BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024413
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54C25|GPN1_DICDI GPN-loop GTPase 1 homolog OS=Dictyostelium discoideum GN=xab1 PE=3
SV=1
Length = 396
Score = 284 bits (727), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 123/184 (66%), Positives = 154/184 (83%)
Query: 68 KPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYK 127
+P+ IIV+GMAGSGKTT + R+ H I GY++NLDPAV LP+ NIDIRDT+ YK
Sbjct: 33 QPINIIVLGMAGSGKTTLLQRIRAHLYENKIPGYIINLDPAVSKLPYTPNIDIRDTVNYK 92
Query: 128 EVMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGA 187
EVMKQFNLGPNGGI+TSLNLF+TKFD+V+ ++E+R+ LDY+++DTPGQIE+FTWSASG
Sbjct: 93 EVMKQFNLGPNGGIVTSLNLFSTKFDKVLEIVEKRSSSLDYIILDTPGQIEVFTWSASGT 152
Query: 188 IITEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHE 247
IITE AS+FPTV+ YVVDTPR+ +P TFMSNMLYACSI+YK++LP+V+AFNK D+ H
Sbjct: 153 IITELMASSFPTVLVYVVDTPRTVDPTTFMSNMLYACSIMYKSKLPMVVAFNKIDITNHR 212
Query: 248 FALE 251
FA E
Sbjct: 213 FAEE 216
>sp|Q9HCN4|GPN1_HUMAN GPN-loop GTPase 1 OS=Homo sapiens GN=GPN1 PE=1 SV=1
Length = 374
Score = 276 bits (705), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 151/185 (81%)
Query: 67 RKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRY 126
R PV ++V+GMAGSGKTTF+ RL H ++ YV+NLDPAV +PF ANIDIRDT++Y
Sbjct: 17 RHPVCLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKY 76
Query: 127 KEVMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASG 186
KEVMKQ+ LGPNGGI+TSLNLF T+FD+V+ IE+ + YVL+DTPGQIE+FTWSASG
Sbjct: 77 KEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASG 136
Query: 187 AIITEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQH 246
IITEA AS+FPTVV YV+DT RS NP+TFMSNMLYACSILYKT+LP ++ NKTD+ H
Sbjct: 137 TIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDH 196
Query: 247 EFALE 251
FA+E
Sbjct: 197 SFAVE 201
>sp|Q8VCE2|GPN1_MOUSE GPN-loop GTPase 1 OS=Mus musculus GN=Gpn1 PE=1 SV=1
Length = 372
Score = 274 bits (701), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 123/185 (66%), Positives = 151/185 (81%)
Query: 67 RKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRY 126
+ PV ++V+GMAGSGKTTF+ RL H ++ YV+NLDPAV +PF ANIDIRDT++Y
Sbjct: 17 QPPVCLLVLGMAGSGKTTFVQRLTGHLHNKGCPPYVINLDPAVHEVPFPANIDIRDTVKY 76
Query: 127 KEVMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASG 186
KEVMKQ+ LGPNGGI+TSLNLF T+FD+V+ IE+ + YVL+DTPGQIE+FTWSASG
Sbjct: 77 KEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNTFRYVLIDTPGQIEVFTWSASG 136
Query: 187 AIITEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQH 246
IITEA AS+FPTVV YV+DT RS NP+TFMSNMLYACSILYKT+LP ++ NKTD+ H
Sbjct: 137 TIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDH 196
Query: 247 EFALE 251
FA+E
Sbjct: 197 SFAVE 201
>sp|A4FUD1|GPN1_BOVIN GPN-loop GTPase 1 OS=Bos taurus GN=GPN1 PE=2 SV=1
Length = 373
Score = 273 bits (698), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 150/185 (81%)
Query: 67 RKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRY 126
R P ++V+GMAGSGKTTF+ RL + S+ YV+NLDPAV +PF ANIDIRDT++Y
Sbjct: 17 RPPACLLVLGMAGSGKTTFVQRLTGYLHSQGCPPYVINLDPAVHEVPFPANIDIRDTVKY 76
Query: 127 KEVMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASG 186
KEVMKQ+ LGPNGGI+TSLNLF T+FD+V+ IE+ + YVL+DTPGQIE+FTWSASG
Sbjct: 77 KEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASG 136
Query: 187 AIITEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQH 246
IITEA AS+FPT+V YV+DT RS NP+TFMSNMLYACSILYKT+LP ++ NKTD+ H
Sbjct: 137 TIITEALASSFPTIVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDH 196
Query: 247 EFALE 251
FA+E
Sbjct: 197 SFAVE 201
>sp|O42906|NPA3_SCHPO GTPase npa3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=npa3 PE=1 SV=1
Length = 367
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 151/184 (82%)
Query: 66 KRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIR 125
++KP IIVVGMAGSGKTTFM +L H S+N Y++NLDPAV LP+ ANIDIRDTI
Sbjct: 5 EKKPCAIIVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEANIDIRDTIN 64
Query: 126 YKEVMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSAS 185
YKEVMKQ+NLGPNGGI+TSLNLF TKFD+V+ ++E+RA +D++L+DTPGQIEIF WSAS
Sbjct: 65 YKEVMKQYNLGPNGGIMTSLNLFVTKFDQVLKILEKRAPTVDHILIDTPGQIEIFQWSAS 124
Query: 186 GAIITEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQ 245
G+II + AS++PT + YVVDTPR+ + T+MS+MLYACS+LYK +LPL++ +NK DV
Sbjct: 125 GSIICDTLASSWPTCIAYVVDTPRATSTSTWMSSMLYACSMLYKAKLPLIIVYNKCDVQD 184
Query: 246 HEFA 249
EFA
Sbjct: 185 SEFA 188
>sp|P47122|NPA3_YEAST GTPase NPA3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=NPA3 PE=1 SV=1
Length = 385
Score = 267 bits (682), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 149/180 (82%)
Query: 72 IIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMK 131
II +GMAGSGKTTFM RL H ++ YV+NLDPAV+ +P+ ANIDIRD+I+YK+VM+
Sbjct: 6 IICIGMAGSGKTTFMQRLNSHLRAEKTPPYVINLDPAVLRVPYGANIDIRDSIKYKKVME 65
Query: 132 QFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIITE 191
+ LGPNG I+TSLNLF+TK D+VI L+E++ D ++DTPGQIE F WSASGAIITE
Sbjct: 66 NYQLGPNGAIVTSLNLFSTKIDQVIRLVEQKKDKFQNCIIDTPGQIECFVWSASGAIITE 125
Query: 192 AFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALE 251
+FAS+FPTV+ Y+VDTPR+++P TFMSNMLYACSILYKT+LP+++ FNKTDV + +FA E
Sbjct: 126 SFASSFPTVIAYIVDTPRNSSPTTFMSNMLYACSILYKTKLPMIVVFNKTDVCKADFAKE 185
>sp|P46577|GPN1_CAEEL GPN-loop GTPase 1 homolog OS=Caenorhabditis elegans GN=gop-2 PE=1
SV=1
Length = 355
Score = 248 bits (633), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 153/209 (73%), Gaps = 2/209 (0%)
Query: 52 ESSSGLAGSSSINFKRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMT 111
E+S + + N +KP I+ V+GMAGSGKTTF+ RL +R YV+NLDPAV
Sbjct: 14 EASEEPSPQTGPNVNQKPSIL-VLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSK 72
Query: 112 LPFAANIDIRDTIRYKEVMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLV 171
+P+ N+DIRDT++YKEVMK+F +GPNG I+T LNL T+FD+VI LI +R+ L+
Sbjct: 73 VPYPVNVDIRDTVKYKEVMKEFGMGPNGAIMTCLNLMCTRFDKVIELINKRSSDFSVCLL 132
Query: 172 DTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTR 231
DTPGQIE FTWSASG+IIT++ AS+ PTVV Y+VD+ R+ NP TFMSNMLYACSILY+T+
Sbjct: 133 DTPGQIEAFTWSASGSIITDSLASSHPTVVMYIVDSARATNPTTFMSNMLYACSILYRTK 192
Query: 232 LPLVLAFNKTDVAQHEFALE-VQFFSMLD 259
LP ++ FNK D+ + FAL+ +Q F D
Sbjct: 193 LPFIVVFNKADIVKPTFALKWMQDFERFD 221
>sp|Q6CQA6|GPN3_KLULA GPN-loop GTPase 3 homolog KLLA0D18557g OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=KLLA0D18557g PE=3 SV=2
Length = 271
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 6/179 (3%)
Query: 70 VIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEV 129
V ++V+G AG+GK+TF + ++ H QS R +++NLDPA + IDIRD I ++V
Sbjct: 4 VGVLVLGPAGAGKSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDV 63
Query: 130 MKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLD-YVLVDTPGQIEIFTWSASGAI 188
M++F LGPNG ++ D L E D+ D Y++ D PGQIE++T
Sbjct: 64 MEEFGLGPNGSLIYCFEYLLNNLD---WLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPT 120
Query: 189 ITEAFAS--TFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQ 245
I + F TY+++ P + F S L A S + LP + +K D+ +
Sbjct: 121 IVRHLQNQLNFNLCATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVK 179
>sp|Q5A0W6|GPN3_CANAL GPN-loop GTPase 3 homolog CaO19.3130/CaO19.10642 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=CaO19.10642
PE=3 SV=2
Length = 273
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 72 IIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMK 131
++V+G AG GK+TF + ++ + QS R +++NLDPA + ID++D I ++VM+
Sbjct: 6 VLVLGPAGVGKSTFCNSMIAYMQSIGRRAHIVNLDPAANPTEYEFTIDVKDLISLQDVME 65
Query: 132 QFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLD-YVLVDTPGQIEIFTWSASGAIIT 190
+ LGPNGG++ D L E D+ D Y++ D PGQIE++T I
Sbjct: 66 EMELGPNGGLVYCFEFLLNNLD---WLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIV 122
Query: 191 EAFAST--FPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEF 248
++ F TY+++ P + F S L A S + LP + +K D+ + E+
Sbjct: 123 RHLQTSLNFNLCATYLLEAPFIIDNSKFFSGALSAMSAMILLELPHINILSKIDLVKDEY 182
Query: 249 A 249
+
Sbjct: 183 S 183
>sp|Q6FSS0|GPN3_CANGA GPN-loop GTPase 3 homolog CAGL0G08294g OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAGL0G08294g PE=3 SV=1
Length = 271
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 6/183 (3%)
Query: 70 VIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEV 129
V ++V+G AG+GK+TF + ++ H Q+ R +++NLDPA + IDIRD I +V
Sbjct: 4 VGLLVLGPAGAGKSTFCNSIISHMQTIGRRAHIVNLDPAAEPSKYEFTIDIRDLISLDDV 63
Query: 130 MKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLD-YVLVDTPGQIEIFTWSASGAI 188
M++ +LGPNG ++ D L E D+ D Y++ D PGQIE++T
Sbjct: 64 MEELDLGPNGALIYCFEYLMKNLD---WLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPN 120
Query: 189 ITEAFAS--TFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQH 246
I F TY+++ P + F S L A S + LP + +K D+ +
Sbjct: 121 IVRHLQGQLNFNLCATYLLEAPFVIDSSKFFSGALSAMSAMILLELPHINVLSKLDMIKD 180
Query: 247 EFA 249
E+
Sbjct: 181 EYG 183
>sp|Q6BI59|GPN3_DEBHA GPN-loop GTPase 3 homolog DEHA2G13222g OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DEHA2G13222g PE=3 SV=2
Length = 274
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
Query: 70 VIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEV 129
V ++ +G AG GK+TF + ++ H QS R +++NLDPA + IDIRD I ++V
Sbjct: 4 VGVLALGPAGVGKSTFCNSIITHMQSIGRRAHIVNLDPAAEPSEYEFTIDIRDLISLQDV 63
Query: 130 MKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLD-YVLVDTPGQIEIFTWSASGAI 188
M++ +LGPNG ++ D L E D D Y++ D PGQIE++T
Sbjct: 64 MEEMDLGPNGALIYCFEFLMNNLD---WLDEEIGDFNDEYLIFDCPGQIELYTHIPVLPT 120
Query: 189 ITEAFAST--FPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQH 246
I ++ F TY+++ P + F S L A S + LP + +K D+ ++
Sbjct: 121 IVRHLQTSLNFNLCATYLLEAPFVIDRSKFFSGALSAMSAMILLELPHINILSKIDLIKN 180
Query: 247 EFA 249
E +
Sbjct: 181 EVS 183
>sp|Q750Q9|GPN3_ASHGO GPN-loop GTPase 3 homolog AGL117C OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AGL117C
PE=3 SV=1
Length = 271
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 70 VIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEV 129
V ++V+G AG+GK+TF + ++ + QS R +++NLDPA + +DIRD I +V
Sbjct: 4 VGVLVLGPAGAGKSTFCNGIISYMQSVGRRAHIVNLDPAAEASEYEFTVDIRDLISLDDV 63
Query: 130 MKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLD-YVLVDTPGQIEIFTWSASGAI 188
M++ +LGPNG ++ D L E D+ D Y++ D PGQIE++T
Sbjct: 64 MEELSLGPNGSLVYCFEYLLENLD---WLDEEIGDYNDEYLIFDCPGQIELYTHIPVLPT 120
Query: 189 ITEAFAS--TFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQH 246
I + F +Y+++ P + F S L A S + LP + +K D+ +
Sbjct: 121 IVRHLQNQLNFNLCASYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINVLSKVDLIKD 180
Query: 247 EFA 249
E++
Sbjct: 181 EYS 183
>sp|Q06543|GPN3_YEAST GPN-loop GTPase 3 homolog YLR243W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YLR243W PE=1 SV=1
Length = 272
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 70 VIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEV 129
V ++V+G AG+GK+TF + ++ H Q+ R +++NLDPA + IDIRD I +V
Sbjct: 4 VGVMVLGPAGAGKSTFCNSIISHMQTVGRRAHIVNLDPAAEATKYEFTIDIRDLISLDDV 63
Query: 130 MKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLD-YVLVDTPGQIEIFTWSASGAI 188
M++ +LGPNG ++ D L E D D Y++ D PGQIE++T
Sbjct: 64 MEEMDLGPNGALIYCFEYLLKNLD---WLDEEIGDFNDEYLIFDCPGQIELYTHIPVLPN 120
Query: 189 ITEAFAS--TFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQ 245
I F TY+++ P + F S L A S + LP + +K D+ +
Sbjct: 121 IVRHLTQQLNFNLCATYLLEAPFVIDSSKFFSGALSAMSAMILLELPHINVLSKLDLIK 179
>sp|Q4V7Z0|GPN3_XENLA GPN-loop GTPase 3 OS=Xenopus laevis GN=gpn3 PE=2 SV=1
Length = 285
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 73 IVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVM-- 130
+V+G AGSGK+T+ +V H ++ N V+NLDPA + DIR+ I +VM
Sbjct: 7 LVMGPAGSGKSTYCSTMVQHCETLNRSVQVVNLDPAAEHFDYPVLADIRELIEVDDVMED 66
Query: 131 KQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIIT 190
+ GPNGG++ + F FD + S + D DY+L D PGQIE++T +
Sbjct: 67 RSLRFGPNGGLVYCMEYFANNFDWLESCLGHTED--DYILFDCPGQIELYTHLPVMKYLV 124
Query: 191 EAFAS-TFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFA 249
E F ++VD+ F+S +L A S + +P K D+ +
Sbjct: 125 EQLQQWEFRVCGVFLVDSQFMVESFKFLSGVLAALSAMVSLEIPQCNIMTKMDLLSKKAK 184
Query: 250 LEVQFFSMLDYY 261
E++ F D Y
Sbjct: 185 KEIEKFLDPDMY 196
>sp|Q0P5E2|GPN3_BOVIN GPN-loop GTPase 3 OS=Bos taurus GN=GPN3 PE=2 SV=1
Length = 284
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 5/192 (2%)
Query: 73 IVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQ 132
+V+G AGSGK+T+ +V H ++ N V+NLDPA ++ DIR+ I +VM+
Sbjct: 7 LVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMED 66
Query: 133 --FNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT-WSASGAII 189
GPNGG++ + F FD + + + D DY+L D PGQIE++T ++
Sbjct: 67 STLQFGPNGGLVFCMEYFANNFDWLENCLGHVED--DYILFDCPGQIELYTHLPVMKQLV 124
Query: 190 TEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFA 249
+ F ++VD+ F+S +L A S + +P V K D+ +
Sbjct: 125 QQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNVMTKMDLLSKKAK 184
Query: 250 LEVQFFSMLDYY 261
E++ F D Y
Sbjct: 185 KEIEKFLDPDMY 196
>sp|Q9UHW5|GPN3_HUMAN GPN-loop GTPase 3 OS=Homo sapiens GN=GPN3 PE=1 SV=2
Length = 284
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Query: 73 IVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQ 132
+V+G AGSGK+T+ +V H ++ N V+NLDPA ++ DIR+ I +VM+
Sbjct: 7 LVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMED 66
Query: 133 FNL--GPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT-WSASGAII 189
+L GPNGG++ + F FD + + + D DY+L D PGQIE++T ++
Sbjct: 67 DSLRFGPNGGLVFCMEYFANNFDWLENCLGHVED--DYILFDCPGQIELYTHLPVMKQLV 124
Query: 190 TEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFA 249
+ F ++VD+ F+S +L A S + +P V K D+ +
Sbjct: 125 QQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAK 184
Query: 250 LEVQFFSMLDYY 261
E++ F D Y
Sbjct: 185 KEIEKFLDPDMY 196
>sp|Q28I42|GPN3_XENTR GPN-loop GTPase 3 OS=Xenopus tropicalis GN=gpn3 PE=2 SV=1
Length = 285
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 73 IVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVM-- 130
+V+G AGSGK+T+ +V H S N V+NLDPA + DIR+ I +VM
Sbjct: 7 LVMGPAGSGKSTYCSTMVQHCGSLNRSVQVVNLDPAAEHFDYPVLADIRELIEVDDVMED 66
Query: 131 KQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIIT 190
+ GPNGG++ + F FD + S + D DY+L D PGQIE++T +
Sbjct: 67 RSLRFGPNGGLVYCMEYFANNFDWLESCLGHTED--DYILFDCPGQIELYTHLPVMKYLV 124
Query: 191 EAFAS-TFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFA 249
E F ++VD+ F+S +L A S + +P K D+ +
Sbjct: 125 EQLQQWEFRVCGVFLVDSQFMVESFKFLSGVLAALSAMVSLEIPQCNIMTKMDLLGKKAK 184
Query: 250 LEVQFFSMLDYY 261
E++ F D Y
Sbjct: 185 KEIEKFLDPDMY 196
>sp|Q6R518|GPN3_RAT GPN-loop GTPase 3 OS=Rattus norvegicus GN=Gpn3 PE=2 SV=1
Length = 284
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 5/192 (2%)
Query: 73 IVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQ 132
+V+G AGSGK+T+ +V H ++ N V+NLDPA + DIR+ I +VM+
Sbjct: 7 LVMGPAGSGKSTYCSTMVQHCEALNRSVQVVNLDPAAEHFNYPVMADIRELIEVDDVMED 66
Query: 133 FNL--GPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT-WSASGAII 189
+L GPNGG++ + F FD + + + D DY+L D PGQIE++T ++
Sbjct: 67 DSLRFGPNGGLVFCMEYFANNFDWLENCLGHVED--DYILFDCPGQIELYTHLPVMKQLV 124
Query: 190 TEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFA 249
+ F ++VD+ F+S +L A S + +P V K D+ +
Sbjct: 125 QQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAK 184
Query: 250 LEVQFFSMLDYY 261
E++ F D Y
Sbjct: 185 KEIEKFLDPDMY 196
>sp|Q9D3W4|GPN3_MOUSE GPN-loop GTPase 3 OS=Mus musculus GN=Gpn3 PE=2 SV=1
Length = 284
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 5/192 (2%)
Query: 73 IVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQ 132
+V+G AGSGK+T+ +V H ++ N V+NLDPA + DIR+ I +VM+
Sbjct: 7 LVMGPAGSGKSTYCSTMVQHCEALNRSVQVVNLDPAAEHFNYPVMADIRELIEVDDVMED 66
Query: 133 FNL--GPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT-WSASGAII 189
+L GPNGG++ + F FD + + + D DY+L D PGQIE++T ++
Sbjct: 67 ESLRFGPNGGLVFCMEYFANNFDWLENCLGHVED--DYILFDCPGQIELYTHLPVMKQLV 124
Query: 190 TEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFA 249
+ F ++VD+ F+S +L A S + +P V K D+ +
Sbjct: 125 QQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMVSLEIPQVNIMTKMDLLSKKAK 184
Query: 250 LEVQFFSMLDYY 261
E++ F D Y
Sbjct: 185 KEIEKFLDPDMY 196
>sp|Q4PF70|GPN3_USTMA GPN-loop GTPase 3 homolog UM01243 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=UM01243 PE=3 SV=1
Length = 281
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 72 IIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMK 131
++V G AGSGK+TF L+ H QS ++ NLDPA + +IDI++ I ++VM+
Sbjct: 6 VLVSGPAGSGKSTFCSALIAHAQSLGRNVHLFNLDPAAERFEYQPSIDIKELISLEDVME 65
Query: 132 QFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIITE 191
+ NLGPNGG++ D + + + D DY+++D PGQIE++T + +
Sbjct: 66 EMNLGPNGGLIYCFEYLLDNLDWLDDELGQFND--DYIIIDCPGQIELYTHFPIMSRLVN 123
Query: 192 AFAST--FPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQ 245
+S F TY++++ + + + +L A S + +P + +K D+ +
Sbjct: 124 ILSSQYHFRICATYLLESQFIDDKTKYFAGVLSAMSAMINLEVPHINLLSKMDLVE 179
>sp|Q54TE7|GPN2_DICDI GPN-loop GTPase 2 homolog OS=Dictyostelium discoideum GN=gpn2 PE=2
SV=1
Length = 315
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 6/199 (3%)
Query: 73 IVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQ 132
+V+G GSGKT + + + QS + ++NLDP+ +P+ ++I++ I ++ V+ +
Sbjct: 6 VVIGPPGSGKTVYCNGMSQFLQSIGRKVSIINLDPSNENIPYEPAVNIQELIDFQTVVNE 65
Query: 133 FNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT-WSASGAIITE 191
+LGPNGG++ + D + + DH Y++ D PGQ+E++T + I+
Sbjct: 66 TDLGPNGGLIFCMEYLEKNLDWLKEKLLPLKDH--YIIFDCPGQVELYTHYKIISNILDN 123
Query: 192 AFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALE 251
+F V V D+ NP F+S +L + S + + LP + +K D+ + L+
Sbjct: 124 IMKWSFRLTVIQVFDSFYCKNPSNFISILLVSLSGMVRIELPHINVLSKMDLIEQNGPLD 183
Query: 252 --VQFFS-MLDYYFCDYYL 267
+ F++ +LD + D +L
Sbjct: 184 FNLDFYTDVLDLKYLDAFL 202
>sp|Q6CBB5|GPN3_YARLI GPN-loop GTPase 3 homolog YALI0C20317g OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=YALI0C20317g PE=3 SV=1
Length = 271
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 70 VIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEV 129
V I+V+G AG GK+TF + L+ H QS R +++NLDPA + +DIRD I +V
Sbjct: 4 VGILVLGPAGVGKSTFCNALITHIQSIGRRAHIVNLDPAAEPNEYEFTVDIRDLISLNDV 63
Query: 130 MKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAII 189
M++ LGPNGG++ D + + +Y++ D PGQIE++T I
Sbjct: 64 MEEMELGPNGGLMYCFEFLLQNMDWLEEELGEFE--DEYLIFDCPGQIELYTHVPVLPTI 121
Query: 190 TEAFAS--TFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHE 247
+ F Y+++ P + F S +L A S + P + +K D+ + E
Sbjct: 122 VKHLQRHMGFSLCACYILEAPFVLDRPKFFSGVLSAMSAMILLETPHINILSKMDLIKDE 181
>sp|P0CN94|GPN3_CRYNJ GPN-loop GTPase 3 homolog CNB04680 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CNB04680 PE=3 SV=1
Length = 287
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 72 IIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMK 131
++V G AG+GK+TF L+ H Q+ +++NLDPA + IDIRD I ++VM+
Sbjct: 5 VLVTGPAGAGKSTFCASLITHAQTIGRSVHLVNLDPAADKFEYEPTIDIRDLINLEDVME 64
Query: 132 QFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIITE 191
+ GPNGG++ D + + D DY+++D PGQIE++T +
Sbjct: 65 ELEFGPNGGLIYCFEYLLNNLDWLEDELGAYED--DYLIIDCPGQIELYTHVPLLPRLA- 121
Query: 192 AFAST---FPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHE 247
F ST F T Y++D+ + F + ++ A S + + ++ +K D+ + +
Sbjct: 122 TFLSTSLNFRTSAVYLIDSQFMQDKSKFFAGVMSAMSCMLSLGISMLCLMSKMDLVKDK 180
>sp|P0CN95|GPN3_CRYNB GPN-loop GTPase 3 homolog CNBB1090 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CNBB1090 PE=3
SV=1
Length = 287
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 72 IIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMK 131
++V G AG+GK+TF L+ H Q+ +++NLDPA + IDIRD I ++VM+
Sbjct: 5 VLVTGPAGAGKSTFCASLITHAQTIGRSVHLVNLDPAADKFEYEPTIDIRDLINLEDVME 64
Query: 132 QFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIITE 191
+ GPNGG++ D + + D DY+++D PGQIE++T +
Sbjct: 65 ELEFGPNGGLIYCFEYLLNNLDWLEDELGAYED--DYLIIDCPGQIELYTHVPLLPRLA- 121
Query: 192 AFAST---FPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHE 247
F ST F T Y++D+ + F + ++ A S + + ++ +K D+ + +
Sbjct: 122 TFLSTSLNFRTSAVYLIDSQFMQDKSKFFAGVMSAMSCMLSLGISMLCLMSKMDLVKDK 180
>sp|Q6ZM63|GPN3_DANRE GPN-loop GTPase 3 OS=Danio rerio GN=gpn3 PE=2 SV=2
Length = 285
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 73 IVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQ 132
+V+G AGSGK+T+ ++ H Q+ N V+NLDPA + DIR+ I+ +VM+
Sbjct: 7 LVMGPAGSGKSTYCATMLEHCQALNRSVQVVNLDPAAEHFEYPVIADIRELIQVDDVMED 66
Query: 133 FNL--GPNGGILTSLNLFTTKFDEVISLIERRADHL--DYVLVDTPGQIEIFTWSASGAI 188
+L GPNGG++ + F+ FD +E H+ DY+L D PGQIE++T
Sbjct: 67 DSLRFGPNGGLIFCMEYFSNNFD----WLEESLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 189 ITEAFAS-TFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHE 247
+ E F ++VD+ F+S ++ A S + +P V K D+ +
Sbjct: 123 LVEQLQQWEFRVCGVFLVDSQFMVETFKFISGVMAALSAMVMLEIPQVNIMTKMDLLSPK 182
Query: 248 FALEVQFFSMLDYY 261
E++ + D Y
Sbjct: 183 AKKEIEKYLDPDMY 196
>sp|Q6PUR6|GPN2_DANRE GPN-loop GTPase 2 OS=Danio rerio GN=gpn2 PE=2 SV=1
Length = 311
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 5/187 (2%)
Query: 73 IVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQ 132
+V+G GSGKTT+ + + ++NLDPA LP+ +DI + + +VM
Sbjct: 14 VVIGPPGSGKTTYCRGMQEFLSRLGRKVVIVNLDPANEGLPYPCAVDIAELVTLDDVMDG 73
Query: 133 FNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSAS-GAIITE 191
LGPNGG++ S+ D + + ++ D Y L D PGQ+E++T S I +
Sbjct: 74 LKLGPNGGLIYSMEYLEANLDWLENKLKLHHDC--YFLFDCPGQVELYTHHNSVKNIFAQ 131
Query: 192 AFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQH--EFA 249
F ++VD+ A+P F+S + + S + LP V +K D+ + + A
Sbjct: 132 LSKWNFRLTAVHLVDSHYCADPAKFISVLCTSLSTMLHVELPHVNVLSKMDLIEQYGKLA 191
Query: 250 LEVQFFS 256
+ F++
Sbjct: 192 FNLDFYT 198
>sp|D4A7C0|GPN2_RAT GPN-loop GTPase 2 OS=Rattus norvegicus GN=Gpn2 PE=3 SV=1
Length = 310
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 74 VVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQF 133
V+G GSGKTT+ + ++ R V+NLDPA LP+ +D+ + + +VM
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMDAL 73
Query: 134 NLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSAS-GAIITEA 192
LGPNGG+L + D + + +E H Y L D PGQ+E+ T S +I ++
Sbjct: 74 RLGPNGGLLYCMEYLEANLDWLRAKLEPLRGH--YFLFDCPGQVELCTHHTSLRSIFSQM 131
Query: 193 FASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEV 252
++VD+ +P F+S + + + + LP V +K D+ +H L
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHVNLLSKMDLIEHYGKLAF 191
Query: 253 QFFSMLDYY 261
LDYY
Sbjct: 192 N----LDYY 196
>sp|Q58DD9|GPN2_PIG GPN-loop GTPase 2 OS=Sus scrofa GN=GPN2 PE=2 SV=1
Length = 310
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 74 VVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQF 133
V+G GSGKTT+ + ++ R V+NLDPA LP+ +D+ + + +VM +
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLSDVMDEL 73
Query: 134 NLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT-WSASGAIITEA 192
LGPNGG+L + D + + ++ H Y L D PGQ+E+ T A +I ++
Sbjct: 74 QLGPNGGLLYCMEYLEANLDWLRAKLDPLRGH--YFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 193 FASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEV 252
++VD+ +P F+S + + + + LP V +K D+ +H L
Sbjct: 132 TQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHVNLLSKMDLIEHYGKLAF 191
Query: 253 QFFSMLDYY 261
LDYY
Sbjct: 192 N----LDYY 196
>sp|Q08726|GPN2_YEAST GPN-loop GTPase 2 homolog OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YOR262W PE=1 SV=1
Length = 347
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 69 PVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKE 128
P IV+G GSGK+T+ + + V+N+DPA LP+ +DIRD I +E
Sbjct: 2 PFAQIVIGPPGSGKSTYCNGCSQFFNAIGRHSQVVNMDPANDALPYPCAVDIRDFITLEE 61
Query: 129 VMKQFNLGPNGGILTSLNLFTTKFD----EVISLIERRADHLDYVLVDTPGQIEIFTWSA 184
+M++ LGPNGG++ ++ D ++ SL+E Y++ D PGQ+E+FT +
Sbjct: 62 IMQEQQLGPNGGLMYAVESLDNSIDLFILQIKSLVEEEKA---YLVFDCPGQVELFTHHS 118
Query: 185 SGAIITEAFASTFPT--VVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTD 242
S I + V ++D +P ++S +L A + LP + F+K D
Sbjct: 119 SLFNIFKKMEKELDIRFCVVNLIDCFYMTSPSQYISILLLALRSMLMMDLPHINVFSKID 178
Query: 243 VAQHEFALEVQFFSMLDYY 261
+ + L + LDYY
Sbjct: 179 MLKSYGELPFR----LDYY 193
>sp|Q8VEJ1|GPN2_MOUSE GPN-loop GTPase 2 OS=Mus musculus GN=Gpn2 PE=2 SV=2
Length = 310
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 74 VVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQF 133
V+G GSGKTT+ + ++ R V+NLDPA LP+ +D+ + + +VM
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANDGLPYECAVDVGELVGLGDVMDAL 73
Query: 134 NLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT-WSASGAIITEA 192
LGPNGG+L + D + + +E H Y L D PGQ+E+ T +A +I ++
Sbjct: 74 RLGPNGGLLYCMEYLEANLDWLRAKLEPLRGH--YFLFDCPGQVELCTHHTALRSIFSQM 131
Query: 193 FASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEV 252
++VD+ +P F+S + + + + LP + +K D+ +H L
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAF 191
Query: 253 QFFSMLDYY 261
LDYY
Sbjct: 192 N----LDYY 196
>sp|A6H7F2|GPN2_BOVIN GPN-loop GTPase 2 OS=Bos taurus GN=GPN2 PE=2 SV=1
Length = 310
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 74 VVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQF 133
V+G GSGKTT+ + ++ R V+NLDPA LP+ +D+ + + +VM
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMDAL 73
Query: 134 NLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT-WSASGAIITEA 192
LGPNGG+L + D + + ++ H Y L D PGQ+E+ T A +I ++
Sbjct: 74 QLGPNGGLLYCMEYLEANLDWLRAKLDPLRGH--YFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 193 FASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEV 252
++VD+ +P F+S + + + + LP V +K D+ +H L
Sbjct: 132 TQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHVNLLSKMDLIEHYGKLAF 191
Query: 253 QFFSMLDYY 261
LDYY
Sbjct: 192 N----LDYY 196
>sp|Q4R579|GPN2_MACFA GPN-loop GTPase 2 OS=Macaca fascicularis GN=GPN2 PE=2 SV=1
Length = 310
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 74 VVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQF 133
V+G GSGKTT+ + ++ R V+NLDPA LP+ +D+ + + +VM
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMDAL 73
Query: 134 NLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT-WSASGAIITEA 192
LGPNGG+L + D + + ++ H Y L D PGQ+E+ T A +I ++
Sbjct: 74 RLGPNGGLLYCMEYLEANLDWLRAKLDPLRGH--YFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 193 FASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEV 252
++VD+ +P F+S + + + + LP + +K D+ +H L
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAF 191
Query: 253 QFFSMLDYY 261
LDYY
Sbjct: 192 N----LDYY 196
>sp|Q9H9Y4|GPN2_HUMAN GPN-loop GTPase 2 OS=Homo sapiens GN=GPN2 PE=2 SV=2
Length = 310
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 74 VVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQF 133
V+G GSGKTT+ + ++ R V+NLDPA LP+ +D+ + + +VM
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMDAL 73
Query: 134 NLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT-WSASGAIITEA 192
LGPNGG+L + D + + ++ H Y L D PGQ+E+ T A +I ++
Sbjct: 74 RLGPNGGLLYCMEYLEANLDWLRAKLDPLRGH--YFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 193 FASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEV 252
++VD+ +P F+S + + + + LP + +K D+ +H L
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAF 191
Query: 253 QFFSMLDYY 261
LDYY
Sbjct: 192 N----LDYY 196
>sp|Q54NK8|GPN3_DICDI GPN-loop GTPase 3 homolog OS=Dictyostelium discoideum GN=gpn3 PE=3
SV=1
Length = 285
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 73 IVVGMAGSGKTTFMH--RLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVM 130
+V+G AGSGK+T+ R C R++ +++NLDPA + ++DI++ + EVM
Sbjct: 7 LVMGPAGSGKSTYCDTMRKYCEEIKRSV--HIVNLDPAAEVFEYPVSVDIKNLVTVDEVM 64
Query: 131 KQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIIT 190
+ + GPNGG++ ++ D + + D DY+++D PGQIE+++ I+
Sbjct: 65 DELHYGPNGGLVYAMEYLIENMDWLTDELGDYED--DYLIIDCPGQIELYSHIPVMRILV 122
Query: 191 EAFASTFPTVVT-YVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQ 245
+ +V + ++VD+ + F+S L S + + +P + K DV +
Sbjct: 123 DHLQQIGYSVCSVFLVDSQFILDNCKFISGALMCLSAMVRLEVPHINVLTKIDVLK 178
>sp|Q4WT40|GPN3_ASPFU GPN-loop GTPase 3 homolog AFUA_1G10640 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=AFUA_1G10640 PE=3 SV=1
Length = 293
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 72 IIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMK 131
++V+G AG+GK+TF L+ H Q+ + +NLDPA + + ++DIR+ I ++VM+
Sbjct: 6 VLVMGPAGAGKSTFCSALIQHLQTTRRSCFYVNLDPAAESFNYEPDLDIRELITLEDVME 65
Query: 132 QFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIITE 191
+ LGPNGG++ D + ++ ++ ++ D PGQIE++T + +
Sbjct: 66 EMELGPNGGLIYCFEFLLQNLDFLSQALDPLSEEY-LIIFDMPGQIELYTHIPLLPSLVQ 124
Query: 192 AFASTFP----TVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTD 242
+ P Y++++ + F + L A S + +P V +K D
Sbjct: 125 YLSRQGPLNINLCAAYLLESTFVIDKAKFFAGTLSAMSAMLMLEMPHVNILSKMD 179
>sp|Q4IQT8|GPN3_GIBZE GPN-loop GTPase 3 homolog FG00420 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FGSG_00420
PE=3 SV=1
Length = 301
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 73 IVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQ 132
+V+G AG+GK+TF L+ H + +NLDPA + ++DI++ I K+ M++
Sbjct: 7 MVMGPAGAGKSTFCAALITHLNLNRRSAFYINLDPAAESFEHEPDLDIKELISLKDAMEE 66
Query: 133 FNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFT----------- 181
LGPNGG++ D + +E + +++D PGQIE++T
Sbjct: 67 VGLGPNGGLIYCFEFLMENLDWLTDALEGLTEEY-LIIIDMPGQIELYTHVPILPALVKF 125
Query: 182 WSASGAIITEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKT 241
S G++ A+ + T+VVD + F S L A S + +P + +K
Sbjct: 126 LSQPGSLDVR-MAAVYLLEATFVVDRAK------FFSGTLSAMSAMLMLEVPHINILSKM 178
Query: 242 DVAQ 245
D+ +
Sbjct: 179 DLVK 182
>sp|O14443|GPN3_SCHPO GPN-loop GTPase 3 homolog fet5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fet5 PE=2 SV=1
Length = 276
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 70 VIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEV 129
V V G+A SGK+TF L+ + +S +++NLDPA + +DIRD I +V
Sbjct: 4 VAAFVCGVASSGKSTFCGALMSYMKSVGRSCHLVNLDPAAENFEWEPTVDIRDLISIDDV 63
Query: 130 MKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADH-LDYVLVDTPGQIEIFTWSASGAI 188
M++ + GPNGG++ D L E D+ DY++ D PGQIE++T
Sbjct: 64 MEELDYGPNGGLIYCFEFLMENLD---WLNEEIGDYDEDYLIFDMPGQIELYTHVPILPA 120
Query: 189 ITEAFAST--FPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQ 245
+ T F Y++++ + F + +L A S + +P + +K D+ +
Sbjct: 121 LIRHLQVTLNFRPCAVYLLESQFLVDRTKFFAGVLSAMSAMVMMEVPHINLLSKMDLLK 179
>sp|Q9UTL7|GPN2_SCHPO GPN-loop GTPase 2 homolog OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC144.07c PE=3 SV=1
Length = 315
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 69 PVIIIVVGMAGSGKTTF---MHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIR 125
P +VVG GSGK+T+ M++L+ +I ++NLDPA + + IDIR +
Sbjct: 2 PFCQVVVGPPGSGKSTYCFGMYQLLSAIGRSSI---IVNLDPANDFIKYPCAIDIRKVLD 58
Query: 126 YKEVMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSAS 185
+ + K ++LGPNG ++ ++ + ++ +++ D YV+ D PGQ+E+FT S
Sbjct: 59 VEMIQKDYDLGPNGALIYAMEAIEYHVEWLLKELKKHRDS--YVIFDCPGQVELFTNHNS 116
Query: 186 GAIITEAFAST--FPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDV 243
I + + V +VD NP ++S +L + + +P V +K D+
Sbjct: 117 LQKIIKTLEKELDYRPVSVQLVDAYCCTNPSAYVSALLVCLKGMLQLDMPHVNILSKADL 176
Query: 244 --------AQHEFALEVQFFSML 258
+ +F EVQ S L
Sbjct: 177 LCTYGTLPMKLDFFTEVQDLSYL 199
>sp|Q5BJ53|GPN2_XENTR GPN-loop GTPase 2 OS=Xenopus tropicalis GN=gpn2 PE=2 SV=1
Length = 303
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 74 VVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQF 133
V+G GSGK+T++ + + ++NLDPA P AA + +R+ + +EVM +
Sbjct: 24 VIGPPGSGKSTYVRAMQALLAQMGRKSAIINLDPAGEDEPGAA-VSLRELLGLEEVMSEL 82
Query: 134 NLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWS-ASGAIITEA 192
LGPNG +L + D + ++ Y L+D PGQ+E++T A ++
Sbjct: 83 RLGPNGALLYCMEYLQENLDWLRGRLQGLRG--TYFLLDCPGQVELYTHHPALPDVLRRL 140
Query: 193 FASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEV 252
A ++VD+ +P F+S + + S + LP + +K D+ + L
Sbjct: 141 GAWGLRLCAVHLVDSHYCTDPAKFISVLCTSLSTMLHVELPHINVLSKMDLIEQYGRLAF 200
Query: 253 QFFSMLDYY 261
LDYY
Sbjct: 201 N----LDYY 205
>sp|Q66KF6|GPN2_XENLA GPN-loop GTPase 2 OS=Xenopus laevis GN=gpn2 PE=2 SV=1
Length = 318
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 74 VVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQF 133
V+G GSGK+T++ + + ++NLDPA P AA + +R+ + +EVM +
Sbjct: 24 VIGPPGSGKSTYVRAMQALLARMGRKSAIINLDPAGEDEPGAA-VSLRELLGLEEVMSEL 82
Query: 134 NLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWS-ASGAIITEA 192
LGPNG +L + D + + ++ Y+L+D PGQ+E++T A I+
Sbjct: 83 RLGPNGSLLYCMEYLQENLDWLRARLQGLRG--TYLLLDCPGQVELYTHHPALPDILRRL 140
Query: 193 FASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEV 252
++VD+ +P F+S + + S + LP + +K D+ + L
Sbjct: 141 GGWGLRLCAVHLVDSHYCTDPAKFISVLCTSLSTMLHVELPHINVLSKMDLIEQYGRLAF 200
Query: 253 QFFSMLDYY 261
LDYY
Sbjct: 201 N----LDYY 205
>sp|P53729|YN8H_YEAST Uncharacterized protein YNR029C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YNR029C PE=1 SV=1
Length = 429
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 16/122 (13%)
Query: 58 AGSSSINFKRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAAN 117
AG++ ++ K++ + I+ G GSGK+T + ++ + I AV+ F +
Sbjct: 60 AGATDVHEKKRIPVSIITGYLGSGKSTLLEKIALKGADKKI---------AVILNEFGDS 110
Query: 118 IDIRDTIRYKE----VMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDT 173
+I + K + +LG NG + SL K E ++ER +DY+L++T
Sbjct: 111 SEIEKAMTIKNGSNSYQEWLDLG-NGCLCCSLKNIGVKAIE--DMVERSPGKIDYILLET 167
Query: 174 PG 175
G
Sbjct: 168 SG 169
>sp|Q9V1E8|SRP54_PYRAB Signal recognition particle 54 kDa protein OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=srp54 PE=3 SV=1
Length = 443
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 60 SSSINFKRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRN 97
+ I K KP I+++VG+ GSGKTT + +L H Q R
Sbjct: 91 AKPIEIKEKPTILLMVGVQGSGKTTTVAKLARHFQKRG 128
>sp|C5A233|SRP54_THEGJ Signal recognition particle 54 kDa protein OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=srp54 PE=3 SV=1
Length = 448
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 63 INFKRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNL 105
+ + KP I++ VG+ GSGKTT + +L H Q RGY + L
Sbjct: 94 LEIREKPTILLTVGIQGSGKTTTIAKLARHLQK---RGYKVGL 133
>sp|Q54431|SRP54_STRMU Signal recognition particle protein OS=Streptococcus mutans
serotype c (strain ATCC 700610 / UA159) GN=ffh PE=3 SV=3
Length = 516
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 50 IEESSSGLAGSSSINFKRK---PVIIIVVGMAGSGKTTFMHRLVCH-TQSRNIRGYVMNL 105
+ E + + GS + ++ P II++VG+ G+GKTTF +L + N R ++
Sbjct: 79 VNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEENARPLMIAA 138
Query: 106 DPAVMTLPFAANIDIRDTIRYKEVMKQFNLGPNGGILTSLNLFTTKFDEVIS--LIERRA 163
D + A ID T+ + + F++G + E++S L + +
Sbjct: 139 D-----IYRPAAIDQLKTLGQQINVPVFDMGTEHSAV-----------EIVSQGLAQAKE 182
Query: 164 DHLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDT 207
+ DYVL+DT G+++I + +A A+ P + VVD+
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALAN--PNEILLVVDS 224
>sp|P37105|SRP54_BACSU Signal recognition particle protein OS=Bacillus subtilis (strain
168) GN=ffh PE=1 SV=1
Length = 446
Score = 38.9 bits (89), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 27/144 (18%)
Query: 38 KEEITESMDKLHIEESSSGLAGSSSINFKRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRN 97
+EE+TE M EES +A KR P +I++VG+ G+GKTT +L + ++
Sbjct: 80 QEELTELMGG---EESKIAVA-------KRPPTVIMMVGLQGAGKTTTSGKLANLLRKKH 129
Query: 98 IRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVM-KQFNLGPNGGILTSLNLFTTKFDEVI 156
R ++ AA+I I+ E + KQ ++ P + SL + +
Sbjct: 130 NRKPML----------VAADIYRPAAIKQLETLGKQLDM-P----VFSLGDQVSPVEIAK 174
Query: 157 SLIER-RADHLDYVLVDTPGQIEI 179
IE+ + +H DYV++DT G++ I
Sbjct: 175 QAIEKAKEEHYDYVILDTAGRLHI 198
>sp|P21565|SRP54_SCHPO Signal recognition particle 54 kDa protein homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=srp54 PE=1 SV=1
Length = 522
Score = 38.1 bits (87), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 66 KRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLD 106
K +P +I++VG+ GSGKTT +L H Q R ++ ++ D
Sbjct: 98 KGRPSVIMMVGLQGSGKTTTCSKLALHYQRRGLKSCLVAAD 138
>sp|Q1I2K4|CYSC_PSEE4 Adenylyl-sulfate kinase OS=Pseudomonas entomophila (strain L48)
GN=cysC PE=3 SV=1
Length = 208
Score = 37.7 bits (86), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 23/138 (16%)
Query: 45 MDKLHIEESSSGLAGSSSINFKRKPVIIIVVGMAGSGKTT-------FMHRLVCHTQSRN 97
M LH ++ +N R P I G++GSGK+T ++HR CHT
Sbjct: 1 MKDLHWHGHATSRLARVEMNGHR-PCTIWFTGLSGSGKSTIANALDGWLHRRGCHT---- 55
Query: 98 IRGYVMNLDPAVMT----LPFAANIDIRDTIRYKEVMKQFNLGPNGGILTSLNLFTTKFD 153
YV++ D L F+ + + R EV K FN + G++ S F + ++
Sbjct: 56 ---YVLDGDNVRQGLNKDLGFSEQDRVENIRRVGEVAKLFN---DAGLIVSC-AFISPYE 108
Query: 154 EVISLIERRADHLDYVLV 171
+ L+ + + +YV V
Sbjct: 109 KDRHLVRQLLNEDEYVEV 126
>sp|B6YSS1|SRP54_THEON Signal recognition particle 54 kDa protein OS=Thermococcus
onnurineus (strain NA1) GN=srp54 PE=3 SV=1
Length = 448
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 60 SSSINFKRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNL 105
+ I K KP +++ VG+ GSGKTT + +L + Q RGY + L
Sbjct: 91 AKPIEIKEKPTVLLTVGIQGSGKTTSIAKLARYFQK---RGYKVGL 133
>sp|Q8U070|SRP54_PYRFU Signal recognition particle 54 kDa protein OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=srp54
PE=1 SV=1
Length = 443
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 60 SSSINFKRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRN 97
+ I K KP I+++VG+ GSGKTT + +L + Q R
Sbjct: 91 AKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRG 128
>sp|Q5JJC8|SRP54_PYRKO Signal recognition particle 54 kDa protein OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=srp54 PE=3 SV=1
Length = 448
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 60 SSSINFKRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIR 99
+ + K KP +I+ VG+ GSGKTT + +L + Q R +
Sbjct: 91 AKPLEIKHKPTVILTVGIQGSGKTTSVAKLARYLQKRGYK 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,138,152
Number of Sequences: 539616
Number of extensions: 3678677
Number of successful extensions: 20130
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 19968
Number of HSP's gapped (non-prelim): 159
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)