988774444432 5677443222211
Q ss_pred hhHHHHHHHHCCC-CccEEEeCCChhh-HHhHHHhhhcCCEEEEEcc
Q 024411 136 ADLNAALKRYFPE-GIDIYFENVGGKL-LDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 136 ~~~~~~~~~~~~~-~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~ 180 (268)
. ...+... .||.++-+.+.+. -...++.|+++|+++..-.
T Consensus 129 -G----~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 129 -G----SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred -c----ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 1 1111222 7999987777644 4678899999999887644
No 299
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.10 E-value=0.0048 Score=49.38 Aligned_cols=81 Identities=15% Similarity=0.219 Sum_probs=52.5
Q ss_pred CCcEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHhcCCC---eeeecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga--~g~~G~~~i~l~~~~g~~V~~~~~~~--~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
.+++++|+|+ ++++|.++++.+...|++|++++++. +..+.+.++++.. ...|..+.++....+.+.. .+.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 79999999999999999999988653 3334443244331 1234444323333333322 247
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|++++++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998873
No 300
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=97.10 E-value=0.013 Score=49.23 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=65.8
Q ss_pred cEEEEecCcchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHhcCCCeeeecCChhhHHHHHHH------------
Q 024411 81 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEADLNAALKR------------ 144 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~--g~~V~~~~--~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~------------ 144 (268)
++|.|.|++|++|..+++..+.. .++|++++ ++.++.....+++++..+.-.++ .....+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence 47999999999999999998766 56888876 34445544444788876544443 22222322
Q ss_pred ------HCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEE
Q 024411 145 ------YFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 145 ------~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 178 (268)
.... .+|+|+.+.++ ..+.-.+..++.|-++.+.
T Consensus 80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 1222 58999998887 6778888888888777664
No 301
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.09 E-value=0.0052 Score=49.03 Aligned_cols=80 Identities=14% Similarity=0.173 Sum_probs=52.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHhcCCCe-eeecCChhhHHHHHHHHC--CCCccEEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDIYF 154 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~-~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v~ 154 (268)
.+.+++|+||+|++|..+++.+...|++|+++.++. +..+.+. ..+... ..|..+.++....+.+.. .+++|+++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 467899999999999999999999999998876543 3344444 333321 234444323333333322 23689999
Q ss_pred eCCCh
Q 024411 155 ENVGG 159 (268)
Q Consensus 155 d~~g~ 159 (268)
.++|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 98863
No 302
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.09 E-value=0.013 Score=44.53 Aligned_cols=106 Identities=17% Similarity=0.279 Sum_probs=72.6
Q ss_pred CCcEEEEec-CcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCChh---hHHHHHHHHCCCCccEE
Q 024411 79 HGECVFISA-ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEA---DLNAALKRYFPEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~g-a~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~---~~~~~~~~~~~~~~d~v 153 (268)
..+.|||+| +.||+|.++..-...-|+.|+++.|+-+....+..++|.. .-+|..+++ .+..+++....|+.|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 345677875 5688999999999999999999999988777665467763 334444432 34445555555689999
Q ss_pred EeCCChh----h---------------------HHhH--HHhhhcCCEEEEEcccccc
Q 024411 154 FENVGGK----L---------------------LDAV--LPNMKIRGRIAACGMISQY 184 (268)
Q Consensus 154 ~d~~g~~----~---------------------~~~~--~~~l~~~G~~v~~g~~~~~ 184 (268)
++.+|.. . ...+ -.+++..|++|.+|+..+.
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~ 143 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV 143 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE
Confidence 9977732 1 1111 1245678999999987654
No 303
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.09 E-value=0.0045 Score=49.36 Aligned_cols=98 Identities=15% Similarity=0.086 Sum_probs=61.1
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-Cee--eecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DEA--FNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~-~~v--~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
..+|||+||+|.+|..++..+...|++|+++.+++++..... ..+. ..+ .|..+. ...+.+....++|+++.+
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~~~Dl~d~---~~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL-PQDPSLQIVRADVTEG---SDKLVEAIGDDSDAVICA 92 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc-ccCCceEEEEeeCCCC---HHHHHHHhhcCCCEEEEC
Confidence 578999999999999999988888999999998877654332 1111 122 233321 122322222258999988
Q ss_pred CChh--------------hHHhHHHhhhc--CCEEEEEccc
Q 024411 157 VGGK--------------LLDAVLPNMKI--RGRIAACGMI 181 (268)
Q Consensus 157 ~g~~--------------~~~~~~~~l~~--~G~~v~~g~~ 181 (268)
.|.. .....++.+.. .++++.++..
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 7641 12334444443 2578887664
No 304
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.08 E-value=0.0055 Score=52.27 Aligned_cols=75 Identities=29% Similarity=0.391 Sum_probs=50.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-ee--eecCChhhHHHHHHHHCCCCccEEEe
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EA--FNYKEEADLNAALKRYFPEGIDIYFE 155 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~~~~~~~~d~v~d 155 (268)
.+++++|+||+|++|.+++..+...|++|+++++++++.+...+..+.. .. .|..+. + .+.+.. +++|+++.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-~---~v~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-A---ALAELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-H---HHHHHh-CCCCEEEE
Confidence 4689999999999999999999899999999998876554322121111 12 233332 1 222222 36999998
Q ss_pred CCC
Q 024411 156 NVG 158 (268)
Q Consensus 156 ~~g 158 (268)
++|
T Consensus 252 nAG 254 (406)
T PRK07424 252 NHG 254 (406)
T ss_pred CCC
Confidence 876
No 305
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.08 E-value=0.0065 Score=48.83 Aligned_cols=80 Identities=14% Similarity=0.236 Sum_probs=51.2
Q ss_pred CCcEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eeecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g--~~G~~~i~l~~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
.+++++|+||++ ++|.++++.+...|++|+++.+++. ..+.+.++.+... ..|..+.++....+.+.. .+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 468999999975 8999999999999999998887632 2222321222222 234444324444443332 246
Q ss_pred ccEEEeCCC
Q 024411 150 IDIYFENVG 158 (268)
Q Consensus 150 ~d~v~d~~g 158 (268)
+|++++++|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 999999987
No 306
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0053 Score=49.19 Aligned_cols=80 Identities=23% Similarity=0.279 Sum_probs=51.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCCC-e--eeecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN--KFGFD-E--AFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~--~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
++.+++|+|++|++|..++..+...|++|+++.++++..+...+ ..+.. . ..|..+.++....+.+.. .+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46789999999999999999999999999999988653333321 22222 1 223333213333333221 23689
Q ss_pred EEEeCCC
Q 024411 152 IYFENVG 158 (268)
Q Consensus 152 ~v~d~~g 158 (268)
+++.++|
T Consensus 85 ~vi~~ag 91 (263)
T PRK08226 85 ILVNNAG 91 (263)
T ss_pred EEEECCC
Confidence 9999887
No 307
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.08 E-value=0.0088 Score=51.44 Aligned_cols=74 Identities=22% Similarity=0.372 Sum_probs=54.4
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEE
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYF 154 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~ 154 (268)
...++++++|+|+ |.+|..+++.++..| .+|+++.++.++...+.++++.. .++.. ++.+.+. ++|+|+
T Consensus 176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~---~l~~~l~-----~aDvVi 245 (417)
T TIGR01035 176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE---DLEEYLA-----EADIVI 245 (417)
T ss_pred CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH---HHHHHHh-----hCCEEE
Confidence 3457789999997 999999999999999 58999999988765443367653 33221 3333332 499999
Q ss_pred eCCCh
Q 024411 155 ENVGG 159 (268)
Q Consensus 155 d~~g~ 159 (268)
+|++.
T Consensus 246 ~aT~s 250 (417)
T TIGR01035 246 SSTGA 250 (417)
T ss_pred ECCCC
Confidence 99986
No 308
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.07 E-value=0.018 Score=45.68 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=62.5
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHH----HHHHhcCCC-e--eeecCChhhHHHHHHHHCC--CC
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVD----LLKNKFGFD-E--AFNYKEEADLNAALKRYFP--EG 149 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~-~~~~~----~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~ 149 (268)
+.++||+||+|++|..+++-+...|++|+.+.++ .++.. .++ ..+.. . ..|....++....+.+... +.
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999888999998877643 23222 222 23322 1 1244333133222332211 36
Q ss_pred ccEEEeCCCh-h-------------------------hHHhHHHhhhcCCEEEEEccccc
Q 024411 150 IDIYFENVGG-K-------------------------LLDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 150 ~d~v~d~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
+|.++.++|. . ..+.+.+.++..|+++.++...+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 8999998873 0 02234445566789999887554
No 309
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.07 E-value=0.0055 Score=49.08 Aligned_cols=103 Identities=21% Similarity=0.263 Sum_probs=74.1
Q ss_pred HHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-e--ee--ecCChh
Q 024411 65 MTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD-E--AF--NYKEEA 136 (268)
Q Consensus 65 ~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~--v~--~~~~~~ 136 (268)
..++..+....++++|.++|=+|+ |-|.+++.+|+.+|++|+.++-|++..+.+++ +.|.. . +. |+++
T Consensus 58 ~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd-- 133 (283)
T COG2230 58 RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD-- 133 (283)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc--
Confidence 345555667788999999999996 56899999999999999999999998777763 34443 1 11 2221
Q ss_pred hHHHHHHHHCCCCccEEE-----eCCCh----hhHHhHHHhhhcCCEEEEEcc
Q 024411 137 DLNAALKRYFPEGIDIYF-----ENVGG----KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 137 ~~~~~~~~~~~~~~d~v~-----d~~g~----~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+ .+.||-|+ +.+|. ..+..+.+.|+|+|++++...
T Consensus 134 -~--------~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I 177 (283)
T COG2230 134 -F--------EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSI 177 (283)
T ss_pred -c--------ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEe
Confidence 1 12477664 45664 356788899999999877654
No 310
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0031 Score=49.55 Aligned_cols=76 Identities=24% Similarity=0.193 Sum_probs=51.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENV 157 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~ 157 (268)
.+++++|+||+|++|..+++.+...|++|+++.++..+ . ........|..+.+.....+.+.... ++|+++.++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 35789999999999999999999999999999987654 1 11111223444432343434433322 689999988
Q ss_pred Ch
Q 024411 158 GG 159 (268)
Q Consensus 158 g~ 159 (268)
|.
T Consensus 77 g~ 78 (234)
T PRK07577 77 GI 78 (234)
T ss_pred CC
Confidence 73
No 311
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.06 E-value=0.0042 Score=49.78 Aligned_cols=80 Identities=14% Similarity=0.257 Sum_probs=51.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHh----cCCC-e--eeecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNK----FGFD-E--AFNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~-~~~~~~~~~~~----~g~~-~--v~~~~~~~~~~~~~~~~~--~~ 148 (268)
+++++||+||++++|..++..+...|++|+.+.+ ++++.+...++ .+.. . ..|..+.++....+.+.. .+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999988864 44443332212 2321 1 234444323333333322 23
Q ss_pred CccEEEeCCC
Q 024411 149 GIDIYFENVG 158 (268)
Q Consensus 149 ~~d~v~d~~g 158 (268)
.+|++++++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999875
No 312
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.06 E-value=0.018 Score=43.06 Aligned_cols=98 Identities=22% Similarity=0.334 Sum_probs=65.2
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---hcCCCeeeecCChhhHHHHHHHHCCCCcc
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
++++++.++=.|+ +.|...++++.... .+||++.++++..+..++ ++|.+.+..... +..+.+.... .+|
T Consensus 31 ~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g--~Ap~~L~~~~--~~d 104 (187)
T COG2242 31 RPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG--DAPEALPDLP--SPD 104 (187)
T ss_pred CCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec--cchHhhcCCC--CCC
Confidence 6899998888886 45888889994433 399999999887766532 577664322222 2222222111 589
Q ss_pred EEEeCCC-h--hhHHhHHHhhhcCCEEEEEc
Q 024411 152 IYFENVG-G--KLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 152 ~v~d~~g-~--~~~~~~~~~l~~~G~~v~~g 179 (268)
.+|=-=| + ..++.++..|+++|++|.-.
T Consensus 105 aiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 105 AIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred EEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 8874333 2 46789999999999988753
No 313
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.05 E-value=0.0056 Score=48.83 Aligned_cols=80 Identities=20% Similarity=0.276 Sum_probs=51.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHhcCCC-e--eeecCChhhHHHHHHHHC--CCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~--~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
.+++++|+|++|++|.++++.+...|++|+.+.++.. ..+.+. +.+.. . ..|..+.++....+.+.. .+.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3679999999999999999999999999998865432 223333 33322 1 123333223333333321 13689
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
++++++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99998873
No 314
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.05 E-value=0.0042 Score=49.67 Aligned_cols=79 Identities=13% Similarity=0.109 Sum_probs=52.0
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCC--Cee--eecCChhhHHHHHHHHC--CCC
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK----FGF--DEA--FNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~----~g~--~~v--~~~~~~~~~~~~~~~~~--~~~ 149 (268)
++++||+|++|++|..++..+...|++|+.++++..+.+...++ .+. .+. .|..+.+.....+.+.. .++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999887655443212 221 122 23333313333333321 136
Q ss_pred ccEEEeCCC
Q 024411 150 IDIYFENVG 158 (268)
Q Consensus 150 ~d~v~d~~g 158 (268)
+|+++.++|
T Consensus 82 id~vv~~ag 90 (259)
T PRK12384 82 VDLLVYNAG 90 (259)
T ss_pred CCEEEECCC
Confidence 899999887
No 315
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.04 E-value=0.0043 Score=49.77 Aligned_cols=81 Identities=9% Similarity=0.144 Sum_probs=50.8
Q ss_pred CCcEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HhcCCCe--eeecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga--~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
+++.++|+|| ++++|.++++.+...|++|+++.+.+...+.++ ++.+... ..|..+.++....+.+.. .++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999996 579999999999999999998876543222222 1223222 234444323333333322 247
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|++++++|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999998863
No 316
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.03 E-value=0.005 Score=48.87 Aligned_cols=80 Identities=13% Similarity=0.189 Sum_probs=53.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-ee--eecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-EA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
++.++||+||+|++|..+++.+...|++|++++++.++.+.+.+. .+.. .. .|..+.+...+.+.... .+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 367899999999999999999999999999999888765544322 2221 12 23333213333333222 1368
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|+++.++|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999887
No 317
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.02 E-value=0.013 Score=48.47 Aligned_cols=100 Identities=19% Similarity=0.256 Sum_probs=68.3
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCeeeecCChhhHHHHHHHHCC
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFP 147 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~ 147 (268)
+...++++++||..|+ | .|..++.+++..+. .|++++.+++..+.+++ +.|.+.+..... +....... .
T Consensus 74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~--~ 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPE--F 147 (322)
T ss_pred HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhcccc--c
Confidence 3346788999999996 4 69999999998764 79999999887766653 345544332222 22221111 1
Q ss_pred CCccEEEeCCCh-hhHHhHHHhhhcCCEEEEE
Q 024411 148 EGIDIYFENVGG-KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 148 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 178 (268)
+.+|+|+.+.+. .......+.|+++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 269999988775 3445678899999997763
No 318
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.018 Score=46.64 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=62.9
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC-CCCccE
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF-PEGIDI 152 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~-~~~~d~ 152 (268)
++.++|+|+ |++|..++..+. .|++|+++++++++.+.+.+++ +.. . ..|..+.+.....+.+.. .+.+|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357899998 799999998885 7999999999877655443232 321 1 234444323333333321 247999
Q ss_pred EEeCCCh-h---h---------------HHhHHHhhhcCCEEEEEcccc
Q 024411 153 YFENVGG-K---L---------------LDAVLPNMKIRGRIAACGMIS 182 (268)
Q Consensus 153 v~d~~g~-~---~---------------~~~~~~~l~~~G~~v~~g~~~ 182 (268)
+++++|. . . ++...+.+..+|+++.+++..
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 9999873 1 1 233444555667777766544
No 319
>PRK06398 aldose dehydrogenase; Validated
Probab=97.01 E-value=0.0017 Score=52.06 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=49.9
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHC--CCCccEEEeC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF--PEGIDIYFEN 156 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~--~~~~d~v~d~ 156 (268)
.++++||+|+++++|..++..+...|++|+++.+++.+...+. ....|..+.++..+.+.+.. .+.+|+++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4679999999999999999999999999999987754321110 01224444323333333322 2368999998
Q ss_pred CC
Q 024411 157 VG 158 (268)
Q Consensus 157 ~g 158 (268)
+|
T Consensus 80 Ag 81 (258)
T PRK06398 80 AG 81 (258)
T ss_pred CC
Confidence 87
No 320
>PRK04148 hypothetical protein; Provisional
Probab=97.01 E-value=0.0096 Score=42.17 Aligned_cols=85 Identities=18% Similarity=0.133 Sum_probs=55.2
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENV 157 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 157 (268)
.++.++++.|. | .|...+..+...|.+|++++.++...+.++ +.+...+.+.- |...+.-. +++|+++.+-
T Consensus 15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDl----f~p~~~~y--~~a~liysir 85 (134)
T PRK04148 15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDL----FNPNLEIY--KNAKLIYSIR 85 (134)
T ss_pred ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcC----CCCCHHHH--hcCCEEEEeC
Confidence 35678999997 6 787667677788999999999999888887 66664332111 11111111 2588888877
Q ss_pred Ch-hhHHhHHHhhhc
Q 024411 158 GG-KLLDAVLPNMKI 171 (268)
Q Consensus 158 g~-~~~~~~~~~l~~ 171 (268)
.. +....++++.+.
T Consensus 86 pp~el~~~~~~la~~ 100 (134)
T PRK04148 86 PPRDLQPFILELAKK 100 (134)
T ss_pred CCHHHHHHHHHHHHH
Confidence 76 444445555444
No 321
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0085 Score=48.43 Aligned_cols=80 Identities=15% Similarity=0.162 Sum_probs=52.4
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-e--eecCChhhHHHHHHHHC--CCCcc
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE-A--FNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
..+++|+||+|++|..+++.+...|++|++++++.++.+.+.+ ..+... . .|..+.+.+...+.+.. -+++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999987765543321 223221 1 24443323333333321 13689
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
+++.++|.
T Consensus 90 ~vi~~Ag~ 97 (274)
T PRK07775 90 VLVSGAGD 97 (274)
T ss_pred EEEECCCc
Confidence 99998874
No 322
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.99 E-value=0.0064 Score=48.22 Aligned_cols=44 Identities=11% Similarity=0.200 Sum_probs=38.0
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~ 120 (268)
..++.+++|+|++|++|..+++.+...|++|++++++.++.+.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~ 52 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAV 52 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Confidence 45788999999999999999999988999999999988765443
No 323
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.97 E-value=0.0051 Score=48.94 Aligned_cols=78 Identities=15% Similarity=0.201 Sum_probs=52.0
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCccE
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGIDI 152 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~ 152 (268)
.++||+|++|++|..++..+...|++|+++++++++.+.+.+.+ +.. . ..|..+.+++...+.+.. .++.|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 57999999999999999999999999999999887766554222 221 1 124444323333332221 135899
Q ss_pred EEeCCC
Q 024411 153 YFENVG 158 (268)
Q Consensus 153 v~d~~g 158 (268)
++.+.+
T Consensus 82 vi~~a~ 87 (255)
T TIGR01963 82 LVNNAG 87 (255)
T ss_pred EEECCC
Confidence 988775
No 324
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0027 Score=50.79 Aligned_cols=76 Identities=20% Similarity=0.253 Sum_probs=49.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCChhhHHHHHHHHC--CCCccEEEe
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDIYFE 155 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~--~~~~d~v~d 155 (268)
+++++||+|++|++|..+++.+...|++|+++++++++. .. -... ...|..+.+.....+.+.. .+.+|++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999999999999999999999999999999875431 11 1111 1234444312332222221 236899999
Q ss_pred CCC
Q 024411 156 NVG 158 (268)
Q Consensus 156 ~~g 158 (268)
++|
T Consensus 84 ~ag 86 (260)
T PRK06523 84 VLG 86 (260)
T ss_pred CCc
Confidence 887
No 325
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.97 E-value=0.0038 Score=46.18 Aligned_cols=79 Identities=19% Similarity=0.269 Sum_probs=50.2
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHh---cCCC-ee--eecCChhhHHHHHHHHC--CCC
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS--KDKVDLLKNK---FGFD-EA--FNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~--~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~~~~--~~~ 149 (268)
++++|+||++++|..+++.+...|. +|+.+.++ .++.+.+.++ .+.. .+ .|..+.++....+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4789999999999999988888877 77777877 4444444223 3432 12 23333323444444332 237
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|+++.++|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998874
No 326
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0081 Score=49.44 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=32.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 113 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~ 113 (268)
.+++++|+||++++|.++++.+...|++|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 46899999999999999999999999999999876
No 327
>PRK12743 oxidoreductase; Provisional
Probab=96.96 E-value=0.0075 Score=48.18 Aligned_cols=80 Identities=14% Similarity=0.234 Sum_probs=50.3
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---hcCCC-ee--eecCChhhHHHHHHHHC--CCCc
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKN---KFGFD-EA--FNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~-~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
++++||+||++++|..+++.+...|++|+++.+ +.++.+.+.+ ..+.. +. .|..+.++....+.+.. .+.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999988864 3343333221 23432 22 34444323333333221 1368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|.++.++|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999998873
No 328
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0066 Score=48.91 Aligned_cols=78 Identities=18% Similarity=0.130 Sum_probs=50.9
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-ee--eecCChhhHHHHHHHHC--CCCccEE
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-EA--FNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
+++|+||+|++|..++..+...|++|++++++.++.+.+.+. .+.. .. .|..+.+++...+.... .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999999988999999999888765543312 2222 12 23333212333222221 1369999
Q ss_pred EeCCCh
Q 024411 154 FENVGG 159 (268)
Q Consensus 154 ~d~~g~ 159 (268)
+.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 998873
No 329
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.93 E-value=0.0061 Score=48.88 Aligned_cols=80 Identities=16% Similarity=0.284 Sum_probs=51.3
Q ss_pred CCcEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHhcCCCe--eeecCChhhHHHHHHHHCC--CC
Q 024411 79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGS---KDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EG 149 (268)
Q Consensus 79 ~~~~vlI~ga--~g~~G~~~i~l~~~~g~~V~~~~~~---~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~ 149 (268)
.+++++|+|| ++++|.++++.+...|++|+++.+. +++.+.+.++++... ..|..+.++....+.+... +.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4688999996 5799999999999999999987543 333333332444322 2344443244444433322 47
Q ss_pred ccEEEeCCC
Q 024411 150 IDIYFENVG 158 (268)
Q Consensus 150 ~d~v~d~~g 158 (268)
+|++++++|
T Consensus 85 iD~lvnnAG 93 (260)
T PRK06997 85 LDGLVHSIG 93 (260)
T ss_pred CcEEEEccc
Confidence 999999886
No 330
>PRK09135 pteridine reductase; Provisional
Probab=96.92 E-value=0.0078 Score=47.64 Aligned_cols=80 Identities=11% Similarity=0.116 Sum_probs=50.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCC-C---eeeecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKN---KFGF-D---EAFNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~-~~~~~~~~---~~g~-~---~v~~~~~~~~~~~~~~~~~--~~ 148 (268)
.+.++||+||+|++|..++..+...|++|++++++. ++.+.+.+ .... . ...|..+.+.....+.+.. -+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999988999999999753 33333221 1111 1 1234444323333333221 13
Q ss_pred CccEEEeCCC
Q 024411 149 GIDIYFENVG 158 (268)
Q Consensus 149 ~~d~v~d~~g 158 (268)
.+|+++.++|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 331
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.91 E-value=0.023 Score=46.65 Aligned_cols=36 Identities=14% Similarity=0.192 Sum_probs=31.3
Q ss_pred CCcEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024411 79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKD 115 (268)
Q Consensus 79 ~~~~vlI~ga--~g~~G~~~i~l~~~~g~~V~~~~~~~~ 115 (268)
.|+++||+|+ +.|+|.++++.+...|++|++ .+...
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~ 45 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVP 45 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcc
Confidence 5789999999 799999999999999999988 44433
No 332
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.90 E-value=0.0074 Score=48.34 Aligned_cols=105 Identities=13% Similarity=0.111 Sum_probs=64.3
Q ss_pred CCcEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCC------HHHHHHHHHhcCCCe--eeecCChhhHHHHHHHHC--
Q 024411 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGS------KDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYF-- 146 (268)
Q Consensus 79 ~~~~vlI~ga~--g~~G~~~i~l~~~~g~~V~~~~~~------~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~-- 146 (268)
.+++++|+||+ +++|.+++..+...|++|+++.++ ++..+.+.++.+... ..|..+.++..+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 46889999985 799999999999999999887543 222333331222111 234444323333333322
Q ss_pred CCCccEEEeCCChh-------h-----------------------HHhHHHhhhcCCEEEEEccccc
Q 024411 147 PEGIDIYFENVGGK-------L-----------------------LDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 147 ~~~~d~v~d~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
.+.+|++++++|.. . .+..++.++.+|+++.++...+
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~ 151 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG 151 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 14699999988731 0 2345556667799988876543
No 333
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.90 E-value=0.01 Score=48.10 Aligned_cols=94 Identities=15% Similarity=0.128 Sum_probs=60.5
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
..+.+++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.+.++....+.... +..+.+ ..+|++++|
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~--~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL--ELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc--cchhcc-----ccCCEEEEC
Confidence 35678999997 999999999999999 599999999988776653444211011100 111111 258999999
Q ss_pred CChhhH------HhHHHhhhcCCEEEEEc
Q 024411 157 VGGKLL------DAVLPNMKIRGRIAACG 179 (268)
Q Consensus 157 ~g~~~~------~~~~~~l~~~G~~v~~g 179 (268)
+..... ......+.++..++.+.
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 874211 12335566666666553
No 334
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.89 E-value=0.0099 Score=46.62 Aligned_cols=99 Identities=22% Similarity=0.275 Sum_probs=70.7
Q ss_pred cCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC---CeeeecCChhhHHHHHHHH-CCC-
Q 024411 75 CSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEADLNAALKRY-FPE- 148 (268)
Q Consensus 75 ~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~-~~~- 148 (268)
....+|++||=.+ +|+|-.+..+++..|- +|++++.|+..++.++++... .. +.+... +..++ .++
T Consensus 47 ~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~-----dAe~LPf~D~ 118 (238)
T COG2226 47 LGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG-----DAENLPFPDN 118 (238)
T ss_pred hCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe-----chhhCCCCCC
Confidence 4456899999887 5679999999998875 999999999999888854432 11 211111 12221 233
Q ss_pred CccEEEeCCCh-------hhHHhHHHhhhcCCEEEEEccc
Q 024411 149 GIDIYFENVGG-------KLLDAVLPNMKIRGRIAACGMI 181 (268)
Q Consensus 149 ~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~ 181 (268)
.||.+.-+.|- ..+.++.+.|+|+|+++.+...
T Consensus 119 sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~ 158 (238)
T COG2226 119 SFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFS 158 (238)
T ss_pred ccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence 78988766552 4789999999999999988763
No 335
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0088 Score=48.34 Aligned_cols=80 Identities=24% Similarity=0.325 Sum_probs=51.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-------HHH----HHHhcCCC-e--eeecCChhhHHHHHHH
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-------VDL----LKNKFGFD-E--AFNYKEEADLNAALKR 144 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~-------~~~----~~~~~g~~-~--v~~~~~~~~~~~~~~~ 144 (268)
.+.+++|+||+|++|..++..+...|++|++++++.+. .+. ++ ..+.. . ..|..+.+.....+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-AAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHH
Confidence 45789999999999999999999999999999986532 111 22 22332 1 2344443233333332
Q ss_pred HC--CCCccEEEeCCCh
Q 024411 145 YF--PEGIDIYFENVGG 159 (268)
Q Consensus 145 ~~--~~~~d~v~d~~g~ 159 (268)
.. .+.+|++++++|.
T Consensus 84 ~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 84 AVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHhCCCCEEEECCCC
Confidence 21 1369999998873
No 336
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.88 E-value=0.015 Score=49.57 Aligned_cols=91 Identities=15% Similarity=0.195 Sum_probs=57.4
Q ss_pred EEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhc-CCC---eeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 83 VFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKF-GFD---EAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~--~V~~~~~~~~~~~~~~~~~-g~~---~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
|+|+|+ |.+|..+++.+...+- +|++.+++.++.+.+.+++ +.. ..+|..+.++ +.+... +.|+|++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPES----LAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHH----HHHHHT-TSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHH----HHHHHh-cCCEEEEC
Confidence 789999 9999999999987764 8999999999988776332 221 2344443212 333322 37999999
Q ss_pred CChh-hHHhHHHhhhcCCEEEEEc
Q 024411 157 VGGK-LLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 157 ~g~~-~~~~~~~~l~~~G~~v~~g 179 (268)
+|.. ...-+..++..+-.++...
T Consensus 75 ~gp~~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp SSGGGHHHHHHHHHHHT-EEEESS
T ss_pred CccchhHHHHHHHHHhCCCeeccc
Confidence 9984 4445555666677888743
No 337
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.88 E-value=0.01 Score=47.47 Aligned_cols=80 Identities=9% Similarity=0.073 Sum_probs=52.0
Q ss_pred CCcEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHhcCCC--e--eeecCChhhHHHHHHHHC--C
Q 024411 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK---DKVDLLKNKFGFD--E--AFNYKEEADLNAALKRYF--P 147 (268)
Q Consensus 79 ~~~~vlI~ga~--g~~G~~~i~l~~~~g~~V~~~~~~~---~~~~~~~~~~g~~--~--v~~~~~~~~~~~~~~~~~--~ 147 (268)
.+++++|+||+ +++|.++++.+...|++|+++.++. ++.+.+.+++... . ..|..+.++....+.+.. -
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 46899999997 7999999999999999999987542 3444444344211 1 234444323333333322 2
Q ss_pred CCccEEEeCCC
Q 024411 148 EGIDIYFENVG 158 (268)
Q Consensus 148 ~~~d~v~d~~g 158 (268)
+.+|++++++|
T Consensus 86 g~ld~lv~nag 96 (257)
T PRK08594 86 GVIHGVAHCIA 96 (257)
T ss_pred CCccEEEECcc
Confidence 47999998876
No 338
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.88 E-value=0.021 Score=44.29 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=65.2
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cCCCe--eeecCChhhHHHHHHHH
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEADLNAALKRY 145 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~~~~~ 145 (268)
....++++++||-+|+ |.|..+..+++..+ .+|+.++.+++..+.+++. .+..+ ++..+.. ....
T Consensus 70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~----~~~~-- 141 (212)
T PRK13942 70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT----LGYE-- 141 (212)
T ss_pred HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc----cCCC--
Confidence 4456889999999995 55778888888765 5999999998887777643 34332 2222211 0010
Q ss_pred CCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEE
Q 024411 146 FPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 146 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 178 (268)
..+.||.|+-.... .......+.|+++|+++..
T Consensus 142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 11379998754443 5556788899999998775
No 339
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.88 E-value=0.019 Score=45.61 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=50.4
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcCCC-ee--eecCChhhHHHHHHH---HCCCCccE
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKFGFD-EA--FNYKEEADLNAALKR---YFPEGIDI 152 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~-~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~~---~~~~~~d~ 152 (268)
+.+++|+||+|++|..++..+...|++|+++.+ ++++.+.+.+.++.. .. .|..+.+++...+.+ ..+.++|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~ 84 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT 84 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 568999999999999999999999999988754 445444444244322 11 243333233333332 22224899
Q ss_pred EEeCCC
Q 024411 153 YFENVG 158 (268)
Q Consensus 153 v~d~~g 158 (268)
++.++|
T Consensus 85 li~~ag 90 (253)
T PRK08642 85 VVNNAL 90 (253)
T ss_pred EEECCC
Confidence 998875
No 340
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.87 E-value=0.0072 Score=47.78 Aligned_cols=80 Identities=24% Similarity=0.348 Sum_probs=51.3
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHhc---CCC-ee--eecCChhhHHHHHHHHCC--CCc
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYFP--EGI 150 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~-~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~~--~~~ 150 (268)
+.++||+||+|++|..++..+...|++|+++ .+++++.+.+.+.+ +.. .+ .|..+.+.+.+.+.+... +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999998888889999998 87776654443222 211 11 233333133332322211 369
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999988874
No 341
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.87 E-value=0.0079 Score=47.43 Aligned_cols=78 Identities=19% Similarity=0.288 Sum_probs=49.2
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhc---CCC---eeeecCChhhHHHHHHHHC--CCCcc
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~-~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
+++||+|++|++|..++..+...|++|+++.+ ++++.+...++. +.. ...|..+.+.+...+.+.. .+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 36899999999999999999999999999887 444333222122 211 1224443323333333321 23689
Q ss_pred EEEeCCC
Q 024411 152 IYFENVG 158 (268)
Q Consensus 152 ~v~d~~g 158 (268)
.++.++|
T Consensus 81 ~vi~~ag 87 (242)
T TIGR01829 81 VLVNNAG 87 (242)
T ss_pred EEEECCC
Confidence 9999987
No 342
>PRK08264 short chain dehydrogenase; Validated
Probab=96.86 E-value=0.0066 Score=47.83 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=51.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC-ee--eecCChhhHHHHHHHHCCCCccEEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD-EA--FNYKEEADLNAALKRYFPEGIDIYF 154 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~~~~~~~~d~v~ 154 (268)
.+.+++|+||+|++|..+++.+...|+ +|+++.+++++.+. .+.. .+ .|..+.+++.+.+... +.+|+++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEE
Confidence 457899999999999999999999999 99999988765442 2221 12 2444332333333221 2589999
Q ss_pred eCCCh
Q 024411 155 ENVGG 159 (268)
Q Consensus 155 d~~g~ 159 (268)
.++|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 88875
No 343
>PRK05599 hypothetical protein; Provisional
Probab=96.85 E-value=0.0074 Score=47.96 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=49.9
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC--ee--eecCChhhHHHHHHHHC--CCCccE
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD--EA--FNYKEEADLNAALKRYF--PEGIDI 152 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~v--~~~~~~~~~~~~~~~~~--~~~~d~ 152 (268)
+++|+||++++|..++..+. .|++|+++.+++++.+.+.+++ +.. .. .|..+.+.....+.+.. .+.+|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 58999999999999888776 5999999999888776553232 322 12 24443323333222221 246899
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
++.++|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9988773
No 344
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0085 Score=47.41 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=50.9
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-ee--eecCChhhHHHHHHHHCCCCccEE
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-EA--FNYKEEADLNAALKRYFPEGIDIY 153 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~~~~~~~~~~d~v 153 (268)
.+++|+||+|++|..+++.+...|++|+++++++++.+...+.+ +.. .. .|..+.++....+.+. ...+|.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSL-PALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHH-hhcCCEE
Confidence 47999999999999999999999999999999887665433121 111 12 2333321333333332 1247999
Q ss_pred EeCCCh
Q 024411 154 FENVGG 159 (268)
Q Consensus 154 ~d~~g~ 159 (268)
+.++|.
T Consensus 81 v~~ag~ 86 (243)
T PRK07102 81 LIAVGT 86 (243)
T ss_pred EECCcC
Confidence 987763
No 345
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.84 E-value=0.0068 Score=55.49 Aligned_cols=81 Identities=19% Similarity=0.288 Sum_probs=55.2
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eeecCChhhHHHHHHHHC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEEADLNAALKRYF--PE 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~--~~ 148 (268)
.++++||+||+|++|..+++.+...|++|++++++.++.+.+.+++ +... ..|..+.+.....+.+.. .+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999999999877665443232 2211 234444323333333322 24
Q ss_pred CccEEEeCCCh
Q 024411 149 GIDIYFENVGG 159 (268)
Q Consensus 149 ~~d~v~d~~g~ 159 (268)
++|++++++|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 79999999873
No 346
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.84 E-value=0.012 Score=46.46 Aligned_cols=81 Identities=21% Similarity=0.318 Sum_probs=50.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---hcCCC-eee--ecCChhhHHHHHHHHCC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKN---KFGFD-EAF--NYKEEADLNAALKRYFP--EG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~-~~~~~~---~~g~~-~v~--~~~~~~~~~~~~~~~~~--~~ 149 (268)
++.+++|+|++|++|..++..+...|++|+++.++..+ .+...+ ..+.. ..+ |..+.+.+.+.+.+... ++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45689999999999999999999999999887765542 222211 22222 122 44443233333333221 26
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|.++.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999988873
No 347
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.84 E-value=0.013 Score=43.91 Aligned_cols=80 Identities=15% Similarity=0.217 Sum_probs=54.3
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--Ce-ee--ecCChhhHHHHHHHHCC--CCccE
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DE-AF--NYKEEADLNAALKRYFP--EGIDI 152 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~--~~-v~--~~~~~~~~~~~~~~~~~--~~~d~ 152 (268)
++..+|+|+++++|.+..|.+...|++|.+.+...+..+..-+.++. ++ .| |..+..+....+++... |.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 45678999999999999999999999999998776654444336655 22 22 33333133332333322 37899
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
+++|+|-
T Consensus 94 lVncAGI 100 (256)
T KOG1200|consen 94 LVNCAGI 100 (256)
T ss_pred EEEcCcc
Confidence 9999984
No 348
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.84 E-value=0.01 Score=47.49 Aligned_cols=81 Identities=19% Similarity=0.167 Sum_probs=51.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCC-e--eeecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~-~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
++++++|+||+|++|..+++.+...|++|+++.++. +....+.+ ..+.. . ..|..+.+...+.+.... .+.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999998887743 23322221 22322 1 234444323333333321 136
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|+++.++|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 349
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.83 E-value=0.0079 Score=47.74 Aligned_cols=81 Identities=14% Similarity=0.213 Sum_probs=50.9
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---hcCCC-ee--eecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKN---KFGFD-EA--FNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~-~~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~--~~~ 149 (268)
++.+++|+||+|++|..++..+...|++|++. .++.++.+.+.+ +.+.. .. .|..+.++....+.+.. .+.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999998764 555554433321 23332 12 23333323333333321 136
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|+++.++|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 350
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.82 E-value=0.003 Score=50.77 Aligned_cols=76 Identities=14% Similarity=0.187 Sum_probs=50.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCChhhHHHHHHHHC--CCCccEEEe
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDIYFE 155 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~--~~~~d~v~d 155 (268)
.+.+++|+|++|++|..+++.+...|++|+++++++.+.+. .... ...|..+.+++...+.+.. .+.+|+++.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46789999999999999999999999999999877543321 1111 1234444323333333321 136899999
Q ss_pred CCC
Q 024411 156 NVG 158 (268)
Q Consensus 156 ~~g 158 (268)
++|
T Consensus 84 ~Ag 86 (266)
T PRK06171 84 NAG 86 (266)
T ss_pred CCc
Confidence 887
No 351
>PRK07069 short chain dehydrogenase; Validated
Probab=96.82 E-value=0.0091 Score=47.39 Aligned_cols=77 Identities=21% Similarity=0.289 Sum_probs=50.2
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhc----CCCe----eeecCChhhHHHHHHHHC--CCCcc
Q 024411 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKF----GFDE----AFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~-~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
++|+|++|++|..+++.+...|++|+++.++ .++.+.+.+++ +... ..|..+.+.+...+.+.. -+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999999899999999987 55544443232 1111 124444323433333322 13689
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
+++.++|.
T Consensus 82 ~vi~~ag~ 89 (251)
T PRK07069 82 VLVNNAGV 89 (251)
T ss_pred EEEECCCc
Confidence 99998873
No 352
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.82 E-value=0.024 Score=43.04 Aligned_cols=99 Identities=16% Similarity=0.156 Sum_probs=61.2
Q ss_pred hcCCCCCcEEEEecCcchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhHHHHHHHHCCC-C
Q 024411 74 VCSPKHGECVFISAASGAVGQLVGQFAKLL-G-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPE-G 149 (268)
Q Consensus 74 ~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~-g-~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~-~ 149 (268)
...++++++||.+|+ |. |..+..+++.. + .+|++++.++.. . ..+... ..|..+. .....+.+..++ +
T Consensus 27 ~~~i~~g~~VLDiG~-Gt-G~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~ 98 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-AP-GGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDK 98 (188)
T ss_pred hcccCCCCEEEEecC-CC-CHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCC
Confidence 345789999999996 44 44455555544 3 489999988643 1 223321 1233333 344455554544 8
Q ss_pred ccEEEe-CC----C-------------hhhHHhHHHhhhcCCEEEEEcc
Q 024411 150 IDIYFE-NV----G-------------GKLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 150 ~d~v~d-~~----g-------------~~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+|+|+. .. | ...+..+.+.|+|+|+++....
T Consensus 99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 999994 21 2 1356778899999999887543
No 353
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.80 E-value=0.0091 Score=47.50 Aligned_cols=79 Identities=11% Similarity=0.172 Sum_probs=51.6
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eeecCChhhHHHHHHHHC--CCCccE
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF--PEGIDI 152 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~ 152 (268)
++++|+|++|++|..+++.+...|++|+.+.+++++.+.+.++ .+.. . ..|..+.+...+.+.+.. .+.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3689999999999999999999999999999887655433212 2321 1 224444323333333321 136899
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
++.++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9998873
No 354
>PRK00811 spermidine synthase; Provisional
Probab=96.80 E-value=0.017 Score=46.95 Aligned_cols=97 Identities=11% Similarity=0.066 Sum_probs=62.4
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC-----C--CeeeecCChhhHHHHHHHHCCCC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFG-----F--DEAFNYKEEADLNAALKRYFPEG 149 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g-----~--~~v~~~~~~~~~~~~~~~~~~~~ 149 (268)
.+.++||++|+ |.|..+..++++.+. +|.++..+++-.+.+++.+. . +.-+..... +....++. ..+.
T Consensus 75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence 35678999995 447778888887665 89999999988888874332 1 111111111 33334443 3448
Q ss_pred ccEEEeCC-C----------hhhHHhHHHhhhcCCEEEEE
Q 024411 150 IDIYFENV-G----------GKLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 150 ~d~v~d~~-g----------~~~~~~~~~~l~~~G~~v~~ 178 (268)
+|+|+--. . .+.+..+.+.|+++|.++.-
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99887432 1 12357888999999998864
No 355
>PLN02366 spermidine synthase
Probab=96.78 E-value=0.018 Score=47.25 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=62.3
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC------CeeeecCChhhHHHHHHHHCCCCc
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEADLNAALKRYFPEGI 150 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~~~~~~~~ 150 (268)
.+.++||++|+ | -|..+..++++-+. +|.++..+++-.+.+++.+.. +.-+..... +....+++..++.+
T Consensus 90 ~~pkrVLiIGg-G-~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~y 166 (308)
T PLN02366 90 PNPKKVLVVGG-G-DGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTY 166 (308)
T ss_pred CCCCeEEEEcC-C-ccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCC
Confidence 45788999996 3 36677788887664 899999888877777733321 111111111 33344444323479
Q ss_pred cEEE-eCCC---------h-hhHHhHHHhhhcCCEEEEE
Q 024411 151 DIYF-ENVG---------G-KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 151 d~v~-d~~g---------~-~~~~~~~~~l~~~G~~v~~ 178 (268)
|+|+ |+.. . +.+..+.+.|+|+|.++.-
T Consensus 167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q 205 (308)
T PLN02366 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ 205 (308)
T ss_pred CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence 9886 4332 1 3477889999999998764
No 356
>PLN02476 O-methyltransferase
Probab=96.78 E-value=0.023 Score=45.71 Aligned_cols=104 Identities=15% Similarity=0.110 Sum_probs=68.9
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeeecCChhhHHHHHHHH--
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY-- 145 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~-- 145 (268)
...+..+.++||=+| .++|..++.+++.++ .+|+.+..+++..+.+++ +.|..+.+..... +..+.+.+.
T Consensus 112 ~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHh
Confidence 345667789999998 567888888888764 489999999988877763 3355432222222 333333332
Q ss_pred -C-CCCccEEE-eCCCh---hhHHhHHHhhhcCCEEEEEc
Q 024411 146 -F-PEGIDIYF-ENVGG---KLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 146 -~-~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~~g 179 (268)
. .+.||.+| |..-. ..++.++++|+++|.++.-.
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DN 228 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDN 228 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 1 23799886 54432 45788999999999887643
No 357
>PLN00015 protochlorophyllide reductase
Probab=96.78 E-value=0.011 Score=48.81 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=50.8
Q ss_pred EEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCC--Ce----eeecCChhhHHHHHHHHC--CCCccEEE
Q 024411 84 FISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGF--DE----AFNYKEEADLNAALKRYF--PEGIDIYF 154 (268)
Q Consensus 84 lI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~~~g~--~~----v~~~~~~~~~~~~~~~~~--~~~~d~v~ 154 (268)
+|+||++++|..+++.+...| ++|++++++.++.+.+.++++. .. ..|..+.+.....+.+.. .+.+|+++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999999888899 8999999988776655434432 11 234444323333333322 23689999
Q ss_pred eCCC
Q 024411 155 ENVG 158 (268)
Q Consensus 155 d~~g 158 (268)
+++|
T Consensus 81 nnAG 84 (308)
T PLN00015 81 CNAA 84 (308)
T ss_pred ECCC
Confidence 9887
No 358
>PRK05855 short chain dehydrogenase; Validated
Probab=96.77 E-value=0.0078 Score=54.05 Aligned_cols=81 Identities=17% Similarity=0.128 Sum_probs=55.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
.+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+. .|.. . ..|..+.+...+.+.+.. .+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 467899999999999999999999999999999988766554322 2332 1 234444323333333321 2368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|++++++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999874
No 359
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.77 E-value=0.011 Score=48.55 Aligned_cols=105 Identities=17% Similarity=0.259 Sum_probs=69.1
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----Cee----eecCChhhHHHHHHHHC--C
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----DEA----FNYKEEADLNAALKRYF--P 147 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~----~~v----~~~~~~~~~~~~~~~~~--~ 147 (268)
-.+.+++|+|+++|+|..++.-+...|++|+.++|+.++.+.+.++... ..+ .|.....+...+..+.. .
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 3567999999999999999999999999999999998776665544432 222 23333212333333322 2
Q ss_pred CCccEEEeCCChh------------------------hHHhHHHhhhcC--CEEEEEcccc
Q 024411 148 EGIDIYFENVGGK------------------------LLDAVLPNMKIR--GRIAACGMIS 182 (268)
Q Consensus 148 ~~~d~v~d~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~~ 182 (268)
...|+.++++|-- .....++.|+.. +|+|.+.+..
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 2789999888721 134455556643 7999887643
No 360
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.77 E-value=0.089 Score=46.13 Aligned_cols=173 Identities=13% Similarity=0.110 Sum_probs=93.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc----CCCe---ee-ecCChhhHHHHHHHHCCC-
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKF----GFDE---AF-NYKEEADLNAALKRYFPE- 148 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~----g~~~---v~-~~~~~~~~~~~~~~~~~~- 148 (268)
.|++|||+||+|++|...+.-....+. +++...+++-++.....++ +... .+ |.++. +.+.+...+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~----~~~~~~~~~~ 324 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDR----DRVERAMEGH 324 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccH----HHHHHHHhcC
Confidence 589999999999999776554444466 8888888777665544333 3221 11 33322 234444445
Q ss_pred CccEEEeCCChhh------------------HHhHHHhhhcCC--EEEEEcccccc-cCCCCccccchHHH----Hhc--
Q 024411 149 GIDIYFENVGGKL------------------LDAVLPNMKIRG--RIAACGMISQY-NLDKPEGVHNLMYL----VSK-- 201 (268)
Q Consensus 149 ~~d~v~d~~g~~~------------------~~~~~~~l~~~G--~~v~~g~~~~~-~~~~~~~~~~~~~~----~~~-- 201 (268)
++|+||.++.-++ ..+..+.....| ++|.+...--. +.+.....+...+. ..+
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmGaTKr~aE~~~~a~~~~~ 404 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMGATKRLAEKLFQAANRNV 404 (588)
T ss_pred CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhhHHHHHHHHHHHHHhhcc
Confidence 7999998775321 223333333444 56666431100 01111111111111 112
Q ss_pred ---ceeeeeEEecccccchHHHHHHHHHHHHcCCceeeeehhc--ccccHHHHHHHHHc
Q 024411 202 ---RLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAE--GLESAPAALIGLFS 255 (268)
Q Consensus 202 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~--~~~~~~~a~~~~~~ 255 (268)
+-++...+.++............-+++++|.--+..+..+ -|=-++||.+..-+
T Consensus 405 ~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlq 463 (588)
T COG1086 405 SGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQ 463 (588)
T ss_pred CCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHH
Confidence 2446666777775556677888888999984433322222 25567777776543
No 361
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.011 Score=46.15 Aligned_cols=76 Identities=16% Similarity=0.263 Sum_probs=49.9
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeee--ecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF--NYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
.++||+||+|++|..++..+... .+|+++.++.++.+.+.+.....+++ |..+.+.+.+.+... +++|.++.++|
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag 80 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNAG 80 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 57999999999999988877766 99999999887765554222212222 333321233323221 26999999887
Q ss_pred h
Q 024411 159 G 159 (268)
Q Consensus 159 ~ 159 (268)
.
T Consensus 81 ~ 81 (227)
T PRK08219 81 V 81 (227)
T ss_pred c
Confidence 4
No 362
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.75 E-value=0.0089 Score=47.34 Aligned_cols=81 Identities=22% Similarity=0.304 Sum_probs=49.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHH-HHHHH--hcCCCee---eecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKV-DLLKN--KFGFDEA---FNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~-~~~~~-~~~~~--~~g~~~v---~~~~~~~~~~~~~~~~~--~~~ 149 (268)
+++.++|+|++|++|..+++.+...|++|++..+ +..+. +.+.+ ..+.... .|..+.++..+.+.+.. .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999999999999888653 23222 22220 2333221 24443323333333221 137
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|+++.++|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 363
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.74 E-value=0.014 Score=45.85 Aligned_cols=70 Identities=23% Similarity=0.344 Sum_probs=50.1
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHhcCCCee-eecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~--~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
|+|+||+|.+|..+++.+...+.+|.+.+|+.. ..+.++ ..|+..+ .|+++.+.+.+.+ . ++|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~~~l~~al----~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDPESLVAAL----K-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-HHHHHHHH----T-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCHHHHHHHH----c-CCceEEeecC
Confidence 789999999999999999998899999998764 355566 6777533 3444332333333 2 5999998887
No 364
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.014 Score=53.45 Aligned_cols=79 Identities=22% Similarity=0.315 Sum_probs=54.4
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCCcc
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
+.+++|+||+|++|..++..+...|++|+++++++++.+.+.+++ +.. . ..|..+.+.....+.+.. .+.+|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 578999999999999999999899999999999988765543232 222 1 224444323333333321 23699
Q ss_pred EEEeCCC
Q 024411 152 IYFENVG 158 (268)
Q Consensus 152 ~v~d~~g 158 (268)
+++.++|
T Consensus 451 ~li~~Ag 457 (657)
T PRK07201 451 YLVNNAG 457 (657)
T ss_pred EEEECCC
Confidence 9999887
No 365
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.019 Score=45.83 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=50.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhc---CCC-e--eeecCChhhHHHHHHHHC--CCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~-~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~ 149 (268)
.+.++||+||+|++|..+++.+...|++|+++.+. .++.+.+.+++ +.. . ..|..+.+...+.+.+.. .+.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999999887653 33333322122 332 1 224444323333333221 236
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|+++.++|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 9999999873
No 366
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=96.70 E-value=0.0071 Score=46.52 Aligned_cols=105 Identities=16% Similarity=0.168 Sum_probs=69.2
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeeecCChhhHHHHHHHH--
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY-- 145 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~-- 145 (268)
.+.+..+.++||=+| .++|..++.++..+ +.+|+.+..+++..+.+++ +.|....+..... +..+.+.++
T Consensus 39 ~l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~ 115 (205)
T PF01596_consen 39 MLVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELAN 115 (205)
T ss_dssp HHHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHH
T ss_pred HHHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHh
Confidence 344556678999999 57799999999876 5699999999998888763 3354332222222 233333332
Q ss_pred -C-CCCccEEE-eCCCh---hhHHhHHHhhhcCCEEEEEcc
Q 024411 146 -F-PEGIDIYF-ENVGG---KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 146 -~-~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~~g~ 180 (268)
. .+.||+|| |+.-. ..+..++++|+++|.++.-..
T Consensus 116 ~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN~ 156 (205)
T PF01596_consen 116 DGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADNV 156 (205)
T ss_dssp TTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEETT
T ss_pred ccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEccc
Confidence 2 23799886 65433 457788899999998887643
No 367
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.70 E-value=0.012 Score=43.64 Aligned_cols=93 Identities=20% Similarity=0.246 Sum_probs=62.4
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeeecCChhhHHHHHHHHCCCCccEEEeCCCh
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEADLNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
.|.|+||+|-+|...++=|+..|.+|+++.|++++....+ ..-. ..+++.. .+.+.+ .++|+|+++.|.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~~---~~a~~l-----~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDLT---SLASDL-----AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccChh---hhHhhh-----cCCceEEEeccC
Confidence 4789999999999999999999999999999999876543 1111 1133222 222222 269999998874
Q ss_pred h----------hHHhHHHhhhcC--CEEEEEccccc
Q 024411 160 K----------LLDAVLPNMKIR--GRIAACGMISQ 183 (268)
Q Consensus 160 ~----------~~~~~~~~l~~~--G~~v~~g~~~~ 183 (268)
. .....+..|+.- -|+..+|..++
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 2 123355555552 37888887553
No 368
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.69 E-value=0.073 Score=43.00 Aligned_cols=95 Identities=14% Similarity=0.132 Sum_probs=60.1
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCChhhHHHHHHHHCCCCccEEEe
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDIYFE 155 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d 155 (268)
...+++++|+|+ |++|.+++..+...|++|+++.++.++.+.+.+.+... .+... .+.. .....+|++++
T Consensus 114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~----~~~~----~~~~~~DivIn 184 (270)
T TIGR00507 114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF----SMDE----LPLHRVDLIIN 184 (270)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe----chhh----hcccCccEEEE
Confidence 345788999998 89999999888888999999999988766554344321 11111 1111 11125899999
Q ss_pred CCChh---hH---HhHHHhhhcCCEEEEEcc
Q 024411 156 NVGGK---LL---DAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 156 ~~g~~---~~---~~~~~~l~~~G~~v~~g~ 180 (268)
|++.. .. ......++++..++.+..
T Consensus 185 atp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 185 ATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred CCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 98752 11 112345666666666643
No 369
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.68 E-value=0.0096 Score=49.97 Aligned_cols=77 Identities=19% Similarity=0.232 Sum_probs=49.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C-e--eeecCChhhHHHHHHHHCCCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEADLNAALKRYFPEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~~~~~~~~~~d~v 153 (268)
++.+|||+||+|.+|..+++.+...|.+|+++.+++.......+.++. . . ..|..+.+.+...+.+ .++|++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~v 79 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE---FKPEIV 79 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh---cCCCEE
Confidence 467899999999999999999999999999998766533222112221 1 1 1233332123222222 158999
Q ss_pred EeCCC
Q 024411 154 FENVG 158 (268)
Q Consensus 154 ~d~~g 158 (268)
+.+++
T Consensus 80 ih~A~ 84 (349)
T TIGR02622 80 FHLAA 84 (349)
T ss_pred EECCc
Confidence 99887
No 370
>PRK00536 speE spermidine synthase; Provisional
Probab=96.66 E-value=0.0075 Score=48.07 Aligned_cols=98 Identities=17% Similarity=0.037 Sum_probs=63.7
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-CeeeecCChhhHHHHHHHHCCCCccEEE-e
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEADLNAALKRYFPEGIDIYF-E 155 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~d~v~-d 155 (268)
.+.++|||+|| |=|.++-.++|+-. +|..+.-.++-.+..++-+.. ...++...- .+...+.+...+.+|+|+ |
T Consensus 71 ~~pk~VLIiGG--GDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIvD 146 (262)
T PRK00536 71 KELKEVLIVDG--FDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIICL 146 (262)
T ss_pred CCCCeEEEEcC--CchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEEc
Confidence 34588999994 45778889999865 999999888878877732321 011111111 111123333334799776 7
Q ss_pred CCCh-hhHHhHHHhhhcCCEEEEEc
Q 024411 156 NVGG-KLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 156 ~~g~-~~~~~~~~~l~~~G~~v~~g 179 (268)
+.-. +.++.+.++|+++|.++.-.
T Consensus 147 s~~~~~fy~~~~~~L~~~Gi~v~Qs 171 (262)
T PRK00536 147 QEPDIHKIDGLKRMLKEDGVFISVA 171 (262)
T ss_pred CCCChHHHHHHHHhcCCCcEEEECC
Confidence 5555 67789999999999988753
No 371
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.66 E-value=0.037 Score=41.16 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=60.0
Q ss_pred ccchHHHHHHHhhhhcCCCCCcEEEEecCcch-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhH
Q 024411 60 LGMPGMTAYVGFYEVCSPKHGECVFISAASGA-VGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL 138 (268)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~-~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 138 (268)
.|+....+...+.....--.+.+++|.|+ |. +|..++.+++..|++|+++.++.+ ++
T Consensus 24 ~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~l 81 (168)
T cd01080 24 IPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK---------------------NL 81 (168)
T ss_pred cCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------hH
Confidence 34444445555544433467899999998 65 699999999999999888886522 22
Q ss_pred HHHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcc
Q 024411 139 NAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 139 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 180 (268)
.+.+. .+|+|+.+++.+.+ -..+.++++-.++.++.
T Consensus 82 ~~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~viIDla~ 117 (168)
T cd01080 82 KEHTK-----QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGI 117 (168)
T ss_pred HHHHh-----hCCEEEEcCCCCce-ecHHHccCCeEEEEccC
Confidence 22333 27889988887432 22234555555666655
No 372
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.64 E-value=0.038 Score=40.36 Aligned_cols=94 Identities=21% Similarity=0.198 Sum_probs=60.6
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhHHHHHHHHCCCCccEEEe
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDIYFE 155 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d 155 (268)
.++.+++|+|+ |++|...++.+...| .+|++..++.++.+.+.++++... ..... +..+. -+++|+++.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhc-----cccCCEEEe
Confidence 45688999997 999999999988886 689999998887766553555421 01111 21111 135999999
Q ss_pred CCChhhH-----HhHHHhhhcCCEEEEEcc
Q 024411 156 NVGGKLL-----DAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 156 ~~g~~~~-----~~~~~~l~~~G~~v~~g~ 180 (268)
|++.... ......++++..++.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 9886332 222344566666666644
No 373
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.62 E-value=0.036 Score=44.78 Aligned_cols=93 Identities=17% Similarity=0.103 Sum_probs=64.8
Q ss_pred ccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHH
Q 024411 60 LGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN 139 (268)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 139 (268)
+||.....+..+....---.|++++|.|.+.-+|.-+..++...|++|++..+... ++.
T Consensus 138 ~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l~ 196 (286)
T PRK14175 138 VPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DMA 196 (286)
T ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hHH
Confidence 45555555555544332357899999999666999999999999999998885321 222
Q ss_pred HHHHHHCCCCccEEEeCCChhh-HHhHHHhhhcCCEEEEEcc
Q 024411 140 AALKRYFPEGIDIYFENVGGKL-LDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 140 ~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~ 180 (268)
+.++ .+|+++.++|.+. +.. +.++++..++.+|.
T Consensus 197 ~~~~-----~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi 231 (286)
T PRK14175 197 SYLK-----DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGN 231 (286)
T ss_pred HHHh-----hCCEEEECCCCCcccCH--HHcCCCcEEEEcCC
Confidence 2333 2899999999753 333 45788877788776
No 374
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.62 E-value=0.01 Score=50.64 Aligned_cols=82 Identities=18% Similarity=0.209 Sum_probs=53.4
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHhc-CCCe-eeecCChhhHHHHHHHHCCC
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD------LLKNKF-GFDE-AFNYKEEADLNAALKRYFPE 148 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~------~~~~~~-g~~~-v~~~~~~~~~~~~~~~~~~~ 148 (268)
...+.+|||+||+|.+|..++..+...|.+|++++++..+.+ ...+.. +... ..|..+.+.+...++.. +.
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~ 135 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-GD 135 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-CC
Confidence 456779999999999999999999999999999998765421 111011 2221 23444432344334332 11
Q ss_pred CccEEEeCCCh
Q 024411 149 GIDIYFENVGG 159 (268)
Q Consensus 149 ~~d~v~d~~g~ 159 (268)
++|+|++|++.
T Consensus 136 ~~D~Vi~~aa~ 146 (390)
T PLN02657 136 PVDVVVSCLAS 146 (390)
T ss_pred CCcEEEECCcc
Confidence 69999998863
No 375
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.62 E-value=0.035 Score=45.14 Aligned_cols=71 Identities=23% Similarity=0.140 Sum_probs=49.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC----CeeeecCChhhHHHHHHHHCCCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEADLNAALKRYFPEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~~~~~~d~v 153 (268)
.+.+++|+|+ |+.|.+++..+...|+ +|+++.++.++.+.+.+.++. ..+.... ++.+.+ ..+|++
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDiV 196 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADGL 196 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCEE
Confidence 4578999998 9999999999999998 899999998887766534422 1122111 221112 248999
Q ss_pred EeCCC
Q 024411 154 FENVG 158 (268)
Q Consensus 154 ~d~~g 158 (268)
++|+.
T Consensus 197 InaTp 201 (284)
T PRK12549 197 VHATP 201 (284)
T ss_pred EECCc
Confidence 99964
No 376
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.61 E-value=0.093 Score=34.83 Aligned_cols=86 Identities=20% Similarity=0.200 Sum_probs=57.9
Q ss_pred EEEEecCcchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCC
Q 024411 82 CVFISAASGAVGQLVGQFAKLLG---CYVVGS-AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENV 157 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g---~~V~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 157 (268)
+|.|+|+ |.+|.+++.-+...| .+|+.+ .+++++.+.+.++++...... +..+.+++ .|++|-|+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----advvilav 69 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-----DNEEAAQE-----ADVVILAV 69 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-----EHHHHHHH-----TSEEEE-S
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-----ChHHhhcc-----CCEEEEEE
Confidence 4667786 999999999999999 799955 899999888875776432221 22333433 79999999
Q ss_pred ChhhHHhHHHhh---hcCCEEEEE
Q 024411 158 GGKLLDAVLPNM---KIRGRIAAC 178 (268)
Q Consensus 158 g~~~~~~~~~~l---~~~G~~v~~ 178 (268)
-...+...++.+ .++..++.+
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 987666665555 344445443
No 377
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.60 E-value=0.021 Score=45.43 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=49.8
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHh---cCCC-e--eeecCChhhHHHHHHHHCC--CCcc
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYFP--EGID 151 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~-~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d 151 (268)
+.++|+|++|++|..++..+...|++|++++++.. ..+...+. .+.. . ..|..+.+++.+.+.+... +.+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999999999999999986543 22222112 2221 1 2344443233333333321 3689
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99998873
No 378
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.58 E-value=0.034 Score=44.81 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=49.5
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEe
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFE 155 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d 155 (268)
...+++++|+|+ ||.+.+++..++.+|+ +|+++.|++++.+.+.+.++.. +...+. ...+|++++
T Consensus 119 ~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~---~~~~dlvIN 184 (272)
T PRK12550 119 VPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG---GIEADILVN 184 (272)
T ss_pred CCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc---cccCCEEEE
Confidence 445568999997 9999999999999998 7999999998877766344311 111111 125899999
Q ss_pred CCC
Q 024411 156 NVG 158 (268)
Q Consensus 156 ~~g 158 (268)
|+.
T Consensus 185 aTp 187 (272)
T PRK12550 185 VTP 187 (272)
T ss_pred CCc
Confidence 876
No 379
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.58 E-value=0.023 Score=50.04 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=52.6
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
+.++++++|+|. |..|++++++++..|++|++.+..+.+.+.++ +.|... +... .....+. .+|+|+.+
T Consensus 9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~~-~~~~---~~~~~l~-----~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVAT-VSTS---DAVQQIA-----DYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCEE-EcCc---chHhHhh-----cCCEEEEC
Confidence 557889999997 99999999999999999999997766666666 666632 2211 1112222 37999998
Q ss_pred CCh
Q 024411 157 VGG 159 (268)
Q Consensus 157 ~g~ 159 (268)
.|-
T Consensus 78 pGi 80 (488)
T PRK03369 78 PGF 80 (488)
T ss_pred CCC
Confidence 874
No 380
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.57 E-value=0.013 Score=47.51 Aligned_cols=75 Identities=12% Similarity=-0.028 Sum_probs=51.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC-eeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
++.+++|+|+ |+.+.+++..+..+|+ +|+++.|+.++.+.+.+.++.. .+.... .. +.+.... ..+|+|++|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~-~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GD-SGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---ch-hhhhhcc-cCCCEEEEC
Confidence 5778999997 9999999999999998 8999999998877765455421 111111 00 1111111 258999999
Q ss_pred CCh
Q 024411 157 VGG 159 (268)
Q Consensus 157 ~g~ 159 (268)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 874
No 381
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.57 E-value=0.044 Score=44.52 Aligned_cols=46 Identities=17% Similarity=0.141 Sum_probs=38.2
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKF 124 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~ 124 (268)
..+++++|+|+ ||.+.+++..+...|+ +++++.|+.++.+.+.+.+
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 34678999998 9999999998888998 8999999988877765344
No 382
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=96.57 E-value=0.046 Score=43.32 Aligned_cols=105 Identities=12% Similarity=0.102 Sum_probs=70.0
Q ss_pred hhhhcCCCCCcEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeeecCChhhHHHHHHHH
Q 024411 71 FYEVCSPKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY 145 (268)
Q Consensus 71 l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~ 145 (268)
|....+..+.++||=+| ..+|..++.+++.+ +.+|+.+..+++..+.+++ +.|...-+..... +..+.+.++
T Consensus 71 L~~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l 147 (247)
T PLN02589 71 LNMLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQM 147 (247)
T ss_pred HHHHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHH
Confidence 33345566778899998 57898899999876 4599999998887777653 3354333333332 334444443
Q ss_pred C-----CCCccEEE-eCCCh---hhHHhHHHhhhcCCEEEEE
Q 024411 146 F-----PEGIDIYF-ENVGG---KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 146 ~-----~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~~ 178 (268)
. .+.||.+| |+--. ..++.+++++++||.++.-
T Consensus 148 ~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~D 189 (247)
T PLN02589 148 IEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYD 189 (247)
T ss_pred HhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEEc
Confidence 2 24799887 54432 4577889999999987753
No 383
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.56 E-value=0.021 Score=45.18 Aligned_cols=81 Identities=22% Similarity=0.280 Sum_probs=50.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHh---cCCC-ee--eecCChhhHHHHHHHHCC--CC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNK---FGFD-EA--FNYKEEADLNAALKRYFP--EG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~-~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~~~~~--~~ 149 (268)
++++++|+|++|++|..++..+...|++|+++.+ ++++.+...+. .+.. .. .|..+.+.+.+.+.+... +.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999988889999987654 34433322212 2322 11 233333233333333222 35
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|+++.++|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 384
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.56 E-value=0.014 Score=42.86 Aligned_cols=81 Identities=20% Similarity=0.251 Sum_probs=58.5
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHhcCCCeeeecCC---hhhHHHHHHHHCC--CCcc
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKNKFGFDEAFNYKE---EADLNAALKRYFP--EGID 151 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~-~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~--~~~d 151 (268)
.++-.-||+|+.+++|.++...+..+|+.|+..+-..++ .+.++ ++|...++...+ +.+....+...-. |..|
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 356667999999999999999999999999999876665 44555 898866654332 2144444443322 3689
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
..++|+|-
T Consensus 86 ~~vncagi 93 (260)
T KOG1199|consen 86 ALVNCAGI 93 (260)
T ss_pred eeeeccce
Confidence 99999985
No 385
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.56 E-value=0.022 Score=45.77 Aligned_cols=79 Identities=14% Similarity=0.105 Sum_probs=48.5
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhc----CCC-e--eeecCChhhHH---HH-HHHH--C
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKF----GFD-E--AFNYKEEADLN---AA-LKRY--F 146 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~-~~~~~~~~~~~----g~~-~--v~~~~~~~~~~---~~-~~~~--~ 146 (268)
..++|+||++++|..+++.+...|++|+++++. +++.+.+.+++ +.. . ..|..+.+... +. +... .
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 478999999999999999999999999988643 34443332233 111 1 22444321211 12 2221 1
Q ss_pred CCCccEEEeCCCh
Q 024411 147 PEGIDIYFENVGG 159 (268)
Q Consensus 147 ~~~~d~v~d~~g~ 159 (268)
.+++|+++.++|.
T Consensus 82 ~g~iD~lv~nAG~ 94 (267)
T TIGR02685 82 FGRCDVLVNNASA 94 (267)
T ss_pred cCCceEEEECCcc
Confidence 2369999998873
No 386
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.55 E-value=0.03 Score=43.23 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=64.1
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cCCC---eeeecCChhhHHHHHHH
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKR 144 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~~~~ 144 (268)
+...++++++||-.|+ |.|..+..+++..+ .+|+.++.+++..+.+++. .+.. .++..+ ..+.+..
T Consensus 66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d----~~~~~~~ 139 (205)
T PRK13944 66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD----GKRGLEK 139 (205)
T ss_pred HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC----cccCCcc
Confidence 4456788999999985 45878888887764 5999999998877666532 3332 122222 1111111
Q ss_pred HCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEE
Q 024411 145 YFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 145 ~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 178 (268)
.+.||.++-+... .......+.|+++|+++..
T Consensus 140 --~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 140 --HAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred --CCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 1379988865554 4446778899999998764
No 387
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.54 E-value=0.02 Score=45.47 Aligned_cols=75 Identities=17% Similarity=0.297 Sum_probs=50.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
+++++||+|++|++|..++..+...|++|+++.++. .. ..+.. . ..|..+.+...+.+.+.. .+.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467899999999999999999999999999999775 22 22221 1 223333323333333322 1368999
Q ss_pred EeCCCh
Q 024411 154 FENVGG 159 (268)
Q Consensus 154 ~d~~g~ 159 (268)
+.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998874
No 388
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.54 E-value=0.03 Score=45.02 Aligned_cols=102 Identities=17% Similarity=0.245 Sum_probs=66.3
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCC-CCcc
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP-EGID 151 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~-~~~d 151 (268)
....+.++.+||=+|+ | .|..+..+++..+++|++++.++...+.+++.......+..... ++. ....+ +.||
T Consensus 46 ~~l~l~~~~~VLDiGc-G-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~---~~~~~~~~FD 119 (263)
T PTZ00098 46 SDIELNENSKVLDIGS-G-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DIL---KKDFPENTFD 119 (263)
T ss_pred HhCCCCCCCEEEEEcC-C-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Ccc---cCCCCCCCeE
Confidence 4457889999999986 3 46667777777788999999999888888733332111111111 111 11112 3699
Q ss_pred EEEeC-----CC--h--hhHHhHHHhhhcCCEEEEEcc
Q 024411 152 IYFEN-----VG--G--KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 152 ~v~d~-----~g--~--~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+|+.. .+ . ..+..+.+.|+|+|+++....
T Consensus 120 ~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 120 MIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 98852 12 2 357888999999999987654
No 389
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.51 E-value=0.081 Score=36.77 Aligned_cols=97 Identities=21% Similarity=0.305 Sum_probs=64.4
Q ss_pred cCCCCCcEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---hcCCCe--eeecCChhhHHHHHHHHCCC
Q 024411 75 CSPKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNAALKRYFPE 148 (268)
Q Consensus 75 ~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~~~~ 148 (268)
..+.++++++-.|+ | .|..+..+++..+ .+|++++.++...+.+++ .++... .+..+. ...... ..+
T Consensus 15 ~~~~~~~~vldlG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~ 87 (124)
T TIGR02469 15 LRLRPGDVLWDIGA-G-SGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA----PEALED-SLP 87 (124)
T ss_pred cCCCCCCEEEEeCC-C-CCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc----cccChh-hcC
Confidence 35667889999996 4 4889999998875 599999999888777652 233332 222211 110111 123
Q ss_pred CccEEEeCCCh----hhHHhHHHhhhcCCEEEEE
Q 024411 149 GIDIYFENVGG----KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 149 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~ 178 (268)
.+|+++-..+. ..++.+.+.|+++|+++..
T Consensus 88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 88 EPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred CCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 69999865432 3678899999999998764
No 390
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.50 E-value=0.03 Score=46.48 Aligned_cols=76 Identities=14% Similarity=0.121 Sum_probs=48.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhcCCC--ee--eecCChhhHHHHHHHHCCCCccE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKFGFD--EA--FNYKEEADLNAALKRYFPEGIDI 152 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~~~~~~~~~~d~ 152 (268)
.+.++||+||+|.+|..+++.+...| .+|++.+++..+...+.+.+... .. .|..+.+.+.+.+ .++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~-----~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL-----RGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH-----hcCCE
Confidence 36789999999999999988887765 68998887765544333233221 12 2434331222222 24899
Q ss_pred EEeCCCh
Q 024411 153 YFENVGG 159 (268)
Q Consensus 153 v~d~~g~ 159 (268)
++.++|.
T Consensus 78 Vih~Ag~ 84 (324)
T TIGR03589 78 VVHAAAL 84 (324)
T ss_pred EEECccc
Confidence 9998873
No 391
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.50 E-value=0.065 Score=40.64 Aligned_cols=97 Identities=19% Similarity=0.190 Sum_probs=61.8
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHH---hcCCCeeeecCChhhHHHHHHHHCCCCcc
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~-~g~~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
.+.++.+||-.|+ |.|..++.+++. .+++|++++.+++..+.+++ +.+.+. +..... +..+ +.. .+.+|
T Consensus 42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD 114 (187)
T PRK00107 42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD 114 (187)
T ss_pred hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence 3556889999986 346666666654 45799999999887766652 344433 222221 2221 111 23799
Q ss_pred EEEeCC-Ch--hhHHhHHHhhhcCCEEEEEc
Q 024411 152 IYFENV-GG--KLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 152 ~v~d~~-g~--~~~~~~~~~l~~~G~~v~~g 179 (268)
+|+-.. +. ..+..+.+.|+|+|+++.+-
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 998543 32 46678899999999998773
No 392
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.49 E-value=0.025 Score=44.59 Aligned_cols=79 Identities=24% Similarity=0.330 Sum_probs=49.2
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---hcCCC-ee--eecCChhhHHHHHHHHCC--CCc
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKN---KFGFD-EA--FNYKEEADLNAALKRYFP--EGI 150 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~-~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~~--~~~ 150 (268)
..++||+||+|++|..++..+...|++|+++.++..+ .+.+.+ ..+.. .. .|..+.+++.+.+.+... +++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 85 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999998886665442 222211 22221 11 244333233333333211 368
Q ss_pred cEEEeCCC
Q 024411 151 DIYFENVG 158 (268)
Q Consensus 151 d~v~d~~g 158 (268)
|.++.++|
T Consensus 86 d~vi~~ag 93 (249)
T PRK12825 86 DILVNNAG 93 (249)
T ss_pred CEEEECCc
Confidence 99999887
No 393
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.49 E-value=0.033 Score=45.00 Aligned_cols=46 Identities=22% Similarity=0.339 Sum_probs=40.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFG 125 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g 125 (268)
++++++|.|| ||.+.+++.-++..|+ +++++.|+.++.+.+.+.++
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 5799999998 9999999999999997 89999999999887764554
No 394
>PRK01581 speE spermidine synthase; Validated
Probab=96.49 E-value=0.071 Score=44.54 Aligned_cols=97 Identities=12% Similarity=0.054 Sum_probs=61.8
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhc-C-------C--CeeeecCChhhHHHHHHHHC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKF-G-------F--DEAFNYKEEADLNAALKRYF 146 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~~~~~~~~~~-g-------~--~~v~~~~~~~~~~~~~~~~~ 146 (268)
.+.++||++|+ |.|..+..++++-+ .+|+++..+++-.+.++ ++ . . +.-+..... +..+.+.. .
T Consensus 149 ~~PkrVLIIGg--GdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-~ 223 (374)
T PRK01581 149 IDPKRVLILGG--GDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-P 223 (374)
T ss_pred CCCCEEEEECC--CHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-c
Confidence 44568999995 56777777887655 49999999998888888 42 1 1 111111111 33344443 3
Q ss_pred CCCccEEE-eCCCh-----------hhHHhHHHhhhcCCEEEEEc
Q 024411 147 PEGIDIYF-ENVGG-----------KLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 147 ~~~~d~v~-d~~g~-----------~~~~~~~~~l~~~G~~v~~g 179 (268)
.+.||+|+ |.... +.+..+.+.|+|+|.++.-.
T Consensus 224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 34799886 53221 24678899999999987753
No 395
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.48 E-value=0.013 Score=45.22 Aligned_cols=99 Identities=19% Similarity=0.245 Sum_probs=62.5
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCee-eecCChhhHHHHHHHHC
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEADLNAALKRYF 146 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~~~~ 146 (268)
+...++++++||-+|+ |.|..++-+++..|. +|+.+...++-.+.+++ .++...+ +...+ .. .-+.+
T Consensus 66 ~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd--g~-~g~~~-- 138 (209)
T PF01135_consen 66 EALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD--GS-EGWPE-- 138 (209)
T ss_dssp HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---GG-GTTGG--
T ss_pred HHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc--hh-hcccc--
Confidence 4456999999999994 568888888888775 79999988875555543 3455432 21211 11 11111
Q ss_pred CCCccEEEeCCChh-hHHhHHHhhhcCCEEEEE
Q 024411 147 PEGIDIYFENVGGK-LLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 147 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~ 178 (268)
.+.||.++-+.+-+ .-...++.|+++|++|..
T Consensus 139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 12799998777764 446788889999999875
No 396
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.47 E-value=0.028 Score=41.86 Aligned_cols=98 Identities=22% Similarity=0.253 Sum_probs=63.2
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeec----------C-------ChhhHHHHH
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY----------K-------EEADLNAAL 142 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~----------~-------~~~~~~~~~ 142 (268)
...|+|+|+ |.+|+.++.+++.+|++|++.+..+++.+... ..+...+... + .. .+...+
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~f 96 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPE-SYESNF 96 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCC-HHHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHH-HhHHHH
Confidence 367999997 99999999999999999999999988888777 6665432210 0 01 222233
Q ss_pred HHHCCCCccEEEeC-C--Ch--h--hHHhHHHhhhcCCEEEEEccc
Q 024411 143 KRYFPEGIDIYFEN-V--GG--K--LLDAVLPNMKIRGRIAACGMI 181 (268)
Q Consensus 143 ~~~~~~~~d~v~d~-~--g~--~--~~~~~~~~l~~~G~~v~~g~~ 181 (268)
.+... .+|+++.+ . +. + .....++.|+++..++.+...
T Consensus 97 ~~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D 141 (168)
T PF01262_consen 97 AEFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCD 141 (168)
T ss_dssp HHHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGG
T ss_pred HHHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEec
Confidence 22211 37888842 2 21 1 236788889988888888553
No 397
>PRK08309 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.24 Score=37.20 Aligned_cols=91 Identities=14% Similarity=0.112 Sum_probs=55.8
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---ee--eecCChhhHHHHHHHHC--CCCccEEE
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EA--FNYKEEADLNAALKRYF--PEGIDIYF 154 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~---~v--~~~~~~~~~~~~~~~~~--~~~~d~v~ 154 (268)
+++|+||+ ++|..+++.+...|++|++..+++++.+.+...++.. .. .|..+.+++...+.... .+.+|.++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 58999997 4555577777778999999999887766554233221 11 35555434555554432 23689998
Q ss_pred eCCChhhHHhHHHhhhcCC
Q 024411 155 ENVGGKLLDAVLPNMKIRG 173 (268)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G 173 (268)
+.+=...-......++..|
T Consensus 81 ~~vh~~~~~~~~~~~~~~g 99 (177)
T PRK08309 81 AWIHSSAKDALSVVCRELD 99 (177)
T ss_pred EeccccchhhHHHHHHHHc
Confidence 8766544444444444433
No 398
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.46 E-value=0.038 Score=45.06 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=30.9
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK 114 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~ 114 (268)
.+++++|+|+ ||+|.+++..+...|+ +|+++.++.
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 4678999998 8999999998889999 599999885
No 399
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.44 E-value=0.026 Score=44.59 Aligned_cols=79 Identities=14% Similarity=0.124 Sum_probs=50.6
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---hcCCC-e--eeecCChhhHHHHHHHHC--CCCcc
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~-~~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
+++||+||+|++|..++..+...|++|+++ .+++++.+...+ ..+.. . ..|..+.+.+.+.+.+.. .+++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 478999999999999999998999999875 455554433221 22321 1 234444324444444432 24799
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
.++.++|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999874
No 400
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.051 Score=41.50 Aligned_cols=63 Identities=19% Similarity=0.267 Sum_probs=41.9
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
+++|+|+++++|..++..+... .+|+.+.++.. ....|..+.+.....+.+. +++|+++.++|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~id~lv~~ag 64 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKV--GKVDAVVSAAG 64 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhc--CCCCEEEECCC
Confidence 6899999999999888877766 89999887642 0122333321333333332 36888888876
No 401
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.42 E-value=0.022 Score=41.97 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=41.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF 126 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~ 126 (268)
.|..|+++|+..|+|...++-+...|++|+++.|+++++..+. +.-.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV-~e~p 52 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV-KETP 52 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH-hhCC
Confidence 5778999999999999999999999999999999999988876 4433
No 402
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.026 Score=44.70 Aligned_cols=80 Identities=20% Similarity=0.207 Sum_probs=49.7
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---hcCCC-e--eeecCChhhHHHHHHHHC--CCCc
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~-~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 150 (268)
+.++||+|++|++|..+++.+...|++|+... +++++.+...+ ..+.. . ..|..+.+.+.+.+.+.. .+.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999988999887765 34443333221 22332 1 124443323444343322 1368
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|+++.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 403
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.41 E-value=0.063 Score=41.73 Aligned_cols=98 Identities=18% Similarity=0.215 Sum_probs=63.6
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCe--eeecCChhhHHHHHHHH
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNAALKRY 145 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~ 145 (268)
+...++++++||-.|+ |.|..+..+++..+. +|+.++.+++..+.+++ +.+.+. ++..+ ......
T Consensus 71 ~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d----~~~~~~-- 142 (215)
T TIGR00080 71 ELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD----GTQGWE-- 142 (215)
T ss_pred HHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC----cccCCc--
Confidence 3456889999999985 557778888887654 79999999887776653 234432 22221 111111
Q ss_pred CCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEE
Q 024411 146 FPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 146 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 178 (268)
..+.||+++-.... .......+.|+++|+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 11369988744333 4556778899999998764
No 404
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.40 E-value=0.017 Score=44.22 Aligned_cols=96 Identities=15% Similarity=0.031 Sum_probs=60.3
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCeeeecCChhhHHHHHHHHC-CCCcc
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYF-PEGID 151 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~-~~~~d 151 (268)
...++.+||-.|+ |.|..+..+++. |.+|++++.+++..+.+++.. +... ++.... ++. +.. .+.||
T Consensus 27 ~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~----~~~~~~~fD 97 (197)
T PRK11207 27 KVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLN----NLTFDGEYD 97 (197)
T ss_pred ccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-Chh----hCCcCCCcC
Confidence 3456678999986 457778888875 889999999998777665222 2221 111111 221 111 23699
Q ss_pred EEEeCCC-----h----hhHHhHHHhhhcCCEEEEEcc
Q 024411 152 IYFENVG-----G----KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 152 ~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+|+.+.. . ..+..+.+.|+|+|.++.+..
T Consensus 98 ~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~ 135 (197)
T PRK11207 98 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 135 (197)
T ss_pred EEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 9986532 1 346788889999999665543
No 405
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.39 E-value=0.018 Score=44.68 Aligned_cols=100 Identities=13% Similarity=0.111 Sum_probs=62.5
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeee------e---cCChhhHHHHHHHHC--
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF------N---YKEEADLNAALKRYF-- 146 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~------~---~~~~~~~~~~~~~~~-- 146 (268)
.++.++|+.|+ |.|.-++-+|. +|.+|++++.|+.-.+.+.++.+..... . ...-.-...++.+..
T Consensus 33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 56779999996 46888888875 7999999999999887754243332100 0 000000011111111
Q ss_pred -CCCccEEEeCCC---------hhhHHhHHHhhhcCCEEEEEcc
Q 024411 147 -PEGIDIYFENVG---------GKLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 147 -~~~~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~g~ 180 (268)
.+.||.++|+.. ...+..+.++|+|+|+++....
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 135899999653 1246789999999998776655
No 406
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.38 E-value=0.027 Score=46.40 Aligned_cols=81 Identities=19% Similarity=0.189 Sum_probs=50.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCCe---eeecCChhhHHHHHHHHC-CCCc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF-PEGI 150 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~-~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~-~~~~ 150 (268)
.+++++|+||++++|...++.+...|++|++.+++. .+.+.+.+ ..+... ..|..+.+.....+.... .+.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 467899999999999999999999999999987643 23322221 223221 123333212222222211 2479
Q ss_pred cEEEeCCCh
Q 024411 151 DIYFENVGG 159 (268)
Q Consensus 151 d~v~d~~g~ 159 (268)
|++++++|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999998873
No 407
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.37 E-value=0.055 Score=45.96 Aligned_cols=93 Identities=23% Similarity=0.328 Sum_probs=65.2
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
-.+.++||+|+ |-+|..++..+...|. +|++.-|+.++...+.+++|.. +...+ ++...+. .+|+||-+
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---el~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---ELLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---HHHHhhh-----hCCEEEEe
Confidence 36788999998 9999999999999996 8999999999877766588843 33332 3344443 39999999
Q ss_pred CChhh----HHhHHHhhhcCCE--EEEEcc
Q 024411 157 VGGKL----LDAVLPNMKIRGR--IAACGM 180 (268)
Q Consensus 157 ~g~~~----~~~~~~~l~~~G~--~v~~g~ 180 (268)
++.+. .....+.+++.-+ ++.++.
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence 88632 2344555555433 445544
No 408
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.36 E-value=0.028 Score=44.49 Aligned_cols=78 Identities=21% Similarity=0.161 Sum_probs=48.2
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---hcCCC-ee--eecCChhhHHHHHHHHC--CCCcc
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKN---KFGFD-EA--FNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~-~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
+++||+||+|++|..+++.+...|++|+++. +++++.+...+ ..+.. .. .|..+.++....+.+.. .+.+|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 5799999999999999999999999988765 44444333221 22322 11 23333213333333322 13689
Q ss_pred EEEeCCC
Q 024411 152 IYFENVG 158 (268)
Q Consensus 152 ~v~d~~g 158 (268)
+++.++|
T Consensus 83 ~li~~ag 89 (248)
T PRK06947 83 ALVNNAG 89 (248)
T ss_pred EEEECCc
Confidence 9998887
No 409
>PLN00016 RNA-binding protein; Provisional
Probab=96.34 E-value=0.038 Score=46.97 Aligned_cols=96 Identities=19% Similarity=0.216 Sum_probs=61.3
Q ss_pred CCcEEEEe----cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-----------HHHhcCCCeeeecCChhhHHHHHH
Q 024411 79 HGECVFIS----AASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL-----------LKNKFGFDEAFNYKEEADLNAALK 143 (268)
Q Consensus 79 ~~~~vlI~----ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~-----------~~~~~g~~~v~~~~~~~~~~~~~~ 143 (268)
...+|||+ ||+|.+|..++..+...|.+|+++++++..... +. ..+.. .+..+-. + +.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~-~v~~D~~-d----~~ 123 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVK-TVWGDPA-D----VK 123 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCce-EEEecHH-H----HH
Confidence 34679999 999999999999999999999999987654221 11 12322 2222211 2 32
Q ss_pred HHCCC-CccEEEeCCCh--hhHHhHHHhhhcCC--EEEEEccc
Q 024411 144 RYFPE-GIDIYFENVGG--KLLDAVLPNMKIRG--RIAACGMI 181 (268)
Q Consensus 144 ~~~~~-~~d~v~d~~g~--~~~~~~~~~l~~~G--~~v~~g~~ 181 (268)
..... ++|+|+++.+. ......++.++..| ++|.++..
T Consensus 124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 22223 79999999874 33445556665433 68877654
No 410
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.027 Score=44.95 Aligned_cols=81 Identities=17% Similarity=0.167 Sum_probs=49.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH---hcCCC-e--eeecCChhhHHHHHHHHC--
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS----KDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF-- 146 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~----~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~-- 146 (268)
.+.+++|+|++|++|..+++.+...|++|++++++ .++.+.+.+ ..+.. . ..|..+.++....+.+..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999997776532 222222211 22322 1 234444323333333322
Q ss_pred CCCccEEEeCCCh
Q 024411 147 PEGIDIYFENVGG 159 (268)
Q Consensus 147 ~~~~d~v~d~~g~ 159 (268)
.+.+|+++.++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 1368999998874
No 411
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.30 E-value=0.23 Score=37.98 Aligned_cols=101 Identities=18% Similarity=0.238 Sum_probs=62.6
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCe--eeecCChhhHHHHHHHHC
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNAALKRYF 146 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~~ 146 (268)
....+.++++||=.|+ |.|..++.+++.. +.+|++++.+++..+.+++ +++... ++.. +..+.+....
T Consensus 34 ~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~----d~~~~~~~~~ 107 (196)
T PRK07402 34 SQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG----SAPECLAQLA 107 (196)
T ss_pred HhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC----chHHHHhhCC
Confidence 4446778888888875 4566677777654 4699999999988777763 244432 2222 2222222221
Q ss_pred CCCcc-EEEeCCCh--hhHHhHHHhhhcCCEEEEEcc
Q 024411 147 PEGID-IYFENVGG--KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 147 ~~~~d-~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~ 180 (268)
..+| ++++.... ..+..+.+.|+|+|+++....
T Consensus 108 -~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 108 -PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred -CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 2234 44554332 567888999999999887743
No 412
>PLN03075 nicotianamine synthase; Provisional
Probab=96.28 E-value=0.037 Score=44.94 Aligned_cols=97 Identities=10% Similarity=0.027 Sum_probs=65.0
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCC----CeeeecCChhhHHHHHHHHCCCCccE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEADLNAALKRYFPEGIDI 152 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~--g~~V~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~~~~~~d~ 152 (268)
+.++|+-.|. |..|+.++-+++.+ +.+++.++.+++..+.+++.+.. ..-+.+... +..+.... .+.||+
T Consensus 123 ~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYDV 198 (296)
T ss_pred CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcCE
Confidence 7788999996 88888888888655 34899999999988888743322 222223222 22221101 137999
Q ss_pred EEeCC------Ch--hhHHhHHHhhhcCCEEEEEc
Q 024411 153 YFENV------GG--KLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 153 v~d~~------g~--~~~~~~~~~l~~~G~~v~~g 179 (268)
|+-.+ .. ..+....+.|+|||.++.-.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 98654 22 46789999999999877653
No 413
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.28 E-value=0.042 Score=42.35 Aligned_cols=91 Identities=18% Similarity=0.179 Sum_probs=59.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENV 157 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 157 (268)
.+.+|||.|| |.+|..-++.+...|++|++++.... ....+. +.+.-..+. . ++.... . .++++|+-++
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~-~---~~~~~d--l--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLA-R---CFDADI--L--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEe-C---CCCHHH--h--CCcEEEEECC
Confidence 4678999998 99999999999999999999875433 333333 333211221 1 111111 1 2589999999
Q ss_pred Chh-hHHhHHHhhhcCCEEEEEc
Q 024411 158 GGK-LLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 158 g~~-~~~~~~~~l~~~G~~v~~g 179 (268)
+.+ .-.......+..|..|...
T Consensus 78 ~d~~ln~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 78 DDEELNRRVAHAARARGVPVNVV 100 (205)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEC
Confidence 985 4445666666778777653
No 414
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.27 E-value=0.031 Score=43.80 Aligned_cols=101 Identities=16% Similarity=0.194 Sum_probs=71.3
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhc---CCCeeeecCChhhHHHHHHHHCC
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFP 147 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~--~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~ 147 (268)
..+++.+|++|+=.| .|.|.+++.++...|. +|+......+..+.+++.+ +....+..... ++.+...
T Consensus 88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-----Dv~~~~~ 160 (256)
T COG2519 88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-----DVREGID 160 (256)
T ss_pred HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-----ccccccc
Confidence 346789999998766 4558899999998876 9999998888877776433 44332222221 2222222
Q ss_pred C-CccEE-EeCCCh-hhHHhHHHhhhcCCEEEEEcc
Q 024411 148 E-GIDIY-FENVGG-KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 148 ~-~~d~v-~d~~g~-~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+ .+|.+ +|.-.. ..++.+.+.|+|+|+++.+..
T Consensus 161 ~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 161 EEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred ccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 2 68866 576666 889999999999999998854
No 415
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.024 Score=44.34 Aligned_cols=74 Identities=15% Similarity=0.215 Sum_probs=50.3
Q ss_pred EEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-ee--eecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 84 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--GFD-EA--FNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 84 lI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
||+||+|++|..+++.+...|++|+++++++++.+...+.+ +.. +. .|..+.+.+...+.+. +.+|.++.++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 58999999999999999999999999999877665544233 221 22 3444432333333332 36899999887
Q ss_pred h
Q 024411 159 G 159 (268)
Q Consensus 159 ~ 159 (268)
.
T Consensus 79 ~ 79 (230)
T PRK07041 79 D 79 (230)
T ss_pred C
Confidence 3
No 416
>PRK04457 spermidine synthase; Provisional
Probab=96.26 E-value=0.12 Score=41.60 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=64.0
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCC---eeeecCChhhHHHHHHHHCCCCccEE
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFPEGIDIY 153 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~-g~~V~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~~~~~d~v 153 (268)
.+.++||.+|+ |.|..+..+++.. +.+++++..+++-.+.+++.++.. .-+..... +..+.+.+ .++.+|+|
T Consensus 65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~-~~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAV-HRHSTDVI 140 (262)
T ss_pred CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHh-CCCCCCEE
Confidence 35678999996 3477888888776 459999999999999888555431 11111111 33444443 23479988
Q ss_pred E-eCCC----------hhhHHhHHHhhhcCCEEEEE
Q 024411 154 F-ENVG----------GKLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 154 ~-d~~g----------~~~~~~~~~~l~~~G~~v~~ 178 (268)
+ |... .+.+..+.+.|+|+|.++.-
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 6 4321 14577889999999998763
No 417
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.26 E-value=0.088 Score=41.51 Aligned_cols=106 Identities=16% Similarity=0.122 Sum_probs=67.9
Q ss_pred hhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cCCCeeeecCChhhHHHHHHHH
Q 024411 71 FYEVCSPKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRY 145 (268)
Q Consensus 71 l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~ 145 (268)
|....+..+.++||=.| .+.|..++.+++.++ .+|+.++.+++..+.+++. .|....+..... +..+.+.+.
T Consensus 60 L~~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l 136 (234)
T PLN02781 60 LSMLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQL 136 (234)
T ss_pred HHHHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHH
Confidence 33445677888999988 456777777777663 4999999999887777632 344322222222 333333332
Q ss_pred C----CCCccEEEeCCC----hhhHHhHHHhhhcCCEEEEEc
Q 024411 146 F----PEGIDIYFENVG----GKLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 146 ~----~~~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~g 179 (268)
. .+.||++|--.. ...+..+++++++||.++.-.
T Consensus 137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn 178 (234)
T PLN02781 137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN 178 (234)
T ss_pred HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 1 237998874332 246778899999999877643
No 418
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=96.25 E-value=0.072 Score=43.07 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=66.1
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCe------eeecCChhhHHHHHHHHCCCC
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDE------AFNYKEEADLNAALKRYFPEG 149 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~------v~~~~~~~~~~~~~~~~~~~~ 149 (268)
.++ ++|||+| ||-|..+=.++++... +++.+.-.++-.+.+++.++... .++.... +-.+.+++.. .+
T Consensus 75 ~~p-k~VLiiG--gGdG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~-Dg~~~v~~~~-~~ 149 (282)
T COG0421 75 PNP-KRVLIIG--GGDGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIID-DGVEFLRDCE-EK 149 (282)
T ss_pred CCC-CeEEEEC--CCccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEec-cHHHHHHhCC-Cc
Confidence 344 5999998 5667778888888765 99999988888888885554322 1111112 4444555432 27
Q ss_pred ccEEE-eCCCh----------hhHHhHHHhhhcCCEEEEE
Q 024411 150 IDIYF-ENVGG----------KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 150 ~d~v~-d~~g~----------~~~~~~~~~l~~~G~~v~~ 178 (268)
+|+|+ |+... +.++.+.++|+++|.++.-
T Consensus 150 fDvIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 150 FDVIIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred CCEEEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 99876 55432 3578999999999988876
No 419
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.24 E-value=0.02 Score=44.01 Aligned_cols=90 Identities=10% Similarity=0.013 Sum_probs=55.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCeeeecCChhhHHH-HHHHHCCCCccEEEeC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEADLNA-ALKRYFPEGIDIYFEN 156 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~d~v~d~ 156 (268)
.+.+|||.|| |.+|...+..+...|++|+++.+... ....+. ..+.. .+... .+.. .+ .++|+|+-+
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~i-~~~~~---~~~~~~l-----~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGKI-RWKQK---EFEPSDI-----VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCCE-EEEec---CCChhhc-----CCceEEEEc
Confidence 5678999998 99999999988889999998875432 222222 11211 11111 1111 11 258999999
Q ss_pred CChhhHHhHHHhhhcCCEEEEEc
Q 024411 157 VGGKLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g 179 (268)
++.+.++..+...+..+.++...
T Consensus 78 T~d~elN~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 78 TNDPRVNEQVKEDLPENALFNVI 100 (202)
T ss_pred CCCHHHHHHHHHHHHhCCcEEEC
Confidence 99876665555544555566553
No 420
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.036 Score=43.81 Aligned_cols=81 Identities=22% Similarity=0.228 Sum_probs=49.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHh---cCCC-ee--eecCChhhHHHHHHHHC--
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG----SKDKVDLLKNK---FGFD-EA--FNYKEEADLNAALKRYF-- 146 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~----~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~~~~-- 146 (268)
++.+++|+||+|++|..++..+...|++|+++.+ +.++.+.+.++ .+.. .. .|..+.+...+.+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999988654 23333322212 2222 11 23333313333333221
Q ss_pred CCCccEEEeCCCh
Q 024411 147 PEGIDIYFENVGG 159 (268)
Q Consensus 147 ~~~~d~v~d~~g~ 159 (268)
.+++|.++.++|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 1368999998874
No 421
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.042 Score=43.44 Aligned_cols=75 Identities=19% Similarity=0.185 Sum_probs=47.9
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eeecCChhhHHHHHHH----H-CC-CCccE
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKR----Y-FP-EGIDI 152 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~----~-~~-~~~d~ 152 (268)
++||+||+|++|..+++.+...|++|++++++.++. ... ..+... ..|..+.+++...+.+ . .. +..|.
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 689999999999999999988999999999875532 122 333221 2344443233332222 1 12 26788
Q ss_pred EEeCCC
Q 024411 153 YFENVG 158 (268)
Q Consensus 153 v~d~~g 158 (268)
++.++|
T Consensus 81 ~v~~ag 86 (243)
T PRK07023 81 LINNAG 86 (243)
T ss_pred EEEcCc
Confidence 888776
No 422
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.21 E-value=0.043 Score=43.81 Aligned_cols=40 Identities=25% Similarity=0.296 Sum_probs=32.5
Q ss_pred EEEEecCcchHHHHHHHHHHH----cCCEEEEEeCCHHHHHHHH
Q 024411 82 CVFISAASGAVGQLVGQFAKL----LGCYVVGSAGSKDKVDLLK 121 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~----~g~~V~~~~~~~~~~~~~~ 121 (268)
.++|+|+++++|..++..+.. .|++|+++.+++++.+.+.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~ 45 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLK 45 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHH
Confidence 589999999999887765543 7999999999888766554
No 423
>PLN02823 spermine synthase
Probab=96.21 E-value=0.088 Score=43.81 Aligned_cols=96 Identities=17% Similarity=0.240 Sum_probs=60.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC------eeeecCChhhHHHHHHHHCCCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD------EAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~------~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
+.++|||+|+ |-|..+..++++.+. +|.++..+++-.+.+++.++.. .-+..... +....+++ ..+.+|
T Consensus 103 ~pk~VLiiGg--G~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~-Da~~~L~~-~~~~yD 178 (336)
T PLN02823 103 NPKTVFIMGG--GEGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIIN-DARAELEK-RDEKFD 178 (336)
T ss_pred CCCEEEEECC--CchHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEC-hhHHHHhh-CCCCcc
Confidence 4568999995 446667778887655 8999999999888888544321 11111111 33344433 344899
Q ss_pred EEE-eCCC-----------h-hhHH-hHHHhhhcCCEEEEE
Q 024411 152 IYF-ENVG-----------G-KLLD-AVLPNMKIRGRIAAC 178 (268)
Q Consensus 152 ~v~-d~~g-----------~-~~~~-~~~~~l~~~G~~v~~ 178 (268)
+|+ |... . +.+. .+.+.|+++|.++.-
T Consensus 179 vIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q 219 (336)
T PLN02823 179 VIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ 219 (336)
T ss_pred EEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence 876 5322 1 2355 678899999987754
No 424
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.20 E-value=0.026 Score=45.87 Aligned_cols=95 Identities=8% Similarity=0.107 Sum_probs=60.1
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCChhhHHHHHHHHCC-CC-ccEEEeCCC
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFP-EG-IDIYFENVG 158 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~-~~-~d~v~d~~g 158 (268)
+|+|+||+|.+|..+++.+...|.+|.+++|++++.. ..+.. ...|+.+.+.+...++.... .+ +|.++-+.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~ 76 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP 76 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence 4899999999999999999999999999999876432 22332 13455554244444432111 25 898887766
Q ss_pred h-----hhHHhHHHhhhcCC--EEEEEcc
Q 024411 159 G-----KLLDAVLPNMKIRG--RIAACGM 180 (268)
Q Consensus 159 ~-----~~~~~~~~~l~~~G--~~v~~g~ 180 (268)
. ......++.++..| ++|.++.
T Consensus 77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 3 12334445554444 6777654
No 425
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.19 E-value=0.0085 Score=40.65 Aligned_cols=86 Identities=17% Similarity=0.295 Sum_probs=56.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
.+.+|||.|+ |.+|..-++.+...|++|++++... .... +.-.. ... .+...+ .++++|+-+.+
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~---~~~-~~~~~l-----~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQL---IRR-EFEEDL-----DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEE---EES-S-GGGC-----TTESEEEE-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHH---Hhh-hHHHHH-----hhheEEEecCC
Confidence 4688999998 9999999999999999999999765 2222 11111 111 331111 25999999999
Q ss_pred hhhH-HhHHHhhhcCCEEEEEcc
Q 024411 159 GKLL-DAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 159 ~~~~-~~~~~~l~~~G~~v~~g~ 180 (268)
.+.+ ....+..+..|.++....
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~D 92 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVVD 92 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEETT
T ss_pred CHHHHHHHHHHHhhCCEEEEECC
Confidence 8555 456666666898888755
No 426
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.19 E-value=0.19 Score=34.66 Aligned_cols=91 Identities=20% Similarity=0.131 Sum_probs=60.8
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCChh--
Q 024411 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGK-- 160 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-- 160 (268)
|+|.|. |.+|..+++.++..+.+|++++.++++.+.++ +.+.. ++..+. .-...+++..-..++.++-+.+..
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~gd~--~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIYGDA--TDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEES-T--TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-cccccc--hhhhHHhhcCccccCEEEEccCCHHH
Confidence 578887 99999999999997779999999999999988 66643 444433 223344444333788888777753
Q ss_pred h--HHhHHHhhhcCCEEEEE
Q 024411 161 L--LDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 161 ~--~~~~~~~l~~~G~~v~~ 178 (268)
. +....+.+.+..+++..
T Consensus 76 n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 2 22344445566666654
No 427
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=96.18 E-value=0.034 Score=43.58 Aligned_cols=74 Identities=16% Similarity=0.216 Sum_probs=51.2
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeeecCChhhHHHHHHHHCCCCccEEEeCCCh
Q 024411 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
|||+||+|-+|..++..+...|.+|+.+.++.........+.... ...|..+.+.+.+.+... .+|.|+.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence 799999999999999999999999998887776554443123322 233554432344444332 68999998874
No 428
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.17 E-value=0.068 Score=44.05 Aligned_cols=89 Identities=18% Similarity=0.290 Sum_probs=60.0
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~--~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
.+|.|+|+ |.+|...+..++..|. +|++.++++++.+.++ +.|....... +..+.+ ..+|+|+.|+.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~~----~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVTT----SAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceecC----CHHHHh-----cCCCEEEECCC
Confidence 57999996 9999999999888885 8999999998888887 6765321111 222222 24899999988
Q ss_pred hhhH----HhHHHhhhcCCEEEEEcc
Q 024411 159 GKLL----DAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 159 ~~~~----~~~~~~l~~~G~~v~~g~ 180 (268)
.... ......++++..++.++.
T Consensus 76 ~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 6432 333344556666666654
No 429
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.16 E-value=0.084 Score=43.87 Aligned_cols=93 Identities=18% Similarity=0.185 Sum_probs=61.0
Q ss_pred CCCcEEEEecCcchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEe
Q 024411 78 KHGECVFISAASGAVGQLVGQFAK-LLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFE 155 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~-~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d 155 (268)
-.+.+|+|+||+|.+|..+++.+. ..|. +++.+.++..+...+.++++...+. ++.+.+. .+|+|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~-----~aDiVv~ 221 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALP-----EADIVVW 221 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHc-----cCCEEEE
Confidence 467899999999999999888886 4565 8999998887777665344322111 2222221 4899999
Q ss_pred CCCh-hhHHhHHHhhhcCCEEEEEccc
Q 024411 156 NVGG-KLLDAVLPNMKIRGRIAACGMI 181 (268)
Q Consensus 156 ~~g~-~~~~~~~~~l~~~G~~v~~g~~ 181 (268)
+++. ..+..-...+++.-.++.++.+
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence 8886 4322222455666666777663
No 430
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.053 Score=43.04 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=34.0
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLK 121 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~-~~~~~~~ 121 (268)
++++|+||+|++|..+++.+...|++|+++++++ ++.+.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~ 43 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA 43 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence 4799999999999999999998999999999876 3444333
No 431
>PLN02686 cinnamoyl-CoA reductase
Probab=96.15 E-value=0.052 Score=45.95 Aligned_cols=45 Identities=11% Similarity=0.105 Sum_probs=37.4
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~ 121 (268)
...+++|||+||+|.+|..++..+...|++|+++.++.++.+.+.
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 356789999999999999999999999999998887766554443
No 432
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=96.12 E-value=0.052 Score=39.48 Aligned_cols=96 Identities=17% Similarity=0.182 Sum_probs=64.6
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCC-----hhhHHHHHHHHCCC-CccEE
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-----EADLNAALKRYFPE-GIDIY 153 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~-----~~~~~~~~~~~~~~-~~d~v 153 (268)
..+|+|.|+-|.+|.+.++..|.-++-|..++-++.+.. ....+++.++ ++...+++.+...+ ++|.|
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc------cceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 357999999999999999999999998888876544222 2223344333 11344455555666 99999
Q ss_pred EeCCCh-hh--------------------------HHhHHHhhhcCCEEEEEccc
Q 024411 154 FENVGG-KL--------------------------LDAVLPNMKIRGRIAACGMI 181 (268)
Q Consensus 154 ~d~~g~-~~--------------------------~~~~~~~l~~~G~~v~~g~~ 181 (268)
|..+|+ .. ...+..+|+++|-+-+.|..
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk 131 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK 131 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence 987764 10 22345578899988877753
No 433
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.12 E-value=0.038 Score=44.10 Aligned_cols=35 Identities=17% Similarity=0.100 Sum_probs=30.4
Q ss_pred CCcEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCC
Q 024411 79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGS 113 (268)
Q Consensus 79 ~~~~vlI~ga~g--~~G~~~i~l~~~~g~~V~~~~~~ 113 (268)
.++++||+||++ ++|..++..+...|++|++++++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 357899999984 89999998888889999999876
No 434
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=96.12 E-value=0.012 Score=46.65 Aligned_cols=66 Identities=17% Similarity=0.168 Sum_probs=46.5
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh
Q 024411 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
|+|+||+|-+|..+++.++..|..|++++|++.+.+... .. .+... + .+.+....++|+|++-+|.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~---~~-~v~~~----~---~~~~~~~~~~DavINLAG~ 66 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL---HP-NVTLW----E---GLADALTLGIDAVINLAGE 66 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc---Cc-ccccc----c---hhhhcccCCCCEEEECCCC
Confidence 689999999999999999999999999999877665432 21 11111 1 1222111269999999885
No 435
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.11 E-value=0.028 Score=46.57 Aligned_cols=38 Identities=16% Similarity=0.292 Sum_probs=33.2
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 116 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~ 116 (268)
.++++||+||+|.+|..++..+...|++|+++.++..+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~ 41 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKD 41 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcc
Confidence 46799999999999999999999999999888766553
No 436
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.10 E-value=0.11 Score=42.17 Aligned_cols=77 Identities=16% Similarity=0.150 Sum_probs=54.1
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
--.|++++|.|+++-+|..++.++...|++|++..+... ++.+.+ ..+|+++.+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---------------------~L~~~~-----~~aDIvI~A 209 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---------------------NLPELV-----KQADIIVGA 209 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---------------------hHHHHh-----ccCCEEEEc
Confidence 357889999998555999999999999998887764211 122122 148999999
Q ss_pred CChhhHHhHHHhhhcCCEEEEEcc
Q 024411 157 VGGKLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+|.+.+ --.+.++++..++.+|.
T Consensus 210 tG~~~~-v~~~~lk~gavViDvg~ 232 (283)
T PRK14192 210 VGKPEL-IKKDWIKQGAVVVDAGF 232 (283)
T ss_pred cCCCCc-CCHHHcCCCCEEEEEEE
Confidence 986432 22356888888888775
No 437
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.09 E-value=0.076 Score=39.05 Aligned_cols=88 Identities=10% Similarity=0.134 Sum_probs=55.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
.+.+|+|.|| |.+|..-++.+...|++|+++. ++..+.+. +++... ...+ .+.+. .-.++|+|+-+++
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~~~----dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFSND----DIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccChh----cCCCceEEEECCC
Confidence 5688999998 9999999999888999999884 34334444 443211 1111 12111 0126899999999
Q ss_pred hhhHHhHHHhhhcCCEEEEE
Q 024411 159 GKLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~ 178 (268)
.+.++......+..+.++..
T Consensus 80 d~e~N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 80 QHAVNMMVKQAAHDFQWVNV 99 (157)
T ss_pred CHHHHHHHHHHHHHCCcEEE
Confidence 87666555555444444443
No 438
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.09 E-value=0.051 Score=42.88 Aligned_cols=79 Identities=15% Similarity=0.176 Sum_probs=48.9
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcC---CC-ee--eecCChhhHHHHHHHHC--CCCcc
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFG---FD-EA--FNYKEEADLNAALKRYF--PEGID 151 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~-~~~~~~~~~g---~~-~v--~~~~~~~~~~~~~~~~~--~~~~d 151 (268)
++++|+|++|++|..+++.+...|++|+++++++. ......+.+. .. .. .|..+.+...+.+.+.. .+.+|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999888999999998743 1221211222 11 12 23333313333333221 13699
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
+++.++|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12824 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99998873
No 439
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.08 E-value=0.081 Score=44.47 Aligned_cols=76 Identities=20% Similarity=0.239 Sum_probs=49.5
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-eee--ecCChhhHHHHHHHHCCCCccE
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--GFD-EAF--NYKEEADLNAALKRYFPEGIDI 152 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~v~--~~~~~~~~~~~~~~~~~~~~d~ 152 (268)
..+.+|||+||+|.+|..+++.+...|.+|+++.++..+.+.+.+.+ +.. ..+ |..+. . .+.+... ++|+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~---~~~~~~~-~~d~ 82 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEE-G---SFDEAVK-GCDG 82 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCH-H---HHHHHHc-CCCE
Confidence 45678999999999999999999999999999988766544333122 111 122 22222 1 2222222 4899
Q ss_pred EEeCCC
Q 024411 153 YFENVG 158 (268)
Q Consensus 153 v~d~~g 158 (268)
|+.+++
T Consensus 83 Vih~A~ 88 (353)
T PLN02896 83 VFHVAA 88 (353)
T ss_pred EEECCc
Confidence 998876
No 440
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=96.08 E-value=0.087 Score=42.14 Aligned_cols=94 Identities=14% Similarity=0.166 Sum_probs=61.7
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC---eeeecCChhhHHHHHHHHCCCCcc
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
.++.+||-.|+ |.|..+..+++. |.+|++++.+++..+.+++.. |.. .++.. +.. .+.....+.+|
T Consensus 43 ~~~~~vLDiGc--G~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~----d~~-~l~~~~~~~fD 114 (255)
T PRK11036 43 PRPLRVLDAGG--GEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC----AAQ-DIAQHLETPVD 114 (255)
T ss_pred CCCCEEEEeCC--CchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc----CHH-HHhhhcCCCCC
Confidence 45678888885 567888888775 889999999999888776322 321 12221 121 12222234799
Q ss_pred EEEeCC-----Ch--hhHHhHHHhhhcCCEEEEEc
Q 024411 152 IYFENV-----GG--KLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 152 ~v~d~~-----g~--~~~~~~~~~l~~~G~~v~~g 179 (268)
+|+... .. ..+..+.+.|+|+|.++.+-
T Consensus 115 ~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 115 LILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred EEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 998532 22 45788999999999987653
No 441
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.08 E-value=0.032 Score=46.24 Aligned_cols=38 Identities=21% Similarity=0.286 Sum_probs=33.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 116 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~ 116 (268)
.+++|||+||+|.+|..++..+...|.+|+++.++..+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 46799999999999999999998899999988877654
No 442
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.07 E-value=0.17 Score=38.80 Aligned_cols=81 Identities=17% Similarity=0.269 Sum_probs=55.5
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENV 157 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 157 (268)
-.+.+++|+|. |.+|..+++.+...|++|++.++++++.+.+.+.++.. .++.. ++ + ...+|+++-|+
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---~l---~----~~~~Dv~vp~A 93 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---EI---Y----SVDADVFAPCA 93 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---hh---c----cccCCEEEecc
Confidence 35789999998 89999999999999999999998888877776455542 33221 11 1 11488888665
Q ss_pred Ch-hhHHhHHHhhh
Q 024411 158 GG-KLLDAVLPNMK 170 (268)
Q Consensus 158 g~-~~~~~~~~~l~ 170 (268)
.+ ..-...++.++
T Consensus 94 ~~~~I~~~~~~~l~ 107 (200)
T cd01075 94 LGGVINDDTIPQLK 107 (200)
T ss_pred cccccCHHHHHHcC
Confidence 44 33344445554
No 443
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=96.07 E-value=0.018 Score=48.07 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=32.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~ 115 (268)
++.+|||+||+|.+|..+++.+...|.+|+++++.+.
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 4578999999999999999999999999999987543
No 444
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.06 E-value=0.1 Score=40.69 Aligned_cols=102 Identities=11% Similarity=0.113 Sum_probs=58.5
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH------HH-------------HHHHHH---hcCCC-eeeecCCh
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK------DK-------------VDLLKN---KFGFD-EAFNYKEE 135 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~------~~-------------~~~~~~---~~g~~-~v~~~~~~ 135 (268)
..+|+|.|. ||+|.+++..+...|. ++..++..+ .+ .+.+++ +..+. ++.-.++-
T Consensus 30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 467999998 9999999999999998 666665211 11 111111 11111 11111110
Q ss_pred hhHHHHHHHHCCCCccEEEeCCChh--hHHhHHHhhhcCCEEEEEccccc
Q 024411 136 ADLNAALKRYFPEGIDIYFENVGGK--LLDAVLPNMKIRGRIAACGMISQ 183 (268)
Q Consensus 136 ~~~~~~~~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~ 183 (268)
-..+.+.++...++|+|+||..+- -...+..|.+.+=.++..+..++
T Consensus 109 -~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 109 -ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred -hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 122344555555899999999983 33444445555556666665443
No 445
>PRK06849 hypothetical protein; Provisional
Probab=96.02 E-value=0.1 Score=44.50 Aligned_cols=97 Identities=11% Similarity=0.055 Sum_probs=61.9
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeee--cCChhhHHHHHHHHCCC-CccEEEe
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN--YKEEADLNAALKRYFPE-GIDIYFE 155 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~--~~~~~~~~~~~~~~~~~-~~d~v~d 155 (268)
...+|||+|+..+.|+.++..++..|.+|++++..+.......+.......+. ..+.+.+.+.+.+.... ++|+++-
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vIP 82 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLIP 82 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 45789999998889999999999999999999977654332220111112221 11112567777776555 7999998
Q ss_pred CCChh-hHHhHHHhhhcCCEE
Q 024411 156 NVGGK-LLDAVLPNMKIRGRI 175 (268)
Q Consensus 156 ~~g~~-~~~~~~~~l~~~G~~ 175 (268)
+.... .+....+.+.++.++
T Consensus 83 ~~e~~~~~a~~~~~l~~~~~v 103 (389)
T PRK06849 83 TCEEVFYLSHAKEELSAYCEV 103 (389)
T ss_pred CChHHHhHHhhhhhhcCCcEE
Confidence 77652 333444556665444
No 446
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.02 E-value=0.6 Score=38.69 Aligned_cols=40 Identities=18% Similarity=-0.012 Sum_probs=34.4
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~ 120 (268)
-.+|.|+|+ |.+|...++.+...|.+|++.+.+++..+.+
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAAL 46 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 367999997 9999999999999999999999988765543
No 447
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.98 E-value=0.031 Score=46.81 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=31.4
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~ 115 (268)
++|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 37999999999999999999999999999987653
No 448
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.97 E-value=0.1 Score=40.14 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=28.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS 113 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~ 113 (268)
.+.+|+|.|+ |++|..+++.+...|. ++++++..
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 3467999997 9999999999999998 88888754
No 449
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=95.97 E-value=0.43 Score=37.06 Aligned_cols=186 Identities=14% Similarity=0.103 Sum_probs=102.4
Q ss_pred CCCCcEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCeee--ecCChhh---HHHHHHHHC
Q 024411 77 PKHGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFDEAF--NYKEEAD---LNAALKRYF 146 (268)
Q Consensus 77 ~~~~~~vlI~ga~--g~~G~~~i~l~~~~g~~V~~~~~~~~---~~~~~~~~~g~~~v~--~~~~~~~---~~~~~~~~~ 146 (268)
+-.|++.||.|-. .+++-..++.++.+|+++..+...+. +.+.+-++++.+.++ |...++. ...++++.-
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~ 82 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW 82 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence 3468899998743 45677789999999999999987764 233333356665444 2222212 223333322
Q ss_pred CCCccEEEeCCCh-h-----------------------------hHHhHHHhhhcCCEEEEEccccccc-CCCC------
Q 024411 147 PEGIDIYFENVGG-K-----------------------------LLDAVLPNMKIRGRIAACGMISQYN-LDKP------ 189 (268)
Q Consensus 147 ~~~~d~v~d~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~------ 189 (268)
|++|.++-+.+. + ..+.+..+|.++|.++.+......+ .+..
T Consensus 83 -g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGvA 161 (259)
T COG0623 83 -GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVA 161 (259)
T ss_pred -CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHHH
Confidence 268888776653 1 1345667788899998876654421 1111
Q ss_pred --ccccch----HHHHhcceeeeeEEecccccchHHHHHHHHHHHHcCCceeeeehhcccccHHHHHHHHHc---CCccc
Q 024411 190 --EGVHNL----MYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFS---GQNVG 260 (268)
Q Consensus 190 --~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~---~~~~g 260 (268)
..+... ..+-.++++......++.+.....-+..+-.++....-..+..+....+++...--++.+ ...+|
T Consensus 162 KAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiTG 241 (259)
T COG0623 162 KAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGITG 241 (259)
T ss_pred HHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhccccc
Confidence 011111 122245666666666655333333333333344443334444456667888776666654 34445
Q ss_pred eEE
Q 024411 261 KQV 263 (268)
Q Consensus 261 kvv 263 (268)
.++
T Consensus 242 ei~ 244 (259)
T COG0623 242 EII 244 (259)
T ss_pred ceE
Confidence 443
No 450
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.96 E-value=0.068 Score=42.66 Aligned_cols=33 Identities=9% Similarity=0.137 Sum_probs=29.3
Q ss_pred CCcEEEEecCc--chHHHHHHHHHHHcCCEEEEEe
Q 024411 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSA 111 (268)
Q Consensus 79 ~~~~vlI~ga~--g~~G~~~i~l~~~~g~~V~~~~ 111 (268)
+++++||+||+ +++|..++..+...|++|++++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 57899999998 4899999999999999999875
No 451
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=95.94 E-value=0.051 Score=42.64 Aligned_cols=77 Identities=18% Similarity=0.261 Sum_probs=47.5
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCC-e--eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~-~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
+||+|++|++|..++..+...|++|+++.++. ++.+...+ ..+.. . ..|..+.+.+.+.+.... .+++|.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999998999999998764 33222211 23421 1 234444312333232221 1368999
Q ss_pred EeCCCh
Q 024411 154 FENVGG 159 (268)
Q Consensus 154 ~d~~g~ 159 (268)
+.++|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 998874
No 452
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=95.94 E-value=0.061 Score=44.11 Aligned_cols=75 Identities=23% Similarity=0.385 Sum_probs=53.3
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHhcC-CC---eee--ecCChhhHHHHHHHHCCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV---DLLKNKFG-FD---EAF--NYKEEADLNAALKRYFPEG 149 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~---~~~~~~~g-~~---~v~--~~~~~~~~~~~~~~~~~~~ 149 (268)
.+..|+|+||+|-+|..++..+...|++|.++.|++++. +.++ ++. +. ..+ |..+...|.+.+. +
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAID-----G 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHHh-----C
Confidence 567899999999999999999999999999999998863 3455 554 22 122 2222214444443 5
Q ss_pred ccEEEeCCCh
Q 024411 150 IDIYFENVGG 159 (268)
Q Consensus 150 ~d~v~d~~g~ 159 (268)
+|.||-++..
T Consensus 79 cdgVfH~Asp 88 (327)
T KOG1502|consen 79 CDGVFHTASP 88 (327)
T ss_pred CCEEEEeCcc
Confidence 8999877653
No 453
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.93 E-value=0.17 Score=40.84 Aligned_cols=94 Identities=20% Similarity=0.106 Sum_probs=64.6
Q ss_pred ccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHH
Q 024411 60 LGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN 139 (268)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 139 (268)
+||.....+..|....---.|++++|.|.+..+|.-+..++...|+.|++..+... ++.
T Consensus 137 ~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~l~ 195 (285)
T PRK14191 137 VPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------DLS 195 (285)
T ss_pred CCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------HHH
Confidence 45555555555544322246999999999779999999999999999987753211 222
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcc
Q 024411 140 AALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 140 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+.+++ +|+++-++|.+.+-. -+.++++..++.+|.
T Consensus 196 ~~~~~-----ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi 230 (285)
T PRK14191 196 FYTQN-----ADIVCVGVGKPDLIK-ASMVKKGAVVVDIGI 230 (285)
T ss_pred HHHHh-----CCEEEEecCCCCcCC-HHHcCCCcEEEEeec
Confidence 23332 789999998754422 456688888888876
No 454
>PRK08317 hypothetical protein; Provisional
Probab=95.92 E-value=0.087 Score=41.35 Aligned_cols=103 Identities=19% Similarity=0.298 Sum_probs=66.2
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc-CCCeeeecCChhhHHHHHHHHCCCC
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF-GFDEAFNYKEEADLNAALKRYFPEG 149 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~~~~~~~ 149 (268)
....+.++++||-.|+ | .|..+..++...+ .++++++.++...+.+++.. .....+..... +... . ....+.
T Consensus 13 ~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~ 87 (241)
T PRK08317 13 ELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG-L-PFPDGS 87 (241)
T ss_pred HHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc-C-CCCCCC
Confidence 4457888999999997 4 3888889988873 59999999988888877321 11111111111 1110 0 011237
Q ss_pred ccEEEeCC-----Ch--hhHHhHHHhhhcCCEEEEEcc
Q 024411 150 IDIYFENV-----GG--KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 150 ~d~v~d~~-----g~--~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+|+|+-.. .. ..+..+.++|+++|.++....
T Consensus 88 ~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 88 FDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred ceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 89887532 22 467889999999999887653
No 455
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=95.92 E-value=0.039 Score=50.54 Aligned_cols=41 Identities=22% Similarity=0.151 Sum_probs=34.5
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHH
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDK 116 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~-g~~V~~~~~~~~~ 116 (268)
..+++.+|||+||+|-+|..+++.+... |.+|+++++....
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~ 352 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA 352 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh
Confidence 3467889999999999999999888765 7899999976654
No 456
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.90 E-value=0.12 Score=41.71 Aligned_cols=94 Identities=18% Similarity=0.163 Sum_probs=65.4
Q ss_pred ccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHH
Q 024411 60 LGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN 139 (268)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 139 (268)
+||.....+..|....---.|++++|.|.+..+|.-+..++...|+.|++..+.. . ++.
T Consensus 138 ~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t--------------------~-~l~ 196 (285)
T PRK14189 138 RPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT--------------------R-DLA 196 (285)
T ss_pred cCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC--------------------C-CHH
Confidence 4555555555554432234789999999988889999999999999998854211 1 333
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcc
Q 024411 140 AALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 140 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+.++ ..|+++-++|.+.+-. -+.++++..++.+|.
T Consensus 197 ~~~~-----~ADIVV~avG~~~~i~-~~~ik~gavVIDVGi 231 (285)
T PRK14189 197 AHTR-----QADIVVAAVGKRNVLT-ADMVKPGATVIDVGM 231 (285)
T ss_pred HHhh-----hCCEEEEcCCCcCccC-HHHcCCCCEEEEccc
Confidence 3333 2899999999754422 378899998888876
No 457
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=95.88 E-value=0.073 Score=42.21 Aligned_cols=81 Identities=21% Similarity=0.262 Sum_probs=51.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHhcC-----CCe--eeecCC-hhhHHHHHHHHC--
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--VDLLKNKFG-----FDE--AFNYKE-EADLNAALKRYF-- 146 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~--~~~~~~~~g-----~~~--v~~~~~-~~~~~~~~~~~~-- 146 (268)
.++.+||+|+++++|.+++.-+...|++|+++.++.+. .+.+.+... ... ..|... .+.....+.+..
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 56889999999999999999888999998888876543 233321222 111 134443 212322232222
Q ss_pred CCCccEEEeCCCh
Q 024411 147 PEGIDIYFENVGG 159 (268)
Q Consensus 147 ~~~~d~v~d~~g~ 159 (268)
-|.+|++++++|.
T Consensus 84 ~g~id~lvnnAg~ 96 (251)
T COG1028 84 FGRIDILVNNAGI 96 (251)
T ss_pred cCCCCEEEECCCC
Confidence 2368999998884
No 458
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.84 E-value=0.71 Score=36.74 Aligned_cols=95 Identities=16% Similarity=0.151 Sum_probs=60.5
Q ss_pred CCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 77 PKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 77 ~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
..+..+||-+|+ |. |..+..+++ .|.+|++++.+++..+.+++.......+..+.. .+ ....+.||+|+..
T Consensus 40 ~~~~~~vLDiGc-G~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~-~~-----~~~~~~fD~V~s~ 110 (251)
T PRK10258 40 QRKFTHVLDAGC-GP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIE-SL-----PLATATFDLAWSN 110 (251)
T ss_pred ccCCCeEEEeeC-CC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcc-cC-----cCCCCcEEEEEEC
Confidence 345678999987 33 555555544 588999999999988888733222222222211 11 0112269999864
Q ss_pred CC-----h--hhHHhHHHhhhcCCEEEEEcc
Q 024411 157 VG-----G--KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 157 ~g-----~--~~~~~~~~~l~~~G~~v~~g~ 180 (268)
.. . ..+..+.+.|+|+|.++....
T Consensus 111 ~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 111 LAVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred chhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 42 1 467888999999999887644
No 459
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.82 E-value=0.48 Score=37.15 Aligned_cols=89 Identities=18% Similarity=0.236 Sum_probs=56.4
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCC---EEEEEeCC----HHH--------HHHHHHhcCCCeeeecCChhhHHHHH
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGC---YVVGSAGS----KDK--------VDLLKNKFGFDEAFNYKEEADLNAAL 142 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~---~V~~~~~~----~~~--------~~~~~~~~g~~~v~~~~~~~~~~~~~ 142 (268)
-.+.+++|+|+ |+.|..++..+...|+ ++++++++ .++ .++++ .++... .+ . ++.+.+
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL 95 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence 45689999998 9999999999988897 48898887 333 22333 332111 11 1 333333
Q ss_pred HHHCCCCccEEEeCCChh-hHHhHHHhhhcCCEEEEE
Q 024411 143 KRYFPEGIDIYFENVGGK-LLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 143 ~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~ 178 (268)
+ ++|+++++++.. .-...++.+.++..+..+
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~l 127 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFAL 127 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEe
Confidence 2 389999999742 224566667676655543
No 460
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.82 E-value=0.1 Score=44.07 Aligned_cols=79 Identities=15% Similarity=0.161 Sum_probs=49.0
Q ss_pred CCCcEEEEecCcchHHHH--HHHHHHHcCCEEEEEeCCH--HH-------------HH-HHHHhcCCC-eee--ecCChh
Q 024411 78 KHGECVFISAASGAVGQL--VGQFAKLLGCYVVGSAGSK--DK-------------VD-LLKNKFGFD-EAF--NYKEEA 136 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~--~i~l~~~~g~~V~~~~~~~--~~-------------~~-~~~~~~g~~-~v~--~~~~~~ 136 (268)
..++++||+|+++++|++ .++.+ ..|++|+++.... .+ .. .+. +.|.. ..+ |....+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence 456899999999999999 56666 8999988887322 11 22 233 55543 222 333321
Q ss_pred h---HHHHHHHHCCCCccEEEeCCCh
Q 024411 137 D---LNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 137 ~---~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
. +.+.+.+.. |++|+++++++.
T Consensus 117 ~v~~lie~I~e~~-G~IDiLVnSaA~ 141 (398)
T PRK13656 117 IKQKVIELIKQDL-GQVDLVVYSLAS 141 (398)
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCcc
Confidence 2 333333332 479999998885
No 461
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.80 E-value=0.059 Score=42.67 Aligned_cols=102 Identities=15% Similarity=0.220 Sum_probs=66.1
Q ss_pred hhcCCCCCcEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHh---cCCCe-e-eecCCh--hhHHHHHH
Q 024411 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNK---FGFDE-A-FNYKEE--ADLNAALK 143 (268)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~-v-~~~~~~--~~~~~~~~ 143 (268)
....+.||++|+=.| .|.|.++..+++..|. +|+.....+++.+.+++. .|... + +...+- +.+...
T Consensus 34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~-- 109 (247)
T PF08704_consen 34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEE-- 109 (247)
T ss_dssp HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT--
T ss_pred HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceeccccccc--
Confidence 346899999998776 4458888888888874 999999999988777643 45532 2 222210 022111
Q ss_pred HHCCCCccEE-EeCCCh-hhHHhHHHhh-hcCCEEEEEcc
Q 024411 144 RYFPEGIDIY-FENVGG-KLLDAVLPNM-KIRGRIAACGM 180 (268)
Q Consensus 144 ~~~~~~~d~v-~d~~g~-~~~~~~~~~l-~~~G~~v~~g~ 180 (268)
..+.+|.| +|--.. ..+..+.+.| +++|+++.+..
T Consensus 110 --~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 110 --LESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp ---TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred --ccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 12368866 577776 8999999999 89999999855
No 462
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.76 E-value=0.12 Score=42.92 Aligned_cols=93 Identities=12% Similarity=0.081 Sum_probs=62.5
Q ss_pred CCCcEEEEecCcchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHhc----CCCeeeecCChhhHHHHHHHHCCCCcc
Q 024411 78 KHGECVFISAASGAVGQLVGQFA-KLLGC-YVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~-~~~g~-~V~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
...++++|+|+ |..|...+..+ ...++ +|.+..+++++.+.+.+++ +.. +..+. ++.+.+. ..|
T Consensus 125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD 194 (325)
T PRK08618 125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD 194 (325)
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence 35678999997 99998776554 45576 8888899988776654333 332 22222 3333332 489
Q ss_pred EEEeCCChhhHHhHHHhhhcCCEEEEEccc
Q 024411 152 IYFENVGGKLLDAVLPNMKIRGRIAACGMI 181 (268)
Q Consensus 152 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 181 (268)
+|+.|++....... +.++++-++..+|..
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSF 223 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCC
Confidence 99999987433333 888999999899874
No 463
>PLN03139 formate dehydrogenase; Provisional
Probab=95.76 E-value=0.26 Score=41.86 Aligned_cols=89 Identities=26% Similarity=0.248 Sum_probs=61.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
.|++|.|+|. |.+|..+++.++.+|.+|++.+++....+... +.|...+ . ++.+.+.+ .|+|+-++.
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~-----~-~l~ell~~-----sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE-----E-DLDAMLPK-----CDVVVINTP 264 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec-----C-CHHHHHhh-----CCEEEEeCC
Confidence 5789999996 99999999999999999999887643333333 4443211 1 34433432 788887776
Q ss_pred h-hh----H-HhHHHhhhcCCEEEEEcc
Q 024411 159 G-KL----L-DAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 159 ~-~~----~-~~~~~~l~~~G~~v~~g~ 180 (268)
. +. + ...+..++++..+|.++-
T Consensus 265 lt~~T~~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence 3 21 2 356788889888888865
No 464
>PLN02214 cinnamoyl-CoA reductase
Probab=95.74 E-value=0.079 Score=44.37 Aligned_cols=38 Identities=21% Similarity=0.327 Sum_probs=33.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 116 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~ 116 (268)
++.+|||+||+|.+|..++..+...|.+|+++.++.++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 46789999999999999999999999999999887653
No 465
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.74 E-value=0.13 Score=44.65 Aligned_cols=44 Identities=23% Similarity=0.370 Sum_probs=35.9
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCC
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNKFGF 126 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~-~~~~~~~g~ 126 (268)
+|.|+||.|.+|.+++..++..|.+|++.++++++. +.+. ++|.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~-~~gv 46 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK-ELGV 46 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH-HcCC
Confidence 588999779999999999999999999999887764 3344 5554
No 466
>PLN00203 glutamyl-tRNA reductase
Probab=95.74 E-value=0.18 Score=44.66 Aligned_cols=71 Identities=23% Similarity=0.325 Sum_probs=51.6
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCe--eeecCChhhHHHHHHHHCCCCccEEEeC
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDIYFEN 156 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 156 (268)
+.+|+|+|+ |.+|.+++..+...|+ +|+++.++.++.+.+.++++... +...+ +....+ ..+|+||.|
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~---dl~~al-----~~aDVVIsA 336 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD---EMLACA-----AEADVVFTS 336 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh---hHHHHH-----hcCCEEEEc
Confidence 678999998 9999999999999997 89999999988777764564211 11111 222222 248999999
Q ss_pred CCh
Q 024411 157 VGG 159 (268)
Q Consensus 157 ~g~ 159 (268)
++.
T Consensus 337 T~s 339 (519)
T PLN00203 337 TSS 339 (519)
T ss_pred cCC
Confidence 875
No 467
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=95.73 E-value=0.029 Score=44.73 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=49.9
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecC-ChhhHHHHHHHHCCCCccEEEeCCCh
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK-EEADLNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~-~~~~~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
+|||+||||- |..++..+...|.+|+++.+++...+.+. ..|...+.... +.+++...+++ .++|+|+|++..
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l~~~~l~~~l~~---~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGALDPQELREFLKR---HSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCCCHHHHHHHHHh---cCCCEEEEcCCH
Confidence 6999999776 99888888888999999998887666665 55544443222 11133333322 379999998865
No 468
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.73 E-value=0.13 Score=41.87 Aligned_cols=92 Identities=17% Similarity=0.210 Sum_probs=63.5
Q ss_pred ccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHhcCCCeeeecCChhhH
Q 024411 60 LGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEADL 138 (268)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~ 138 (268)
+||.....+..|....---.|++|.|+|.++.+|.-++.++...|+.|++.. ++.+ +
T Consensus 138 ~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~----------------------l 195 (296)
T PRK14188 138 VPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD----------------------L 195 (296)
T ss_pred cCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC----------------------H
Confidence 4666555555554433235799999999889999999999999999999884 3321 1
Q ss_pred HHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcc
Q 024411 139 NAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 139 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~ 180 (268)
.+..+ ..|+++-++|. ..+...+ ++++..++.+|.
T Consensus 196 ~e~~~-----~ADIVIsavg~~~~v~~~~--lk~GavVIDvGi 231 (296)
T PRK14188 196 PAVCR-----RADILVAAVGRPEMVKGDW--IKPGATVIDVGI 231 (296)
T ss_pred HHHHh-----cCCEEEEecCChhhcchhe--ecCCCEEEEcCC
Confidence 11111 27888888887 4344333 888888888876
No 469
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.71 E-value=0.24 Score=41.32 Aligned_cols=87 Identities=23% Similarity=0.272 Sum_probs=61.4
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
.|++|.|+|. |.+|..+++.++.+|.+|++.+++.... ... ..+.. +. ++.+.+.+ .|+|+-++.
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~----~~---~l~ell~~-----aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAE----YR---PLEELLRE-----SDFVSLHVP 213 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCE----ec---CHHHHHhh-----CCEEEEeCC
Confidence 5789999997 9999999999999999999998765432 222 33431 11 33434433 799988876
Q ss_pred h-h----hH-HhHHHhhhcCCEEEEEcc
Q 024411 159 G-K----LL-DAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 159 ~-~----~~-~~~~~~l~~~G~~v~~g~ 180 (268)
. + .+ ...+..++++..++.++.
T Consensus 214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred CChHHhhccCHHHHhcCCCCeEEEECcC
Confidence 3 2 12 356788889988888865
No 470
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=95.70 E-value=0.22 Score=42.79 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=62.4
Q ss_pred cEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCH--HHH-HHHHHhcCCCeeeecCChhhHHH---------------
Q 024411 81 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSK--DKV-DLLKNKFGFDEAFNYKEEADLNA--------------- 140 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~--g~~V~~~~~~~--~~~-~~~~~~~g~~~v~~~~~~~~~~~--------------- 140 (268)
.+|.|+|+||++|..++++.+.. .++|++..... +.+ +.++ ++.+..+.-.+. ....
T Consensus 58 KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag~Ni~lL~~q~~-~f~p~~v~v~d~--~~~~~l~~~l~~~~~~~~v 134 (454)
T PLN02696 58 KPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVR-KFKPKLVAVRNE--SLVDELKEALADLDDKPEI 134 (454)
T ss_pred cEEEEecCCcHhhHHHHHHHHhCccccEEEEEECCCCHHHHHHHHH-HhCCCEEEEcCH--HHHHHHHHhhcCCCCCcEE
Confidence 68999999999999999998875 45777665332 222 2233 677665544332 2122
Q ss_pred -----HHHHHCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEEc
Q 024411 141 -----ALKRYFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAACG 179 (268)
Q Consensus 141 -----~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g 179 (268)
.+.+.... .+|+|++...+ ..+.-.+..++.|-++.+..
T Consensus 135 l~G~egl~~la~~~evDiVV~AIvG~aGL~pTl~AIkaGK~VALAN 180 (454)
T PLN02696 135 IPGEEGIVEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALAN 180 (454)
T ss_pred EECHHHHHHHHcCCCCCEEEEeCccccchHHHHHHHHCCCcEEEec
Confidence 22222222 58999998887 67777788888877766553
No 471
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.69 E-value=0.16 Score=40.98 Aligned_cols=96 Identities=14% Similarity=0.153 Sum_probs=58.7
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC------CeeeecCChhhHHHHHHHHCCCCcc
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEADLNAALKRYFPEGID 151 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~~~~~~~~d 151 (268)
+.++||++|+ | .|..+..++++... ++.+++.+++-.+.+++.+.. +.-++.... +....+++ ..+.+|
T Consensus 72 ~p~~VL~iG~-G-~G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~-D~~~~l~~-~~~~yD 147 (270)
T TIGR00417 72 NPKHVLVIGG-G-DGGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQID-DGFKFLAD-TENTFD 147 (270)
T ss_pred CCCEEEEEcC-C-chHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEEC-chHHHHHh-CCCCcc
Confidence 4459999996 3 35566677776644 899999888877777743311 011111111 33334433 234799
Q ss_pred EEE-eCC---C-------hhhHHhHHHhhhcCCEEEEE
Q 024411 152 IYF-ENV---G-------GKLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 152 ~v~-d~~---g-------~~~~~~~~~~l~~~G~~v~~ 178 (268)
+|+ |.. + .+.++.+.+.|+++|.++..
T Consensus 148 vIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 148 VIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQ 185 (270)
T ss_pred EEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEc
Confidence 886 433 1 13457888999999998876
No 472
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.67 E-value=0.15 Score=37.48 Aligned_cols=95 Identities=16% Similarity=0.100 Sum_probs=56.2
Q ss_pred hccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhH
Q 024411 59 ILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL 138 (268)
Q Consensus 59 ~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 138 (268)
.+|+.....+..|....---.|++++|.|.+..+|.-+..++...|+.|+....... ++
T Consensus 15 ~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~---------------------~l 73 (160)
T PF02882_consen 15 FVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK---------------------NL 73 (160)
T ss_dssp S--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS---------------------SH
T ss_pred CcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC---------------------cc
Confidence 344444455555544433467899999999889999999999999999998764321 22
Q ss_pred HHHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcc
Q 024411 139 NAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 139 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 180 (268)
.+.++ ..|+++-++|.+.+- --+.++++..++.+|.
T Consensus 74 ~~~~~-----~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~ 109 (160)
T PF02882_consen 74 QEITR-----RADIVVSAVGKPNLI-KADWIKPGAVVIDVGI 109 (160)
T ss_dssp HHHHT-----TSSEEEE-SSSTT-B--GGGS-TTEEEEE--C
T ss_pred cceee-----eccEEeeeecccccc-ccccccCCcEEEecCC
Confidence 22222 378899888874431 2346788888888776
No 473
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.67 E-value=0.062 Score=41.88 Aligned_cols=98 Identities=13% Similarity=0.079 Sum_probs=60.7
Q ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee--------------eecCChhhHHHH
Q 024411 76 SPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA--------------FNYKEEADLNAA 141 (268)
Q Consensus 76 ~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v--------------~~~~~~~~~~~~ 141 (268)
.+.++.+||+.|+ |.|.-++-+|. +|++|++++.++...+.+.++.+.... +..... ++.+.
T Consensus 34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG-DFFAL 109 (218)
T ss_pred CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC-cccCC
Confidence 3456789999996 56888888875 799999999999877765424433210 110000 11100
Q ss_pred HHHHCCCCccEEEeCCC---------hhhHHhHHHhhhcCCEEEEE
Q 024411 142 LKRYFPEGIDIYFENVG---------GKLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 142 ~~~~~~~~~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~ 178 (268)
.....+.||.++|... ...+..+.++|+|+|++..+
T Consensus 110 -~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 110 -TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred -CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 0001126899998653 13477888999999975554
No 474
>PLN02427 UDP-apiose/xylose synthase
Probab=95.66 E-value=0.074 Score=45.32 Aligned_cols=75 Identities=15% Similarity=0.070 Sum_probs=48.3
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCC------Ceee--ecCChhhHHHHHHHHCCC
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGF------DEAF--NYKEEADLNAALKRYFPE 148 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~-g~~V~~~~~~~~~~~~~~~~~g~------~~v~--~~~~~~~~~~~~~~~~~~ 148 (268)
-+..+|||+||+|-+|..+++.+... |.+|++++++.++...+. ..+. ...+ |..+. ..+.+...
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~----~~l~~~~~- 85 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL-EPDTVPWSGRIQFHRINIKHD----SRLEGLIK- 85 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh-ccccccCCCCeEEEEcCCCCh----HHHHHHhh-
Confidence 34457999999999999999988877 589999997766554443 2221 1122 22222 12322222
Q ss_pred CccEEEeCCC
Q 024411 149 GIDIYFENVG 158 (268)
Q Consensus 149 ~~d~v~d~~g 158 (268)
++|+||.+++
T Consensus 86 ~~d~ViHlAa 95 (386)
T PLN02427 86 MADLTINLAA 95 (386)
T ss_pred cCCEEEEccc
Confidence 4899999886
No 475
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.66 E-value=0.13 Score=41.82 Aligned_cols=94 Identities=18% Similarity=0.234 Sum_probs=64.5
Q ss_pred hccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhH
Q 024411 59 ILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL 138 (268)
Q Consensus 59 ~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 138 (268)
.+||........|....---.|++|.++|.++.+|.-++.++...|+.|++..+.... .
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~---------------------l 196 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD---------------------A 196 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC---------------------H
Confidence 3466655555555444333579999999987799999999999999999998643221 1
Q ss_pred HHHHHHHCCCCccEEEeCCCh-hhHHhHHHhhhcCCEEEEEcc
Q 024411 139 NAALKRYFPEGIDIYFENVGG-KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 139 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~ 180 (268)
.+..+ ..|+++-++|. ..+...+ ++++..++.+|.
T Consensus 197 ~e~~~-----~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgi 232 (301)
T PRK14194 197 KALCR-----QADIVVAAVGRPRLIDADW--LKPGAVVIDVGI 232 (301)
T ss_pred HHHHh-----cCCEEEEecCChhcccHhh--ccCCcEEEEecc
Confidence 11222 27888888887 4444433 888888888874
No 476
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.64 E-value=0.19 Score=40.95 Aligned_cols=77 Identities=13% Similarity=0.123 Sum_probs=46.1
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHhcCCC--eeeecCChhhHHHHHHHHCCCCccE
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK---DKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDI 152 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~ 152 (268)
.+++++|+|+ ||.+.+++..+...|+ +++++.|++ ++.+.+.+.++.. ..+..... +-...+.+. ...+|+
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~aDi 199 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEA-LASADI 199 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhh-cccCCE
Confidence 5678999998 8889887777778887 899999984 3544444344321 11111110 101112221 125899
Q ss_pred EEeCCC
Q 024411 153 YFENVG 158 (268)
Q Consensus 153 v~d~~g 158 (268)
+++|+.
T Consensus 200 vINaTp 205 (288)
T PRK12749 200 LTNGTK 205 (288)
T ss_pred EEECCC
Confidence 999875
No 477
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=95.63 E-value=0.033 Score=46.06 Aligned_cols=71 Identities=20% Similarity=0.202 Sum_probs=47.3
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
+++|+|++|.+|..+++.+...|.+|+++.+++++..... ..+... ..|..+.+.+.+.+ . ++|+++++++
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~----~-~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDPASLRKAV----A-GCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCHHHHHHHH----h-CCCEEEEece
Confidence 5899999999999999999999999999998766543332 233322 12333321222222 1 4799998875
No 478
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=95.63 E-value=0.05 Score=46.14 Aligned_cols=37 Identities=22% Similarity=0.295 Sum_probs=33.2
Q ss_pred CCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024411 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 114 (268)
Q Consensus 78 ~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~ 114 (268)
..+.+|||+||+|-+|..++..+...|.+|+++++..
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 4668999999999999999999999999999998753
No 479
>PLN02650 dihydroflavonol-4-reductase
Probab=95.61 E-value=0.087 Score=44.23 Aligned_cols=41 Identities=22% Similarity=0.196 Sum_probs=34.6
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~ 119 (268)
..++|||+||+|.+|..++..+...|.+|++++++.++.+.
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~ 44 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKK 44 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHH
Confidence 35689999999999999999999999999998877655443
No 480
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.58 E-value=0.41 Score=38.48 Aligned_cols=33 Identities=12% Similarity=0.103 Sum_probs=27.9
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAG 112 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~ 112 (268)
.+.+|+|.|+ |++|..++..+...|. ++++++.
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~ 62 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDM 62 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeC
Confidence 3467999997 9999999999999996 7777773
No 481
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.58 E-value=0.11 Score=41.45 Aligned_cols=93 Identities=19% Similarity=0.177 Sum_probs=63.9
Q ss_pred cCCCCCcEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEE
Q 024411 75 CSPKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIY 153 (268)
Q Consensus 75 ~~~~~~~~vlI~ga~g~~G~~~i~l~~~~-g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v 153 (268)
....++.+||=.|+ |.|..+..+++.. +.+|++++.++...+.++ +.+.. .+.. +.. .+. ..+.||+|
T Consensus 25 l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~-~~~~----d~~-~~~--~~~~fD~v 93 (255)
T PRK14103 25 VGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVD-ARTG----DVR-DWK--PKPDTDVV 93 (255)
T ss_pred CCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCc-EEEc----Chh-hCC--CCCCceEE
Confidence 35677889999986 3477777888775 679999999999888887 54433 2221 221 111 12379999
Q ss_pred EeCCC-----h--hhHHhHHHhhhcCCEEEEE
Q 024411 154 FENVG-----G--KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 154 ~d~~g-----~--~~~~~~~~~l~~~G~~v~~ 178 (268)
+-... . ..+..+.+.|+|+|+++..
T Consensus 94 ~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 94 VSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred EEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 86442 2 4577889999999998765
No 482
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.57 E-value=0.21 Score=40.16 Aligned_cols=97 Identities=18% Similarity=0.231 Sum_probs=64.1
Q ss_pred cCCCCCcEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhcC------CCe--eeecCChhhHHHHHHH
Q 024411 75 CSPKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKFG------FDE--AFNYKEEADLNAALKR 144 (268)
Q Consensus 75 ~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~~~~~~~~~~~g------~~~--v~~~~~~~~~~~~~~~ 144 (268)
..+.++++||-.|+ |.|..+..+++..+ .+|++++.+++..+.+++... ... .+..+.. ++
T Consensus 69 ~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~-~l------ 139 (261)
T PLN02233 69 SGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDAT-DL------ 139 (261)
T ss_pred hCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccc-cC------
Confidence 46778999999986 34667777787765 499999999998888763322 111 1211111 11
Q ss_pred HCCC-CccEEEeCCC-----h--hhHHhHHHhhhcCCEEEEEcc
Q 024411 145 YFPE-GIDIYFENVG-----G--KLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 145 ~~~~-~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 180 (268)
..++ .||.|+-..+ . ..+.++.+.|+|+|+++....
T Consensus 140 p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~ 183 (261)
T PLN02233 140 PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDF 183 (261)
T ss_pred CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence 0123 6998875332 2 467899999999999988755
No 483
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=95.56 E-value=0.11 Score=40.87 Aligned_cols=76 Identities=14% Similarity=0.140 Sum_probs=46.4
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHh---cCCC-e--eeecCChhhHHHHHHHHC--CCCccEE
Q 024411 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF--PEGIDIY 153 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~-~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v 153 (268)
++|+|++|++|..+++.+...|++|++++++. ++.+.+.++ .+.. . ..|..+.++....+.+.. .+..|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999999999999887653 333322212 2321 1 234443323333333221 2367888
Q ss_pred EeCCC
Q 024411 154 FENVG 158 (268)
Q Consensus 154 ~d~~g 158 (268)
+.+.|
T Consensus 81 i~~ag 85 (239)
T TIGR01831 81 VLNAG 85 (239)
T ss_pred EECCC
Confidence 88776
No 484
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.56 E-value=0.23 Score=35.68 Aligned_cols=94 Identities=13% Similarity=0.063 Sum_probs=63.0
Q ss_pred ccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHH
Q 024411 60 LGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN 139 (268)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 139 (268)
.|+........+....---.|++++|+|.+..+|.-++.++...|++|+...+... ++.
T Consensus 8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~---------------------~l~ 66 (140)
T cd05212 8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI---------------------QLQ 66 (140)
T ss_pred cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc---------------------CHH
Confidence 34443444444443322357899999999999999999999999999998874321 122
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcc
Q 024411 140 AALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 140 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+.++ .+|+++-++|...+ ---+.+++|-.++.+|.
T Consensus 67 ~~v~-----~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~ 101 (140)
T cd05212 67 SKVH-----DADVVVVGSPKPEK-VPTEWIKPGATVINCSP 101 (140)
T ss_pred HHHh-----hCCEEEEecCCCCc-cCHHHcCCCCEEEEcCC
Confidence 2222 27888888887432 22456888888887665
No 485
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.56 E-value=0.17 Score=40.85 Aligned_cols=94 Identities=16% Similarity=0.087 Sum_probs=65.9
Q ss_pred ccchHHHHHHHhhhhcCCCCCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHH
Q 024411 60 LGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN 139 (268)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 139 (268)
.||.....+..|....---.|++++|.|.+.-+|.-+..++...|+.|++..+.-. ++.
T Consensus 139 ~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~---------------------~l~ 197 (285)
T PRK10792 139 RPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK---------------------NLR 197 (285)
T ss_pred CCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC---------------------CHH
Confidence 46655556656644322346899999999777999999999999999988874311 233
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHhHHHhhhcCCEEEEEcc
Q 024411 140 AALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 140 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 180 (268)
+..+ .+|+++.++|.+.+-. -+.++++..++.+|.
T Consensus 198 ~~~~-----~ADIvi~avG~p~~v~-~~~vk~gavVIDvGi 232 (285)
T PRK10792 198 HHVR-----NADLLVVAVGKPGFIP-GEWIKPGAIVIDVGI 232 (285)
T ss_pred HHHh-----hCCEEEEcCCCccccc-HHHcCCCcEEEEccc
Confidence 3333 2899999999754322 277888888888875
No 486
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=95.55 E-value=0.054 Score=44.13 Aligned_cols=59 Identities=19% Similarity=0.329 Sum_probs=38.2
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
+|||+|++|.+|..+...++..|.+|+.+.++ . +|..+.+.+.+.+.+. .+|+|++|++
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------~------~dl~d~~~~~~~~~~~---~pd~Vin~aa 60 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS---------D------LDLTDPEAVAKLLEAF---KPDVVINCAA 60 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------C------S-TTSHHHHHHHHHHH-----SEEEE---
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------h------cCCCCHHHHHHHHHHh---CCCeEeccce
Confidence 68999999999999999999999999999755 1 1222211333333332 4789999886
No 487
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.55 E-value=0.31 Score=36.06 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=57.8
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCCh-h
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG-K 160 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~ 160 (268)
+|-++|. |.+|..++.-+...|.+|++.++++++.+.+. +.|+. .. . +..+.+.+ .|+|+-|+.+ .
T Consensus 3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~-~~--~---s~~e~~~~-----~dvvi~~v~~~~ 69 (163)
T PF03446_consen 3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAE-VA--D---SPAEAAEQ-----ADVVILCVPDDD 69 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEE-EE--S---SHHHHHHH-----BSEEEE-SSSHH
T ss_pred EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhh-hh--h---hhhhHhhc-----ccceEeecccch
Confidence 6788896 99999999999999999999999999998888 55632 21 1 33334433 6899988876 4
Q ss_pred hHHh------HHHhhhcCCEEEEEcc
Q 024411 161 LLDA------VLPNMKIRGRIAACGM 180 (268)
Q Consensus 161 ~~~~------~~~~l~~~G~~v~~g~ 180 (268)
..+. ....+.++..++.++.
T Consensus 70 ~v~~v~~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 70 AVEAVLFGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp HHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred hhhhhhhhhHHhhccccceEEEecCC
Confidence 4443 3444556666666655
No 488
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.54 E-value=0.014 Score=47.52 Aligned_cols=146 Identities=22% Similarity=0.245 Sum_probs=79.1
Q ss_pred CCCCCCeEEeccccceeEeecCCcceeecCCCCCchhhhhhccchHHHHHHHhhhhcC-CCCCcEEEEecCcchHHHHHH
Q 024411 19 EFNKGDLVWGMTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCS-PKHGECVFISAASGAVGQLVG 97 (268)
Q Consensus 19 ~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~-~~~~~~vlI~ga~g~~G~~~i 97 (268)
.+++|++.+...+|.++-.-+.+.++.++| + +.|-.. ...|-..||..+.. ..++++||=.|. |.|.+++
T Consensus 107 P~~vg~~~~I~P~w~~~~~~~~~~~I~idP-g--~AFGTG----~H~TT~lcl~~l~~~~~~g~~vLDvG~--GSGILai 177 (295)
T PF06325_consen 107 PIRVGDRLVIVPSWEEYPEPPDEIVIEIDP-G--MAFGTG----HHPTTRLCLELLEKYVKPGKRVLDVGC--GSGILAI 177 (295)
T ss_dssp -EEECTTEEEEETT----SSTTSEEEEEST-T--SSS-SS----HCHHHHHHHHHHHHHSSTTSEEEEES---TTSHHHH
T ss_pred cEEECCcEEEECCCcccCCCCCcEEEEECC-C--CcccCC----CCHHHHHHHHHHHHhccCCCEEEEeCC--cHHHHHH
Confidence 356777777777888873334444677744 3 332111 12232333322222 578899999995 3365555
Q ss_pred HHHHHcCC-EEEEEeCCHHHHHHHHHhc---CCC-eeeecCChhhHHHHHHHHCCCCccEEEeCCChh----hHHhHHHh
Q 024411 98 QFAKLLGC-YVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEADLNAALKRYFPEGIDIYFENVGGK----LLDAVLPN 168 (268)
Q Consensus 98 ~l~~~~g~-~V~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~----~~~~~~~~ 168 (268)
..++ +|+ +|++++..+...+.+++.. +.. .+...... +. ..+.||+|+-..-.. ......++
T Consensus 178 aA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~~-------~~~~~dlvvANI~~~vL~~l~~~~~~~ 248 (295)
T PF06325_consen 178 AAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-DL-------VEGKFDLVVANILADVLLELAPDIASL 248 (295)
T ss_dssp HHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-CT-------CCS-EEEEEEES-HHHHHHHHHHCHHH
T ss_pred HHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-cc-------ccccCCEEEECCCHHHHHHHHHHHHHh
Confidence 5555 587 8999998887666655321 222 11111111 11 114799998665542 34556678
Q ss_pred hhcCCEEEEEcccc
Q 024411 169 MKIRGRIAACGMIS 182 (268)
Q Consensus 169 l~~~G~~v~~g~~~ 182 (268)
++++|.+++.|...
T Consensus 249 l~~~G~lIlSGIl~ 262 (295)
T PF06325_consen 249 LKPGGYLILSGILE 262 (295)
T ss_dssp EEEEEEEEEEEEEG
T ss_pred hCCCCEEEEccccH
Confidence 88999999998754
No 489
>PRK14967 putative methyltransferase; Provisional
Probab=95.52 E-value=0.56 Score=36.65 Aligned_cols=94 Identities=21% Similarity=0.144 Sum_probs=60.9
Q ss_pred cCCCCCcEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHh---cCCC-eeeecCChhhHHHHHHHHCCCC
Q 024411 75 CSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNK---FGFD-EAFNYKEEADLNAALKRYFPEG 149 (268)
Q Consensus 75 ~~~~~~~~vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~~~~~~~~~ 149 (268)
..+.++++||-.|+ |. |..++.+++. ++ +|++++.++...+.+++. .+.. .+++. ++...+ ..+.
T Consensus 32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~~---~~~~ 101 (223)
T PRK14967 32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARAV---EFRP 101 (223)
T ss_pred cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhhc---cCCC
Confidence 35678899999996 54 8888888875 55 999999998877766522 2332 12221 332221 1237
Q ss_pred ccEEEeCCCh----------------------------hhHHhHHHhhhcCCEEEEE
Q 024411 150 IDIYFENVGG----------------------------KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 150 ~d~v~d~~g~----------------------------~~~~~~~~~l~~~G~~v~~ 178 (268)
||+|+....- ..+..+.+.|+++|+++.+
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9999864210 1245677899999998875
No 490
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=95.52 E-value=0.11 Score=42.52 Aligned_cols=93 Identities=19% Similarity=0.184 Sum_probs=66.5
Q ss_pred cEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eeecCChhhHHHHHHHHCCCCccEEEeCCCh
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDIYFENVGG 159 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 159 (268)
..++|.||+|-.|-+.+..++..|.+-....+|..+++.+..++|... ++..-.+ ...+.+. .++++|++|+|.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p-~~~~~~~----~~~~VVlncvGP 81 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVP-AALEAMA----SRTQVVLNCVGP 81 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCH-HHHHHHH----hcceEEEecccc
Confidence 357899999999999999999999988888999999998887888863 3333222 3333332 258999999997
Q ss_pred -hh--HHhHHHhhhcCCEEEEE
Q 024411 160 -KL--LDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 160 -~~--~~~~~~~l~~~G~~v~~ 178 (268)
.. ......|+..+-.+..+
T Consensus 82 yt~~g~plv~aC~~~GTdY~Di 103 (382)
T COG3268 82 YTRYGEPLVAACAAAGTDYADI 103 (382)
T ss_pred ccccccHHHHHHHHhCCCeeec
Confidence 32 23444455555566655
No 491
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=95.50 E-value=0.059 Score=44.25 Aligned_cols=73 Identities=8% Similarity=0.051 Sum_probs=43.8
Q ss_pred EEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCH--HHHHHHHHhcCC---Ceee--ecCChhhHHHHHHHHCCC-Ccc
Q 024411 82 CVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSK--DKVDLLKNKFGF---DEAF--NYKEEADLNAALKRYFPE-GID 151 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~--~~~~~~~~~~g~---~~v~--~~~~~~~~~~~~~~~~~~-~~d 151 (268)
+|+|+||+|.+|..+++.+...| .+|+++.+.. .+.+.+. .+.. ..++ |..+.+.+.+.+ .+ .+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~----~~~~~d 75 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-DLEDNPRYRFVKGDIGDRELVSRLF----TEHQPD 75 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-hhccCCCcEEEEcCCcCHHHHHHHH----hhcCCC
Confidence 48999999999999999887766 6888876421 2222222 2211 1222 333321232222 23 589
Q ss_pred EEEeCCCh
Q 024411 152 IYFENVGG 159 (268)
Q Consensus 152 ~v~d~~g~ 159 (268)
+|+++++.
T Consensus 76 ~vi~~a~~ 83 (317)
T TIGR01181 76 AVVHFAAE 83 (317)
T ss_pred EEEEcccc
Confidence 99999874
No 492
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.49 E-value=0.28 Score=39.22 Aligned_cols=94 Identities=13% Similarity=0.192 Sum_probs=64.1
Q ss_pred cCCCCCcEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCC-CCccE
Q 024411 75 CSPKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP-EGIDI 152 (268)
Q Consensus 75 ~~~~~~~~vlI~ga~g~~G~~~i~l~~~~-g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~-~~~d~ 152 (268)
..+.++++||=+|+ |.|..+..+++.. +.+|++++.++...+.+++.+.....+.. +.. +... +.+|+
T Consensus 27 ~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~----~~~~~~~fD~ 96 (258)
T PRK01683 27 VPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIA----SWQPPQALDL 96 (258)
T ss_pred CCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chh----ccCCCCCccE
Confidence 35678899999986 4577788888776 56999999999988888734322222222 211 1112 37998
Q ss_pred EEeCCC-----h--hhHHhHHHhhhcCCEEEEE
Q 024411 153 YFENVG-----G--KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 153 v~d~~g-----~--~~~~~~~~~l~~~G~~v~~ 178 (268)
++.... . ..+..+.+.|+|+|+++..
T Consensus 97 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 97 IFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred EEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 875433 2 4578889999999998775
No 493
>PRK07574 formate dehydrogenase; Provisional
Probab=95.48 E-value=0.13 Score=43.61 Aligned_cols=89 Identities=16% Similarity=0.106 Sum_probs=59.5
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
.+.+|.|+|. |.+|..+++.++.+|.+|++.+++....+... .++... +. ++.+.++ ..|+|+-+..
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~~---~l~ell~-----~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---HV---SFDSLVS-----VCDVVTIHCP 257 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---cC---CHHHHhh-----cCCEEEEcCC
Confidence 4678999997 99999999999999999999997753333333 444321 11 3333332 3788887776
Q ss_pred h-hh----H-HhHHHhhhcCCEEEEEcc
Q 024411 159 G-KL----L-DAVLPNMKIRGRIAACGM 180 (268)
Q Consensus 159 ~-~~----~-~~~~~~l~~~G~~v~~g~ 180 (268)
. +. + ...+..|+++..+|.++.
T Consensus 258 lt~~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence 3 21 1 356677888887777754
No 494
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=95.48 E-value=0.052 Score=44.64 Aligned_cols=73 Identities=12% Similarity=0.105 Sum_probs=44.2
Q ss_pred EEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeee-ecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024411 83 VFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEADLNAALKRYFPEGIDIYFENVG 158 (268)
Q Consensus 83 vlI~ga~g~~G~~~i~l~~~~g~-~V~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~d~v~d~~g 158 (268)
|||+||+|.+|..+++.+...|. .|+++.+...... .. .+...... +.+.. +..+.+.+....++|+|+.+++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~-~~~~~~~~~d~~~~-~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FL-NLADLVIADYIDKE-DFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hh-hhhheeeeccCcch-hHHHHHHhhccCCCCEEEECcc
Confidence 68999999999999999999998 7888765432221 11 22211111 22222 3333333211136999999886
No 495
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=95.46 E-value=0.32 Score=40.93 Aligned_cols=95 Identities=17% Similarity=0.138 Sum_probs=61.1
Q ss_pred cEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCH--HHH-HHHHHhcCCCeeeecCChhhHHHHHHH-----------
Q 024411 81 ECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSK--DKV-DLLKNKFGFDEAFNYKEEADLNAALKR----------- 144 (268)
Q Consensus 81 ~~vlI~ga~g~~G~~~i~l~~~~g--~~V~~~~~~~--~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~----------- 144 (268)
++|.|+|+||++|..++.+++.+. ++|.+++.+. +.+ +.++ ++.+..+.-.++ .....++.
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~~n~~~L~~q~~-~f~p~~v~i~d~--~~~~~l~~~l~~~~~~~~v 78 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKNVALMVEQIL-EFRPKFVAIDDE--ASLKDLKTMLQQQGSRTEV 78 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHH-HcCCCEEEEcCH--HHHHHHHHHhhcCCCCcEE
Confidence 478999999999999999988653 6888776433 222 3333 677765543332 22222222
Q ss_pred ---------HCCC-CccEEEeCCCh-hhHHhHHHhhhcCCEEEEE
Q 024411 145 ---------YFPE-GIDIYFENVGG-KLLDAVLPNMKIRGRIAAC 178 (268)
Q Consensus 145 ---------~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 178 (268)
.... .+|+++.+.-+ ..+.-.+..++.+-++.+.
T Consensus 79 ~~G~~~l~~l~~~~~~D~vv~AivG~aGL~pt~~Ai~~gk~iaLA 123 (389)
T TIGR00243 79 LVGEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIALA 123 (389)
T ss_pred EECHHHHHHHHcCCCCCEEEEhhhcHhhHHHHHHHHHCCCcEEEe
Confidence 1112 58999987766 7777888888777665544
No 496
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.45 E-value=0.11 Score=36.33 Aligned_cols=90 Identities=18% Similarity=0.179 Sum_probs=51.1
Q ss_pred EEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHH-HHHHHHHhcC----CC-eeeecCChhhHHHHHHHHCCCCccEEE
Q 024411 82 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKD-KVDLLKNKFG----FD-EAFNYKEEADLNAALKRYFPEGIDIYF 154 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g-~~V~~~~~~~~-~~~~~~~~~g----~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~ 154 (268)
+|.|.||+|-+|..+++++..+- +++..+..+.. .-..+.+.++ .. ..+..... ..+ ..+|++|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~Dvvf 71 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADP----EEL-----SDVDVVF 71 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSG----HHH-----TTESEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecch----hHh-----hcCCEEE
Confidence 58899999999999999998754 46555543433 2222221222 11 11211111 111 3599999
Q ss_pred eCCChhhHHhHHHh-hhcCCEEEEEcc
Q 024411 155 ENVGGKLLDAVLPN-MKIRGRIAACGM 180 (268)
Q Consensus 155 d~~g~~~~~~~~~~-l~~~G~~v~~g~ 180 (268)
.|++.......... ++.+-+++..+.
T Consensus 72 ~a~~~~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 72 LALPHGASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp E-SCHHHHHHHHHHHHHTTSEEEESSS
T ss_pred ecCchhHHHHHHHHHhhCCcEEEeCCH
Confidence 99998655555544 455666766644
No 497
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=95.43 E-value=0.11 Score=43.60 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=30.9
Q ss_pred EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHH
Q 024411 82 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVD 118 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~-g~~V~~~~~~~~~~~ 118 (268)
+|||+||+|-+|..+++.+... |.+|++++++..+..
T Consensus 3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~ 40 (347)
T PRK11908 3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG 40 (347)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH
Confidence 6999999999999999888765 689999998765443
No 498
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.43 E-value=0.087 Score=43.97 Aligned_cols=38 Identities=11% Similarity=0.124 Sum_probs=32.8
Q ss_pred CCcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 024411 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 116 (268)
Q Consensus 79 ~~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~ 116 (268)
.+.+|||+||+|.+|..++..+...|++|++++++...
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~ 45 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN 45 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 36789999999999999999999999999888766543
No 499
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.41 E-value=0.22 Score=39.04 Aligned_cols=80 Identities=18% Similarity=0.160 Sum_probs=57.0
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhcCCCeeeecCChhhHHHHHHHHCCCCccEEEeCCChh
Q 024411 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK-NKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGK 160 (268)
Q Consensus 82 ~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 160 (268)
.++|.|+ |-+|..+++.+...|.+|+++++++++..... ++++. +++..+. .-.+.+++..-..+|.++-++|..
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~--t~~~~L~~agi~~aD~vva~t~~d 77 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDA--TDEDVLEEAGIDDADAVVAATGND 77 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecC--CCHHHHHhcCCCcCCEEEEeeCCC
Confidence 5788998 99999999999999999999999998877743 12433 4444443 223455555334899999999974
Q ss_pred hHHhH
Q 024411 161 LLDAV 165 (268)
Q Consensus 161 ~~~~~ 165 (268)
.....
T Consensus 78 ~~N~i 82 (225)
T COG0569 78 EVNSV 82 (225)
T ss_pred HHHHH
Confidence 44333
No 500
>PLN02240 UDP-glucose 4-epimerase
Probab=95.40 E-value=0.11 Score=43.52 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=30.4
Q ss_pred CcEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024411 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 113 (268)
Q Consensus 80 ~~~vlI~ga~g~~G~~~i~l~~~~g~~V~~~~~~ 113 (268)
+++|+|+||+|.+|..+++.+...|.+|+++++.
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999998899999998753
Done!