Query 024420
Match_columns 268
No_of_seqs 143 out of 1181
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 07:56:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024420.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024420hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2f7fa1 c.1.17.1 (A:141-485) P 100.0 5.3E-61 3.8E-65 450.8 23.2 234 2-260 99-338 (345)
2 d2i14a1 c.1.17.1 (A:111-389) N 100.0 9.7E-39 7.1E-43 290.4 14.3 172 2-232 102-278 (279)
3 d1ytda1 c.1.17.1 (A:120-389) N 100.0 1.2E-37 8.6E-42 282.8 16.1 158 17-229 107-269 (270)
4 d1ybea1 c.1.17.2 (A:168-433) N 100.0 7.3E-34 5.3E-38 257.8 7.3 118 4-133 126-256 (266)
5 d1yira1 c.1.17.2 (A:145-399) N 100.0 1.5E-31 1.1E-35 241.0 7.4 123 4-133 123-248 (255)
6 d1vlpa2 c.1.17.2 (A:150-415) N 100.0 3.1E-31 2.3E-35 240.3 4.8 129 3-136 116-261 (266)
7 d1o4ua1 c.1.17.1 (A:104-273) Q 95.2 0.012 8.9E-07 48.1 5.5 71 21-105 98-168 (170)
8 d1qpoa1 c.1.17.1 (A:117-285) Q 94.7 0.045 3.3E-06 44.4 7.8 72 20-105 98-169 (169)
9 d7reqa2 c.23.6.1 (A:561-728) M 92.0 0.15 1.1E-05 41.1 6.6 73 12-92 81-153 (168)
10 d1wa3a1 c.1.10.1 (A:2-203) KDP 74.7 0.5 3.7E-05 38.9 1.6 37 54-92 146-182 (202)
11 d1qapa1 c.1.17.1 (A:130-296) Q 69.1 3.9 0.00029 32.4 5.8 66 22-104 100-165 (167)
12 d1eepa_ c.1.5.1 (A:) Inosine m 66.8 2.4 0.00018 37.7 4.4 132 6-152 150-292 (388)
13 d2flia1 c.1.2.2 (A:3-219) D-ri 66.1 2.4 0.00018 34.6 4.0 51 34-94 153-203 (217)
14 d1z41a1 c.1.4.1 (A:2-338) NADP 65.0 5.1 0.00037 34.5 6.1 74 5-94 227-313 (337)
15 d1pvna1 c.1.5.1 (A:2-99,A:231- 60.7 2.6 0.00019 37.1 3.3 93 8-108 111-209 (362)
16 d1hg3a_ c.1.1.1 (A:) Triosepho 60.5 6 0.00043 31.8 5.4 61 24-95 151-212 (224)
17 d1yxya1 c.1.2.5 (A:4-233) Puta 60.3 2.6 0.00019 33.2 3.0 34 57-92 183-217 (230)
18 d1ccwa_ c.23.6.1 (A:) Glutamat 60.3 10 0.00075 28.5 6.5 63 20-90 55-123 (137)
19 d1wbha1 c.1.10.1 (A:1-213) KDP 59.9 2 0.00014 35.6 2.2 37 54-92 152-188 (213)
20 d1vhca_ c.1.10.1 (A:) Hypothet 58.9 2.3 0.00017 35.1 2.5 37 54-92 151-187 (212)
21 d2ftsa3 c.57.1.2 (A:499-653) G 58.9 21 0.0015 26.8 8.3 59 7-76 28-89 (155)
22 d1vyra_ c.1.4.1 (A:) Pentaeryt 58.8 6.3 0.00046 34.2 5.6 36 58-94 294-329 (363)
23 d1wbha1 c.1.10.1 (A:1-213) KDP 50.4 32 0.0023 27.8 8.4 100 6-117 27-135 (213)
24 d1zfja1 c.1.5.1 (A:2-94,A:221- 49.2 6.2 0.00045 34.8 3.9 92 7-107 107-204 (365)
25 d1y0ea_ c.1.2.5 (A:) Putative 46.6 19 0.0013 27.5 6.1 34 56-91 174-208 (222)
26 d1mxsa_ c.1.10.1 (A:) KDPG ald 44.8 35 0.0026 27.6 7.8 100 5-116 28-136 (216)
27 d1ps9a1 c.1.4.1 (A:1-330) 2,4- 44.2 9.6 0.0007 32.5 4.3 76 5-94 227-317 (330)
28 d1vhca_ c.1.10.1 (A:) Hypothet 40.0 54 0.0039 26.2 8.2 101 5-117 25-134 (212)
29 d1rpxa_ c.1.2.2 (A:) D-ribulos 39.7 12 0.00085 30.7 4.0 51 34-94 164-214 (230)
30 d1vrda1 c.1.5.1 (A:1-85,A:213- 39.7 9.8 0.00071 32.8 3.6 131 7-152 98-239 (330)
31 d1tqja_ c.1.2.2 (A:) D-ribulos 39.4 10 0.00073 30.8 3.4 51 34-94 156-206 (221)
32 d1ea0a2 c.1.4.1 (A:423-1193) A 39.2 12 0.0009 36.2 4.5 56 34-103 625-682 (771)
33 d1w0ma_ c.1.1.1 (A:) Triosepho 38.9 19 0.0014 28.8 5.1 38 56-95 172-210 (226)
34 d1gwja_ c.1.4.1 (A:) Morphinon 38.5 42 0.0031 28.7 7.8 37 57-94 296-332 (374)
35 d7reqb2 c.23.6.1 (B:476-638) M 37.7 9.3 0.00068 29.7 2.8 68 16-92 83-150 (163)
36 d1jpdx1 c.1.11.2 (X:114-321) L 37.5 17 0.0012 28.5 4.5 44 26-77 11-54 (208)
37 d1tqxa_ c.1.2.2 (A:) D-ribulos 37.1 13 0.00094 30.0 3.8 38 55-94 168-205 (221)
38 d1ofda2 c.1.4.1 (A:431-1239) A 36.6 16 0.0011 35.6 4.8 56 34-103 652-709 (809)
39 d1h1ya_ c.1.2.2 (A:) D-ribulos 34.7 13 0.00094 30.0 3.4 38 55-94 166-203 (220)
40 d1mxsa_ c.1.10.1 (A:) KDPG ald 34.2 9.8 0.00072 31.2 2.5 37 54-92 154-190 (216)
41 d1jgta1 c.26.2.1 (A:210-508) b 33.0 19 0.0014 30.1 4.2 54 34-89 12-67 (299)
42 d8abpa_ c.93.1.1 (A:) L-arabin 31.6 70 0.0051 24.8 7.5 61 15-86 27-89 (305)
43 d1gtea2 c.1.4.1 (A:533-844) Di 31.1 32 0.0024 28.2 5.5 50 33-92 239-289 (312)
44 d1xi3a_ c.1.3.1 (A:) Thiamin p 30.0 17 0.0013 28.4 3.3 38 56-95 152-189 (206)
45 d1jyea_ c.93.1.1 (A:) Lac-repr 29.8 35 0.0025 26.7 5.3 64 11-85 22-88 (271)
46 d1q45a_ c.1.4.1 (A:) 12-oxophy 29.8 10 0.00074 32.8 2.0 38 57-95 307-344 (380)
47 d1djqa1 c.1.4.1 (A:1-340) Trim 27.6 9.5 0.00069 32.5 1.4 39 56-95 290-329 (340)
48 d1n3ya_ c.62.1.1 (A:) Integrin 27.1 46 0.0034 24.7 5.3 40 52-91 100-146 (189)
49 d2btma_ c.1.1.1 (A:) Triosepho 26.8 9 0.00065 31.8 1.0 57 31-91 181-237 (251)
50 d1r0ma1 c.1.11.2 (A:133-375) N 26.4 36 0.0026 26.7 4.8 39 31-77 16-54 (243)
51 d1i1ga2 d.58.4.2 (A:62-141) Lp 26.2 14 0.001 24.4 1.9 35 198-235 35-69 (80)
52 d1jzta_ c.104.1.1 (A:) Hypothe 25.8 18 0.0013 29.5 2.8 39 8-46 71-109 (243)
53 d1i7qb_ c.23.16.1 (B:) Anthran 24.7 81 0.0059 23.8 6.5 68 11-92 16-90 (192)
54 d1miob_ c.92.2.3 (B:) Nitrogen 24.1 1.1E+02 0.0082 26.3 8.2 72 4-85 319-390 (457)
55 d1sb8a_ c.2.1.2 (A:) UDP-N-ace 23.9 29 0.0021 28.1 3.7 60 10-77 31-91 (341)
56 d1vc4a_ c.1.2.4 (A:) Indole-3- 23.1 44 0.0032 27.7 4.8 66 18-95 173-244 (254)
57 d1ijba_ c.62.1.1 (A:) von Will 22.9 40 0.0029 25.6 4.3 39 52-90 112-158 (202)
58 d2d59a1 c.2.1.8 (A:4-142) Hypo 22.8 1E+02 0.0076 22.5 6.6 66 9-79 36-122 (139)
59 d1sjda1 c.1.11.2 (A:126-367) N 22.8 53 0.0038 25.6 5.1 39 31-77 16-54 (242)
60 d1wa3a1 c.1.10.1 (A:2-203) KDP 22.6 1.1E+02 0.0079 24.0 7.1 65 5-80 20-84 (202)
61 d1v7pc_ c.62.1.1 (C:) Integrin 22.4 41 0.003 25.1 4.2 40 52-91 100-145 (193)
62 d1wufa1 c.1.11.2 (A:1127-1370) 21.4 59 0.0043 25.4 5.1 39 31-77 16-54 (244)
63 d1wuea1 c.1.11.2 (A:1127-1367) 20.3 63 0.0046 25.0 5.1 39 31-77 16-54 (241)
No 1
>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]}
Probab=100.00 E-value=5.3e-61 Score=450.81 Aligned_cols=234 Identities=35% Similarity=0.533 Sum_probs=221.2
Q ss_pred cCchHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcc
Q 024420 2 RSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEV 81 (268)
Q Consensus 2 ~sGv~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~i 81 (268)
++|++||++|+++|.+. .++.|||+|||||.++++++|++||++ |+++++|++||||||++|.+|.+++++|
T Consensus 99 ~~~~~~a~~~~~~l~~~-~~~~gvR~DSGd~~~~~~~vr~~ld~~-------g~~~v~Ii~Sdglde~~I~~l~~~~~~i 170 (345)
T d2f7fa1 99 KAGVPSAIRVAREMGDK-INFLGVRIDSGDMAYISKRVREQLDEA-------GFTEAKIYASNDLDENTILNLKMQKSKI 170 (345)
T ss_dssp TTHHHHHHHHHHHHGGG-SEEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTCEEEECSSCCHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhhc-ccccCCCCCCCchHHHHHHHHHHhccc-------cCCceEEEEeCCCCHHHHHHHHHcCCce
Confidence 57999999999999764 567899999999999999999999997 9999999999999999999999999999
Q ss_pred cEEeecCcccccCCCCccceEEEEeEECC-----ccccccCCCCCCCCCCccceeeeeccC-CCCeeeeEEecCCCCCCC
Q 024420 82 DAFGIGTYLVTCYAQAALGCVFKLVEINK-----QPRIKLSEDVSKVSIPCKKRSYRLYGK-EGYPLVDIMTGENEPPPK 155 (268)
Q Consensus 82 d~fGVGT~Lvt~~~~p~l~~vyKLve~~g-----~P~~K~S~~~~K~t~PG~K~vyR~~~~-~g~~~~D~i~l~~e~~~~ 155 (268)
|+|||||+|+|+.++|+++||||||+++| .|++|+|++++|.|+||+|+|||+|+. +|.+..|+|++.+|. +.
T Consensus 171 d~FGvGt~L~~~~~~p~l~~v~Klv~i~g~~g~~~p~~K~s~~~~K~t~pG~K~v~R~~~~~~~~~~~D~i~l~~e~-~~ 249 (345)
T d2f7fa1 171 DVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNED-PR 249 (345)
T ss_dssp CEEEECHHHHTTTTSCCCCCEEEEEEEECTTSSEEECCCCCSSTTSSCCCSCEEEEEEEETTTCCEEEEEEEETTCC-GG
T ss_pred eEeecCcceeecCCCCcccchhcceeecCCCCceeeeeeecCCCCCcCCCCCeeEEEEecCCCCeeEeEEEeecCCC-CC
Confidence 99999999999999999999999999987 499999999999999999999999975 478889999999996 55
Q ss_pred CCCceeecCCCCccccccccCccccccceeeecCCCCCCCccccccccccccccCCCCcHHHHHHHHHHHHhcCChhhhh
Q 024420 156 VGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMR 235 (268)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~i~~~~~e~LL~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~sL~~iR~~~~~~l~~l~~~~~r 235 (268)
.++++.|+||.++++++.+.+...++||+||| .+| +++.+.|||++||+|+++||++||++++|
T Consensus 250 ~~~~~~~~~p~~~~~~~~~~~~~~~~LL~~v~--~~G--------------k~v~~~~sl~eiR~r~~~~l~~l~~~~~r 313 (345)
T d2f7fa1 250 QEEEIYMFHPVHTFINKYVRDFEARPVLQDIF--VEG--------------KRVYELPTLDEIKQYAKENLDSLHEEYKR 313 (345)
T ss_dssp GCSEEEEECSSSTTSEEEEESEEEEECCEEEE--ETT--------------EECCCCCCHHHHHHHHHHHHHHSCHHHHC
T ss_pred cCcceeeecCccchhheeccCcchhhhhhHHh--cCC--------------EEeCCCCCHHHHHHHHHHHHHhCCHHHhc
Confidence 68889999999999999999999999999999 578 99999999999999999999999999999
Q ss_pred ccCCcccccccCHHHHHHHHHHHHc
Q 024420 236 RLNPTPYKVSVSAKLYDFIHFLWLN 260 (268)
Q Consensus 236 ~~~p~~Y~V~ls~~L~~l~~~L~~~ 260 (268)
+.||++|||++|++|++++++|+.+
T Consensus 314 l~nP~~Y~V~ls~~L~~~~~~l~~~ 338 (345)
T d2f7fa1 314 DLNPQKYPVDLSTDCWNHKMNLLEK 338 (345)
T ss_dssp SSSCCCCCEEECHHHHHHHHHHHHH
T ss_pred ccCCcCCeeccCHHHHHHHHHHHHH
Confidence 9999999999999999999999874
No 2
>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=9.7e-39 Score=290.42 Aligned_cols=172 Identities=24% Similarity=0.331 Sum_probs=147.9
Q ss_pred cCchHHHHHHHHHHhhcCCCccEEeeCCC-----ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhh
Q 024420 2 RSGVPNFCAVALALNDLGYKAVGIRLDSG-----DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK 76 (268)
Q Consensus 2 ~sGv~nai~Va~~L~~~G~~l~GVRlDSG-----Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~ 76 (268)
..++++++.+++++ |.++.|||+||| ||+++++++|++||++ |+++++|++||||||+.|++|.+
T Consensus 102 ~~~~~~~~~~~~~~---~~~~~gvRlDSg~p~~gdl~~l~~~~r~~ld~~-------G~~~v~IiaSgglde~~I~~l~~ 171 (279)
T d2i14a1 102 YDEKVEAVMAAEAL---GKKLFAVRLDTPSSRRGNFRKIIEEVRWELKVR-------GYDWVKIFVSGGLDEEKIKEIVD 171 (279)
T ss_dssp BCHHHHHHHHHTTT---GGGCCEEEECCCTTTCSCHHHHHHHHHHHHHHT-------TCCSCEEEEESSCCHHHHHTTGG
T ss_pred hhhHHHHHHHHHHh---chhhccccccccCcchhhHHHHHHHHHHHhhhc-------CCCceEEEEeCCCCHHHHHHHHh
Confidence 35778888877654 678899999995 8999999999999997 99999999999999999999975
Q ss_pred cCCcccEEeecCcccccCCCCccceEEEEeEECCccccccCCCCCCCCCCccceeeeeccCCCCeeeeEEecCCCCCCCC
Q 024420 77 QGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKV 156 (268)
Q Consensus 77 ~g~~id~fGVGT~Lvt~~~~p~l~~vyKLve~~g~P~~K~S~~~~K~t~PG~K~vyR~~~~~g~~~~D~i~l~~e~~~~~ 156 (268)
+||+|||||+|+| .|+++|+||+|+++|+|++|.| ++||+|||||+++.++.+..|..++..++
T Consensus 172 ---~iD~fGvGt~l~t---~~~l~~~~klve~~g~p~~K~~------~~pG~K~v~R~~~~~~~~~~~~~~~~~~~---- 235 (279)
T d2i14a1 172 ---VVDAFGVGGAIAS---AKPVDFALDIVEVEGKPIAKRG------KLSGRKQVYRCENGHYHVVPANKKLERCP---- 235 (279)
T ss_dssp ---GCSEEEECHHHHT---CCCCCCEEEEEEETTEECCCTT------SCCSCEEEEEETTSCEEEEETTSCCCBCS----
T ss_pred ---cccEecccccccc---CCCcceeeeEeeECCeEecccc------CCCCCceEEEEeCCCceEecCcccccccC----
Confidence 5999999999998 4899999999999999999986 47899999999987676654544443322
Q ss_pred CCceeecCCCCccccccccCccccccceeeecCCCCCCCccccccccccccccCCCCcHHHHHHHHHHHHhcCChh
Q 024420 157 GERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPD 232 (268)
Q Consensus 157 ~~~~~~~~p~~~~~~~~i~~~~~e~LL~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~sL~~iR~~~~~~l~~l~~~ 232 (268)
+.+...++||+||| .+| +++++.|||++||+|+++||++||++
T Consensus 236 -----------------~~~~~~~~LL~~v~--~~G--------------~~~~~~~sl~eiR~~~~~~l~~l~~~ 278 (279)
T d2i14a1 236 -----------------VCNAKVEPLLKPII--ENG--------------EIVVEFPKAREIREYVLEQAKKFNLE 278 (279)
T ss_dssp -----------------SSCCBEEECCEEEE--BTT--------------BCCCCCCCHHHHHHHHHHHHHHTTCC
T ss_pred -----------------CCCCccccCcchHH--hCC--------------EEeCCCCCHHHHHHHHHHHHHhCCcc
Confidence 22446789999999 578 99999999999999999999999886
No 3
>d1ytda1 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltransferase Ta1145 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=100.00 E-value=1.2e-37 Score=282.84 Aligned_cols=158 Identities=27% Similarity=0.381 Sum_probs=132.5
Q ss_pred hcCCCccEEeeCC-----CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCccc
Q 024420 17 DLGYKAVGIRLDS-----GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 17 ~~G~~l~GVRlDS-----GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
+.+.++.|||+|| |||+++++++|++||++ |+++++|++||||||++|.+|.++ ++|+|||||+|+
T Consensus 107 ~~~~~~~gvR~ds~r~dsGd~~~l~~~~r~~Ld~~-------G~~~vkIi~S~glde~~I~~l~~~--~~d~fGvGt~Lv 177 (270)
T d1ytda1 107 EMFDKVDYIRLDTPSSRRGNFEALIREVRWELALR-------GRSDIKIMVSGGLDENTVKKLREA--GAEAFGVGTSIS 177 (270)
T ss_dssp TTCSCCCEEEECCCGGGCSCHHHHHHHHHHHHHHT-------TCTTSEEEEESSCCHHHHHHHHHH--TCCEEEECHHHH
T ss_pred HHHHHhCCccCCCcCCCCCCHHHHHHHHHHhcCcc-------CCCcceEEECCCCCHHHHHHHHhc--CCceEeeccccc
Confidence 3455666777777 99999999999999997 999999999999999999999876 489999999998
Q ss_pred ccCCCCccceEEEEeEECCccccccCCCCCCCCCCccceeeeeccCCCCeeeeEEecCCCCCCCCCCceeecCCCCcccc
Q 024420 92 TCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKR 171 (268)
Q Consensus 92 t~~~~p~l~~vyKLve~~g~P~~K~S~~~~K~t~PG~K~vyR~~~~~g~~~~D~i~l~~e~~~~~~~~~~~~~p~~~~~~ 171 (268)
|+ |+++||||||+++|+|++|.| ++||+|||||+|+.++.. .|.+.. ++.
T Consensus 178 t~---~~l~~v~Klvei~G~p~~K~~------~~pG~K~v~R~~~~~~~~-~~~~~~--------------------~~~ 227 (270)
T d1ytda1 178 SA---KPFDFAMDIVEVNGKPETKRG------KMSGRKNVLRCTSCHRIE-VVPANV--------------------QEK 227 (270)
T ss_dssp TC---CCCCEEEEEEEETTEECCCTT------SCCSCEEEEEETTTCCEE-EEETTC--------------------CCE
T ss_pred cC---CCCCeEEEeeecCCeeccccc------CCCCcceEEEEecCCceE-Eecccc--------------------ccc
Confidence 84 899999999999999999964 578999999999755543 332221 122
Q ss_pred ccccCccccccceeeecCCCCCCCccccccccccccccCCCCcHHHHHHHHHHHHhcC
Q 024420 172 AYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQM 229 (268)
Q Consensus 172 ~~i~~~~~e~LL~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~sL~~iR~~~~~~l~~l 229 (268)
..+.+...++||+||| .+| +++++.|||++||+|+++||++|
T Consensus 228 ~~~~~~~~~~LL~~v~--~~G--------------k~v~~~~sl~eiR~~~~~~L~~l 269 (270)
T d1ytda1 228 TCICGGSMQNLLVKYL--SHG--------------KRTSEYPRPKEIRSRSMKELEYF 269 (270)
T ss_dssp ECSSSSEEEECCEEEE--ETT--------------EESSCCCCHHHHHHHHHHHHGGG
T ss_pred ccCCCCccccccchHH--hCC--------------EEcCCCCCHHHHHHHHHHHHHhc
Confidence 2234456789999999 579 99999899999999999999987
No 4
>d1ybea1 c.1.17.2 (A:168-433) Nicotinate phosphoribosyltransferase, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.98 E-value=7.3e-34 Score=257.76 Aligned_cols=118 Identities=21% Similarity=0.247 Sum_probs=101.9
Q ss_pred chHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCC--CeEEEEeCCCCHHHHHHHhh--cCC
Q 024420 4 GVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFE--KMSITASNDLNEETLDALNK--QGH 79 (268)
Q Consensus 4 Gv~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~--~vkIi~S~~Lde~~I~~l~~--~g~ 79 (268)
|++||++++.+ .+.++.|||+|||||++||+++|++||++ |+. ..+||+||||||++|.+|.+ +|+
T Consensus 126 ~~~~~~~~~~~---~~~~~~GVRlDSGDl~~ls~~~r~~ld~~-------G~~p~~~~Iv~S~~LDe~~i~~l~~~~~g~ 195 (266)
T d1ybea1 126 GTAAFLRNAPE---WVADWTGFRPDSAPPIEGGEKIIEWWRKM-------GRDPRTKMLIFSDGLDVDAIVDTYRHFEGR 195 (266)
T ss_dssp CHHHHHHTCCG---GGGGSSEECCCSSCHHHHHHHHHHHHHHT-------TCCGGGSEEEECTTCCHHHHHHHHHHHTTT
T ss_pred cHHHHHHHHHH---hhccccceeeCCCChHHHHHHHHHHHHHc-------CCCCCCcEEEEECCCCHHHHHHHHHHhccC
Confidence 78999998754 46778999999999999999999999997 654 35799999999999999986 589
Q ss_pred cccEEeecCccc---------ccCCCCccceEEEEeEECCccccccCCCCCCCCCCccceeee
Q 024420 80 EVDAFGIGTYLV---------TCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYR 133 (268)
Q Consensus 80 ~id~fGVGT~Lv---------t~~~~p~l~~vyKLve~~g~P~~K~S~~~~K~t~PG~K~vyR 133 (268)
++|+|||||+|+ ||.++|+++||||||+++|+|++|+|++++|.|.| |+.||
T Consensus 196 ~~d~fGVGT~L~~~~~~~~~~t~~~~p~l~~VyKLve~~g~P~~KlSd~~~K~tg~--~~~~~ 256 (266)
T d1ybea1 196 VRMSFGWGTNLTNDFAGCAPKTIASLKPISIVCKVSDANGRPAVKLSDNPQKATGD--PAEVE 256 (266)
T ss_dssp SEEEEEECHHHHCCCTTCCC-----CCCCCEEEEEEEETTEECCBCCSSGGGCBSC--HHHHH
T ss_pred cceeeeccceeecccCCCCccccccCCCcceEEEeeeeCCeeeeEecCCCccccCC--HHHHH
Confidence 999999999999 56778999999999999999999999999999965 44443
No 5
>d1yira1 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltransferase, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.97 E-value=1.5e-31 Score=241.03 Aligned_cols=123 Identities=20% Similarity=0.192 Sum_probs=94.2
Q ss_pred chHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhh--cCCcc
Q 024420 4 GVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNK--QGHEV 81 (268)
Q Consensus 4 Gv~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~--~g~~i 81 (268)
|..++++.+. ...+..+.|||+|||||+++++++|++|+++ ++++..+ .||+||++|+++|.++++ .++++
T Consensus 123 ~~~~~l~~~~--~~~~~~~~GVRlDSGD~~~~~~~~~~~l~~~----g~~~~~k-~iI~sdgl~~e~i~~~l~~~~~~~~ 195 (255)
T d1yira1 123 TTDAFLRDFD--LYFAKLFDGLRHDSGDPLLWAEKTIAHYLKL----GIDPLTK-TLVFSDGLDLPRALKIYRALQGRIN 195 (255)
T ss_dssp CHHHHHHHCC--HHHHHHCCEEEECSSCHHHHHHHHHHHHHHH----TCCGGGS-EEEECSSCCHHHHHHHHHHHTTTSE
T ss_pred hHHHHHHHHH--HHhccccCceecCCcchhhHHHHHHHHHHHc----CCCCcce-EEEEcCCCCHHHHHHHHHHccCCcc
Confidence 4566655543 3335567899999999999999999999997 2222233 588899999999988875 35688
Q ss_pred cEEeecCccccc-CCCCccceEEEEeEECCccccccCCCCCCCCCCccceeee
Q 024420 82 DAFGIGTYLVTC-YAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYR 133 (268)
Q Consensus 82 d~fGVGT~Lvt~-~~~p~l~~vyKLve~~g~P~~K~S~~~~K~t~PG~K~vyR 133 (268)
|+|||||+|+|+ .++|+|+|||||||++|+|++|+|++++|.|.|+.+.++|
T Consensus 196 ~~FGVGT~L~t~~~~~p~l~~VyKLve~~g~P~~KlS~~pgK~t~p~~~~~~~ 248 (255)
T d1yira1 196 VSFGIGTHFTCDLPGVEPMNIVVKMSACNGHPVAKISDTPGKAQCRDPDFIHY 248 (255)
T ss_dssp EEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSCC-------CHHHHH
T ss_pred eeeccCceeeecCCCCCCccEEEEEEEECCEeeeeecCCCccccCCcHHHHHH
Confidence 999999999996 5789999999999999999999999999999999755544
No 6
>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=3.1e-31 Score=240.29 Aligned_cols=129 Identities=26% Similarity=0.334 Sum_probs=101.9
Q ss_pred CchHHHHHHHHHHhhc------CCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHH---HH
Q 024420 3 SGVPNFCAVALALNDL------GYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETL---DA 73 (268)
Q Consensus 3 sGv~nai~Va~~L~~~------G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I---~~ 73 (268)
+||+++..++.++... +.++.|||||||||+++++++|++|++. +..+|++++ ||+|+++|++.+ .+
T Consensus 116 ~~I~l~Dt~~~~~~~~~~~~~~~~~~~GVRlDSGDl~~~~~~~r~~~~~~---~~~~~~~k~-iI~ss~~~~E~~i~i~~ 191 (266)
T d1vlpa2 116 AGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHDV---LKLPKFSKI-ICYSDSLNVEKAITYSH 191 (266)
T ss_dssp CCEEECCTTCHHHHHTTCCTTHHHHSCEEEECSSCHHHHHHHHHHHHHTT---SCCCTTSSE-EEECSSCCHHHHHHHHH
T ss_pred ccccchhHHhHHHHHHHHHHHhhhhccccccCCcCHHHHHHHHHHHHHHh---cCCCCCCcE-EEEcCCCcHHHHHHHHH
Confidence 4555555554443222 3356799999999999999999999986 666788996 555666665554 35
Q ss_pred HhhcCCcccEEeecCcccccCC--------CCccceEEEEeEECCccccccCCCCCCCCCCccceeeeecc
Q 024420 74 LNKQGHEVDAFGIGTYLVTCYA--------QAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYG 136 (268)
Q Consensus 74 l~~~g~~id~fGVGT~Lvt~~~--------~p~l~~vyKLve~~g~P~~K~S~~~~K~t~PG~K~vyR~~~ 136 (268)
+..+|++||+|||||+|+||.+ .|+|+|||||||++|+|++|+|++++|.|.| .++|+|+-.
T Consensus 192 ~~~~ga~id~fGVGT~Lvt~~~~~s~~~~~~p~l~~VyKLve~~G~P~~KlSd~~~K~T~~-~~~v~r~k~ 261 (266)
T d1vlpa2 192 AAKENGMLATFGIGTNFTNDFRKKSEPQVKSEPLNIVIKLLEVNGNHAIKISDNLGKNMGD-PATVKRVKE 261 (266)
T ss_dssp HHHHTTCEEEEEECHHHHSCEECSSSTTSEECCCCEEEEEEEETTEECCBCCSSTTCCBSC-HHHHHHHHH
T ss_pred HHHcCCccccccccceeeecCccccccccCCCcccEEEEEEEECCeeeeEecCCCCcccCC-HHHHHHHHH
Confidence 5568999999999999999754 4889999999999999999999999999976 888888643
No 7
>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.17 E-value=0.012 Score=48.06 Aligned_cols=71 Identities=14% Similarity=0.142 Sum_probs=54.6
Q ss_pred CccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccc
Q 024420 21 KAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALG 100 (268)
Q Consensus 21 ~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~ 100 (268)
....|-+|-.+|..+ +++.+.+++. .+++.|-+|||+|++.|.++...| +|..-+| +++++ .|++|
T Consensus 98 g~d~i~LDn~~pe~~-k~~~~~lk~~--------~~~i~lEaSGGI~~~ni~~~a~~G--VD~Is~g-~lt~~--a~~~D 163 (170)
T d1o4ua1 98 GADIVMLDNLSPEEV-KDISRRIKDI--------NPNVIVEVSGGITEENVSLYDFET--VDVISSS-RLTLQ--EVFVD 163 (170)
T ss_dssp TCSEEEEESCCHHHH-HHHHHHHHHH--------CTTSEEEEEECCCTTTGGGGCCTT--CCEEEEG-GGTSS--CCCCC
T ss_pred CccEEEEcCcChhhH-hHHHHHHHhh--------CCcEEEEEECCCCHHHHHHHHHcC--CCEEEcC-ccccC--CCCcc
Confidence 356899999988655 4566666664 377999999999999999998766 6777777 45443 78899
Q ss_pred eEEEE
Q 024420 101 CVFKL 105 (268)
Q Consensus 101 ~vyKL 105 (268)
+.+++
T Consensus 164 isl~i 168 (170)
T d1o4ua1 164 LSLEI 168 (170)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 98876
No 8
>d1qpoa1 c.1.17.1 (A:117-285) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.72 E-value=0.045 Score=44.42 Aligned_cols=72 Identities=18% Similarity=0.136 Sum_probs=54.3
Q ss_pred CCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCcc
Q 024420 20 YKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAAL 99 (268)
Q Consensus 20 ~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l 99 (268)
.....|-+|--+|..+..-+ ++++.. .+++.|-+|||+|++.|.++...| +|..-+| .++.+ .|++
T Consensus 98 ~~~diImLDN~sp~~~k~~v-~~~~~~--------~~~i~lEaSGgI~~~ni~~ya~~G--vD~IS~g-alt~s--a~~l 163 (169)
T d1qpoa1 98 EKPELILLDNFAVWQTQTAV-QRRDSR--------APTVMLESSGGLSLQTAATYAETG--VDYLAVG-ALTHS--VRVL 163 (169)
T ss_dssp GCCSEEEEETCCHHHHHHHH-HHHHHH--------CTTCEEEEESSCCTTTHHHHHHTT--CSEEECG-GGTSS--BCCC
T ss_pred cCCcEEEecCcChHhHHHHH-HHhhcc--------CCeeEEEEeCCCCHHHHHHHHHcC--CCEEECC-ccccC--CCcc
Confidence 34568999999987665444 455552 477899999999999999999887 6777777 45443 6788
Q ss_pred ceEEEE
Q 024420 100 GCVFKL 105 (268)
Q Consensus 100 ~~vyKL 105 (268)
|+.+++
T Consensus 164 Disl~I 169 (169)
T d1qpoa1 164 DIGLDM 169 (169)
T ss_dssp CEEEEC
T ss_pred CeeeeC
Confidence 988764
No 9
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=92.04 E-value=0.15 Score=41.14 Aligned_cols=73 Identities=22% Similarity=0.252 Sum_probs=57.9
Q ss_pred HHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCccc
Q 024420 12 ALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 12 a~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
+.+..+.+..+.|+=.=+|.-..+..++.+.|+++ |.+++.|++.|-+-++...+|.+.|+. ..||=||++.
T Consensus 81 v~aa~~~~advI~iSs~~~~~~~~~~~l~~~L~~~-------g~~~v~VivGG~ip~~d~~~l~~~Gv~-~iF~pgt~~~ 152 (168)
T d7reqa2 81 ARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKL-------GRPDILITVGGVIPEQDFDELRKDGAV-EIYTPGTVIP 152 (168)
T ss_dssp HHHHHHHTCSEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTSEEEEEESCCGGGHHHHHHHTEE-EEECTTCCHH
T ss_pred HHHHHccCCCEEEEecCcccchHHHHHHHHHHHhc-------CCCCeEEEEeCCCCHHHHHHHHhCCCC-EEECcCCCHH
Confidence 33334456677777766777778889999999997 889999999998888888999988864 5899999875
Q ss_pred c
Q 024420 92 T 92 (268)
Q Consensus 92 t 92 (268)
.
T Consensus 153 e 153 (168)
T d7reqa2 153 E 153 (168)
T ss_dssp H
T ss_pred H
Confidence 3
No 10
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=74.74 E-value=0.5 Score=38.90 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=33.5
Q ss_pred CCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 54 G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.|++++++.+||+|.+.+.++.+.| ..++|+|+.|+.
T Consensus 146 p~p~i~~iptGGI~~~n~~~~l~ag--a~avg~Gs~l~~ 182 (202)
T d1wa3a1 146 PFPNVKFVPTGGVNLDNVCEWFKAG--VLAVGVGSALVK 182 (202)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHHHT--CSCEEECHHHHC
T ss_pred cccCCcEEeeCCCCHHHHHHHHHCC--CeEEEEchhhcC
Confidence 5899999999999999999999876 678899999975
No 11
>d1qapa1 c.1.17.1 (A:130-296) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=69.06 E-value=3.9 Score=32.45 Aligned_cols=66 Identities=21% Similarity=0.271 Sum_probs=45.2
Q ss_pred ccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCCCCccce
Q 024420 22 AVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGC 101 (268)
Q Consensus 22 l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~ 101 (268)
...|-+|--++..+.+.+ +.. -++++|-+|||++++.|.++...|. |..=+|. |+. +.|++|+
T Consensus 100 ~diImLDN~~pe~~~~av----~~i--------~~~~~lEaSGgI~~~ni~~ya~~GV--D~IS~ga-lt~--~a~~~Di 162 (167)
T d1qapa1 100 ADIIMLDNFNTDQMREAV----KRV--------NGQARLEVSGNVTAETLREFAETGV--DFISVGA-LTK--HVRALDL 162 (167)
T ss_dssp CSEEEESSCCHHHHHHHH----HTT--------CTTCCEEECCCSCHHHHHHHHHTTC--SEEECSH-HHH--EEECCCE
T ss_pred CcEEEecCCCHHHHHHHH----Hhc--------CCceEEEEeCCCCHHHHHHHHHcCC--CEEECCc-ccC--CCCccCc
Confidence 457899999986654433 221 1468899999999999999998874 4433432 322 2567887
Q ss_pred EEE
Q 024420 102 VFK 104 (268)
Q Consensus 102 vyK 104 (268)
.++
T Consensus 163 sl~ 165 (167)
T d1qapa1 163 SMR 165 (167)
T ss_dssp EEE
T ss_pred eee
Confidence 765
No 12
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=66.83 E-value=2.4 Score=37.68 Aligned_cols=132 Identities=17% Similarity=0.192 Sum_probs=86.0
Q ss_pred HHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEe
Q 024420 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFG 85 (268)
Q Consensus 6 ~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fG 85 (268)
++...-+.+|.+.|.++.-|..=-|.-..+...+++ +.+ -++++.|+++|=-+.+....|.+.|+...--|
T Consensus 150 ~~~~~ra~~L~~aG~D~ivID~AhG~s~~~~~~i~~-ik~--------~~~~v~vIaGNV~T~e~a~~L~~~GaD~VkVG 220 (388)
T d1eepa_ 150 IDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKK-IKT--------KYPNLDLIAGNIVTKEAALDLISVGADCLKVG 220 (388)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHH-HHH--------HCTTCEEEEEEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHHHhhccceeeeeccccchHHHHHHHHH-HHH--------HCCCCceeeccccCHHHHHHHHhcCCCeeeec
Confidence 356777888888898876665545764444333333 323 25788999999999999999999998776677
Q ss_pred ec------CcccccCCCCccceEEEEeEE-CC--ccccccCCCCCCCCCCc--cceeeeeccCCCCeeeeEEecCCCC
Q 024420 86 IG------TYLVTCYAQAALGCVFKLVEI-NK--QPRIKLSEDVSKVSIPC--KKRSYRLYGKEGYPLVDIMTGENEP 152 (268)
Q Consensus 86 VG------T~Lvt~~~~p~l~~vyKLve~-~g--~P~~K~S~~~~K~t~PG--~K~vyR~~~~~g~~~~D~i~l~~e~ 152 (268)
|| |+.++..+.|.+..++++... .+ .|++ ++ |-...|| .|.+ -.+++--+++-+++..+|.
T Consensus 221 iGpGs~CtTr~~~GvG~pq~sai~~~~~~~~~~~vpiI--AD--GGi~~~Gdi~KAl--a~GAd~VMlG~~lAg~~Es 292 (388)
T d1eepa_ 221 IGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICII--AD--GGIRFSGDVVKAI--AAGADSVMIGNLFAGTKES 292 (388)
T ss_dssp SSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEE--EE--SCCCSHHHHHHHH--HHTCSEEEECHHHHTBTTS
T ss_pred cccccccccccccccCcchHHHHHHHHHHhccCCceEE--ec--cccCcCCceeeeE--EeccceeecchhhhcccCC
Confidence 77 455667788999998877654 23 3554 44 4455555 3333 1233434444556666664
No 13
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=66.09 E-value=2.4 Score=34.62 Aligned_cols=51 Identities=18% Similarity=0.276 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
.-.+++|+++++. + .++.|.+.||++.+.+..+.+.| +|.|=+|+.+..+.
T Consensus 153 ~ki~~l~~~~~~~-------~-~~~~I~vDGGIn~~~i~~l~~aG--ad~~V~Gsaif~~~ 203 (217)
T d2flia1 153 EKVATVAKWRDEK-------G-LSFDIEVDGGVDNKTIRACYEAG--ANVFVAGSYLFKAS 203 (217)
T ss_dssp HHHHHHHHHHHHT-------T-CCCEEEEESSCCTTTHHHHHHHT--CCEEEESHHHHTSS
T ss_pred HHHHHHHHHHHhc-------C-CCeEEEEeCCCCHHHHHHHHHCC--CCEEEEchHHhCCC
Confidence 4456788888874 3 35799999999999999999988 56666788887643
No 14
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]}
Probab=64.96 E-value=5.1 Score=34.45 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHhhcCCCccEEeeCCCC------------hHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHH
Q 024420 5 VPNFCAVALALNDLGYKAVGIRLDSGD------------LAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETL 71 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRlDSGD------------l~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~I 71 (268)
...++.+++.|.+.|..+. -+.+|. ...+++++|+.. ++.++++|++ +.+.+
T Consensus 227 ~~~~~~~~~~l~~~g~d~~--~~s~g~~~~~~~~~~~~~~~~~~~~ik~~~-------------~~pvi~~G~i~~~~~a 291 (337)
T d1z41a1 227 IADHIGFAKWMKEQGVDLI--DCSSGALVHADINVFPGYQVSFAEKIREQA-------------DMATGAVGMITDGSMA 291 (337)
T ss_dssp HHHHHHHHHHHHHTTCCEE--EEECCCSSCCCCCCCTTTTHHHHHHHHHHH-------------CCEEEECSSCCSHHHH
T ss_pred hhhhHHHHHHHHHcCCccc--ccccccccccccccCCcccHHHHHHHHHhc-------------CceEEEeCCcCCHHHH
Confidence 4566777777777765542 222332 134444444432 3478899998 69999
Q ss_pred HHHhhcCCcccEEeecCcccccC
Q 024420 72 DALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 72 ~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++++++|. .|..|+|..++..+
T Consensus 292 e~~l~~g~-~D~V~~gR~~iadP 313 (337)
T d1z41a1 292 EEILQNGR-ADLIFIGRELLRDP 313 (337)
T ss_dssp HHHHHTTS-CSEEEECHHHHHCT
T ss_pred HHHHHCCC-cceehhhHHHHhCc
Confidence 99998774 78999999888743
No 15
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]}
Probab=60.66 E-value=2.6 Score=37.14 Aligned_cols=93 Identities=19% Similarity=0.174 Sum_probs=68.3
Q ss_pred HHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeec
Q 024420 8 FCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIG 87 (268)
Q Consensus 8 ai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVG 87 (268)
..+.+.+|.+.|.++.-|..-=|.-......++.+-+.. .+++.|++.|=-+.+..+.|.+.|+.+.--|||
T Consensus 111 ~~~~~~~L~~ag~d~i~IDvAhG~~~~v~~~i~~ir~~~--------~~~~~IiAGNVaT~e~~~~L~~aGaD~vkVGIG 182 (362)
T d1pvna1 111 FRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKY--------GDKVKVGAGNIVDGEGFRYLADAGADFIKIGIG 182 (362)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCCCBHHHHHHHHHHHHHH--------GGGSCEEEEEECSHHHHHHHHHHTCSEEEECSS
T ss_pred hHHHHHHHhhcCceEEeechhccchhHHHHHHHHHHHhh--------ccceeeecccccCHHHHHHHHHhCCcEEEeccc
Confidence 345667777778777565555576555544444333322 245689999999999999999999887777887
Q ss_pred ------CcccccCCCCccceEEEEeEE
Q 024420 88 ------TYLVTCYAQAALGCVFKLVEI 108 (268)
Q Consensus 88 ------T~Lvt~~~~p~l~~vyKLve~ 108 (268)
|+++|..+.|.+..++.+++.
T Consensus 183 ~Gs~CTTr~~tGvG~Pq~sAv~e~a~~ 209 (362)
T d1pvna1 183 GGSICITREQKGIGRGQATAVIDVVAE 209 (362)
T ss_dssp CSTTBCHHHHTCBCCCHHHHHHHHHHH
T ss_pred ccccccchhhhccCCchHHHHHHHHHH
Confidence 777888889999999988653
No 16
>d1hg3a_ c.1.1.1 (A:) Triosephosphate isomerase {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=60.45 E-value=6 Score=31.76 Aligned_cols=61 Identities=7% Similarity=0.154 Sum_probs=40.0
Q ss_pred EEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCH-HHHHHHhhcCCcccEEeecCcccccCC
Q 024420 24 GIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNE-ETLDALNKQGHEVDAFGIGTYLVTCYA 95 (268)
Q Consensus 24 GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde-~~I~~l~~~g~~id~fGVGT~Lvt~~~ 95 (268)
|...++.+......-++ .+.+. -++++|++.|+++. +....+...| +|++-|||..+.+.+
T Consensus 151 g~~~~~~~~~~i~~~i~-~i~~~--------~~~v~vlygGsV~~~n~~~~~~~~g--~dGvLVGsAsl~a~d 212 (224)
T d1hg3a_ 151 GIPVSKAKPEVITNTVE-LVKKV--------NPEVKVLCGAGISTGEDVKKAIELG--TVGVLLASGVTKAKD 212 (224)
T ss_dssp SCCTTTSCTHHHHHHHH-HHHHH--------CTTSEEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHTCSS
T ss_pred ccCCCchhhhhhhhhhh-hhhhh--------ccccceEEeCCcCCHHHHHHHHhCC--CCEEEEcceeecCcC
Confidence 55556666555544343 33332 25789999999985 5555555555 699999999987543
No 17
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]}
Probab=60.34 E-value=2.6 Score=33.18 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=28.9
Q ss_pred CeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccc
Q 024420 57 KMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 57 ~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
++.+++.||+ +.+.+..+.+.| .|++.|||.++.
T Consensus 183 ~ipvia~GGI~t~~d~~~al~~G--Ad~V~vGsAi~~ 217 (230)
T d1yxya1 183 GIAVIAEGKIHSPEEAKKINDLG--VAGIVVGGAITR 217 (230)
T ss_dssp TCCEEEESCCCSHHHHHHHHTTC--CSEEEECHHHHC
T ss_pred CCeEEEeCCCCCHHHHHHHHHcC--CCEEEEChhhcC
Confidence 5679999999 799999988877 678999999863
No 18
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=60.26 E-value=10 Score=28.46 Aligned_cols=63 Identities=11% Similarity=0.038 Sum_probs=40.1
Q ss_pred CCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC------CHHHHHHHhhcCCcccEEeecCcc
Q 024420 20 YKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL------NEETLDALNKQGHEVDAFGIGTYL 90 (268)
Q Consensus 20 ~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L------de~~I~~l~~~g~~id~fGVGT~L 90 (268)
.++.|+=.=++.-....+++.+.|++. +..+++|++.|.+ .++...+|.+.|+ --.||=||..
T Consensus 55 ~d~v~lS~~~~~~~~~~~~~~~~l~~~-------~~~~i~iivGG~~~~~~~~~~~~~~~l~~~Gv-~~if~~~t~~ 123 (137)
T d1ccwa_ 55 ADAILVSSLYGQGEIDCKGLRQKCDEA-------GLEGILLYVGGNIVVGKQHWPDVEKRFKDMGY-DRVYAPGTPP 123 (137)
T ss_dssp CSEEEEEECSSTHHHHHTTHHHHHHHT-------TCTTCEEEEEESCSSSSCCHHHHHHHHHHTTC-SEECCTTCCH
T ss_pred CCEEEEeeccccchHHHHHHHHHHHHh-------ccCCCEEEEeCCcCCCccccHHHHHHHHHcCC-CEEECCCCCH
Confidence 344444333344456666677778775 7778899999887 3556666767663 1257777765
No 19
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=59.93 E-value=2 Score=35.56 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=32.5
Q ss_pred CCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 54 G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.|++++++.+||++.+.+.++++.|+ ...|+|+.|+.
T Consensus 152 p~p~~~~~ptGGV~~~n~~~yl~~g~--v~~~~Gs~l~~ 188 (213)
T d1wbha1 152 PFSQVRFCPTGGISPANYRDYLALKS--VLCIGGSWLVP 188 (213)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHTSTT--BSCEEEGGGSC
T ss_pred cccCCceeeeCCCCHHHHHHHHhCCC--EEEEEChhhCC
Confidence 58999999999999999999998874 56688998875
No 20
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=58.94 E-value=2.3 Score=35.07 Aligned_cols=37 Identities=8% Similarity=0.159 Sum_probs=32.4
Q ss_pred CCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 54 G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.|++++++.+||++.+.+.++++.|+ ...|+|+.|+.
T Consensus 151 p~p~~~~~ptGGV~~~N~~~yl~~g~--v~~~~Gs~l~~ 187 (212)
T d1vhca_ 151 PYAQLQIMPTGGIGLHNIRDYLAIPN--IVACGGSWFVE 187 (212)
T ss_dssp TTTTCEEEEBSSCCTTTHHHHHTSTT--BCCEEECGGGC
T ss_pred cccCCeEEecCCCCHHHHHHHHhCCC--EEEEEChhhCC
Confidence 58999999999999999999998764 57788888875
No 21
>d2ftsa3 c.57.1.2 (A:499-653) Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=58.93 E-value=21 Score=26.76 Aligned_cols=59 Identities=12% Similarity=0.187 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC---HHHHHHHhh
Q 024420 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN---EETLDALNK 76 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld---e~~I~~l~~ 76 (268)
|..-++..|++.|++..-..+=.-|...+...+.+.+++ .+ -|+.|||.. .+.+.+..+
T Consensus 28 N~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~----------~D-liittGG~s~g~~D~~~~~l~ 89 (155)
T d2ftsa3 28 NRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISR----------AD-VIITSGGVSMGEKDYLKQVLD 89 (155)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEECSSHHHHHHHHHHHHHH----------CS-EEEEESCCSSSCCHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEEEEecCchhHHHHHHHHhhcc----------cC-EEEEeccccCCcchhhHHHHH
Confidence 666777888888888766666666777777777777765 34 577888883 355555543
No 22
>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]}
Probab=58.76 E-value=6.3 Score=34.20 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=30.6
Q ss_pred eEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 58 MSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 58 vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+.++..|.++.+.++++++.|. .|..|+|..|+..+
T Consensus 294 ~~vi~~G~~t~~~ae~~l~~G~-~DlV~~gR~liadP 329 (363)
T d1vyra_ 294 GVIIGAGAYTAEKAEDLIGKGL-IDAVAFGRDYIANP 329 (363)
T ss_dssp SEEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred ceEEecCCCCHHHHHHHHHCCC-cceehhhHHHHHCc
Confidence 4688888999999999998774 89999999998854
No 23
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=50.38 E-value=32 Score=27.80 Aligned_cols=100 Identities=15% Similarity=0.143 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCc-ccEE
Q 024420 6 PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE-VDAF 84 (268)
Q Consensus 6 ~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~-id~f 84 (268)
.+++.++++|.+.|.+..=|-++|.+ +.++.+.+.+. ++++.|=+.-=+|.+.++...+.|+. +.+=
T Consensus 27 ~~a~~~~~al~~~Gi~~iEitl~tp~----a~~~I~~l~~~--------~p~~~vGaGTV~~~~~~~~a~~aGa~FivSP 94 (213)
T d1wbha1 27 EHAVPMAKALVAGGVRVLNVTLRTEC----AVDAIRAIAKE--------VPEAIVGAGTVLNPQQLAEVTEAGAQFAISP 94 (213)
T ss_dssp GGHHHHHHHHHHTTCCEEEEESCSTT----HHHHHHHHHHH--------CTTSEEEEESCCSHHHHHHHHHHTCSCEEES
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCChh----HHHHHHHHHHH--------CCCCeeeccccccHHHHHHHHHCCCcEEECC
Confidence 45677788887778887777777766 44444444442 45666777777777777777776653 1111
Q ss_pred eecCcccc---cCCCCccceEEEEeEE-----CCccccccC
Q 024420 85 GIGTYLVT---CYAQAALGCVFKLVEI-----NKQPRIKLS 117 (268)
Q Consensus 85 GVGT~Lvt---~~~~p~l~~vyKLve~-----~g~P~~K~S 117 (268)
|.--.++. ..+.|.+=+|+-.+|+ .|-..+|+=
T Consensus 95 ~~~~~v~~~a~~~~i~~iPGv~TpsEi~~A~~~G~~~vKlF 135 (213)
T d1wbha1 95 GLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFF 135 (213)
T ss_dssp SCCHHHHHHHHHSSSCEEEEESSHHHHHHHHHTTCCEEEET
T ss_pred CCCHHHHHHHHhcCCCccCCcCCHHHHHHHHHCCCCEEEec
Confidence 21111221 2235666666666655 255666663
No 24
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]}
Probab=49.25 E-value=6.2 Score=34.75 Aligned_cols=92 Identities=23% Similarity=0.230 Sum_probs=63.8
Q ss_pred HHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEee
Q 024420 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGI 86 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGV 86 (268)
+..+-+.+|.+.|.++.-|..=.|.-......++++-.. ++++.|++.|=-+.+....|.+.|+...--||
T Consensus 107 ~~~er~~~l~~agvd~ivID~A~G~s~~~~~~i~~ik~~---------~~~~~iIaGNV~T~e~a~~L~~aGaD~VkVGi 177 (365)
T d1zfja1 107 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAH---------FPNRTLIAGNIATAEGARALYDAGVDVVKVGI 177 (365)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHH---------CSSSCEEEEEECSHHHHHHHHHTTCSEEEECS
T ss_pred hHHHHHHHHHHcCCCEEEEECCcccccchhHHHHHHHhh---------CCCcceeecccccHHHHHHHHhcCCceEEeee
Confidence 455667777778877755544446655554444444322 57788999999999999999999987666666
Q ss_pred c------CcccccCCCCccceEEEEeE
Q 024420 87 G------TYLVTCYAQAALGCVFKLVE 107 (268)
Q Consensus 87 G------T~Lvt~~~~p~l~~vyKLve 107 (268)
| |+.+|....|.+..++++.+
T Consensus 178 G~Gs~CTTr~~tGvGvPq~sai~~~~~ 204 (365)
T d1zfja1 178 GPGSICTTRVVAGVGVPQVTAIYDAAA 204 (365)
T ss_dssp SCCTTBCHHHHTCCCCCHHHHHHHHHH
T ss_pred cccccccCcceeeeeccchhHHHHHHH
Confidence 5 34455677888888876643
No 25
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]}
Probab=46.59 E-value=19 Score=27.51 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=29.5
Q ss_pred CCeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCccc
Q 024420 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 56 ~~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
.++.|+++||+ +.+.+.++.+.| .|++-|||.|+
T Consensus 174 ~~iPVia~GGI~t~~d~~~~~~~G--AdgV~iGsAi~ 208 (222)
T d1y0ea_ 174 VDAKVIAEGNVITPDMYKRVMDLG--VHCSVVGGAIT 208 (222)
T ss_dssp CCSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC--CCEEEEchhhc
Confidence 45789999999 899999999988 57888999885
No 26
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=44.79 E-value=35 Score=27.58 Aligned_cols=100 Identities=20% Similarity=0.193 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcc-cE
Q 024420 5 VPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEV-DA 83 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~i-d~ 83 (268)
...++.++++|.+.|.+..=|-+.|.+ +.++.+.+.+. ++++.|=+..=+|.+.+++..+.|+.. .+
T Consensus 28 ~~~a~~~~~al~~~Gi~~iEitl~~p~----a~~~i~~l~~~--------~p~~~vGaGTV~~~~~~~~a~~aGa~Fivs 95 (216)
T d1mxsa_ 28 EEDILPLADALAAGGIRTLEVTLRSQH----GLKAIQVLREQ--------RPELCVGAGTVLDRSMFAAVEAAGAQFVVT 95 (216)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEESSSTH----HHHHHHHHHHH--------CTTSEEEEECCCSHHHHHHHHHHTCSSEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCChh----HHHHHHHHHHh--------CCCcceeeeeeecHHHHHHHHhCCCCEEEC
Confidence 346778888888888888888888765 33444444442 456777777778888888888777631 11
Q ss_pred EeecCcccc---cCCCCccceEEEEeEE-----CCcccccc
Q 024420 84 FGIGTYLVT---CYAQAALGCVFKLVEI-----NKQPRIKL 116 (268)
Q Consensus 84 fGVGT~Lvt---~~~~p~l~~vyKLve~-----~g~P~~K~ 116 (268)
=|.-..++. ..+.|.+=+|+-.+|+ .|-..+|+
T Consensus 96 P~~~~~v~~~a~~~~i~~iPGv~TpsEi~~A~~~G~~~vKl 136 (216)
T d1mxsa_ 96 PGITEDILEAGVDSEIPLLPGISTPSEIMMGYALGYRRFKL 136 (216)
T ss_dssp SSCCHHHHHHHHHCSSCEECEECSHHHHHHHHTTTCCEEEE
T ss_pred CCCcHHHHHHHHhcCCCccCCcCCHHHHHHHHHCCCCEEEe
Confidence 111111111 2235666666655555 24455665
No 27
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=44.20 E-value=9.6 Score=32.50 Aligned_cols=76 Identities=11% Similarity=0.263 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHhhcCCCccEEeeCC--------------CChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHH
Q 024420 5 VPNFCAVALALNDLGYKAVGIRLDS--------------GDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEE 69 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRlDS--------------GDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~ 69 (268)
+..++++++.|.+.|..+.-+..-. |....+++++| ...++.++++|++ |.+
T Consensus 227 ~~~~~~~~~~l~~~g~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ik-------------~~~~~pvi~~G~i~~~~ 293 (330)
T d1ps9a1 227 FAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLK-------------GHVSLPLVTTNRINDPQ 293 (330)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHT-------------TSCSSCEEECSSCCSHH
T ss_pred HHHHHHHHHHHHHhhhhhhhcccccccccccccCCCCcchhHHHHHHHHH-------------hhCCceEEEeCCCCCHH
Confidence 4668889999988887664442210 11223332222 2245678889998 799
Q ss_pred HHHHHhhcCCcccEEeecCcccccC
Q 024420 70 TLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 70 ~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
.++++++.|. .|..|+|-.++..+
T Consensus 294 ~ae~~l~~g~-~D~V~~gR~~iadP 317 (330)
T d1ps9a1 294 VADDILSRGD-ADMVSMARPFLADA 317 (330)
T ss_dssp HHHHHHHTTS-CSEEEESTHHHHCT
T ss_pred HHHHHHHCCC-cchhHhhHHHHhCh
Confidence 9999998774 78999999887644
No 28
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=39.99 E-value=54 Score=26.25 Aligned_cols=101 Identities=18% Similarity=0.165 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCc-ccE
Q 024420 5 VPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE-VDA 83 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~-id~ 83 (268)
...++.++++|.+.|.+..=|-+.|.. +.++.+.+.+. ++++.|=+.-=+|.+.++...+.|+. +.+
T Consensus 25 ~~~~~~~~~al~~~Gi~~iEitl~~~~----a~~~I~~l~~~--------~p~~~vGaGTV~~~~~~~~a~~aGa~FivS 92 (212)
T d1vhca_ 25 ADDILPLADTLAKNGLSVAEITFRSEA----AADAIRLLRAN--------RPDFLIAAGTVLTAEQVVLAKSSGADFVVT 92 (212)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTSTT----HHHHHHHHHHH--------CTTCEEEEESCCSHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCChh----HHHHHHHHHhc--------CCCceEeeeecccHHHHHHHHhhCCcEEEC
Confidence 346777888888888888888888766 33444444332 35667777777788888777777653 111
Q ss_pred EeecCcccc---cCCCCccceEEEEeEE-----CCccccccC
Q 024420 84 FGIGTYLVT---CYAQAALGCVFKLVEI-----NKQPRIKLS 117 (268)
Q Consensus 84 fGVGT~Lvt---~~~~p~l~~vyKLve~-----~g~P~~K~S 117 (268)
=|+-..++. ..+.|.+-+|+-.+|+ .|-..+|+=
T Consensus 93 P~~~~~v~~~a~~~~i~~iPGv~TpsEi~~A~~~G~~~vK~F 134 (212)
T d1vhca_ 93 PGLNPKIVKLCQDLNFPITPGVNNPMAIEIALEMGISAVKFF 134 (212)
T ss_dssp SSCCHHHHHHHHHTTCCEECEECSHHHHHHHHHTTCCEEEET
T ss_pred CCCCHHHHHHHHhcCCCccCCcCCHHHHHHHHHCCCCEEEEc
Confidence 122222221 2356777777776666 266777763
No 29
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=39.70 E-value=12 Score=30.70 Aligned_cols=51 Identities=12% Similarity=0.095 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
.-.+++++++++. ++ ++.|.+-||+|.+.|..+.+.|+ |.|=+|+.+..+.
T Consensus 164 ~kI~~~~~~~~~~-------~~-~~~I~vDGGIn~~~i~~l~~~Ga--d~~V~GS~if~~~ 214 (230)
T d1rpxa_ 164 KKISDLRKICAER-------GL-NPWIEVDGGVGPKNAYKVIEAGA--NALVAGSAVFGAP 214 (230)
T ss_dssp HHHHHHHHHHHHH-------TC-CCEEEEESSCCTTTHHHHHHHTC--CEEEESHHHHTSS
T ss_pred HHHHHHHHHHHhc-------CC-ceEEEEECCcCHHHHHHHHHcCC--CEEEEChHHHCCC
Confidence 4455677778775 33 46999999999999999999885 5555778887643
No 30
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]}
Probab=39.67 E-value=9.8 Score=32.80 Aligned_cols=131 Identities=20% Similarity=0.237 Sum_probs=78.9
Q ss_pred HHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEee
Q 024420 7 NFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGI 86 (268)
Q Consensus 7 nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGV 86 (268)
+..+.+..+-+.|.++.-|-.--|....+...++. +.+. ++++.|++.|--+.+....|.+.|+....-||
T Consensus 98 ~~~e~~~~li~agvd~ivId~A~G~~~~~~~~ik~-ik~~--------~~~~~viaGnV~t~~~a~~l~~~GaD~v~VGi 168 (330)
T d1vrda1 98 ETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEM-IKAD--------YPDLPVVAGNVATPEGTEALIKAGADAVKVGV 168 (330)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHH-HHHH--------CTTSCEEEEEECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHHHCCCCEEEEecCCCCchhHHHHHHH-HHHh--------CCCCCEEeechhHHHHHHHHHHcCCCEEeecc
Confidence 44556666777787765554444665444333322 2221 36789999999999999999999986665666
Q ss_pred c------CcccccCCCCccceEEEEeEE-C--CccccccCCCCCCCCCCc--cceeeeeccCCCCeeeeEEecCCCC
Q 024420 87 G------TYLVTCYAQAALGCVFKLVEI-N--KQPRIKLSEDVSKVSIPC--KKRSYRLYGKEGYPLVDIMTGENEP 152 (268)
Q Consensus 87 G------T~Lvt~~~~p~l~~vyKLve~-~--g~P~~K~S~~~~K~t~PG--~K~vyR~~~~~g~~~~D~i~l~~e~ 152 (268)
| |+..+....|.+..++.+..+ + +.|++ ++ |-...+| .|.+ -.++++-+++-++....|.
T Consensus 169 g~Gs~ctt~~~~G~g~p~~sai~~~~~~~~~~~vpvI--Ad--GGi~~~gdiakAl--a~GAd~Vm~Gs~fa~~~E~ 239 (330)
T d1vrda1 169 GPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPII--AD--GGIRYSGDIVKAL--AAGAESVMVGSIFAGTEEA 239 (330)
T ss_dssp SCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEE--EE--SCCCSHHHHHHHH--HTTCSEEEESHHHHTBTTS
T ss_pred ccCccccccceeccccccchhHHHHHHHHHhcCceEE--ec--CCcccCCchheee--eccCceeeecchheeeccc
Confidence 5 556667778888887766544 2 24655 33 3333333 1222 2245555555555555553
No 31
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]}
Probab=39.44 E-value=10 Score=30.80 Aligned_cols=51 Identities=12% Similarity=0.051 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
.-.+++++++++. ++ ++.|.+-||+|.+.|..+.+.|+ |.|=+|+.+..+.
T Consensus 156 ~ki~~l~~~~~~~-------~~-~~~I~VDGGIn~~~i~~l~~~Ga--d~~V~GS~if~~~ 206 (221)
T d1tqja_ 156 PKIRALRQMCDER-------GL-DPWIEVDGGLKPNNTWQVLEAGA--NAIVAGSAVFNAP 206 (221)
T ss_dssp HHHHHHHHHHHHH-------TC-CCEEEEESSCCTTTTHHHHHHTC--CEEEESHHHHTSS
T ss_pred HHHHHHHhhhhcc-------cc-ceEEEEECCcCHHHHHHHHHcCC--CEEEEChHHhCCC
Confidence 4455677778775 44 46999999999999999999885 4455678887643
No 32
>d1ea0a2 c.1.4.1 (A:423-1193) Alpha subunit of glutamate synthase, central and FMN domains {Azospirillum brasilense [TaxId: 192]}
Probab=39.20 E-value=12 Score=36.18 Aligned_cols=56 Identities=20% Similarity=0.388 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCC-eEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCCCCccceEE
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEK-MSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVF 103 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~-vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~vy 103 (268)
+-..++++.|++. |+.+ |+|++||+| +...+.....-| .|.|++||.... ++||++
T Consensus 625 ~~l~~~~~~L~~~-------glr~~V~l~a~Ggl~t~~Dv~ka~aLG--AD~v~~gt~~m~-----alGCi~ 682 (771)
T d1ea0a2 625 MGLSEVHQVLTLN-------RLRHRVRLRTDGGLKTGRDIVIAAMLG--AEEFGIGTASLI-----AMGCIM 682 (771)
T ss_dssp HHHHHHHHHHHTT-------TCTTTSEEEEESSCCSHHHHHHHHHTT--CSEEECCHHHHH-----HHTCCC
T ss_pred HHHHHHHHHHHHc-------CCCCceEEEEeCCCCCHHHHHHHHHhC--CCchHHhHHHHH-----HhhCHH
Confidence 4445678888886 8776 999999998 456666666677 589999999887 677773
No 33
>d1w0ma_ c.1.1.1 (A:) Triosephosphate isomerase {Thermoproteus tenax [TaxId: 2271]}
Probab=38.86 E-value=19 Score=28.76 Aligned_cols=38 Identities=11% Similarity=0.103 Sum_probs=30.5
Q ss_pred CCeEEEEeCCCCHHHHHHHh-hcCCcccEEeecCcccccCC
Q 024420 56 EKMSITASNDLNEETLDALN-KQGHEVDAFGIGTYLVTCYA 95 (268)
Q Consensus 56 ~~vkIi~S~~Lde~~I~~l~-~~g~~id~fGVGT~Lvt~~~ 95 (268)
+++.|++.||++.....++. ..| +|++-|||..+.+.+
T Consensus 172 ~~i~vlygGgV~~~n~~~~~~~~g--~dGvLVGsA~l~a~d 210 (226)
T d1w0ma_ 172 PEVSVITGAGIESGDDVAAALRLG--TRGVLLASAAVKAKD 210 (226)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHTCSS
T ss_pred CCceEEEecCcCChHHHHHHhcCC--CCEEEechheecCCC
Confidence 67899999999987776665 444 799999999987643
No 34
>d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]}
Probab=38.55 E-value=42 Score=28.69 Aligned_cols=37 Identities=14% Similarity=0.140 Sum_probs=31.4
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
++.+++.|++|.+.++++++.|. .|..|+|-.++..+
T Consensus 296 ~~pvi~~G~i~~~~ae~~l~~g~-aDlV~~gR~~iadP 332 (374)
T d1gwja_ 296 KGGLIYCGNYDAGRAQARLDDNT-ADAVAFGRPFIANP 332 (374)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCCEEEECCcCHHHHHHHHHcCC-CcEehhhHHHHHCc
Confidence 44799999999999999988764 89999999998854
No 35
>d7reqb2 c.23.6.1 (B:476-638) Methylmalonyl-CoA mutase beta subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=37.74 E-value=9.3 Score=29.66 Aligned_cols=68 Identities=10% Similarity=-0.027 Sum_probs=41.4
Q ss_pred hhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 16 NDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 16 ~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.+.|..+.+|=--.++-..+...+.+.|.++ |.. ..+++.+.........+.+.|.. ..|+.|++.+.
T Consensus 83 ~~~~a~vvvicssd~~y~~~~~~~~~aLk~a-------g~~-~~vlaGg~~~~~d~~~l~~aGVd-~~i~~G~d~~~ 150 (163)
T d7reqb2 83 KKSGAQVADLCSSAKVYAQQGLEVAKALKAA-------GAK-ALYLSGAFKEFGDDAAEAEKLID-GRLFMGMDVVD 150 (163)
T ss_dssp HHHTCSEEEEECCHHHHHHHHHHHHHHHHHT-------TCS-EEEEESCGGGGGGGHHHHHHHCC-EEECTTCCHHH
T ss_pred HhCCCCEEEEecCccchHHHHHHHHHHHHhc-------ccc-eeEEEecCCCcccHHHHHhCCCC-eEecCCCcHHH
Confidence 3445555443221122244455677777776 654 46777777777777888877753 56688887654
No 36
>d1jpdx1 c.1.11.2 (X:114-321) L-Ala-D/L-Glu epimerase {Escherichia coli [TaxId: 562]}
Probab=37.54 E-value=17 Score=28.45 Aligned_cols=44 Identities=14% Similarity=0.215 Sum_probs=37.6
Q ss_pred eeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhc
Q 024420 26 RLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (268)
Q Consensus 26 RlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~ 77 (268)
=+.-|.+.++..+++++.++ ||+.+||=++.+.|.+.|+.+++.
T Consensus 11 tv~~~tpe~~~~~a~~~~~~--------G~~~~KiKvg~~~d~~~i~~ir~~ 54 (208)
T d1jpdx1 11 TVVIGTPDQMANSASTLWQA--------GAKLLKVKLDNHLISERMVAIRTA 54 (208)
T ss_dssp EECSCCHHHHHHHHHHHHHT--------TCSEEEEECCSSCHHHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHHHC--------CCCEEEEECCCCcHHHHHHHHHHh
Confidence 35668899999999999887 999999988999999999998754
No 37
>d1tqxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Plasmodium falciparum [TaxId: 5833]}
Probab=37.09 E-value=13 Score=29.96 Aligned_cols=38 Identities=21% Similarity=0.344 Sum_probs=32.0
Q ss_pred CCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 55 FEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 55 ~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
+++++|.+-||+|.+.|..+.+.|+ |.|=+|+.+..+.
T Consensus 168 ~~~~~I~VDGGIn~~~i~~l~~aGa--d~iV~GS~if~~~ 205 (221)
T d1tqxa_ 168 YKNLNIQVDGGLNIETTEISASHGA--NIIVAGTSIFNAE 205 (221)
T ss_dssp CTTCEEEEESSCCHHHHHHHHHHTC--CEEEESHHHHTCS
T ss_pred cCCcceEEEcccCHHhHHHHHHcCC--CEEEEChHHHCCC
Confidence 3568999999999999999999885 6677888887654
No 38
>d1ofda2 c.1.4.1 (A:431-1239) Alpha subunit of glutamate synthase, central and FMN domains {Synechocystis sp. [TaxId: 1143]}
Probab=36.63 E-value=16 Score=35.64 Aligned_cols=56 Identities=16% Similarity=0.316 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHhHhhCCCCCCC-eEEEEeCCCC-HHHHHHHhhcCCcccEEeecCcccccCCCCccceEE
Q 024420 34 YLSCEARKFFRTIEKEFGVPDFEK-MSITASNDLN-EETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVF 103 (268)
Q Consensus 34 ~ls~~~R~~ld~~~~~l~~~G~~~-vkIi~S~~Ld-e~~I~~l~~~g~~id~fGVGT~Lvt~~~~p~l~~vy 103 (268)
+-..++.+.|.+. |+.+ |++++||+|- ...+......| .|.|++||.... ++||++
T Consensus 652 ~gl~~a~~~L~~~-------glR~~V~Lia~Ggl~t~~Dv~ka~aLG--AD~v~~gt~~l~-----alGCi~ 709 (809)
T d1ofda2 652 LGVTEVHRVLMEN-------QLRDRVLLRADGGLKTGWDVVMAALMG--AEEYGFGSIAMI-----AEGCIM 709 (809)
T ss_dssp HHHHHHHHHHHHT-------TCGGGCEEEEESSCCSHHHHHHHHHTT--CSEEECSHHHHH-----HTTCCC
T ss_pred HHHHHHHHHHHHc-------CCCCceEEEEeCCCCCHHHHHHHHHhC--CCchhHhHHHHH-----HHHCHH
Confidence 4445678888886 8776 9999999984 55555555667 579999999887 677774
No 39
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=34.72 E-value=13 Score=29.97 Aligned_cols=38 Identities=16% Similarity=0.337 Sum_probs=31.8
Q ss_pred CCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccC
Q 024420 55 FEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCY 94 (268)
Q Consensus 55 ~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~ 94 (268)
.++++|.+-||+|.+.+..+.+.| +|.|=+|+.+..+.
T Consensus 166 ~~~~~I~VDGGIn~~~i~~l~~aG--ad~~V~GS~if~~~ 203 (220)
T d1h1ya_ 166 YPSLDIEVDGGLGPSTIDVAASAG--ANCIVAGSSIFGAA 203 (220)
T ss_dssp CTTSEEEEESSCSTTTHHHHHHHT--CCEEEESHHHHTSS
T ss_pred CCCceEEEEecCCHHHHHHHHHCC--CCEEEECHHHHCCC
Confidence 356899999999999999999988 56677888887643
No 40
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=34.23 E-value=9.8 Score=31.15 Aligned_cols=37 Identities=8% Similarity=0.112 Sum_probs=30.2
Q ss_pred CCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccc
Q 024420 54 DFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 54 G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
.|++++++.+||++.+.+.++++.|+- .-|.|+.|+.
T Consensus 154 p~p~~~fiptGGV~~~n~~~yl~~~~v--~avggs~l~~ 190 (216)
T d1mxsa_ 154 PFGDIRFCPTGGVNPANVRNYMALPNV--MCVGTTWMLD 190 (216)
T ss_dssp TTTTCEEEEBSSCCTTTHHHHHHSTTB--CCEEECTTSC
T ss_pred ccccCceeccCCCCHHHHHHHHhcCCe--EEEEccccCC
Confidence 699999999999999999999987642 3355777765
No 41
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=33.00 E-value=19 Score=30.12 Aligned_cols=54 Identities=13% Similarity=0.149 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHH-hHhhCCCCCCCeEEEEeCCCCHHHHHHHhhc-CCcccEEeecCc
Q 024420 34 YLSCEARKFFRTI-EKEFGVPDFEKMSITASNDLNEETLDALNKQ-GHEVDAFGIGTY 89 (268)
Q Consensus 34 ~ls~~~R~~ld~~-~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~-g~~id~fGVGT~ 89 (268)
+.+..+|+.|.++ ..++.. -..+-++.|||||=-.|..+..+ +..+..|-+|+.
T Consensus 12 ea~~~~r~~L~~AV~~rl~~--~~~~gv~LSGGlDSs~iaa~~~~~~~~~~~~s~~~~ 67 (299)
T d1jgta1 12 EAVAAVRAALEKAVAQRVTP--GDTPLVVLSGGIDSSGVAACAHRAAGELDTVSMGTD 67 (299)
T ss_dssp HHHHHHHHHHHHHHHHHSCT--TCCCEEECCSSHHHHHHHHHHHHHHSSCEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCCEEEEccCHHHHHHHHHHHHHhCCCcceeecCcc
Confidence 3455688888888 655542 24457899999999998888753 346788888874
No 42
>d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]}
Probab=31.56 E-value=70 Score=24.77 Aligned_cols=61 Identities=15% Similarity=0.090 Sum_probs=40.6
Q ss_pred HhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC--CHHHHHHHhhcCCcccEEee
Q 024420 15 LNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL--NEETLDALNKQGHEVDAFGI 86 (268)
Q Consensus 15 L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L--de~~I~~l~~~g~~id~fGV 86 (268)
.++.|+++ +-..++|.......++.++.. + -+.-|+.+-+- ....++.+.+.|.|+..+.-
T Consensus 27 a~~~G~~~--i~~~~~d~~~q~~~i~~li~~--------~-vDgiIi~~~~~~~~~~~~~~a~~~giPVV~~d~ 89 (305)
T d8abpa_ 27 GKDLGFEV--IKIAVPDGEKTLNAIDSLAAS--------G-AKGFVICTPDPKLGSAIVAKARGYDMKVIAVDD 89 (305)
T ss_dssp HHHHTEEE--EEEECCSHHHHHHHHHHHHHT--------T-CCEEEEECSCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred HHHcCCEE--EEEcCCCHHHHHHHHHHHHHc--------C-CCEEEEccccccccHHHHHHHHhcCCCEEEEcC
Confidence 34568887 445788877776667777655 3 34355555433 36778888889988888743
No 43
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=31.15 E-value=32 Score=28.23 Aligned_cols=50 Identities=10% Similarity=0.101 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccc
Q 024420 33 AYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVT 92 (268)
Q Consensus 33 ~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt 92 (268)
..++-++.+.+.+. .+++.|+++||+ +.+.+.++...|| |.-+|||.++.
T Consensus 239 ~~~al~~v~~~~~~--------~~~ipIi~~GGI~~~~d~~~~l~aGA--~~Vqv~ta~~~ 289 (312)
T d1gtea2 239 RPIALRAVTTIARA--------LPGFPILATGGIDSAESGLQFLHSGA--SVLQVCSAVQN 289 (312)
T ss_dssp HHHHHHHHHHHHHH--------STTCCEEEESSCCSHHHHHHHHHTTC--SEEEESHHHHT
T ss_pred chhhHHHHHHHHHH--------cCCCcEEEEcCCCCHHHHHHHHHcCC--CeeEECHhhhc
Confidence 34555555555553 245789999999 8889999988885 67789998876
No 44
>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]}
Probab=30.05 E-value=17 Score=28.41 Aligned_cols=38 Identities=18% Similarity=0.302 Sum_probs=32.0
Q ss_pred CCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCC
Q 024420 56 EKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYA 95 (268)
Q Consensus 56 ~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~ 95 (268)
.++.|++=||+|.+.+.++.+.| .+++.|.+.+.++.+
T Consensus 152 ~~~Pv~AiGGI~~~ni~~~~~~G--a~gvAvis~I~~~~d 189 (206)
T d1xi3a_ 152 VKIPVVAIGGINKDNAREVLKTG--VDGIAVISAVMGAED 189 (206)
T ss_dssp CSSCEEEESSCCTTTHHHHHTTT--CSEEEESHHHHTSSS
T ss_pred cCCCEEEECCCCHHHHHHHHHhC--CCEEEEhHHHHCCCC
Confidence 35689999999999999999877 678899999887543
No 45
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=29.81 E-value=35 Score=26.67 Aligned_cols=64 Identities=6% Similarity=0.092 Sum_probs=34.5
Q ss_pred HHHHHhhcCCCccEEee-CCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCH--HHHHHHhhcCCcccEEe
Q 024420 11 VALALNDLGYKAVGIRL-DSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNE--ETLDALNKQGHEVDAFG 85 (268)
Q Consensus 11 Va~~L~~~G~~l~GVRl-DSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde--~~I~~l~~~g~~id~fG 85 (268)
+-+++++.|+++. |-. +..|+......++.+++. +.+- |+++...+. ..+..+...+.|+..++
T Consensus 22 i~~~a~~~Gy~v~-v~~~~~~~~~~~~~~l~~l~~~--------~vdg--iIl~~~~~~~~~~~~~~~~~~iPvV~~d 88 (271)
T d1jyea_ 22 ILSRADQLGASVV-VSMVERSGVEACKTAVHNLLAQ--------RVSG--LIINYPLDDQDAIAVEAACTNVPALFLD 88 (271)
T ss_dssp HHHHHHHTTCEEE-EEECCSSSHHHHHHHHHHHHTT--------TCSC--EEEESCCCHHHHHHHHHHTTTSCEEESS
T ss_pred HHHHHHHcCCEEE-EEECCCCCHHHHHHHHHHHHhc--------CCCE--EEeccccCchhHHHHHHHhcCCCeeeee
Confidence 4455678899873 443 335655555555555544 3333 233333333 34455666777776664
No 46
>d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]}
Probab=29.76 E-value=10 Score=32.80 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=32.8
Q ss_pred CeEEEEeCCCCHHHHHHHhhcCCcccEEeecCcccccCC
Q 024420 57 KMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYA 95 (268)
Q Consensus 57 ~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lvt~~~ 95 (268)
++.|+++|+++.+..++++++|. .|..|+|--++..++
T Consensus 307 ~~pv~~~Gg~~~~~ae~~l~~G~-~DlV~~gR~liaDPd 344 (380)
T d1q45a_ 307 NGTFMSSGGFNKELGMQAVQQGD-ADLVSYGRLFIANPD 344 (380)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCTT
T ss_pred CCcEEeCCCCCHHHHHHHHHcCC-ccchhhhHHHHHCcc
Confidence 45799999999999999998874 799999999998654
No 47
>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=27.63 E-value=9.5 Score=32.50 Aligned_cols=39 Identities=13% Similarity=0.135 Sum_probs=31.6
Q ss_pred CCeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCcccccCC
Q 024420 56 EKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLVTCYA 95 (268)
Q Consensus 56 ~~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lvt~~~ 95 (268)
.++.|+++|++ +.+.++++++.|. .|..|+|.-++..++
T Consensus 290 ~~~pVi~~G~i~~~~~a~~~l~~G~-aDlV~~gR~~iadPd 329 (340)
T d1djqa1 290 SKKPVLGVGRYTDPEKMIEIVTKGY-ADIIGCARPSIADPF 329 (340)
T ss_dssp CSSCEEECSCCCCHHHHHHHHHTTS-CSBEEESHHHHHCTT
T ss_pred cCCeEEEECCCCCHHHHHHHHHCCC-ccchhhHHHHHHCcc
Confidence 34579999999 6999999998764 788999998887543
No 48
>d1n3ya_ c.62.1.1 (A:) Integrin alpha-x beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.05 E-value=46 Score=24.66 Aligned_cols=40 Identities=18% Similarity=0.236 Sum_probs=27.4
Q ss_pred CCCCCCeEEEEeCCCC-------HHHHHHHhhcCCcccEEeecCccc
Q 024420 52 VPDFEKMSITASNDLN-------EETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 52 ~~G~~~vkIi~S~~Ld-------e~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
.++.+++-|++++|-. ...++.+...|..+-+.|+|....
T Consensus 100 r~~~~kvivllTDG~~~~~~~~~~~~~~~~~~~gv~i~~Vgig~~~~ 146 (189)
T d1n3ya_ 100 RRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQ 146 (189)
T ss_dssp CTTSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGG
T ss_pred CCCCceEEEEEecCCCCCCcccHHHHHHHHHHCCCceEEEecccccc
Confidence 3456678889988753 445556667787777888887543
No 49
>d2btma_ c.1.1.1 (A:) Triosephosphate isomerase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=26.80 E-value=9 Score=31.79 Aligned_cols=57 Identities=16% Similarity=0.264 Sum_probs=41.4
Q ss_pred ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccEEeecCccc
Q 024420 31 DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 31 Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
+.......+|+.|.+. ++.....+++|+..|+.+++-+.+|... -.+|++=||+.=.
T Consensus 181 ~i~e~~~~Ir~~l~~~---~~~~~~~~i~ilYGGSV~~~N~~~i~~~-~~vDG~LVG~ASl 237 (251)
T d2btma_ 181 DANSVCGHIRSVVSRL---FGPEAAEAIRIQYGGSVKPDNIRDFLAQ-QQIDGALVGGASL 237 (251)
T ss_dssp HHHHHHHHHHHHHHHH---HCHHHHTTSEEEEESSCCTTTHHHHHTS-TTCCEEEESGGGS
T ss_pred hhhhhHHHHHHHHHhh---cchhhcccCcEEeeCCCCHhHHHHHhcC-CCCCEEEechHhC
Confidence 4445556677877764 2222236789999999999999999875 3489999998643
No 50
>d1r0ma1 c.1.11.2 (A:133-375) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]}
Probab=26.39 E-value=36 Score=26.71 Aligned_cols=39 Identities=8% Similarity=0.145 Sum_probs=31.1
Q ss_pred ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhc
Q 024420 31 DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (268)
Q Consensus 31 Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~ 77 (268)
|+..+..++++.+++ ||+.+||=++.+.|.+.|+.+++.
T Consensus 16 ~~e~~~~~~~~~~~~--------G~~~~KiKvg~~~D~~~v~~ir~~ 54 (243)
T d1r0ma1 16 DEQATVDLVRRHVEQ--------GYRRIKLKIKPGWDVQPVRATREA 54 (243)
T ss_dssp SHHHHHHHHHHHHHT--------TCSCEEEECBTTBSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CCCEEEEEcCcchhHHHHHHHHHh
Confidence 667777778888877 888888888888888888888753
No 51
>d1i1ga2 d.58.4.2 (A:62-141) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=26.23 E-value=14 Score=24.37 Aligned_cols=35 Identities=11% Similarity=0.083 Sum_probs=28.2
Q ss_pred ccccccccccccCCCCcHHHHHHHHHHHHhcCChhhhh
Q 024420 198 VFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMR 235 (268)
Q Consensus 198 ~~~~~~~~~~~~~~~~sL~~iR~~~~~~l~~l~~~~~r 235 (268)
+.|+.+|+.+... ++++++++...+.+.++| .+.+
T Consensus 35 vtG~~D~~~~v~~--~d~~~l~~~l~~~i~~~~-gV~~ 69 (80)
T d1i1ga2 35 SSGDHMIMAVIWA--KDGEDLAEIISNKIGKIE-GVTK 69 (80)
T ss_dssp CSSSSSEEEEEEE--SSHHHHHHHHHHTTTTST-TEEE
T ss_pred ECCCCCEEEEEEE--CCHHHHHHHHHhhhccCC-CEEE
Confidence 5688899988864 799999999999999884 3443
No 52
>d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.83 E-value=18 Score=29.52 Aligned_cols=39 Identities=13% Similarity=0.020 Sum_probs=25.5
Q ss_pred HHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHH
Q 024420 8 FCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTI 46 (268)
Q Consensus 8 ai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~ 46 (268)
++.+|+.|...|++..-+=+...+...+.++..+.+...
T Consensus 71 Gl~~Ar~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~ 109 (243)
T d1jzta_ 71 GLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFF 109 (243)
T ss_dssp HHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCeeEEEEeCCCcCCHHHHHHHHHHHHC
Confidence 567888888888876555555555556666666666553
No 53
>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]}
Probab=24.65 E-value=81 Score=23.82 Aligned_cols=68 Identities=13% Similarity=0.027 Sum_probs=44.1
Q ss_pred HHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCC-------CCHHHHHHHhhcCCcccE
Q 024420 11 VALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASND-------LNEETLDALNKQGHEVDA 83 (268)
Q Consensus 11 Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~-------Lde~~I~~l~~~g~~id~ 83 (268)
++..|+++|.++.-+|.|.++-. ..+.++.. +...|+.|+| .+...+....+.+.|+-+
T Consensus 16 i~~~l~~lG~~~~v~~~~~~~~~-----~~~~l~~~---------~~~~iils~Gpg~~~~~~~~~~i~~~l~~~iPiLG 81 (192)
T d1i7qb_ 16 LVDQLRASGHQVVIYRNQIGAEV-----IIERLQHM---------EQPVLMLSPGPGTPSEAGCMPELLQRLRGQLPIIG 81 (192)
T ss_dssp HHHHHHHTTCEEEEEETTSCHHH-----HHHHHHHC---------SSEEEEECCCSSCGGGSTTHHHHHHHHBTTBCEEE
T ss_pred HHHHHHHCCCeEEEEeCCCcccc-----cHHHHHhc---------CCCeEEecCccccccccccchhhHHhhhcCccEEe
Confidence 56778889999988998888422 22334442 3447777765 333455566666777777
Q ss_pred EeecCcccc
Q 024420 84 FGIGTYLVT 92 (268)
Q Consensus 84 fGVGT~Lvt 92 (268)
.+.|--++.
T Consensus 82 IClG~Q~la 90 (192)
T d1i7qb_ 82 ICLGHQAIV 90 (192)
T ss_dssp ETHHHHHHH
T ss_pred eeHHHHHHH
Confidence 777776665
No 54
>d1miob_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Clostridium pasteurianum [TaxId: 1501]}
Probab=24.11 E-value=1.1e+02 Score=26.25 Aligned_cols=72 Identities=10% Similarity=0.038 Sum_probs=47.0
Q ss_pred chHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcccE
Q 024420 4 GVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDA 83 (268)
Q Consensus 4 Gv~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~id~ 83 (268)
+-..++.+++.|.+.|.....+-.++++. +.....++.+.+. +...+.++.+.++ +.+.++..+..|--.
T Consensus 319 ~~~~~~~l~~~L~elg~~~~~~~~~~~~~-~~~~~~~~~l~~~-------~~~~~~v~~~~d~--~e~~~~i~~~~pDLv 388 (457)
T d1miob_ 319 DPDEIIALSKFIIELGAIPKYVVTGTPGM-KFQKEIDAMLAEA-------GIEGSKVKVEGDF--FDVHQWIKNEGVDLL 388 (457)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEESSCCH-HHHHHHHHHHHTT-------TCCSCEEEESCBH--HHHHHHHHHSCCSEE
T ss_pred CcHHHHHHHHHHHHcCCeeeeeecCCCCH-HHHHHHHHHHHhc-------CCCCCEEEeCCCH--HHHHHHHHhcCCCEE
Confidence 34467888999999888877777777653 3555677777775 6667788888766 445555443333334
Q ss_pred Ee
Q 024420 84 FG 85 (268)
Q Consensus 84 fG 85 (268)
||
T Consensus 389 ig 390 (457)
T d1miob_ 389 IS 390 (457)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 55
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.92 E-value=29 Score=28.11 Aligned_cols=60 Identities=17% Similarity=0.232 Sum_probs=40.7
Q ss_pred HHHHHHhhcCCCccEE-eeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhc
Q 024420 10 AVALALNDLGYKAVGI-RLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (268)
Q Consensus 10 ~Va~~L~~~G~~l~GV-RlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~ 77 (268)
.++++|.+.|+++.|+ |+.+|....+. .++....+. .+.+++++..+..|+.........
T Consensus 31 ~lv~~L~~~g~~V~~~d~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~d~~d~~~~~~~~~~ 91 (341)
T d1sb8a_ 31 NLLETLLKLDQKVVGLDNFATGHQRNLD-EVRSLVSEK-------QWSNFKFIQGDIRNLDDCNNACAG 91 (341)
T ss_dssp HHHHHHHHTTCEEEEEECCSSCCHHHHH-HHHHHSCHH-------HHTTEEEEECCTTSHHHHHHHHTT
T ss_pred HHHHHHHHCcCEEEEEECCCCcchhhHH-HHHHhhhhc-------ccCCeeEEeecccccccccccccc
Confidence 4678898999999887 66777743332 123333332 357788888888898887766644
No 56
>d1vc4a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Thermus thermophilus [TaxId: 274]}
Probab=23.13 E-value=44 Score=27.74 Aligned_cols=66 Identities=27% Similarity=0.304 Sum_probs=42.2
Q ss_pred cCCCccEEe---eCCC--ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCC-CHHHHHHHhhcCCcccEEeecCccc
Q 024420 18 LGYKAVGIR---LDSG--DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDL-NEETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 18 ~G~~l~GVR---lDSG--Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~L-de~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
.|.++.||- +.|- |+ ..+.++.+++.+. +.+. .+++.+|+ +.+.+..+. .| .|+|=|||+|+
T Consensus 173 ~~a~iIGINnRdL~t~~vd~-~~~~~l~~~i~~~-------~~~~-i~IsESGI~~~~dv~~l~-~g--~davLIGesLm 240 (254)
T d1vc4a_ 173 AGAEVLGINNRDLATLHINL-ETAPRLGRLARKR-------GFGG-VLVAESGYSRKEELKALE-GL--FDAVLIGTSLM 240 (254)
T ss_dssp HTCSEEEEESBCTTTCCBCT-THHHHHHHHHHHT-------TCCS-EEEEESCCCSHHHHHTTT-TT--CSEEEECHHHH
T ss_pred CCCCEEEEeccchhhhhcch-HHHHHhhhccccc-------CCCC-EEEEccCCCCHHHHHHHH-cC--CCEEEEChhhc
Confidence 477888886 2222 22 2345566666553 4444 45555555 788887764 45 79999999999
Q ss_pred ccCC
Q 024420 92 TCYA 95 (268)
Q Consensus 92 t~~~ 95 (268)
.+.+
T Consensus 241 ~~~d 244 (254)
T d1vc4a_ 241 RAPD 244 (254)
T ss_dssp TSSC
T ss_pred CCCC
Confidence 8654
No 57
>d1ijba_ c.62.1.1 (A:) von Willebrand factor A1 domain, vWA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.87 E-value=40 Score=25.57 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=26.1
Q ss_pred CCCCCCeEEEEeCCCC--------HHHHHHHhhcCCcccEEeecCcc
Q 024420 52 VPDFEKMSITASNDLN--------EETLDALNKQGHEVDAFGIGTYL 90 (268)
Q Consensus 52 ~~G~~~vkIi~S~~Ld--------e~~I~~l~~~g~~id~fGVGT~L 90 (268)
.++.+++-|++.+|-+ +..+..+++.|..+-+.|||...
T Consensus 112 r~~~~k~vivitdg~~~~~~~~~~~~~~~~l~~~gv~i~~Vgig~~~ 158 (202)
T d1ijba_ 112 RPEASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHA 158 (202)
T ss_dssp CTTSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTTS
T ss_pred CCCCcceEEEecccCCCcccchHHHHHHHHHHHcCCeEEEEEeCCcC
Confidence 3455667777766542 24556677788888888888655
No 58
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=22.84 E-value=1e+02 Score=22.45 Aligned_cols=66 Identities=15% Similarity=0.101 Sum_probs=44.3
Q ss_pred HHHHHHHhhcCCCccEEeeCCCC------------------hH---HHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCC
Q 024420 9 CAVALALNDLGYKAVGIRLDSGD------------------LA---YLSCEARKFFRTIEKEFGVPDFEKMSITASNDLN 67 (268)
Q Consensus 9 i~Va~~L~~~G~~l~GVRlDSGD------------------l~---~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Ld 67 (268)
=.|++.|.+.|+++..|-+..+. ++ -=+..+.++++++.. . |. ++-++.+|+.+
T Consensus 36 ~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~vp~~~~~~~~~e~~~-~---g~-k~v~~~~G~~~ 110 (139)
T d2d59a1 36 NIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIK-K---GA-KVVWFQYNTYN 110 (139)
T ss_dssp HHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHH-H---TC-SEEEECTTCCC
T ss_pred HHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEEeCHHHHHHHHHHHHH-h---CC-CEEEEeccccC
Confidence 46788888999998888877552 11 112335555555522 2 43 35788899999
Q ss_pred HHHHHHHhhcCC
Q 024420 68 EETLDALNKQGH 79 (268)
Q Consensus 68 e~~I~~l~~~g~ 79 (268)
|+..+.+.++|.
T Consensus 111 ee~~~~a~~~gi 122 (139)
T d2d59a1 111 REASKKADEAGL 122 (139)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC
Confidence 998888887764
No 59
>d1sjda1 c.1.11.2 (A:126-367) N-acylamino acid racemase {Amycolatopsis sp. [TaxId: 37632]}
Probab=22.81 E-value=53 Score=25.59 Aligned_cols=39 Identities=8% Similarity=0.215 Sum_probs=32.8
Q ss_pred ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhc
Q 024420 31 DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (268)
Q Consensus 31 Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~ 77 (268)
++.++..++++.+++ ||+.+||=++.+-|.+.|+.+++.
T Consensus 16 ~~~~~~~~~~~~~~~--------Gf~~~Kikvg~~~Di~~i~~ir~~ 54 (242)
T d1sjda1 16 TIPQLLDVVGGYLDE--------GYVRIKLKIEPGWDVEPVRAVRER 54 (242)
T ss_dssp CHHHHHHHHHHHHHH--------TCSEEEEECBTTBSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CCCEEEEECCchhHHHHHHHHHHH
Confidence 577888888888877 999999888888888888888864
No 60
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=22.62 E-value=1.1e+02 Score=23.99 Aligned_cols=65 Identities=20% Similarity=0.090 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCc
Q 024420 5 VPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE 80 (268)
Q Consensus 5 v~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~ 80 (268)
...++.++++|-+.|.+..=|-+.|.+-....+++++.+. +++.|=+.-=+|.+.+++..+.|+.
T Consensus 20 ~~~a~~~~~al~~~Gi~~iEitlr~p~a~~~i~~l~~~~~-----------~~~~vGaGTV~~~~~~~~a~~aGa~ 84 (202)
T d1wa3a1 20 VEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE-----------KGAIIGAGTVTSVEQCRKAVESGAE 84 (202)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH-----------TTCEEEEESCCSHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCccHHHHHHHHHHhcC-----------CCcEEEecccccHHHHHHHHhhccc
Confidence 5678999999999999998899999874443333333221 4455556666788888888877764
No 61
>d1v7pc_ c.62.1.1 (C:) Integrin alpha2-beta1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.37 E-value=41 Score=25.09 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=26.5
Q ss_pred CCCCCCeEEEEeCCC--C----HHHHHHHhhcCCcccEEeecCccc
Q 024420 52 VPDFEKMSITASNDL--N----EETLDALNKQGHEVDAFGIGTYLV 91 (268)
Q Consensus 52 ~~G~~~vkIi~S~~L--d----e~~I~~l~~~g~~id~fGVGT~Lv 91 (268)
.++.+++-|++++|- | +..+.+++..|..+-+.|||....
T Consensus 100 R~~~~kvvVllTDG~s~d~~~~~~~~~~~~~~gv~v~~Igvg~~~~ 145 (193)
T d1v7pc_ 100 RRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLGYLN 145 (193)
T ss_dssp CTTSEEEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEECHHHH
T ss_pred CCCCceEEEEEecCCcCCCccHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 445667888998874 2 245566667777777778877643
No 62
>d1wufa1 c.1.11.2 (A:1127-1370) N-acylamino acid racemase {Listeria innocua [TaxId: 1642]}
Probab=21.36 E-value=59 Score=25.39 Aligned_cols=39 Identities=10% Similarity=0.280 Sum_probs=31.7
Q ss_pred ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhc
Q 024420 31 DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (268)
Q Consensus 31 Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~ 77 (268)
++..+..++++.+++ ||+.+||=++.+-|.+.++.+++.
T Consensus 16 ~~e~~~~~~~~~~~~--------Gf~~~Kikvg~~~D~~~v~~ir~~ 54 (244)
T d1wufa1 16 NVETLLQLVNQYVDQ--------GYERVKLKIAPNKDIQFVEAVRKS 54 (244)
T ss_dssp CHHHHHHHHHHHHHH--------TCCEEEEECBTTBSHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHC--------CCCEEEEEeCCcHHHHHHHHHHHh
Confidence 577788888888876 888888888888888888888754
No 63
>d1wuea1 c.1.11.2 (A:1127-1367) N-acylamino acid racemase {Enterococcus faecalis [TaxId: 1351]}
Probab=20.28 E-value=63 Score=25.01 Aligned_cols=39 Identities=10% Similarity=0.244 Sum_probs=29.8
Q ss_pred ChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhc
Q 024420 31 DLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQ 77 (268)
Q Consensus 31 Dl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~ 77 (268)
|+.++..++.+.+++ ||+.+||=++.+-|.+.++.+++.
T Consensus 16 ~~~~~~~~~~~~~~~--------G~~~~Kikvg~~~D~~~v~~ir~~ 54 (241)
T d1wuea1 16 DLPQLLKQVQLAVEK--------GYQRVKLKIRPGYDVEPVALIRQH 54 (241)
T ss_dssp CHHHHHHHHHHHHHT--------TCSCEEEECBTTBSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC--------CCCEEEEEcCccHHHHHHHHHHHh
Confidence 456777777777776 888888877888888888887754
Done!