BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024416
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8SUH6|ZA15_ENCCU Zinc finger C2H2 protein ECU10_0150 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU10_0150 PE=4 SV=1
Length = 388
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 97 VDINEWRCGYCKKSFRAEKFLDQHFDNRHNN 127
V+ N ++CG+C K+F +EKF+ HF+N+H N
Sbjct: 294 VNENHYKCGFCGKAFESEKFIFNHFNNKHEN 324
>sp|Q5T0B9|ZN362_HUMAN Zinc finger protein 362 OS=Homo sapiens GN=ZNF362 PE=1 SV=1
Length = 420
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 94 KIHVDINEWRCGYCKKSFRAEKFLDQH 120
+IH+ + + C YC KSFR L QH
Sbjct: 275 RIHLGVKPYHCSYCDKSFRQLSHLQQH 301
>sp|P39533|ACON2_YEAST Probable aconitate hydratase 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ACO2 PE=1 SV=1
Length = 789
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 143 ALHCDFVMNSKSSRSKCNPAAVAKNRHL---CESLANRCFPINQGPSASRLHELFLRQFC 199
++HCD ++ K +K P+++A N+ + ES A R GP + +H++ L F
Sbjct: 120 SIHCDHLIVGKDGETKDLPSSIATNQEVFDFLESCAKRYGIQFWGPGSGIIHQIVLENFS 179
>sp|P51786|ZN157_HUMAN Zinc finger protein 157 OS=Homo sapiens GN=ZNF157 PE=2 SV=2
Length = 506
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 91 EQHKIHVDINEWRCGYCKKSFRAEKFLDQH 120
+ H+ H + CG C K+FRA+K L+QH
Sbjct: 291 QHHRTHTGEKPYECGECGKNFRAKKSLNQH 320
>sp|Q8SW43|Z379_ENCCU Zinc finger C2H2 protein ECU03_0790 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU03_0790 PE=4 SV=1
Length = 190
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 93 HKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMNS 152
HK E++CG C K +R + D H ++ H + N K + + +C F N
Sbjct: 76 HKHQKACLEYKCGICGKRYRKRSWFDVHVESHHVKVFNAPRSKHVCE-----YCKFEFNK 130
Query: 153 KSSRS 157
KS+ S
Sbjct: 131 KSNLS 135
>sp|P20385|CF2_DROME Chorion transcription factor Cf2 OS=Drosophila melanogaster GN=Cf2
PE=2 SV=3
Length = 510
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 91 EQH-KIHVDINEWRCGYCKKSFRAEKFLDQHF 121
+QH +IH +RCGYC ++F + +L++H
Sbjct: 417 KQHTRIHTGEKPFRCGYCGRAFTVKDYLNKHL 448
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 220 SVFYLSISILTLMLLPIFYLIVYLYQ--REMRGGTQELKRIPRVGRKA 265
SV ++SIS + LM++ + +LI Y Q R M+ Q+ + + V +KA
Sbjct: 234 SVLFVSISFIVLMIISLVWLIFYYIQRFRYMQAKDQQSRNLCSVTKKA 281
>sp|Q5RJ54|ZN187_MOUSE Zinc finger protein 187 OS=Mus musculus GN=Znf187 PE=2 SV=1
Length = 466
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 84 NDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHF 121
+D+ R H+IH ++C C+K+FR LDQH
Sbjct: 395 SDLIR---HHRIHTGEKPFKCNVCQKAFRLNSHLDQHV 429
>sp|Q6XDT4|IKZF_OIKDI Ikaros family zinc finger protein OS=Oikopleura dioica PE=2 SV=1
Length = 562
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 94 KIHVDINEWRCGYCKKSFRAEKFLDQH 120
+IH D+ +RC YC +S+++ + + +H
Sbjct: 121 RIHSDMRPYRCSYCARSYKSRQSMKEH 147
>sp|P49711|CTCF_HUMAN Transcriptional repressor CTCF OS=Homo sapiens GN=CTCF PE=1 SV=1
Length = 727
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 90 QEQHKI-----HVDINEWRCGYCKKSFRAEKFLDQHFDNRHN 126
QE+H I H + C +C K+FR ++ LD HF H+
Sbjct: 506 QERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 547
>sp|Q61164|CTCF_MOUSE Transcriptional repressor CTCF OS=Mus musculus GN=Ctcf PE=1 SV=2
Length = 736
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 90 QEQHKI-----HVDINEWRCGYCKKSFRAEKFLDQHFDNRHN 126
QE+H I H + C +C K+FR ++ LD HF H+
Sbjct: 506 QERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 547
>sp|Q9R1D1|CTCF_RAT Transcriptional repressor CTCF OS=Rattus norvegicus GN=Ctcf PE=2
SV=1
Length = 737
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 90 QEQHKI-----HVDINEWRCGYCKKSFRAEKFLDQHFDNRHN 126
QE+H I H + C +C K+FR ++ LD HF H+
Sbjct: 506 QERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 547
>sp|Q08705|CTCF_CHICK Transcriptional repressor CTCF OS=Gallus gallus GN=CTCF PE=1 SV=1
Length = 728
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 90 QEQH-----KIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHN 126
QE+H + H + C +C K+FR ++ LD HF H+
Sbjct: 506 QERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 547
>sp|Q8N9F8|ZN454_HUMAN Zinc finger protein 454 OS=Homo sapiens GN=ZNF454 PE=2 SV=2
Length = 522
Score = 31.6 bits (70), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 83 DNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQH 120
DN F KIH +RCG C+K+FR + L QH
Sbjct: 395 DNSSFARHR--KIHTGEKPYRCGLCEKAFRDQSALAQH 430
>sp|Q8TD17|ZN398_HUMAN Zinc finger protein 398 OS=Homo sapiens GN=ZNF398 PE=2 SV=1
Length = 642
Score = 31.2 bits (69), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 94 KIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNN 127
+IH + C YC +SFR ++ L H + HN
Sbjct: 559 RIHTGERPYPCSYCGRSFRYKQTLKDHLRSGHNG 592
>sp|Q9GKR7|IQCG_MACFA IQ domain-containing protein G OS=Macaca fascicularis GN=IQCG PE=2
SV=1
Length = 443
Score = 31.2 bits (69), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 13/95 (13%)
Query: 60 EEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQ 119
EE L+ +E+++ + + R+H D +MF ++Q K+ + W Y K D
Sbjct: 288 EEVLLEEIEKLRMKTEEEARIHMDIEMFLRKQQQKLEERLEFWMEKYDK---------DT 338
Query: 120 HFDNRHNNLLNVSHGKCLA---DLCGAL-HCDFVM 150
N L + LA DL + C+ V+
Sbjct: 339 EMKQNELNALKATKASDLAHLQDLAKTIRECEQVI 373
>sp|P59511|ATS20_MOUSE A disintegrin and metalloproteinase with thrombospondin motifs 20
OS=Mus musculus GN=Adamts20 PE=2 SV=2
Length = 1906
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 136 CLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLAN 176
C+ LC CD V+NSK+ R KC + C++LA
Sbjct: 684 CVQGLCRQAGCDHVLNSKAKRDKC--GVCGGDNSSCQTLAG 722
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,300,220
Number of Sequences: 539616
Number of extensions: 3949873
Number of successful extensions: 16798
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 16580
Number of HSP's gapped (non-prelim): 245
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)