BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024420
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster
GN=CG3714 PE=2 SV=2
Length = 555
Score = 323 bits (828), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 154/266 (57%), Positives = 193/266 (72%), Gaps = 16/266 (6%)
Query: 2 RSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSIT 61
RSG+ NF AVALALNDLGY A+GIR+DSGDLAYLSC AR+ F + + F VP F K++I
Sbjct: 305 RSGLLNFSAVALALNDLGYHALGIRIDSGDLAYLSCLARETFEKVAERFKVPWFNKLTIV 364
Query: 62 ASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVS 121
ASND+NE+T+ +LN+QGH++D FGIGT+LVTC Q ALGCV+KLVEIN QPRIKLS+DV
Sbjct: 365 ASNDINEDTILSLNEQGHKIDCFGIGTHLVTCQRQPALGCVYKLVEINGQPRIKLSQDVE 424
Query: 122 KVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEE 181
KV++P K +YRLY +G+ L+D++ +EPPP VG+++LCRHPF ESKRAYV+P VE
Sbjct: 425 KVTMPGNKNAYRLYSADGHALIDLLQKVSEPPPAVGQKVLCRHPFQESKRAYVIPSHVES 484
Query: 182 LLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTP 241
L K YW K + LPTL+ RE+ L+ +R DH R LNPTP
Sbjct: 485 LYKVYWKSG----------------KICQQLPTLEQVREKVQISLKTLRNDHKRTLNPTP 528
Query: 242 YKVSVSAKLYDFIHFLWLNEAPVGEL 267
YKV+VS LY+FIH LWL AP+GEL
Sbjct: 529 YKVAVSDNLYNFIHDLWLQNAPIGEL 554
>sp|Q55G10|PNCB_DICDI Nicotinate phosphoribosyltransferase OS=Dictyostelium discoideum
GN=naprt PE=2 SV=1
Length = 589
Score = 290 bits (743), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 143/275 (52%), Positives = 191/275 (69%), Gaps = 23/275 (8%)
Query: 1 MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSI 60
+ SGVPNF VALAL+ LGYKAVGIRLDSGDL+YLS +RK F+ I ++F + FEK SI
Sbjct: 331 LASGVPNFICVALALHQLGYKAVGIRLDSGDLSYLSKASRKLFKQIGEQFKIDYFEKFSI 390
Query: 61 TASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDV 120
ASNDLNE T+ ALN+QGHE+D F IGT LVTC AQ ALGCV+KLVEIN PRIKLS++
Sbjct: 391 VASNDLNEPTIIALNRQGHEIDVFAIGTNLVTCQAQPALGCVYKLVEINGSPRIKLSQEA 450
Query: 121 SKVSIPCKKRSYRLYGKEGYPLVDIMTGENE-------PPPKVGERILCRHPFNESKRAY 173
+K+++P +K +YRL+G EG+PLVD++ +N+ P+VG+++LC HPF E KR
Sbjct: 451 NKITLPGRKTAYRLFGSEGHPLVDLLVDDNDMIKDGSKQIPQVGKKVLCLHPFEEQKRVI 510
Query: 174 VVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDH 233
V P ++E+L + +VF Q LP L D RE C +Q+ ++R DH
Sbjct: 511 VTPVQIEKL------------HHIVFEKGQL----TMPLPALNDIREYCFQQISKVREDH 554
Query: 234 MRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 268
+R NPTPYKVSV+ +L+D +H LWL+ P+ E++
Sbjct: 555 LRNSNPTPYKVSVTKELFDTLHNLWLDSVPIKEMK 589
>sp|Q95XX1|PNCB_CAEEL Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans
GN=Y54G2A.17 PE=2 SV=3
Length = 562
Score = 279 bits (713), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/272 (52%), Positives = 191/272 (70%), Gaps = 22/272 (8%)
Query: 1 MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFF---RTIEKEFGVPDFEK 57
+RSGV NF AV+LAL+DLGY+++G R+DSGDL+YLS E R+ F T++ E+ FEK
Sbjct: 309 IRSGVVNFVAVSLALHDLGYRSMGCRIDSGDLSYLSKELRECFVKVSTLKGEYKF--FEK 366
Query: 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 117
MSI ASND+NEET+ +LN Q HE++AFG+GT+LVTC Q ALGCV+KLV + QP+IKLS
Sbjct: 367 MSIVASNDINEETIMSLNDQQHEINAFGVGTHLVTCQKQPALGCVYKLVAQSAQPKIKLS 426
Query: 118 EDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQ 177
+DV+K++IP KK+ YR++GK GY ++D+M E+EP P+ ++ILCRHPF ESKRA V
Sbjct: 427 QDVTKITIPGKKKCYRIFGKNGYAILDLMMLEDEPEPQPNQQILCRHPFEESKRALVNAN 486
Query: 178 KVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQL-EQMRPDHMRR 236
K+ +L YW D M+ LPTL + +E + + +R DH R
Sbjct: 487 KIIKLHNVYWK-----DGEMI-----------TPLPTLNEIKEHVNESIRSTLRQDHRRY 530
Query: 237 LNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 268
LNPTPYKVSVS +LY F+H LWL AP+G+L+
Sbjct: 531 LNPTPYKVSVSERLYQFLHTLWLQNAPIGQLE 562
>sp|Q6XQN6|PNCB_HUMAN Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT1 PE=1
SV=2
Length = 538
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 152/263 (57%), Gaps = 19/263 (7%)
Query: 2 RSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSIT 61
RSG+PNF AVALAL +LGY+AVG+RLDSGDL + E RK FR +F VP E + I
Sbjct: 294 RSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIV 353
Query: 62 ASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVS 121
SN+++EE L L ++G EV+ GIGT +VTC Q +LG V+KLV + QPR+KL+ED
Sbjct: 354 VSNNIDEEALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPE 413
Query: 122 KVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEE 181
K ++P K ++RL G +G PL+D++ EP P+ G+ + P + V P +VE
Sbjct: 414 KQTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPP-GAQEPCTVRPAQVEP 472
Query: 182 LLK-CYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPT 240
LL+ C G + E LP+L ++R L ++ P+H R +P
Sbjct: 473 LLRLCLQQG-----------------QLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPA 515
Query: 241 PYKVSVSAKLYDFIHFLWLNEAP 263
Y+V +S +L ++ L ++P
Sbjct: 516 QYQVVLSERLQALVNSLCAGQSP 538
>sp|Q6XQN1|PNCB_RAT Nicotinate phosphoribosyltransferase OS=Rattus norvegicus GN=Naprt1
PE=2 SV=1
Length = 538
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 152/257 (59%), Gaps = 19/257 (7%)
Query: 2 RSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSIT 61
RSG+PNF AVALAL +LGY+AVG+RLDSGDL + E R FRT+ EF +P E + I
Sbjct: 294 RSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAKEIRGIFRTVGAEFQMPWLEFVPIA 353
Query: 62 ASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVS 121
SN+++E+ L L ++G EV+ GIGT +VTC Q ++GCV+KLV + QPRIKL+E+
Sbjct: 354 VSNNIDEKELARLAQKGSEVNVIGIGTNVVTCPKQPSMGCVYKLVSVGGQPRIKLTEESQ 413
Query: 122 KVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVV-PQKVE 180
K ++P K ++R EG L+D++ EPPPK G+ + R ++ V P +VE
Sbjct: 414 KETLPGSKAAFRFLVSEGSLLLDLLQLAEEPPPKAGQEL--RVWLQGAQEPCTVKPAQVE 471
Query: 181 ELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPT 240
LL+ Y G Y E LP+L+++R + L ++RP H + NP
Sbjct: 472 PLLRLYL--QQGQPY--------------EPLPSLEESRAFAQQSLSRLRPAHKQLQNPA 515
Query: 241 PYKVSVSAKLYDFIHFL 257
Y+V++S KL + L
Sbjct: 516 VYQVALSEKLRALVDSL 532
>sp|Q8CC86|PNCB_MOUSE Nicotinate phosphoribosyltransferase OS=Mus musculus GN=Naprt1 PE=2
SV=1
Length = 538
Score = 177 bits (449), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 146/256 (57%), Gaps = 17/256 (6%)
Query: 2 RSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSIT 61
RSG+PNF AVALAL +LGY+AVG+RLDSGDL + E R FRT +F +P E + I
Sbjct: 294 RSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAKEIRGIFRTAGAQFQMPWLESVPIA 353
Query: 62 ASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVS 121
SN+++E L L ++G EV+ GIGT +VTC Q ++GCV+KLV + QPRIKL+ED
Sbjct: 354 VSNNIDESELMRLAQKGSEVNVIGIGTSVVTCPKQPSMGCVYKLVSVGGQPRIKLTEDPE 413
Query: 122 KVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEE 181
K ++P K ++R G +G L+D++ EPPPK G+ + P + V P +VE
Sbjct: 414 KQTLPGSKAAFRFLGPDGSLLLDLLQLAEEPPPKAGQELRV-WPRGTQEPCTVKPAQVEP 472
Query: 182 LLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTP 241
LL+ Y + E LP+L ++R + L +RP H + +P
Sbjct: 473 LLRLYLQQ----------------GQLCEPLPSLDESRRFAQQSLSLLRPAHKQLQSPAV 516
Query: 242 YKVSVSAKLYDFIHFL 257
Y V++S KL + L
Sbjct: 517 YPVALSEKLRALVDSL 532
>sp|A5PK51|PNCB_BOVIN Nicotinate phosphoribosyltransferase OS=Bos taurus GN=NAPRT1 PE=2
SV=2
Length = 538
Score = 175 bits (444), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 150/256 (58%), Gaps = 17/256 (6%)
Query: 2 RSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSIT 61
RSG+PNF AVALAL +LGY+AVG+RLDSGDL + E R FRT +FGVP + + I
Sbjct: 294 RSGLPNFLAVALALQELGYQAVGVRLDSGDLLQQAREIRGVFRTAAAQFGVPWLQSVPIA 353
Query: 62 ASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVS 121
SN+++EE L L ++G EV+ GIGT +VTC Q +LGCV+KLV + QPR+KL+ED
Sbjct: 354 VSNNIDEEELARLAQKGSEVNVIGIGTSVVTCPRQPSLGCVYKLVSVGGQPRMKLTEDPE 413
Query: 122 KVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEE 181
K ++P K ++RL G +G L+D++ EPPP+ G+ + P + V P VE
Sbjct: 414 KQTLPGSKAAFRLLGSDGSLLLDVLQLAEEPPPQAGQELRV-WPRGARESRTVRPAHVEP 472
Query: 182 LLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTP 241
LL+ + VQ + E LP+L ++R + L ++ P H R P
Sbjct: 473 LLRLW---------------VQ-QGQLCEPLPSLAESRAFAQQSLHRLSPAHRRLEQPAL 516
Query: 242 YKVSVSAKLYDFIHFL 257
Y+V++S KL + L
Sbjct: 517 YQVALSEKLQALVDRL 532
>sp|Q6P3H4|PNCB_DANRE Nicotinate phosphoribosyltransferase OS=Danio rerio GN=naprt1 PE=2
SV=2
Length = 546
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 143/255 (56%), Gaps = 21/255 (8%)
Query: 3 SGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITA 62
SG+ FCAVALAL +L Y+ +G+RLDSGDL S + R+ FR K F VP FE + I
Sbjct: 293 SGLLCFCAVALALFELQYRPLGVRLDSGDLCRQSLDVRRVFRECSKHFSVPQFESLIIVG 352
Query: 63 SNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSK 122
+N ++E++L LNK+ +E+D G+GT+LVTC Q +LGCV+KLVE+ +PR+KLSED K
Sbjct: 353 TNSISEQSLSELNKKDNEIDVVGVGTHLVTCTRQPSLGCVYKLVEVRGRPRMKLSEDPEK 412
Query: 123 VSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPF-NESKRAYVVPQKVEE 181
++P +K YRL +G+P +D++ +E P G + C N + + + P +V
Sbjct: 413 STLPGRKAVYRLLDADGHPQMDVLCLCDEAAPAAGVELQCFSLLGNSTLQCSITPAQVSS 472
Query: 182 LLKCYWPGSSGGDYPMVFGDVQFLNKRREDLP--TLKDTRERCIKQLEQMRPDHMRRLNP 239
L Q + + LP + ++RER L+ + P H R P
Sbjct: 473 L------------------RTQVFSCGQITLPLNSASESRERAQISLQMLNPYHKRLQEP 514
Query: 240 TPYKVSVSAKLYDFI 254
Y V++S +L+ +
Sbjct: 515 HNYTVALSERLHSLV 529
>sp|O32090|PNCB_BACSU Nicotinate phosphoribosyltransferase OS=Bacillus subtilis (strain
168) GN=pncB PE=3 SV=1
Length = 490
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 84/144 (58%), Gaps = 12/144 (8%)
Query: 1 MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSI 60
+RSG+PN VA D +GIRLDSGDLAYLS +ARK E G D +
Sbjct: 239 LRSGMPNAIRVAKEFGD-RINFIGIRLDSGDLAYLSKKARKML----DEAGFTD---AKV 290
Query: 61 TASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPR----IKL 116
AS+DL+E T+ L QG +D +G+GT L+T Y Q ALG V+KLV I + + IK+
Sbjct: 291 IASSDLDEHTIMNLKAQGARIDVWGVGTKLITAYDQPALGAVYKLVAIEEDGKMVDTIKI 350
Query: 117 SEDVSKVSIPCKKRSYRLYGKEGY 140
S + KV+ P +K+ YR+ + +
Sbjct: 351 SSNPEKVTTPGRKKVYRIINQSNH 374
>sp|O53770|PNCB2_MYCTU Nicotinate phosphoribosyltransferase pncB2 OS=Mycobacterium
tuberculosis GN=pncB2 PE=2 SV=1
Length = 463
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 25 IRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAF 84
+RLDSGDL LS R T E++ I AS+ L+E + AL +D F
Sbjct: 257 VRLDSGDLDELSKATRARLDT-------AGLEQVEIFASSGLDENRIAALLAARCPIDGF 309
Query: 85 GIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYR 133
G+GT LV AL +KLV + R K S KV P +K+ +R
Sbjct: 310 GVGTQLVVAQDAPALDMAYKLVAYDGSGRTKFSS--GKVIYPGRKQVFR 356
>sp|Q10641|PNCB1_MYCTU Nicotinate phosphoribosyltransferase pncB1 OS=Mycobacterium
tuberculosis GN=pncB1 PE=3 SV=2
Length = 448
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 25 IRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAF 84
IR+DSG+L L+ +AR+ + + I S DL+E ++ AL +G VD++
Sbjct: 271 IRIDSGELGVLARQAREQLDRLGAT-------RTRIVVSGDLDEFSIAAL--RGEPVDSY 321
Query: 85 GIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS 117
G+GT LVT V+KLVE++ P K S
Sbjct: 322 GVGTSLVTGSGAPTANMVYKLVEVDGVPVQKRS 354
>sp|P39683|NPT1_YEAST Nicotinate phosphoribosyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NPT1 PE=1 SV=3
Length = 429
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 23 VGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEE---TLDALNKQGH 79
VG+R DSGD + + + + K +P F K+ I S+ LN E T K+
Sbjct: 291 VGVRQDSGDPVEYTKKISHHYHDVLK---LPKFSKI-ICYSDSLNVEKAITYSHAAKENG 346
Query: 80 EVDAFGIGTYLVTCYAQAA--------LGCVFKLVEINKQPRIKLSEDVSK 122
+ FGIGT + + + L V KL+E+N IK+S+++ K
Sbjct: 347 MLATFGIGTNFTNDFRKKSEPQVKSEPLNIVIKLLEVNGNHAIKISDNLGK 397
>sp|Q6F6W1|PNCB_ACIAD Nicotinate phosphoribosyltransferase OS=Acinetobacter sp. (strain
ADP1) GN=pncB PE=3 SV=1
Length = 407
Score = 39.3 bits (90), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK--QGHEV 81
G+R DSGD +A +R ++ D + +T S+ LN E L++ +G
Sbjct: 287 GLRHDSGDPYEWGDKAYAHYRKLK-----IDTKTKMLTFSDGLNLEKAWELHQYFKGRFK 341
Query: 82 DAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKV 123
+FGIGT L Q L V KLVE N Q K+S+ K
Sbjct: 342 VSFGIGTNLTNDMGQTPLNIVLKLVECNGQSVAKISDSPGKT 383
>sp|B4RL23|PNCB_NEIG2 Nicotinate phosphoribosyltransferase OS=Neisseria gonorrhoeae
(strain NCCP11945) GN=pncB PE=3 SV=1
Length = 402
Score = 37.7 bits (86), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK--QGHEV 81
G+R DSGD +A ++ ++ D +T S+ L+ E AL++ +G
Sbjct: 283 GLRHDSGDPYVWGDKAYAHYQKLK-----IDSRTKMLTFSDGLDIERSWALHQYFKGRFK 337
Query: 82 DAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKV 123
FGIGT L L V KLVE N Q KLS+ K
Sbjct: 338 TGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKT 379
>sp|Q5F836|PNCB_NEIG1 Nicotinate phosphoribosyltransferase OS=Neisseria gonorrhoeae
(strain ATCC 700825 / FA 1090) GN=pncB PE=3 SV=2
Length = 402
Score = 37.7 bits (86), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK--QGHEV 81
G+R DSGD +A ++ ++ D +T S+ L+ E AL++ +G
Sbjct: 283 GLRHDSGDPYVWGDKAYAHYQKLK-----IDSRTKMLTFSDGLDIERSWALHQYFKGRFK 337
Query: 82 DAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKV 123
FGIGT L L V KLVE N Q KLS+ K
Sbjct: 338 TGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKT 379
>sp|Q6LRA6|PNCB_PHOPR Nicotinate phosphoribosyltransferase OS=Photobacterium profundum
GN=pncB PE=3 SV=1
Length = 405
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Query: 16 NDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLD-AL 74
++L + VG+R DSGD +A K + +++ D S+ S+ L TLD AL
Sbjct: 281 SELSERFVGLRHDSGDPITWGEKAIKHYESLD-----IDLRTKSLIFSDSL---TLDKAL 332
Query: 75 NKQGHEVD----AFGIGTYLVTCY--AQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCK 128
N H +FGIGT L TC L V KL + +P K+S++ K I C+
Sbjct: 333 NIYKHFASRINVSFGIGTQL-TCDLPGVETLNVVLKLTQCEGRPVAKISDEPGK--IMCR 389
Query: 129 KRSYRLYGKEGYPLVD 144
Y ++ + + +
Sbjct: 390 DEDYLTQLRQAFKIAN 405
>sp|Q7NSK2|PNCB_CHRVO Nicotinate phosphoribosyltransferase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=pncB PE=3 SV=1
Length = 402
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQG--HEV 81
G+R DSGD +A +R + + KM +T S+ L+ ++ L + H
Sbjct: 285 GLRHDSGDPYIWGEKAIAHYRKLR----IDPATKM-LTFSDGLSVDSALQLQRHFSPHIQ 339
Query: 82 DAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 140
+FGIGT+ L V KLV N QP KLS+ K C ++ Y ++ +
Sbjct: 340 VSFGIGTHFTNDMGLEPLQIVLKLVSCNGQPVAKLSDSPGKTM--CSDETFLAYLRQVF 396
>sp|B2I1P1|PNCB_ACIBC Nicotinate phosphoribosyltransferase OS=Acinetobacter baumannii
(strain ACICU) GN=pncB PE=3 SV=1
Length = 404
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN---EETLDALNKQGHE 80
G+R DSGD +A +R ++ D + +T S+ LN L K +
Sbjct: 284 GLRHDSGDPYEWGDKAYAHYRKLK-----IDTKTKMLTFSDGLNLPKAWELHQYFKDRFQ 338
Query: 81 VDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSE 118
V +FGIGT L Q L V KLVE N Q K+S+
Sbjct: 339 V-SFGIGTNLTNDMGQTPLNIVLKLVECNGQSVAKISD 375
>sp|A3MA25|PNCB_ACIBT Nicotinate phosphoribosyltransferase OS=Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755) GN=pncB PE=3 SV=2
Length = 404
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN---EETLDALNKQGHE 80
G+R DSGD +A +R ++ D + +T S+ LN L K +
Sbjct: 284 GLRHDSGDPYEWGDKAYAHYRKLK-----IDTKTKMLTFSDGLNLPKAWELHQYFKDRFQ 338
Query: 81 VDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSE 118
V +FGIGT L Q L V KLVE N Q K+S+
Sbjct: 339 V-SFGIGTNLTNDMGQTPLNIVLKLVECNGQSVAKISD 375
>sp|B0SKU2|CH60_LEPBP 60 kDa chaperonin OS=Leptospira biflexa serovar Patoc (strain Patoc
1 / ATCC 23582 / Paris) GN=groL PE=3 SV=1
Length = 549
Score = 35.4 bits (80), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 46 IEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEV---------DAFGIGTYLVTCYAQ 96
I+K+FG P K +T + ++ E DA+ G ++ D G GT T AQ
Sbjct: 39 IDKKFGSPTITKDGVTVAKEIELE--DAIENMGAQMVKEVSTKTNDIAGDGTTTATILAQ 96
Query: 97 AALGCVFKLVEINKQPRIKLSEDVSKVSI----PCKKRSYRLYGKEGYPLVDIMTGENEP 152
A + K V P + L + K + KK + ++ K Y V ++ N+P
Sbjct: 97 AIINEGLKNVTAGANP-MALKHGIDKAVVVAVEEIKKHAIKINSKAEYANVATISANNDP 155
>sp|B0SCC0|CH60_LEPBA 60 kDa chaperonin OS=Leptospira biflexa serovar Patoc (strain Patoc
1 / Ames) GN=groL PE=3 SV=1
Length = 549
Score = 35.4 bits (80), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 46 IEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEV---------DAFGIGTYLVTCYAQ 96
I+K+FG P K +T + ++ E DA+ G ++ D G GT T AQ
Sbjct: 39 IDKKFGSPTITKDGVTVAKEIELE--DAIENMGAQMVKEVSTKTNDIAGDGTTTATILAQ 96
Query: 97 AALGCVFKLVEINKQPRIKLSEDVSKVSI----PCKKRSYRLYGKEGYPLVDIMTGENEP 152
A + K V P + L + K + KK + ++ K Y V ++ N+P
Sbjct: 97 AIINEGLKNVTAGANP-MALKHGIDKAVVVAVEEIKKHAIKINSKAEYANVATISANNDP 155
>sp|Q0BH38|PNCB_BURCM Nicotinate phosphoribosyltransferase OS=Burkholderia ambifaria
(strain ATCC BAA-244 / AMMD) GN=pncB PE=3 SV=1
Length = 399
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 140
AFG+GT L L V K+V N QP KLS+ K C R+Y Y ++ +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDRAYLAYLRQVF 387
>sp|B1YVJ0|PNCB_BURA4 Nicotinate phosphoribosyltransferase OS=Burkholderia ambifaria
(strain MC40-6) GN=pncB PE=3 SV=1
Length = 399
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 140
AFG+GT L L V K+V N QP KLS+ K C R+Y Y ++ +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDRAYLAYLRQVF 387
>sp|Q9JYM9|PNCB_NEIMB Nicotinate phosphoribosyltransferase OS=Neisseria meningitidis
serogroup B (strain MC58) GN=pncB PE=3 SV=1
Length = 402
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK--QGHEV 81
G+R DSGD +A ++ ++ D +T S+ L+ E AL++ +
Sbjct: 283 GLRHDSGDPYVWGDKAYAHYQKLK-----IDSRTKMLTFSDGLDIERSWALHQYFKDRFK 337
Query: 82 DAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKV 123
FGIGT L L V KLVE N Q KLS+ K
Sbjct: 338 TGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKT 379
>sp|Q9JTM8|PNCB_NEIMA Nicotinate phosphoribosyltransferase OS=Neisseria meningitidis
serogroup A / serotype 4A (strain Z2491) GN=pncB PE=3
SV=2
Length = 402
Score = 34.3 bits (77), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK--QGHEV 81
G+R DSGD +A ++ ++ D +T S+ L+ E AL++ +
Sbjct: 283 GLRHDSGDPYIWGDKAYAHYQKLK-----IDSRTKMLTFSDGLDIERSWALHQYFKDRFK 337
Query: 82 DAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKV 123
FGIGT L L V KLVE N Q KLS+ K
Sbjct: 338 TGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKT 379
>sp|A4W8V0|PNCB_ENT38 Nicotinate phosphoribosyltransferase OS=Enterobacter sp. (strain
638) GN=pncB PE=3 SV=1
Length = 400
Score = 34.3 bits (77), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVD- 82
G+R DSGD +A + K+ G+ K+ + + N + L+ V+
Sbjct: 279 GLRHDSGDPVEWGEKAIAHY----KKLGIDPLTKVLVFSDNLDLSKALELYRHFSARVNL 334
Query: 83 AFGIGTYLVTCYAQAA-LGCVFKLVEINKQPRIKLSEDVSKV 123
+FGIGT L Q L V KLVE N +P KLS+ K
Sbjct: 335 SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKT 376
>sp|A9M0T9|PNCB_NEIM0 Nicotinate phosphoribosyltransferase OS=Neisseria meningitidis
serogroup C (strain 053442) GN=pncB PE=3 SV=1
Length = 402
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK--QGHEV 81
G+R DSGD +A ++ ++ D +T S+ L+ E AL++ +
Sbjct: 283 GLRHDSGDPYVWGDKAYAHYQKLK-----IDSRTKMLTFSDGLDIERSWALHQYFKDRFK 337
Query: 82 DAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKV 123
FGIGT L L V KLVE N Q KLS+ K
Sbjct: 338 TGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKT 379
>sp|C5BD56|PNCB_EDWI9 Nicotinate phosphoribosyltransferase OS=Edwardsiella ictaluri
(strain 93-146) GN=pncB PE=3 SV=1
Length = 401
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVD- 82
G+R DSGD +A + ++ G+ +KM + + N + L H ++
Sbjct: 280 GLRHDSGDPIAWGEKAIAHY----EQLGLDPQDKMLVFSDNLDLPKALALYRHFHHRINL 335
Query: 83 AFGIGTYLVTCYAQAA--LGCVFKLVEINKQPRIKLSEDVSKV 123
+FGIGT L TC L V KLVE N +P KLS+ K
Sbjct: 336 SFGIGTRL-TCDLPGVRPLNIVIKLVECNGKPVAKLSDSPGKT 377
>sp|Q63S63|PNCB_BURPS Nicotinate phosphoribosyltransferase OS=Burkholderia pseudomallei
(strain K96243) GN=pncB PE=3 SV=1
Length = 399
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 142
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ +
Sbjct: 332 AFGVGTNLTNDLGYQPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVF-- 387
Query: 143 VDIMTGENEPP 153
G +PP
Sbjct: 388 -----GITQPP 393
>sp|Q62LW1|PNCB_BURMA Nicotinate phosphoribosyltransferase OS=Burkholderia mallei (strain
ATCC 23344) GN=pncB PE=3 SV=1
Length = 399
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 142
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ +
Sbjct: 332 AFGVGTNLTNDLGYQPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVF-- 387
Query: 143 VDIMTGENEPP 153
G +PP
Sbjct: 388 -----GITQPP 393
>sp|A0K5S6|PNCB_BURCH Nicotinate phosphoribosyltransferase OS=Burkholderia cenocepacia
(strain HI2424) GN=pncB PE=3 SV=1
Length = 399
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 140
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVF 387
>sp|Q1BXX4|PNCB_BURCA Nicotinate phosphoribosyltransferase OS=Burkholderia cenocepacia
(strain AU 1054) GN=pncB PE=3 SV=1
Length = 399
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 140
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVF 387
>sp|A4JCM8|PNCB_BURVG Nicotinate phosphoribosyltransferase OS=Burkholderia vietnamiensis
(strain G4 / LMG 22486) GN=pncB PE=3 SV=1
Length = 399
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 142
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ + +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVFGI 389
>sp|B1JY80|PNCB_BURCC Nicotinate phosphoribosyltransferase OS=Burkholderia cenocepacia
(strain MC0-3) GN=pncB PE=3 SV=1
Length = 399
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 140
AFG+GT L L V K+V N QP KLS+ K C ++Y Y ++ +
Sbjct: 332 AFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKLSDSPGKSM--CDDKAYLAYLRQVF 387
>sp|A1BHS5|CH60_CHLPD 60 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266)
GN=groL PE=3 SV=1
Length = 547
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 16/127 (12%)
Query: 46 IEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEV---------DAFGIGTYLVTCYAQ 96
I+K+FG P K +T + ++ E DA+ G ++ D G GT T AQ
Sbjct: 40 IDKKFGAPTSTKDGVTVAKEI--ELADAVENMGAQMVREVASKTSDVAGDGTTTATVLAQ 97
Query: 97 AALGCVFKLVEINKQP---RIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPP 153
A K V +P + + V +V + + S + GK+ V ++ N+
Sbjct: 98 AIYREGLKNVAAGARPIDLKRGIDRAVKEVVLELRNISRSISGKKEIAQVGTISANND-- 155
Query: 154 PKVGERI 160
P++GE I
Sbjct: 156 PEIGELI 162
>sp|A4G168|PNCB_HERAR Nicotinate phosphoribosyltransferase OS=Herminiimonas
arsenicoxydans GN=pncB PE=3 SV=1
Length = 397
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 81 VDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 140
+ FGIGT L AL V KL+ N QP KLS+ K C+ ++ Y ++ +
Sbjct: 334 LTGFGIGTNLSNDTGIPALNIVMKLMACNGQPVAKLSDSAGKTL--CRDETFLAYLRQVF 391
>sp|B8D7P8|PNCB_BUCAT Nicotinate phosphoribosyltransferase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain Tuc7) GN=pncB PE=3 SV=1
Length = 399
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE-VD 82
GIR DSGD +A K + ++ G+ K ++ S++L+ + + +L K+ H+ ++
Sbjct: 280 GIRHDSGDPVKWGEKALKHY----EKLGIDPCTK-TLLFSDNLDFKKIISLYKKFHKKIN 334
Query: 83 A-FGIGTYLVTC---YAQAALGCVFKLVEINKQPRIKLSE 118
FGIGT L TC Y + L V KLVE N +P K+S+
Sbjct: 335 VIFGIGTKL-TCDIPYVKP-LNIVIKLVECNGKPVAKISD 372
>sp|P57442|PNCB_BUCAI Nicotinate phosphoribosyltransferase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=pncB PE=3 SV=1
Length = 399
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE-VD 82
GIR DSGD +A K + ++ G+ K ++ S++L+ + + +L K+ H+ ++
Sbjct: 280 GIRHDSGDPVKWGEKALKHY----EKLGIDPCTK-TLLFSDNLDFKKIISLYKKFHKKIN 334
Query: 83 A-FGIGTYLVTC---YAQAALGCVFKLVEINKQPRIKLSE 118
FGIGT L TC Y + L V KLVE N +P K+S+
Sbjct: 335 VIFGIGTKL-TCDIPYVKP-LNIVIKLVECNGKPVAKISD 372
>sp|B8D9E6|PNCB_BUCA5 Nicotinate phosphoribosyltransferase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain 5A) GN=pncB PE=3 SV=1
Length = 399
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE-VD 82
GIR DSGD +A K + ++ G+ K ++ S++L+ + + +L K+ H+ ++
Sbjct: 280 GIRHDSGDPVKWGEKALKHY----EKLGIDPCTK-TLLFSDNLDFKKIISLYKKFHKKIN 334
Query: 83 A-FGIGTYLVTC---YAQAALGCVFKLVEINKQPRIKLSE 118
FGIGT L TC Y + L V KLVE N +P K+S+
Sbjct: 335 VIFGIGTKL-TCDIPYVKP-LNIVIKLVECNGKPVAKISD 372
>sp|A8AIE5|PNCB_CITK8 Nicotinate phosphoribosyltransferase OS=Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=pncB PE=3 SV=1
Length = 400
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 18/132 (13%)
Query: 6 PNFCAVALA--------LNDLGYKAV----GIRLDSGDLAYLSCEARKFFRTIEKEFGVP 53
PN +AL L D G + G+R DSGD +A + ++ G+
Sbjct: 249 PNQLGIALTDCITMDAFLRDFGTEFATRYQGLRHDSGDPVEWGEKAIAHY----QKLGID 304
Query: 54 DFEKMSITASNDLNEETLDALNKQGHEVD-AFGIGTYLVTCYAQAA-LGCVFKLVEINKQ 111
K + + N ++ +D V +FGIGT L Q L V KLVE N +
Sbjct: 305 PLSKTLVFSDNLDLKKAVDLYRHFSSRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGK 364
Query: 112 PRIKLSEDVSKV 123
P KLS+ K
Sbjct: 365 PVAKLSDSPGKT 376
>sp|C6DFB8|PNCB_PECCP Nicotinate phosphoribosyltransferase OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=pncB PE=3 SV=1
Length = 401
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITA--SNDLNEETLDALNKQ-GHE 80
G+R DSGD +A ++ + + + MS T S++LN + AL + G
Sbjct: 280 GLRHDSGDPVDWGEKAIAHYQRL-------NIDPMSKTLVFSDNLNLDKALALYRHFGQR 332
Query: 81 VD-AFGIGTYLVTCYAQAA--LGCVFKLVEINKQPRIKLSEDVSKV 123
V+ FGIGT L TC L V KLVE N +P KLS+ K
Sbjct: 333 VNLVFGIGTRL-TCDIPGVKPLNIVIKLVECNGKPVAKLSDSPGKT 377
>sp|B2WBM8|EFGM_PYRTR Elongation factor G, mitochondrial OS=Pyrenophora tritici-repentis
(strain Pt-1C-BFP) GN=mef1 PE=3 SV=1
Length = 801
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 10 AVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPD----FEKMSITASND 65
++ +ND AV DS ++A+ + + F + + G P K +ITA N+
Sbjct: 663 GTSMVINDGATHAV----DSSEMAFKNATQQAFRKAFKA--GAPQVLEPLMKTTITAPNE 716
Query: 66 LNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVF 103
+ LNK+ ++ IG T YA +L +F
Sbjct: 717 FQGSVVGLLNKRNAVINDTEIGPEDFTVYADCSLNSMF 754
>sp|B0RVE9|PNCB_XANCB Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
campestris (strain B100) GN=pncB PE=3 SV=1
Length = 398
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 142
AFG+GT L L V K+V N QP KLS+ K C+ Y Y ++ + L
Sbjct: 329 AFGVGTSLTNDLGPTPLQIVIKMVRCNGQPVAKLSDSPGKSM--CEDLGYLRYLRDVFGL 386
>sp|Q8PCP3|PNCB_XANCP Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=pncB PE=3 SV=1
Length = 398
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 142
AFG+GT L L V K+V N QP KLS+ K C+ Y Y ++ + L
Sbjct: 329 AFGVGTSLTNDLGPTPLQIVIKMVRCNGQPVAKLSDSPGKSM--CEDLGYLRYLRDVFGL 386
>sp|Q4UQS8|PNCB_XANC8 Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=pncB PE=3 SV=1
Length = 398
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 142
AFG+GT L L V K+V N QP KLS+ K C+ Y Y ++ + L
Sbjct: 329 AFGVGTSLTNDLGPTPLQIVIKMVRCNGQPVAKLSDSPGKSM--CEDLGYLRYLRDVFGL 386
>sp|B2U8V2|PNCB_RALPJ Nicotinate phosphoribosyltransferase OS=Ralstonia pickettii (strain
12J) GN=pncB PE=3 SV=1
Length = 389
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDA 83
G+R DSGD K + + E P + + + S D+ + G A
Sbjct: 275 GVRHDSGDPFEWGERMLKHYDDMRAE---PKSKALIFSDSLDMPKVIGLYERFHGRCKLA 331
Query: 84 FGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 140
FG+GT L L V K+V N QP KLS+ K C +Y Y K+ +
Sbjct: 332 FGVGTNLTNDLGYTPLQIVIKIVRCNGQPVAKLSDAPEKTM--CDDPAYLTYLKQVF 386
>sp|Q0K8J9|PNCB_CUPNH Nicotinate phosphoribosyltransferase OS=Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=pncB PE=3
SV=1
Length = 392
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGY 140
AFG+GT L L V K+V N QP KLS+ K C Y Y ++ Y
Sbjct: 331 AFGVGTNLTNDLGYTPLQIVIKMVRCNGQPVAKLSDTPEKTM--CDDPGYLSYLRQVY 386
>sp|Q128P8|PNCB_POLSJ Nicotinate phosphoribosyltransferase OS=Polaromonas sp. (strain
JS666 / ATCC BAA-500) GN=pncB PE=3 SV=1
Length = 395
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 83 AFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPL 142
AFGIGT L L V K++ N QP KLS+ SK C+ Y Y ++ + +
Sbjct: 337 AFGIGTNLTNDLGYEPLQIVIKMIRCNGQPVAKLSDTPSKNM--CEDEKYLAYLRQVFEI 394
>sp|Q7N621|PNCB_PHOLL Nicotinate phosphoribosyltransferase OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=pncB PE=3 SV=1
Length = 404
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVD- 82
G+R DSGD +A + ++ G+ K ++ S+ L+ + AL + H
Sbjct: 283 GLRHDSGDPVQWGEKAIAHY----QKLGIDPMTK-TLVFSDSLDFQKALALYRHFHNRIN 337
Query: 83 -AFGIGTYLVTCYAQAA--LGCVFKLVEINKQPRIKLSEDVSKV 123
FGIGT L TC L V KLVE N +P KLS+ K
Sbjct: 338 LIFGIGTQL-TCNIPGVKPLNIVIKLVECNGKPVAKLSDSPGKT 380
>sp|Q3Z6L3|CH60_DEHE1 60 kDa chaperonin OS=Dehalococcoides ethenogenes (strain 195)
GN=groL PE=3 SV=1
Length = 537
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 46 IEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEV---------DAFGIGTYLVTCYAQ 96
+E+++G P +T + D+ E DA G ++ DA G GT AQ
Sbjct: 39 LERKWGAPTVIDDGVTIARDI--ELPDAFENMGAQLVKEAATRTSDAAGDGTTTSIVLAQ 96
Query: 97 AALGCVFKLVEINKQPRIKLSEDVSKVSIPCK----KRSYRLYGKEGYPLVDIMTGENEP 152
A + FK + +P I L + K K K S + GK+ V +TG++
Sbjct: 97 ALINEAFKNIAAGAEP-INLKRGIEKAVAALKAQLRKNSTPVKGKQQIVQVATITGKD-- 153
Query: 153 PPKVGERI 160
P++G I
Sbjct: 154 -PEIGNLI 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,622,846
Number of Sequences: 539616
Number of extensions: 4527955
Number of successful extensions: 9777
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 9723
Number of HSP's gapped (non-prelim): 120
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)