Query 024420
Match_columns 268
No_of_seqs 143 out of 1181
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 07:56:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024420.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024420hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f7f_A Nicotinate phosphoribos 100.0 2.9E-56 1E-60 437.4 23.6 235 1-260 238-478 (494)
2 3dhf_A Nicotinamide phosphorib 100.0 6.6E-36 2.3E-40 292.6 12.6 161 19-223 305-481 (484)
3 2i14_A Nicotinate-nucleotide p 100.0 3.6E-35 1.2E-39 281.0 16.1 171 3-232 219-394 (395)
4 2i1o_A Nicotinate phosphoribos 100.0 1.8E-34 6.1E-39 276.5 16.4 169 3-231 222-396 (398)
5 2im5_A Nicotinate phosphoribos 100.0 6.1E-32 2.1E-36 258.8 7.3 122 4-136 253-387 (394)
6 1yir_A Naprtase 2, nicotinate 100.0 1.2E-31 4.2E-36 257.6 8.6 122 4-135 267-396 (408)
7 1ybe_A Naprtase, nicotinate ph 100.0 4.2E-31 1.5E-35 256.6 7.4 111 21-139 307-430 (449)
8 3os4_A Naprtase, nicotinate ph 100.0 8E-31 2.7E-35 252.0 8.7 117 4-130 262-386 (407)
9 4hl7_A Naprtase, nicotinate ph 100.0 5.1E-30 1.8E-34 248.7 8.4 113 4-125 272-397 (446)
10 1vlp_A Naprtase, nicotinate ph 100.0 4.1E-30 1.4E-34 249.3 3.9 121 4-135 286-421 (441)
11 2jbm_A Nicotinate-nucleotide p 99.1 2.2E-10 7.5E-15 105.9 7.4 81 22-116 218-298 (299)
12 3c2e_A Nicotinate-nucleotide p 98.6 2.4E-08 8.2E-13 92.0 5.4 75 22-107 220-294 (294)
13 3gnn_A Nicotinate-nucleotide p 98.4 6.9E-07 2.4E-11 82.8 8.3 69 22-107 230-298 (298)
14 3paj_A Nicotinate-nucleotide p 98.3 1.1E-06 3.7E-11 82.2 7.9 69 22-107 252-320 (320)
15 2b7n_A Probable nicotinate-nuc 98.2 1.3E-06 4.4E-11 79.5 6.4 70 22-105 203-272 (273)
16 1qap_A Quinolinic acid phospho 97.8 1.6E-05 5.6E-10 73.3 5.9 67 22-105 229-295 (296)
17 1qpo_A Quinolinate acid phosph 96.8 0.0042 1.4E-07 56.9 8.6 70 22-105 215-284 (284)
18 3tqv_A Nicotinate-nucleotide p 96.5 0.0035 1.2E-07 57.7 6.5 68 22-106 219-286 (287)
19 1o4u_A Type II quinolic acid p 96.2 0.0089 3.1E-07 54.8 7.2 71 22-106 214-284 (285)
20 3l0g_A Nicotinate-nucleotide p 96.2 0.015 5.1E-07 53.9 8.5 67 22-105 228-294 (300)
21 1x1o_A Nicotinate-nucleotide p 94.2 0.14 4.9E-06 46.7 8.3 46 57-107 240-285 (286)
22 3f4w_A Putative hexulose 6 pho 85.8 1.1 3.7E-05 37.4 5.3 37 56-94 158-194 (211)
23 3khj_A Inosine-5-monophosphate 80.5 7.6 0.00026 36.1 9.3 40 57-98 207-247 (361)
24 2yxb_A Coenzyme B12-dependent 80.5 8.3 0.00028 31.6 8.6 66 17-90 67-132 (161)
25 4fo4_A Inosine 5'-monophosphat 79.8 9.6 0.00033 35.6 9.8 43 57-101 211-254 (366)
26 1y0e_A Putative N-acetylmannos 79.7 4.9 0.00017 33.6 7.1 34 57-92 175-209 (223)
27 3hgj_A Chromate reductase; TIM 79.5 4.5 0.00015 37.2 7.3 76 5-94 238-325 (349)
28 3l5l_A Xenobiotic reductase A; 78.8 3.8 0.00013 37.9 6.6 76 5-94 245-332 (363)
29 1tqx_A D-ribulose-5-phosphate 77.3 2 6.9E-05 37.6 4.1 36 57-94 173-208 (227)
30 4af0_A Inosine-5'-monophosphat 76.5 2.9 9.9E-05 41.7 5.3 94 6-108 280-379 (556)
31 2v82_A 2-dehydro-3-deoxy-6-pho 75.6 1.6 5.6E-05 36.5 2.9 35 57-93 148-182 (212)
32 3ctl_A D-allulose-6-phosphate 75.3 3.7 0.00013 35.9 5.2 50 34-93 152-202 (231)
33 1z41_A YQJM, probable NADH-dep 75.2 7.6 0.00026 35.4 7.5 75 5-93 228-313 (338)
34 1ep3_A Dihydroorotate dehydrog 74.1 3.8 0.00013 36.1 5.1 35 57-93 241-276 (311)
35 3gka_A N-ethylmaleimide reduct 73.4 8.2 0.00028 36.0 7.4 36 58-94 288-323 (361)
36 3gr7_A NADPH dehydrogenase; fl 72.4 5.3 0.00018 36.7 5.7 76 5-94 228-314 (340)
37 2yw3_A 4-hydroxy-2-oxoglutarat 72.1 4.4 0.00015 34.6 4.8 36 55-92 149-184 (207)
38 4ab4_A Xenobiotic reductase B; 71.6 9.6 0.00033 35.5 7.4 36 58-94 280-315 (362)
39 1eep_A Inosine 5'-monophosphat 71.2 15 0.00052 34.1 8.7 41 56-98 255-296 (404)
40 1wa3_A 2-keto-3-deoxy-6-phosph 70.4 1.4 4.9E-05 36.6 1.3 36 55-92 148-183 (205)
41 3ffs_A Inosine-5-monophosphate 69.5 16 0.00054 34.7 8.4 44 56-101 245-289 (400)
42 2r14_A Morphinone reductase; H 69.3 7.7 0.00026 36.2 6.2 35 58-93 300-334 (377)
43 2gou_A Oxidoreductase, FMN-bin 69.2 11 0.00037 35.0 7.1 75 5-93 249-328 (365)
44 1vyr_A Pentaerythritol tetrani 67.6 12 0.00043 34.5 7.2 75 5-93 250-329 (364)
45 1rpx_A Protein (ribulose-phosp 66.7 7.5 0.00026 32.8 5.1 50 36-95 166-215 (230)
46 1vrd_A Inosine-5'-monophosphat 66.7 19 0.00064 34.2 8.4 40 57-98 340-380 (494)
47 1yxy_A Putative N-acetylmannos 66.4 3.5 0.00012 35.0 3.0 34 57-92 186-220 (234)
48 1jcn_A Inosine monophosphate d 64.8 28 0.00094 33.3 9.2 45 57-104 358-403 (514)
49 1vc4_A Indole-3-glycerol phosp 64.7 12 0.00041 33.0 6.2 66 18-95 173-244 (254)
50 3kru_A NADH:flavin oxidoreduct 64.0 15 0.00052 33.8 7.0 75 5-94 229-314 (343)
51 4avf_A Inosine-5'-monophosphat 63.8 29 0.00099 33.3 9.2 40 57-98 332-372 (490)
52 3qja_A IGPS, indole-3-glycerol 63.6 5.5 0.00019 35.7 3.8 36 57-94 213-249 (272)
53 3igs_A N-acetylmannosamine-6-p 62.8 12 0.0004 32.5 5.7 34 57-92 181-215 (232)
54 3q58_A N-acetylmannosamine-6-p 62.7 9.7 0.00033 33.0 5.1 34 57-92 181-215 (229)
55 1h5y_A HISF; histidine biosynt 62.3 11 0.00036 31.5 5.2 35 57-93 198-233 (253)
56 1yad_A Regulatory protein TENI 61.3 3.5 0.00012 34.7 2.0 36 57-94 164-199 (221)
57 3cu2_A Ribulose-5-phosphate 3- 61.1 9.9 0.00034 33.4 4.9 47 37-93 175-223 (237)
58 3inp_A D-ribulose-phosphate 3- 60.8 7.5 0.00026 34.5 4.1 50 35-94 181-230 (246)
59 3b0p_A TRNA-dihydrouridine syn 60.1 22 0.00075 32.6 7.3 74 6-94 144-232 (350)
60 3aty_A Tcoye, prostaglandin F2 60.1 22 0.00076 33.1 7.4 35 58-93 308-342 (379)
61 1tqj_A Ribulose-phosphate 3-ep 59.3 8 0.00027 33.3 4.0 51 34-94 158-208 (230)
62 4e38_A Keto-hydroxyglutarate-a 58.1 11 0.00038 33.2 4.7 37 54-92 171-207 (232)
63 1mxs_A KDPG aldolase; 2-keto-3 57.5 19 0.00065 31.2 6.1 37 54-93 163-200 (225)
64 2hsa_B 12-oxophytodienoate red 57.3 4.8 0.00016 38.0 2.3 36 58-94 320-355 (402)
65 2qjg_A Putative aldolase MJ040 56.4 39 0.0013 29.0 7.9 67 11-94 171-244 (273)
66 2fli_A Ribulose-phosphate 3-ep 56.2 8.9 0.0003 31.9 3.6 36 57-94 170-205 (220)
67 1xi3_A Thiamine phosphate pyro 55.5 4.6 0.00016 33.3 1.7 36 57-94 162-197 (215)
68 2qr6_A IMP dehydrogenase/GMP r 55.4 34 0.0012 31.5 7.8 45 57-103 277-322 (393)
69 3bw2_A 2-nitropropane dioxygen 54.5 8.6 0.00029 35.3 3.5 39 57-97 208-247 (369)
70 1jub_A Dihydroorotate dehydrog 54.1 29 0.001 30.6 6.9 34 57-92 242-276 (311)
71 1geq_A Tryptophan synthase alp 52.7 12 0.00042 31.8 4.0 35 57-93 191-226 (248)
72 2z6i_A Trans-2-enoyl-ACP reduc 50.5 45 0.0015 30.0 7.6 39 57-97 162-201 (332)
73 2e6f_A Dihydroorotate dehydrog 50.5 30 0.001 30.5 6.3 35 56-92 243-278 (314)
74 3usb_A Inosine-5'-monophosphat 50.1 68 0.0023 31.0 9.2 40 57-98 359-399 (511)
75 2zbt_A Pyridoxal biosynthesis 49.9 13 0.00044 32.8 3.8 32 60-93 212-244 (297)
76 1me8_A Inosine-5'-monophosphat 49.3 24 0.00082 33.9 5.8 92 6-106 241-339 (503)
77 1ps9_A 2,4-dienoyl-COA reducta 47.8 19 0.00066 35.3 5.1 76 5-94 227-317 (671)
78 2tps_A Protein (thiamin phosph 47.7 5.6 0.00019 33.2 1.0 35 57-93 172-206 (227)
79 1ccw_A Protein (glutamate muta 47.2 48 0.0016 26.0 6.4 64 20-91 55-124 (137)
80 1h1y_A D-ribulose-5-phosphate 46.9 7.8 0.00027 33.0 1.8 36 57-94 173-208 (228)
81 2xgg_A Microneme protein 2; A/ 46.8 36 0.0012 27.1 5.7 37 54-90 121-163 (178)
82 2w6r_A Imidazole glycerol phos 46.5 23 0.00077 30.3 4.7 35 57-93 200-235 (266)
83 4hqo_A Sporozoite surface prot 46.0 34 0.0012 29.4 5.9 38 53-90 123-166 (266)
84 1ka9_F Imidazole glycerol phos 45.8 56 0.0019 27.5 7.1 75 7-93 32-110 (252)
85 4fxs_A Inosine-5'-monophosphat 45.4 80 0.0027 30.3 8.9 77 9-97 283-373 (496)
86 3ajx_A 3-hexulose-6-phosphate 44.1 9.9 0.00034 31.3 2.0 36 57-94 158-193 (207)
87 1icp_A OPR1, 12-oxophytodienoa 43.9 15 0.00053 34.1 3.5 76 5-94 255-337 (376)
88 3ceu_A Thiamine phosphate pyro 43.7 8.5 0.00029 32.4 1.5 36 56-93 143-178 (210)
89 4e38_A Keto-hydroxyglutarate-a 42.5 1.2E+02 0.004 26.5 8.8 63 5-79 45-107 (232)
90 3l5a_A NADH/flavin oxidoreduct 42.4 45 0.0015 31.5 6.5 76 5-94 263-353 (419)
91 3o63_A Probable thiamine-phosp 42.2 8.4 0.00029 33.9 1.3 36 57-94 191-226 (243)
92 3r2g_A Inosine 5'-monophosphat 41.6 1.6E+02 0.0056 27.3 10.1 39 59-99 201-240 (361)
93 1wbh_A KHG/KDPG aldolase; lyas 41.2 21 0.00073 30.5 3.7 45 41-92 145-189 (214)
94 3kbq_A Protein TA0487; structu 40.5 69 0.0024 26.7 6.7 50 7-67 24-73 (172)
95 1to3_A Putative aldolase YIHT; 40.1 68 0.0023 28.9 7.1 72 10-93 181-260 (304)
96 3r2g_A Inosine 5'-monophosphat 40.0 29 0.001 32.4 4.7 92 7-107 100-197 (361)
97 2gjl_A Hypothetical protein PA 39.8 19 0.00064 32.3 3.3 38 57-96 172-210 (328)
98 1p0k_A Isopentenyl-diphosphate 39.3 72 0.0025 28.7 7.2 36 56-93 250-286 (349)
99 2btm_A TIM, protein (triosepho 39.3 39 0.0013 30.2 5.2 56 33-92 183-238 (252)
100 1yya_A Triosephosphate isomera 39.1 40 0.0014 30.0 5.2 56 33-92 183-238 (250)
101 3lab_A Putative KDPG (2-keto-3 39.0 22 0.00076 31.0 3.5 36 54-91 156-191 (217)
102 3tdn_A FLR symmetric alpha-bet 38.7 6.5 0.00022 33.7 0.0 36 57-94 200-236 (247)
103 1n3y_A Integrin alpha-X; alpha 37.7 38 0.0013 26.9 4.6 37 54-90 109-152 (198)
104 4f8x_A Endo-1,4-beta-xylanase; 37.6 24 0.00083 32.5 3.7 47 39-93 162-219 (335)
105 1vhc_A Putative KHG/KDPG aldol 37.6 27 0.00093 30.1 3.8 45 41-92 146-190 (224)
106 1vzw_A Phosphoribosyl isomeras 37.0 45 0.0016 28.0 5.1 35 57-93 190-228 (244)
107 1f76_A Dihydroorotate dehydrog 37.0 63 0.0022 28.8 6.3 34 57-92 289-323 (336)
108 4hqf_A Thrombospondin-related 36.7 59 0.002 27.9 5.9 36 54-89 127-168 (281)
109 1qo2_A Molecule: N-((5-phospho 36.1 73 0.0025 26.8 6.3 72 7-94 145-230 (241)
110 3tsm_A IGPS, indole-3-glycerol 35.8 28 0.00095 31.3 3.7 37 57-95 220-257 (272)
111 2yc6_A Triosephosphate isomera 35.2 50 0.0017 29.5 5.2 55 33-92 187-242 (257)
112 3ibs_A Conserved hypothetical 34.6 71 0.0024 25.7 5.8 36 54-89 110-150 (218)
113 1b9b_A TIM, protein (triosepho 34.3 35 0.0012 30.6 4.0 56 33-92 185-240 (255)
114 1thf_D HISF protein; thermophI 34.2 1.1E+02 0.0037 25.7 7.1 78 7-93 31-109 (253)
115 1vcv_A Probable deoxyribose-ph 33.5 1.4E+02 0.0048 25.9 7.8 72 5-89 130-220 (226)
116 3bo9_A Putative nitroalkan dio 33.5 30 0.001 31.2 3.5 38 57-96 176-214 (326)
117 4a3u_A NCR, NADH\:flavin oxido 33.4 21 0.00071 32.9 2.5 75 6-94 241-322 (358)
118 2nv1_A Pyridoxal biosynthesis 33.1 30 0.001 30.8 3.4 34 59-94 211-245 (305)
119 3lab_A Putative KDPG (2-keto-3 32.9 2E+02 0.0067 25.0 8.6 63 5-79 24-86 (217)
120 2y88_A Phosphoribosyl isomeras 32.7 43 0.0015 28.0 4.3 72 7-94 150-232 (244)
121 3jr2_A Hexulose-6-phosphate sy 32.5 12 0.00039 31.7 0.6 35 57-93 166-200 (218)
122 1ijb_A VON willebrand factor; 32.1 46 0.0016 27.1 4.2 36 54-89 114-157 (202)
123 2j27_A Triosephosphate isomera 31.8 37 0.0013 30.3 3.8 56 33-92 184-239 (250)
124 1o5x_A TIM, triosephosphate is 30.9 43 0.0015 29.8 4.0 55 34-92 183-237 (248)
125 1tre_A Triosephosphate isomera 30.9 41 0.0014 30.0 3.9 55 33-92 184-238 (255)
126 1gox_A (S)-2-hydroxy-acid oxid 30.5 1E+02 0.0035 28.3 6.7 71 10-92 237-314 (370)
127 1shu_X Anthrax toxin receptor 30.5 1.5E+02 0.0051 22.9 6.9 35 54-88 102-144 (182)
128 2xij_A Methylmalonyl-COA mutas 30.2 1.1E+02 0.0039 31.4 7.5 68 17-92 653-720 (762)
129 1rd5_A Tryptophan synthase alp 30.0 61 0.0021 27.8 4.8 35 57-93 201-236 (262)
130 3m9y_A Triosephosphate isomera 29.8 47 0.0016 29.6 4.1 56 33-92 187-242 (254)
131 1jgt_A Beta-lactam synthetase; 28.9 51 0.0018 31.7 4.5 58 30-89 217-276 (513)
132 1zfj_A Inosine monophosphate d 28.8 3.6E+02 0.012 25.1 10.5 41 56-98 335-376 (491)
133 3rot_A ABC sugar transporter, 28.7 1.3E+02 0.0044 25.2 6.6 62 15-85 29-93 (297)
134 1aw2_A Triosephosphate isomera 28.4 43 0.0015 29.9 3.6 55 33-92 186-240 (256)
135 3o74_A Fructose transport syst 28.4 1.3E+02 0.0044 24.5 6.4 17 9-25 109-125 (272)
136 2b2x_A Integrin alpha-1; compu 28.4 53 0.0018 27.0 4.0 38 53-90 122-165 (223)
137 2vxn_A Triosephosphate isomera 28.3 53 0.0018 29.2 4.2 56 33-92 185-240 (251)
138 1r2r_A TIM, triosephosphate is 26.9 48 0.0017 29.4 3.7 56 33-92 182-237 (248)
139 4adt_A Pyridoxine biosynthetic 26.8 36 0.0012 30.9 2.9 35 58-94 210-245 (297)
140 1mo0_A TIM, triosephosphate is 26.4 48 0.0016 30.0 3.6 56 33-92 201-256 (275)
141 1q15_A CARA; CMPR, (2S,5S)-5-c 26.4 64 0.0022 30.9 4.7 58 30-89 214-273 (503)
142 3zwt_A Dihydroorotate dehydrog 26.3 2E+02 0.0069 26.5 8.0 33 57-91 298-331 (367)
143 2jgq_A Triosephosphate isomera 26.1 61 0.0021 28.5 4.1 36 56-92 187-222 (233)
144 1mf7_A Integrin alpha M; cell 26.1 33 0.0011 27.4 2.3 37 54-90 105-148 (194)
145 3tdn_A FLR symmetric alpha-bet 25.8 69 0.0024 27.1 4.4 72 7-93 36-114 (247)
146 3n2n_F Anthrax toxin receptor 25.6 53 0.0018 25.7 3.3 33 55-87 106-146 (185)
147 1vcf_A Isopentenyl-diphosphate 25.6 1.6E+02 0.0056 26.2 7.0 34 57-92 256-290 (332)
148 1req_A Methylmalonyl-COA mutas 25.5 1.3E+02 0.0045 30.7 7.0 69 16-92 644-712 (727)
149 2c6q_A GMP reductase 2; TIM ba 25.3 3.8E+02 0.013 24.3 11.1 40 57-98 223-263 (351)
150 1mkz_A Molybdenum cofactor bio 25.3 1.6E+02 0.0055 23.9 6.4 38 7-44 29-66 (172)
151 1h5y_A HISF; histidine biosynt 25.2 2.7E+02 0.0092 22.6 7.9 75 6-92 33-111 (253)
152 1ka9_F Imidazole glycerol phos 25.0 91 0.0031 26.1 5.0 36 57-94 196-232 (252)
153 2fep_A Catabolite control prot 24.3 2.6E+02 0.0089 23.2 7.8 62 14-85 41-102 (289)
154 2i9e_A Triosephosphate isomera 24.2 86 0.003 28.0 4.8 56 33-92 181-236 (259)
155 1m6j_A TIM, TPI, triosephospha 24.1 57 0.002 29.2 3.6 56 33-92 191-246 (261)
156 1wa3_A 2-keto-3-deoxy-6-phosph 24.1 2.8E+02 0.0096 22.3 8.1 68 4-82 20-87 (205)
157 3t7v_A Methylornithine synthas 23.7 2.7E+02 0.0092 24.5 8.1 72 6-87 94-169 (350)
158 1y5e_A Molybdenum cofactor bio 23.7 1.3E+02 0.0045 24.3 5.5 38 7-44 32-69 (169)
159 2v5b_A Triosephosphate isomera 23.6 1.2E+02 0.0042 26.7 5.6 54 34-91 179-232 (244)
160 1w8s_A FBP aldolase, fructose- 23.6 1.9E+02 0.0066 25.1 6.9 35 58-94 197-238 (263)
161 2nli_A Lactate oxidase; flavoe 23.5 2E+02 0.007 26.3 7.4 71 9-92 240-318 (368)
162 2y88_A Phosphoribosyl isomeras 23.1 3E+02 0.01 22.6 7.9 72 7-92 32-108 (244)
163 1v7p_C Integrin alpha-2; snake 23.1 68 0.0023 25.8 3.6 36 54-89 107-148 (200)
164 1hg3_A Triosephosphate isomera 23.0 86 0.0029 27.2 4.5 38 56-94 175-212 (225)
165 3g1w_A Sugar ABC transporter; 22.3 2.6E+02 0.0087 23.2 7.3 63 14-85 29-93 (305)
166 1pt6_A Integrin alpha-1; cell 22.3 72 0.0025 25.9 3.7 37 53-89 107-149 (213)
167 4avf_A Inosine-5'-monophosphat 22.2 2.3E+02 0.0077 27.0 7.6 91 6-107 228-326 (490)
168 1w0m_A TIM, triosephosphate is 22.0 1.3E+02 0.0044 26.1 5.4 38 56-94 172-209 (226)
169 3qst_A Triosephosphate isomera 21.8 68 0.0023 28.6 3.6 55 34-92 187-241 (255)
170 1uta_A FTSN, MSGA, cell divisi 21.3 1.3E+02 0.0044 21.2 4.5 54 5-65 20-81 (81)
171 3krs_A Triosephosphate isomera 21.2 61 0.0021 29.2 3.2 55 34-92 206-260 (271)
172 4g1k_A Triosephosphate isomera 21.2 94 0.0032 28.0 4.4 50 33-90 209-258 (272)
173 1vzw_A Phosphoribosyl isomeras 21.1 2.5E+02 0.0086 23.3 7.0 72 7-92 33-109 (244)
174 3brq_A HTH-type transcriptiona 20.9 3.4E+02 0.012 22.1 8.1 60 15-85 47-108 (296)
175 1gte_A Dihydropyrimidine dehyd 20.8 1.4E+02 0.0046 31.2 6.2 35 56-92 786-821 (1025)
176 2is8_A Molybdopterin biosynthe 20.2 1.7E+02 0.0057 23.5 5.5 51 7-66 22-72 (164)
No 1
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=100.00 E-value=2.9e-56 Score=437.35 Aligned_cols=235 Identities=35% Similarity=0.529 Sum_probs=221.5
Q ss_pred CcCchHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCc
Q 024420 1 MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE 80 (268)
Q Consensus 1 l~sGv~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~ 80 (268)
++|||++|++++++|.+. ..+.|||+|||||.++++++|++||++ |+++++|++|||||++.|.++.++|++
T Consensus 238 l~~gv~~al~~~~~l~~~-~~~~gIRlDSgd~~~l~~~~r~~ld~~-------G~~~~kI~aSggld~~~i~~l~~~G~~ 309 (494)
T 2f7f_A 238 LKAGVPSAIRVAREMGDK-INFLGVRIDSGDMAYISKRVREQLDEA-------GFTEAKIYASNDLDENTILNLKMQKSK 309 (494)
T ss_dssp TTTHHHHHHHHHHHHGGG-SEEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTCEEEECSSCCHHHHHHHHHTTCC
T ss_pred hhhhHHHHHHHHHHhhhh-cCCeEEEcCCCCHHHHHHHHHHHHHhC-------CCCceEEEEECCCCHHHHHHHHHcCCC
Confidence 358999999999998654 568899999999999999999999997 888999999999999999999999999
Q ss_pred ccEEeecCcccccCCCCccceEEEEeEE---CCc--cccccCCCCCCCCCCccceeeeecc-CCCCeeeeEEecCCCCCC
Q 024420 81 VDAFGIGTYLVTCYAQAALGCVFKLVEI---NKQ--PRIKLSEDVSKVSIPCKKRSYRLYG-KEGYPLVDIMTGENEPPP 154 (268)
Q Consensus 81 id~fGVGT~Lvt~~~~p~l~~vyKLve~---~g~--P~~K~S~~~~K~t~PG~K~vyR~~~-~~g~~~~D~i~l~~e~~~ 154 (268)
+++|||||+|+|+.++|++++|||||++ ||+ |++|+|++++|.|.||+|+|||+|+ .+|++..|+|++.+|+++
T Consensus 310 ~~sfGvGT~Lt~~~~~~~ld~v~Klv~~~~~~G~~~pv~K~s~~~~K~s~pG~k~v~R~~~~~~g~~~~d~i~~~~e~~~ 389 (494)
T 2f7f_A 310 IDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNEDPR 389 (494)
T ss_dssp CCEEEECHHHHTTTTSCCCCCEEEEEEEECTTSSEEECCCCCSSTTSSCCCSCEEEEEEEETTTCCEEEEEEEETTCCGG
T ss_pred EEEEecCcccccCCCCCcccEEEEEEEEEcCCCcCccccccCCCCCCcCCCCceEEEEEeecCCCeEEEEEEEecCCCCc
Confidence 9999999999999999999999999999 999 9999999999999999999999997 578999999999998744
Q ss_pred CCCCceeecCCCCccccccccCccccccceeeecCCCCCCCccccccccccccccCCCCcHHHHHHHHHHHHhcCChhhh
Q 024420 155 KVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHM 234 (268)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~i~~~~~e~LL~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~sL~~iR~~~~~~l~~l~~~~~ 234 (268)
.++++.|+||+++|+++++.++..++||+||| .+| +++.+.|||++||+|++++|++||++++
T Consensus 390 -~~~~~~~~~p~~~~~~~~~~~~~~~~ll~~v~--~~G--------------~~~~~~~~l~eir~~~~~~l~~l~~~~~ 452 (494)
T 2f7f_A 390 -QEEEIYMFHPVHTFINKYVRDFEARPVLQDIF--VEG--------------KRVYELPTLDEIKQYAKENLDSLHEEYK 452 (494)
T ss_dssp -GCSEEEEECSSSTTSEEEEESEEEEECCEEEE--ETT--------------EECCCCCCHHHHHHHHHHHHHHSCHHHH
T ss_pred -cccceeeeCcchhhhhccccCccchhhhhhhh--cCC--------------EEcCCCCCHHHHHHHHHHHHHhCCHHHh
Confidence 36789999999999999999999999999999 578 8999999999999999999999999999
Q ss_pred hccCCcccccccCHHHHHHHHHHHHc
Q 024420 235 RRLNPTPYKVSVSAKLYDFIHFLWLN 260 (268)
Q Consensus 235 r~~~p~~Y~V~ls~~L~~l~~~L~~~ 260 (268)
|+.||++|+|++|++||+++++||.+
T Consensus 453 r~~~p~~y~v~~s~~l~~~~~~~~~~ 478 (494)
T 2f7f_A 453 RDLNPQKYPVDLSTDCWNHKMNLLEK 478 (494)
T ss_dssp CSSSCCCCCEEECHHHHHHHHHHHHH
T ss_pred cccCCcCCccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999974
No 2
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*
Probab=100.00 E-value=6.6e-36 Score=292.56 Aligned_cols=161 Identities=18% Similarity=0.203 Sum_probs=136.9
Q ss_pred CCCccEEeeCCCChHHHHHHHHHHHHHH-hHhhCCCCC---C-CeEEEEeCCCCHHH----HHHHhhcCCcccE--Eeec
Q 024420 19 GYKAVGIRLDSGDLAYLSCEARKFFRTI-EKEFGVPDF---E-KMSITASNDLNEET----LDALNKQGHEVDA--FGIG 87 (268)
Q Consensus 19 G~~l~GVRlDSGDl~~ls~~~R~~ld~~-~~~l~~~G~---~-~vkIi~S~~Lde~~----I~~l~~~g~~id~--fGVG 87 (268)
+.++ |||+|||||+++++++|++||+. |...|.+|+ + +++|++||||||++ |+.|.++|+++|. ||||
T Consensus 305 ~~~l-gVR~DSGD~~~~~~~vr~~Ld~~fG~~~n~~G~kvl~~~~~Ii~Sd~Lde~~~~~ii~~l~~~G~~~d~v~fGvG 383 (484)
T 3dhf_A 305 QAPL-IIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENIAFGSG 383 (484)
T ss_dssp TSCE-EEECCSSCHHHHHHHHHHHHHHHSCCEECTTSCEECCTTEEEEECSSCSHHHHHHHHHHHHHTTBCGGGEEEEES
T ss_pred CCcE-EEECCCCChHHHHHHHHHHHHHHhCCcccccccccCCCCEEEEEcCCCCHHHHHHHHHHHHhCCCCcccceEccc
Confidence 4455 99999999999999999999995 555566798 8 79999999999999 7778889999887 9999
Q ss_pred CcccccCCCCccceEEE--EeEECC--ccccccC-CCCCCCCCCccceeeeeccCCCCeeeeEEecCCCCCCCCCCceee
Q 024420 88 TYLVTCYAQAALGCVFK--LVEINK--QPRIKLS-EDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILC 162 (268)
Q Consensus 88 T~Lvt~~~~p~l~~vyK--Lve~~g--~P~~K~S-~~~~K~t~PG~K~vyR~~~~~g~~~~D~i~l~~e~~~~~~~~~~~ 162 (268)
|+|+|+.++|+++|||| +|++|| +|++|+| +|.+|.|+||+|+|||.. +| |++++.+|..+. .
T Consensus 384 T~L~~~~~~~~l~~v~K~~~v~~~G~~~pv~K~s~td~~K~S~pG~k~v~r~~--~g----~~~~~~~~~~~~-~----- 451 (484)
T 3dhf_A 384 GGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKRSKKGRLSLHRTP--AG----NFVTLEEGKGDL-E----- 451 (484)
T ss_dssp HHHHTSCCTTTTTEEEEEEEEEETTEEEECCCCCTTCGGGCCCCSSCEEEECT--TS----CEEEECTTGGGG-C-----
T ss_pred CccccCCCCCCCCEEEEEEEEEECCccceeeecCCCCCCccCCCcceEEEEeC--CC----cEEEecCCCCCc-c-----
Confidence 99999999999999999 778899 7999999 578999999999999962 34 678887764211 0
Q ss_pred cCCCCccccccccCccccccceeeecCCCCCCCccccccccccccccCCCCcHHHHHHHHH
Q 024420 163 RHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCI 223 (268)
Q Consensus 163 ~~p~~~~~~~~i~~~~~e~LL~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~sL~~iR~~~~ 223 (268)
...++||+||| .+| +++ ..|||++||+|++
T Consensus 452 --------------~~~~~lL~~v~--~~G--------------~~~-~~~~l~eiR~~~~ 481 (484)
T 3dhf_A 452 --------------EYGQDLLHTVF--KNG--------------KVT-KSYSFDEIRKNAQ 481 (484)
T ss_dssp --------------SSCCCSCEEEE--ETT--------------EEC-CCCCHHHHHHHTC
T ss_pred --------------ccccccchhhe--ECC--------------EEc-CCCCHHHHHHHHh
Confidence 01368999999 578 888 4589999999975
No 3
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=100.00 E-value=3.6e-35 Score=281.02 Aligned_cols=171 Identities=26% Similarity=0.388 Sum_probs=151.1
Q ss_pred CchHHHHHHHHHHhhcCCCccEEeeCC-----CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhc
Q 024420 3 SGVPNFCAVALALNDLGYKAVGIRLDS-----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (268)
Q Consensus 3 sGv~nai~Va~~L~~~G~~l~GVRlDS-----GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~ 77 (268)
.++++|++++++| |..+.|||+|| ||+.++++++|++||++ |+++++|++|||||++.|.++.++
T Consensus 219 ~~~~~al~~~~~~---~~~~d~IrlDs~~~~~gd~~~~v~~~r~~ld~~-------G~~~~~I~aSggl~~~~i~~l~~~ 288 (395)
T 2i14_A 219 DEKVEAVMAAEAL---GKKLFAVRLDTPSSRRGNFRKIIEEVRWELKVR-------GYDWVKIFVSGGLDEEKIKEIVDV 288 (395)
T ss_dssp CHHHHHHHHHTTT---GGGCCEEEECCCTTTCSCHHHHHHHHHHHHHHT-------TCCSCEEEEESSCCHHHHHTTGGG
T ss_pred HHHHHHHHHHHHh---ccCCcEEEeCCCCCCcccHHHHHHHHHHHHHhC-------CCCceEEEEECCCCHHHHHHHHHh
Confidence 4689999999765 46688999999 99999999999999997 888999999999999999999988
Q ss_pred CCcccEEeecCcccccCCCCccceEEEEeEECCccccccCCCCCCCCCCccceeeeeccCCCCeeeeEEecCCCCCCCCC
Q 024420 78 GHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVG 157 (268)
Q Consensus 78 g~~id~fGVGT~Lvt~~~~p~l~~vyKLve~~g~P~~K~S~~~~K~t~PG~K~vyR~~~~~g~~~~D~i~l~~e~~~~~~ 157 (268)
+|+|||||.+.+ +|++++|||+|++||+|++|+| ++||+|+|||+|+ | .|+|++.+|+++.
T Consensus 289 ---vD~~gvGt~l~~---~~~ld~~~klv~~~g~p~~K~s------~~pG~k~~~R~~~--~---~d~~~~~~e~~~~-- 349 (395)
T 2i14_A 289 ---VDAFGVGGAIAS---AKPVDFALDIVEVEGKPIAKRG------KLSGRKQVYRCEN--G---HYHVVPANKKLER-- 349 (395)
T ss_dssp ---CSEEEECHHHHT---CCCCCCEEEEEEETTEECCCTT------SCCSCEEEEEETT--S---CEEEEETTSCCCB--
T ss_pred ---CCEEEeCcccCC---CCCccEEEEEEEeCCcceeeec------CCCCceEEEEEcC--C---ceEEEeCCCCCcc--
Confidence 999999999974 8999999999999999999998 5899999999996 4 4999999886432
Q ss_pred CceeecCCCCccccccccCccccccceeeecCCCCCCCccccccccccccccCCCCcHHHHHHHHHHHHhcCChh
Q 024420 158 ERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPD 232 (268)
Q Consensus 158 ~~~~~~~p~~~~~~~~i~~~~~e~LL~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~sL~~iR~~~~~~l~~l~~~ 232 (268)
. | ..+...++||+||| .+| +++.+.|||++||+|+++||++||++
T Consensus 350 ~------~--------~~~~~~~~ll~~~~--~~G--------------~~~~~~~~l~~~r~~~~~~l~~l~~~ 394 (395)
T 2i14_A 350 C------P--------VCNAKVEPLLKPII--ENG--------------EIVVEFPKAREIREYVLEQAKKFNLE 394 (395)
T ss_dssp C------S--------SSCCBEEECCEEEE--BTT--------------BCCCCCCCHHHHHHHHHHHHHHTTCC
T ss_pred c------c--------cccccccchhhhhh--cCC--------------EECCCCCCHHHHHHHHHHHHHhCCCC
Confidence 0 1 11235689999999 578 89999999999999999999999876
No 4
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=100.00 E-value=1.8e-34 Score=276.51 Aligned_cols=169 Identities=27% Similarity=0.372 Sum_probs=148.9
Q ss_pred CchHHHHHHHHHHhhcCCCccEEeeCC-----CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhc
Q 024420 3 SGVPNFCAVALALNDLGYKAVGIRLDS-----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (268)
Q Consensus 3 sGv~nai~Va~~L~~~G~~l~GVRlDS-----GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~ 77 (268)
.++++|+++|++| ..+.|||+|| ||+.++++++|++||++ |+++++|++|||||++.|.++.++
T Consensus 222 ~~~~~al~~a~~l----~~~d~IrlDs~~~~~gd~~~~v~~v~~~ld~~-------G~~~~~I~aSggl~~~~i~~l~~~ 290 (398)
T 2i1o_A 222 DEKFAAIKIAEMF----DKVDYIRLDTPSSRRGNFEALIREVRWELALR-------GRSDIKIMVSGGLDENTVKKLREA 290 (398)
T ss_dssp CHHHHHHHHHTTC----SCCCEEEECCCGGGCSCHHHHHHHHHHHHHHT-------TCTTSEEEEESSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh----cCCcEEEeCCCCCCcccHHHHHHHHHHHHHhC-------CCCceEEEEeCCCCHHHHHHHHHc
Confidence 3689999999876 3688999999 99999999999999997 888899999999999999999999
Q ss_pred CCcccEEeecCcccccCCCCccceEEEEeEECCccccccCCCCCCCCCCccceeeeeccCCCCeeeeE-EecCCCCCCCC
Q 024420 78 GHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDI-MTGENEPPPKV 156 (268)
Q Consensus 78 g~~id~fGVGT~Lvt~~~~p~l~~vyKLve~~g~P~~K~S~~~~K~t~PG~K~vyR~~~~~g~~~~D~-i~l~~e~~~~~ 156 (268)
|+ |+|||||.+.+ +|++++|||+|++||+|++|+| ++||+|+|||+|+ | .|+ +++.+|++|..
T Consensus 291 Gv--D~~gvGt~l~~---~~~ld~~~Klv~~~g~p~~K~s------~~pG~k~~~r~~~--~---~d~~~~~~~~~~~~~ 354 (398)
T 2i1o_A 291 GA--EAFGVGTSISS---AKPFDFAMDIVEVNGKPETKRG------KMSGRKNVLRCTS--C---HRIEVVPANVQEKTC 354 (398)
T ss_dssp TC--CEEEECHHHHT---CCCCCEEEEEEEETTEECCCTT------SCCSCEEEEEETT--T---CCEEEEETTCCEECC
T ss_pred CC--CEEEeCcccCC---CCCccEEEEEEEeCCcceEeec------CCCCceEEEEEcC--C---CeEEEEecCCCCccc
Confidence 85 99999999975 8999999999999999999998 5899999999996 3 499 99998753310
Q ss_pred CCceeecCCCCccccccccCccccccceeeecCCCCCCCccccccccccccccCCCCcHHHHHHHHHHHHhcCCh
Q 024420 157 GERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRP 231 (268)
Q Consensus 157 ~~~~~~~~p~~~~~~~~i~~~~~e~LL~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~sL~~iR~~~~~~l~~l~~ 231 (268)
..+...++||+||| .+| +++.+.|||++||+|+++||++||.
T Consensus 355 -----------------~~~~~~~~ll~~~~--~~G--------------~~~~~~~~l~~~r~~~~~~l~~l~~ 396 (398)
T 2i1o_A 355 -----------------ICGGSMQNLLVKYL--SHG--------------KRTSEYPRPKEIRSRSMKELEYFKD 396 (398)
T ss_dssp -----------------SSSSCEEECCEEEE--ETT--------------EESSCCCCHHHHHHHHHHHGGGGC-
T ss_pred -----------------ccCccccchhhhhe--eCC--------------EEcCCCCCHHHHHHHHHHHHHhCcC
Confidence 11234689999999 578 8999999999999999999999964
No 5
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=99.97 E-value=6.1e-32 Score=258.75 Aligned_cols=122 Identities=21% Similarity=0.198 Sum_probs=110.6
Q ss_pred chHHHHHHH-HHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCC-eE-EEEeCCCCHHHHHHHhh--cC
Q 024420 4 GVPNFCAVA-LALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEK-MS-ITASNDLNEETLDALNK--QG 78 (268)
Q Consensus 4 Gv~nai~Va-~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~-vk-Ii~S~~Lde~~I~~l~~--~g 78 (268)
+..+|++.+ +++ +..+.|||+|||||+++++++|++||++ |+++ +| |++||||||++|.+|.+ +|
T Consensus 253 d~~~fl~~~~~~~---~~~~~gVR~DSGD~~~~~~~~r~~ld~~-------G~~~~~k~Ii~SdgLd~~~i~~l~~~~~g 322 (394)
T 2im5_A 253 TTDVFMRNFSKKH---AMLFTSLRHDSGDPEIFIEKAVRRYEEL-------RVDPKIKYIIFSDSLTPQRAIEIQKLCAG 322 (394)
T ss_dssp CHHHHHHHCCHHH---HHHCCEEEECSSCHHHHHHHHHHHHHHT-------TCCGGGCEEEECSSCCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHh---hhcceEEEcCCCCHHHHHHHHHHHHHHc-------CcCcCccEEEEcCCCCHHHHHHHHHHhcC
Confidence 456666643 333 3457899999999999999999999997 8877 99 99999999999999999 89
Q ss_pred CcccEEeecCcccccCC--CCccceEEEEeEEC------CccccccCCCCCCCCCCccceeeeecc
Q 024420 79 HEVDAFGIGTYLVTCYA--QAALGCVFKLVEIN------KQPRIKLSEDVSKVSIPCKKRSYRLYG 136 (268)
Q Consensus 79 ~~id~fGVGT~Lvt~~~--~p~l~~vyKLve~~------g~P~~K~S~~~~K~t~PG~K~vyR~~~ 136 (268)
+++|+|||||+|+|+.+ +|+++||||||+++ |+|++|+|++++|.|.| .|+|||+..
T Consensus 323 ~~~d~FGvGT~L~~~~~~~~~~l~~V~Klv~~~~~~~~~g~p~~KlS~~~~K~t~p-~k~v~r~~~ 387 (394)
T 2im5_A 323 RIKASFGIGTNLTNDVGGGVEPLNIVMKLWKCKMTAKDDWHYCVKLSDVDGKHTGE-PEEILLAMN 387 (394)
T ss_dssp TSEEEEEECHHHHSCCSTTCCCCCEEEEEEEEESSTTSCCEECCBCCSSTTCCBSC-HHHHHHHHH
T ss_pred CCceEEEeCcccccCCCCCCCccceEeeeeeecccccCCCCceEEecCCCCCccCC-HHHHHHHHH
Confidence 99999999999999998 99999999999998 99999999999999999 999999874
No 6
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2
Probab=99.97 E-value=1.2e-31 Score=257.61 Aligned_cols=122 Identities=20% Similarity=0.239 Sum_probs=104.8
Q ss_pred chHHHHH-HHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCC-e-EEEEeCCCCHHHHHHHhh--cC
Q 024420 4 GVPNFCA-VALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEK-M-SITASNDLNEETLDALNK--QG 78 (268)
Q Consensus 4 Gv~nai~-Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~-v-kIi~S~~Lde~~I~~l~~--~g 78 (268)
+..+|++ +.+++ +..+.|||+|||||.++++++|++||++ |+++ + +|++||||||++|.+|.+ +|
T Consensus 267 d~~~fl~~~~~~~---~~~~~GVR~DSGD~~~~~~~~r~~ld~~-------G~~~~~K~Iv~SdgLde~~i~~l~~~~~~ 336 (408)
T 1yir_A 267 TTDAFLRDFDLYF---AKLFDGLRHDSGDPLLWAEKTIAHYLKL-------GIDPLTKTLVFSDGLDLPRALKIYRALQG 336 (408)
T ss_dssp CHHHHHHHCCHHH---HHHCCEEEECSSCHHHHHHHHHHHHHHH-------TCCGGGSEEEECSSCCHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHh---hhcceEEEeCCCCHHHHHHHHHHHHHHc-------CCCCCceEEEECCCCCHHHHHHHHHHhcC
Confidence 3445555 22333 3457899999999999999999999998 7876 8 799999999999999998 89
Q ss_pred CcccEEeecCcccccC-CCCccceEEEEeEECCccccccCCCCCCCC--CCccceeeeec
Q 024420 79 HEVDAFGIGTYLVTCY-AQAALGCVFKLVEINKQPRIKLSEDVSKVS--IPCKKRSYRLY 135 (268)
Q Consensus 79 ~~id~fGVGT~Lvt~~-~~p~l~~vyKLve~~g~P~~K~S~~~~K~t--~PG~K~vyR~~ 135 (268)
+++|+|||||+|+|+. ++|+++||||||++||+|++|+|++++|.| .||.|++||.+
T Consensus 337 ~~~d~FGVGT~L~~~~~~~~~l~~V~Klv~~nG~pv~K~S~~~~K~t~~~pg~~~~~r~~ 396 (408)
T 1yir_A 337 RINVSFGIGTHFTCDLPGVEPMNIVVKMSACNGHPVAKISDTPGKAQCRDPDFIHYLKHV 396 (408)
T ss_dssp TSEEEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSCC-------CHHHHHHHHH
T ss_pred CCceEEEeChhhccCCCCCCccceEEEEEEECCeeeEecCCCCCCcCCCCccceeeEeee
Confidence 9999999999999998 899999999999999999999999999999 99999999976
No 7
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=99.96 E-value=4.2e-31 Score=256.63 Aligned_cols=111 Identities=21% Similarity=0.249 Sum_probs=102.6
Q ss_pred CccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCC--CeEEEEeCCCCHHHHHHHhh--cCCcccEEeecCcccc----
Q 024420 21 KAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFE--KMSITASNDLNEETLDALNK--QGHEVDAFGIGTYLVT---- 92 (268)
Q Consensus 21 ~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~--~vkIi~S~~Lde~~I~~l~~--~g~~id~fGVGT~Lvt---- 92 (268)
++.|||+|||||+++++++|++||++ |++ +++||+||||||++|.+|.+ +|+++|+|||||+|+|
T Consensus 307 ~~~GVR~DSGDp~~~~~~~r~~ld~~-------G~~p~~~~Ii~SdgLd~~~i~~l~~~~~g~~~d~FGVGT~L~~d~~~ 379 (449)
T 1ybe_A 307 DWTGFRPDSAPPIEGGEKIIEWWRKM-------GRDPRTKMLIFSDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTNDFAG 379 (449)
T ss_dssp GSSEECCCSSCHHHHHHHHHHHHHHT-------TCCGGGSEEEECTTCCHHHHHHHHHHHTTTSEEEEEECHHHHCCCTT
T ss_pred ccceEecCCCCHHHHHHHHHHHHHHc-------CCCcCceEEEEeCCCCHHHHHHHHHHhcCCCceEEEeChhhccCccc
Confidence 48899999999999999999999997 887 89999999999999999998 8999999999999999
Q ss_pred -----cCCCCccceEEEEeEECCccccccCCCCCCCCCCccceeeeeccCCC
Q 024420 93 -----CYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEG 139 (268)
Q Consensus 93 -----~~~~p~l~~vyKLve~~g~P~~K~S~~~~K~t~PG~K~vyR~~~~~g 139 (268)
+.++|+++||||||++||+|++|+|++++|.| ||.|+|||++...|
T Consensus 380 ~~~~~~~~~~~l~~V~Klv~~nG~pv~K~S~~~~K~t-~g~k~v~r~~~~~g 430 (449)
T 1ybe_A 380 CAPKTIASLKPISIVCKVSDANGRPAVKLSDNPQKAT-GDPAEVERYLKFFG 430 (449)
T ss_dssp CCC-----CCCCCEEEEEEEETTEECCBCCSSGGGCB-SCHHHHHHHHHHHC
T ss_pred ccccccCCCCccceEEEEeeecCcceeecCCCCCCCC-CCHHHHHHHHhhcC
Confidence 44799999999999999999999999999999 99999999985433
No 8
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}
Probab=99.96 E-value=8e-31 Score=252.03 Aligned_cols=117 Identities=28% Similarity=0.288 Sum_probs=105.7
Q ss_pred chHHHHHHHH-HHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCC--CeEEEEeCCCCHHHHHHHhh--cC
Q 024420 4 GVPNFCAVAL-ALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFE--KMSITASNDLNEETLDALNK--QG 78 (268)
Q Consensus 4 Gv~nai~Va~-~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~--~vkIi~S~~Lde~~I~~l~~--~g 78 (268)
|++|||+++. ++ |.++.|||+|||||+++++++|++||++ |++ +++|++||||||++|.+|.+ +|
T Consensus 262 ~~~~~l~~~~~~~---~~~~~GVR~DSGD~~~~~~k~r~~ld~~-------G~~p~~~~Ii~SdgLde~~i~~l~~~~~~ 331 (407)
T 3os4_A 262 TMDAFLRDFDLAF---ANRYQGLRHDSGDPIEWGEKAIAHYEKL-------GIDPMKKVLVFSDNLDLEKALFLYRHFYQ 331 (407)
T ss_dssp CHHHHHHHCCHHH---HHHSCEEEECSSCHHHHHHHHHHHHHHT-------TCCGGGSEEEECSSCCHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHh---cccCeEEEcCCCChHHHHHHHHHHHHHC-------CcCcCceEEEECCCCCHHHHHHHHHHhcC
Confidence 6899999983 33 4568899999999999999999999997 776 57999999999999999987 88
Q ss_pred CcccEEeecCcccccCC-CCccceEEEEeEECCccccccCCCCCCCC--CCccce
Q 024420 79 HEVDAFGIGTYLVTCYA-QAALGCVFKLVEINKQPRIKLSEDVSKVS--IPCKKR 130 (268)
Q Consensus 79 ~~id~fGVGT~Lvt~~~-~p~l~~vyKLve~~g~P~~K~S~~~~K~t--~PG~K~ 130 (268)
+++|+|||||+|+|+.+ +|+++||||||++||+|++|+|++++|.| .|+..+
T Consensus 332 ~~~d~fGVGT~L~~~~~~~~~l~~V~Klv~~~G~P~~KlSd~~~K~~~~~~~~~~ 386 (407)
T 3os4_A 332 RIKLVFGIGTRLTCDIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTICQDPAFVD 386 (407)
T ss_dssp TSEEEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSSTTCCCCCCHHHHH
T ss_pred CCCcEEeechheeeCCCCCCCcceEEEEEEECCcceeEecCCCccccCCCHHHHH
Confidence 99999999999999998 99999999999999999999999999997 454443
No 9
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae}
Probab=99.96 E-value=5.1e-30 Score=248.72 Aligned_cols=113 Identities=24% Similarity=0.276 Sum_probs=102.5
Q ss_pred chHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCC-CeE-EEEeCCCCHHHHHHHhh--cCC
Q 024420 4 GVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFE-KMS-ITASNDLNEETLDALNK--QGH 79 (268)
Q Consensus 4 Gv~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~-~vk-Ii~S~~Lde~~I~~l~~--~g~ 79 (268)
|++||++++.. ..|.++.|||+|||||+++++++|++||++ |++ ++| |++||||||++|.+|.+ +|+
T Consensus 272 ~~~~fl~~~~~--~~~~~~~GVR~DSGDp~~~~~k~r~~ld~~-------G~~~~~K~Iv~SdgLde~~i~~L~~~~~~~ 342 (446)
T 4hl7_A 272 TIDAFLNDFNR--HLANAYDGVRHDSGCPFRWGDKMIAHYQQL-------GIDPTTKLFIFSDGLDFDQALELCEYFAGR 342 (446)
T ss_dssp CHHHHHHHCCH--HHHHHSCEEEECSSCHHHHHHHHHHHHHHT-------TCCGGGSEEEECSSCCHHHHHHHHHHHTTT
T ss_pred CcHHHHHHHHH--HhcccccEEecCCCChHHHHHHHHHHHHHc-------CCCCCCcEEEEcCCCCHHHHHHHHHHhcCC
Confidence 68899998732 335678899999999999999999999997 785 785 99999999999999975 789
Q ss_pred cccEEeecCcccccCC---------CCccceEEEEeEECCccccccCCCCCCCCC
Q 024420 80 EVDAFGIGTYLVTCYA---------QAALGCVFKLVEINKQPRIKLSEDVSKVSI 125 (268)
Q Consensus 80 ~id~fGVGT~Lvt~~~---------~p~l~~vyKLve~~g~P~~K~S~~~~K~t~ 125 (268)
++|+|||||+|+|+.+ +|+|++|||||+++|+|++|+|++++|.|.
T Consensus 343 ~~d~FGVGT~L~~~~~~~~~~~~~~~~~l~~VyKLve~~G~P~~KlSd~~gK~t~ 397 (446)
T 4hl7_A 343 VKISFGIGTFLTNDLANWRNAAGVEYRPLSIVIKLAECQGRPVAKISDQPEKAMC 397 (446)
T ss_dssp SEEEEEECHHHHSCCTTCBCTTCCBCCCCEEEEEEEEETTEECCBCCSSGGGCBC
T ss_pred CCcEEEeccceeccCcccccccccCCCCceeEEEEEEECCcceeEecCCcccccC
Confidence 9999999999999987 899999999999999999999999999983
No 10
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=99.96 E-value=4.1e-30 Score=249.26 Aligned_cols=121 Identities=26% Similarity=0.355 Sum_probs=106.5
Q ss_pred chHHHHHHH-HHHhhcCCCccEEeeCCCChHHHHHHHHHHH-HHHhHhhCCCCCCC-eE-EEEeCCCCHHHHHHHh---h
Q 024420 4 GVPNFCAVA-LALNDLGYKAVGIRLDSGDLAYLSCEARKFF-RTIEKEFGVPDFEK-MS-ITASNDLNEETLDALN---K 76 (268)
Q Consensus 4 Gv~nai~Va-~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~l-d~~~~~l~~~G~~~-vk-Ii~S~~Lde~~I~~l~---~ 76 (268)
|..+|++.+ ++| +..+.|||+|||||+++++++|++| |++ |+++ +| |++||||||++|.+|. +
T Consensus 286 d~~~fL~~~~~~l---~~~~~GVR~DSGDp~~~~~~~r~~l~d~~-------G~~~~~k~Ii~SdgLd~~~i~~l~~~~~ 355 (441)
T 1vlp_A 286 GTDDFLKSFRPPY---SDAYVGVRQDSGDPVEYTKKISHHYHDVL-------KLPKFSKIICYSDSLNVEKAITYSHAAK 355 (441)
T ss_dssp CHHHHHTTCCTTH---HHHSCEEEECSSCHHHHHHHHHHHHHTTS-------CCCTTSSEEEECSSCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHh---hhcceEEEcCCCCHHHHHHHHHHHHHHHc-------CCCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 455666655 333 4567899999999999999999999 886 7887 89 9999999999999999 6
Q ss_pred cCCcccEEeecCcccccC--------CCCccceEEEEeEECCccccccCCCCCCCCCCccceeeeec
Q 024420 77 QGHEVDAFGIGTYLVTCY--------AQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLY 135 (268)
Q Consensus 77 ~g~~id~fGVGT~Lvt~~--------~~p~l~~vyKLve~~g~P~~K~S~~~~K~t~PG~K~vyR~~ 135 (268)
+|+++|+|||||+|+|+. ++|+++||||||++||+|++|+|++++|.|.| .+.|.|+-
T Consensus 356 ~~~~~d~FGVGT~L~~~~~~~~~~~~~~~~l~~V~Klv~~nG~p~~KlS~~~~K~t~~-~~~~~~~~ 421 (441)
T 1vlp_A 356 ENGMLATFGIGTNFTNDFRKKSEPQVKSEPLNIVIKLLEVNGNHAIKISDNLGKNMGD-PATVKRVK 421 (441)
T ss_dssp HTTCEEEEEECHHHHSCEECSSSTTSEECCCCEEEEEEEETTEECCBCCSSTTCCBSC-HHHHHHHH
T ss_pred cCCceEEEEeCchheecccccccccCCCCCcceEEEEEEECCeeeEEecCCCCCccCC-HHHHHHHH
Confidence 899999999999999955 68999999999999999999999999999999 66666653
No 11
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=99.05 E-value=2.2e-10 Score=105.89 Aligned_cols=81 Identities=21% Similarity=0.242 Sum_probs=63.6
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
..+|++|++++.++.+ +++.++. ++++++|.+|||+|++.|.++.+.|+ |.||||+.+ + ++|++++
T Consensus 218 aD~I~ld~~~~~~l~~-~v~~l~~--------~~~~~~I~ASGGIt~~ni~~~~~aGa--D~i~vGs~i-~--~a~~~D~ 283 (299)
T 2jbm_A 218 ADLVLLDNFKPEELHP-TATVLKA--------QFPSVAVEASGGITLDNLPQFCGPHI--DVISMGMLT-Q--AAPALDF 283 (299)
T ss_dssp CSEEEEESCCHHHHHH-HHHHHHH--------HCTTSEEEEESSCCTTTHHHHCCTTC--CEEECTHHH-H--SCCCCCE
T ss_pred CCEEEECCCCHHHHHH-HHHHhhc--------cCCCeeEEEECCCCHHHHHHHHHCCC--CEEEEChhh-c--CCCCcce
Confidence 6799999999988764 4457765 57889999999999999999999885 999999944 3 3699999
Q ss_pred EEEEeEECCcccccc
Q 024420 102 VFKLVEINKQPRIKL 116 (268)
Q Consensus 102 vyKLve~~g~P~~K~ 116 (268)
+||+++++|+|++|+
T Consensus 284 s~~i~~~~g~p~~K~ 298 (299)
T 2jbm_A 284 SLKLFAKEVAPVPKI 298 (299)
T ss_dssp EEEEEEEC-------
T ss_pred EEEEEEeCCcccccc
Confidence 999999999999997
No 12
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=98.63 E-value=2.4e-08 Score=92.04 Aligned_cols=75 Identities=16% Similarity=0.106 Sum_probs=43.2
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
..+||+|++++.++. +++++++..+ +||++++|.+|||+|++.|.++.+.|+ |.||||+.+ .+.|++|+
T Consensus 220 aD~I~ld~~~~~~l~-~~v~~l~~~~-----~g~~~v~I~ASGGIt~~ni~~~~~~Gv--D~i~vGs~i---~~a~~~D~ 288 (294)
T 3c2e_A 220 ADVIMLDNFKGDGLK-MCAQSLKNKW-----NGKKHFLLECSGGLNLDNLEEYLCDDI--DIYSTSSIH---QGTPVIDF 288 (294)
T ss_dssp CSEEECCC---------------------------CCEEEEECCCCC------CCCSC--SEEECGGGT---SSCCCCCE
T ss_pred CCEEEECCCCHHHHH-HHHHHhcccc-----cCCCCeEEEEECCCCHHHHHHHHHcCC--CEEEEechh---cCCCCCce
Confidence 679999999988774 4456666520 168999999999999999999999885 999999985 34799999
Q ss_pred EEEEeE
Q 024420 102 VFKLVE 107 (268)
Q Consensus 102 vyKLve 107 (268)
+||+||
T Consensus 289 s~~i~~ 294 (294)
T 3c2e_A 289 SLKLAH 294 (294)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999985
No 13
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=98.38 E-value=6.9e-07 Score=82.83 Aligned_cols=69 Identities=26% Similarity=0.332 Sum_probs=57.8
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
..+||+|++++..+.+.++.+ ..+++|.+|||+|++.|.++.+.| +|.|+||+ +++ +.|++|+
T Consensus 230 aD~I~LDn~~~~~l~~av~~i------------~~~v~ieaSGGI~~~~i~~~a~tG--VD~isvG~-lt~--sa~~lD~ 292 (298)
T 3gnn_A 230 ARSVLLDNFTLDMMRDAVRVT------------EGRAVLEVSGGVNFDTVRAIAETG--VDRISIGA-LTK--DVRATDY 292 (298)
T ss_dssp CEEEEEESCCHHHHHHHHHHH------------TTSEEEEEESSCSTTTHHHHHHTT--CSEEECGG-GGT--SCCCCCE
T ss_pred CCEEEECCCCHHHHHHHHHHh------------CCCCeEEEEcCCCHHHHHHHHHcC--CCEEEECC-eec--CCCccce
Confidence 679999999998877666543 157999999999999999999887 59999999 333 4899999
Q ss_pred EEEEeE
Q 024420 102 VFKLVE 107 (268)
Q Consensus 102 vyKLve 107 (268)
.||++|
T Consensus 293 sl~i~e 298 (298)
T 3gnn_A 293 SMRIVE 298 (298)
T ss_dssp EEEEC-
T ss_pred EEEEeC
Confidence 999986
No 14
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=98.31 E-value=1.1e-06 Score=82.22 Aligned_cols=69 Identities=22% Similarity=0.280 Sum_probs=56.8
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
..+||+|++++..+.+.+ +.++ .+++|.+|||+|++.|.++.+.| +|.|+||+ ++. +.|++|+
T Consensus 252 aD~I~LDn~~~~~l~~av-~~l~-----------~~v~ieaSGGIt~~~I~~~a~tG--VD~isvGa-lt~--sa~~lD~ 314 (320)
T 3paj_A 252 ADIIMLDNFSLEMMREAV-KINA-----------GRAALENSGNITLDNLKECAETG--VDYISVGA-LTK--HLKALDL 314 (320)
T ss_dssp CSEEEEESCCHHHHHHHH-HHHT-----------TSSEEEEESSCCHHHHHHHHTTT--CSEEECTH-HHH--SBCCCCE
T ss_pred CCEEEECCCCHHHHHHHH-HHhC-----------CCCeEEEECCCCHHHHHHHHHcC--CCEEEECc-eec--CCCccee
Confidence 679999999998775444 3342 46899999999999999999877 69999999 333 4889999
Q ss_pred EEEEeE
Q 024420 102 VFKLVE 107 (268)
Q Consensus 102 vyKLve 107 (268)
.||++|
T Consensus 315 sl~i~~ 320 (320)
T 3paj_A 315 SMRFKS 320 (320)
T ss_dssp EEEECC
T ss_pred EEEeeC
Confidence 999975
No 15
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.24 E-value=1.3e-06 Score=79.54 Aligned_cols=70 Identities=17% Similarity=0.230 Sum_probs=59.7
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
..+|++|++++..+.+ +++.++. ++++++|.+|||+|++.|.++.+.|+ |.+|||+.+. +.|++|+
T Consensus 203 aD~I~ld~~~~~~l~~-~v~~l~~--------~~~~~~i~AsGGI~~~ni~~~~~aGa--D~i~vGs~i~---~a~~~D~ 268 (273)
T 2b7n_A 203 ADIVMCDNLSVLETKE-IAAYRDA--------HYPFVLLEASGNISLESINAYAKSGV--DAISVGALIH---QATFIDM 268 (273)
T ss_dssp CSEEEEETCCHHHHHH-HHHHHHH--------HCTTCEEEEESSCCTTTHHHHHTTTC--SEEECTHHHH---TCCCCCE
T ss_pred CCEEEECCCCHHHHHH-HHHHhhc--------cCCCcEEEEECCCCHHHHHHHHHcCC--cEEEEcHHhc---CCCCCce
Confidence 6789999999987764 4447765 57889999999999999999999885 9999999864 4789999
Q ss_pred EEEE
Q 024420 102 VFKL 105 (268)
Q Consensus 102 vyKL 105 (268)
.+|+
T Consensus 269 s~~i 272 (273)
T 2b7n_A 269 HMKM 272 (273)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9986
No 16
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.85 E-value=1.6e-05 Score=73.32 Aligned_cols=67 Identities=21% Similarity=0.264 Sum_probs=55.1
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
..+|++|++++..+.+.++ +++ .+++|.+|||+|++.|.++.+.|+ |.||||+ +++ +.|++|+
T Consensus 229 aD~I~ld~~~~e~l~~~v~-~~~-----------~~~~I~ASGGIt~~~i~~~a~~Gv--D~isvGs-li~--~a~~~D~ 291 (296)
T 1qap_A 229 ADIIMLDNFNTDQMREAVK-RVN-----------GQARLEVSGNVTAETLREFAETGV--DFISVGA-LTK--HVRALDL 291 (296)
T ss_dssp CSEEEESSCCHHHHHHHHH-TTC-----------TTCCEEECCCSCHHHHHHHHHTTC--SEEECSH-HHH--EEECCCE
T ss_pred CCEEEECCCCHHHHHHHHH-HhC-----------CCCeEEEECCCCHHHHHHHHHcCC--CEEEEeH-HHc--CCCCCce
Confidence 6799999999988765443 321 358999999999999999999985 9999999 443 3789999
Q ss_pred EEEE
Q 024420 102 VFKL 105 (268)
Q Consensus 102 vyKL 105 (268)
.+|+
T Consensus 292 sl~i 295 (296)
T 1qap_A 292 SMRF 295 (296)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9986
No 17
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.76 E-value=0.0042 Score=56.93 Aligned_cols=70 Identities=19% Similarity=0.155 Sum_probs=55.1
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
...|++|.-++.. .+++++.++.. +++++|.+|||++++.|.++.+.| +|.++||+ ++++ .|++|+
T Consensus 215 aD~I~LDn~~~~~-~~~~v~~l~~~--------~~~v~ieaSGGIt~~~i~~~a~tG--VD~isvG~-l~~~--a~~~D~ 280 (284)
T 1qpo_A 215 PELILLDNFAVWQ-TQTAVQRRDSR--------APTVMLESSGGLSLQTAATYAETG--VDYLAVGA-LTHS--VRVLDI 280 (284)
T ss_dssp CSEEEEETCCHHH-HHHHHHHHHHH--------CTTCEEEEESSCCTTTHHHHHHTT--CSEEECGG-GTSS--BCCCCE
T ss_pred CCEEEECCCCHHH-HHHHHHHhhcc--------CCCeEEEEECCCCHHHHHHHHhcC--CCEEEECH-HHcC--CCCcce
Confidence 4588888887644 45666666653 367899999999999999999987 89999999 4443 688999
Q ss_pred EEEE
Q 024420 102 VFKL 105 (268)
Q Consensus 102 vyKL 105 (268)
.+|+
T Consensus 281 sl~i 284 (284)
T 1qpo_A 281 GLDM 284 (284)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8874
No 18
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=96.55 E-value=0.0035 Score=57.75 Aligned_cols=68 Identities=18% Similarity=0.225 Sum_probs=52.2
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
...|++|..++..+. +..... + .+++|.+|||++++.|.++.+.| +|.++||+- +++ .|++|+
T Consensus 219 aD~I~LDn~~~~~l~----~av~~~------~--~~v~ieaSGGIt~~~i~~~a~tG--VD~IsvGal-t~s--a~~lD~ 281 (287)
T 3tqv_A 219 ADIVMLDNFSGEDID----IAVSIA------R--GKVALEVSGNIDRNSIVAIAKTG--VDFISVGAI-TKH--IKAIDL 281 (287)
T ss_dssp CSEEEEESCCHHHHH----HHHHHH------T--TTCEEEEESSCCTTTHHHHHTTT--CSEEECSHH-HHS--BCCCCE
T ss_pred CCEEEEcCCCHHHHH----HHHHhh------c--CCceEEEECCCCHHHHHHHHHcC--CCEEEEChh-hcC--Ccccce
Confidence 679999999986543 233222 1 47899999999999999999877 789999754 443 789999
Q ss_pred EEEEe
Q 024420 102 VFKLV 106 (268)
Q Consensus 102 vyKLv 106 (268)
.+|+.
T Consensus 282 sl~i~ 286 (287)
T 3tqv_A 282 SLQVQ 286 (287)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 99863
No 19
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.23 E-value=0.0089 Score=54.81 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=55.5
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
...|.+|.-++..+ +++++.++.. +++++|.+|||++++.|.++.+.| +|.++||+-... .|++|+
T Consensus 214 aD~I~LDn~~~e~l-~~av~~l~~~--------~~~v~ieASGGIt~eni~~~a~tG--VD~IsvGslt~s---a~~~D~ 279 (285)
T 1o4u_A 214 ADIVMLDNLSPEEV-KDISRRIKDI--------NPNVIVEVSGGITEENVSLYDFET--VDVISSSRLTLQ---EVFVDL 279 (285)
T ss_dssp CSEEEEESCCHHHH-HHHHHHHHHH--------CTTSEEEEEECCCTTTGGGGCCTT--CCEEEEGGGTSS---CCCCCE
T ss_pred CCEEEECCCCHHHH-HHHHHHhhcc--------CCCceEEEECCCCHHHHHHHHHcC--CCEEEEeHHHcC---CCCcce
Confidence 45788888776554 4556666653 356899999999999999998877 899999995433 789999
Q ss_pred EEEEe
Q 024420 102 VFKLV 106 (268)
Q Consensus 102 vyKLv 106 (268)
.+|++
T Consensus 280 sl~i~ 284 (285)
T 1o4u_A 280 SLEIQ 284 (285)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99975
No 20
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=96.19 E-value=0.015 Score=53.90 Aligned_cols=67 Identities=18% Similarity=0.210 Sum_probs=51.8
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
...|++|--++..+ ++..... + .+++|.+|||++++.|.++.+.| +|.+++| .|+++ .|++|+
T Consensus 228 aDiImLDn~s~~~l----~~av~~~------~--~~v~leaSGGIt~~~i~~~A~tG--VD~IsvG-alths--a~~lDi 290 (300)
T 3l0g_A 228 VDMILLDNMSISEI----KKAVDIV------N--GKSVLEVSGCVNIRNVRNIALTG--VDYISIG-CITNS--FQNKDI 290 (300)
T ss_dssp CSEEEEESCCHHHH----HHHHHHH------T--TSSEEEEESSCCTTTHHHHHTTT--CSEEECG-GGTSS--CCCCCE
T ss_pred CCEEEECCCCHHHH----HHHHHhh------c--CceEEEEECCCCHHHHHHHHHcC--CCEEEeC-ccccC--CCccee
Confidence 56899999987443 3333332 1 36899999999999999999877 7899999 45443 789999
Q ss_pred EEEE
Q 024420 102 VFKL 105 (268)
Q Consensus 102 vyKL 105 (268)
.+|+
T Consensus 291 sl~i 294 (300)
T 3l0g_A 291 GLDI 294 (300)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9998
No 21
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=94.22 E-value=0.14 Score=46.71 Aligned_cols=46 Identities=26% Similarity=0.412 Sum_probs=39.4
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccceEEEEeE
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVE 107 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~vyKLve 107 (268)
++.|++|||++++.|.++.+.| +|.++||+ +++ +.|++|+.+|+++
T Consensus 240 ~ipi~AsGGIt~eni~~~a~tG--vD~IsVgs-~~~--~a~~~D~sl~i~~ 285 (286)
T 1x1o_A 240 RVPLEASGNMTLERAKAAAEAG--VDYVSVGA-LTH--SAKALDLSLLVVR 285 (286)
T ss_dssp SSCEEEESSCCHHHHHHHHHHT--CSEEECTH-HHH--SCCCCCEEEEEEE
T ss_pred CCeEEEEcCCCHHHHHHHHHcC--CCEEEEcH-HHc--CCCceeeEEEEec
Confidence 5799999999999999999988 78999977 444 3789999999864
No 22
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=85.82 E-value=1.1 Score=37.45 Aligned_cols=37 Identities=16% Similarity=0.273 Sum_probs=32.2
Q ss_pred CCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 56 ~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+++.|+++||++.+.+.++.+.| .|++.||+.++.+.
T Consensus 158 ~~~~i~~~gGI~~~~~~~~~~~G--ad~vvvGsai~~~~ 194 (211)
T 3f4w_A 158 RKARIAVAGGISSQTVKDYALLG--PDVVIVGSAITHAA 194 (211)
T ss_dssp SSCEEEEESSCCTTTHHHHHTTC--CSEEEECHHHHTCS
T ss_pred CCCcEEEECCCCHHHHHHHHHcC--CCEEEECHHHcCCC
Confidence 46799999999999999999887 68999999998754
No 23
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=80.50 E-value=7.6 Score=36.10 Aligned_cols=40 Identities=15% Similarity=0.193 Sum_probs=34.7
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~ 98 (268)
++.|+++||+ +...|...+..| .|+.+|||.|+.+...|.
T Consensus 207 ~iPVIA~GGI~~~~di~kala~G--Ad~V~vGs~~~~t~Esp~ 247 (361)
T 3khj_A 207 GIPIIADGGIRYSGDIGKALAVG--ASSVMIGSILAGTEESPG 247 (361)
T ss_dssp TCCEEEESCCCSHHHHHHHHHHT--CSEEEESTTTTTBTTSSC
T ss_pred CCeEEEECCCCCHHHHHHHHHcC--CCEEEEChhhhcCCcCCc
Confidence 3689999999 899999999888 578999999999877764
No 24
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=80.47 E-value=8.3 Score=31.56 Aligned_cols=66 Identities=17% Similarity=0.239 Sum_probs=46.8
Q ss_pred hcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcc
Q 024420 17 DLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYL 90 (268)
Q Consensus 17 ~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~L 90 (268)
+.+..+.|+=.-++.-....+++.+.|++. |.++++|++.|-+-......+.+.|+. ..|+.||++
T Consensus 67 ~~~~diV~lS~~~~~~~~~~~~~i~~L~~~-------g~~~i~v~vGG~~~~~~~~~l~~~G~d-~v~~~~~~~ 132 (161)
T 2yxb_A 67 QEDVDVIGVSILNGAHLHLMKRLMAKLREL-------GADDIPVVLGGTIPIPDLEPLRSLGIR-EIFLPGTSL 132 (161)
T ss_dssp HTTCSEEEEEESSSCHHHHHHHHHHHHHHT-------TCTTSCEEEEECCCHHHHHHHHHTTCC-EEECTTCCH
T ss_pred hcCCCEEEEEeechhhHHHHHHHHHHHHhc-------CCCCCEEEEeCCCchhcHHHHHHCCCc-EEECCCCCH
Confidence 345556666555555556666777777775 777799999999888888777777752 248999875
No 25
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=79.80 E-value=9.6 Score=35.64 Aligned_cols=43 Identities=7% Similarity=0.085 Sum_probs=36.3
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
++.|+++||+ +...|...+..|+ |+.+|||.|..+...|.=.+
T Consensus 211 ~iPVIA~GGI~~~~di~kala~GA--d~V~vGs~f~~t~Esp~~~~ 254 (366)
T 4fo4_A 211 GIPVIADGGIRFSGDISKAIAAGA--SCVMVGSMFAGTEEAPGEVI 254 (366)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTTC--SEEEESTTTTTBTTSSSCCE
T ss_pred CCeEEEeCCCCCHHHHHHHHHcCC--CEEEEChHhhcCCCCCchhh
Confidence 4689999999 8999999999885 89999999999877765443
No 26
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=79.72 E-value=4.9 Score=33.63 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=30.6
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
++.|+++||+ +.+.+.++.+.| .|++.||+.|..
T Consensus 175 ~ipvia~GGI~~~~~~~~~~~~G--ad~v~vG~al~~ 209 (223)
T 1y0e_A 175 DAKVIAEGNVITPDMYKRVMDLG--VHCSVVGGAITR 209 (223)
T ss_dssp CSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCCEEEecCCCCHHHHHHHHHcC--CCEEEEChHHcC
Confidence 4689999999 999999999988 789999999764
No 27
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=79.45 E-value=4.5 Score=37.15 Aligned_cols=76 Identities=18% Similarity=0.148 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHhhcCCCccEEe---eCC------C--ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHH
Q 024420 5 VPNFCAVALALNDLGYKAVGIR---LDS------G--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLD 72 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVR---lDS------G--Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~I~ 72 (268)
+..+++++++|.+.|..+.-|- .+. + --..+++++|+.+ ++.|+++|++ +.+.++
T Consensus 238 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~Ggi~t~e~a~ 304 (349)
T 3hgj_A 238 LEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-------------GLRTGAVGLITTPEQAE 304 (349)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-------------CCEEEECSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-------------CceEEEECCCCCHHHHH
Confidence 4578888888888886655442 111 1 1122333333321 3579999998 699999
Q ss_pred HHhhcCCcccEEeecCcccccC
Q 024420 73 ALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 73 ~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++++.|. .|..++|+.++..+
T Consensus 305 ~~l~~G~-aD~V~iGR~~lanP 325 (349)
T 3hgj_A 305 TLLQAGS-ADLVLLGRVLLRDP 325 (349)
T ss_dssp HHHHTTS-CSEEEESTHHHHCT
T ss_pred HHHHCCC-ceEEEecHHHHhCc
Confidence 9998774 78999999998743
No 28
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=78.81 E-value=3.8 Score=37.94 Aligned_cols=76 Identities=13% Similarity=0.177 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHhhcCCCccEEee-----C----CC--ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHH
Q 024420 5 VPNFCAVALALNDLGYKAVGIRL-----D----SG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLD 72 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRl-----D----SG--Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~I~ 72 (268)
+..+++++++|.+.|..+.-|-. + +| .-..+++++|+.+ ++.|++.|++ +.+.++
T Consensus 245 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~GgI~s~e~a~ 311 (363)
T 3l5l_A 245 LEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA-------------KLPVTSAWGFGTPQLAE 311 (363)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-------------TCCEEECSSTTSHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc-------------CCcEEEeCCCCCHHHHH
Confidence 56788899999888876544421 1 12 1233444444433 2479999998 699999
Q ss_pred HHhhcCCcccEEeecCcccccC
Q 024420 73 ALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 73 ~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++++.|. .|..++|+.++..+
T Consensus 312 ~~l~~G~-aD~V~iGR~~lanP 332 (363)
T 3l5l_A 312 AALQANQ-LDLVSVGRAHLADP 332 (363)
T ss_dssp HHHHTTS-CSEEECCHHHHHCT
T ss_pred HHHHCCC-ccEEEecHHHHhCc
Confidence 9998774 78999999998743
No 29
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=77.30 E-value=2 Score=37.59 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=31.4
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++.|.+.||+|++.+..+.+.| .|.|=+|+.+..+.
T Consensus 173 ~~~I~VdGGI~~~ti~~~~~aG--Ad~~V~GsaIf~~~ 208 (227)
T 1tqx_A 173 NLNIQVDGGLNIETTEISASHG--ANIIVAGTSIFNAE 208 (227)
T ss_dssp TCEEEEESSCCHHHHHHHHHHT--CCEEEESHHHHTCS
T ss_pred CCeEEEECCCCHHHHHHHHHcC--CCEEEEeHHHhCCC
Confidence 6789999999999999999988 57888999988643
No 30
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=76.55 E-value=2.9 Score=41.66 Aligned_cols=94 Identities=19% Similarity=0.256 Sum_probs=68.3
Q ss_pred HHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEe
Q 024420 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFG 85 (268)
Q Consensus 6 ~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fG 85 (268)
+...+-+.+|-+.|..+.-|..--|.-......++ .+.+. ++++.|++.|--+.+..+.|.+.|+...--|
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~-~ik~~--------~p~~~viaGNVaT~e~a~~Li~aGAD~vkVG 350 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIK-WIKQT--------YPKIDVIAGNVVTREQAAQLIAAGADGLRIG 350 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHH-HHHHH--------CTTSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred ccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHH-HHHhh--------CCcceEEeccccCHHHHHHHHHcCCCEEeec
Confidence 35566777888889876555554577444433333 33332 5789999999999999999999998776667
Q ss_pred ec------CcccccCCCCccceEEEEeEE
Q 024420 86 IG------TYLVTCYAQAALGCVFKLVEI 108 (268)
Q Consensus 86 VG------T~Lvt~~~~p~l~~vyKLve~ 108 (268)
|| |+.++..+.|-+..+|.+.++
T Consensus 351 iGpGSiCtTr~v~GvG~PQ~tAi~~~a~~ 379 (556)
T 4af0_A 351 MGSGSICITQEVMAVGRPQGTAVYAVAEF 379 (556)
T ss_dssp SSCSTTBCCTTTCCSCCCHHHHHHHHHHH
T ss_pred CCCCcccccccccCCCCcHHHHHHHHHHH
Confidence 76 456667788999999888765
No 31
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=75.60 E-value=1.6 Score=36.50 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.6
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCccccc
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
++.|+++||++.+.+.++.+.| .+++.|||.+..+
T Consensus 148 ~ipvia~GGI~~~~i~~~~~~G--a~gv~vGsai~~~ 182 (212)
T 2v82_A 148 DIAVFAVGGVTPENLAQWIDAG--CAGAGLGSDLYRA 182 (212)
T ss_dssp TCEEEEESSCCTTTHHHHHHHT--CSEEEECTTTCCT
T ss_pred CCeEEEeCCCCHHHHHHHHHcC--CCEEEEChHHhCC
Confidence 5899999999999999999877 6899999999874
No 32
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=75.32 E-value=3.7 Score=35.88 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeec-Cccccc
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIG-TYLVTC 93 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVG-T~Lvt~ 93 (268)
.-.+++|+++++. |+ ++.|.+-||+|++.+..+.+.| .|.|-+| +.+..+
T Consensus 152 ~kI~~lr~~~~~~-------~~-~~~I~VdGGI~~~~~~~~~~aG--Ad~~V~G~saif~~ 202 (231)
T 3ctl_A 152 DKLAELKAWRERE-------GL-EYEIEVDGSCNQATYEKLMAAG--ADVFIVGTSGLFNH 202 (231)
T ss_dssp HHHHHHHHHHHHH-------TC-CCEEEEESCCSTTTHHHHHHHT--CCEEEECTTTTGGG
T ss_pred HHHHHHHHHHhcc-------CC-CceEEEECCcCHHHHHHHHHcC--CCEEEEccHHHhCC
Confidence 3346678887764 44 3589999999999999999988 6889999 888764
No 33
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=75.19 E-value=7.6 Score=35.36 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHhhcCCCccEEee--------CCCC--hHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHHH
Q 024420 5 VPNFCAVALALNDLGYKAVGIRL--------DSGD--LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDA 73 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRl--------DSGD--l~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~I~~ 73 (268)
...++++|++|.+.|..+.-|=- .++. -..+++++|+.+ ++.|+++|++ +.+.+.+
T Consensus 228 ~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~Ggi~s~~~a~~ 294 (338)
T 1z41_A 228 IADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA-------------DMATGAVGMITDGSMAEE 294 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-------------CCEEEECSSCCSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC-------------CCCEEEECCCCCHHHHHH
Confidence 56789999999999877554411 1121 123333444322 3589999999 8999999
Q ss_pred HhhcCCcccEEeecCccccc
Q 024420 74 LNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 74 l~~~g~~id~fGVGT~Lvt~ 93 (268)
+++.|. .|..++|+.++..
T Consensus 295 ~l~~G~-aD~V~iGR~~i~n 313 (338)
T 1z41_A 295 ILQNGR-ADLIFIGRELLRD 313 (338)
T ss_dssp HHHTTS-CSEEEECHHHHHC
T ss_pred HHHcCC-ceEEeecHHHHhC
Confidence 998774 7899999999874
No 34
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=74.12 E-value=3.8 Score=36.05 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=31.0
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCccccc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
++.|+++||+ +.+.+.++.+.| .|..+|||.+..+
T Consensus 241 ~ipvia~GGI~~~~d~~~~l~~G--Ad~V~vg~~~l~~ 276 (311)
T 1ep3_A 241 DIPIIGMGGVANAQDVLEMYMAG--ASAVAVGTANFAD 276 (311)
T ss_dssp SSCEEECSSCCSHHHHHHHHHHT--CSEEEECTHHHHC
T ss_pred CCCEEEECCcCCHHHHHHHHHcC--CCEEEECHHHHcC
Confidence 5789999999 799999998888 7899999999874
No 35
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=73.38 E-value=8.2 Score=35.96 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=29.7
Q ss_pred eEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 58 vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+.|+++|+++.+.++++++.|. .|..++|..++..+
T Consensus 288 iPvi~~Ggit~e~a~~~l~~G~-aD~V~iGR~~ladP 323 (361)
T 3gka_A 288 GPFIVNENFTLDSAQAALDAGQ-ADAVAWGKLFIANP 323 (361)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCEEEeCCCCHHHHHHHHHcCC-ccEEEECHHhHhCc
Confidence 4688899999999999988764 68899999988743
No 36
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=72.36 E-value=5.3 Score=36.68 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHhhcCCCccEEe---eC-----CCC--hHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHHH
Q 024420 5 VPNFCAVALALNDLGYKAVGIR---LD-----SGD--LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDA 73 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVR---lD-----SGD--l~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~I~~ 73 (268)
+..++++|++|.+.|..+.-|- .+ ++. -..+++++++.+ ++.|+++|++ +.+.+++
T Consensus 228 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-------------~iPVi~~GgI~s~e~a~~ 294 (340)
T 3gr7_A 228 AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-------------DIPTGAVGLITSGWQAEE 294 (340)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-------------TCCEEEESSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-------------CCcEEeeCCCCCHHHHHH
Confidence 5678999999999987754442 11 121 123333333322 3579999998 6899999
Q ss_pred HhhcCCcccEEeecCcccccC
Q 024420 74 LNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 74 l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+++.|. .|..++|+.++..+
T Consensus 295 ~L~~G~-aD~V~iGR~~lanP 314 (340)
T 3gr7_A 295 ILQNGR-ADLVFLGRELLRNP 314 (340)
T ss_dssp HHHTTS-CSEEEECHHHHHCT
T ss_pred HHHCCC-eeEEEecHHHHhCc
Confidence 998773 78999999998743
No 37
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=72.06 E-value=4.4 Score=34.58 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=31.7
Q ss_pred CCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 55 FEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 55 ~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
++++.+++.||++.+.+.++.+.| .++++|||.+..
T Consensus 149 ~~~ipvvaiGGI~~~n~~~~l~aG--a~~vavgSai~~ 184 (207)
T 2yw3_A 149 FPEVRFLPTGGIKEEHLPHYAALP--NLLAVGGSWLLQ 184 (207)
T ss_dssp CTTCEEEEBSSCCGGGHHHHHTCS--SBSCEEESGGGS
T ss_pred CCCCcEEEeCCCCHHHHHHHHhCC--CcEEEEehhhhC
Confidence 457899999999999999999877 578889999876
No 38
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=71.60 E-value=9.6 Score=35.52 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=29.6
Q ss_pred eEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 58 vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+.|++.|+++.+.++++++.|. .|..++|..++..+
T Consensus 280 iPvi~~Ggit~e~a~~~l~~g~-aD~V~iGR~~lanP 315 (362)
T 4ab4_A 280 GPYIVNERFDKASANAALASGK-ADAVAFGVPFIANP 315 (362)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCEEEeCCCCHHHHHHHHHcCC-ccEEEECHHhHhCc
Confidence 4688899999999999988764 68889999988743
No 39
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=71.23 E-value=15 Score=34.07 Aligned_cols=41 Identities=15% Similarity=0.219 Sum_probs=34.4
Q ss_pred CCeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCcccccCCCCc
Q 024420 56 EKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (268)
Q Consensus 56 ~~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~ 98 (268)
.++.|+++||+. ...+.+++..| .|+.+|||.+..+...|.
T Consensus 255 ~~ipVia~GGI~~~~d~~~ala~G--Ad~V~iG~~~l~~~e~~~ 296 (404)
T 1eep_A 255 TNICIIADGGIRFSGDVVKAIAAG--ADSVMIGNLFAGTKESPS 296 (404)
T ss_dssp SSCEEEEESCCCSHHHHHHHHHHT--CSEEEECHHHHTBTTSSS
T ss_pred cCceEEEECCCCCHHHHHHHHHcC--CCHHhhCHHHhcCCCCCc
Confidence 367999999995 88888888888 789999999988766654
No 40
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=70.37 E-value=1.4 Score=36.57 Aligned_cols=36 Identities=28% Similarity=0.443 Sum_probs=32.1
Q ss_pred CCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 55 FEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 55 ~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
++++.|+++||++.+.+.++.+.| .|+++|||.+..
T Consensus 148 ~~~~pvia~GGI~~~~~~~~~~~G--a~~v~vGs~i~~ 183 (205)
T 1wa3_A 148 FPNVKFVPTGGVNLDNVCEWFKAG--VLAVGVGSALVK 183 (205)
T ss_dssp CTTCEEEEBSSCCTTTHHHHHHHT--CSCEEECHHHHC
T ss_pred CCCCcEEEcCCCCHHHHHHHHHCC--CCEEEECccccC
Confidence 447899999999999999999888 688999999876
No 41
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=69.47 E-value=16 Score=34.71 Aligned_cols=44 Identities=14% Similarity=0.094 Sum_probs=36.4
Q ss_pred CCeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 56 ~~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
.++.||++||+ +...|...+..| .++..|||.|+.+...|.-.+
T Consensus 245 ~~IPVIA~GGI~~~~di~kalalG--Ad~V~vGt~f~~t~Es~~~~~ 289 (400)
T 3ffs_A 245 FGIPIIADGGIRYSGDIGKALAVG--ASSVMIGSILAGTEESPGEKE 289 (400)
T ss_dssp TTCCEEEESCCCSHHHHHHHHTTT--CSEEEECGGGTTBTTSSCCEE
T ss_pred cCCCEEecCCCCCHHHHHHHHHcC--CCEEEEChHHhcCCCCCchhh
Confidence 35789999999 699999999888 478899999999887775433
No 42
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=69.27 E-value=7.7 Score=36.22 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=29.9
Q ss_pred eEEEEeCCCCHHHHHHHhhcCCcccEEeecCccccc
Q 024420 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 58 vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
+.|+++|+++.+.+.++++.|. .|..++|..++..
T Consensus 300 iPvi~~Ggi~~~~a~~~l~~g~-aD~V~igR~~l~~ 334 (377)
T 2r14_A 300 GGLIYCGNYDAGRAQARLDDNT-ADAVAFGRPFIAN 334 (377)
T ss_dssp SEEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHC
T ss_pred CCEEEECCCCHHHHHHHHHCCC-ceEEeecHHHHhC
Confidence 4799999999999999998764 7889999998874
No 43
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=69.18 E-value=11 Score=34.99 Aligned_cols=75 Identities=17% Similarity=0.189 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHhhcCCCccEEee---CCC--ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCC
Q 024420 5 VPNFCAVALALNDLGYKAVGIRL---DSG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGH 79 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRl---DSG--Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~ 79 (268)
+..+++++++|.+.|.....|=. +.+ -...+++++|+ + -++.|+++|+++.+.+.++++.|.
T Consensus 249 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~----~---------~~iPvi~~Ggi~~~~a~~~l~~g~ 315 (365)
T 2gou_A 249 ILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALRE----A---------YQGVLIYAGRYNAEKAEQAINDGL 315 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHH----H---------CCSEEEEESSCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHH----H---------CCCcEEEeCCCCHHHHHHHHHCCC
Confidence 35677888888877765443311 111 11222222322 2 135799999999999999998764
Q ss_pred cccEEeecCccccc
Q 024420 80 EVDAFGIGTYLVTC 93 (268)
Q Consensus 80 ~id~fGVGT~Lvt~ 93 (268)
.|..+||+.++..
T Consensus 316 -aD~V~igR~~i~~ 328 (365)
T 2gou_A 316 -ADMIGFGRPFIAN 328 (365)
T ss_dssp -CSEEECCHHHHHC
T ss_pred -cceehhcHHHHhC
Confidence 6899999998874
No 44
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=67.57 E-value=12 Score=34.51 Aligned_cols=75 Identities=13% Similarity=0.085 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHhhcCCCccEEee---CC--CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCC
Q 024420 5 VPNFCAVALALNDLGYKAVGIRL---DS--GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGH 79 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRl---DS--GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~ 79 (268)
+..++++|++|.+.|..+..|=. .+ +....+++++| +. -++.|+++|+++.+.+.++++.|.
T Consensus 250 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~----~~---------~~iPvi~~Ggit~~~a~~~l~~g~ 316 (364)
T 1vyr_A 250 EADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVR----ER---------FHGVIIGAGAYTAEKAEDLIGKGL 316 (364)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHH----HH---------CCSEEEEESSCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHH----HH---------CCCCEEEECCcCHHHHHHHHHCCC
Confidence 34577777777777765544311 00 11112222222 22 235799999999999999998764
Q ss_pred cccEEeecCccccc
Q 024420 80 EVDAFGIGTYLVTC 93 (268)
Q Consensus 80 ~id~fGVGT~Lvt~ 93 (268)
.|..++|..++..
T Consensus 317 -aD~V~~gR~~l~~ 329 (364)
T 1vyr_A 317 -IDAVAFGRDYIAN 329 (364)
T ss_dssp -CSEEEESHHHHHC
T ss_pred -ccEEEECHHHHhC
Confidence 7889999988774
No 45
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=66.72 E-value=7.5 Score=32.84 Aligned_cols=50 Identities=12% Similarity=0.097 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCC
Q 024420 36 SCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYA 95 (268)
Q Consensus 36 s~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~ 95 (268)
.+++|+.+.+. + .++.|++.||++++.+.++.+.| .|++.||+.++.+.+
T Consensus 166 i~~l~~~~~~~-------~-~~~pi~v~GGI~~~n~~~~~~aG--ad~vvvgSaI~~a~d 215 (230)
T 1rpx_A 166 ISDLRKICAER-------G-LNPWIEVDGGVGPKNAYKVIEAG--ANALVAGSAVFGAPD 215 (230)
T ss_dssp HHHHHHHHHHH-------T-CCCEEEEESSCCTTTHHHHHHHT--CCEEEESHHHHTSSC
T ss_pred HHHHHHHHHhc-------C-CCceEEEECCCCHHHHHHHHHcC--CCEEEEChhhhCCCC
Confidence 35566666543 2 24689999999999999988877 589999999987543
No 46
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=66.70 E-value=19 Score=34.24 Aligned_cols=40 Identities=10% Similarity=0.175 Sum_probs=35.3
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~ 98 (268)
++.|+++||+ +...+...+..| .|+.++|+.+..+...|.
T Consensus 340 ~ipvia~GGI~~~~di~kala~G--Ad~V~iGr~~l~~~e~~~ 380 (494)
T 1vrd_A 340 DVPIIADGGIRYSGDIVKALAAG--AESVMVGSIFAGTEEAPG 380 (494)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTBTTSSS
T ss_pred CCCEEEECCcCCHHHHHHHHHcC--CCEEEECHHHhcCCcCCc
Confidence 5789999999 899999999988 689999999998777665
No 47
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=66.38 E-value=3.5 Score=34.96 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=30.3
Q ss_pred CeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCcccc
Q 024420 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 57 ~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
++.|+++||++ .+.+.++.+.| .|++.||+.|..
T Consensus 186 ~ipvia~GGI~s~~~~~~~~~~G--ad~v~vGsal~~ 220 (234)
T 1yxy_A 186 GIAVIAEGKIHSPEEAKKINDLG--VAGIVVGGAITR 220 (234)
T ss_dssp TCCEEEESCCCSHHHHHHHHTTC--CSEEEECHHHHC
T ss_pred CCCEEEECCCCCHHHHHHHHHCC--CCEEEEchHHhC
Confidence 46899999998 99999999988 789999998864
No 48
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=64.81 E-value=28 Score=33.34 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=33.7
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCccceEEE
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFK 104 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~vyK 104 (268)
++.|+++||+ +...+...+..| .|+.+||+.+..+...|. ...||
T Consensus 358 ~ipVia~GGI~~~~di~kala~G--Ad~V~iG~~~l~~~e~~~-~~~~~ 403 (514)
T 1jcn_A 358 GVPIIADGGIQTVGHVVKALALG--ASTVMMGSLLAATTEAPG-EYFFS 403 (514)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTSTTSSC-C----
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCeeeECHHHHcCCcCCc-ceEeE
Confidence 4689999999 578899888888 789999999988765543 34444
No 49
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=64.65 E-value=12 Score=32.99 Aligned_cols=66 Identities=24% Similarity=0.201 Sum_probs=44.7
Q ss_pred cCCCccEEee----CCC-ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCccc
Q 024420 18 LGYKAVGIRL----DSG-DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 18 ~G~~l~GVRl----DSG-Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
.|.++.||-. |.+ |+ ...+++++.+... + .++.++++||++ .+.+..+.+ | .++|-||+.|+
T Consensus 173 ~gad~IGvn~~~l~~~~~dl-~~~~~L~~~i~~~-------~-~~~~vIAegGI~s~~dv~~l~~-G--a~gvlVGsAl~ 240 (254)
T 1vc4_A 173 AGAEVLGINNRDLATLHINL-ETAPRLGRLARKR-------G-FGGVLVAESGYSRKEELKALEG-L--FDAVLIGTSLM 240 (254)
T ss_dssp HTCSEEEEESBCTTTCCBCT-THHHHHHHHHHHT-------T-CCSEEEEESCCCSHHHHHTTTT-T--CSEEEECHHHH
T ss_pred cCCCEEEEccccCcCCCCCH-HHHHHHHHhCccc-------c-CCCeEEEEcCCCCHHHHHHHHc-C--CCEEEEeHHHc
Confidence 4667778744 222 33 2334444444321 1 256899999998 999999998 7 78999999998
Q ss_pred ccCC
Q 024420 92 TCYA 95 (268)
Q Consensus 92 t~~~ 95 (268)
...+
T Consensus 241 ~~~d 244 (254)
T 1vc4_A 241 RAPD 244 (254)
T ss_dssp TSSC
T ss_pred CCCC
Confidence 7543
No 50
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=63.98 E-value=15 Score=33.80 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHhhcCCCccEEe----------eCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHHH
Q 024420 5 VPNFCAVALALNDLGYKAVGIR----------LDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDA 73 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVR----------lDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~I~~ 73 (268)
+..++.++++|.+. ..+.-|- ...|--..+++++|+.+ ++.|+++|++ +.+.+++
T Consensus 229 ~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~-------------~iPVi~~Ggi~t~e~Ae~ 294 (343)
T 3kru_A 229 IDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC-------------NIKTSAVGLITTQELAEE 294 (343)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-------------TCEEEEESSCCCHHHHHH
T ss_pred HHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc-------------CcccceeeeeeHHHHHHH
Confidence 67889999999876 5543331 01121233444444432 2589999998 5889999
Q ss_pred HhhcCCcccEEeecCcccccC
Q 024420 74 LNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 74 l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+++.|. .|..++|..++..+
T Consensus 295 ~l~~G~-aD~V~iGR~~lanP 314 (343)
T 3kru_A 295 ILSNER-ADLVALGRELLRNP 314 (343)
T ss_dssp HHHTTS-CSEEEESHHHHHCT
T ss_pred HHhchh-hHHHHHHHHHhcCC
Confidence 988764 78999999998754
No 51
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=63.83 E-value=29 Score=33.33 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=34.7
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~ 98 (268)
++.||++||+ +...|...++.|+ ++-.|||.|..+...|.
T Consensus 332 ~iPVIa~GGI~~~~di~kal~~GA--d~V~vGs~~~~~~Esp~ 372 (490)
T 4avf_A 332 GVPLIADGGIRFSGDLAKAMVAGA--YCVMMGSMFAGTEEAPG 372 (490)
T ss_dssp TCCEEEESCCCSHHHHHHHHHHTC--SEEEECTTTTTBTTSSS
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCC--CeeeecHHHhcCCCCCC
Confidence 4789999999 8999999998885 78999999998776664
No 52
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=63.64 E-value=5.5 Score=35.68 Aligned_cols=36 Identities=28% Similarity=0.228 Sum_probs=32.2
Q ss_pred CeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++.++++||++ .+.+..+.+.| .++|.||+.|+.+.
T Consensus 213 ~~pvVaegGI~t~edv~~l~~~G--adgvlVGsal~~a~ 249 (272)
T 3qja_A 213 SVIRIAESGVRGTADLLAYAGAG--ADAVLVGEGLVTSG 249 (272)
T ss_dssp TSEEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHTCS
T ss_pred cCEEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHhCCC
Confidence 57899999998 99999999887 78999999998754
No 53
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=62.79 E-value=12 Score=32.50 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=29.8
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
++.++++||+ +.+.+.++.+.| .|++.|||.|+.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~G--adgV~VGsal~~ 215 (232)
T 3igs_A 181 GCRVIAEGRYNSPALAAEAIRYG--AWAVTVGSAITR 215 (232)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCcEEEECCCCCHHHHHHHHHcC--CCEEEEehHhcC
Confidence 5689999999 599999999888 689999999874
No 54
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=62.69 E-value=9.7 Score=33.03 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=30.0
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
++.++++||+ +.+.+.++.+.| .|++-|||.|+.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~G--adgV~VGsai~~ 215 (229)
T 3q58_A 181 GCRVIAEGRYNTPALAANAIEHG--AWAVTVGSAITR 215 (229)
T ss_dssp TCCEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEEchHhcC
Confidence 5689999999 599999999888 689999999875
No 55
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=62.32 E-value=11 Score=31.49 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=29.8
Q ss_pred CeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCccccc
Q 024420 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 57 ~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
++.|+++||++ .+.+.++.+.| .|++.||+.|...
T Consensus 198 ~~pvia~GGi~~~~~~~~~~~~G--a~~v~vgsal~~~ 233 (253)
T 1h5y_A 198 RIPVIASGGAGRVEHFYEAAAAG--ADAVLAASLFHFR 233 (253)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTT
T ss_pred CCCEEEeCCCCCHHHHHHHHHcC--CcHHHHHHHHHcC
Confidence 56899999998 58999988766 6899999999864
No 56
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=61.30 E-value=3.5 Score=34.71 Aligned_cols=36 Identities=11% Similarity=0.298 Sum_probs=31.6
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++.|++.||++.+.+.++.+.| .+++.||+.+..+.
T Consensus 164 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~~ 199 (221)
T 1yad_A 164 SIPVIAIGGMTPDRLRDVKQAG--ADGIAVMSGIFSSA 199 (221)
T ss_dssp CSCEEEESSCCGGGHHHHHHTT--CSEEEESHHHHTSS
T ss_pred CCCEEEECCCCHHHHHHHHHcC--CCEEEEhHHhhCCC
Confidence 5689999999999999999876 68999999998753
No 57
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=61.08 E-value=9.9 Score=33.39 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhh--cCCcccEEeecCccccc
Q 024420 37 CEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK--QGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 37 ~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~--~g~~id~fGVGT~Lvt~ 93 (268)
+++|+++++. |+ ++.|.+-||+|++.+..+.+ .| .|.|=+|+.+..+
T Consensus 175 ~~lr~~~~~~-------~~-~~~I~vdGGI~~~~~~~~~~~~aG--ad~~VvGSaIf~~ 223 (237)
T 3cu2_A 175 IQVEKRLGNR-------RV-EKLINIDGSMTLELAKYFKQGTHQ--IDWLVSGSALFSG 223 (237)
T ss_dssp HHHHHHHGGG-------GG-GCEEEEESSCCHHHHHHHHHSSSC--CCCEEECGGGGSS
T ss_pred HHHHHHHHhc-------CC-CceEEEECCcCHHHHHHHHHhCCC--CcEEEEeeHHhCC
Confidence 4566666543 33 35899999999999999998 77 6788899999864
No 58
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=60.76 E-value=7.5 Score=34.48 Aligned_cols=50 Identities=18% Similarity=0.272 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 35 LSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 35 ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
-.+++|+++++. |+ ++.|.+.||++++.+.++.+.| .|.|=+|+.+..+.
T Consensus 181 KI~~lr~~~~~~-------~~-~~~I~VDGGI~~~ti~~~~~aG--AD~~V~GSaIf~a~ 230 (246)
T 3inp_A 181 KAKEISKWISST-------DR-DILLEIDGGVNPYNIAEIAVCG--VNAFVAGSAIFNSD 230 (246)
T ss_dssp HHHHHHHHHHHH-------TS-CCEEEEESSCCTTTHHHHHTTT--CCEEEESHHHHTSS
T ss_pred HHHHHHHHHHhc-------CC-CeeEEEECCcCHHHHHHHHHcC--CCEEEEehHHhCCC
Confidence 345677777764 43 3689999999999999999988 46677888887643
No 59
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=60.15 E-value=22 Score=32.55 Aligned_cols=74 Identities=14% Similarity=0.082 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhhcCCCccEEeeC------CCC--------hHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHH
Q 024420 6 PNFCAVALALNDLGYKAVGIRLD------SGD--------LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEET 70 (268)
Q Consensus 6 ~nai~Va~~L~~~G~~l~GVRlD------SGD--------l~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~ 70 (268)
.+++++|+.+.+.|....-|--- ||. -..+.. .+.+. ++++.|+++||+ +.+.
T Consensus 144 ~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~----~ik~~--------~~~iPVianGgI~s~ed 211 (350)
T 3b0p_A 144 RGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVH----RLKGD--------FPQLTFVTNGGIRSLEE 211 (350)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHH----HHHHH--------CTTSEEEEESSCCSHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHH----HHHHh--------CCCCeEEEECCcCCHHH
Confidence 46788888888888665443110 111 011222 22222 236799999998 8899
Q ss_pred HHHHhhcCCcccEEeecCcccccC
Q 024420 71 LDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 71 I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+.++++ | .|+..||+.+...+
T Consensus 212 a~~~l~-G--aD~V~iGRa~l~~P 232 (350)
T 3b0p_A 212 ALFHLK-R--VDGVMLGRAVYEDP 232 (350)
T ss_dssp HHHHHT-T--SSEEEECHHHHHCG
T ss_pred HHHHHh-C--CCEEEECHHHHhCc
Confidence 999987 6 89999999998743
No 60
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=60.07 E-value=22 Score=33.11 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=26.1
Q ss_pred eEEEEeCCCCHHHHHHHhhcCCcccEEeecCccccc
Q 024420 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 58 vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
+.|++.|+++.+.+.++++.|. .|..++|..++..
T Consensus 308 iPvi~~G~it~~~a~~~l~~g~-aD~V~igR~~l~~ 342 (379)
T 3aty_A 308 GVKISNLRYDFEEADQQIREGK-VDAVAFGAKFIAN 342 (379)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHC
T ss_pred CcEEEECCCCHHHHHHHHHcCC-CeEEEecHHHHhC
Confidence 4678888888888888877653 6777888877763
No 61
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=59.26 E-value=8 Score=33.34 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
...+++|++.++. |+ ++.|.+-||++++.+.++.+.| .|++=||+.+..+.
T Consensus 158 ~~i~~lr~~~~~~-------~~-~~~I~v~GGI~~~~~~~~~~aG--ad~vvvGSai~~a~ 208 (230)
T 1tqj_A 158 PKIRALRQMCDER-------GL-DPWIEVDGGLKPNNTWQVLEAG--ANAIVAGSAVFNAP 208 (230)
T ss_dssp HHHHHHHHHHHHH-------TC-CCEEEEESSCCTTTTHHHHHHT--CCEEEESHHHHTSS
T ss_pred HHHHHHHHHHHhc-------CC-CCcEEEECCcCHHHHHHHHHcC--CCEEEECHHHHCCC
Confidence 4456677777764 43 4699999999999999999887 58899999998753
No 62
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=58.07 E-value=11 Score=33.17 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=30.5
Q ss_pred CCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 54 G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.|+++++++.||++++.+.++++.|+. +-++||.|+.
T Consensus 171 p~p~ip~~ptGGI~~~n~~~~l~aGa~--~~vgGs~l~~ 207 (232)
T 4e38_A 171 PYGDIRLMPTGGITPSNIDNYLAIPQV--LACGGTWMVD 207 (232)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHTSTTB--CCEEECGGGC
T ss_pred HhcCCCeeeEcCCCHHHHHHHHHCCCe--EEEECchhcC
Confidence 578999999999999999999998863 3555777764
No 63
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=57.47 E-value=19 Score=31.17 Aligned_cols=37 Identities=14% Similarity=0.302 Sum_probs=31.5
Q ss_pred CCCCeEEEEeCCCCHHHHHHHhh-cCCcccEEeecCccccc
Q 024420 54 DFEKMSITASNDLNEETLDALNK-QGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 54 G~~~vkIi~S~~Lde~~I~~l~~-~g~~id~fGVGT~Lvt~ 93 (268)
.++++.+++.||++++.+.++.+ .| ++++| |+.|+..
T Consensus 163 ~~~~ipvvaiGGI~~~N~~~~l~~~G--a~~v~-gSai~~~ 200 (225)
T 1mxs_A 163 PFGDIRFCPTGGVNPANVRNYMALPN--VMCVG-TTWMLDS 200 (225)
T ss_dssp TTTTCEEEEBSSCCTTTHHHHHHSTT--BCCEE-ECTTSCH
T ss_pred hCCCCeEEEECCCCHHHHHHHHhccC--CEEEE-EchhcCc
Confidence 46789999999999999999998 45 67888 9998763
No 64
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=57.31 E-value=4.8 Score=38.01 Aligned_cols=36 Identities=17% Similarity=0.132 Sum_probs=30.6
Q ss_pred eEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 58 vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+.|+++|+++.+.++++++.|. .|..++|..++..+
T Consensus 320 iPvi~~G~i~~~~a~~~l~~g~-aD~V~igR~~l~dP 355 (402)
T 2hsa_B 320 GTFICSGGYTRELGIEAVAQGD-ADLVSYGRLFISNP 355 (402)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCEEEeCCCCHHHHHHHHHCCC-CceeeecHHHHhCc
Confidence 4699999999999999998764 78999999998743
No 65
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=56.45 E-value=39 Score=29.04 Aligned_cols=67 Identities=15% Similarity=0.245 Sum_probs=40.0
Q ss_pred HHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC---HHH----HHHHhhcCCcccE
Q 024420 11 VALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN---EET----LDALNKQGHEVDA 83 (268)
Q Consensus 11 Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld---e~~----I~~l~~~g~~id~ 83 (268)
+++...+.|..+.++=. ++|+..+ +++... .++.++++||++ .+. +.++.+.|+ ++
T Consensus 171 ~a~~a~~~Gad~i~~~~-~~~~~~l----~~i~~~----------~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga--~g 233 (273)
T 2qjg_A 171 AARLGAELGADIVKTSY-TGDIDSF----RDVVKG----------CPAPVVVAGGPKTNTDEEFLQMIKDAMEAGA--AG 233 (273)
T ss_dssp HHHHHHHTTCSEEEECC-CSSHHHH----HHHHHH----------CSSCEEEECCSCCSSHHHHHHHHHHHHHHTC--SE
T ss_pred HHHHHHHcCCCEEEECC-CCCHHHH----HHHHHh----------CCCCEEEEeCCCCCCHHHHHHHHHHHHHcCC--cE
Confidence 33545556766656542 3454322 222222 246889999998 444 555556775 68
Q ss_pred EeecCcccccC
Q 024420 84 FGIGTYLVTCY 94 (268)
Q Consensus 84 fGVGT~Lvt~~ 94 (268)
+.||+.+..+.
T Consensus 234 v~vg~~i~~~~ 244 (273)
T 2qjg_A 234 VAVGRNIFQHD 244 (273)
T ss_dssp EECCHHHHTSS
T ss_pred EEeeHHhhCCC
Confidence 88999987753
No 66
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=56.24 E-value=8.9 Score=31.88 Aligned_cols=36 Identities=22% Similarity=0.458 Sum_probs=30.8
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+..|+++||++++.+.++.+.| .|++-||+.+..+.
T Consensus 170 ~~~i~v~GGI~~~~~~~~~~~G--ad~vvvGsai~~~~ 205 (220)
T 2fli_A 170 SFDIEVDGGVDNKTIRACYEAG--ANVFVAGSYLFKAS 205 (220)
T ss_dssp CCEEEEESSCCTTTHHHHHHHT--CCEEEESHHHHTSS
T ss_pred CceEEEECcCCHHHHHHHHHcC--CCEEEEChHHhCCC
Confidence 4689999999999999998877 57888999998753
No 67
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=55.55 E-value=4.6 Score=33.33 Aligned_cols=36 Identities=19% Similarity=0.339 Sum_probs=30.7
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++.|+++||++.+.+.++.+.| .+++.||+.+....
T Consensus 162 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~~ 197 (215)
T 1xi3_A 162 KIPVVAIGGINKDNAREVLKTG--VDGIAVISAVMGAE 197 (215)
T ss_dssp SSCEEEESSCCTTTHHHHHTTT--CSEEEESHHHHTSS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEEhHHHhCCC
Confidence 5689999999999999998765 68999999998743
No 68
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=55.41 E-value=34 Score=31.50 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=36.6
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCccceEE
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVF 103 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~vy 103 (268)
++.|+++||+ +...+...+..| .|+.+||+.+..+...|.-.+.|
T Consensus 277 ~ipvia~GGI~~~~dv~kalalG--A~~V~iG~~~l~~~es~~~~~~~ 322 (393)
T 2qr6_A 277 YVHIIADGSIENSGDVVKAIACG--ADAVVLGSPLARAEEAAGKGYFW 322 (393)
T ss_dssp CCEEEECSSCCSHHHHHHHHHHT--CSEEEECGGGGGSTTCTTTTEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHcCCCCCCceEEE
Confidence 4899999999 688888888888 58999999998877666544444
No 69
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=54.52 E-value=8.6 Score=35.27 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=33.8
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCC
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p 97 (268)
++.|+++||+ |.+.+.++.+.| .|++.|||.+..+.+.+
T Consensus 208 ~iPViaaGGI~~~~~~~~~l~~G--Ad~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 208 DIPVVAAGGIMRGGQIAAVLAAG--ADAAQLGTAFLATDESG 247 (369)
T ss_dssp SSCEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHTSTTCC
T ss_pred CceEEEECCCCCHHHHHHHHHcC--CCEEEEChHHhCCcccC
Confidence 4689999999 999999999988 68999999998866544
No 70
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=54.15 E-value=29 Score=30.55 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=29.7
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
++.|+++||+ +.+.+.++...| .|..+|||.++.
T Consensus 242 ~ipvi~~GGI~~~~da~~~l~~G--Ad~V~vg~~~l~ 276 (311)
T 1jub_A 242 EIQIIGTGGIETGQDAFEHLLCG--ATMLQIGTALHK 276 (311)
T ss_dssp TSEEEEESSCCSHHHHHHHHHHT--CSEEEECHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEEchHHHh
Confidence 6899999999 778888888878 689999999985
No 71
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=52.67 E-value=12 Score=31.76 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=30.9
Q ss_pred CeEEEEeCCCCH-HHHHHHhhcCCcccEEeecCccccc
Q 024420 57 KMSITASNDLNE-ETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 57 ~vkIi~S~~Lde-~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
++.|+++||++. +.+.++.+.| .|++.|||.+...
T Consensus 191 ~~pi~~~GGI~~~e~i~~~~~~G--ad~vivGsai~~~ 226 (248)
T 1geq_A 191 RNKVAVGFGVSKREHVVSLLKEG--ANGVVVGSALVKI 226 (248)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCCEEEEeecCCHHHHHHHHHcC--CCEEEEcHHHHhh
Confidence 468999999998 9999998877 6899999999864
No 72
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=50.50 E-value=45 Score=29.99 Aligned_cols=39 Identities=21% Similarity=0.250 Sum_probs=32.8
Q ss_pred CeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCcccccCCCC
Q 024420 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQA 97 (268)
Q Consensus 57 ~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~~~~p 97 (268)
++.|+++||++ .+.+.++...| .|+..|||.+..+...+
T Consensus 162 ~iPViaaGGI~~~~~~~~al~~G--AdgV~vGs~~l~~~e~~ 201 (332)
T 2z6i_A 162 SIPVIAAGGIADGEGAAAGFMLG--AEAVQVGTRFVVAKESN 201 (332)
T ss_dssp SSCEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHTBTTCC
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEecHHHhcCcccc
Confidence 46799999997 99999988877 58999999999876543
No 73
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=50.49 E-value=30 Score=30.54 Aligned_cols=35 Identities=14% Similarity=0.058 Sum_probs=30.0
Q ss_pred CCeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCcccc
Q 024420 56 EKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 56 ~~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
+++.|+++||+. .+.+.++...| .|..+|||.++.
T Consensus 243 ~~ipvi~~GGI~~~~da~~~l~~G--Ad~V~ig~~~l~ 278 (314)
T 2e6f_A 243 PDKLVFGCGGVYSGEDAFLHILAG--ASMVQVGTALQE 278 (314)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHHT--CSSEEECHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHcC--CCEEEEchhhHh
Confidence 468999999995 88888888888 688999999985
No 74
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=50.09 E-value=68 Score=30.96 Aligned_cols=40 Identities=8% Similarity=0.148 Sum_probs=33.3
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~ 98 (268)
++.||++||+ +...|...+..| .++-.||+.+.-+...|.
T Consensus 359 ~iPVIa~GGI~~~~di~kala~G--A~~V~vGs~~~~~~es~g 399 (511)
T 3usb_A 359 GIPVIADGGIKYSGDMVKALAAG--AHVVMLGSMFAGVAESPG 399 (511)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSSS
T ss_pred CCcEEEeCCCCCHHHHHHHHHhC--chhheecHHHhcCccCch
Confidence 3689999999 899999998888 578899999988766554
No 75
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=49.86 E-value=13 Score=32.82 Aligned_cols=32 Identities=13% Similarity=0.182 Sum_probs=28.3
Q ss_pred EEEeCCC-CHHHHHHHhhcCCcccEEeecCccccc
Q 024420 60 ITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 60 Ii~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
|+++||+ +.+.+.++.+.| .|++.|||.+..+
T Consensus 212 ~~a~GGI~~~e~i~~~~~aG--adgvvvGsai~~~ 244 (297)
T 2zbt_A 212 NFAAGGIATPADAALMMHLG--MDGVFVGSGIFKS 244 (297)
T ss_dssp EEBCSSCCSHHHHHHHHHTT--CSEEEECGGGGGS
T ss_pred EEeeCCCCCHHHHHHHHHcC--CCEEEEchHHhCC
Confidence 4599999 999999999887 6899999999864
No 76
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=49.26 E-value=24 Score=33.93 Aligned_cols=92 Identities=18% Similarity=0.239 Sum_probs=61.7
Q ss_pred HHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCC-eEEEEeCCCCHHHHHHHhhcCCcccEE
Q 024420 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEK-MSITASNDLNEETLDALNKQGHEVDAF 84 (268)
Q Consensus 6 ~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~-vkIi~S~~Lde~~I~~l~~~g~~id~f 84 (268)
.++.+.+..|.+.|.++..|-.+.|+...+...+ +.+.+. +++ +.|++.+-.+.+..+.+.+.|+....-
T Consensus 241 ~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~--------~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~V 311 (503)
T 1me8_A 241 RDFRERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREK--------YGDKVKVGAGNIVDGEGFRYLADAGADFIKI 311 (503)
T ss_dssp SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHH--------HGGGSCEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred hhHHHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHh--------CCCCceEeeccccCHHHHHHHHHhCCCeEEe
Confidence 4566777888888888877777778865544333 444442 234 788999999999999999999865444
Q ss_pred eecC------cccccCCCCccceEEEEe
Q 024420 85 GIGT------YLVTCYAQAALGCVFKLV 106 (268)
Q Consensus 85 GVGT------~Lvt~~~~p~l~~vyKLv 106 (268)
|+|. +.++..+.|.+..+..++
T Consensus 312 g~~~g~~~~~r~~~~~g~p~~~~l~~v~ 339 (503)
T 1me8_A 312 GIGGGSICITREQKGIGRGQATAVIDVV 339 (503)
T ss_dssp CSSCSTTCCSTTTTCCCCCHHHHHHHHH
T ss_pred cccCCcCcccccccCCCCchHHHHHHHH
Confidence 7733 333344567666555554
No 77
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=47.82 E-value=19 Score=35.32 Aligned_cols=76 Identities=11% Similarity=0.271 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHhhcCCCccEEee---C---------C--CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHH
Q 024420 5 VPNFCAVALALNDLGYKAVGIRL---D---------S--GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEE 69 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRl---D---------S--GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~ 69 (268)
...++++|++|.+.|..+..|-. + + +....+++++| +. -++.|++.|++ +.+
T Consensus 227 ~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~~---------~~iPvi~~Ggi~~~~ 293 (671)
T 1ps9_A 227 FAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLK----GH---------VSLPLVTTNRINDPQ 293 (671)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHT----TS---------CSSCEEECSSCCSHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHH----Hh---------cCceEEEeCCCCCHH
Confidence 46789999999998877665521 1 0 11122222222 21 24679999999 899
Q ss_pred HHHHHhhcCCcccEEeecCcccccC
Q 024420 70 TLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 70 ~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
.++++++.|. .|..++|..++..+
T Consensus 294 ~a~~~l~~g~-aD~V~~gR~~l~~P 317 (671)
T 1ps9_A 294 VADDILSRGD-ADMVSMARPFLADA 317 (671)
T ss_dssp HHHHHHHTTS-CSEEEESTHHHHCT
T ss_pred HHHHHHHcCC-CCEEEeCHHHHhCc
Confidence 9999998763 78899999887643
No 78
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=47.75 E-value=5.6 Score=33.23 Aligned_cols=35 Identities=9% Similarity=0.203 Sum_probs=30.3
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCccccc
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
++.|+++||++.+.+.++.+.| .+++.||+.+...
T Consensus 172 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~ 206 (227)
T 2tps_A 172 SIPIVGIGGITIDNAAPVIQAG--ADGVSMISAISQA 206 (227)
T ss_dssp CCCEEEESSCCTTTSHHHHHTT--CSEEEESHHHHTS
T ss_pred CCCEEEEcCCCHHHHHHHHHcC--CCEEEEhHHhhcC
Confidence 3689999999999999998766 6899999999864
No 79
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=47.15 E-value=48 Score=26.04 Aligned_cols=64 Identities=11% Similarity=0.016 Sum_probs=37.3
Q ss_pred CCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-----CHHH-HHHHhhcCCcccEEeecCccc
Q 024420 20 YKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-----NEET-LDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 20 ~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-----de~~-I~~l~~~g~~id~fGVGT~Lv 91 (268)
..+.|+=.=++.-....+++.+.|++. |+++++|++.|.. |... -..+.+.|+ -..|+.||...
T Consensus 55 ~d~v~lS~~~~~~~~~~~~~i~~l~~~-------g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~-d~~~~~g~~~~ 124 (137)
T 1ccw_A 55 ADAILVSSLYGQGEIDCKGLRQKCDEA-------GLEGILLYVGGNIVVGKQHWPDVEKRFKDMGY-DRVYAPGTPPE 124 (137)
T ss_dssp CSEEEEEECSSTHHHHHTTHHHHHHHT-------TCTTCEEEEEESCSSSSCCHHHHHHHHHHTTC-SEECCTTCCHH
T ss_pred CCEEEEEecCcCcHHHHHHHHHHHHhc-------CCCCCEEEEECCCcCchHhhhhhHHHHHHCCC-CEEECCCCCHH
Confidence 344444444444344455566777775 7777888888864 1111 334566676 44678888653
No 80
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=46.90 E-value=7.8 Score=33.02 Aligned_cols=36 Identities=17% Similarity=0.313 Sum_probs=31.5
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++.|++.||++++.+.++.+.| +|++=||+.++.+.
T Consensus 173 ~~pi~v~GGI~~~ni~~~~~aG--aD~vvvGsai~~~~ 208 (228)
T 1h1y_A 173 SLDIEVDGGLGPSTIDVAASAG--ANCIVAGSSIFGAA 208 (228)
T ss_dssp TSEEEEESSCSTTTHHHHHHHT--CCEEEESHHHHTSS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEECHHHHCCC
Confidence 6689999999999999998877 68999999998754
No 81
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=46.80 E-value=36 Score=27.07 Aligned_cols=37 Identities=16% Similarity=0.375 Sum_probs=26.5
Q ss_pred CCCCeEEEEeCCCCHHH------HHHHhhcCCcccEEeecCcc
Q 024420 54 DFEKMSITASNDLNEET------LDALNKQGHEVDAFGIGTYL 90 (268)
Q Consensus 54 G~~~vkIi~S~~Lde~~------I~~l~~~g~~id~fGVGT~L 90 (268)
+..++-|++|||.+... ++.+.+.|..+.++|||...
T Consensus 121 ~~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~~~ 163 (178)
T 2xgg_A 121 HVPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGHYV 163 (178)
T ss_dssp TSCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCCcC
Confidence 45678899999986554 45556778899999999875
No 82
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=46.54 E-value=23 Score=30.31 Aligned_cols=35 Identities=20% Similarity=0.064 Sum_probs=28.6
Q ss_pred CeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCccccc
Q 024420 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 57 ~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
++.|+++||+. .+.+.++.+.| .|++-||+.|...
T Consensus 200 ~ipvia~GGI~~~ed~~~~~~~G--adgv~vgsal~~~ 235 (266)
T 2w6r_A 200 TLPIIASGGAGKMEHFLEAFLAG--ADAALAASVFHFR 235 (266)
T ss_dssp CSCEEEESCCCSHHHHHHHHHHT--CSEEEESTTTC--
T ss_pred CCCEEEeCCCCCHHHHHHHHHcC--CHHHHccHHHHcC
Confidence 56899999999 58999988766 6899999999874
No 83
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=46.04 E-value=34 Score=29.41 Aligned_cols=38 Identities=16% Similarity=0.311 Sum_probs=28.4
Q ss_pred CCCCCeEEEEeCCCCH------HHHHHHhhcCCcccEEeecCcc
Q 024420 53 PDFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTYL 90 (268)
Q Consensus 53 ~G~~~vkIi~S~~Lde------~~I~~l~~~g~~id~fGVGT~L 90 (268)
++.+++-|++|||-+- ..++.+.+.|..+-++|||...
T Consensus 123 ~~~~~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~ 166 (266)
T 4hqo_A 123 EKAIQLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGI 166 (266)
T ss_dssp TTSEEEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSSSC
T ss_pred CCCCeEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCccc
Confidence 3456788999999853 3445566788899999999854
No 84
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=45.81 E-value=56 Score=27.48 Aligned_cols=75 Identities=15% Similarity=0.125 Sum_probs=49.2
Q ss_pred HHHHHHHHHhhcCCCccEEe-eCCC--ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHhhcCCccc
Q 024420 7 NFCAVALALNDLGYKAVGIR-LDSG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEVD 82 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVR-lDSG--Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld-e~~I~~l~~~g~~id 82 (268)
+.+++|+++.+.|....-++ ++.+ ........++++-++ .++.|+++|+++ .+.+.++.+.| .|
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~----------~~iPvi~~Ggi~~~~~~~~~~~~G--ad 99 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAER----------VFIPLTVGGGVRSLEDARKLLLSG--AD 99 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT----------CCSCEEEESSCCSHHHHHHHHHHT--CS
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHh----------CCCCEEEECCcCCHHHHHHHHHcC--CC
Confidence 57888999988888765565 1211 111222222322211 356899999997 78888888888 68
Q ss_pred EEeecCccccc
Q 024420 83 AFGIGTYLVTC 93 (268)
Q Consensus 83 ~fGVGT~Lvt~ 93 (268)
..-+|+.+...
T Consensus 100 ~V~lg~~~l~~ 110 (252)
T 1ka9_F 100 KVSVNSAAVRR 110 (252)
T ss_dssp EEEECHHHHHC
T ss_pred EEEEChHHHhC
Confidence 88999988763
No 85
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=45.37 E-value=80 Score=30.32 Aligned_cols=77 Identities=14% Similarity=0.171 Sum_probs=0.0
Q ss_pred HHHHHHHhhcCCCccEEeeCCCCh-------------HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHHHH
Q 024420 9 CAVALALNDLGYKAVGIRLDSGDL-------------AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDAL 74 (268)
Q Consensus 9 i~Va~~L~~~G~~l~GVRlDSGDl-------------~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~I~~l 74 (268)
.+.|++|.+.|.+..-|=.-.|.. ..+..++.+.+++ .++.||++||+ +...|...
T Consensus 283 ~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~----------~~iPVIa~GGI~~~~di~ka 352 (496)
T 4fxs_A 283 AEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE----------YGIPVIADGGIRFSGDISKA 352 (496)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGG----------GTCCEEEESCCCSHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhcc----------CCCeEEEeCCCCCHHHHHHH
Q ss_pred hhcCCcccEEeecCcccccCCCC
Q 024420 75 NKQGHEVDAFGIGTYLVTCYAQA 97 (268)
Q Consensus 75 ~~~g~~id~fGVGT~Lvt~~~~p 97 (268)
+..|+ |+..|||.|..+...|
T Consensus 353 la~GA--d~V~iGs~f~~t~Esp 373 (496)
T 4fxs_A 353 IAAGA--SCVMVGSMFAGTEEAP 373 (496)
T ss_dssp HHTTC--SEEEESTTTTTBTTSS
T ss_pred HHcCC--CeEEecHHHhcCCCCC
No 86
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=44.11 E-value=9.9 Score=31.33 Aligned_cols=36 Identities=14% Similarity=0.255 Sum_probs=30.7
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++.|++.||++++.+.++.+.| .|++.||+.+....
T Consensus 158 ~~pi~v~GGI~~~~~~~~~~aG--ad~vvvGsaI~~~~ 193 (207)
T 3ajx_A 158 RVPFSVAGGVKVATIPAVQKAG--AEVAVAGGAIYGAA 193 (207)
T ss_dssp TSCEEEESSCCGGGHHHHHHTT--CSEEEESHHHHTSS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEEeeeccCCC
Confidence 4579999999999999998888 47899999998754
No 87
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=43.89 E-value=15 Score=34.08 Aligned_cols=76 Identities=9% Similarity=0.058 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHhhcCCCccEE--e-eC-CCC---hHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhc
Q 024420 5 VPNFCAVALALNDLGYKAVGI--R-LD-SGD---LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GV--R-lD-SGD---l~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~ 77 (268)
+..++++|++|.+.|..+.-| | .+ ++. ...+++++| ++ + ++.|+++|+++.+.+.++++.
T Consensus 255 ~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr----~~---~------~iPvi~~G~i~~~~a~~~l~~ 321 (376)
T 1icp_A 255 TALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMR----KA---Y------KGTFIVAGGYDREDGNRALIE 321 (376)
T ss_dssp HHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHH----HH---C------CSCEEEESSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHH----HH---c------CCCEEEeCCCCHHHHHHHHHC
Confidence 446899999998888665433 1 11 111 001122222 22 1 347999999999999999987
Q ss_pred CCcccEEeecCcccccC
Q 024420 78 GHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 78 g~~id~fGVGT~Lvt~~ 94 (268)
|. .|..++|..++..+
T Consensus 322 g~-aD~V~~gR~~l~~P 337 (376)
T 1icp_A 322 DR-ADLVAYGRLFISNP 337 (376)
T ss_dssp TS-CSEEEESHHHHHCT
T ss_pred CC-CcEEeecHHHHhCc
Confidence 64 78999999998743
No 88
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=43.70 E-value=8.5 Score=32.41 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=30.7
Q ss_pred CCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCccccc
Q 024420 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 56 ~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
.++.+++.||++++.+.++.+.| .++++||+.+...
T Consensus 143 ~~iPviaiGGI~~~nv~~~~~~G--a~gVav~s~i~~~ 178 (210)
T 3ceu_A 143 IDSKVMALGGINEDNLLEIKDFG--FGGAVVLGDLWNK 178 (210)
T ss_dssp SSTTEEEESSCCTTTHHHHHHTT--CSEEEESHHHHTT
T ss_pred CCCCEEEECCCCHHHHHHHHHhC--CCEEEEhHHhHcC
Confidence 35689999999999999999876 5789999999764
No 89
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=42.49 E-value=1.2e+02 Score=26.55 Aligned_cols=63 Identities=22% Similarity=0.154 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCC
Q 024420 5 VPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGH 79 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~ 79 (268)
...++.++++|-+.|.+..=||+.|.+-....+++++.+ +++.|=+..=++.+..+...+.|+
T Consensus 45 ~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~------------~~~~iGaGTVlt~~~a~~Ai~AGA 107 (232)
T 4e38_A 45 AEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQ------------PEMLIGAGTILNGEQALAAKEAGA 107 (232)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC------------TTCEEEEECCCSHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhC------------CCCEEeECCcCCHHHHHHHHHcCC
Confidence 356889999999999998888888888544444444333 233444444455555555555554
No 90
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=42.39 E-value=45 Score=31.52 Aligned_cols=76 Identities=16% Similarity=0.159 Sum_probs=51.4
Q ss_pred hHHHHHHHHHHhh-cCCCccEEee-----------CCCC--hHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHH
Q 024420 5 VPNFCAVALALND-LGYKAVGIRL-----------DSGD--LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEE 69 (268)
Q Consensus 5 v~nai~Va~~L~~-~G~~l~GVRl-----------DSGD--l~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~ 69 (268)
+..+++++++|.+ .|..+.-|=- .+|. -..+++++|+.+. .++.|++.|++ +.+
T Consensus 263 ~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~-----------~~iPVI~~GgI~t~e 331 (419)
T 3l5a_A 263 IDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLA-----------GRIPLIASGGINSPE 331 (419)
T ss_dssp HHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHT-----------TSSCEEECSSCCSHH
T ss_pred HHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcC-----------CCCeEEEECCCCCHH
Confidence 5678999999998 8866432210 0121 1234444554431 24679999996 799
Q ss_pred HHHHHhhcCCcccEEeecCcccccC
Q 024420 70 TLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 70 ~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
.++++++. .|..++|+.++..+
T Consensus 332 ~Ae~~L~~---aDlVaiGR~~IanP 353 (419)
T 3l5a_A 332 SALDALQH---ADMVGMSSPFVTEP 353 (419)
T ss_dssp HHHHHGGG---CSEEEESTHHHHCT
T ss_pred HHHHHHHh---CCcHHHHHHHHHCc
Confidence 99999887 89999999998743
No 91
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=42.25 E-value=8.4 Score=33.89 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=31.6
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++.+++-||++.+.+.++.+.| .+++.||+.+..+.
T Consensus 191 ~iPvvAiGGI~~~ni~~~~~aG--a~gvav~sai~~a~ 226 (243)
T 3o63_A 191 DKPWFAIGGINAQRLPAVLDAG--ARRIVVVRAITSAD 226 (243)
T ss_dssp CCCEEEESSCCTTTHHHHHHTT--CCCEEESHHHHTCS
T ss_pred CCCEEEecCCCHHHHHHHHHcC--CCEEEEeHHHhCCC
Confidence 6789999999999999999988 67899999998754
No 92
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=41.63 E-value=1.6e+02 Score=27.27 Aligned_cols=39 Identities=21% Similarity=0.155 Sum_probs=33.6
Q ss_pred EEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCcc
Q 024420 59 SITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAAL 99 (268)
Q Consensus 59 kIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l 99 (268)
.|+++||+ +...|...++.|+ |+..||+.|..+...|.-
T Consensus 201 PVIAdGGI~~~~di~kALa~GA--d~V~iGr~f~~t~Espg~ 240 (361)
T 3r2g_A 201 SIVADGGIKTSGDIVKALAFGA--DFVMIGGMLAGSAPTPGE 240 (361)
T ss_dssp EEEEESCCCSHHHHHHHHHTTC--SEEEESGGGTTBTTSSSC
T ss_pred CEEEECCCCCHHHHHHHHHcCC--CEEEEChHHhCCccCCce
Confidence 89999999 5899999998884 899999999987776654
No 93
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=41.20 E-value=21 Score=30.49 Aligned_cols=45 Identities=18% Similarity=0.328 Sum_probs=0.0
Q ss_pred HHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 41 KFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 41 ~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
+.|++... .++++.+++.||++++.+.++.+.|. .++.| |+.++.
T Consensus 145 ~~lk~i~~-----~~~~ipvvaiGGI~~~n~~~~l~agg-~~~v~-gS~i~~ 189 (214)
T 1wbh_A 145 KALQAIAG-----PFSQVRFCPTGGISPANYRDYLALKS-VLCIG-GSWLVP 189 (214)
T ss_dssp HHHHHHHT-----TCTTCEEEEBSSCCTTTHHHHHTSTT-BSCEE-EGGGSC
T ss_pred HHHHHHhh-----hCCCCeEEEECCCCHHHHHHHHhcCC-CeEEE-eccccC
No 94
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=40.54 E-value=69 Score=26.70 Aligned_cols=50 Identities=18% Similarity=0.131 Sum_probs=34.4
Q ss_pred HHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC
Q 024420 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN 67 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld 67 (268)
|.-.++..|.+.|+.+..+++=.-|...+...+++.+++ .+ -|+.|||+.
T Consensus 24 N~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~----------~D-lVittGG~g 73 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEV----------SD-LVVSSGGLG 73 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHH----------CS-EEEEESCCS
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhc----------CC-EEEEcCCCc
Confidence 667788888888988766665555677777777777665 34 566676653
No 95
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=40.13 E-value=68 Score=28.90 Aligned_cols=72 Identities=17% Similarity=0.229 Sum_probs=47.0
Q ss_pred HHHHHHhhcCCCccEEee--C-CCChHHHHHHHHHHHHHHhHhhCCCCCCCeE-EEEeCCCCH----HHHHHHhhcCCcc
Q 024420 10 AVALALNDLGYKAVGIRL--D-SGDLAYLSCEARKFFRTIEKEFGVPDFEKMS-ITASNDLNE----ETLDALNKQGHEV 81 (268)
Q Consensus 10 ~Va~~L~~~G~~l~GVRl--D-SGDl~~ls~~~R~~ld~~~~~l~~~G~~~vk-Ii~S~~Lde----~~I~~l~~~g~~i 81 (268)
..++++.++|..+.+|=. | +|++..+..-++. ++.. ..+. |+++||+++ +.+....+.|+
T Consensus 181 ~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~-~~~~---------~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa-- 248 (304)
T 1to3_A 181 DAAKELGDSGADLYKVEMPLYGKGARSDLLTASQR-LNGH---------INMPWVILSSGVDEKLFPRAVRVAMEAGA-- 248 (304)
T ss_dssp HHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHH-HHHT---------CCSCEEECCTTSCTTTHHHHHHHHHHTTC--
T ss_pred HHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHh-cccc---------CCCCeEEEecCCCHHHHHHHHHHHHHcCC--
Confidence 336666677877766654 2 2565554433333 4432 3446 999999988 45777777664
Q ss_pred cEEeecCccccc
Q 024420 82 DAFGIGTYLVTC 93 (268)
Q Consensus 82 d~fGVGT~Lvt~ 93 (268)
++|-||.++...
T Consensus 249 ~Gv~vGRaI~q~ 260 (304)
T 1to3_A 249 SGFLAGRAVWSS 260 (304)
T ss_dssp CEEEESHHHHGG
T ss_pred eEEEEehHHhCc
Confidence 899999999875
No 96
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=40.03 E-value=29 Score=32.42 Aligned_cols=92 Identities=23% Similarity=0.249 Sum_probs=53.8
Q ss_pred HHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEee
Q 024420 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGI 86 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGV 86 (268)
...+.++++.+.|.++.-|-.--|....+.. ..+.+.+. ++++.|++.+-.+.+....+.+.|+.....|+
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e-~I~~ir~~--------~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~ 170 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAHAKYVGK-TLKSLRQL--------LGSRCIMAGNVATYAGADYLASCGADIIKAGI 170 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSHHHHH-HHHHHHHH--------HTTCEEEEEEECSHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCcHhHHH-HHHHHHHh--------cCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcC
Confidence 4566777788888775444333365433222 22233332 14578888778899999999999976544455
Q ss_pred c--Ccccc----cCCCCccceEEEEeE
Q 024420 87 G--TYLVT----CYAQAALGCVFKLVE 107 (268)
Q Consensus 87 G--T~Lvt----~~~~p~l~~vyKLve 107 (268)
| +...| ....|.+..++++++
T Consensus 171 g~G~~~~tr~~~g~g~p~l~aI~~~~~ 197 (361)
T 3r2g_A 171 GGGSVCSTRIKTGFGVPMLTCIQDCSR 197 (361)
T ss_dssp SSSSCHHHHHHHCCCCCHHHHHHHHTT
T ss_pred CCCcCccccccCCccHHHHHHHHHHHH
Confidence 4 22222 334566666655543
No 97
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=39.81 E-value=19 Score=32.28 Aligned_cols=38 Identities=26% Similarity=0.334 Sum_probs=32.1
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCC
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQ 96 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~ 96 (268)
++.|+++||+ |.+.+.++...| .|+..|||.+..+...
T Consensus 172 ~iPviaaGGI~~~~~v~~al~~G--AdgV~vGs~~~~~~e~ 210 (328)
T 2gjl_A 172 RVPIIASGGFADGRGLVAALALG--ADAINMGTRFLATREC 210 (328)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHTSSSS
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHcCccc
Confidence 4689999999 788998888777 6899999999986653
No 98
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=39.35 E-value=72 Score=28.70 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=29.8
Q ss_pred CCeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCccccc
Q 024420 56 EKMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 56 ~~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
.++.|+++||+. ...+.+....| .|+.+|||.++..
T Consensus 250 ~~ipvia~GGI~~~~d~~k~l~~G--Ad~V~iG~~~l~~ 286 (349)
T 1p0k_A 250 PASTMIASGGLQDALDVAKAIALG--ASCTGMAGHFLKA 286 (349)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHHHH
Confidence 467999999985 88888877778 5899999988763
No 99
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=39.30 E-value=39 Score=30.17 Aligned_cols=56 Identities=14% Similarity=0.248 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|++|.+. ++-.--.+++|+..|+.+.+-+.+|..+ ..+|++-||+.-..
T Consensus 183 ~evh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 238 (252)
T 2btm_A 183 NSVCGHIRSVVSRL---FGPEAAEAIRIQYGGSVKPDNIRDFLAQ-QQIDGALVGGASLE 238 (252)
T ss_dssp HHHHHHHHHHHHHH---HCHHHHTTSEEEEESSCCTTTHHHHHTS-TTCCEEEESGGGSS
T ss_pred HHHHHHHHHHHHHh---cCccccCceeEEEcCCCCHHHHHHHHcC-CCCCeeEecHHHhC
Confidence 34445577777653 1110014689999999999999999864 45999999987654
No 100
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=39.07 E-value=40 Score=30.02 Aligned_cols=56 Identities=16% Similarity=0.148 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|++|.+. ++-.--.+++|+..|+.+++-+.+|.++ ..+|++-||+.-..
T Consensus 183 qevh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 238 (250)
T 1yya_A 183 EAMHQAIRKALSER---YGEAFASRVRILYGGSVNPKNFADLLSM-PNVDGGLVGGASLE 238 (250)
T ss_dssp HHHHHHHHHHHHHH---HCHHHHTTCEEEEESSCCTTTHHHHHTS-TTCCEEEESGGGSS
T ss_pred HHHHHHHHHHHHHh---cCccccCceeEEEcCCCCHHHHHHHHcC-CCCCeeEeeHHHhC
Confidence 34445577777663 2110014689999999999999999875 35999999987654
No 101
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=39.05 E-value=22 Score=31.05 Aligned_cols=36 Identities=8% Similarity=0.206 Sum_probs=28.5
Q ss_pred CCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCccc
Q 024420 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 54 G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
.+++++++++||+|++.+.++++.|+ ..-+.|+.|+
T Consensus 156 p~p~i~~~ptGGI~~~N~~~~l~aGa--~~~vgGs~l~ 191 (217)
T 3lab_A 156 PFPDIQFCPTGGISKDNYKEYLGLPN--VICAGGSWLT 191 (217)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHHSTT--BCCEEESGGG
T ss_pred hhcCceEEEeCCCCHHHHHHHHHCCC--EEEEEChhhc
Confidence 57899999999999999999999886 2224455554
No 102
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=38.73 E-value=6.5 Score=33.69 Aligned_cols=36 Identities=25% Similarity=0.176 Sum_probs=0.0
Q ss_pred CeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++.++++||+. .+.+.++.+.| .|+.-||+.+...+
T Consensus 200 ~iPvia~GGI~~~~d~~~~~~~G--ad~v~vg~al~~~p 236 (247)
T 3tdn_A 200 TLPIIASGGAGKMEHFLEAFLRG--ADKVSINTAAVENP 236 (247)
T ss_dssp ---------------------------------------
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CcHhhccHHHHcCc
Confidence 45799999997 89999999887 78888999998754
No 103
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=37.72 E-value=38 Score=26.91 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=28.6
Q ss_pred CCCCeEEEEeCCCC-------HHHHHHHhhcCCcccEEeecCcc
Q 024420 54 DFEKMSITASNDLN-------EETLDALNKQGHEVDAFGIGTYL 90 (268)
Q Consensus 54 G~~~vkIi~S~~Ld-------e~~I~~l~~~g~~id~fGVGT~L 90 (268)
+.+++-|++|||.+ ...+..+.+.|..+.++|||+..
T Consensus 109 ~~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~ 152 (198)
T 1n3y_A 109 DAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAF 152 (198)
T ss_dssp TSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGG
T ss_pred CCceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccc
Confidence 45668899999874 34567777888999999999864
No 104
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=37.64 E-value=24 Score=32.50 Aligned_cols=47 Identities=17% Similarity=0.333 Sum_probs=32.8
Q ss_pred HHHHHHHHhHhhCCCCCCCeEEEEeCCCCH-----------HHHHHHhhcCCcccEEeecCccccc
Q 024420 39 ARKFFRTIEKEFGVPDFEKMSITASNDLNE-----------ETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 39 ~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde-----------~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
+|+.+++. +-++++++.. +-|. ..++.|+++|.|||+.|+=+|+...
T Consensus 162 Ar~a~~~~-------~dP~a~L~~N-DYn~e~~~~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~ 219 (335)
T 4f8x_A 162 AQEALAQI-------GANDVKLYYN-DYGIENPGTKSTAVLQLVSNLRKRGIRIDGVGLESHFIVG 219 (335)
T ss_dssp HHHHHHHT-------TCTTSEEEEE-ESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETT
T ss_pred HHHhcccc-------CCCCcEEEEe-cccccCCcHhHHHHHHHHHHHHHCCCCcceeeeeeeecCC
Confidence 55555553 4578888874 3331 2456667899999999999999764
No 105
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=37.58 E-value=27 Score=30.13 Aligned_cols=45 Identities=13% Similarity=0.344 Sum_probs=0.0
Q ss_pred HHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 41 KFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 41 ~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
+.|++... .++++.+++.||+|++.+.++.+.|. .++.| |+.|+.
T Consensus 146 ~~lk~l~~-----~~~~ipvvaiGGI~~~N~~~~l~agg-a~~v~-gS~i~~ 190 (224)
T 1vhc_A 146 KMIKALLG-----PYAQLQIMPTGGIGLHNIRDYLAIPN-IVACG-GSWFVE 190 (224)
T ss_dssp HHHHHHHT-----TTTTCEEEEBSSCCTTTHHHHHTSTT-BCCEE-ECGGGC
T ss_pred HHHHHHHh-----hCCCCeEEEECCcCHHHHHHHHhcCC-CEEEE-EchhcC
No 106
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=37.01 E-value=45 Score=28.02 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=29.9
Q ss_pred CeEEEEeCCCCH-HHHHHHhhc---CCcccEEeecCccccc
Q 024420 57 KMSITASNDLNE-ETLDALNKQ---GHEVDAFGIGTYLVTC 93 (268)
Q Consensus 57 ~vkIi~S~~Lde-~~I~~l~~~---g~~id~fGVGT~Lvt~ 93 (268)
++.|+++||++. +.+.++.+. | .|++-||+.+...
T Consensus 190 ~ipvia~GGI~~~~d~~~~~~~~~~G--adgv~vG~al~~~ 228 (244)
T 1vzw_A 190 DRPVVASGGVSSLDDLRAIAGLVPAG--VEGAIVGKALYAK 228 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGT--EEEEEECHHHHTT
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCC--CceeeeeHHHHcC
Confidence 468999999995 999999877 6 6889999999864
No 107
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=37.00 E-value=63 Score=28.81 Aligned_cols=34 Identities=9% Similarity=0.076 Sum_probs=28.7
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
++.|+++||+ +.+.+.++.+.| .|..+|||.++.
T Consensus 289 ~ipVi~~GGI~~~~da~~~l~~G--Ad~V~igr~~l~ 323 (336)
T 1f76_A 289 RLPIIGVGGIDSVIAAREKIAAG--ASLVQIYSGFIF 323 (336)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHCC--CCEEEeeHHHHh
Confidence 5789999998 578888888888 689999998764
No 108
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=36.71 E-value=59 Score=27.94 Aligned_cols=36 Identities=17% Similarity=0.445 Sum_probs=27.6
Q ss_pred CCCCeEEEEeCCCCH------HHHHHHhhcCCcccEEeecCc
Q 024420 54 DFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTY 89 (268)
Q Consensus 54 G~~~vkIi~S~~Lde------~~I~~l~~~g~~id~fGVGT~ 89 (268)
+..++-|++|||.+- ..++.+.+.|..+.++|||..
T Consensus 127 ~~~~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~ 168 (281)
T 4hqf_A 127 NANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQG 168 (281)
T ss_dssp TCEEEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSS
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 356788999999863 344556678899999999986
No 109
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=36.07 E-value=73 Score=26.76 Aligned_cols=72 Identities=14% Similarity=0.206 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhcCCCccEEeeC-------CC-ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHhhc
Q 024420 7 NFCAVALALNDLGYKAVGIRLD-------SG-DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQ 77 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlD-------SG-Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld-e~~I~~l~~~ 77 (268)
+..+.++++.+.|.....+ .+ +| | ..+.+++++. .++.++++||+. .+.+.++.+.
T Consensus 145 ~~~e~~~~~~~~G~~~i~~-t~~~~~g~~~g~~-~~~i~~l~~~-------------~~iPvia~GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVH-TEIEKDGTLQEHD-FSLTKKIAIE-------------AEVKVLAAGGISSENSLKTAQKV 209 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEE-EETTHHHHTCCCC-HHHHHHHHHH-------------HTCEEEEESSCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEE-EeecccccCCcCC-HHHHHHHHHh-------------cCCcEEEECCCCCHHHHHHHHhc
Confidence 4567777777788775555 22 22 2 2222333322 245899999999 5999999876
Q ss_pred -----CCcccEEeecCcccccC
Q 024420 78 -----GHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 78 -----g~~id~fGVGT~Lvt~~ 94 (268)
|. .|+.=||+.|....
T Consensus 210 ~~~~~G~-adgv~vgsal~~~~ 230 (241)
T 1qo2_A 210 HTETNGL-LKGVIVGRAFLEGI 230 (241)
T ss_dssp HHHTTTS-EEEEEECHHHHTTS
T ss_pred ccccCCe-EeEEEeeHHHHcCC
Confidence 52 68888999998653
No 110
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=35.80 E-value=28 Score=31.26 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=31.5
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCC
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYA 95 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~ 95 (268)
++.+++.+|+ +.+.+..+.+.| .++|-||+.|+.+.+
T Consensus 220 ~~~vIaesGI~t~edv~~l~~~G--a~gvLVG~almr~~d 257 (272)
T 3tsm_A 220 DRLLVGESGIFTHEDCLRLEKSG--IGTFLIGESLMRQHD 257 (272)
T ss_dssp TSEEEEESSCCSHHHHHHHHTTT--CCEEEECHHHHTSSC
T ss_pred CCcEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHcCCcC
Confidence 4678888888 999999999887 789999999987543
No 111
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=35.22 E-value=50 Score=29.55 Aligned_cols=55 Identities=18% Similarity=0.221 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHH-hHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTI-EKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~-~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|++|.+. +.+. -.+++|+..|+.+..-+.+|..+ ..+|++-||+.-..
T Consensus 187 qevh~~IR~~l~~~~~~~~----a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 242 (257)
T 2yc6_A 187 EEVHVGLRKWFVEKVAAEG----AQHIRIIYGGSANGSNNEKLGQC-PNIDGFLVGGASLK 242 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HTTCEEEEESSCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHHHhcChhh----cccceEEEcCccCHHHHHHHHcC-CCCCeeeecHHHHH
Confidence 34445577777653 2111 14689999999999999999875 35999999987654
No 112
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=34.65 E-value=71 Score=25.70 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=26.8
Q ss_pred CCCCeEEEEeCCCC-----HHHHHHHhhcCCcccEEeecCc
Q 024420 54 DFEKMSITASNDLN-----EETLDALNKQGHEVDAFGIGTY 89 (268)
Q Consensus 54 G~~~vkIi~S~~Ld-----e~~I~~l~~~g~~id~fGVGT~ 89 (268)
+..++-|++|||.+ ...+..+.+.|..+.++|+|+.
T Consensus 110 ~~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~ 150 (218)
T 3ibs_A 110 GVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMP 150 (218)
T ss_dssp SCCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCT
T ss_pred CCCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCC
Confidence 45568899999986 3445555667888999999985
No 113
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=34.31 E-value=35 Score=30.57 Aligned_cols=56 Identities=13% Similarity=0.167 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|++|.+. ++-.--.+++|+..|+.+++-+.+|..+ ..+|++.||+.-..
T Consensus 185 qevh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgASLk 240 (255)
T 1b9b_A 185 QEVHAFIRKLLSEM---YDEETAGSIRILYGGSIKPDNFLGLIVQ-KDIDGGLVGGASLK 240 (255)
T ss_dssp HHHHHHHHHHHHHH---SCHHHHHHSEEEEESSCCHHHHTTTSSS-TTCCEEEESGGGTS
T ss_pred HHHHHHHHHHHHHh---cCccccCcceEEEcCcCCHHHHHHHHcC-CCCCeeEeehHhhc
Confidence 34445577777663 1100013589999999999999999854 35999999987654
No 114
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=34.16 E-value=1.1e+02 Score=25.67 Aligned_cols=78 Identities=13% Similarity=0.124 Sum_probs=48.0
Q ss_pred HHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHhhcCCcccEEe
Q 024420 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEVDAFG 85 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld-e~~I~~l~~~g~~id~fG 85 (268)
+.+++|+++.+.|....-|+--+++-..... ..+.+.+... ..++.|++.|+++ ++.+.++.+.| .|..-
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~-~~~~i~~i~~------~~~ipvi~~ggI~~~~~~~~~~~~G--ad~V~ 101 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKT-MLELVEKVAE------QIDIPFTVGGGIHDFETASELILRG--ADKVS 101 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHH-HHHHHHHHHT------TCCSCEEEESSCCSHHHHHHHHHTT--CSEEE
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcc-cHHHHHHHHH------hCCCCEEEeCCCCCHHHHHHHHHcC--CCEEE
Confidence 5788899998889876666643433211111 1111222211 1356788888887 56688888877 57778
Q ss_pred ecCccccc
Q 024420 86 IGTYLVTC 93 (268)
Q Consensus 86 VGT~Lvt~ 93 (268)
+|+.+...
T Consensus 102 lg~~~l~~ 109 (253)
T 1thf_D 102 INTAAVEN 109 (253)
T ss_dssp ESHHHHHC
T ss_pred EChHHHhC
Confidence 88887653
No 115
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=33.47 E-value=1.4e+02 Score=25.89 Aligned_cols=72 Identities=11% Similarity=0.209 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHhhcCCCccEEeeCCCCh---------------HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-H
Q 024420 5 VPNFCAVALALNDLGYKAVGIRLDSGDL---------------AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-E 68 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRlDSGDl---------------~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld-e 68 (268)
+..|++++.++ |..+ |-..+|=- ..-.+-+|+..++. | .+++|-+|||+- .
T Consensus 130 i~~a~~ia~ea---GADf--VKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~-------g-~~v~vKaaGGirt~ 196 (226)
T 1vcv_A 130 RYTLYDIIAEA---GAHF--IKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEK-------G-YRLGVKMAGGIRTR 196 (226)
T ss_dssp HHHHHHHHHHH---TCSE--EECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHH-------T-CCCEEEEESSCCSH
T ss_pred HHHHHHHHHHc---CCCE--EEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHh-------C-CCceEEEeCCCCCH
Confidence 44567777655 5443 55554421 11234456665555 2 568999999998 6
Q ss_pred HHHHHHhhc---CCcccEEeecCc
Q 024420 69 ETLDALNKQ---GHEVDAFGIGTY 89 (268)
Q Consensus 69 ~~I~~l~~~---g~~id~fGVGT~ 89 (268)
+....+.+. |+..+-|=+||+
T Consensus 197 ~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 197 EQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp HHHHHHHHHHCSCSCTTTEEEEES
T ss_pred HHHHHHHHHHHCCCCcCCceEecC
Confidence 677777777 988788888886
No 116
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=33.47 E-value=30 Score=31.25 Aligned_cols=38 Identities=18% Similarity=0.315 Sum_probs=32.2
Q ss_pred CeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCcccccCCC
Q 024420 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQ 96 (268)
Q Consensus 57 ~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~~~~ 96 (268)
++.|+++||++ .+.+.++...| .++..|||.+..+...
T Consensus 176 ~iPviaaGGI~~~~dv~~al~~G--A~gV~vGs~~~~~~e~ 214 (326)
T 3bo9_A 176 NIPVIAAGGIADGRGMAAAFALG--AEAVQMGTRFVASVES 214 (326)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHTBSSC
T ss_pred CCCEEEECCCCCHHHHHHHHHhC--CCEEEechHHHcCccc
Confidence 45799999997 99999998877 5899999999986654
No 117
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=33.35 E-value=21 Score=32.86 Aligned_cols=75 Identities=29% Similarity=0.290 Sum_probs=50.8
Q ss_pred HHHHHHHHHHhhcCCCccEEeeCC-------CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcC
Q 024420 6 PNFCAVALALNDLGYKAVGIRLDS-------GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQG 78 (268)
Q Consensus 6 ~nai~Va~~L~~~G~~l~GVRlDS-------GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g 78 (268)
.-++.+++.+.+.|....++.-.+ ++...++.++|+. ....|++.+..+.+.++++++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~-------------~~~~v~~~g~~~~~~ae~~l~~G 307 (358)
T 4a3u_A 241 QVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKV-------------FKPPLVLNQDYTFETAQAALDSG 307 (358)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHH-------------CCSCEEEESSCCHHHHHHHHHHT
T ss_pred HHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHh-------------cCCcEEEeCCCCHHHHHHHHHcC
Confidence 345677777777777666664321 1223445555532 12357789999999999999887
Q ss_pred CcccEEeecCcccccC
Q 024420 79 HEVDAFGIGTYLVTCY 94 (268)
Q Consensus 79 ~~id~fGVGT~Lvt~~ 94 (268)
. .|..|+|-.++-.+
T Consensus 308 ~-aD~V~~gR~~ladP 322 (358)
T 4a3u_A 308 V-ADAISFGRPFIGNP 322 (358)
T ss_dssp S-CSEEEESHHHHHCT
T ss_pred C-ceEeHhhHHHHhCh
Confidence 4 78999999998754
No 118
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=33.10 E-value=30 Score=30.79 Aligned_cols=34 Identities=12% Similarity=0.119 Sum_probs=28.6
Q ss_pred EEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 59 SITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 59 kIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
-++++||+ +.+.+.++.+.| .|++.||+.+..+.
T Consensus 211 i~~a~GGI~~~~d~~~~~~~G--adgV~vGsai~~~~ 245 (305)
T 2nv1_A 211 VNFAAGGVATPADAALMMQLG--ADGVFVGSGIFKSD 245 (305)
T ss_dssp CEEBCSCCCSHHHHHHHHHTT--CSCEEECGGGGGSS
T ss_pred EEEeccCCCCHHHHHHHHHcC--CCEEEEcHHHHcCC
Confidence 34499999 999999999877 68999999998753
No 119
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=32.88 E-value=2e+02 Score=24.96 Aligned_cols=63 Identities=13% Similarity=0.063 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCC
Q 024420 5 VPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGH 79 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~ 79 (268)
...++.+|++|.+.|.+..=|=+.|.+-....+++++.+ +++.|=+..=+|.+..+...+.|+
T Consensus 24 ~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~------------p~~~IGAGTVlt~~~a~~ai~AGA 86 (217)
T 3lab_A 24 LVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAV------------PEAIVGAGTVCTADDFQKAIDAGA 86 (217)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC------------TTSEEEEECCCSHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHC------------CCCeEeeccccCHHHHHHHHHcCC
Confidence 457889999999999887777777777444443343332 344555555666666666666555
No 120
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=32.65 E-value=43 Score=28.03 Aligned_cols=72 Identities=21% Similarity=0.268 Sum_probs=46.7
Q ss_pred HHHHHHHHHhhcCCCccEEe---eC-C--C-ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCH-HHHHHHhhc-
Q 024420 7 NFCAVALALNDLGYKAVGIR---LD-S--G-DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNE-ETLDALNKQ- 77 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVR---lD-S--G-Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde-~~I~~l~~~- 77 (268)
+.++.++.+.+.|.....+= .| + | |+ .+.++++ +. .++.|+++||++. +.+.++.+.
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~-~~~~~l~----~~---------~~ipvia~GGI~~~~d~~~~~~~~ 215 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLGGPNL-DLLAGVA----DR---------TDAPVIASGGVSSLDDLRAIATLT 215 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCH-HHHHHHH----TT---------CSSCEEEESCCCSHHHHHHHHTTG
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccCCCCH-HHHHHHH----Hh---------CCCCEEEECCCCCHHHHHHHHhhc
Confidence 45777777777777654442 22 1 2 21 1222222 21 3568999999995 999999876
Q ss_pred --CCcccEEeecCcccccC
Q 024420 78 --GHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 78 --g~~id~fGVGT~Lvt~~ 94 (268)
| .|++-||+.+....
T Consensus 216 ~~G--ad~v~vG~al~~~~ 232 (244)
T 2y88_A 216 HRG--VEGAIVGKALYARR 232 (244)
T ss_dssp GGT--EEEEEECHHHHTTS
T ss_pred cCC--CCEEEEcHHHHCCC
Confidence 5 68899999987643
No 121
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=32.51 E-value=12 Score=31.71 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=29.3
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCccccc
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
++.|++.||++++.+.++.+.| .|++.||+.++..
T Consensus 166 ~~pi~v~GGI~~~~~~~~~~aG--Ad~vvvGsaI~~a 200 (218)
T 3jr2_A 166 GIELSITGGIVPEDIYLFEGIK--TKTFIAGRALAGA 200 (218)
T ss_dssp TCEEEEESSCCGGGGGGGTTSC--EEEEEESGGGSHH
T ss_pred CCCEEEECCCCHHHHHHHHHcC--CCEEEEchhhcCC
Confidence 5689999999999998888776 6888999988764
No 122
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=32.07 E-value=46 Score=27.05 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=26.9
Q ss_pred CCCCeEEEEeCCCCH--------HHHHHHhhcCCcccEEeecCc
Q 024420 54 DFEKMSITASNDLNE--------ETLDALNKQGHEVDAFGIGTY 89 (268)
Q Consensus 54 G~~~vkIi~S~~Lde--------~~I~~l~~~g~~id~fGVGT~ 89 (268)
+..++-|++|||-+. ..++.+.+.|..+-++|||..
T Consensus 114 ~~~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~ 157 (202)
T 1ijb_A 114 EASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPH 157 (202)
T ss_dssp TSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTT
T ss_pred CCCeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCc
Confidence 456788999999763 234566678888999999974
No 123
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=31.79 E-value=37 Score=30.26 Aligned_cols=56 Identities=16% Similarity=0.225 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|++|.+. ++-.--.+++|+..|+.++.-+.+|..+ ..+|++.||+.-..
T Consensus 184 ~evh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 239 (250)
T 2j27_A 184 QEAHALIRSWVSSK---IGADVAGELRILYGGSVNGKNARTLYQQ-RDVNGFLVGGASLK 239 (250)
T ss_dssp HHHHHHHHHHHHHH---TCHHHHHHCCEEEESSCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHHHh---cChhhcccccEEEcCCCCHHHHHHHHcC-CCCCeeeeehHHHH
Confidence 34445577777663 1110013589999999999999999864 45999999987654
No 124
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=30.92 E-value=43 Score=29.80 Aligned_cols=55 Identities=22% Similarity=0.353 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
+....+|++|.+. ++-.--.+++|+..|+.+..-+.+|.++ ..+|++.||+.-..
T Consensus 183 evh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 237 (248)
T 1o5x_A 183 LVHKEIRKIVKDT---CGEKQANQIRILYGGSVNTENCSSLIQQ-EDIDGFLVGNASLK 237 (248)
T ss_dssp HHHHHHHHHHHHH---TCHHHHHHSEEEECSCCCTTTHHHHHTS-TTCCEEEECGGGGS
T ss_pred HHHHHHHHHHHHh---cCccccCcceEEEcCCCCHHHHHHHHcC-CCCCeeEeeHHHHH
Confidence 4445577777663 1100013589999999999999999874 45999999987655
No 125
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=30.89 E-value=41 Score=30.05 Aligned_cols=55 Identities=15% Similarity=0.170 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|++|.+.+.+. -.+++|+..|+.++.-+.+|..+ ..+|++-||+.-..
T Consensus 184 ~evh~~IR~~l~~~~~~~----a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 238 (255)
T 1tre_A 184 QAVHKFIRDHIAKVDANI----AEQVIIQYGGSVNASNAAELFAQ-PDIDGALVGGASLK 238 (255)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHHCEEEECSCCCTTTHHHHHTS-TTCCEEEESGGGGC
T ss_pred HHHHHHHHHHHHhcChhh----cCcccEEEcCCCCHHHHHHHHcC-CCCCeeEecHHHhC
Confidence 344455777776532211 14689999999999999999875 46999999987654
No 126
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=30.51 E-value=1e+02 Score=28.27 Aligned_cols=71 Identities=14% Similarity=0.086 Sum_probs=45.1
Q ss_pred HHHHHHhhcCCCccEE-----e-eCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHHHHhhcCCccc
Q 024420 10 AVALALNDLGYKAVGI-----R-LDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDALNKQGHEVD 82 (268)
Q Consensus 10 ~Va~~L~~~G~~l~GV-----R-lDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~I~~l~~~g~~id 82 (268)
+.|+.+.+.|.....| | +|+|- ..+ ..+.++.+.. ..++.|+++||+ +...+.+++..| .|
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~~-~~~-~~l~~v~~~~--------~~~ipvia~GGI~~~~D~~k~l~~G--Ad 304 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYVP-ATI-MALEEVVKAA--------QGRIPVFLDGGVRRGTDVFKALALG--AA 304 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTCC-CHH-HHHHHHHHHT--------TTSSCEEEESSCCSHHHHHHHHHHT--CS
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCcc-cHH-HHHHHHHHHh--------CCCCEEEEECCCCCHHHHHHHHHcC--CC
Confidence 4556666778766555 3 45542 211 1122222221 136899999999 677888888888 68
Q ss_pred EEeecCcccc
Q 024420 83 AFGIGTYLVT 92 (268)
Q Consensus 83 ~fGVGT~Lvt 92 (268)
+.+||+.+..
T Consensus 305 aV~iGr~~l~ 314 (370)
T 1gox_A 305 GVFIGRPVVF 314 (370)
T ss_dssp EEEECHHHHH
T ss_pred EEeecHHHHH
Confidence 9999998865
No 127
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=30.48 E-value=1.5e+02 Score=22.88 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=25.0
Q ss_pred CCCCeEEEEeCCCCH--------HHHHHHhhcCCcccEEeecC
Q 024420 54 DFEKMSITASNDLNE--------ETLDALNKQGHEVDAFGIGT 88 (268)
Q Consensus 54 G~~~vkIi~S~~Lde--------~~I~~l~~~g~~id~fGVGT 88 (268)
+..++-|++|||.+. ..++.+.+.|..+..+|+|.
T Consensus 102 ~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg~ 144 (182)
T 1shu_X 102 KTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLD 144 (182)
T ss_dssp GSCEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCCc
Confidence 456788999999842 23445556788888999983
No 128
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=30.16 E-value=1.1e+02 Score=31.40 Aligned_cols=68 Identities=19% Similarity=0.217 Sum_probs=43.5
Q ss_pred hcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 17 DLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 17 ~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
+.+..+.|+=-=.+.-..+..++.+.|.++ |..+++|++.|-.=......+.+.|+ -..|+.||++..
T Consensus 653 e~~adiVglSsl~~~~~~~~~~vi~~Lr~~-------G~~dv~VivGG~~P~~d~~~l~~~Ga-D~~f~pgtd~~e 720 (762)
T 2xij_A 653 DADVHAVGVSTLAAGHKTLVPELIKELNSL-------GRPDILVMCGGVIPPQDYEFLFEVGV-SNVFGPGTRIPK 720 (762)
T ss_dssp HTTCSEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTSEEEEEESCCGGGHHHHHHHTC-CEEECTTCCHHH
T ss_pred HcCCCEEEEeeecHHHHHHHHHHHHHHHhc-------CCCCCEEEEeCCCCcccHHHHHhCCC-CEEeCCCCCHHH
Confidence 445556666433334456677788888887 88889999988332223445566664 236788987755
No 129
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=29.97 E-value=61 Score=27.81 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=30.3
Q ss_pred CeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCccccc
Q 024420 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTC 93 (268)
Q Consensus 57 ~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~ 93 (268)
++.|++.+|++ .+.+.++.+.| .|++-|||.++..
T Consensus 201 ~~pI~vgGGI~~~e~~~~~~~~G--AdgvvVGSai~~~ 236 (262)
T 1rd5_A 201 NKPVAVGFGISKPEHVKQIAQWG--ADGVIIGSAMVRQ 236 (262)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCeEEEECCcCCHHHHHHHHHcC--CCEEEEChHHHhH
Confidence 56899999999 99999999877 4788899998864
No 130
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=29.77 E-value=47 Score=29.61 Aligned_cols=56 Identities=11% Similarity=0.098 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
......+|+.|.+. ++-.--++++|+..|+.+++-+.+|..+ ..||++-||+.-..
T Consensus 187 qevh~~IR~~l~~~---~~~~~a~~~rIlYGGSV~~~N~~~l~~~-~diDG~LVGgASL~ 242 (254)
T 3m9y_A 187 NEMCAFVRQTIADL---SSKEVSEATRIQYGGSVKPNNIKEYMAQ-TDIDGALVGGASLK 242 (254)
T ss_dssp HHHHHHHHHHHHHH---SCHHHHTTSEEEECSCCCTTTHHHHHTS-TTCCEEEESGGGSS
T ss_pred HHHHHHHHHHHHHh---cChhhcCCccEEEcCCcCHHHHHHHHcC-CCCCeEEeeHHhhC
Confidence 34444478877664 1100014789999999999999999864 35999999987543
No 131
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=28.86 E-value=51 Score=31.74 Aligned_cols=58 Identities=12% Similarity=0.107 Sum_probs=44.3
Q ss_pred CChHHHHHHHHHHHHHH-hHhhCCCCCCCeEEEEeCCCCHHHHHHHhh-cCCcccEEeecCc
Q 024420 30 GDLAYLSCEARKFFRTI-EKEFGVPDFEKMSITASNDLNEETLDALNK-QGHEVDAFGIGTY 89 (268)
Q Consensus 30 GDl~~ls~~~R~~ld~~-~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~-~g~~id~fGVGT~ 89 (268)
.+......++++.|.++ ..++..+ ..+-+..|||+|=..|..+.. .+.++..|.||..
T Consensus 217 ~~~~~~~~~l~~~L~~aV~~rl~sd--~~vgv~LSGGlDSS~vaala~~~~~~v~tfti~~~ 276 (513)
T 1jgt_A 217 LPEGEAVAAVRAALEKAVAQRVTPG--DTPLVVLSGGIDSSGVAACAHRAAGELDTVSMGTD 276 (513)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCTT--CCCEEECCSSHHHHHHHHHHHHHHSSCEEEEEECS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC--CcEEEECCCcHHHHHHHHHHHHhCCCceEEEcCCC
Confidence 35677788899999988 5555432 467899999999999998874 3456888988864
No 132
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=28.82 E-value=3.6e+02 Score=25.10 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=32.2
Q ss_pred CCeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCc
Q 024420 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (268)
Q Consensus 56 ~~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~ 98 (268)
.++.|++|||+ +...+..+...| .++-++|+.+..+...|.
T Consensus 335 ~~ipvia~GGi~~~~di~kal~~G--A~~v~vG~~~~~~~e~~~ 376 (491)
T 1zfj_A 335 YGKTIIADGGIKYSGDIVKALAAG--GNAVMLGSMFAGTDEAPG 376 (491)
T ss_dssp TTCEEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBSSCCC
T ss_pred cCCCEEeeCCCCCHHHHHHHHHcC--CcceeeCHHhhCCCcCcc
Confidence 35789999997 678888888888 678889999987655443
No 133
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=28.74 E-value=1.3e+02 Score=25.24 Aligned_cols=62 Identities=15% Similarity=-0.030 Sum_probs=39.0
Q ss_pred HhhcCCCccEEeeCC-CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC--HHHHHHHhhcCCcccEEe
Q 024420 15 LNDLGYKAVGIRLDS-GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN--EETLDALNKQGHEVDAFG 85 (268)
Q Consensus 15 L~~~G~~l~GVRlDS-GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld--e~~I~~l~~~g~~id~fG 85 (268)
+++.|+++.-+..+| +|.......++.++.. + -+.-|+.+.+.+ ...+..+.+.|.|+..++
T Consensus 29 a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~--------~-vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~ 93 (297)
T 3rot_A 29 AEELKVDLQILAPPGANDVPKQVQFIESALAT--------Y-PSGIATTIPSDTAFSKSLQRANKLNIPVIAVD 93 (297)
T ss_dssp HHHHTCEEEEECCSSSCCHHHHHHHHHHHHHT--------C-CSEEEECCCCSSTTHHHHHHHHHHTCCEEEES
T ss_pred HHHhCcEEEEECCCCcCCHHHHHHHHHHHHHc--------C-CCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEc
Confidence 455688875444444 4877666556555544 3 333455555555 778888888888877665
No 134
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=28.43 E-value=43 Score=29.93 Aligned_cols=55 Identities=13% Similarity=0.158 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|++|.+.+.+. -.+++|+..|+.+++-+.+|..+ ..+|++-||+.-..
T Consensus 186 ~evh~~IR~~l~~~~~~~----a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 240 (256)
T 1aw2_A 186 QRIHAQIRAHIAEKSEAV----AKNVVIQYGGSVKPENAAAYFAQ-PDIDGALVGGAALD 240 (256)
T ss_dssp HHHHHHHHHHHHTTCHHH----HHHCEEEECSCCCTTTHHHHTTS-TTCCEEEESGGGGC
T ss_pred HHHHHHHHHHHHhcChhh----cccccEEEcCCCCHHHHHHHHcC-CCCCeeeecHHHhC
Confidence 344445777775521110 13589999999999999999875 35999999987654
No 135
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=28.41 E-value=1.3e+02 Score=24.49 Aligned_cols=17 Identities=12% Similarity=0.172 Sum_probs=10.1
Q ss_pred HHHHHHHhhcCCCccEE
Q 024420 9 CAVALALNDLGYKAVGI 25 (268)
Q Consensus 9 i~Va~~L~~~G~~l~GV 25 (268)
-.+++.|.+.|++-.++
T Consensus 109 ~~a~~~L~~~G~~~i~~ 125 (272)
T 3o74_A 109 RQLAASLLSSAPRSIAL 125 (272)
T ss_dssp HHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHCCCcEEEE
Confidence 34556677778764443
No 136
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=28.37 E-value=53 Score=27.01 Aligned_cols=38 Identities=5% Similarity=0.080 Sum_probs=28.3
Q ss_pred CCCCCeEEEEeCCCCHH------HHHHHhhcCCcccEEeecCcc
Q 024420 53 PDFEKMSITASNDLNEE------TLDALNKQGHEVDAFGIGTYL 90 (268)
Q Consensus 53 ~G~~~vkIi~S~~Lde~------~I~~l~~~g~~id~fGVGT~L 90 (268)
++..++-|++|||.+.. .++.+.+.|..+.++|||+..
T Consensus 122 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG~~~ 165 (223)
T 2b2x_A 122 RGVKKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAILGHY 165 (223)
T ss_dssp TTSEEEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEECGGG
T ss_pred CCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEecCcc
Confidence 35667889999988643 455666778889999999863
No 137
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=28.31 E-value=53 Score=29.22 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|+.|.+. ++-.--.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 185 ~evh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 240 (251)
T 2vxn_A 185 QEVHLLLRKWVSEN---IGTDVAAKLRILYGGSVNAANAATLYAK-PDINGFLVGGASLK 240 (251)
T ss_dssp HHHHHHHHHHHHHH---TCHHHHHHCEEEEESSCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHHHh---cChhhcccccEEEcCCcCHhHHHHHhcC-CCCCeeeecHHHHH
Confidence 34444577777663 1100013589999999999999999865 46999999987655
No 138
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=26.86 E-value=48 Score=29.43 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|+.|.+. ++-.--.+++|+..|+.++.-+.+|..+ ..+|++.||+.-..
T Consensus 182 ~evh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 237 (248)
T 1r2r_A 182 QEVHEKLRGWLKSN---VSDAVAQSTRIIYGGSVTGATCKELASQ-PDVDGFLVGGASLK 237 (248)
T ss_dssp HHHHHHHHHHHHHH---TCHHHHHHCCEEECSCCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHHHh---cChhhcccccEEEcCCcCHhHHHHHHcC-CCCCeeEechHHhC
Confidence 34445577777663 1100013589999999999999999865 46999999987654
No 139
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=26.83 E-value=36 Score=30.87 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=30.3
Q ss_pred eEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 58 MSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 58 vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+.++++||+ +.+.+..+.+.| .|++-||+.|+.+.
T Consensus 210 VivvA~GGI~t~~dv~~~~~~G--AdgVlVGsai~~a~ 245 (297)
T 4adt_A 210 VVNFAAGGIATPADAAMCMQLG--MDGVFVGSGIFESE 245 (297)
T ss_dssp SEEEEESCCCSHHHHHHHHHTT--CSCEEESHHHHTSS
T ss_pred eEEEecCCCCCHHHHHHHHHcC--CCEEEEhHHHHcCC
Confidence 455699999 999999999988 78999999998754
No 140
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=26.39 E-value=48 Score=30.03 Aligned_cols=56 Identities=14% Similarity=0.204 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|+.|.+. ++-.--.+++|+..|+.+..-+.+|..+ ..||++.||+.-..
T Consensus 201 qevh~~IR~~l~~~---~~~~~a~~vrILYGGSV~~~N~~el~~~-~diDG~LVGgASLk 256 (275)
T 1mo0_A 201 QEVHEWIRAFLKEK---VSPAVADATRIIYGGSVTADNAAELGKK-PDIDGFLVGGASLK 256 (275)
T ss_dssp HHHHHHHHHHHHHH---TCHHHHHHSCEEEESSCCTTTHHHHTTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHHHh---hChhhcCcccEEEcCCCCHhhHHHHhcC-CCCCeeEechHHhC
Confidence 34445577777663 1100013589999999999999999865 46999999998765
No 141
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=26.36 E-value=64 Score=30.93 Aligned_cols=58 Identities=17% Similarity=0.173 Sum_probs=43.6
Q ss_pred CChHHHHHHHHHHHHHH-hHhhCCCCCCCeEEEEeCCCCHHHHHHHhh-cCCcccEEeecCc
Q 024420 30 GDLAYLSCEARKFFRTI-EKEFGVPDFEKMSITASNDLNEETLDALNK-QGHEVDAFGIGTY 89 (268)
Q Consensus 30 GDl~~ls~~~R~~ld~~-~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~-~g~~id~fGVGT~ 89 (268)
.+......++|+.|.++ ..++..+ ..+-+++|||+|=..|..+.. ++.++..|.+|..
T Consensus 214 ~~~~~~~~~l~~~L~~aV~~rl~sd--~~v~v~LSGGlDSs~vaala~~~~~~~~~~t~~~~ 273 (503)
T 1q15_A 214 LPREPLLALIDRYLNAPLEDLAPRF--DTVGIPLSGGLDSSLVTALASRHFKKLNTYSIGTE 273 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGGGC--SEEEEECCSSHHHHHHHHHHTTTCSEEEEEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC--CcEEEECCCCHHHHHHHHHHHHhCCCcEEEEEeCC
Confidence 35677788899999887 5544322 457799999999999998875 3457888888754
No 142
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=26.34 E-value=2e+02 Score=26.48 Aligned_cols=33 Identities=12% Similarity=0.117 Sum_probs=27.3
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCccc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
++.|+++||+ +.+.+.++...|+ |...|||.++
T Consensus 298 ~ipvI~~GGI~s~~da~~~l~~GA--d~V~vgra~l 331 (367)
T 3zwt_A 298 RVPIIGVGGVSSGQDALEKIRAGA--SLVQLYTALT 331 (367)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHTC--SEEEESHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHcCC--CEEEECHHHH
Confidence 6789999998 4777888887884 8899999985
No 143
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=26.13 E-value=61 Score=28.51 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=31.2
Q ss_pred CCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 56 ~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 187 ~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsl~ 222 (233)
T 2jgq_A 187 QKTPLLYGGSVNTQNAKEILGI-DSVDGLLIGSASWE 222 (233)
T ss_dssp TTSCEEEESSCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred cCCcEEEcCCcChhhHHHHhcC-CCCCeeEecHHHhC
Confidence 5789999999999999999865 46999999987654
No 144
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=26.12 E-value=33 Score=27.40 Aligned_cols=37 Identities=11% Similarity=0.221 Sum_probs=28.4
Q ss_pred CCCCeEEEEeCCCCH-------HHHHHHhhcCCcccEEeecCcc
Q 024420 54 DFEKMSITASNDLNE-------ETLDALNKQGHEVDAFGIGTYL 90 (268)
Q Consensus 54 G~~~vkIi~S~~Lde-------~~I~~l~~~g~~id~fGVGT~L 90 (268)
+.+++-|++|||.+- +.++.+.+.|..+.++|||...
T Consensus 105 ~~~~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~~~ 148 (194)
T 1mf7_A 105 NAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAF 148 (194)
T ss_dssp TSEEEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGG
T ss_pred CCCeEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecccc
Confidence 456788999998753 4567777888889999999864
No 145
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=25.84 E-value=69 Score=27.09 Aligned_cols=72 Identities=18% Similarity=0.147 Sum_probs=47.5
Q ss_pred HHHHHHHHHhhcCCCccEEe-eCC-C----ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHhhcCC
Q 024420 7 NFCAVALALNDLGYKAVGIR-LDS-G----DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGH 79 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVR-lDS-G----Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld-e~~I~~l~~~g~ 79 (268)
+.+++|+++.+.|.+..-|+ +|. + ....+ ++++- +. .++.++++|++. .+.+.++++.|
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~---i~~i~-~~---------~~ipvi~~Ggi~~~~~~~~~l~~G- 101 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEM---IRFVR-PL---------TTLPIIASGGAGKMEHFLEAFLRG- 101 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHH---HHHHG-GG---------CCSCEEEESCCCSHHHHHHHHHTT-
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHH---HHHHH-Hh---------CCCCEEEeCCCCCHHHHHHHHHcC-
Confidence 57889999999998765554 232 1 11122 22222 21 245788898885 57788888877
Q ss_pred cccEEeecCccccc
Q 024420 80 EVDAFGIGTYLVTC 93 (268)
Q Consensus 80 ~id~fGVGT~Lvt~ 93 (268)
.|..-+||.+...
T Consensus 102 -ad~V~ig~~~l~d 114 (247)
T 3tdn_A 102 -ADKVSINTAAVEN 114 (247)
T ss_dssp -CSEECCSHHHHHC
T ss_pred -CCeeehhhHHhhC
Confidence 7888999998763
No 146
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=25.58 E-value=53 Score=25.69 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=24.8
Q ss_pred CCCeEEEEeCCCCH--------HHHHHHhhcCCcccEEeec
Q 024420 55 FEKMSITASNDLNE--------ETLDALNKQGHEVDAFGIG 87 (268)
Q Consensus 55 ~~~vkIi~S~~Lde--------~~I~~l~~~g~~id~fGVG 87 (268)
..++-|++|||.+. ..+..+.+.|..+.++|||
T Consensus 106 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg 146 (185)
T 3n2n_F 106 TASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVK 146 (185)
T ss_dssp EEEEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECS
T ss_pred CCcEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEec
Confidence 45688999999873 3445566778888888988
No 147
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=25.56 E-value=1.6e+02 Score=26.20 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=27.7
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
++.|+++||+ +...+.+.+..| .|..+||+.+..
T Consensus 256 ~ipvia~GGI~~~~d~~kal~~G--Ad~V~igr~~l~ 290 (332)
T 1vcf_A 256 HLPLVASGGVYTGTDGAKALALG--ADLLAVARPLLR 290 (332)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEECGGGHH
T ss_pred CCeEEEECCCCCHHHHHHHHHhC--CChHhhhHHHHH
Confidence 5789999998 567777777778 589999998875
No 148
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=25.52 E-value=1.3e+02 Score=30.74 Aligned_cols=69 Identities=23% Similarity=0.298 Sum_probs=43.9
Q ss_pred hhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 16 NDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 16 ~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+.+..+.|+=-=.+.-..+..++.+.|.++ |..+++|++.|-.=......+.+.|+ -..|+.||.+..
T Consensus 644 ~e~~adiVglSsl~~~~~~~~~~vi~~L~~~-------G~~~i~VivGG~~p~~d~~~l~~~Ga-D~~f~~gt~~~e 712 (727)
T 1req_A 644 VEADVHVVGVSSLAGGHLTLVPALRKELDKL-------GRPDILITVGGVIPEQDFDELRKDGA-VEIYTPGTVIPE 712 (727)
T ss_dssp HHTTCSEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTSEEEEEESCCGGGHHHHHHTTE-EEEECTTCCHHH
T ss_pred HHcCCCEEEEeeecHhHHHHHHHHHHHHHhc-------CCCCCEEEEcCCCccccHHHHHhCCC-CEEEcCCccHHH
Confidence 3445566666443344455677788888886 78788999988443334455666664 236778887654
No 149
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=25.30 E-value=3.8e+02 Score=24.27 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=32.6
Q ss_pred CeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCcccccCCCCc
Q 024420 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQAA 98 (268)
Q Consensus 57 ~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~ 98 (268)
++.|+++||+. ...|...+..| .++-+|||.+..+...|.
T Consensus 223 ~ipvIa~GGI~~g~di~kAlalG--A~~V~vG~~fl~~~Es~~ 263 (351)
T 2c6q_A 223 KGHIISDGGCSCPGDVAKAFGAG--ADFVMLGGMLAGHSESGG 263 (351)
T ss_dssp TCEEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSCS
T ss_pred CCcEEEeCCCCCHHHHHHHHHcC--CCceeccHHHhcCccCcc
Confidence 47899999986 88898888888 578899999988665554
No 150
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=25.28 E-value=1.6e+02 Score=23.90 Aligned_cols=38 Identities=5% Similarity=0.007 Sum_probs=21.2
Q ss_pred HHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHH
Q 024420 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFR 44 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld 44 (268)
|.-.++..|++.|+.+....+=.-|...+...+++.++
T Consensus 29 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~ 66 (172)
T 1mkz_A 29 SGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIA 66 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHh
Confidence 55556667777776654433333355555555555554
No 151
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=25.24 E-value=2.7e+02 Score=22.63 Aligned_cols=75 Identities=13% Similarity=0.199 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhhcCCCccEEe-eCCC--ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHhhcCCcc
Q 024420 6 PNFCAVALALNDLGYKAVGIR-LDSG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEV 81 (268)
Q Consensus 6 ~nai~Va~~L~~~G~~l~GVR-lDSG--Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld-e~~I~~l~~~g~~i 81 (268)
.+.+++++++.+.|....-|+ .|.. ........++++-++ .++.|++++++. .+.++++.+.| .
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~----------~~ipvi~~g~i~~~~~~~~~~~~G--a 100 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEA----------VSIPVLVGGGVRSLEDATTLFRAG--A 100 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHH----------CSSCEEEESSCCSHHHHHHHHHHT--C
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHh----------cCCCEEEECCCCCHHHHHHHHHcC--C
Confidence 367889999998898755554 2221 111222223332222 245678887765 67788888877 6
Q ss_pred cEEeecCcccc
Q 024420 82 DAFGIGTYLVT 92 (268)
Q Consensus 82 d~fGVGT~Lvt 92 (268)
|...+|+.+..
T Consensus 101 d~V~i~~~~~~ 111 (253)
T 1h5y_A 101 DKVSVNTAAVR 111 (253)
T ss_dssp SEEEESHHHHH
T ss_pred CEEEEChHHhh
Confidence 77778887764
No 152
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=25.00 E-value=91 Score=26.11 Aligned_cols=36 Identities=14% Similarity=0.024 Sum_probs=29.6
Q ss_pred CeEEEEeCCCC-HHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++.++++||+. .+.+.++.+.| .|+.=||+.+....
T Consensus 196 ~ipvia~GGI~~~~d~~~~~~~G--adgv~vgsal~~~~ 232 (252)
T 1ka9_F 196 GVPVIASGGAGRMEHFLEAFQAG--AEAALAASVFHFGE 232 (252)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTTS
T ss_pred CCCEEEeCCCCCHHHHHHHHHCC--CHHHHHHHHHHcCC
Confidence 45899999999 58999988765 68888999998753
No 153
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=24.28 E-value=2.6e+02 Score=23.20 Aligned_cols=62 Identities=3% Similarity=0.054 Sum_probs=35.2
Q ss_pred HHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEe
Q 024420 14 ALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFG 85 (268)
Q Consensus 14 ~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fG 85 (268)
++++.|+.+. +-...+|.......++.+... +. +.-|+.+.+.+...+..+.+.|.|+..++
T Consensus 41 ~a~~~g~~~~-~~~~~~~~~~~~~~~~~l~~~--------~v-dgiIi~~~~~~~~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 41 IATMYKYNII-LSNSDQNMEKELHLLNTMLGK--------QV-DGIVFMGGNITDEHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp HHHHTTCEEE-EEECTTCHHHHHHHHHHHHHT--------TC-SEEEECCSCCCHHHHHHHHHSSSCEEEES
T ss_pred HHHHcCCEEE-EEeCCCCHHHHHHHHHHHHhC--------CC-CEEEEecCCCCHHHHHHHHhcCCCEEEEc
Confidence 4556788764 333334654444334443322 22 32455555677778888887787876664
No 154
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=24.16 E-value=86 Score=28.02 Aligned_cols=56 Identities=13% Similarity=0.158 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|+.|.+. ++-.--.+++|+..|+.++.-+.+|..+ ..+|++.||+.-..
T Consensus 181 qevh~~IR~~l~~~---~~~~va~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 236 (259)
T 2i9e_A 181 QDVHKALRQWICEN---IDAKVGNSIRIQYGGSVTAANCKELASQ-PDIDGFLVGGASLK 236 (259)
T ss_dssp HHHHHHHHHHHHHH---TCHHHHHHCEEEECSCCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHHHh---cChhhcccccEEEcCCCCHhhHHHHhcC-CCCCeeeechHhhC
Confidence 34455577777663 1100013589999999999999999865 46999999998765
No 155
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=24.10 E-value=57 Score=29.15 Aligned_cols=56 Identities=18% Similarity=0.216 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+....+|+.|.+. ++-.--.+++|+..|+.+..-+.+|..+ ..+|++.||+.-..
T Consensus 191 ~evh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgAsL~ 246 (261)
T 1m6j_A 191 QEVHQYIRKWMTEN---ISKEVAEATRIQYGGSVNPANCNELAKK-ADIDGFLVGGASLD 246 (261)
T ss_dssp HHHHHHHHHHHHHH---TCHHHHHHSCEEECSCCCTTTHHHHHTS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHHHh---hChhhcccccEEEcCCcCHhhHHHHhcC-CCCCeeEecHHHhC
Confidence 34444577777653 1100013589999999999999999865 46999999987654
No 156
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=24.07 E-value=2.8e+02 Score=22.27 Aligned_cols=68 Identities=19% Similarity=0.070 Sum_probs=44.7
Q ss_pred chHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCccc
Q 024420 4 GVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVD 82 (268)
Q Consensus 4 Gv~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id 82 (268)
-..++.++++++.+.|..+.-|=..+.+.....+++|+.+. .++.|-++.-.|.+.+....+.|+...
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~-----------~~~~ig~~~v~~~~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE-----------KGAIIGAGTVTSVEQCRKAVESGAEFI 87 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH-----------TTCEEEEESCCSHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC-----------CCcEEEecccCCHHHHHHHHHcCCCEE
Confidence 35678899999988888776664455554444455555442 234566666678888888888886543
No 157
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=23.74 E-value=2.7e+02 Score=24.53 Aligned_cols=72 Identities=17% Similarity=0.311 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhhcCCCccEEeeCCCC-hHHH--HHHHHHHHHHHhHhhCCCCCCCeEEEEe-CCCCHHHHHHHhhcCCcc
Q 024420 6 PNFCAVALALNDLGYKAVGIRLDSGD-LAYL--SCEARKFFRTIEKEFGVPDFEKMSITAS-NDLNEETLDALNKQGHEV 81 (268)
Q Consensus 6 ~nai~Va~~L~~~G~~l~GVRlDSGD-l~~l--s~~~R~~ld~~~~~l~~~G~~~vkIi~S-~~Lde~~I~~l~~~g~~i 81 (268)
...++.++++.+.|.+ .|-+=+|+ +.+. ...+.++++....+++ +.|.+| |.++++.++.|.+.| +
T Consensus 94 eei~~~~~~~~~~G~~--~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~------i~i~~s~g~~~~e~l~~L~~aG--~ 163 (350)
T 3t7v_A 94 EEIKETCKTLKGAGFH--MVDLTMGEDPYYYEDPNRFVELVQIVKEELG------LPIMISPGLMDNATLLKAREKG--A 163 (350)
T ss_dssp HHHHHHHHHHTTSCCS--EEEEEECCCHHHHHSTHHHHHHHHHHHHHHC------SCEEEECSSCCHHHHHHHHHTT--E
T ss_pred HHHHHHHHHHHHCCCC--EEEEeeCCCCccccCHHHHHHHHHHHHhhcC------ceEEEeCCCCCHHHHHHHHHcC--C
Confidence 4556667777666754 45555565 5433 2445555555543343 234555 458999999999987 4
Q ss_pred cEEeec
Q 024420 82 DAFGIG 87 (268)
Q Consensus 82 d~fGVG 87 (268)
+.+.+|
T Consensus 164 ~~i~i~ 169 (350)
T 3t7v_A 164 NFLALY 169 (350)
T ss_dssp EEEECC
T ss_pred CEEEEe
Confidence 555554
No 158
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=23.71 E-value=1.3e+02 Score=24.28 Aligned_cols=38 Identities=11% Similarity=0.025 Sum_probs=19.4
Q ss_pred HHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHH
Q 024420 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFR 44 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld 44 (268)
|.-.++..|++.|+.+....+=.-|+..+...+++.++
T Consensus 32 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~ 69 (169)
T 1y5e_A 32 SGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYH 69 (169)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHh
Confidence 44555666666666654443333444444444444443
No 159
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=23.64 E-value=1.2e+02 Score=26.71 Aligned_cols=54 Identities=13% Similarity=0.241 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCccc
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
+....+|+.|.+. ++-.--.+++|+..|+.++.-+.+|..+ ..||++=||+.=.
T Consensus 179 evh~~IR~~l~~~---~~~~va~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgASL 232 (244)
T 2v5b_A 179 EVHELLRRWVRSK---LGTDIAAQLRILYGGSVTAKNARTLYQM-RDINGFLVGGASL 232 (244)
T ss_dssp HHHHHHHHHHHHH---HCHHHHHHCEEEECSCCCHHHHHHHHTS-TTCCEEEESGGGS
T ss_pred HHHHHHHHHHHHh---cChhhcCcccEEEcCCCCHhHHHHHhcC-CCCCeeeechHHH
Confidence 4444577777653 1100013589999999999999999975 4699999997643
No 160
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=23.56 E-value=1.9e+02 Score=25.12 Aligned_cols=35 Identities=9% Similarity=0.167 Sum_probs=25.0
Q ss_pred eEEEEeCCCCHH-------HHHHHhhcCCcccEEeecCcccccC
Q 024420 58 MSITASNDLNEE-------TLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 58 vkIi~S~~Lde~-------~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+.|++|||+... .+....+.|+ ++.-+|.++..+.
T Consensus 197 ~pV~asGGi~~~~~~~~l~~i~~~~~aGA--~GvsvgraI~~~~ 238 (263)
T 1w8s_A 197 VPVLMSGGPKTKTEEDFLKQVEGVLEAGA--LGIAVGRNVWQRR 238 (263)
T ss_dssp SCEEEECCSCCSSHHHHHHHHHHHHHTTC--CEEEESHHHHTST
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHHHcCC--eEEEEehhhcCCc
Confidence 579999999633 4444447786 4888888888764
No 161
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=23.50 E-value=2e+02 Score=26.34 Aligned_cols=71 Identities=11% Similarity=0.088 Sum_probs=46.6
Q ss_pred HHHHHHHhhcCCCccEE------eeCCCChH-HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHhhcCCc
Q 024420 9 CAVALALNDLGYKAVGI------RLDSGDLA-YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHE 80 (268)
Q Consensus 9 i~Va~~L~~~G~~l~GV------RlDSGDl~-~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld-e~~I~~l~~~g~~ 80 (268)
.+.|+.+.+.|.+...| .+|+|-.. ....++++ .. + .++.|+++||+. ...+.+.+..|
T Consensus 240 ~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~---~v-------~-~~ipVia~GGI~~g~D~~kalalG-- 306 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAE---RV-------N-KRVPIVFDSGVRRGEHVAKALASG-- 306 (368)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHH---HH-------T-TSSCEEECSSCCSHHHHHHHHHTT--
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHH---Hh-------C-CCCeEEEECCCCCHHHHHHHHHcC--
Confidence 46677777888776666 36766432 22223333 22 1 257899999984 56777777788
Q ss_pred ccEEeecCcccc
Q 024420 81 VDAFGIGTYLVT 92 (268)
Q Consensus 81 id~fGVGT~Lvt 92 (268)
.|+.+||+.+..
T Consensus 307 Ad~V~iGr~~l~ 318 (368)
T 2nli_A 307 ADVVALGRPVLF 318 (368)
T ss_dssp CSEEEECHHHHH
T ss_pred CCEEEECHHHHH
Confidence 589999997764
No 162
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=23.13 E-value=3e+02 Score=22.64 Aligned_cols=72 Identities=14% Similarity=0.082 Sum_probs=46.9
Q ss_pred HHHHHHHHHhhcCCCccEEeeCC----CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHhhcCCcc
Q 024420 7 NFCAVALALNDLGYKAVGIRLDS----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEV 81 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDS----GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld-e~~I~~l~~~g~~i 81 (268)
+.+++|+++.+.|.+..-|+-.+ |.+.. ..++++-.. .++.+++.+++. ++.+..+.+.|+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~----------~~ipv~v~ggi~~~~~~~~~l~~Ga-- 97 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH--ELLAEVVGK----------LDVQVELSGGIRDDESLAAALATGC-- 97 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH--HHHHHHHHH----------CSSEEEEESSCCSHHHHHHHHHTTC--
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH--HHHHHHHHh----------cCCcEEEECCCCCHHHHHHHHHcCC--
Confidence 57788999999998877777432 23222 223333222 345788888876 567888888884
Q ss_pred cEEeecCcccc
Q 024420 82 DAFGIGTYLVT 92 (268)
Q Consensus 82 d~fGVGT~Lvt 92 (268)
|..-+|+.+..
T Consensus 98 d~V~lg~~~l~ 108 (244)
T 2y88_A 98 ARVNVGTAALE 108 (244)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEECchHhh
Confidence 56667776554
No 163
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=23.06 E-value=68 Score=25.77 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=26.7
Q ss_pred CCCCeEEEEeCCCCH------HHHHHHhhcCCcccEEeecCc
Q 024420 54 DFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTY 89 (268)
Q Consensus 54 G~~~vkIi~S~~Lde------~~I~~l~~~g~~id~fGVGT~ 89 (268)
+.+++-|++|||-+. +.++.+.+.|..+.++|||+.
T Consensus 107 ~~~~~ivllTDG~~~~~~~~~~~~~~~~~~gi~i~~igvg~~ 148 (200)
T 1v7p_C 107 SATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLGY 148 (200)
T ss_dssp TSEEEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEECHH
T ss_pred CCCeEEEEEccCCCCCcccHHHHHHHHHHCCCEEEEEEeccc
Confidence 456788999998753 346667778888888999753
No 164
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=23.04 E-value=86 Score=27.21 Aligned_cols=38 Identities=0% Similarity=-0.092 Sum_probs=30.1
Q ss_pred CCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 56 ~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++++|+..||++.....++..+ .-+|+|-||+.+....
T Consensus 175 ~~~~ilyggsV~~~n~~~~~~~-~~vDG~LVG~a~l~a~ 212 (225)
T 1hg3_A 175 PEVKVLCGAGISTGEDVKKAIE-LGTVGVLLASGVTKAK 212 (225)
T ss_dssp TTSEEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHTCS
T ss_pred CCCEEEEeCCCCcHHHHHHHHh-CCCCEEEeCHHHHCCc
Confidence 5689999999997766666643 3489999999998753
No 165
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=22.34 E-value=2.6e+02 Score=23.21 Aligned_cols=63 Identities=11% Similarity=-0.020 Sum_probs=36.3
Q ss_pred HHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC--HHHHHHHhhcCCcccEEe
Q 024420 14 ALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN--EETLDALNKQGHEVDAFG 85 (268)
Q Consensus 14 ~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld--e~~I~~l~~~g~~id~fG 85 (268)
++++.|+.+.-+-...+|.......++.++.. +. +.-|+.+.+.+ ...+..+.+.|.|+..++
T Consensus 29 ~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~--------~v-dgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 29 AAQALNVTVEYRGAAQYDIQEQITVLEQAIAK--------NP-AGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHHTCEEEEEECSSSCHHHHHHHHHHHHHH--------CC-SEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHh--------CC-CEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 34566888743233446765555555555544 33 32444444433 567888888888876654
No 166
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=22.26 E-value=72 Score=25.87 Aligned_cols=37 Identities=5% Similarity=0.071 Sum_probs=27.5
Q ss_pred CCCCCeEEEEeCCCCH------HHHHHHhhcCCcccEEeecCc
Q 024420 53 PDFEKMSITASNDLNE------ETLDALNKQGHEVDAFGIGTY 89 (268)
Q Consensus 53 ~G~~~vkIi~S~~Lde------~~I~~l~~~g~~id~fGVGT~ 89 (268)
++.+++-|++|||.+. ..++.+.+.|..+.++|||+.
T Consensus 107 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig~~ 149 (213)
T 1pt6_A 107 RGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAILGS 149 (213)
T ss_dssp TTCEEEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEECHH
T ss_pred CCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEeccc
Confidence 3566788999998753 344566677888889999975
No 167
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=22.17 E-value=2.3e+02 Score=27.04 Aligned_cols=91 Identities=16% Similarity=0.230 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhhcCCCccEEeeCC--CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccE
Q 024420 6 PNFCAVALALNDLGYKAVGIRLDS--GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDA 83 (268)
Q Consensus 6 ~nai~Va~~L~~~G~~l~GVRlDS--GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~ 83 (268)
+...+.+++|.+.|... |=+|+ |....+...+++ +.+. ++++.|++.+-.+.+.++.+.+.|+....
T Consensus 228 ~~~~~~a~~l~~aG~d~--I~id~a~g~~~~~~~~v~~-i~~~--------~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~ 296 (490)
T 4avf_A 228 ADTGERVAALVAAGVDV--VVVDTAHGHSKGVIERVRW-VKQT--------FPDVQVIGGNIATAEAAKALAEAGADAVK 296 (490)
T ss_dssp TTHHHHHHHHHHTTCSE--EEEECSCCSBHHHHHHHHH-HHHH--------CTTSEEEEEEECSHHHHHHHHHTTCSEEE
T ss_pred cchHHHHHHHhhcccce--EEecccCCcchhHHHHHHH-HHHH--------CCCceEEEeeeCcHHHHHHHHHcCCCEEE
Confidence 35667788888888664 44555 443322222222 2222 34678999889999999999999975544
Q ss_pred Eeec--Cccc----ccCCCCccceEEEEeE
Q 024420 84 FGIG--TYLV----TCYAQAALGCVFKLVE 107 (268)
Q Consensus 84 fGVG--T~Lv----t~~~~p~l~~vyKLve 107 (268)
.|+| +... +..+.|.+..++.+++
T Consensus 297 vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~ 326 (490)
T 4avf_A 297 VGIGPGSICTTRIVAGVGVPQISAIANVAA 326 (490)
T ss_dssp ECSSCSTTCHHHHHTCBCCCHHHHHHHHHH
T ss_pred ECCCCCcCCCccccCCCCccHHHHHHHHHH
Confidence 4433 3322 2344677776666665
No 168
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=22.01 E-value=1.3e+02 Score=26.12 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=30.1
Q ss_pred CCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 56 ~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
.+++|+..|+++.....++..+ .-+|+|-||+.++...
T Consensus 172 ~~~~ilyggsV~~~n~~~~~~~-~giDG~LVG~a~l~a~ 209 (226)
T 1w0m_A 172 PEVSVITGAGIESGDDVAAALR-LGTRGVLLASAAVKAK 209 (226)
T ss_dssp TTSEEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHTCS
T ss_pred CCCEEEEeCCCCcHHHHHHHHh-CCCCEEEECHHHHCCc
Confidence 5689999999997766666643 3489999999998753
No 169
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=21.84 E-value=68 Score=28.57 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
+....+|+.|.+. ++-.--++++|+..|+.+..-+.+|..+ ..||++-||+.-..
T Consensus 187 evh~~IR~~l~~~---~~~~~a~~vrIlYGGSV~~~N~~~l~~~-~diDG~LVGgASL~ 241 (255)
T 3qst_A 187 EMCKVIRDILAAK---VGADIANKVRILYGGSVKPNNCNELAAC-PDVDGFLVGGASLE 241 (255)
T ss_dssp HHHHHHHHHHHHH---HCHHHHHHCEEEECSCCCTTTHHHHHHS-TTCCEEEECGGGGS
T ss_pred HHHHHHHHHHHHh---cChhhcCcccEEEcCCcCHhHHHHHhcC-CCCCEEEeeHHHhh
Confidence 4444467777653 1100024689999999999999999865 45999999986543
No 170
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=21.31 E-value=1.3e+02 Score=21.16 Aligned_cols=54 Identities=7% Similarity=-0.076 Sum_probs=31.7
Q ss_pred hHHHHHHHHHHhhcCCCccE--------EeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCC
Q 024420 5 VPNFCAVALALNDLGYKAVG--------IRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASND 65 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~G--------VRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~ 65 (268)
-.||-++...|...|+...- ||+=.=.=..-+.+++..|.+. |++..-|..|||
T Consensus 20 ~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~~-------g~~~~iv~~~~g 81 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMA-------GHTNCIRLAAGG 81 (81)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHH-------CCSCCBCCCCCC
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHHc-------CCCcEEEeCCCC
Confidence 46888888889888876422 2221110123345566666665 777766666664
No 171
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=21.17 E-value=61 Score=29.21 Aligned_cols=55 Identities=13% Similarity=0.217 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
+....+|+.|.+. ++-.--++++|+..|+.+..-+.+|..+ ..||++-||+.-..
T Consensus 206 evh~~IR~~l~~~---~~~~~a~~vrILYGGSV~~~N~~el~~~-~diDG~LVGgASL~ 260 (271)
T 3krs_A 206 EAHAFIREYVTRM---YNPQVSSNLRIIYGGSVTPDNCNELIKC-ADIDGFLVGGASLK 260 (271)
T ss_dssp HHHHHHHHHHHHH---SCHHHHHHCCEEECSCCCTTTHHHHHHS-TTCCEEEESGGGGS
T ss_pred HHHHHHHHHHHHh---cChhhcCCccEEEcCCcCHHHHHHHhcC-CCCCEEEeeHHhhh
Confidence 4444577777663 1100014689999999999999999865 45999999987554
No 172
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=21.15 E-value=94 Score=27.99 Aligned_cols=50 Identities=14% Similarity=0.032 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYL 90 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~L 90 (268)
.+....+|+.|.+. + -.+++|+..|+.++.-+.+|..+ ..||++=||+.=
T Consensus 209 qevh~~IR~~l~~~---~----a~~~rIlYGGSV~~~N~~el~~~-~dIDG~LVGgAS 258 (272)
T 4g1k_A 209 QQVHAFLRGRLAAK---G----AGHVSLLYGGSVKADNAAELFGQ-PDIDGGLIGGAS 258 (272)
T ss_dssp HHHHHHHHHHHHHH---T----CTTSCEEECSCCCTTTHHHHHTS-TTCCEEEECGGG
T ss_pred HHHHHHHHHHHHHh---h----cCCceEEEcCCcCHhHHHHHhcC-CCCCEEEechHh
Confidence 34445577777764 2 35789999999999999999975 459999999764
No 173
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=21.10 E-value=2.5e+02 Score=23.27 Aligned_cols=72 Identities=15% Similarity=0.102 Sum_probs=47.4
Q ss_pred HHHHHHHHHhhcCCCccEEeeCC----CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC-HHHHHHHhhcCCcc
Q 024420 7 NFCAVALALNDLGYKAVGIRLDS----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN-EETLDALNKQGHEV 81 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDS----GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld-e~~I~~l~~~g~~i 81 (268)
+.+++++++.+.|.+..-|+-.+ |.+.. ..++++-.+ .++.+++.+++. ++.+..+.+.|+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~----------~~ipv~v~ggI~~~~~~~~~l~~Ga-- 98 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQA----------MDIKVELSGGIRDDDTLAAALATGC-- 98 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHH----------CSSEEEEESSCCSHHHHHHHHHTTC--
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHh----------cCCcEEEECCcCCHHHHHHHHHcCC--
Confidence 67888999999998877777532 33222 223333222 356788888876 467888888884
Q ss_pred cEEeecCcccc
Q 024420 82 DAFGIGTYLVT 92 (268)
Q Consensus 82 d~fGVGT~Lvt 92 (268)
|..-+|+.+..
T Consensus 99 d~V~lg~~~l~ 109 (244)
T 1vzw_A 99 TRVNLGTAALE 109 (244)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEECchHhh
Confidence 56667776654
No 174
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=20.93 E-value=3.4e+02 Score=22.09 Aligned_cols=60 Identities=7% Similarity=0.077 Sum_probs=31.3
Q ss_pred HhhcCCCccEEeeCC-CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhh-cCCcccEEe
Q 024420 15 LNDLGYKAVGIRLDS-GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK-QGHEVDAFG 85 (268)
Q Consensus 15 L~~~G~~l~GVRlDS-GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~-~g~~id~fG 85 (268)
+++.|+++. + .++ .|.......++.++.. + -+.-|+.+.+.+...+..+.+ .|.|+..++
T Consensus 47 ~~~~g~~~~-~-~~~~~~~~~~~~~~~~l~~~--------~-vdgii~~~~~~~~~~~~~l~~~~~iPvV~~~ 108 (296)
T 3brq_A 47 AEEKGRQLL-L-ADGKHSAEEERQAIQYLLDL--------R-CDAIMIYPRFLSVDEIDDIIDAHSQPIMVLN 108 (296)
T ss_dssp HHHTTCEEE-E-ECCTTSHHHHHHHHHHHHHT--------T-CSEEEEECSSSCHHHHHHHHHTCSSCEEEES
T ss_pred HHHCCCEEE-E-EeCCCCHHHHHHHHHHHHhc--------C-CCEEEEecCCCChHHHHHHHhcCCCCEEEEc
Confidence 445677653 2 243 4554433334443322 2 233455556667667777766 677765553
No 175
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=20.84 E-value=1.4e+02 Score=31.17 Aligned_cols=35 Identities=11% Similarity=0.164 Sum_probs=29.3
Q ss_pred CCeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccc
Q 024420 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 56 ~~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
+++.|+++||+ +.+.+.+++..| .|+..||+.+..
T Consensus 786 ~~ipvi~~GGI~s~~da~~~l~~G--a~~v~vg~~~l~ 821 (1025)
T 1gte_A 786 PGFPILATGGIDSAESGLQFLHSG--ASVLQVCSAVQN 821 (1025)
T ss_dssp TTCCEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHT
T ss_pred CCCCEEEecCcCCHHHHHHHHHcC--CCEEEEeecccc
Confidence 45789999999 888888888877 578889998875
No 176
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=20.23 E-value=1.7e+02 Score=23.52 Aligned_cols=51 Identities=10% Similarity=-0.003 Sum_probs=29.6
Q ss_pred HHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC
Q 024420 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL 66 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L 66 (268)
|.-.++..|++.|+.+....+=.-|+..+...+++.+++. -.+ -|+.|||+
T Consensus 22 n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~--------~~D-lVittGG~ 72 (164)
T 2is8_A 22 THLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADRE--------GLD-LILTNGGT 72 (164)
T ss_dssp HHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHTS--------CCS-EEEEESCC
T ss_pred hHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhcC--------CCC-EEEEcCCC
Confidence 5556777787778765544443445556666666665520 134 56677766
Done!