Query 024418
Match_columns 268
No_of_seqs 301 out of 1216
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 04:27:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024418.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024418hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14119 gpmA phosphoglyceromu 100.0 3.7E-33 8.1E-38 244.4 12.2 151 84-267 1-188 (228)
2 PRK14116 gpmA phosphoglyceromu 100.0 4.3E-33 9.3E-38 244.0 12.0 151 84-267 1-188 (228)
3 PRK13463 phosphatase PhoE; Pro 100.0 2.5E-33 5.3E-38 241.3 9.7 145 84-267 2-157 (203)
4 PRK15004 alpha-ribazole phosph 100.0 2.2E-32 4.9E-37 234.4 10.1 144 85-267 1-155 (199)
5 PRK01295 phosphoglyceromutase; 100.0 6.7E-32 1.5E-36 233.0 12.9 151 83-266 1-163 (206)
6 PRK14117 gpmA phosphoglyceromu 100.0 6.9E-32 1.5E-36 236.7 12.3 150 84-266 1-187 (230)
7 PRK14118 gpmA phosphoglyceromu 100.0 8.8E-32 1.9E-36 235.6 11.6 149 85-266 1-186 (227)
8 PRK14120 gpmA phosphoglyceromu 100.0 1.9E-31 4.2E-36 236.3 12.7 152 82-266 2-188 (249)
9 PRK13462 acid phosphatase; Pro 100.0 2.8E-31 6.1E-36 228.7 12.9 141 83-266 4-152 (203)
10 PRK01112 phosphoglyceromutase; 100.0 2E-31 4.4E-36 233.5 11.3 166 84-267 1-187 (228)
11 TIGR01258 pgm_1 phosphoglycera 100.0 3.7E-31 8.1E-36 234.1 11.4 150 85-267 1-187 (245)
12 PRK03482 phosphoglycerate muta 100.0 3.8E-31 8.1E-36 229.3 11.0 145 84-267 1-156 (215)
13 TIGR03162 ribazole_cobC alpha- 100.0 3.8E-31 8.3E-36 221.9 10.0 140 87-267 1-151 (177)
14 PRK14115 gpmA phosphoglyceromu 100.0 6.9E-31 1.5E-35 232.7 11.7 150 85-267 1-187 (247)
15 COG0406 phoE Broad specificity 100.0 7.2E-31 1.6E-35 226.0 11.3 147 83-266 1-158 (208)
16 TIGR03848 MSMEG_4193 probable 100.0 4E-30 8.8E-35 221.2 10.9 141 86-267 1-158 (204)
17 KOG4754 Predicted phosphoglyce 100.0 5E-30 1.1E-34 216.1 10.8 179 75-266 5-193 (248)
18 smart00855 PGAM Phosphoglycera 100.0 4.4E-29 9.5E-34 205.3 11.6 145 86-267 1-154 (155)
19 PRK07238 bifunctional RNase H/ 100.0 3E-29 6.6E-34 234.3 11.0 148 82-267 169-326 (372)
20 PF00300 His_Phos_1: Histidine 100.0 7E-30 1.5E-34 208.6 3.0 144 86-266 1-156 (158)
21 KOG0235 Phosphoglycerate mutas 99.9 5.6E-27 1.2E-31 201.2 12.7 150 84-266 5-169 (214)
22 PTZ00322 6-phosphofructo-2-kin 99.9 2E-26 4.4E-31 229.6 10.2 160 85-266 420-590 (664)
23 COG0588 GpmA Phosphoglycerate 99.9 2.4E-25 5.2E-30 188.5 7.0 150 84-266 1-187 (230)
24 PTZ00123 phosphoglycerate muta 99.9 1.2E-24 2.5E-29 191.7 10.2 138 97-267 1-175 (236)
25 PTZ00122 phosphoglycerate muta 99.8 7E-21 1.5E-25 172.9 11.6 134 83-267 101-246 (299)
26 cd07067 HP_PGM_like Histidine 99.8 4.5E-20 9.8E-25 150.8 10.1 70 86-164 1-70 (153)
27 KOG3734 Predicted phosphoglyce 99.8 4.9E-18 1.1E-22 150.2 10.8 164 83-267 11-208 (272)
28 cd07040 HP Histidine phosphata 99.7 1.2E-17 2.5E-22 135.6 9.8 70 86-164 1-70 (153)
29 PRK06193 hypothetical protein; 99.7 4.2E-17 9.2E-22 140.3 11.7 81 80-164 38-118 (206)
30 TIGR00249 sixA phosphohistidin 99.7 5.7E-17 1.2E-21 133.6 10.8 67 85-164 1-67 (152)
31 PRK15416 lipopolysaccharide co 99.7 3.5E-16 7.5E-21 133.7 11.1 81 83-197 53-133 (201)
32 PRK10848 phosphohistidine phos 99.6 7.5E-16 1.6E-20 127.9 8.7 67 85-164 1-67 (159)
33 COG2062 SixA Phosphohistidine 99.6 2.9E-15 6.3E-20 124.0 8.4 70 84-164 1-70 (163)
34 KOG0234 Fructose-6-phosphate 2 99.6 6.1E-15 1.3E-19 137.6 8.5 140 84-266 239-388 (438)
35 KOG4609 Predicted phosphoglyce 99.5 2.8E-14 6.1E-19 121.2 9.0 131 83-266 93-230 (284)
36 cd07061 HP_HAP_like Histidine 98.0 1.1E-05 2.5E-10 70.7 6.6 62 85-164 4-73 (242)
37 PF00328 His_Phos_2: Histidine 97.2 0.00091 2E-08 60.7 7.2 48 117-164 62-116 (347)
38 KOG3720 Lysosomal & prostatic 97.0 0.0027 5.8E-08 60.5 8.3 79 85-165 36-128 (411)
39 PRK10173 glucose-1-phosphatase 96.3 0.017 3.6E-07 55.2 8.3 83 84-166 32-130 (413)
40 PRK10172 phosphoanhydride phos 96.1 0.023 4.9E-07 54.5 7.8 82 85-166 36-132 (436)
41 KOG1057 Arp2/3 complex-interac 92.2 0.15 3.3E-06 51.4 3.9 48 117-164 511-571 (1018)
42 KOG1382 Multiple inositol poly 82.7 3.7 8.1E-05 39.5 6.5 51 115-165 130-183 (467)
43 cd07397 MPP_DevT Myxococcus xa 43.2 50 0.0011 29.2 5.0 45 210-267 114-160 (238)
44 KOG3672 Histidine acid phospha 30.4 74 0.0016 30.4 4.1 47 117-163 168-225 (487)
45 PF05374 Mu-conotoxin: Mu-Cono 28.2 29 0.00063 18.8 0.7 12 31-42 2-13 (22)
46 PF04270 Strep_his_triad: Stre 26.7 35 0.00075 23.0 1.0 31 86-130 20-50 (53)
No 1
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.7e-33 Score=244.38 Aligned_cols=151 Identities=17% Similarity=0.134 Sum_probs=123.6
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcC
Q 024418 84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 163 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~ 163 (268)
|++|||||||||.+|..+.++ |+.|.|||+.|++||+++++.|+..+ .++|.|||||++||+|||+++++.
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~-------G~~D~pLt~~G~~QA~~l~~~L~~~~--~~~d~i~sSpL~Ra~~TA~~i~~~ 71 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFT-------GWEDVNLSEQGINEATRAGEKVRENN--IAIDVAFTSLLTRALDTTHYILTE 71 (228)
T ss_pred CCEEEEEeCCCCCcccCCCcc-------CCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEeCccHHHHHHHHHHHHh
Confidence 468999999999999999985 88999999999999999999998643 468999999999999999999875
Q ss_pred CCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccC-----------
Q 024418 164 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTC----------- 231 (268)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~----------- 231 (268)
.+ ....++..+++|+| +|| .| +|++.+++.+.||...+..|..+
T Consensus 72 ~~------------------~~~~~~~~~~~LrE~~fG-~w-----eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~ 127 (228)
T PRK14119 72 SK------------------QQWIPVYKSWRLNERHYG-GL-----QGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEE 127 (228)
T ss_pred cc------------------cCCCCeeECCCccccccc-cc-----cCCcHHHHHHHccHHHHHHHHcccccCCCccccc
Confidence 41 01246788999999 999 99 99999999998885323333211
Q ss_pred ------------------CCCCCCHHHHHhhhc--cc--c-cc--CCCEEEEEeCCccccC
Q 024418 232 ------------------IILLTAASSSACRGF--IH--V-TR--EEASASITLFSQQSTL 267 (268)
Q Consensus 232 ------------------~~~~ES~~~~~~Rv~--L~--~-~~--~~~~IlIVsHgg~i~l 267 (268)
.+.+||+.++.+|+. ++ . .. ++++|||||||++|+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir~ 188 (228)
T PRK14119 128 QREAYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRA 188 (228)
T ss_pred ccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHHH
Confidence 134599999999999 65 2 22 6789999999999863
No 2
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=4.3e-33 Score=244.03 Aligned_cols=151 Identities=17% Similarity=0.097 Sum_probs=123.4
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcC
Q 024418 84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 163 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~ 163 (268)
|++|||||||||.+|..++++ |+.|.|||+.|++||+++++.|+..+ .++|.|||||+.||+|||++|++.
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~-------G~~D~pLt~~G~~QA~~l~~~L~~~~--~~~d~i~sSpL~Ra~qTA~~i~~~ 71 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFT-------GWVDVDLSEKGVEEAKKAGRLIKEAG--LEFDQAYTSVLTRAIKTLHYALEE 71 (228)
T ss_pred CCEEEEEeCCCCCCccccCcC-------CCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEECChHHHHHHHHHHHHh
Confidence 468999999999999999985 88999999999999999999998643 469999999999999999999875
Q ss_pred CCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCccccccc------------
Q 024418 164 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHT------------ 230 (268)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~------------ 230 (268)
.+ ....++..+++|+| +|| .| +|++.+++.+.+|+..+..|..
T Consensus 72 ~~------------------~~~~~~~~~~~LrE~~fG-~w-----EG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~ 127 (228)
T PRK14116 72 SD------------------QLWIPETKTWRLNERHYG-AL-----QGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDAD 127 (228)
T ss_pred cC------------------cCCCCcccCcccccccch-hh-----cCCCHHHHHHHhhhhHHHHHhhcccccCcccccc
Confidence 41 01136778899999 999 99 9999999999888532322221
Q ss_pred -----------------CCCCCCCHHHHHhhhc--cc--cc---cCCCEEEEEeCCccccC
Q 024418 231 -----------------CIILLTAASSSACRGF--IH--VT---REEASASITLFSQQSTL 267 (268)
Q Consensus 231 -----------------~~~~~ES~~~~~~Rv~--L~--~~---~~~~~IlIVsHgg~i~l 267 (268)
..+.+||+.++.+|+. ++ +. .++++|||||||++|+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~vir~ 188 (228)
T PRK14116 128 DEGSAAKDRRYANLDPRIIPGGENLKVTLERVIPFWEDHIAPDLLDGKNVIIAAHGNSLRA 188 (228)
T ss_pred cccccccchhhhccCccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCeEEEEcChHHHHH
Confidence 1144599999999999 65 32 36789999999999863
No 3
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=2.5e-33 Score=241.32 Aligned_cols=145 Identities=21% Similarity=0.164 Sum_probs=125.5
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcC
Q 024418 84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 163 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~ 163 (268)
+++|||||||||.+|..+.++ |+.|+|||++|++||+.+++.|+. .+++.|||||+.||+|||+++++.
T Consensus 2 ~~~i~lvRHG~t~~n~~~~~~-------G~~d~~Lt~~G~~Qa~~~~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~ 70 (203)
T PRK13463 2 KTTVYVTRHGETEWNVAKRMQ-------GRKNSALTENGILQAKQLGERMKD----LSIHAIYSSPSERTLHTAELIKGE 70 (203)
T ss_pred ceEEEEEeCCCCccchhCccc-------CCCCCCcCHHHHHHHHHHHHHhcC----CCCCEEEECCcHHHHHHHHHHHhc
Confidence 478999999999999998884 788999999999999999999987 578999999999999999999876
Q ss_pred CCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC-----CCCCC
Q 024418 164 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI-----ILLTA 237 (268)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~-----~~~ES 237 (268)
+ ..|+.++++|+| +|| .| +|++.+++.+.||+. +..|..++ +.+||
T Consensus 71 ~---------------------~~~~~~~~~l~E~~~G-~~-----eG~~~~e~~~~~p~~-~~~~~~~~~~~~~~~gEs 122 (203)
T PRK13463 71 R---------------------DIPIIADEHFYEINMG-IW-----EGQTIDDIERQYPDD-IQLFWNEPHLFQSTSGEN 122 (203)
T ss_pred C---------------------CCCceECcCceeCCCC-cc-----CCCcHHHHhhhCHHH-HHHHHhChhccCCCCCeE
Confidence 5 247889999999 999 99 999999999999974 65555443 34499
Q ss_pred HHHHHhhhc--cc--c-ccCCCEEEEEeCCccccC
Q 024418 238 ASSSACRGF--IH--V-TREEASASITLFSQQSTL 267 (268)
Q Consensus 238 ~~~~~~Rv~--L~--~-~~~~~~IlIVsHgg~i~l 267 (268)
+.++..|+. ++ . ..++++|+|||||++|++
T Consensus 123 ~~~~~~R~~~~l~~i~~~~~~~~vlvVsHg~~ir~ 157 (203)
T PRK13463 123 FEAVHKRVIEGMQLLLEKHKGESILIVSHAAAAKL 157 (203)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHH
Confidence 999999998 66 2 346789999999999864
No 4
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=99.97 E-value=2.2e-32 Score=234.43 Aligned_cols=144 Identities=19% Similarity=0.116 Sum_probs=123.2
Q ss_pred cEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 85 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 85 ~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
|+|||||||||.+|..+.++ |+.|+|||+.|++||+++++.|+. .+++.|||||++||+|||+++++..
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~-------G~~d~pLt~~G~~Qa~~~~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~ 69 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYS-------GHAPTPLTARGIEQAQNLHTLLRD----VPFDLVLCSELERAQHTARLVLSDR 69 (199)
T ss_pred CeEEEEeCCCCccccCCcEe-------CCCCCCcCHHHHHHHHHHHHHHhC----CCCCEEEECchHHHHHHHHHHHhcC
Confidence 47999999999999988874 788999999999999999999987 6799999999999999999999866
Q ss_pred CCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC-----CCCCCH
Q 024418 165 GESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI-----ILLTAA 238 (268)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~-----~~~ES~ 238 (268)
..++.++++|+| +|| .| +|++..++...+|+. +..|..++ +.+||+
T Consensus 70 ---------------------~~~~~~~~~L~E~~~G-~~-----eg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gEs~ 121 (199)
T PRK15004 70 ---------------------QLPVHIIPELNEMFFG-DW-----EMRHHRDLMQEDAEN-YAAWCNDWQHAIPTNGEGF 121 (199)
T ss_pred ---------------------CCCceeChhheeCCCc-cc-----CCCCHHHHHHHCHHH-HHHHHhChhhcCCCCCcCH
Confidence 246788999999 999 99 999999998888764 55554432 345999
Q ss_pred HHHHhhhc--cc-c--ccCCCEEEEEeCCccccC
Q 024418 239 SSSACRGF--IH-V--TREEASASITLFSQQSTL 267 (268)
Q Consensus 239 ~~~~~Rv~--L~-~--~~~~~~IlIVsHgg~i~l 267 (268)
.++..|+. ++ + ..++++|+|||||++|++
T Consensus 122 ~~~~~Rv~~~l~~l~~~~~~~~iliVsHg~~i~~ 155 (199)
T PRK15004 122 QAFSQRVERFIARLSAFQHYQNLLIVSHQGVLSL 155 (199)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEcChHHHHH
Confidence 99999999 66 3 235789999999999863
No 5
>PRK01295 phosphoglyceromutase; Provisional
Probab=99.97 E-value=6.7e-32 Score=233.05 Aligned_cols=151 Identities=18% Similarity=0.145 Sum_probs=124.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHc
Q 024418 83 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 162 (268)
Q Consensus 83 ~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~ 162 (268)
|.++|||||||||.+|..+.++ |+.|.|||+.|++||+++++.|++.+ .++|.|||||+.||+|||++|++
T Consensus 1 ~~~~i~LVRHGet~~n~~~~~~-------G~~d~~Lt~~G~~qA~~~~~~L~~~~--~~~d~i~sSpl~Ra~qTA~~i~~ 71 (206)
T PRK01295 1 MSRTLVLVRHGQSEWNLKNLFT-------GWRDPDLTEQGVAEAKAAGRKLKAAG--LKFDIAFTSALSRAQHTCQLILE 71 (206)
T ss_pred CCceEEEEeCCCCcccccCCcC-------CCCCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEeCCcHHHHHHHHHHHH
Confidence 4578999999999999988874 78899999999999999999998643 46999999999999999999998
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccC----CCCCCC
Q 024418 163 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTC----IILLTA 237 (268)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~----~~~~ES 237 (268)
.++ .+..++.++++|+| +|| .| +|++.+++.+.+|......|..+ ++.+||
T Consensus 72 ~~~------------------~~~~~~~~~~~L~E~~~G-~~-----eg~~~~e~~~~~~~~~~~~~~~~~~~~~p~GES 127 (206)
T PRK01295 72 ELG------------------QPGLETIRDQALNERDYG-DL-----SGLNKDDARAKWGEEQVHIWRRSYDVPPPGGES 127 (206)
T ss_pred HcC------------------CCCCCeEECCcccccccc-cc-----cCCcHHHHHHHchHHHHHHhhcccCCCCcCCCC
Confidence 761 01247889999999 999 99 99999999999885323334322 245599
Q ss_pred HHHHHhhhc--c-c-c-c--cCCCEEEEEeCCcccc
Q 024418 238 ASSSACRGF--I-H-V-T--REEASASITLFSQQST 266 (268)
Q Consensus 238 ~~~~~~Rv~--L-~-~-~--~~~~~IlIVsHgg~i~ 266 (268)
+.++.+|+. + + + . ..+++|||||||++|+
T Consensus 128 ~~~~~~Rv~~~~~~~i~~~~~~~~~vliVtHg~~ir 163 (206)
T PRK01295 128 LKDTGARVLPYYLQEILPRVLRGERVLVAAHGNSLR 163 (206)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeEEEEcChHHHH
Confidence 999999998 3 3 2 2 3578999999999985
No 6
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=6.9e-32 Score=236.70 Aligned_cols=150 Identities=18% Similarity=0.115 Sum_probs=121.8
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcC
Q 024418 84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 163 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~ 163 (268)
|++|||||||||.+|..+.++ |+.|.|||++|++||+++++.|+..+ .+++.|||||++||+|||++++..
T Consensus 1 m~~l~LvRHG~t~~n~~~~~q-------G~~D~~Lt~~G~~qa~~~~~~l~~~~--~~~~~i~sSpl~Ra~~TA~~i~~~ 71 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFT-------GWADVDLSEKGTQQAIDAGKLIKEAG--IEFDLAFTSVLKRAIKTTNLALEA 71 (230)
T ss_pred CCEEEEEeCccccCcccCCcC-------CCCCCCcCHHHHHHHHHHHHHHHHcC--CCCCEEEECCcHHHHHHHHHHHHh
Confidence 468999999999999999985 88999999999999999999998633 468999999999999999998753
Q ss_pred CCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccC-----------
Q 024418 164 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTC----------- 231 (268)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~----------- 231 (268)
.. ....++..+++|+| +|| .| +|++.+++.+.||...+..|..+
T Consensus 72 ~~------------------~~~~~~~~~~~LrE~~fG-~w-----EG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~ 127 (230)
T PRK14117 72 SD------------------QLWVPVEKSWRLNERHYG-GL-----TGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKD 127 (230)
T ss_pred cc------------------cCCCCceeCCccccccch-hh-----cCCCHHHHHHHccHHHHHHHhcccccCCCccccc
Confidence 21 01246788999999 999 99 99999999999885312223211
Q ss_pred ------------------CCCCCCHHHHHhhhc--cc--c-c--cCCCEEEEEeCCcccc
Q 024418 232 ------------------IILLTAASSSACRGF--IH--V-T--REEASASITLFSQQST 266 (268)
Q Consensus 232 ------------------~~~~ES~~~~~~Rv~--L~--~-~--~~~~~IlIVsHgg~i~ 266 (268)
.+.+||+.++.+|+. ++ . . ..+++|+|||||++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~~ir 187 (230)
T PRK14117 128 DEYSAHTDRRYASLDDSVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIR 187 (230)
T ss_pred ccccccccccccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHHHH
Confidence 134499999999998 65 2 2 2468999999999986
No 7
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=8.8e-32 Score=235.60 Aligned_cols=149 Identities=14% Similarity=0.096 Sum_probs=121.2
Q ss_pred cEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 85 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 85 ~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
|+|||||||||.+|..++++ |+.|.|||+.|++||+++++.|+..+ .++|.|||||+.||+|||++|++..
T Consensus 1 m~l~LvRHG~t~~n~~~~~~-------G~~d~~Lt~~G~~qa~~~~~~l~~~~--~~~d~i~sSpl~Ra~~TA~~i~~~~ 71 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFT-------GWRDVNLTERGVEEAKAAGKKLKEAG--YEFDIAFTSVLTRAIKTCNIVLEES 71 (227)
T ss_pred CEEEEEecCCCccccccCcC-------CCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEEeChHHHHHHHHHHHHhc
Confidence 47999999999999999885 78999999999999999999998633 4689999999999999999998754
Q ss_pred CCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCccccccc-------------
Q 024418 165 GESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHT------------- 230 (268)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~------------- 230 (268)
+ ....+++.+++|+| +|| .| +|++.+++.+.+|+..+..|..
T Consensus 72 ~------------------~~~~~~~~~~~LrE~~fG-~w-----EG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~ 127 (227)
T PRK14118 72 N------------------QLWIPQVKNWRLNERHYG-AL-----QGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQD 127 (227)
T ss_pred C------------------CCCCCeecCCccccccCc-cc-----cCCcHHHHHHHhhHHHHHHHHhccccCCCcccccc
Confidence 1 00136778899999 999 99 9999999998887531222211
Q ss_pred ----------------CCCCCCCHHHHHhhhc--cc--cc---cCCCEEEEEeCCcccc
Q 024418 231 ----------------CIILLTAASSSACRGF--IH--VT---REEASASITLFSQQST 266 (268)
Q Consensus 231 ----------------~~~~~ES~~~~~~Rv~--L~--~~---~~~~~IlIVsHgg~i~ 266 (268)
..+.+||+.++.+|+. ++ .. +++++||||||||+|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHggvir 186 (227)
T PRK14118 128 PNSAHNDRRYAHLPADVVPDAENLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGNSLR 186 (227)
T ss_pred ccccccchhhccCcCCCCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHHHHH
Confidence 1144599999999998 65 22 3678999999999985
No 8
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=1.9e-31 Score=236.33 Aligned_cols=152 Identities=17% Similarity=0.088 Sum_probs=124.1
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHH
Q 024418 82 QHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVF 161 (268)
Q Consensus 82 ~~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~ 161 (268)
.+|++|||||||||.+|..+.++ |+.|.|||++|++||+++++.|+..+ ..++.|||||+.||+|||++++
T Consensus 2 ~~m~~i~LVRHGqt~~n~~~~~~-------G~~D~pLTe~G~~QA~~~a~~l~~~~--~~~~~IysSpl~Ra~qTA~~i~ 72 (249)
T PRK14120 2 MMTYTLVLLRHGESEWNAKNLFT-------GWVDVDLTEKGEAEAKRGGELLAEAG--VLPDVVYTSLLRRAIRTANLAL 72 (249)
T ss_pred CCCcEEEEEeCCCCcccccCCcC-------CCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEecChHHHHHHHHHHH
Confidence 46789999999999999998884 78899999999999999999998643 3589999999999999999997
Q ss_pred cCCCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccC---------
Q 024418 162 GGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTC--------- 231 (268)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~--------- 231 (268)
+..+ ....++..+++|+| +|| .| +|++.+++.++||...+..|..+
T Consensus 73 ~~~~------------------~~~~~i~~~~~L~E~~fG-~~-----eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~ 128 (249)
T PRK14120 73 DAAD------------------RLWIPVRRSWRLNERHYG-AL-----QGKDKAETKAEYGEEQFMLWRRSYDTPPPPIE 128 (249)
T ss_pred Hhcc------------------cCCCCeEECCCccccccc-cc-----CCCCHHHHHHHccHHHHHHHHhccccCCCccc
Confidence 6431 01246888999999 999 99 99999999998885223333321
Q ss_pred ------------------CCCCCCHHHHHhhhc--cc---c--ccCCCEEEEEeCCcccc
Q 024418 232 ------------------IILLTAASSSACRGF--IH---V--TREEASASITLFSQQST 266 (268)
Q Consensus 232 ------------------~~~~ES~~~~~~Rv~--L~---~--~~~~~~IlIVsHgg~i~ 266 (268)
++.+||+.++.+|+. |+ . .+++++|||||||++|+
T Consensus 129 ~~~~~~~~~d~~~~~~~~~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~iliVsHggvir 188 (249)
T PRK14120 129 DGSEYSQDNDPRYADLGVGPRTECLKDVVARFLPYWEDDIVPDLKAGKTVLIAAHGNSLR 188 (249)
T ss_pred cccccccccCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCEEEEEeCHHHHH
Confidence 145599999999999 55 1 23678999999999986
No 9
>PRK13462 acid phosphatase; Provisional
Probab=99.97 E-value=2.8e-31 Score=228.70 Aligned_cols=141 Identities=18% Similarity=0.102 Sum_probs=119.0
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcC--EEEEcChHHHHHHHHHH
Q 024418 83 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKID--LVITSPLLRTLQTAVGV 160 (268)
Q Consensus 83 ~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d--~IysSPl~Ra~QTA~~i 160 (268)
+|++|||||||||.+|..++++ |+.|.|||+.|++||+++++.|+. .+++ .|||||+.||+|||+++
T Consensus 4 ~~~~i~LvRHG~t~~n~~~~~~-------G~~d~pLt~~G~~QA~~l~~~l~~----~~~~~~~i~sSpl~Ra~qTA~~i 72 (203)
T PRK13462 4 RNHRLLLLRHGETEWSKSGRHT-------GRTELELTETGRTQAELAGQALGE----LELDDPLVISSPRRRALDTAKLA 72 (203)
T ss_pred cccEEEEEeCCCCCcccCCCcc-------CCCCCCCCHHHHHHHHHHHHHHHh----CCCCCCEEEECchHHHHHHHHHh
Confidence 5789999999999999998885 788999999999999999999987 3455 79999999999999987
Q ss_pred HcCCCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCCCCCCCHH
Q 024418 161 FGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILLTAAS 239 (268)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~~~~ES~~ 239 (268)
.. .....+++|+| +|| .| +|++.+++.+.+|+ +..|....+.+||+.
T Consensus 73 --~~----------------------~~~~~~~~LrE~~~G-~~-----eG~~~~ei~~~~~~--~~~~~~~~p~gES~~ 120 (203)
T PRK13462 73 --GL----------------------TVDEVSGLLAEWDYG-SY-----EGLTTPQIRESEPD--WLVWTHGCPGGESVA 120 (203)
T ss_pred --cC----------------------cccccCccccccCCc-cc-----cCCcHHHHHHhCch--HHhhcCCCCCCccHH
Confidence 23 12356899999 999 99 99999999999986 334544445669999
Q ss_pred HHHhhhc--cc--c-ccCCCEEEEEeCCcccc
Q 024418 240 SSACRGF--IH--V-TREEASASITLFSQQST 266 (268)
Q Consensus 240 ~~~~Rv~--L~--~-~~~~~~IlIVsHgg~i~ 266 (268)
++.+|+. ++ . ..++++|+|||||++|+
T Consensus 121 ~~~~Rv~~~l~~i~~~~~~~~vliVsHg~vir 152 (203)
T PRK13462 121 QVNERADRAVALALEHMESRDVVFVSHGHFSR 152 (203)
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeCCHHHH
Confidence 9999998 66 2 23568999999999986
No 10
>PRK01112 phosphoglyceromutase; Provisional
Probab=99.97 E-value=2e-31 Score=233.45 Aligned_cols=166 Identities=17% Similarity=0.151 Sum_probs=124.8
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcC
Q 024418 84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 163 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~ 163 (268)
|++||||||||+.+|..+.++ |+.|.|||+.|++||+++++.|++ .++|.|||||+.||+|||+.+++.
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~-------G~~D~~Lte~G~~Qa~~l~~~L~~----~~~d~iysSpl~Ra~qTA~~i~~~ 69 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFT-------GWVDIPLSQQGIAEAIAAGEKIKD----LPIDCIFTSTLVRSLMTALLAMTN 69 (228)
T ss_pred CcEEEEEeCCCCccccccccC-------CCCCCCcCHHHHHHHHHHHHHhhc----CCCCEEEEcCcHHHHHHHHHHHHh
Confidence 578999999999999998884 789999999999999999999997 679999999999999999999853
Q ss_pred CCCC---C----CCCCCCCCccc--ccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccC--
Q 024418 164 DGES---Q----TDGIDAHPSLT--ATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTC-- 231 (268)
Q Consensus 164 ~~~~---~----~~~~~~~p~~~--~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~-- 231 (268)
++.. . .++.. .+... ........|+..+++|+| +|| .| +|++.+++.+.||...+..|..+
T Consensus 70 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~E~~~G-~~-----eG~~~~ei~~~~~~~~~~~w~~~~~ 142 (228)
T PRK01112 70 HSSGKIPYIVHEEDDKK-WMSRIYSDEEPEQMIPLFQSSALNERMYG-EL-----QGKNKAETAEKFGEEQVKLWRRSYK 142 (228)
T ss_pred hcccccccccccccccc-cccccccccccccCCCeeecCcccccccc-cc-----CCCCHHHHHHHCcHHHHHHHhCcCC
Confidence 3100 0 00000 00000 000011347888999999 999 99 99999999999985423444422
Q ss_pred --CCCCCCHHHHHhhhc--cc---cc--cCCCEEEEEeCCccccC
Q 024418 232 --IILLTAASSSACRGF--IH---VT--REEASASITLFSQQSTL 267 (268)
Q Consensus 232 --~~~~ES~~~~~~Rv~--L~---~~--~~~~~IlIVsHgg~i~l 267 (268)
++.+||+.++.+|+. ++ .. ..+++|+|||||++|+.
T Consensus 143 ~~~p~GES~~d~~~Rv~~~l~~~~~~~~~~~~~ilVVsHg~vir~ 187 (228)
T PRK01112 143 TAPPQGESLEDTGQRTLPYFQNRILPHLQQGKNVFVSAHGNSLRS 187 (228)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHH
Confidence 245599999999998 55 22 25789999999999863
No 11
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=99.97 E-value=3.7e-31 Score=234.07 Aligned_cols=150 Identities=18% Similarity=0.108 Sum_probs=121.8
Q ss_pred cEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 85 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 85 ~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
|+|||||||||.+|..+.++ |+.|.+||+.|++||+.+++.|+..+ .+++.|||||++||+|||++++..+
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~-------G~~D~~Lt~~G~~QA~~la~~L~~~~--~~~d~iysSpl~Ra~qTA~ii~~~~ 71 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFT-------GWVDVKLSEKGQQEAKRAGELLKEEG--YEFDVAYTSLLKRAIHTLNIALDEL 71 (245)
T ss_pred CEEEEEeCCCcCccccCCcC-------CCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEEcChHHHHHHHHHHHHhc
Confidence 47999999999999999884 78899999999999999999998643 4689999999999999999998866
Q ss_pred CCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccC------------
Q 024418 165 GESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTC------------ 231 (268)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~------------ 231 (268)
+ ....++..++.|+| +|| .| +|++.+++.+.||...+..|..+
T Consensus 72 ~------------------~~~~~i~~~~~L~E~~~G-~~-----eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~ 127 (245)
T TIGR01258 72 D------------------QLWIPVKKSWRLNERHYG-AL-----QGLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESD 127 (245)
T ss_pred C------------------CCCCCeeeCcccccccCC-CC-----cCCCHHHHHHHhhHHHHHHHHhhccCCCCcCCccc
Confidence 1 00135777899999 999 99 99999999988875212222210
Q ss_pred -----------------CCCCCCHHHHHhhhc--cc--c-c--cCCCEEEEEeCCccccC
Q 024418 232 -----------------IILLTAASSSACRGF--IH--V-T--REEASASITLFSQQSTL 267 (268)
Q Consensus 232 -----------------~~~~ES~~~~~~Rv~--L~--~-~--~~~~~IlIVsHgg~i~l 267 (268)
.+.+||+.++.+|+. |+ . . .++++|+|||||++|+.
T Consensus 128 ~~~~~~d~~y~~~~~~~~p~GES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vir~ 187 (245)
T TIGR01258 128 PRSPHNDPRYAHLDPKVLPLTESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSLRA 187 (245)
T ss_pred ccccccChhhhcCCcccCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHHHH
Confidence 234599999999998 66 2 2 36789999999999863
No 12
>PRK03482 phosphoglycerate mutase; Provisional
Probab=99.97 E-value=3.8e-31 Score=229.34 Aligned_cols=145 Identities=21% Similarity=0.066 Sum_probs=119.1
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcC
Q 024418 84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 163 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~ 163 (268)
|++||||||||+.+|..+.++ |+.|.|||+.|++||+++++.|+. .+++.|||||+.||+|||+++++.
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~-------g~~d~~Lt~~G~~qA~~~~~~l~~----~~~~~I~sSpl~Ra~qTA~~i~~~ 69 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQ-------GQSDSPLTAKGEQQAMQVAERAKE----LGITHIISSDLGRTRRTAEIIAQA 69 (215)
T ss_pred CcEEEEEeCCCcccccccccC-------CCCCCCcCHHHHHHHHHHHHHHhc----CCCCEEEECCcHHHHHHHHHHHHh
Confidence 578999999999999988874 778999999999999999999987 578999999999999999999987
Q ss_pred CCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCccccccc-----CCCCCCC
Q 024418 164 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHT-----CIILLTA 237 (268)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~-----~~~~~ES 237 (268)
+ ..++.++++|+| +|| .| +|++.+++...++.+ ...+.. ..+.+||
T Consensus 70 ~---------------------~~~~~~~~~L~E~~~G-~~-----eg~~~~~~~~~~~~~-~~~~~~~~~~~~~p~gEs 121 (215)
T PRK03482 70 C---------------------GCDIIFDPRLRELNMG-VL-----EKRHIDSLTEEEEGW-RRQLVNGTVDGRIPEGES 121 (215)
T ss_pred c---------------------CCCeeEChhccccCCc-cc-----cCCcHHHHHhhHHHH-HHhhhcCCCccCCCCCcc
Confidence 7 246888999999 999 99 999999886544321 111111 1245599
Q ss_pred HHHHHhhhc--cc--c-ccCCCEEEEEeCCccccC
Q 024418 238 ASSSACRGF--IH--V-TREEASASITLFSQQSTL 267 (268)
Q Consensus 238 ~~~~~~Rv~--L~--~-~~~~~~IlIVsHgg~i~l 267 (268)
+.++..|+. ++ . ..++++|||||||++|++
T Consensus 122 ~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg~~i~~ 156 (215)
T PRK03482 122 MQELSDRMHAALESCLELPQGSRPLLVSHGIALGC 156 (215)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEeCcHHHHH
Confidence 999999999 66 2 335678999999999863
No 13
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=99.97 E-value=3.8e-31 Score=221.94 Aligned_cols=140 Identities=21% Similarity=0.117 Sum_probs=119.0
Q ss_pred EEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCCCC
Q 024418 87 LHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGE 166 (268)
Q Consensus 87 i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~~~ 166 (268)
||||||||+.+|..+.+ |+.|+|||+.|++||+.+++.|+. .+++.|||||+.||+|||+++++.++
T Consensus 1 i~lvRHg~t~~n~~~~~--------g~~d~~Lt~~G~~qa~~l~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~- 67 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY--------GQTDVPLAEKGAEQAAALREKLAD----VPFDAVYSSPLSRCRELAEILAERRG- 67 (177)
T ss_pred CEEEeCCCCccCCCcee--------CCCCCCcChhHHHHHHHHHHHhcC----CCCCEEEECchHHHHHHHHHHHhhcC-
Confidence 68999999999987764 568999999999999999999986 67999999999999999999998761
Q ss_pred CCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC-----CCCCCHHH
Q 024418 167 SQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI-----ILLTAASS 240 (268)
Q Consensus 167 ~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~-----~~~ES~~~ 240 (268)
.++.++++|+| ++| .| +|++.+++.+.||. +..|..++ +.+||+.+
T Consensus 68 --------------------~~~~~~~~L~E~~~G-~~-----~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~gEs~~~ 119 (177)
T TIGR03162 68 --------------------LPIIKDPRLREMDFG-DW-----EGRSWDEIPEAYPE--LDAWAADWQHARPPGGESFAD 119 (177)
T ss_pred --------------------CCceECCccccccCC-cc-----CCCCHHHHHHhCHH--HHHHHhCcccCCCcCCCCHHH
Confidence 46788999999 999 88 99999999998882 55454433 34599999
Q ss_pred HHhhhc--cc--cc-cCCCEEEEEeCCccccC
Q 024418 241 SACRGF--IH--VT-REEASASITLFSQQSTL 267 (268)
Q Consensus 241 ~~~Rv~--L~--~~-~~~~~IlIVsHgg~i~l 267 (268)
+.+|+. ++ .. .++++|+|||||++|+.
T Consensus 120 ~~~R~~~~~~~l~~~~~~~~vlvVsHg~~i~~ 151 (177)
T TIGR03162 120 FYQRVSEFLEELLKAHEGDNVLIVTHGGVIRA 151 (177)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECHHHHHH
Confidence 999999 66 22 35789999999999863
No 14
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=6.9e-31 Score=232.65 Aligned_cols=150 Identities=18% Similarity=0.131 Sum_probs=122.0
Q ss_pred cEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 85 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 85 ~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
|+|||||||||.+|..++++ |+.|.|||+.|++||+++++.|+..+ .++|.|||||+.||+|||++|++.+
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~-------G~~D~pLte~G~~QA~~la~~L~~~~--~~~d~IysSpl~Ra~qTA~~i~~~~ 71 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFT-------GWTDVDLSEKGVSEAKAAGKLLKEEG--YTFDVAYTSVLKRAIRTLWIVLDEL 71 (247)
T ss_pred CEEEEEECCCcccccccCcC-------CCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEEcCCHHHHHHHHHHHHHc
Confidence 57999999999999998884 78899999999999999999998644 4689999999999999999998866
Q ss_pred CCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCccccccc-------------
Q 024418 165 GESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHT------------- 230 (268)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~------------- 230 (268)
+ ....++..+++|+| +|| .| +|++.+++.+.+|...+..|..
T Consensus 72 ~------------------~~~~~~~~~~~L~E~~fG-~~-----eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (247)
T PRK14115 72 D------------------QMWLPVEKSWRLNERHYG-AL-----QGLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDD 127 (247)
T ss_pred C------------------CCCCCceECccccccccc-cc-----cCCCHHHHHHHhhHHHHHHHhcccccCCCcccccc
Confidence 1 01136788999999 999 99 9999999998876421222221
Q ss_pred ----------------CCCCCCCHHHHHhhhc--cc--cc---cCCCEEEEEeCCccccC
Q 024418 231 ----------------CIILLTAASSSACRGF--IH--VT---REEASASITLFSQQSTL 267 (268)
Q Consensus 231 ----------------~~~~~ES~~~~~~Rv~--L~--~~---~~~~~IlIVsHgg~i~l 267 (268)
..+.+||+.++..|+. |+ +. .++++|+|||||++|+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVtHggvir~ 187 (247)
T PRK14115 128 ERYPGHDPRYAKLPEEELPLTESLKDTIARVLPYWNETIAPQLKSGKRVLIAAHGNSLRA 187 (247)
T ss_pred cccccccchhhcccCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHH
Confidence 1244599999999998 65 22 46789999999999863
No 15
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=99.97 E-value=7.2e-31 Score=225.99 Aligned_cols=147 Identities=21% Similarity=0.142 Sum_probs=125.8
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHc
Q 024418 83 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 162 (268)
Q Consensus 83 ~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~ 162 (268)
++++|||||||||.+|..+.++ |+.|+|||+.|++||+.+++.|+..+ ..++.||+||+.||+|||+++++
T Consensus 1 ~~~~i~lvRHGqt~~n~~~~~~-------G~~d~pLt~~G~~QA~~l~~~l~~~~--~~~~~i~sS~l~Ra~~TA~~~a~ 71 (208)
T COG0406 1 MMMRLYLVRHGETEWNVEGRLQ-------GWTDSPLTEEGRAQAEALAERLAARD--IGFDAIYSSPLKRAQQTAEPLAE 71 (208)
T ss_pred CceEEEEEecCCcccccccccc-------CCCCCCCCHHHHHHHHHHHHHHhhcC--CCCCEEEECchHHHHHHHHHHHH
Confidence 4679999999999999999985 68899999999999999999999533 57999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC-----CCCC
Q 024418 163 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI-----ILLT 236 (268)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~-----~~~E 236 (268)
.++ .++..++.|+| ++| .| +|++.+++.+.+|.. +..|..++ +.+|
T Consensus 72 ~~~---------------------~~~~~~~~l~E~~~G-~~-----eg~~~~e~~~~~p~~-~~~~~~~~~~~~~~~gE 123 (208)
T COG0406 72 ELG---------------------LPLEVDDRLREIDFG-DW-----EGLTIDELAEEPPEE-LAAWLADPYLAPPPGGE 123 (208)
T ss_pred hcC---------------------CCceecCCeeEeecc-cc-----cCCcHHHHHHhCHHH-HHHHhcCccccCCCCCC
Confidence 882 34788999999 999 99 999999999999875 66665544 2249
Q ss_pred CHHHHHhhhc--cc-c-c-cCCCEEEEEeCCcccc
Q 024418 237 AASSSACRGF--IH-V-T-REEASASITLFSQQST 266 (268)
Q Consensus 237 S~~~~~~Rv~--L~-~-~-~~~~~IlIVsHgg~i~ 266 (268)
|+.++..|+. ++ + . ..+++|+|||||++|+
T Consensus 124 s~~~~~~R~~~~~~~~~~~~~~~~vlvVsHg~~ir 158 (208)
T COG0406 124 SLADVSKRVVAALAELLRSPPGNNVLVVSHGGVIR 158 (208)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEEEEChHHHH
Confidence 9999999999 55 2 2 3344899999999985
No 16
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=99.96 E-value=4e-30 Score=221.17 Aligned_cols=141 Identities=18% Similarity=0.125 Sum_probs=115.9
Q ss_pred EEEEEcCCCCCCCCCCCCCCccccCCCCC-CCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 86 ILHLVRHGQGVHNMEGNNGPEALLSQEFF-DAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 86 ~i~LVRHGes~~N~~~~~~~~~~~~~g~~-D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
+||||||||+.+|..+.++ |+. |.|||+.|++||+++++.|+. .++|.|||||+.||+|||+++++.+
T Consensus 1 ~i~lvRHG~t~~n~~~~~~-------g~~~d~~Lt~~G~~qa~~l~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~ 69 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLA-------GRTPGVDLDERGREQAAALAERLAD----LPIAAIVSSPLERCRETAEPIAEAR 69 (204)
T ss_pred CEEEEeCCCCCcccccccc-------CCCCCCCcCHHHHHHHHHHHHHHhc----CCCCEEEeCcHHHHHHHHHHHHHhc
Confidence 4899999999999988885 666 599999999999999999986 6799999999999999999999866
Q ss_pred CCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC-----CCCCCH
Q 024418 165 GESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI-----ILLTAA 238 (268)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~-----~~~ES~ 238 (268)
..++.++++|+| +|| .| +|++.+++.+. + . +..|..++ +.+||+
T Consensus 70 ---------------------~~~~~~~~~L~E~~~G-~~-----eG~~~~e~~~~-~-~-~~~~~~~~~~~~~p~gEs~ 119 (204)
T TIGR03848 70 ---------------------GLPPRVDERLGECDYG-DW-----TGRELKELAKE-P-L-WPVVQAHPSAAVFPGGESL 119 (204)
T ss_pred ---------------------CCCceECcccccCCCC-ee-----CCcCHHHHhCc-H-H-HHHHhcCcccCCCCCCCCH
Confidence 246888999999 999 99 99999998753 1 1 22232222 445999
Q ss_pred HHHHhhhc--cc-c-c------cCCCEEEEEeCCccccC
Q 024418 239 SSSACRGF--IH-V-T------REEASASITLFSQQSTL 267 (268)
Q Consensus 239 ~~~~~Rv~--L~-~-~------~~~~~IlIVsHgg~i~l 267 (268)
.++.+|+. ++ + + .++++|+|||||++|+.
T Consensus 120 ~~~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg~~ir~ 158 (204)
T TIGR03848 120 AQVQARAVAAVREHDARLAAEHGPDAVWVACSHGDVIKS 158 (204)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCEEEEEeCChHHHH
Confidence 99999999 55 2 1 25679999999999863
No 17
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=5e-30 Score=216.14 Aligned_cols=179 Identities=38% Similarity=0.612 Sum_probs=155.2
Q ss_pred hccccccCCccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHH
Q 024418 75 AKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTL 154 (268)
Q Consensus 75 ~~~~~~~~~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~ 154 (268)
+.+++|..+.|.||||||||..+|+.|.-.+++|++..+.|+.||+.|++|+.+++..+.+.++...++.|++|||+||+
T Consensus 5 ~i~l~t~~r~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtL 84 (248)
T KOG4754|consen 5 GIGLYTKNRCKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTL 84 (248)
T ss_pred ccCccccCcceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999888876779999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCcccccccCCCCcEEeccchhhhhcccCCcCCCCCCChhhHHHhCCCCcccccccCC-C
Q 024418 155 QTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI-I 233 (268)
Q Consensus 155 QTA~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~-~ 233 (268)
||+.+.++.. ...+|.+..|+++. ++++ ..+||.+| .| +||.|++..++.+.||..||+....+. +
T Consensus 85 qT~v~~f~~~--~~e~g~~~~p~~vs------p~~i--~~~rE~lG-~h--pCD~r~~v~~~~~lfp~~DFs~~~~dv~~ 151 (248)
T KOG4754|consen 85 QTMVIAFGGY--LAEDGEDPAPVKVS------PPFI--AVCRETLG-DH--PCDRRSSVTDLMKLFPAYDFSLCETDVDP 151 (248)
T ss_pred HHHHHHhcce--eccCCCcCCceeec------chHH--HHHHHHhC-CC--cccccchhHHHHhhcccccceeeccCcch
Confidence 9999999977 45667766665432 2222 22699999 88 999999999999999999998887664 3
Q ss_pred CC-----CCHHHHHhhhc--cc--cccCCCEEEEEeCCcccc
Q 024418 234 LL-----TAASSSACRGF--IH--VTREEASASITLFSQQST 266 (268)
Q Consensus 234 ~~-----ES~~~~~~Rv~--L~--~~~~~~~IlIVsHgg~i~ 266 (268)
.| |+.++...|-. ++ +.++.+.|.||||+|.+.
T Consensus 152 ~~~pdy~ed~e~~a~r~re~~~~l~~r~ek~iavvths~fl~ 193 (248)
T KOG4754|consen 152 LKKPDYREDDEESAARSREFLEWLAKRPEKEIAVVTHSGFLR 193 (248)
T ss_pred hccCcchhhHHHHHHhHHHHHHHHHhCccceEEEEEehHHHH
Confidence 34 99999999998 66 678899999999999875
No 18
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.96 E-value=4.4e-29 Score=205.29 Aligned_cols=145 Identities=20% Similarity=0.119 Sum_probs=116.6
Q ss_pred EEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCCC
Q 024418 86 ILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDG 165 (268)
Q Consensus 86 ~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~~ 165 (268)
+||||||||+.+|..+... |+.|.|||+.|++||+++++.|.... ..+++.|||||+.||+|||+++++.++
T Consensus 1 ~i~lvRHG~s~~n~~~~~~-------g~~d~~Lt~~G~~qa~~~a~~l~~~~-~~~~~~i~sSpl~Ra~qTa~~i~~~~~ 72 (155)
T smart00855 1 RLYLIRHGETEANREGRLT-------GWTDSPLTELGRAQAEALGELLASLG-RLRFDVIYSSPLLRARETAEALAIALG 72 (155)
T ss_pred CEEEEeCCCCcccccCeEc-------CCCCCCCCHHHHHHHHHHHHHHHhcc-CCCCCEEEeCchHHHHHHHHHHHHhcC
Confidence 4899999999999877653 45899999999999999999998631 147999999999999999999998772
Q ss_pred CCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCccccccc-CCCCCCCHHHHHh
Q 024418 166 ESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHT-CIILLTAASSSAC 243 (268)
Q Consensus 166 ~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~-~~~~~ES~~~~~~ 243 (268)
.+ ...+.|+| ++| .| +|++.+++.+.+|.. +..|.. .++.+||+.++..
T Consensus 73 ---------------------~~-~~~~~L~E~~~G-~~-----~g~~~~~~~~~~~~~-~~~~~~~~~~~gEs~~~~~~ 123 (155)
T smart00855 73 ---------------------LG-EVDPRLRERDYG-AW-----EGLTKEEERAKAWTR-PADWLGAAPPGGESLADVVE 123 (155)
T ss_pred ---------------------CC-CCChhhhhcccc-ee-----cCCcHHHHHHHHHHH-HhccCCCCCcCCCCHHHHHH
Confidence 12 36799999 999 89 999999998877654 323322 2244599999999
Q ss_pred hhc--cc-c-c---cCCCEEEEEeCCccccC
Q 024418 244 RGF--IH-V-T---REEASASITLFSQQSTL 267 (268)
Q Consensus 244 Rv~--L~-~-~---~~~~~IlIVsHgg~i~l 267 (268)
|+. ++ + . ..+++|+|||||++|+.
T Consensus 124 Rv~~~~~~i~~~~~~~~~~vlvVtHg~~ir~ 154 (155)
T smart00855 124 RLVRALEELIATHDKSGQNVLIVSHGGVIRA 154 (155)
T ss_pred HHHHHHHHHHHhcccCCCeEEEEECCccccc
Confidence 998 55 2 2 25789999999999864
No 19
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.96 E-value=3e-29 Score=234.29 Aligned_cols=148 Identities=17% Similarity=0.042 Sum_probs=126.2
Q ss_pred CCccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHH
Q 024418 82 QHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVF 161 (268)
Q Consensus 82 ~~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~ 161 (268)
.++++||||||||+.+|..++++ |+.|.|||+.|++||+.+++.|+.. .++|.|||||+.||+|||++++
T Consensus 169 ~~~~~i~LvRHGet~~n~~~~~~-------g~~D~~Lt~~G~~QA~~l~~~l~~~---~~~d~i~sSpl~Ra~qTA~~i~ 238 (372)
T PRK07238 169 GTPTRLLLLRHGQTELSVQRRYS-------GRGNPELTEVGRRQAAAAARYLAAR---GGIDAVVSSPLQRARDTAAAAA 238 (372)
T ss_pred CCceEEEEEeCCCCCcccCCeee-------CCCCCCcCHHHHHHHHHHHHHHhcc---CCCCEEEECChHHHHHHHHHHH
Confidence 35789999999999999988874 6789999999999999999999872 1699999999999999999999
Q ss_pred cCCCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC----CCCC
Q 024418 162 GGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI----ILLT 236 (268)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~----~~~E 236 (268)
+.++ .++..+++|+| +|| .| +|++.+++.+.||.. +..|..++ +.+|
T Consensus 239 ~~~~---------------------~~~~~~~~L~E~~~G-~~-----eg~~~~ei~~~~p~~-~~~w~~~~~~~~p~gE 290 (372)
T PRK07238 239 KALG---------------------LDVTVDDDLIETDFG-AW-----EGLTFAEAAERDPEL-HRAWLADTSVAPPGGE 290 (372)
T ss_pred HhcC---------------------CCcEECccceeCCCC-cc-----CCCCHHHHHHHCHHH-HHHHHhCCCCCCcCCC
Confidence 8771 46788999999 999 99 999999999999875 66665443 3459
Q ss_pred CHHHHHhhhc--cc-c--ccCCCEEEEEeCCccccC
Q 024418 237 AASSSACRGF--IH-V--TREEASASITLFSQQSTL 267 (268)
Q Consensus 237 S~~~~~~Rv~--L~-~--~~~~~~IlIVsHgg~i~l 267 (268)
|+.++.+|+. ++ + ..++++|+|||||++|+.
T Consensus 291 s~~~~~~Rv~~~l~~l~~~~~~~~vlvVtHg~~ir~ 326 (372)
T PRK07238 291 SFDAVARRVRRARDRLIAEYPGATVLVVSHVTPIKT 326 (372)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCeEEEEEChHHHHH
Confidence 9999999999 55 2 346789999999999863
No 20
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.95 E-value=7e-30 Score=208.56 Aligned_cols=144 Identities=23% Similarity=0.166 Sum_probs=118.8
Q ss_pred EEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCCC
Q 024418 86 ILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDG 165 (268)
Q Consensus 86 ~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~~ 165 (268)
+||||||||+.+|..+..+ ++.|+|||+.|++||+++++.|...+ .+++.|||||+.||+|||+++++.++
T Consensus 1 ~i~liRHg~~~~n~~~~~~-------~~~d~~Lt~~G~~qA~~~~~~l~~~~--~~~~~i~~Sp~~R~~qTA~~~~~~~~ 71 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQ-------GDSDPPLTERGREQARQLGEYLAERD--IQIDVIYSSPLRRCIQTAEIIAEGLG 71 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCG-------TTSSTGBEHHHHHHHHHHHHHHHHTT--SSCSEEEEESSHHHHHHHHHHHHHHT
T ss_pred CEEEEECCccccccCCCcC-------CCCCccccHHHHHHHHhhcccccccc--cCceEEecCCcchhhhhhchhhcccc
Confidence 6999999999999877764 66788999999999999999999543 67999999999999999999999761
Q ss_pred CCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC-----CCCCCHH
Q 024418 166 ESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI-----ILLTAAS 239 (268)
Q Consensus 166 ~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~-----~~~ES~~ 239 (268)
.++..++.|+| ++| .| +|.+..++.+.+|.. +..|..++ +.+||+.
T Consensus 72 ---------------------~~~~~~~~l~E~~~g-~~-----~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Es~~ 123 (158)
T PF00300_consen 72 ---------------------IEIIVDPRLREIDFG-DW-----EGRPFDEIEEKFPDE-FEAWWSDPYFYRPPGGESWE 123 (158)
T ss_dssp ---------------------SEEEEEGGGSCCGCG-GG-----TTSBHHHHHHHHHHH-HHHHHHHTSSCGSTTSHHHH
T ss_pred ---------------------cccccccccccccch-hh-----cccchhhHHhhhhcc-cchhhccccccccccCCCHH
Confidence 47899999999 889 77 899999999988743 44444322 3349999
Q ss_pred HHHhhhc--cc--c--ccCCCEEEEEeCCcccc
Q 024418 240 SSACRGF--IH--V--TREEASASITLFSQQST 266 (268)
Q Consensus 240 ~~~~Rv~--L~--~--~~~~~~IlIVsHgg~i~ 266 (268)
++..|+. ++ . ..++++|+|||||++|+
T Consensus 124 ~~~~R~~~~~~~l~~~~~~~~~vliVsHg~~i~ 156 (158)
T PF00300_consen 124 DFQQRVKQFLDELIAYKRPGENVLIVSHGGFIR 156 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSEEEEEE-HHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHH
Confidence 9999999 66 3 46899999999999986
No 21
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.94 E-value=5.6e-27 Score=201.23 Aligned_cols=150 Identities=19% Similarity=0.081 Sum_probs=125.1
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcC
Q 024418 84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 163 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~ 163 (268)
..++++||||||.||..+.++ |+.|.+||+.|.+||+++++.|...+ ..++.+||||++||+|||+.|++.
T Consensus 5 ~~~lvlvRHGes~wN~e~~~~-------G~~D~~Lte~G~~qA~~~~~~l~~~~--~~~~~~~tS~l~RakqT~~~il~~ 75 (214)
T KOG0235|consen 5 TFRLVLVRHGESEWNKENIFQ-------GWIDAPLTEKGEEQAKAAAQRLKDLN--IEFDVCYTSDLKRAKQTAELILEE 75 (214)
T ss_pred ceEEEEEecCchhhhhhCccc-------ccccCccChhhHHHHHHHHHHHHhcC--CcccEEecCHHHHHHHHHHHHHHh
Confidence 468999999999999999995 89999999999999999999999976 568889999999999999999998
Q ss_pred CCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcc-ccccc-----C-CCCC
Q 024418 164 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSF-NFQHT-----C-IILL 235 (268)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~-~~~~~-----~-~~~~ 235 (268)
.. ....|+...++|+| +|| .+ +|+...|+.+.++...+ ..+.. + .+..
T Consensus 76 ~~------------------~~~~pv~~~~~L~ER~yG-~l-----~Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~ 131 (214)
T KOG0235|consen 76 LK------------------QKKVPVLYTWRLNERHYG-DL-----QGLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDG 131 (214)
T ss_pred hc------------------cCCcceEechhhchhhhc-cc-----cCccHHHHHHHcchhccccchhhccCCcCCCCCC
Confidence 72 12358999999999 999 99 99999999999884321 22211 1 1344
Q ss_pred CCHHHHHhhhc--cc-----cccCCCEEEEEeCCcccc
Q 024418 236 TAASSSACRGF--IH-----VTREEASASITLFSQQST 266 (268)
Q Consensus 236 ES~~~~~~Rv~--L~-----~~~~~~~IlIVsHgg~i~ 266 (268)
||..++.+|+. ++ ....+++|+||+||.+++
T Consensus 132 EsL~~~~~R~~~~~~e~i~~~~~~gk~Vli~aHGnsLR 169 (214)
T KOG0235|consen 132 ESLKDCLDRLLPFWNEEIAKESKEGKNVLIVAHGNSLR 169 (214)
T ss_pred ccHHHHHHHHHHHHHHhhhhhhcCCcEEEEEcCcHHHH
Confidence 99999999999 55 335779999999997653
No 22
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.93 E-value=2e-26 Score=229.57 Aligned_cols=160 Identities=13% Similarity=-0.019 Sum_probs=122.5
Q ss_pred cEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 85 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 85 ~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
++|||||||||.+|..++++ | |+|||+.|++||+++++.|+... ...++.|||||++||+|||+++.+..
T Consensus 420 m~i~LiRHGeT~~n~~~r~~-------G--d~pLt~~G~~qA~~l~~~l~~~~-~~~~~~V~sSpl~Ra~~TA~~i~~~~ 489 (664)
T PTZ00322 420 MNLYLTRAGEYVDLLSGRIG-------G--NSRLTERGRAYSRALFEYFQKEI-STTSFTVMSSCAKRCTETVHYFAEES 489 (664)
T ss_pred ceEEEEecccchhhhcCccC-------C--CCccCHHHHHHHHHHHHHHHhcc-CCCCcEEEcCCcHHHHHHHHHHHhcc
Confidence 58999999999999999985 4 89999999999999999998631 02467999999999999999997642
Q ss_pred CCCCCCCC-CCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC-----CCCCC
Q 024418 165 GESQTDGI-DAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI-----ILLTA 237 (268)
Q Consensus 165 ~~~~~~~~-~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~-----~~~ES 237 (268)
. ....+. .+.+ .......++..+++|+| +|| .| +|++.+|+.+.||+. +..|..++ +.+||
T Consensus 490 ~-~~~~~~~~a~~----~~~~~~~~~~~~~~L~Ei~fG-~w-----EG~t~~ei~~~~p~~-~~~~~~d~~~~~~P~GES 557 (664)
T PTZ00322 490 I-LQQSTASAASS----QSPSLNCRVLYFPTLDDINHG-DC-----EGQLLSDVRRTMPNT-LQSMKADPYYTAWPNGEC 557 (664)
T ss_pred c-ccccccccccc----ccccccccccchhhhCcCCCc-cc-----CCCCHHHHHHhCcHH-HHHHHhCCCcCCCCCCcC
Confidence 0 000000 0000 00011236778999999 999 99 999999999999986 88887665 34599
Q ss_pred HHHHH-hhhc--cc-cccCCCEEEEEeCCcccc
Q 024418 238 ASSSA-CRGF--IH-VTREEASASITLFSQQST 266 (268)
Q Consensus 238 ~~~~~-~Rv~--L~-~~~~~~~IlIVsHgg~i~ 266 (268)
+.++. .|+. ++ +.+..++||||||||+|+
T Consensus 558 ~~d~~~~R~~~~i~~l~~~~~~ilvVsHg~vir 590 (664)
T PTZ00322 558 IHQVFNARLEPHIHDIQASTTPVLVVSHLHLLQ 590 (664)
T ss_pred HHHHHHHHHHHHHHHHHccCCCEEEEeCcHHHH
Confidence 99976 7998 55 544557899999999986
No 23
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.4e-25 Score=188.51 Aligned_cols=150 Identities=18% Similarity=0.103 Sum_probs=127.0
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcC
Q 024418 84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 163 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~ 163 (268)
|++++|+|||||+||..+.+ +||.|.+||++|.+||...|+.|++.+ ..||.+|||-+.||++|..++++.
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlF-------tGW~Dv~LtekG~~EA~~ag~llk~~~--~~~dia~TS~L~RAi~T~~i~L~e 71 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLF-------TGWVDVDLTEKGISEAKAAGKLLKEEG--LEFDIAYTSVLKRAIKTLNIVLEE 71 (230)
T ss_pred CceEEEEecCchhhhhcCce-------eeeeecCcchhhHHHHHHHHHHHHHcC--CCcceeehHHHHHHHHHHHHHhhh
Confidence 46899999999999999998 599999999999999999999999988 579999999999999999999998
Q ss_pred CCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC----C-----
Q 024418 164 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI----I----- 233 (268)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~----~----- 233 (268)
.++ ...|+....+|.| +|| .+ +|++..+..+.|.+..+..|..+. +
T Consensus 72 ~d~------------------~~ipv~kswrLNERhYG-~L-----qGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~ 127 (230)
T COG0588 72 SDQ------------------LWIPVIKSWRLNERHYG-AL-----QGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKD 127 (230)
T ss_pred hcc------------------cCcchhhHHHhhhhhhh-hh-----hcCChHHHHHHHhHHHHHHHHHhcCCCCCCcccc
Confidence 731 2356777889999 999 98 999999999988765444443322 1
Q ss_pred ----------------CC----CCHHHHHhhhc--cc-----cccCCCEEEEEeCCcccc
Q 024418 234 ----------------LL----TAASSSACRGF--IH-----VTREEASASITLFSQQST 266 (268)
Q Consensus 234 ----------------~~----ES~~~~~~Rv~--L~-----~~~~~~~IlIVsHgg~i~ 266 (268)
.. ||..+...|+. ++ .-..+++|+||+||.+++
T Consensus 128 ~~~~~~~d~ry~~~~~~~~p~~EsLkdt~~Rv~Pyw~~~I~p~l~~Gk~VlI~AHGNSlR 187 (230)
T COG0588 128 DERSPHRDRRYAHLDIGGLPLTESLKDTVERVLPYWEDDIAPNLKSGKNVLIVAHGNSLR 187 (230)
T ss_pred cccccccccccccccccCCCccchHHHHHHHhhHHHHHHhhHHHhCCCeEEEEecchhHH
Confidence 11 99999999999 54 235899999999999875
No 24
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.91 E-value=1.2e-24 Score=191.68 Aligned_cols=138 Identities=18% Similarity=0.103 Sum_probs=109.3
Q ss_pred CCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 024418 97 HNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHP 176 (268)
Q Consensus 97 ~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~~~~~~~~~~~~p 176 (268)
+|..++++ |+.|.|||++|++||+++++.|+..+ .+++.|||||+.||+|||+++++.++
T Consensus 1 ~N~~~~~q-------G~~D~pLTe~G~~QA~~l~~~L~~~~--~~~d~iysSpl~Ra~qTA~~i~~~~~----------- 60 (236)
T PTZ00123 1 WNKENRFT-------GWTDVPLSEKGVQEAREAGKLLKEKG--FRFDVVYTSVLKRAIKTAWIVLEELG----------- 60 (236)
T ss_pred CcccCcee-------CCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECChHHHHHHHHHHHHhcC-----------
Confidence 46677774 78999999999999999999998654 46999999999999999999998661
Q ss_pred cccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccC------------------------
Q 024418 177 SLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTC------------------------ 231 (268)
Q Consensus 177 ~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~------------------------ 231 (268)
....+++.+++|+| +|| .| +|++.+++.+.+|+..+..|..+
T Consensus 61 -------~~~~~~~~~~~L~E~~~G-~~-----EG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (236)
T PTZ00123 61 -------QLHVPVIKSWRLNERHYG-AL-----QGLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKD 127 (236)
T ss_pred -------CCCCCceeCchhhhcccc-cc-----cCCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhc
Confidence 01236788999999 999 99 99999999988875312222111
Q ss_pred -----CCCCCCHHHHHhhhc--cc--c---ccCCCEEEEEeCCccccC
Q 024418 232 -----IILLTAASSSACRGF--IH--V---TREEASASITLFSQQSTL 267 (268)
Q Consensus 232 -----~~~~ES~~~~~~Rv~--L~--~---~~~~~~IlIVsHgg~i~l 267 (268)
.+..||+.++..|+. |+ . ..++++|||||||++|+.
T Consensus 128 ~~~~~~p~gES~~~~~~Rv~~~l~~li~~~~~~~~~vliVsHG~vir~ 175 (236)
T PTZ00123 128 IPKDALPNTECLKDTVERVLPYWEDHIAPDILAGKKVLVAAHGNSLRA 175 (236)
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCHHHHHH
Confidence 123499999999998 65 2 235789999999999863
No 25
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.84 E-value=7e-21 Score=172.92 Aligned_cols=134 Identities=19% Similarity=0.102 Sum_probs=89.5
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCC----CCCcCEEEEcChHHHHHHHH
Q 024418 83 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGL----TQKIDLVITSPLLRTLQTAV 158 (268)
Q Consensus 83 ~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~----~~~~d~IysSPl~Ra~QTA~ 158 (268)
..++||||||||+..+ +.. ...+.+||+.|++||+++|+.|++... ..++++|||||+.||+|||+
T Consensus 101 ~~~~L~LVRHGq~~~~--~~~--------d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAe 170 (299)
T PTZ00122 101 HQRQIILVRHGQYINE--SSN--------DDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAE 170 (299)
T ss_pred ceeEEEEEECCCCCCC--CCC--------CcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHH
Confidence 3489999999995443 211 112235999999999999999987311 01699999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCCcccccccCCCCcEEeccchhhhhcccCCcCCCCCCChhhHHHhCCCCcccccccCCCCCCCH
Q 024418 159 GVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILLTAA 238 (268)
Q Consensus 159 ~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~~~~ES~ 238 (268)
+|++.+ +..++..+++|+| | + +..+. |. ...+ .+..|+.
T Consensus 171 iIa~~~--------------------~~~~v~~d~~LrE--G--~--~~~~~----------~~--~~~~---~~~gee~ 209 (299)
T PTZ00122 171 IISEAF--------------------PGVRLIEDPNLAE--G--V--PCAPD----------PP--SRGF---KPTIEEI 209 (299)
T ss_pred HHHHhC--------------------CCCCceeCccccc--C--C--ccccC----------cc--cccc---CCCcchH
Confidence 999865 1246888999999 2 1 00000 10 0000 0112444
Q ss_pred HHHHhhhc--cc--cc----cCCCEEEEEeCCccccC
Q 024418 239 SSSACRGF--IH--VT----REEASASITLFSQQSTL 267 (268)
Q Consensus 239 ~~~~~Rv~--L~--~~----~~~~~IlIVsHgg~i~l 267 (268)
.+..+|+. ++ .. ..++++||||||++|+.
T Consensus 210 ~~~~~Rv~~al~~i~~r~~~~~~~~vLVVsHGgvIR~ 246 (299)
T PTZ00122 210 LEDMKRIEAAFEKYFHRPVEDEDSVEIIVCHGNVIRY 246 (299)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEEEEeCChHHHH
Confidence 66688988 55 21 13467899999999863
No 26
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.82 E-value=4.5e-20 Score=150.76 Aligned_cols=70 Identities=39% Similarity=0.476 Sum_probs=61.6
Q ss_pred EEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 86 ILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 86 ~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
+|||||||++.+|..+.. .+..|.|||+.|++||+++++.|...+ .+++.|||||+.||+|||+++++.+
T Consensus 1 ~i~liRHg~~~~~~~~~~-------~~~~d~~Lt~~G~~qa~~~~~~l~~~~--~~~~~i~~Sp~~Ra~qTa~~l~~~~ 70 (153)
T cd07067 1 RLYLVRHGESEWNAEGRF-------QGWTDVPLTEKGREQARALGKRLKELG--IKFDRIYSSPLKRAIQTAEIILEEL 70 (153)
T ss_pred CEEEEECCCCcccccCcc-------cCCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECcHHHHHHHHHHHHHhc
Confidence 489999999999887654 256899999999999999999999843 3799999999999999999999865
No 27
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.75 E-value=4.9e-18 Score=150.15 Aligned_cols=164 Identities=16% Similarity=0.096 Sum_probs=113.7
Q ss_pred CccEEEEEcCCCCCCCCCCC-CCCccccC-----------------------CCCCCCCCCHhHHHHHHHHHHHHHhcCC
Q 024418 83 HCKILHLVRHGQGVHNMEGN-NGPEALLS-----------------------QEFFDAHLSPLGWQQVGNLRKRVEASGL 138 (268)
Q Consensus 83 ~~~~i~LVRHGes~~N~~~~-~~~~~~~~-----------------------~g~~D~pLT~~G~~QA~~lg~~L~~~~~ 138 (268)
..+.|++|||||+.+|..+. +-..+... .-..|+|||+.|.-|++..|+.|.+.+
T Consensus 11 ~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~- 89 (272)
T KOG3734|consen 11 VPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAG- 89 (272)
T ss_pred CCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcC-
Confidence 35689999999999987766 31111100 112489999999999999999999987
Q ss_pred CCCcCEEEEcChHHHHHHHHHHHcCCCCCCCCCCCCCCcccccccCCCCcEEeccchhhhhcccCCcCC--CCCCChhhH
Q 024418 139 TQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNAC--SVHKNQDGY 216 (268)
Q Consensus 139 ~~~~d~IysSPl~Ra~QTA~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E~~G~~~~~~~--d~g~~~~el 216 (268)
..+|.|||||..||+|||..+.+.++... ...+.++++|-|.. .|+-.. +.-.+..++
T Consensus 90 -~~i~~ifcSPs~r~VqTa~~i~~~~g~e~-----------------~~~i~vePgL~e~~--~~~~~~~~p~~is~~el 149 (272)
T KOG3734|consen 90 -IAIDVIFCSPSLRCVQTAAKIKKGLGIEK-----------------KLKIRVEPGLFEPE--KWPKDGKFPFFISPDEL 149 (272)
T ss_pred -CCcceeecCCchhHHHHHHHHHHhhchhc-----------------CeeEEecchhcchh--hhcccCCCCCcCCHHHH
Confidence 67999999999999999999999883211 24677888888821 221011 122455566
Q ss_pred HHhCCCCc--ccccccCCCCC-CCHHHHHhhhc--cc---cccCCCEEEEEeCCccccC
Q 024418 217 HMTAPYGS--FNFQHTCIILL-TAASSSACRGF--IH---VTREEASASITLFSQQSTL 267 (268)
Q Consensus 217 ~~~~p~~~--~~~~~~~~~~~-ES~~~~~~Rv~--L~---~~~~~~~IlIVsHgg~i~l 267 (268)
....+.+| +.......+.| ||.+++..|.. +. ...++++||||+||..+..
T Consensus 150 ~~~~~~VD~~y~P~~~~~~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~ 208 (272)
T KOG3734|consen 150 KFPGFPVDLNYDPVYKETPRWGESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDT 208 (272)
T ss_pred hccCCCcccccchhhhhcccccccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHH
Confidence 65544332 33333222444 99999999999 55 3447778999999987643
No 28
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.74 E-value=1.2e-17 Score=135.60 Aligned_cols=70 Identities=37% Similarity=0.444 Sum_probs=61.7
Q ss_pred EEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 86 ILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 86 ~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
++||||||++.++..+.. .+..|.|||++|++||+.+++.|+... .+++.|||||+.||+|||++++..+
T Consensus 1 ~i~liRHg~~~~~~~~~~-------~~~~d~~Lt~~G~~qa~~l~~~l~~~~--~~~~~v~sSp~~R~~~Ta~~~~~~~ 70 (153)
T cd07040 1 VLYLVRHGEREPNAEGRF-------TGWGDGPLTEKGRQQARELGKALRERY--IKFDRIYSSPLKRAIQTAEIILEGL 70 (153)
T ss_pred CEEEEeCCCCccccCCCc-------cCCCCCCcCHHHHHHHHHHHHHHHHhC--CCCCEEEECChHHHHHHHHHHHHHh
Confidence 489999999999887654 256899999999999999999999843 3789999999999999999999876
No 29
>PRK06193 hypothetical protein; Provisional
Probab=99.72 E-value=4.2e-17 Score=140.31 Aligned_cols=81 Identities=23% Similarity=0.253 Sum_probs=63.3
Q ss_pred ccCCccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHH
Q 024418 80 SLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVG 159 (268)
Q Consensus 80 ~~~~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~ 159 (268)
......+||||||||+.+|..+...+.. .....|.|||++|++||+.+++.|++.+ .++|.|||||+.||+|||++
T Consensus 38 ~l~~~~~L~LvRHGet~~n~~~~~~gd~--d~~~~~rpLt~~G~~qA~~l~~~L~~~~--~~~d~V~sSpl~Ra~qTA~i 113 (206)
T PRK06193 38 SLQKGGYVIYFRHAATDRSQADQDTSDM--DDCSTQRNLSEEGREQARAIGEAFRALA--IPVGKVISSPYCRAWETAQL 113 (206)
T ss_pred HHhcCCEEEEEeCccCCCCccCCccccc--ccCcCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECCcHHHHHHHHH
Confidence 3455689999999999988766543100 0011257999999999999999999755 56899999999999999999
Q ss_pred HHcCC
Q 024418 160 VFGGD 164 (268)
Q Consensus 160 i~~~~ 164 (268)
++...
T Consensus 114 l~~~~ 118 (206)
T PRK06193 114 AFGRH 118 (206)
T ss_pred Hhccc
Confidence 87543
No 30
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.71 E-value=5.7e-17 Score=133.58 Aligned_cols=67 Identities=22% Similarity=0.244 Sum_probs=59.1
Q ss_pred cEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 85 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 85 ~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
|+|||||||++.++.. +..|.|||++|++||+.+++.|+..+ ..+|.|||||+.||+|||+++++.+
T Consensus 1 m~l~LvRHg~a~~~~~-----------~d~dr~Lt~~G~~qa~~~~~~l~~~~--~~~d~i~sSp~~Ra~qTa~~l~~~~ 67 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA-----------SDSVRPLTTNGCDESRLVAQWLKGQG--VEIERILVSPFVRAEQTAEIVGDCL 67 (152)
T ss_pred CEEEEEeCCCcccccC-----------CCCCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEECCcHHHHHHHHHHHHHc
Confidence 4799999999988764 23588999999999999999998754 4689999999999999999999876
No 31
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.67 E-value=3.5e-16 Score=133.75 Aligned_cols=81 Identities=17% Similarity=0.126 Sum_probs=61.7
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHc
Q 024418 83 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 162 (268)
Q Consensus 83 ~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~ 162 (268)
..++||||||||+.+...+.. ...+.|||++|++||+++++.|++.. ..|.|||||+.||+|||+++++
T Consensus 53 ~~~~L~LiRHGet~~~~~~~~--------~sD~RpLTerG~~qA~~lg~~L~~~~---~~d~I~sSpa~Ra~qTAe~ia~ 121 (201)
T PRK15416 53 QHPVVVLFRHAERCDRSDNQC--------LSDKTGITVKGTQDARELGKAFSADI---PDYDLYSSNTVRTIQSATWFSA 121 (201)
T ss_pred CCCEEEEEeCccccCccCCCC--------CCCCCCCCHHHHHHHHHHHHHHhCCC---CCCEEEECCCHHHHHHHHHHhc
Confidence 346799999999832221211 11226899999999999999998632 3489999999999999999987
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCcEEeccchhh
Q 024418 163 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRE 197 (268)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E 197 (268)
.. ++..+++|.|
T Consensus 122 ~~-----------------------~v~~~~~Lye 133 (201)
T PRK15416 122 GK-----------------------KLTVDKRLSD 133 (201)
T ss_pred CC-----------------------CcEecHHHhh
Confidence 33 4677888888
No 32
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.63 E-value=7.5e-16 Score=127.86 Aligned_cols=67 Identities=21% Similarity=0.186 Sum_probs=58.4
Q ss_pred cEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 85 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 85 ~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
|+|||||||++.+|.. +..|.|||++|++||+.+++.|...+ ..+|.|||||+.||+|||+++++..
T Consensus 1 m~l~lvRHg~a~~~~~-----------~d~~rpLt~~G~~qa~~~~~~l~~~~--~~~d~i~sSp~~Ra~qTa~~l~~~~ 67 (159)
T PRK10848 1 MQVFIMRHGDAALDAA-----------SDSVRPLTTCGCDESRLMANWLKGQK--VDIERVLVSPYLRAEQTLEVVGECL 67 (159)
T ss_pred CEEEEEeCCCCCCCCC-----------CCcCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEECCHHHHHHHHHHHHHHh
Confidence 4799999999988743 23578999999999999999998754 4689999999999999999998876
No 33
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.60 E-value=2.9e-15 Score=124.03 Aligned_cols=70 Identities=30% Similarity=0.308 Sum_probs=63.4
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcC
Q 024418 84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG 163 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~ 163 (268)
|++|||+|||++.+...+. ...|-+||++|++||+.+|+.|+..+ ..+|.|+|||..||+|||+.+++.
T Consensus 1 m~~L~LmRHgkA~~~~~~~---------~D~dR~Lt~~G~~ea~~~a~~L~~~~--~~~D~VL~Spa~Ra~QTae~v~~~ 69 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPGI---------ADFDRPLTERGRKEAELVAAWLAGQG--VEPDLVLVSPAVRARQTAEIVAEH 69 (163)
T ss_pred CceEEEeecccccccCCCC---------CCccCcCCHHHHHHHHHHHHHHHhcC--CCCCEEEeChhHHHHHHHHHHHHh
Confidence 5799999999999977653 23689999999999999999999987 479999999999999999999998
Q ss_pred C
Q 024418 164 D 164 (268)
Q Consensus 164 ~ 164 (268)
+
T Consensus 70 ~ 70 (163)
T COG2062 70 L 70 (163)
T ss_pred h
Confidence 8
No 34
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.57 E-value=6.1e-15 Score=137.58 Aligned_cols=140 Identities=25% Similarity=0.151 Sum_probs=112.7
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcC-EEEEcChHHHHHHHHHHHc
Q 024418 84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKID-LVITSPLLRTLQTAVGVFG 162 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d-~IysSPl~Ra~QTA~~i~~ 162 (268)
.+.|||.||||+..|+.|+.. .|.+|+++|.+=|+.+.+.+.... ..| .||||++.||+|||+.+--
T Consensus 239 pR~i~l~r~geS~~n~~grig---------gds~ls~~g~~ya~~l~~f~~~~~---~~dl~vwts~~~rti~ta~~l~~ 306 (438)
T KOG0234|consen 239 PRTIYLTRHGESEFNVEGRIG---------GDSPLSERGSQYAKSLIKFVEEQS---SSDLDVWTSQRKRTIQTAEGLKL 306 (438)
T ss_pred CceEEEEecCCCccccccccC---------CcccccHHHHHHHHHHHHHHhhhc---ccCceeccchHHHHhhhHhhcCc
Confidence 468999999999999999864 599999999999999999998753 345 8999999999999993322
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC-----CCCC
Q 024418 163 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI-----ILLT 236 (268)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~-----~~~E 236 (268)
.. .+.....|+| +.| .. +|++.+++.+.||.. +..-..++ +..|
T Consensus 307 ~~-----------------------~~~~~~~Ldei~ag-~~-----~g~t~eeI~~~~p~e-~~~r~~dky~yry~~gE 356 (438)
T KOG0234|consen 307 DY-----------------------SVEQWKALDEIDAG-VC-----EGLTYEEIETNYPEE-FALRDKDKYRYRYPGGE 356 (438)
T ss_pred ch-----------------------hhhhHhhcCccccc-cc-----ccccHHHHHHhCchh-hhhccCCcceeecCCCC
Confidence 11 1345678999 999 66 899999999999975 65555555 2339
Q ss_pred CHHHHHhhhc---cccccCCCEEEEEeCCcccc
Q 024418 237 AASSSACRGF---IHVTREEASASITLFSQQST 266 (268)
Q Consensus 237 S~~~~~~Rv~---L~~~~~~~~IlIVsHgg~i~ 266 (268)
|+.|+..|+. ++..+... |+|++|..+|+
T Consensus 357 Sy~D~v~RlePvImElEr~~~-Vlvi~Hqavir 388 (438)
T KOG0234|consen 357 SYSDLVQRLEPVIMELERQEN-VLVITHQAVIR 388 (438)
T ss_pred CHHHHHHhhhhHhHhhhhccc-EEEEecHHHHH
Confidence 9999999999 34666656 99999998874
No 35
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.53 E-value=2.8e-14 Score=121.18 Aligned_cols=131 Identities=21% Similarity=0.201 Sum_probs=89.1
Q ss_pred CccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHc
Q 024418 83 HCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 162 (268)
Q Consensus 83 ~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~ 162 (268)
..+.|+||||||=.. . |..| .||+.|++||+.+|++|++.| .++|.|+.|.|.||.+||.+|++
T Consensus 93 atRhI~LiRHgeY~~--~-----------g~~~-hLTelGReQAE~tGkRL~elg--lk~d~vv~StM~RA~ETadIIlk 156 (284)
T KOG4609|consen 93 ATRHIFLIRHGEYHV--D-----------GSLE-HLTELGREQAELTGKRLAELG--LKFDKVVASTMVRATETADIILK 156 (284)
T ss_pred hhceEEEEeccceec--c-----------Cchh-hcchhhHHHHHHHhHHHHHcC--CchhhhhhhhhhhhHHHHHHHHH
Confidence 346899999998322 1 2234 899999999999999999998 68999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCcEEeccchhhhhcccCCcCCCCCCChhhHHHhCCCCcccccccCCCCC----CCH
Q 024418 163 GDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILL----TAA 238 (268)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~~~~----ES~ 238 (268)
++. ........+.|+| .-|++.+ -+...|....+.| --.
T Consensus 157 ~l~-------------------d~lk~~s~~ll~E----GaP~ppd--------------Pp~k~wrp~~~qy~rdgaRI 199 (284)
T KOG4609|consen 157 HLP-------------------DDLKRVSCPLLRE----GAPYPPD--------------PPVKHWRPLDPQYYRDGARI 199 (284)
T ss_pred hCC-------------------Cccceeccccccc----CCCCCCC--------------CCcccCCccChHhhhcchHH
Confidence 982 1234556677888 2222222 1233444333333 122
Q ss_pred HHHHhhhccc---cccCCCEEEEEeCCcccc
Q 024418 239 SSSACRGFIH---VTREEASASITLFSQQST 266 (268)
Q Consensus 239 ~~~~~Rv~L~---~~~~~~~IlIVsHgg~i~ 266 (268)
+....|...+ .+..+.--|||+|+.||+
T Consensus 200 EaafRryfhRA~p~QeedSy~liV~HaNVIR 230 (284)
T KOG4609|consen 200 EAAFRRYFHRASPSQEEDSYELIVCHANVIR 230 (284)
T ss_pred HHHHHHHHhhcCcccccccEEEEEeecchhh
Confidence 3333333322 334556789999999986
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=98.03 E-value=1.1e-05 Score=70.69 Aligned_cols=62 Identities=27% Similarity=0.311 Sum_probs=50.0
Q ss_pred cEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcC--------CCCCcCEEEEcChHHHHHH
Q 024418 85 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASG--------LTQKIDLVITSPLLRTLQT 156 (268)
Q Consensus 85 ~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~--------~~~~~d~IysSPl~Ra~QT 156 (268)
+..+++|||++.- ..||..|++|+.++|+.|++.- .....-.|++|+..||+||
T Consensus 4 ~v~~~~RHg~r~p------------------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~S 65 (242)
T cd07061 4 QVQVLSRHGDRYP------------------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQS 65 (242)
T ss_pred EEEEEEecCCCCc------------------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHH
Confidence 3578889999642 3699999999999999998631 0122337899999999999
Q ss_pred HHHHHcCC
Q 024418 157 AVGVFGGD 164 (268)
Q Consensus 157 A~~i~~~~ 164 (268)
|+.++.++
T Consensus 66 a~~~~~gl 73 (242)
T cd07061 66 AQAFLAGL 73 (242)
T ss_pred HHHHHHhc
Confidence 99999988
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=97.22 E-value=0.00091 Score=60.70 Aligned_cols=48 Identities=29% Similarity=0.296 Sum_probs=39.5
Q ss_pred CCCHhHHHHHHHHHHHHHhcC--CC-----CCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 117 HLSPLGWQQVGNLRKRVEASG--LT-----QKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 117 pLT~~G~~QA~~lg~~L~~~~--~~-----~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
.||+.|.+|...+|++|++.- +. ..--.|++|...||++||+.++.++
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl 116 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGL 116 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHH
Confidence 499999999999999998741 10 1223589999999999999999988
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=97.01 E-value=0.0027 Score=60.54 Aligned_cols=79 Identities=19% Similarity=0.190 Sum_probs=52.6
Q ss_pred cEEEEEcCCCCCC-CC---CCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHh---cC---CC--CCcC--EEEEcCh
Q 024418 85 KILHLVRHGQGVH-NM---EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEA---SG---LT--QKID--LVITSPL 150 (268)
Q Consensus 85 ~~i~LVRHGes~~-N~---~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~---~~---~~--~~~d--~IysSPl 150 (268)
..-.+.|||...- +. ...+....+...|+- .||+.|.+|+.++|+.|++ .. +. .+.+ .|.||+.
T Consensus 36 fv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~G--qLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~ 113 (411)
T KOG3720|consen 36 FVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGWG--QLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDV 113 (411)
T ss_pred EEEEEeecCCCCcccCCCCCCcccccccCCCCcc--hhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCc
Confidence 3455669998663 11 111111113334443 5999999999999999998 31 11 1122 4779999
Q ss_pred HHHHHHHHHHHcCCC
Q 024418 151 LRTLQTAVGVFGGDG 165 (268)
Q Consensus 151 ~Ra~QTA~~i~~~~~ 165 (268)
.||+.||+.++.++-
T Consensus 114 nRtl~SAqs~laGlf 128 (411)
T KOG3720|consen 114 NRTLMSAQSVLAGLF 128 (411)
T ss_pred cHHHHHHHHHHHhhC
Confidence 999999999999884
No 39
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=96.31 E-value=0.017 Score=55.20 Aligned_cols=83 Identities=18% Similarity=0.130 Sum_probs=52.2
Q ss_pred ccEEEEEcCCCCCCCCCC-----CCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhc----CCC-----CC--cCEEEE
Q 024418 84 CKILHLVRHGQGVHNMEG-----NNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEAS----GLT-----QK--IDLVIT 147 (268)
Q Consensus 84 ~~~i~LVRHGes~~N~~~-----~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~----~~~-----~~--~d~Iys 147 (268)
.+.+++.|||-+.--... ...+..+-...-..-.||.+|..|-..+|+.+++. ++. .. .-.||+
T Consensus 32 ~~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a 111 (413)
T PRK10173 32 QQVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYA 111 (413)
T ss_pred EEEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEe
Confidence 456888899965543221 11111111111223469999999999999877652 221 11 235789
Q ss_pred cChHHHHHHHHHHHcCCCC
Q 024418 148 SPLLRTLQTAVGVFGGDGE 166 (268)
Q Consensus 148 SPl~Ra~QTA~~i~~~~~~ 166 (268)
++..||++||+.++.++-.
T Consensus 112 ~~~~RT~~Sa~afl~Gl~P 130 (413)
T PRK10173 112 NSLQRTVATAQFFITGAFP 130 (413)
T ss_pred CCchHHHHHHHHHHHhcCC
Confidence 9999999999999887743
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=96.05 E-value=0.023 Score=54.48 Aligned_cols=82 Identities=20% Similarity=0.133 Sum_probs=50.8
Q ss_pred cEEEEEcCCCCCCCCCCC----CCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcC----CC-----CCcC--EEEEcC
Q 024418 85 KILHLVRHGQGVHNMEGN----NGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASG----LT-----QKID--LVITSP 149 (268)
Q Consensus 85 ~~i~LVRHGes~~N~~~~----~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~----~~-----~~~d--~IysSP 149 (268)
+.+++.|||-+.-..... +.+..+.......-.||.+|.+|...+|+++++.- +. ...+ .|++++
T Consensus 36 ~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~ 115 (436)
T PRK10172 36 SVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADV 115 (436)
T ss_pred EEEEEeeCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCC
Confidence 456777999765432211 11111100001124699999999999999887632 11 1122 567888
Q ss_pred hHHHHHHHHHHHcCCCC
Q 024418 150 LLRTLQTAVGVFGGDGE 166 (268)
Q Consensus 150 l~Ra~QTA~~i~~~~~~ 166 (268)
..||++||+.++.++-.
T Consensus 116 ~~RTi~SAqafl~GlyP 132 (436)
T PRK10172 116 DQRTRKTGEAFLAGLAP 132 (436)
T ss_pred chHHHHHHHHHHHhcCC
Confidence 89999999998887743
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=92.19 E-value=0.15 Score=51.45 Aligned_cols=48 Identities=21% Similarity=0.079 Sum_probs=39.4
Q ss_pred CCCHhHHHHHHHHHHHHHhcCC------------C-CCcCEEEEcChHHHHHHHHHHHcCC
Q 024418 117 HLSPLGWQQVGNLRKRVEASGL------------T-QKIDLVITSPLLRTLQTAVGVFGGD 164 (268)
Q Consensus 117 pLT~~G~~QA~~lg~~L~~~~~------------~-~~~d~IysSPl~Ra~QTA~~i~~~~ 164 (268)
.||..|+.||+++|+.++..-. . ..--.||+|+-.|.+.||+++++++
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 6999999999999999987421 0 0112699999999999999999987
No 42
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=82.69 E-value=3.7 Score=39.51 Aligned_cols=51 Identities=18% Similarity=0.031 Sum_probs=39.0
Q ss_pred CCCCCHhHHHHHHHHHHHHHhcC---CCCCcCEEEEcChHHHHHHHHHHHcCCC
Q 024418 115 DAHLSPLGWQQVGNLRKRVEASG---LTQKIDLVITSPLLRTLQTAVGVFGGDG 165 (268)
Q Consensus 115 D~pLT~~G~~QA~~lg~~L~~~~---~~~~~d~IysSPl~Ra~QTA~~i~~~~~ 165 (268)
+-.|...|++.|.++++.+-+.- .....-.|+++-..|+..||+..+.++.
T Consensus 130 ~~~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLf 183 (467)
T KOG1382|consen 130 VDQLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLF 183 (467)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhc
Confidence 44677889999999988876531 1123346899999999999999999984
No 43
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=43.20 E-value=50 Score=29.19 Aligned_cols=45 Identities=11% Similarity=-0.023 Sum_probs=30.8
Q ss_pred CCChhhHHHhCCCCcccccccCCCCCCCHHHHHhhhc--cccccCCCEEEEEeCCccccC
Q 024418 210 HKNQDGYHMTAPYGSFNFQHTCIILLTAASSSACRGF--IHVTREEASASITLFSQQSTL 267 (268)
Q Consensus 210 g~~~~el~~~~p~~~~~~~~~~~~~~ES~~~~~~Rv~--L~~~~~~~~IlIVsHgg~i~l 267 (268)
.++..++++.|+ + +|++|..+|+. +....+++..++|+|+++..+
T Consensus 114 ~~~~~~vr~~fg-i------------~s~~eA~~~ive~~~~~~~~~~~VliaH~~~~G~ 160 (238)
T cd07397 114 WLSKKAVKAVYG-V------------ISLEESAQRIIAAAKKAPPDLPLILLAHNGPSGL 160 (238)
T ss_pred ccCHHHHHHHhC-C------------CCHHHHHHHHHHHhhhcCCCCCeEEEeCcCCcCC
Confidence 345556777766 2 78888888887 542235566899999987543
No 44
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=30.38 E-value=74 Score=30.35 Aligned_cols=47 Identities=23% Similarity=0.133 Sum_probs=35.6
Q ss_pred CCCHhHHHHHHHHHHHHHhcCC---------CCCcC--EEEEcChHHHHHHHHHHHcC
Q 024418 117 HLSPLGWQQVGNLRKRVEASGL---------TQKID--LVITSPLLRTLQTAVGVFGG 163 (268)
Q Consensus 117 pLT~~G~~QA~~lg~~L~~~~~---------~~~~d--~IysSPl~Ra~QTA~~i~~~ 163 (268)
.||.+|..|--.+|+.++..-. ....+ .|+|+-+.||.|.|-.+.=.
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf~ 225 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLFL 225 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHHH
Confidence 6899999999999998876311 01233 38999999999999887443
No 45
>PF05374 Mu-conotoxin: Mu-Conotoxin; InterPro: IPR008036 This entry represents Mu-type conotoxins. Cone snail toxins, conotoxins, are small peptides with disulphide connectivity, that target ion-channels or G-protein coupled receptors. Based on the number and pattern of disulphide bonds and biological activities, conotoxins can be classified into several families []. Omega, delta and kappa families of conotoxins have a knottin or inhibitor cystine knot scaffold. The knottin scaffold is a very special disulphide through disulphide knot, in which the III-VI disulphide bond crosses the macrocycle formed by two other disulphide bonds (I-IV and II-V) and the interconnecting backbone segments, where I-VI indicates the six cysteine residues starting from the N terminus. The disulphide bonding network as well as specific amino acids in inter-cysteine loops provide specificity of conotoxin []. The cysteine arrangement is the same for omega, delta and kappa families, but omega conotoxins are calcium channel blockers, whereas delta conotoxins delay the inactivation of sodium channels and kappa conotoxins are potassium channel blockers []. Mu conotoxins have two types of cysteine arrangement, but the knottin scaffold is not observed. Conotoxin gm9a, a putative 27-residue polypeptide encoded by Conus gloriamaris, has been shown to adopt an inhibitory cystine knot motif constrained by three disulphide bonds [, ].Mu conotoxins target the voltage-gated sodium channels, preferential skeletal muscle [], and are useful probes for investigating voltage-dependent sodium channels of excitable tissues []. Alpha conotoxins have two types of cysteine arrangement [] and are competitive nicotinic acetylcholine receptor antagonists. ; GO: 0019871 sodium channel inhibitor activity, 0009405 pathogenesis, 0005576 extracellular region; PDB: 1R9I_A 1GIB_A 1TCJ_A 1TCG_A 1TCK_A 1TCH_A.
Probab=28.23 E-value=29 Score=18.77 Aligned_cols=12 Identities=33% Similarity=0.642 Sum_probs=9.5
Q ss_pred cccccccccCce
Q 024418 31 ICCKLPLASNSI 42 (268)
Q Consensus 31 ~~~~~~~~~~~~ 42 (268)
.||+.|+.-+|.
T Consensus 2 ~CC~~Pk~CksR 13 (22)
T PF05374_consen 2 DCCGPPKSCKSR 13 (22)
T ss_dssp TSSSSSTGGCSG
T ss_pred cccCCCcccccc
Confidence 589999887764
No 46
>PF04270 Strep_his_triad: Streptococcal histidine triad protein ; InterPro: IPR006270 This entry represents a repeated sequence region that includes a His-X-X-His-X-His (histidine triad) motif, which is found in family of Streptococcal proteins. Members of the family are suggested to cleave human complement component 3, and family member PhpA has been shown in vaccine studies to be a protective antigen in mice []. ; PDB: 2CS7_C.
Probab=26.67 E-value=35 Score=22.97 Aligned_cols=31 Identities=19% Similarity=0.169 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHH
Q 024418 86 ILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLR 130 (268)
Q Consensus 86 ~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg 130 (268)
.=|.||||--.+-.. -..||+..+++|++..
T Consensus 20 ~gy~vpHgdH~HyI~--------------k~dLs~~E~~aA~~~~ 50 (53)
T PF04270_consen 20 DGYVVPHGDHFHYIP--------------KSDLSASELKAAQAYL 50 (53)
T ss_dssp SEEEEEETTEEEEEE--------------GGGS-HHHHHHHHHHH
T ss_pred CeEEeeCCCcccCCc--------------hhhCCHHHHHHHHHHH
Confidence 468999996444322 2369999988888653
Done!