Query 024423
Match_columns 268
No_of_seqs 257 out of 1937
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 04:29:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024423.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024423hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 3.3E-75 7.1E-80 490.4 12.6 255 5-261 35-290 (303)
2 KOG0374 Serine/threonine speci 100.0 3.7E-71 7.9E-76 498.5 21.1 252 4-256 50-303 (331)
3 PTZ00480 serine/threonine-prot 100.0 6.4E-70 1.4E-74 488.9 25.8 258 4-262 50-307 (320)
4 PTZ00244 serine/threonine-prot 100.0 3E-69 6.6E-74 481.4 23.9 251 4-255 43-293 (294)
5 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 5.8E-69 1.3E-73 480.1 24.8 252 4-256 41-292 (293)
6 cd07420 MPP_RdgC Drosophila me 100.0 1.5E-68 3.1E-73 480.7 25.5 247 5-253 39-320 (321)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.1E-68 2.3E-73 476.7 23.8 252 4-257 33-285 (285)
8 smart00156 PP2Ac Protein phosp 100.0 1.1E-67 2.5E-72 468.0 26.5 252 4-256 19-270 (271)
9 PTZ00239 serine/threonine prot 100.0 1E-67 2.2E-72 473.0 24.6 255 4-260 34-290 (303)
10 cd07416 MPP_PP2B PP2B, metallo 100.0 1.4E-66 3.1E-71 467.4 25.7 253 4-258 34-299 (305)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 7.6E-67 1.6E-71 470.3 23.1 252 5-258 48-306 (316)
12 KOG0373 Serine/threonine speci 100.0 3.9E-68 8.4E-73 441.6 11.7 259 5-265 38-298 (306)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.5E-64 3.2E-69 456.0 24.3 250 5-255 40-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 2E-62 4.3E-67 447.3 25.0 254 5-260 54-373 (377)
15 KOG0375 Serine-threonine phosp 100.0 1.2E-60 2.6E-65 420.5 9.6 256 4-261 79-349 (517)
16 KOG0371 Serine/threonine prote 100.0 6.7E-60 1.4E-64 400.2 10.3 260 5-266 52-312 (319)
17 KOG0377 Protein serine/threoni 100.0 2.6E-54 5.7E-59 388.4 9.5 250 12-263 164-439 (631)
18 KOG0376 Serine-threonine phosp 100.0 3.7E-46 8E-51 341.8 11.1 242 16-258 216-460 (476)
19 cd00144 MPP_PPP_family phospho 100.0 6.3E-38 1.4E-42 270.4 19.7 214 17-241 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 100.0 2E-28 4.4E-33 209.5 16.9 176 17-227 1-197 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 100.0 1.2E-27 2.5E-32 209.8 18.5 118 17-136 4-145 (245)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 3.2E-26 7E-31 197.8 16.2 115 17-134 2-143 (222)
23 cd07422 MPP_ApaH Escherichia c 99.9 1.4E-26 3E-31 203.4 12.5 118 17-138 2-126 (257)
24 PRK00166 apaH diadenosine tetr 99.9 1.5E-25 3.3E-30 198.8 18.0 216 16-245 3-261 (275)
25 PRK11439 pphA serine/threonine 99.9 6.3E-26 1.4E-30 195.5 13.5 189 1-229 1-208 (218)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 5.3E-26 1.2E-30 200.4 12.4 118 17-138 4-128 (279)
27 cd07423 MPP_PrpE Bacillus subt 99.9 4E-25 8.6E-30 192.5 17.5 119 14-136 2-142 (234)
28 PHA02239 putative protein phos 99.9 1.5E-24 3.3E-29 188.6 13.7 169 17-227 4-219 (235)
29 cd07421 MPP_Rhilphs Rhilph pho 99.9 1.2E-23 2.5E-28 185.9 15.3 187 16-231 4-283 (304)
30 PRK09968 serine/threonine-spec 99.9 3.4E-23 7.4E-28 178.5 12.3 115 13-134 15-144 (218)
31 cd07424 MPP_PrpA_PrpB PrpA and 99.9 3.7E-23 8E-28 176.9 11.5 167 14-212 2-183 (207)
32 PF00149 Metallophos: Calcineu 99.5 4.9E-13 1.1E-17 106.8 12.5 157 16-208 3-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.4 2.9E-11 6.2E-16 98.2 16.2 82 16-134 2-86 (155)
34 PRK09453 phosphodiesterase; Pr 99.3 9.3E-11 2E-15 98.1 15.7 67 16-86 3-77 (182)
35 PF12850 Metallophos_2: Calcin 99.3 9.8E-11 2.1E-15 94.5 14.1 151 16-244 3-153 (156)
36 TIGR00040 yfcE phosphoesterase 99.3 1.3E-10 2.8E-15 95.0 14.1 61 16-85 3-64 (158)
37 cd07388 MPP_Tt1561 Thermus the 99.2 4.8E-10 1E-14 96.9 16.2 69 16-85 7-75 (224)
38 cd07379 MPP_239FB Homo sapiens 99.2 1.3E-10 2.7E-15 92.6 10.6 117 16-213 2-120 (135)
39 cd07394 MPP_Vps29 Homo sapiens 99.1 6.9E-09 1.5E-13 86.7 15.7 58 16-85 2-65 (178)
40 cd07392 MPP_PAE1087 Pyrobaculu 99.0 2.5E-09 5.4E-14 88.9 11.7 65 16-86 1-66 (188)
41 cd07397 MPP_DevT Myxococcus xa 99.0 3.1E-09 6.6E-14 92.4 11.1 62 16-87 3-65 (238)
42 cd07404 MPP_MS158 Microscilla 99.0 1.4E-09 3E-14 89.5 8.1 66 17-85 2-68 (166)
43 cd00838 MPP_superfamily metall 99.0 5.9E-09 1.3E-13 80.3 11.1 116 18-213 2-119 (131)
44 COG0639 ApaH Diadenosine tetra 98.9 1E-09 2.2E-14 87.0 5.3 143 87-230 3-154 (155)
45 PRK05340 UDP-2,3-diacylglucosa 98.9 7.3E-08 1.6E-12 84.2 14.7 203 17-246 4-232 (241)
46 COG2129 Predicted phosphoester 98.8 8.7E-07 1.9E-11 75.6 17.9 203 14-245 5-217 (226)
47 TIGR01854 lipid_A_lpxH UDP-2,3 98.8 8.5E-08 1.8E-12 83.3 12.1 203 17-245 2-229 (231)
48 cd07403 MPP_TTHA0053 Thermus t 98.8 7.6E-08 1.7E-12 76.2 10.5 106 18-213 2-107 (129)
49 cd07400 MPP_YydB Bacillus subt 98.7 1.8E-07 3.8E-12 74.8 11.7 117 16-213 1-129 (144)
50 TIGR03729 acc_ester putative p 98.7 2E-07 4.4E-12 81.2 12.9 67 16-85 2-74 (239)
51 cd07399 MPP_YvnB Bacillus subt 98.6 3.8E-06 8.2E-11 72.2 16.5 68 16-84 3-81 (214)
52 COG0622 Predicted phosphoester 98.6 4.6E-06 1E-10 69.2 15.9 156 16-255 4-165 (172)
53 cd07383 MPP_Dcr2 Saccharomyces 98.5 6.7E-06 1.5E-10 69.6 14.8 68 16-83 5-87 (199)
54 cd07395 MPP_CSTP1 Homo sapiens 98.5 6E-06 1.3E-10 72.8 14.6 70 16-85 7-99 (262)
55 cd07396 MPP_Nbla03831 Homo sap 98.4 1.4E-05 3E-10 70.9 16.4 72 16-87 3-88 (267)
56 PRK11148 cyclic 3',5'-adenosin 98.4 1.2E-05 2.7E-10 71.5 16.1 68 16-85 17-98 (275)
57 cd07402 MPP_GpdQ Enterobacter 98.4 4.3E-06 9.2E-11 72.4 12.3 68 16-85 2-83 (240)
58 PRK11340 phosphodiesterase Yae 98.4 9.1E-07 2E-11 78.7 7.3 68 16-85 52-125 (271)
59 cd07398 MPP_YbbF-LpxH Escheric 98.3 2.2E-06 4.8E-11 73.0 8.6 69 17-86 1-83 (217)
60 cd07385 MPP_YkuE_C Bacillus su 98.3 1.2E-06 2.7E-11 75.0 6.7 69 16-86 4-77 (223)
61 cd07393 MPP_DR1119 Deinococcus 98.3 8.6E-06 1.9E-10 70.8 11.9 68 16-85 1-84 (232)
62 COG2908 Uncharacterized protei 98.3 6.3E-06 1.4E-10 71.0 9.8 198 18-248 2-230 (237)
63 cd07391 MPP_PF1019 Pyrococcus 98.3 2.4E-06 5.2E-11 70.8 7.1 58 29-86 30-89 (172)
64 PRK04036 DNA polymerase II sma 98.3 1.5E-05 3.4E-10 76.9 13.5 109 16-132 246-387 (504)
65 cd08165 MPP_MPPE1 human MPPE1 98.1 3.1E-05 6.8E-10 63.3 10.6 48 39-86 37-90 (156)
66 cd07401 MPP_TMEM62_N Homo sapi 98.1 1.2E-05 2.6E-10 71.0 8.1 71 16-86 2-90 (256)
67 COG1409 Icc Predicted phosphoh 98.1 9.4E-05 2E-09 65.4 13.4 71 16-88 3-81 (301)
68 TIGR00619 sbcd exonuclease Sbc 98.0 1.6E-05 3.4E-10 70.2 7.3 70 17-86 4-89 (253)
69 cd07390 MPP_AQ1575 Aquifex aeo 98.0 2.1E-05 4.6E-10 64.9 7.6 66 17-87 2-84 (168)
70 PHA02546 47 endonuclease subun 97.9 2.8E-05 6E-10 71.5 7.1 70 17-86 4-90 (340)
71 cd00839 MPP_PAPs purple acid p 97.9 0.00018 3.9E-09 64.3 12.0 68 16-87 7-83 (294)
72 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.9 3.5E-05 7.7E-10 68.2 7.0 70 16-85 1-86 (262)
73 cd00840 MPP_Mre11_N Mre11 nucl 97.8 3.5E-05 7.5E-10 65.7 6.2 73 16-88 2-92 (223)
74 TIGR00024 SbcD_rel_arch putati 97.8 8.5E-05 1.8E-09 64.4 7.4 69 13-86 15-103 (225)
75 PF06874 FBPase_2: Firmicute f 97.8 0.00037 7.9E-09 67.6 12.1 42 41-87 185-226 (640)
76 cd07384 MPP_Cdc1_like Saccharo 97.7 0.00049 1.1E-08 57.1 10.0 49 38-86 43-101 (171)
77 cd07380 MPP_CWF19_N Schizosacc 97.6 0.00082 1.8E-08 54.6 10.7 119 17-208 1-121 (150)
78 TIGR00583 mre11 DNA repair pro 97.6 0.00019 4.1E-09 67.4 7.8 70 17-86 7-124 (405)
79 PF14582 Metallophos_3: Metall 97.6 0.00023 5E-09 61.1 7.5 71 16-86 8-103 (255)
80 PRK10966 exonuclease subunit S 97.4 0.00026 5.7E-09 66.6 6.4 69 17-86 4-88 (407)
81 COG1408 Predicted phosphohydro 97.4 0.00035 7.7E-09 62.6 6.9 71 16-88 47-121 (284)
82 cd07386 MPP_DNA_pol_II_small_a 97.4 0.00052 1.1E-08 59.9 7.6 68 17-86 2-95 (243)
83 COG0420 SbcD DNA repair exonuc 97.3 0.00066 1.4E-08 63.4 6.8 72 17-88 4-91 (390)
84 COG1311 HYS2 Archaeal DNA poly 97.1 0.0061 1.3E-07 57.6 11.5 206 17-245 229-461 (481)
85 cd08166 MPP_Cdc1_like_1 unchar 97.0 0.0013 2.9E-08 55.6 5.6 47 39-85 41-93 (195)
86 COG4186 Predicted phosphoester 96.9 0.0043 9.4E-08 50.3 7.5 67 16-86 6-87 (186)
87 cd08163 MPP_Cdc1 Saccharomyces 96.9 0.012 2.6E-07 52.0 11.2 24 184-207 203-226 (257)
88 cd00845 MPP_UshA_N_like Escher 96.9 0.0017 3.8E-08 56.6 5.7 65 16-85 3-82 (252)
89 KOG3325 Membrane coat complex 96.7 0.064 1.4E-06 43.2 12.6 163 16-266 3-182 (183)
90 COG1407 Predicted ICC-like pho 96.7 0.007 1.5E-07 52.5 7.6 99 13-135 20-140 (235)
91 cd07410 MPP_CpdB_N Escherichia 96.4 0.005 1.1E-07 54.7 5.0 65 16-85 3-95 (277)
92 cd08164 MPP_Ted1 Saccharomyces 96.2 0.012 2.5E-07 49.8 6.0 65 21-85 24-111 (193)
93 KOG0376 Serine-threonine phosp 96.1 0.0003 6.5E-09 66.1 -4.4 211 17-231 49-299 (476)
94 PLN02533 probable purple acid 96.1 0.009 1.9E-07 56.7 5.4 68 16-86 142-212 (427)
95 cd07378 MPP_ACP5 Homo sapiens 95.9 0.022 4.7E-07 50.4 6.4 69 16-85 3-83 (277)
96 cd07408 MPP_SA0022_N Staphyloc 95.7 0.021 4.6E-07 50.2 5.6 65 16-85 3-82 (257)
97 cd07387 MPP_PolD2_C PolD2 (DNA 95.6 0.81 1.7E-05 40.5 15.3 48 198-250 204-254 (257)
98 cd07412 MPP_YhcR_N Bacillus su 94.9 0.062 1.3E-06 48.2 6.1 65 16-85 3-88 (288)
99 cd07411 MPP_SoxB_N Thermus the 94.6 0.072 1.6E-06 47.1 5.7 64 16-85 3-95 (264)
100 KOG1432 Predicted DNA repair e 94.3 0.14 3E-06 46.7 6.7 50 38-87 98-149 (379)
101 PRK09419 bifunctional 2',3'-cy 93.7 0.1 2.2E-06 55.6 5.5 64 16-84 663-735 (1163)
102 cd07406 MPP_CG11883_N Drosophi 93.7 0.15 3.2E-06 45.0 5.7 63 17-84 4-82 (257)
103 cd07409 MPP_CD73_N CD73 ecto-5 93.6 0.18 3.8E-06 45.1 6.1 65 16-85 3-94 (281)
104 cd00842 MPP_ASMase acid sphing 93.5 0.15 3.3E-06 45.5 5.6 70 19-88 43-125 (296)
105 KOG3662 Cell division control 92.8 0.19 4.1E-06 47.1 5.1 45 40-84 93-143 (410)
106 PF04042 DNA_pol_E_B: DNA poly 92.2 0.3 6.4E-06 41.3 5.3 72 16-87 1-93 (209)
107 KOG2863 RNA lariat debranching 91.8 0.42 9.1E-06 43.9 5.9 70 17-86 4-89 (456)
108 KOG1378 Purple acid phosphatas 91.1 0.81 1.8E-05 43.4 7.3 33 188-220 323-355 (452)
109 cd07405 MPP_UshA_N Escherichia 90.3 0.47 1E-05 42.5 4.8 65 16-85 3-87 (285)
110 cd07407 MPP_YHR202W_N Saccharo 89.8 0.51 1.1E-05 42.3 4.7 65 16-85 8-97 (282)
111 COG0737 UshA 5'-nucleotidase/2 89.8 0.48 1E-05 46.0 4.9 66 16-86 29-116 (517)
112 cd08162 MPP_PhoA_N Synechococc 89.7 0.67 1.4E-05 42.2 5.4 64 16-84 3-90 (313)
113 KOG3339 Predicted glycosyltran 89.6 4 8.6E-05 34.3 9.2 85 42-131 40-140 (211)
114 COG1768 Predicted phosphohydro 88.3 2.2 4.7E-05 35.8 6.9 77 38-125 41-119 (230)
115 KOG2476 Uncharacterized conser 87.7 1.6 3.4E-05 41.5 6.4 69 12-82 5-75 (528)
116 PRK09419 bifunctional 2',3'-cy 87.0 0.91 2E-05 48.6 5.1 64 16-84 44-138 (1163)
117 TIGR01390 CycNucDiestase 2',3' 87.0 0.97 2.1E-05 45.1 5.0 64 17-85 6-99 (626)
118 COG3855 Fbp Uncharacterized pr 87.0 0.46 9.9E-06 45.0 2.5 41 42-87 192-232 (648)
119 PRK09420 cpdB bifunctional 2', 86.7 1.1 2.3E-05 45.0 5.1 64 17-85 29-122 (649)
120 TIGR00282 metallophosphoestera 86.1 2 4.3E-05 38.2 6.0 65 16-85 3-71 (266)
121 PRK11907 bifunctional 2',3'-cy 85.2 1.4 3.1E-05 45.2 5.2 64 17-85 119-213 (814)
122 KOG0918 Selenium-binding prote 84.2 0.033 7.1E-07 51.6 -6.3 192 42-245 49-250 (476)
123 TIGR01530 nadN NAD pyrophospha 82.8 2.6 5.7E-05 41.3 5.8 64 17-85 4-94 (550)
124 cd07382 MPP_DR1281 Deinococcus 81.5 4.1 8.8E-05 36.0 6.0 65 16-85 2-70 (255)
125 PTZ00235 DNA polymerase epsilo 81.0 7.6 0.00016 34.9 7.5 71 16-86 30-123 (291)
126 PTZ00422 glideosome-associated 80.3 3.7 7.9E-05 38.6 5.5 69 17-85 30-109 (394)
127 PRK09558 ushA bifunctional UDP 80.2 2.3 5E-05 41.7 4.3 65 16-85 37-121 (551)
128 KOG2310 DNA repair exonuclease 76.0 9.3 0.0002 37.2 6.8 52 14-66 15-78 (646)
129 PRK09418 bifunctional 2',3'-cy 74.2 5.4 0.00012 40.9 5.1 63 17-84 43-141 (780)
130 KOG3947 Phosphoesterases [Gene 73.9 5.6 0.00012 35.5 4.5 63 17-87 65-128 (305)
131 PF02875 Mur_ligase_C: Mur lig 56.7 50 0.0011 23.6 6.2 66 17-82 15-82 (91)
132 PF06874 FBPase_2: Firmicute f 52.2 12 0.00026 37.1 2.7 69 185-255 507-585 (640)
133 PF15007 CEP44: Centrosomal sp 48.4 13 0.00028 29.4 1.9 85 21-119 1-87 (131)
134 PF12641 Flavodoxin_3: Flavodo 47.3 1E+02 0.0022 25.1 7.2 102 17-137 2-116 (160)
135 PF09949 DUF2183: Uncharacteri 41.5 84 0.0018 23.5 5.3 43 27-78 53-95 (100)
136 PRK10773 murF UDP-N-acetylmura 40.8 1.3E+02 0.0029 28.5 8.0 66 13-80 325-392 (453)
137 PF13258 DUF4049: Domain of un 40.2 31 0.00068 30.2 3.1 85 43-136 87-187 (318)
138 PF04263 TPK_catalytic: Thiami 32.5 1.8E+02 0.0039 22.5 6.1 63 14-78 37-121 (123)
139 PF08497 Radical_SAM_N: Radica 30.7 75 0.0016 28.7 4.1 34 33-66 9-43 (302)
140 TIGR00282 metallophosphoestera 28.5 43 0.00093 29.8 2.2 39 43-85 2-41 (266)
141 COG1692 Calcineurin-like phosp 27.7 60 0.0013 28.6 2.9 9 17-25 4-12 (266)
142 smart00854 PGA_cap Bacterial c 26.5 1.3E+02 0.0028 25.8 4.8 40 189-230 197-236 (239)
143 COG3855 Fbp Uncharacterized pr 24.9 34 0.00074 32.9 0.9 56 186-242 515-580 (648)
144 COG4320 Uncharacterized protei 24.6 96 0.0021 28.6 3.7 49 13-69 56-108 (410)
145 KOG3425 Uncharacterized conser 23.9 2.9E+02 0.0062 21.7 5.7 59 26-85 12-79 (128)
146 cd07382 MPP_DR1281 Deinococcus 23.7 66 0.0014 28.3 2.5 37 43-80 1-37 (255)
147 PRK00955 hypothetical protein; 23.4 1.1E+02 0.0023 30.8 4.1 34 33-66 6-40 (620)
148 PRK01254 hypothetical protein; 23.0 1.8E+02 0.0038 29.6 5.5 35 32-66 31-66 (707)
149 COG4119 Predicted NTP pyrophos 22.3 1.7E+02 0.0037 23.1 4.2 37 188-227 55-91 (161)
150 KOG3770 Acid sphingomyelinase 20.9 2.4E+02 0.0052 28.0 5.8 64 26-89 194-267 (577)
151 PF05413 Peptidase_C34: Putati 20.5 47 0.001 23.9 0.8 10 74-83 79-88 (92)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-75 Score=490.44 Aligned_cols=255 Identities=49% Similarity=0.966 Sum_probs=247.2
Q ss_pred CcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccc
Q 024423 5 KFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 84 (268)
Q Consensus 5 ~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 84 (268)
+++++++..|+ +|+|||||++.||..+|+..|.+++.+|+|||||||||-.|+|++.+|+.||++||++|.+||||||.
T Consensus 35 E~NV~~i~tPv-tvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEs 113 (303)
T KOG0372|consen 35 ESNVQRIDTPV-TVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHES 113 (303)
T ss_pred CCCceecCCCc-EEeecccchHHHHHHHHHhCCCCCCCceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchh
Confidence 56899999998 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhccchhHHHHHhh-HHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhh
Q 024423 85 ASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 163 (268)
Q Consensus 85 ~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW 163 (268)
+.+++.|||++||.++|+ ..+|+...+.|+.||++|++++++||||||++|++.+++||+.+.|..++|..+.++|++|
T Consensus 114 RqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllW 193 (303)
T KOG0372|consen 114 RQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLW 193 (303)
T ss_pred hhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheec
Confidence 999999999999999995 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEEc
Q 024423 164 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSID 243 (268)
Q Consensus 164 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~ 243 (268)
|||... .+|.-++||+|+.||.+++++|++.||++.|+|+||.+.+||++.++++|+|||||||||+...|.||||.++
T Consensus 194 SDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~ld 272 (303)
T KOG0372|consen 194 SDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELD 272 (303)
T ss_pred cCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeec
Confidence 999864 6999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEccCccccc
Q 024423 244 EELVCSFQILKPAEKKVK 261 (268)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~ 261 (268)
++..-.|.+++.+++..+
T Consensus 273 e~~~~~F~vFeaa~~~~~ 290 (303)
T KOG0372|consen 273 EDLDKDFRVFEAAPQESR 290 (303)
T ss_pred cccCcceEeeecchhhhc
Confidence 999999999998887665
No 2
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3.7e-71 Score=498.48 Aligned_cols=252 Identities=73% Similarity=1.325 Sum_probs=246.6
Q ss_pred CCcceeecCCCeEEEEecCCCCHHHHHHHHHhcC-CCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCc
Q 024423 4 PKFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGG-YPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 82 (268)
Q Consensus 4 ~~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~-~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 82 (268)
..++++++++|+ .|+|||||++.+|.++|+..| +|++++|||||||||||++|+|++.+|+++|++||++++++||||
T Consensus 50 ~~~~l~e~~aPV-~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNH 128 (331)
T KOG0374|consen 50 SQPTLLELSAPV-KIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNH 128 (331)
T ss_pred CCCceeecCCCE-EEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEecccc
Confidence 357889999998 999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred cccchhhhccchhHHHHHhh-HHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHh
Q 024423 83 ECASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDL 161 (268)
Q Consensus 83 E~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~l 161 (268)
|.+.++..|||++||.++|+ ..+|+++++.|..||++|+++++++|+|||++|.+.++++++.+.||.+.++.++++|+
T Consensus 129 E~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DL 208 (331)
T KOG0374|consen 129 ECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDL 208 (331)
T ss_pred ccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeee
Confidence 99999999999999999998 69999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEE
Q 024423 162 LWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMS 241 (268)
Q Consensus 162 lWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~ 241 (268)
+|+||.....+|.+|.||.++.||++++++||+++++++||||||++++||+++.++|++||||||+||++++|.||+|.
T Consensus 209 lWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~ 288 (331)
T KOG0374|consen 209 LWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMR 288 (331)
T ss_pred eecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEE
Confidence 99999998899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCceEEEEEEccC
Q 024423 242 IDEELVCSFQILKPA 256 (268)
Q Consensus 242 i~~~~~~~~~~~~~~ 256 (268)
|++++.|+|++++|.
T Consensus 289 Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 289 VDKNLKCSFVILRPE 303 (331)
T ss_pred ECCCCeEEEEEeccc
Confidence 999999999999995
No 3
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=6.4e-70 Score=488.88 Aligned_cols=258 Identities=79% Similarity=1.412 Sum_probs=247.9
Q ss_pred CCcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 4 PKFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 4 ~~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
.++++++++.|+ +||||||||+.+|.++|+..++++.+++||||||||||++|+|++.+++++|+.+|.++++||||||
T Consensus 50 ~ep~ll~i~~~i-~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE 128 (320)
T PTZ00480 50 SQPILLELEAPL-KICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 128 (320)
T ss_pred hCCceEecCCCe-EEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccc
Confidence 357889999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhh
Q 024423 84 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 163 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW 163 (268)
.+.++..|||..|+..+|...+|+.+.++|+.||++|++++++|||||||+|...++++++++.||.+.++.+++.|++|
T Consensus 129 ~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllW 208 (320)
T PTZ00480 129 CASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLW 208 (320)
T ss_pred hhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEEc
Q 024423 164 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSID 243 (268)
Q Consensus 164 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~ 243 (268)
|||.....+|.+++||.|++||++++++||++|++++||||||++++||++.++++|+||||||+||+..+|+||++.|+
T Consensus 209 SDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~ 288 (320)
T PTZ00480 209 SDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTID 288 (320)
T ss_pred cCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEEC
Confidence 99998778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEccCcccccc
Q 024423 244 EELVCSFQILKPAEKKVKF 262 (268)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~ 262 (268)
+++++.|++++|.+....-
T Consensus 289 ~~~~~~~~~~~p~~~~~~~ 307 (320)
T PTZ00480 289 ESLMCSFQILKPAEQGQGA 307 (320)
T ss_pred CCCcEeEEEecCCcccccc
Confidence 9999999999988776443
No 4
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=3e-69 Score=481.42 Aligned_cols=251 Identities=63% Similarity=1.167 Sum_probs=241.9
Q ss_pred CCcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 4 PKFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 4 ~~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
.++++++++.|+ +|+||||||+.+|.++|+..++++.++++|||||||||++|+|++.+++++|+.+|.+++++|||||
T Consensus 43 ~e~~ll~i~~p~-~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 121 (294)
T PTZ00244 43 SQPMLLEIRPPV-RVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHE 121 (294)
T ss_pred hCCCeEeccCCc-eeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccc
Confidence 357899999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhh
Q 024423 84 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 163 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW 163 (268)
.+.++..|||.+++..+|+.++|+.+.++|+.||++++++++++|||||++|.+.+++++++++||.+.++.+++.|++|
T Consensus 122 ~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllW 201 (294)
T PTZ00244 122 CASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLW 201 (294)
T ss_pred hHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEEc
Q 024423 164 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSID 243 (268)
Q Consensus 164 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~ 243 (268)
|||.....+|.+++||.|++||++++++||++|++++||||||++++||+++++++|+|||||||||+..+|+||+|.|+
T Consensus 202 sDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~ 281 (294)
T PTZ00244 202 ADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNID 281 (294)
T ss_pred cCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEEC
Confidence 99998778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEcc
Q 024423 244 EELVCSFQILKP 255 (268)
Q Consensus 244 ~~~~~~~~~~~~ 255 (268)
++..+.|.+++.
T Consensus 282 ~~~~~~f~~~~~ 293 (294)
T PTZ00244 282 DKLQCSFLIIPA 293 (294)
T ss_pred CCCcEeEEEeec
Confidence 999999988764
No 5
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=5.8e-69 Score=480.09 Aligned_cols=252 Identities=81% Similarity=1.467 Sum_probs=243.8
Q ss_pred CCcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 4 PKFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 4 ~~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
.++++++++.|+ +||||||||+.+|.++|+..++++.+++||||||||||++|+|++.+++++|+.+|.++++||||||
T Consensus 41 ~ep~~l~i~~~i-~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE 119 (293)
T cd07414 41 SQPILLELEAPL-KICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 119 (293)
T ss_pred hCCCeEecCCce-EEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccc
Confidence 357889999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhh
Q 024423 84 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 163 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW 163 (268)
.+.++..+||.+|+..+|+.++|+.+.++|++||++++++++++|||||++|...+++++++++||.+.+..+++.+++|
T Consensus 120 ~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllW 199 (293)
T cd07414 120 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLW 199 (293)
T ss_pred hhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEEc
Q 024423 164 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSID 243 (268)
Q Consensus 164 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~ 243 (268)
|||.....+|.+++||.++.||++++++||++||+++||||||++++||+++++++|+||||||+||+..+|+||+|.|+
T Consensus 200 sDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~ 279 (293)
T cd07414 200 SDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVD 279 (293)
T ss_pred cCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEEC
Confidence 99998778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEccC
Q 024423 244 EELVCSFQILKPA 256 (268)
Q Consensus 244 ~~~~~~~~~~~~~ 256 (268)
+++++.|++++|.
T Consensus 280 ~~~~~~~~~~~~~ 292 (293)
T cd07414 280 ETLMCSFQILKPA 292 (293)
T ss_pred CCCcEEEEEecCC
Confidence 9999999999875
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.5e-68 Score=480.73 Aligned_cols=247 Identities=36% Similarity=0.638 Sum_probs=225.5
Q ss_pred CcceeecCC----CeEEEEecCCCCHHHHHHHHHhcCCCC-CceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEec
Q 024423 5 KFLLFNFTK----PLFVFAGDVHGQYSDLLRLFEYGGYPP-KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 79 (268)
Q Consensus 5 ~~~~l~~~~----p~i~viGDiHG~~~~l~~~l~~~~~~~-~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lr 79 (268)
++++++++. |+ +||||||||+.+|.++|+..++++ .+++||||||||||++|+||+.++++||+.+|.++++||
T Consensus 39 ep~vl~i~~~~~~~~-~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llR 117 (321)
T cd07420 39 LPNISRVSTSISKQV-TICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNR 117 (321)
T ss_pred CCCEEEecCCCCCCe-EEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEec
Confidence 567888876 78 999999999999999999999885 468999999999999999999999999999999999999
Q ss_pred CCccccchhhhccchhHHHHHhh---HHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCC-----
Q 024423 80 GNHECASINRIYGFYDECKRRFN---VRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTA----- 151 (268)
Q Consensus 80 GNHE~~~~~~~~~f~~e~~~~~~---~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~----- 151 (268)
||||.+.++..|||.+|+..+|+ .++|+.+.++|+.||++|++++++|||||||+| ..++++|++++|+..
T Consensus 118 GNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~ 196 (321)
T cd07420 118 GNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLR 196 (321)
T ss_pred CchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccC
Confidence 99999999999999999999996 789999999999999999999999999999997 568899998877421
Q ss_pred CCC----------------------chhHhHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeec
Q 024423 152 VPD----------------------TGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVE 209 (268)
Q Consensus 152 ~~~----------------------~~~~~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~ 209 (268)
.+. .+++.|+|||||......|.+++||.|+.||++++++||++|++++||||||+++
T Consensus 197 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~ 276 (321)
T cd07420 197 PPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKP 276 (321)
T ss_pred CCccccccccccccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhh
Confidence 011 1467899999998765557778999999999999999999999999999999999
Q ss_pred cCeEEecCceEEEEecCCCCCCCCCCcEEEEEEcCCceEEEEEE
Q 024423 210 DGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQIL 253 (268)
Q Consensus 210 ~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~ 253 (268)
+||++.++++|+|||||||||+..+|+||+|.+++++++.|+++
T Consensus 277 ~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~ 320 (321)
T cd07420 277 EGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQY 320 (321)
T ss_pred cceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEe
Confidence 99999999999999999999999899999999999999888765
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.1e-68 Score=476.67 Aligned_cols=252 Identities=52% Similarity=0.991 Sum_probs=241.5
Q ss_pred CCcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 4 PKFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 4 ~~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
.++++++++.|+ +|+||||||+.+|.++|+..++++.+++||||||||||++|+|++.+++++|+.+|.+++++|||||
T Consensus 33 ~e~~~~~i~~~i-~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 111 (285)
T cd07415 33 KESNVQRVRSPV-TVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHE 111 (285)
T ss_pred hCCCEEecCCCE-EEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccc
Confidence 357789999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhccchhHHHHHhh-HHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhh
Q 024423 84 CASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLL 162 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~ll 162 (268)
.+.++..|||.+|+..+|+ ..+|+.+.++|++||++|+++++++|||||++|...+++++++++||.+.+..+.+.|++
T Consensus 112 ~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dll 191 (285)
T cd07415 112 SRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLL 191 (285)
T ss_pred hHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceE
Confidence 9999999999999999997 489999999999999999999999999999999999999999999999988889999999
Q ss_pred hcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEE
Q 024423 163 WSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSI 242 (268)
Q Consensus 163 Wsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i 242 (268)
||||... .+|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.|
T Consensus 192 WsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i 270 (285)
T cd07415 192 WSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMEL 270 (285)
T ss_pred ecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEE
Confidence 9999865 789999999999999999999999999999999999999999999999999999999999989999999999
Q ss_pred cCCceEEEEEEccCc
Q 024423 243 DEELVCSFQILKPAE 257 (268)
Q Consensus 243 ~~~~~~~~~~~~~~~ 257 (268)
+++.++.+.+++|.+
T Consensus 271 ~~~~~~~~~~~~~~~ 285 (285)
T cd07415 271 DEHLKRSFKVFEAAP 285 (285)
T ss_pred CCCCcEeEEEeccCC
Confidence 999999999998864
No 8
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1.1e-67 Score=468.04 Aligned_cols=252 Identities=59% Similarity=1.080 Sum_probs=242.9
Q ss_pred CCcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 4 PKFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 4 ~~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
.++++++++.|+ +||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.+++++|+.+|.+++++|||||
T Consensus 19 ~e~~~~~i~~~i-~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~~~p~~v~llrGNHE 97 (271)
T smart00156 19 QEPNLVEVSAPV-TVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFALKILYPNRVVLLRGNHE 97 (271)
T ss_pred hCCCeEEeCCCE-EEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 357889999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhh
Q 024423 84 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 163 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW 163 (268)
.+.++..|||.+|+..+|+.++|+.+.++|+.||++++++++++|||||++|...+++++++++||...+..+.+.+++|
T Consensus 98 ~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dllW 177 (271)
T smart00156 98 SRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKLKRPQEPPDEGLLIDLLW 177 (271)
T ss_pred HHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcccCCCCCCchhhhhheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred cCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEEc
Q 024423 164 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSID 243 (268)
Q Consensus 164 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~ 243 (268)
|||.....+|.+|+||.++.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||++.++
T Consensus 178 sDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~~~i~ 257 (271)
T smart00156 178 SDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSAPNYCGRFGNKAAVLKVD 257 (271)
T ss_pred cCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECCcccccCCCceEEEEEEC
Confidence 99987778999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred CCceEEEEEEccC
Q 024423 244 EELVCSFQILKPA 256 (268)
Q Consensus 244 ~~~~~~~~~~~~~ 256 (268)
++.++.+.+++|.
T Consensus 258 ~~~~~~~~~~~~~ 270 (271)
T smart00156 258 KDLKLSFEQFKPG 270 (271)
T ss_pred CCCcEEEEEecCC
Confidence 9999999988864
No 9
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1e-67 Score=473.02 Aligned_cols=255 Identities=45% Similarity=0.913 Sum_probs=241.5
Q ss_pred CCcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 4 PKFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 4 ~~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
.+++++++++|+ +|+||||||+.+|.++|+..+.++.++++|||||||||++|+|++.+++++|+.+|.+++++|||||
T Consensus 34 ~e~~~~~i~~~i-~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 112 (303)
T PTZ00239 34 EESNVQPVRAPV-NVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHE 112 (303)
T ss_pred hCCCeEecCCCE-EEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccc
Confidence 357889999998 9999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred ccchhhhccchhHHHHHhh-HHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhh
Q 024423 84 CASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLL 162 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~ll 162 (268)
.+.++..|||.+|+..+|+ ..+|+.+.++|+.||++++++++++|||||++|...++++++.+.||.+.+..+.+.|++
T Consensus 113 ~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dll 192 (303)
T PTZ00239 113 SRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLM 192 (303)
T ss_pred hHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeE
Confidence 9999999999999999996 478999999999999999999999999999999999999999999999999899999999
Q ss_pred hcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecC-ceEEEEecCCCCCCCCCCcEEEEE
Q 024423 163 WSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFAD-RQLVTIFSAPNYCGEFDNAGAMMS 241 (268)
Q Consensus 163 Wsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~-~~~itifSa~~y~~~~~n~ga~l~ 241 (268)
||||.. ..+|.+++||.|++||++++++||++|++++||||||++++||++.++ ++|+|||||||||+..+|+||++.
T Consensus 193 WsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~ 271 (303)
T PTZ00239 193 WSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILC 271 (303)
T ss_pred ecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEE
Confidence 999984 468999999999999999999999999999999999999999998765 459999999999999999999999
Q ss_pred EcCCceEEEEEEccCcccc
Q 024423 242 IDEELVCSFQILKPAEKKV 260 (268)
Q Consensus 242 i~~~~~~~~~~~~~~~~~~ 260 (268)
++++.++.|.+++|.+.+.
T Consensus 272 i~~~~~~~~~~~~~~~~~~ 290 (303)
T PTZ00239 272 LDENLQQTWKTFKEVPESA 290 (303)
T ss_pred ECCCCcEeeEEeeCCCccc
Confidence 9999999999999988764
No 10
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1.4e-66 Score=467.37 Aligned_cols=253 Identities=43% Similarity=0.835 Sum_probs=237.7
Q ss_pred CCcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 4 PKFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 4 ~~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
.++++++++.|+ +||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.+++++|+.+|.++++||||||
T Consensus 34 ~e~~l~~i~~~i-~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE 112 (305)
T cd07416 34 QEPNLLRIEAPV-TVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHE 112 (305)
T ss_pred hCCCeEccCCCE-EEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCc
Confidence 357889999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhh
Q 024423 84 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 163 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW 163 (268)
.+.++..|||..++..+|..++|+.+.++|++||++++++++++|||||++|.+.+++++++++||.+.+..+++.|++|
T Consensus 113 ~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllW 192 (305)
T cd07416 113 CRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLW 192 (305)
T ss_pred HHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCCEEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888899999999
Q ss_pred cCCCCCCC------Ccccc-CCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCc------eEEEEecCCCCC
Q 024423 164 SDPGRDVK------GWGMN-DRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADR------QLVTIFSAPNYC 230 (268)
Q Consensus 164 sdp~~~~~------~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~------~~itifSa~~y~ 230 (268)
|||..... .|.++ +||.++.||++++++||++|++++||||||++++||++++++ +|+|||||||||
T Consensus 193 sDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~ 272 (305)
T cd07416 193 SDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYL 272 (305)
T ss_pred cCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCcccc
Confidence 99975432 46665 899999999999999999999999999999999999998876 899999999999
Q ss_pred CCCCCcEEEEEEcCCceEEEEEEccCcc
Q 024423 231 GEFDNAGAMMSIDEELVCSFQILKPAEK 258 (268)
Q Consensus 231 ~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 258 (268)
+..+|+||++.++++. ..++++++.+.
T Consensus 273 ~~~~N~~a~l~i~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 273 DVYNNKAAVLKYENNV-MNIRQFNCSPH 299 (305)
T ss_pred CCCCceEEEEEEcCCc-ceEEEecCCCC
Confidence 9999999999999985 68899988765
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=7.6e-67 Score=470.28 Aligned_cols=252 Identities=44% Similarity=0.830 Sum_probs=236.1
Q ss_pred CcceeecCCC----eEEEEecCCCCHHHHHHHHHhcCCCCC-ceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEec
Q 024423 5 KFLLFNFTKP----LFVFAGDVHGQYSDLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 79 (268)
Q Consensus 5 ~~~~l~~~~p----~i~viGDiHG~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lr 79 (268)
++++++++.| + +||||||||+.+|.++|+..++++. +++||||||||||++|+|++.+++++|+.+|.++++||
T Consensus 48 ep~l~~i~~p~~~~~-~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLR 126 (316)
T cd07417 48 LPSLVEITIPEGEKI-TVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNR 126 (316)
T ss_pred CCcceeccCCCCcee-EEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEe
Confidence 4678888766 7 9999999999999999999998765 57999999999999999999999999999999999999
Q ss_pred CCccccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCC-CCCCCcHHhhhcCCCCCCCCCchhH
Q 024423 80 GNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGL-SPDLSHLDQIRNLPRPTAVPDTGLL 158 (268)
Q Consensus 80 GNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~ 158 (268)
||||.+.++..|||..|+..+|..++|+.+.++|+.||++++++++++|||||+ +|...+++++++++|+.+.+..+++
T Consensus 127 GNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~ 206 (316)
T cd07417 127 GNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLM 206 (316)
T ss_pred eccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccc
Confidence 999999999999999999999999999999999999999999999999999999 4567899999999999888888999
Q ss_pred hHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEE
Q 024423 159 CDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGA 238 (268)
Q Consensus 159 ~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga 238 (268)
.|++||||... .+|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||
T Consensus 207 ~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga 285 (316)
T cd07417 207 CELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGA 285 (316)
T ss_pred eeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceE
Confidence 99999999864 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcC-CceEEEEEEccCcc
Q 024423 239 MMSIDE-ELVCSFQILKPAEK 258 (268)
Q Consensus 239 ~l~i~~-~~~~~~~~~~~~~~ 258 (268)
++.|++ ++++.|++++|.+.
T Consensus 286 ~~~i~~~~~~~~~~~~~~~~~ 306 (316)
T cd07417 286 FIRITGSDLKPKFTQFEAVPH 306 (316)
T ss_pred EEEEeCCCceeeeEeccCCCC
Confidence 999999 89999999976544
No 12
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-68 Score=441.55 Aligned_cols=259 Identities=44% Similarity=0.898 Sum_probs=247.9
Q ss_pred CcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccc
Q 024423 5 KFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 84 (268)
Q Consensus 5 ~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 84 (268)
+.++.+++.|+ .|+|||||++.+|.++|+..|--|...|||+|||||||-.|+|+..+++.||.+||.++.+||||||.
T Consensus 38 EsNvqPV~tPV-TvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEs 116 (306)
T KOG0373|consen 38 ESNVQPVSTPV-TVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHES 116 (306)
T ss_pred hcCccccCCCe-eEeeccchhHHHHHHHHHhcCCCCCcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchh
Confidence 35788999998 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhccchhHHHHHhh-HHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhh
Q 024423 85 ASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 163 (268)
Q Consensus 85 ~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW 163 (268)
+.+...|||++||..+|+ ...|+...+.|+.|+++|+++++++|||||++|++.+++||+.+.|..++|..+..+|++|
T Consensus 117 RqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmW 196 (306)
T KOG0373|consen 117 RQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMW 196 (306)
T ss_pred hhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceec
Confidence 999999999999999995 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCce-EEEEecCCCCCCCCCCcEEEEEE
Q 024423 164 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQ-LVTIFSAPNYCGEFDNAGAMMSI 242 (268)
Q Consensus 164 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~-~itifSa~~y~~~~~n~ga~l~i 242 (268)
|||++ .+.|.-++||+|++||++.+.+|...|++++|.|+||.+++||++.+++| ++|||||||||+..+|.|++|.+
T Consensus 197 SDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~ 275 (306)
T KOG0373|consen 197 SDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSF 275 (306)
T ss_pred cChhh-hhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEe
Confidence 99986 68899999999999999999999999999999999999999999999988 99999999999999999999999
Q ss_pred cCCceEEEEEEccCccccccccc
Q 024423 243 DEELVCSFQILKPAEKKVKFMVS 265 (268)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~ 265 (268)
+++++.++.++...|...++.-.
T Consensus 276 d~~~~r~~k~F~avpd~~~~~p~ 298 (306)
T KOG0373|consen 276 DDNLERETKIFSAVPDNSRVIPP 298 (306)
T ss_pred cccCCccceeeeecCCccccCCC
Confidence 99999999999888877665433
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.5e-64 Score=456.02 Aligned_cols=250 Identities=47% Similarity=0.911 Sum_probs=231.5
Q ss_pred CcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCC--------ceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEE
Q 024423 5 KFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPK--------ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 76 (268)
Q Consensus 5 ~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~--------~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~ 76 (268)
++++++++.|+ +||||||||+++|.++|+..++++. .++|||||||||||+|+|++.+++++++.+|.+++
T Consensus 40 e~~~~~i~~~~-~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~ 118 (311)
T cd07419 40 EPMVLRLRAPI-KIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIH 118 (311)
T ss_pred CCCeEeeCCCE-EEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEE
Confidence 57789999998 9999999999999999999988754 57999999999999999999999999999999999
Q ss_pred EecCCccccchhhhccchhHHHHHhhH------HHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCC
Q 024423 77 LLRGNHECASINRIYGFYDECKRRFNV------RLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPT 150 (268)
Q Consensus 77 ~lrGNHE~~~~~~~~~f~~e~~~~~~~------~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~ 150 (268)
+||||||.+.++..+||..++..+++. .+|+.+.++|+.||++++++++++|||||++|...++++++++.||.
T Consensus 119 lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~ 198 (311)
T cd07419 119 LIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPL 198 (311)
T ss_pred EeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCC
Confidence 999999999999999999999888754 68999999999999999999999999999999999999999999997
Q ss_pred -CCCCchhHhHhhhcCCCCC--CCCccccC---CCce--eeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEE
Q 024423 151 -AVPDTGLLCDLLWSDPGRD--VKGWGMND---RGVS--YTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVT 222 (268)
Q Consensus 151 -~~~~~~~~~~llWsdp~~~--~~~~~~~~---rg~~--~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~it 222 (268)
..+..+.+.|++||||... ..+|.+++ ||.| +.||++++++||++||+++||||||++++||++.++++|+|
T Consensus 199 ~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iT 278 (311)
T cd07419 199 TMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLIT 278 (311)
T ss_pred CCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEE
Confidence 4455678899999999864 34666665 8888 79999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCCcEEEEEEcCCceEEEEEEcc
Q 024423 223 IFSAPNYCGEFDNAGAMMSIDEELVCSFQILKP 255 (268)
Q Consensus 223 ifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 255 (268)
|||||+||+..+|+||++.++++.++.+.+++|
T Consensus 279 vfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 279 LFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 999999999999999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2e-62 Score=447.28 Aligned_cols=254 Identities=37% Similarity=0.684 Sum_probs=222.6
Q ss_pred CcceeecC----CCeEEEEecCCCCHHHHHHHHHhcCCCCC-ceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEec
Q 024423 5 KFLLFNFT----KPLFVFAGDVHGQYSDLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 79 (268)
Q Consensus 5 ~~~~l~~~----~p~i~viGDiHG~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lr 79 (268)
++++++++ .|+ +||||||||+.+|.++|+..++++. +.+||||||||||++|+|++.+++++|+.+|.++++||
T Consensus 54 ep~ll~i~~~~~~~i-~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLR 132 (377)
T cd07418 54 EPNCVRIDVEDVCEV-VVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLR 132 (377)
T ss_pred CCCeEEecCCCCCCE-EEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEe
Confidence 57888887 788 9999999999999999999998875 45999999999999999999999999999999999999
Q ss_pred CCccccchhhhccchhHHHHHhh---HHHHHHhchhhhcCCeEEEEcCeEEEecCCCC----------------------
Q 024423 80 GNHECASINRIYGFYDECKRRFN---VRLWKAFTDCFNCLPVAALIDEKILCMHGGLS---------------------- 134 (268)
Q Consensus 80 GNHE~~~~~~~~~f~~e~~~~~~---~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~---------------------- 134 (268)
||||.+.++..|||.+++..+|+ ..+|+.+.++|++||++++++++++||||||+
T Consensus 133 GNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~ 212 (377)
T cd07418 133 GNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLE 212 (377)
T ss_pred eecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCccccccccccccccccccccc
Confidence 99999999999999999999985 47999999999999999999999999999994
Q ss_pred -----CCCCcHHhhhcCCCCC-CCCCch---hHhHhhhcCCCCCCCCcccc-CCCceeeeChhhHHHHHHhCCCceEEee
Q 024423 135 -----PDLSHLDQIRNLPRPT-AVPDTG---LLCDLLWSDPGRDVKGWGMN-DRGVSYTFGPDKVSEFLKRHDLDLVCRA 204 (268)
Q Consensus 135 -----p~~~~~~~i~~i~r~~-~~~~~~---~~~~llWsdp~~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIrg 204 (268)
|.+.++++|++++||. +.+..+ ++.|+|||||... .+|.++ +||.|+.||++++++||++|++++||||
T Consensus 213 ~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRs 291 (377)
T cd07418 213 PESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRS 291 (377)
T ss_pred ccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEC
Confidence 3456899999999974 444443 4689999999864 455555 7999999999999999999999999999
Q ss_pred eee------------eccCeEEecC---ceEEEEecCCCCC------CCCCCcEEEEEEcCCc--eEEEEE---EccCcc
Q 024423 205 HQV------------VEDGYEFFAD---RQLVTIFSAPNYC------GEFDNAGAMMSIDEEL--VCSFQI---LKPAEK 258 (268)
Q Consensus 205 H~~------------~~~G~~~~~~---~~~itifSa~~y~------~~~~n~ga~l~i~~~~--~~~~~~---~~~~~~ 258 (268)
||+ +++||++.++ ++|+||||||||| +.++|+||++.++.+. +.+|.+ .+|.|+
T Consensus 292 He~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (377)
T cd07418 292 HEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPK 371 (377)
T ss_pred CCCcccccccccchhhhCceEEeccCCCCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCC
Confidence 996 6799999876 8999999999999 5789999999997654 455544 456665
Q ss_pred cc
Q 024423 259 KV 260 (268)
Q Consensus 259 ~~ 260 (268)
..
T Consensus 372 ~~ 373 (377)
T cd07418 372 AN 373 (377)
T ss_pred CC
Confidence 43
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.2e-60 Score=420.51 Aligned_cols=256 Identities=42% Similarity=0.829 Sum_probs=235.7
Q ss_pred CCcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 4 PKFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 4 ~~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
.+++++++++|+ .|+|||||++.||.++|+..|.|.+.+|+|||||||||.+|+|++.+|.+||+.||...++||||||
T Consensus 79 ~Eknmi~v~APi-TVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHE 157 (517)
T KOG0375|consen 79 QEKNMIEVEAPI-TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHE 157 (517)
T ss_pred cCCceEeccCCe-eEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHHHHhcCCCCeEEEecCCcc
Confidence 367899999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhh
Q 024423 84 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 163 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW 163 (268)
.+-+...+.|..||..+|+.++|++..+.|+.||+||+.+..++|||||++|.+.++++|+.++|..+.|..+.+||+||
T Consensus 158 CrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLW 237 (517)
T KOG0375|consen 158 CRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLW 237 (517)
T ss_pred hhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHhhhhccCCCccCcchhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC------CCcccc-CCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCce------EEEEecCCCCC
Q 024423 164 SDPGRDV------KGWGMN-DRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQ------LVTIFSAPNYC 230 (268)
Q Consensus 164 sdp~~~~------~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~------~itifSa~~y~ 230 (268)
+||.... ..|..| .||++|.|.-.|.++||+.||+--|||+||.++.||+.+.+.| +|||||||||.
T Consensus 238 sDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrksqttGFPSLiTiFSAPNYL 317 (517)
T KOG0375|consen 238 SDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYL 317 (517)
T ss_pred cChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcccccCCchheeeecCCchh
Confidence 9997531 234444 7999999999999999999999999999999999999876654 89999999999
Q ss_pred CCCCCcEEEEEEcCCceEEEEE--EccCccccc
Q 024423 231 GEFDNAGAMMSIDEELVCSFQI--LKPAEKKVK 261 (268)
Q Consensus 231 ~~~~n~ga~l~i~~~~~~~~~~--~~~~~~~~~ 261 (268)
+.++|+||||..+++.+ ..++ ..|-|.+-+
T Consensus 318 DvYnNKAAvLKYEnNVM-NIRQFncSPHPYWLP 349 (517)
T KOG0375|consen 318 DVYNNKAAVLKYENNVM-NIRQFNCSPHPYWLP 349 (517)
T ss_pred hhhccHHHHhhhhcccc-eeeccCCCCCCcccc
Confidence 99999999999988764 3444 355555544
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-60 Score=400.18 Aligned_cols=260 Identities=48% Similarity=0.925 Sum_probs=247.6
Q ss_pred CcceeecCCCeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccc
Q 024423 5 KFLLFNFTKPLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 84 (268)
Q Consensus 5 ~~~~l~~~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 84 (268)
..++.+++.|+ +|+||+|||+++|.++++..|..++..++|+|||||||++|.|++.++.++|++||++|.+||||||.
T Consensus 52 e~nV~~v~~pv-tvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEs 130 (319)
T KOG0371|consen 52 EENVQPVNCPV-TVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHES 130 (319)
T ss_pred cccccccccce-EEecCcchhHHHHHHHHHccCCCCCcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHH
Confidence 45678889998 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhccchhHHHHHh-hHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhh
Q 024423 85 ASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 163 (268)
Q Consensus 85 ~~~~~~~~f~~e~~~~~-~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW 163 (268)
+.+...|||++||.++| ...+|..+.+.|+.+|+++.++++++|.|||++|++.+++.++.+.|..++|..+.++|+||
T Consensus 131 rqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLw 210 (319)
T KOG0371|consen 131 RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLW 210 (319)
T ss_pred HHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheec
Confidence 99999999999999999 56899999999999999999999999999999999999999999999889999999999999
Q ss_pred cCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEEc
Q 024423 164 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSID 243 (268)
Q Consensus 164 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~ 243 (268)
|||.. .-+|..++||.++.||.+..++|-.+||++++-|+||.+.+||.+.....++|||||||||+...|.+|++.++
T Consensus 211 sdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d 289 (319)
T KOG0371|consen 211 SDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERD 289 (319)
T ss_pred cCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhh
Confidence 99985 47899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEccCcccccccccc
Q 024423 244 EELVCSFQILKPAEKKVKFMVST 266 (268)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~ 266 (268)
+.....|.+++|++.+.+-...|
T Consensus 290 ~~~~~~f~q~~psp~k~e~~vtr 312 (319)
T KOG0371|consen 290 DTKNYDFLQFDPSPRKVEPDVTR 312 (319)
T ss_pred hccCcceEEecCCcccccccccc
Confidence 99999999999998887665544
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-54 Score=388.37 Aligned_cols=250 Identities=34% Similarity=0.664 Sum_probs=221.1
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHhcCCCCCc-eEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhh
Q 024423 12 TKPLFVFAGDVHGQYSDLLRLFEYGGYPPKA-NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 90 (268)
Q Consensus 12 ~~p~i~viGDiHG~~~~l~~~l~~~~~~~~~-~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~ 90 (268)
+..+ .|+||+||.+++|.-+|-+.|+|+.+ .|||.||+||||.+|+|+|..|+++-+.+|..+++-|||||+.++|..
T Consensus 164 S~qV-TiCGDLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlR 242 (631)
T KOG0377|consen 164 SQQV-TICGDLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLR 242 (631)
T ss_pred ccce-EEeccccccccceEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHH
Confidence 3445 99999999999999999999999865 499999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHh---hHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCC--------CCC--------
Q 024423 91 YGFYDECKRRF---NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPR--------PTA-------- 151 (268)
Q Consensus 91 ~~f~~e~~~~~---~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r--------~~~-------- 151 (268)
|||..|...+| +.++.+.+.++|+.||++.+++++++++|||++. .+.++-+.+|.| |..
T Consensus 243 YGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~ 321 (631)
T KOG0377|consen 243 YGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEK 321 (631)
T ss_pred HhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCc
Confidence 99999999999 5689999999999999999999999999999985 455665555443 211
Q ss_pred ------CCCchhHhHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEec
Q 024423 152 ------VPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFS 225 (268)
Q Consensus 152 ------~~~~~~~~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifS 225 (268)
..++..+.|+|||||......|.+.-||.|++||++.+.+||++++++++||+|||.++||++.+++||+||||
T Consensus 322 ~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFS 401 (631)
T KOG0377|consen 322 LSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFS 401 (631)
T ss_pred hhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEe
Confidence 11356788999999998877888889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcEEEEEEcCCceEEEEEEccCccccccc
Q 024423 226 APNYCGEFDNAGAMMSIDEELVCSFQILKPAEKKVKFM 263 (268)
Q Consensus 226 a~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~~ 263 (268)
|+||....+|+||++.+.+.....|.+...+..+.+.+
T Consensus 402 ASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k~t~~~t 439 (631)
T KOG0377|consen 402 ASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAKQTKRLT 439 (631)
T ss_pred ccchheecCCCceEEEeCCCCCchHHHHHhhhhhhhhh
Confidence 99999989999999999999888876655554444443
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=3.7e-46 Score=341.78 Aligned_cols=242 Identities=45% Similarity=0.878 Sum_probs=227.4
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCC-ceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccch
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 94 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 94 (268)
+.|+||+||++.++.++++..|.++. ..++|.||++|||..|.|+...+...|+.+|+++|++|||||...++..|||.
T Consensus 216 ~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~ 295 (476)
T KOG0376|consen 216 ISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFE 295 (476)
T ss_pred EEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCC
Confidence 38999999999999999999998875 56999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCC-CCCCcHHhhhcCCCCCCCCCchhHhHhhhcCCCCCCCCc
Q 024423 95 DECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLS-PDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGW 173 (268)
Q Consensus 95 ~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~-p~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~ 173 (268)
+++..+|..+.+..+.+.|..||++..++++++.+|||+. |.-.+++++++|.|+...++.+..++++||||... .+.
T Consensus 296 ~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~ 374 (476)
T KOG0376|consen 296 GEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGR 374 (476)
T ss_pred cchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccc-cCC
Confidence 9999999999999999999999999999999999999985 44568999999999988888999999999999854 788
Q ss_pred cccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEEc-CCceEEEEE
Q 024423 174 GMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSID-EELVCSFQI 252 (268)
Q Consensus 174 ~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~-~~~~~~~~~ 252 (268)
.++.||.|..||++++.+||+.++++.|||||+..+.||++.++|+|+|||||||||...+|.||++.++ +++...+..
T Consensus 375 s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~ 454 (476)
T KOG0376|consen 375 SPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYT 454 (476)
T ss_pred CccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceee
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 678888888
Q ss_pred EccCcc
Q 024423 253 LKPAEK 258 (268)
Q Consensus 253 ~~~~~~ 258 (268)
+++.|.
T Consensus 455 ~e~vp~ 460 (476)
T KOG0376|consen 455 FEAVPH 460 (476)
T ss_pred cccCCC
Confidence 877664
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=6.3e-38 Score=270.37 Aligned_cols=214 Identities=52% Similarity=0.866 Sum_probs=175.7
Q ss_pred EEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchhH
Q 024423 17 VFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 96 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e 96 (268)
+|||||||++++|.++|+..+..+.+.+||+||+||||+++.+++.+++.++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 489999999999999999999988999999999999999999999999998876 8899999999999988766655433
Q ss_pred H---------HHHhhHHHHHHhchhhhcCCeEEEEcC-eEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhhcCC
Q 024423 97 C---------KRRFNVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDP 166 (268)
Q Consensus 97 ~---------~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp 166 (268)
. .......+++.+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 223345677888899999999998887 99999999999876554443 1223345689999999
Q ss_pred CCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEE
Q 024423 167 GRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMS 241 (268)
Q Consensus 167 ~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~ 241 (268)
.........+.++. |+++++.|++.++.+.|||||+++..|+.....++++||+|++.|++..+|..+.+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 75433333334443 999999999999999999999999999876678899999999999876677776654
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.96 E-value=2e-28 Score=209.52 Aligned_cols=176 Identities=22% Similarity=0.372 Sum_probs=129.9
Q ss_pred EEEecCCCCHHHHHHHHHhcCC--------CCCceEEEeCCccCCCCCcHHHHHHHHHhhhh---CCCeEEEecCCcccc
Q 024423 17 VFAGDVHGQYSDLLRLFEYGGY--------PPKANYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNHECA 85 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~~--------~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~---~p~~v~~lrGNHE~~ 85 (268)
+||||||||+++|.++|+.+++ .+.+.+||+||+|||||++.+++.++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 4899999999999999998875 35678999999999999999999999998753 467899999999999
Q ss_pred chhhhccchhHHH-HHh------hHHHH---HHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCc
Q 024423 86 SINRIYGFYDECK-RRF------NVRLW---KAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDT 155 (268)
Q Consensus 86 ~~~~~~~f~~e~~-~~~------~~~~~---~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~ 155 (268)
.++..+.+..... ... ...++ ..+.+|++.+|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 9875443321111 000 11122 23478999999998766 78899999844
Q ss_pred hhHhHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCC
Q 024423 156 GLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAP 227 (268)
Q Consensus 156 ~~~~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~ 227 (268)
+|++.-.... ... .-+...+.++++.++.+++|+|||+++.|....+++|+++|.++.
T Consensus 140 ------~w~r~y~~~~---~~~-----~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSKET---SDK-----ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhhhh---hhc-----cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 2322110000 000 011246888999999999999999999887668999999998854
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=1.2e-27 Score=209.78 Aligned_cols=118 Identities=24% Similarity=0.436 Sum_probs=94.7
Q ss_pred EEEecCCCCHHHHHHHHHhcCCC---------CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccch
Q 024423 17 VFAGDVHGQYSDLLRLFEYGGYP---------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 87 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~~~---------~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 87 (268)
+||||||||++.|.++|+++++. ..+++|||||||||||+|.+||.+++++. .+.++++||||||.+++
T Consensus 4 ~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~~l 81 (245)
T PRK13625 4 DIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNKLY 81 (245)
T ss_pred EEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHHHH
Confidence 89999999999999999998874 46789999999999999999999998874 45689999999999887
Q ss_pred hhhccc-------hhHHHHHh-------hHHHHHHhchhhhcCCeEEEEc-CeEEEecCCCCCC
Q 024423 88 NRIYGF-------YDECKRRF-------NVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPD 136 (268)
Q Consensus 88 ~~~~~f-------~~e~~~~~-------~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~p~ 136 (268)
+...+- ..+....+ ..++.+.+.+|++++|++..++ ++++|||||+.|.
T Consensus 82 ~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 82 RFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 643210 11111122 2346778899999999997764 5799999999885
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.94 E-value=3.2e-26 Score=197.83 Aligned_cols=115 Identities=25% Similarity=0.432 Sum_probs=90.7
Q ss_pred EEEecCCCCHHHHHHHHHhcCCC--------CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchh
Q 024423 17 VFAGDVHGQYSDLLRLFEYGGYP--------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 88 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~~~--------~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 88 (268)
+||||||||++.|.++|+++++. +.+.+|||||||||||+|.+|++++++++ .+.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 79999999999999999998875 56789999999999999999999999885 345799999999998875
Q ss_pred hhcc------ch-----------hHHHHHh--hHHHHHHhchhhhcCCeEEEEcCeEEEecCCCC
Q 024423 89 RIYG------FY-----------DECKRRF--NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLS 134 (268)
Q Consensus 89 ~~~~------f~-----------~e~~~~~--~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~ 134 (268)
...+ +. .+..+.+ ..+..+...+||+.||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 3211 00 0111111 124557788999999999765 58999999975
No 23
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.94 E-value=1.4e-26 Score=203.45 Aligned_cols=118 Identities=28% Similarity=0.413 Sum_probs=97.6
Q ss_pred EEEecCCCCHHHHHHHHHhcCCC-CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchh
Q 024423 17 VFAGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD 95 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~ 95 (268)
+||||||||+++|+++|+++++. +.+.++|+||||||||+|.||+.++.+++ .++++|+||||.++++..++...
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~~ 77 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIKK 77 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCccc
Confidence 89999999999999999999986 57889999999999999999999999875 57999999999998876665432
Q ss_pred HHHHHh-----hHHHHHHhchhhhcCCeEEEEcC-eEEEecCCCCCCCC
Q 024423 96 ECKRRF-----NVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLS 138 (268)
Q Consensus 96 e~~~~~-----~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~~ 138 (268)
...... .....+.+.+|++++|+...+++ ++++||||++|.+.
T Consensus 78 ~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 78 PKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred cccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 211111 12233568899999999988765 89999999999875
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.94 E-value=1.5e-25 Score=198.79 Aligned_cols=216 Identities=17% Similarity=0.303 Sum_probs=140.2
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCC-CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccch
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 94 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 94 (268)
++||||||||++.|.++|+++++. ..+.++|+||+|||||+|.+++.++.++ +.++++|+||||.+++...++..
T Consensus 3 ~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g~~ 78 (275)
T PRK00166 3 TYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAGIK 78 (275)
T ss_pred EEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcCCc
Confidence 389999999999999999999874 5688999999999999999999999876 35799999999999887666543
Q ss_pred hHHHHHh-----hHHHHHHhchhhhcCCeEEEE-cCeEEEecCCCCCCCCcHHhh---hcCCCCCCCCCc-hhHhHhhhc
Q 024423 95 DECKRRF-----NVRLWKAFTDCFNCLPVAALI-DEKILCMHGGLSPDLSHLDQI---RNLPRPTAVPDT-GLLCDLLWS 164 (268)
Q Consensus 95 ~e~~~~~-----~~~~~~~~~~~~~~lP~~~~i-~~~~l~vHgGi~p~~~~~~~i---~~i~r~~~~~~~-~~~~~llWs 164 (268)
....... .....+.+.+|++.+|+...+ +.++++||||++|.+...+.+ ++++..+..++. .....+.|+
T Consensus 79 ~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my~~ 158 (275)
T PRK00166 79 RNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMYGN 158 (275)
T ss_pred cccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhcCC
Confidence 2111111 123345578999999998765 568999999999987532211 122222222222 345555665
Q ss_pred CCCCCCCCccccCCCce-eeeChhhHH--HHHHh-----------------------------CCCceEEeeeeeeccCe
Q 024423 165 DPGRDVKGWGMNDRGVS-YTFGPDKVS--EFLKR-----------------------------HDLDLVCRAHQVVEDGY 212 (268)
Q Consensus 165 dp~~~~~~~~~~~rg~~-~~fg~~~~~--~fl~~-----------------------------~~~~~iIrgH~~~~~G~ 212 (268)
.|. .|.++..|.. ..|.-.++. +||.. ..-..||-||.+...|.
T Consensus 159 ~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G~ 234 (275)
T PRK00166 159 EPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEGL 234 (275)
T ss_pred CcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCCc
Confidence 563 2433322210 111111110 01111 12347999999987787
Q ss_pred EEecCceEEEEecCCCCCCCCCCcEEEEEEcCC
Q 024423 213 EFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEE 245 (268)
Q Consensus 213 ~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~ 245 (268)
.. ...++.+-|.--+ +++=+.+.++..
T Consensus 235 ~~--~~~~~~LDtGcvw----gg~Lta~~l~~~ 261 (275)
T PRK00166 235 TT--PPNIIALDTGCVW----GGKLTALRLEDK 261 (275)
T ss_pred cC--CCCeEEeeccccc----CCeEEEEEeCCC
Confidence 65 4557777766544 344556777643
No 25
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.93 E-value=6.3e-26 Score=195.54 Aligned_cols=189 Identities=20% Similarity=0.268 Sum_probs=121.6
Q ss_pred CCCCCcceeecCC----CeEEEEecCCCCHHHHHHHHHhcCCC-CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeE
Q 024423 1 MNYPKFLLFNFTK----PLFVFAGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENF 75 (268)
Q Consensus 1 m~~~~~~~l~~~~----p~i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v 75 (268)
|..|++....++. ++ +||||||||+++|.++|+.+++. ..++++||||+|||||+|.+|++++.+ .++
T Consensus 1 ~~~~~~~~~~~~~~~~~ri-~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~ 73 (218)
T PRK11439 1 MKQPAPVYQRIAGHQWRHI-WLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWV 73 (218)
T ss_pred CCCcchheecccCCCCCeE-EEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCc
Confidence 4556544434443 77 99999999999999999999886 578899999999999999999999865 257
Q ss_pred EEecCCccccchhhhccchhH--------HHHHh---hHHHHHHhchhhhcCCeEEEE---cCeEEEecCCCCCCCCcHH
Q 024423 76 FLLRGNHECASINRIYGFYDE--------CKRRF---NVRLWKAFTDCFNCLPVAALI---DEKILCMHGGLSPDLSHLD 141 (268)
Q Consensus 76 ~~lrGNHE~~~~~~~~~f~~e--------~~~~~---~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHgGi~p~~~~~~ 141 (268)
++|+||||.++++...+-... ..... ..+.++.+.+|++.||+...+ ++++++||||++... .+
T Consensus 74 ~~v~GNHE~~~l~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~--~~ 151 (218)
T PRK11439 74 RAVRGNHEQMALDALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV--YE 151 (218)
T ss_pred eEeeCchHHHHHHHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc--hh
Confidence 899999999988643211000 00011 123445667899999998655 347999999974321 11
Q ss_pred hhhcCCCCCCCCCchhHhHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEE
Q 024423 142 QIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLV 221 (268)
Q Consensus 142 ~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~i 221 (268)
... +. ...+++|+++..... + . +. ...+.+.+|.||++.+.-.. . +..+
T Consensus 152 ~~~----~~------~~~~~~w~r~~~~~~-~---~-~~-------------~~~~~~~vv~GHT~~~~~~~--~-~~~i 200 (218)
T PRK11439 152 WQK----DV------DLHQVLWSRSRLGER-Q---K-GQ-------------GITGADHFWFGHTPLRHRVD--I-GNLH 200 (218)
T ss_pred hhc----cC------CccceEEcChhhhhc-c---c-cc-------------cccCCCEEEECCccCCCccc--c-CCEE
Confidence 111 10 114568876531100 0 0 00 11245679999999865332 2 3356
Q ss_pred EEecCCCC
Q 024423 222 TIFSAPNY 229 (268)
Q Consensus 222 tifSa~~y 229 (268)
-|-+.+-|
T Consensus 201 ~IDtGav~ 208 (218)
T PRK11439 201 YIDTGAVF 208 (218)
T ss_pred EEECCCCC
Confidence 66665544
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.93 E-value=5.3e-26 Score=200.39 Aligned_cols=118 Identities=23% Similarity=0.385 Sum_probs=97.9
Q ss_pred EEEecCCCCHHHHHHHHHhcCCC-CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccch-
Q 024423 17 VFAGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY- 94 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~- 94 (268)
+||||||||+++|.++|+++++. ..+.++|+||+|||||+|+||+.++.++. .++++|+||||.+++...+|+.
T Consensus 4 YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g~~~ 79 (279)
T TIGR00668 4 YLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAGISR 79 (279)
T ss_pred EEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcCCCc
Confidence 99999999999999999999976 46889999999999999999999998864 4688999999999988776652
Q ss_pred ----hHHHHHhhHHHHHHhchhhhcCCeEEEEc-CeEEEecCCCCCCCC
Q 024423 95 ----DECKRRFNVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPDLS 138 (268)
Q Consensus 95 ----~e~~~~~~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~p~~~ 138 (268)
+.....+..+..+.+.+|++.+|+..... .++++||||++|.++
T Consensus 80 ~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 80 NKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred cCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 22222233455677899999999986554 369999999999885
No 27
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.93 E-value=4e-25 Score=192.48 Aligned_cols=119 Identities=28% Similarity=0.514 Sum_probs=95.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHhcCCCC----------CceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 14 PLFVFAGDVHGQYSDLLRLFEYGGYPP----------KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 14 p~i~viGDiHG~~~~l~~~l~~~~~~~----------~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
|+ .||||||||+.+|+++|+++++.+ .+++|||||||||||+|.||+.++.+++. +.++++|+||||
T Consensus 2 ~i-~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 2 PF-DIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred Ce-EEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 55 999999999999999999998753 46899999999999999999999998863 347999999999
Q ss_pred ccchhhhcc--------chhHHHHHh---hHHHHHHhchhhhcCCeEEEEc-CeEEEecCCCCCC
Q 024423 84 CASINRIYG--------FYDECKRRF---NVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPD 136 (268)
Q Consensus 84 ~~~~~~~~~--------f~~e~~~~~---~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~p~ 136 (268)
.++++...+ +. +....+ ..++.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 988764322 21 111222 2456678889999999997765 4799999998764
No 28
>PHA02239 putative protein phosphatase
Probab=99.92 E-value=1.5e-24 Score=188.60 Aligned_cols=169 Identities=21% Similarity=0.303 Sum_probs=116.4
Q ss_pred EEEecCCCCHHHHHHHHHhcCCC--CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhcc--
Q 024423 17 VFAGDVHGQYSDLLRLFEYGGYP--PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG-- 92 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~-- 92 (268)
++|||||||+..|.++++.+... +.+.+||+|||||||++|.+++..++.+. ..+.++++|+||||.+++....+
T Consensus 4 ~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~~~~ 82 (235)
T PHA02239 4 YVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIMENVD 82 (235)
T ss_pred EEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHhCch
Confidence 89999999999999999987543 46889999999999999999999998875 34568999999999987653210
Q ss_pred --------ch----hHHHHHhh-------------------------------HHHHHHhchhhhcCCeEEEEcCeEEEe
Q 024423 93 --------FY----DECKRRFN-------------------------------VRLWKAFTDCFNCLPVAALIDEKILCM 129 (268)
Q Consensus 93 --------f~----~e~~~~~~-------------------------------~~~~~~~~~~~~~lP~~~~i~~~~l~v 129 (268)
+. .+....|+ .+.++.+.+|++.||+... .++++||
T Consensus 83 ~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~-~~~~ifV 161 (235)
T PHA02239 83 RLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK-EDKYIFS 161 (235)
T ss_pred hcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE-ECCEEEE
Confidence 00 01111221 0123445669999999966 4589999
Q ss_pred cCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeec
Q 024423 130 HGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVE 209 (268)
Q Consensus 130 HgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~ 209 (268)
|||+.|... +++ +...+++|.+. . .+ ...-+.||.||+|+.
T Consensus 162 HAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~-------------------~~~g~~vV~GHTp~~ 202 (235)
T PHA02239 162 HSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QP-------------------RKDGFTYVCGHTPTD 202 (235)
T ss_pred eCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CC-------------------CCCCcEEEECCCCCC
Confidence 999988643 221 12378999986 2 11 112346899999987
Q ss_pred cCeEEecCceEEEEecCC
Q 024423 210 DGYEFFADRQLVTIFSAP 227 (268)
Q Consensus 210 ~G~~~~~~~~~itifSa~ 227 (268)
++..... ++.|.|-+..
T Consensus 203 ~~~~~~~-~~~I~IDtGa 219 (235)
T PHA02239 203 SGEVEIN-GDMLMCDVGA 219 (235)
T ss_pred CCccccc-CCEEEeecCc
Confidence 6543322 3346665544
No 29
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.91 E-value=1.2e-23 Score=185.92 Aligned_cols=187 Identities=22% Similarity=0.307 Sum_probs=123.8
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCC------CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCC-eEEEecCCccccchh
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYP------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECASIN 88 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~------~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~-~v~~lrGNHE~~~~~ 88 (268)
+++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|++++++++..+|. ++++|+||||.+++.
T Consensus 4 iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l~ 83 (304)
T cd07421 4 VICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFAA 83 (304)
T ss_pred EEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHHh
Confidence 499999999999999999865421 2457999999999999999999999999888875 689999999988764
Q ss_pred hhcc---------ch------------------------------------------------------hHHHHHhh---
Q 024423 89 RIYG---------FY------------------------------------------------------DECKRRFN--- 102 (268)
Q Consensus 89 ~~~~---------f~------------------------------------------------------~e~~~~~~--- 102 (268)
-... |. .+....|+
T Consensus 84 fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~~ 163 (304)
T cd07421 84 FLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVPH 163 (304)
T ss_pred HhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCCc
Confidence 2111 00 01112221
Q ss_pred ------HHHHHHhchhhhcCCeEEEEcCeE-------------EEecCCCCCCCCcHHhhhcCC-CCCCCCCchhHhHhh
Q 024423 103 ------VRLWKAFTDCFNCLPVAALIDEKI-------------LCMHGGLSPDLSHLDQIRNLP-RPTAVPDTGLLCDLL 162 (268)
Q Consensus 103 ------~~~~~~~~~~~~~lP~~~~i~~~~-------------l~vHgGi~p~~~~~~~i~~i~-r~~~~~~~~~~~~ll 162 (268)
..+-+...+|++.||.....+ ++ +|||||+.|...--+|.+.+. +....+. .+++
T Consensus 164 ~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~l 238 (304)
T cd07421 164 GSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAPL 238 (304)
T ss_pred chHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----cccc
Confidence 123344778999999986543 55 999999999988667766532 2222221 3788
Q ss_pred hcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCC
Q 024423 163 WSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCG 231 (268)
Q Consensus 163 Wsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~ 231 (268)
|.+... | ..++. + ...-.+||-||+.. ....+.-|.|-+...|.+
T Consensus 239 ~~R~~f----~-~~~~~----~----------~~~~~~VVhGHt~~-----~~~~~~Ri~iDtGa~~~~ 283 (304)
T cd07421 239 SGRKNV----W-NIPQE----L----------ADKKTIVVSGHHGK-----LHIDGLRLIIDEGGGFDD 283 (304)
T ss_pred ccchhh----h-cCccc----c----------cCCCeEEEECCCCC-----ceecCCEEEEECCCCcCC
Confidence 888742 1 11111 0 00125688999932 223334456667666654
No 30
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.90 E-value=3.4e-23 Score=178.48 Aligned_cols=115 Identities=23% Similarity=0.303 Sum_probs=85.3
Q ss_pred CCeEEEEecCCCCHHHHHHHHHhcCCC-CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhc
Q 024423 13 KPLFVFAGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIY 91 (268)
Q Consensus 13 ~p~i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 91 (268)
+++ +||||||||+++|+++|+.+.+. ..+.++|+||+|||||+|.+++.++.+ .++++||||||.+++....
T Consensus 15 ~ri-~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~ 87 (218)
T PRK09968 15 RHI-WVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFE 87 (218)
T ss_pred CeE-EEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHh
Confidence 377 99999999999999999998764 467899999999999999999998854 3689999999998876431
Q ss_pred cchhH--------HHHHhh---HHHHHHhchhhhcCCeEEEEc---CeEEEecCCCC
Q 024423 92 GFYDE--------CKRRFN---VRLWKAFTDCFNCLPVAALID---EKILCMHGGLS 134 (268)
Q Consensus 92 ~f~~e--------~~~~~~---~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~ 134 (268)
.-... ...... ........+|++.||+...+. .++++||||++
T Consensus 88 ~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 88 TGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred cCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 10000 000111 122333456899999997653 46899999983
No 31
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.89 E-value=3.7e-23 Score=176.86 Aligned_cols=167 Identities=25% Similarity=0.323 Sum_probs=112.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHhcCCC-CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhcc
Q 024423 14 PLFVFAGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 92 (268)
Q Consensus 14 p~i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 92 (268)
++ +|||||||++.+|.++++.+++. ..+.++|+||+|||||++.+++.++.. .++++|+||||.+.+....+
T Consensus 2 ri-~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 2 RD-FVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CE-EEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 45 89999999999999999998875 468899999999999999999998864 36899999999998875433
Q ss_pred c--hhHHHHHh---------hHHHHHHhchhhhcCCeEEEEc---CeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhH
Q 024423 93 F--YDECKRRF---------NVRLWKAFTDCFNCLPVAALID---EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLL 158 (268)
Q Consensus 93 f--~~e~~~~~---------~~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 158 (268)
- ..+..... ..++++.+.+|++.||+...++ .++++||||+++... .+.... +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc-----cccCcccc
Confidence 1 11111111 1235666888999999998764 379999999865431 111000 01111233
Q ss_pred hHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCe
Q 024423 159 CDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGY 212 (268)
Q Consensus 159 ~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~ 212 (268)
.+++|+++...... +....+.+.||.||++.+.-+
T Consensus 149 ~~~~w~~~~~~~~~-------------------~~~~~~~~~iV~GHTh~~~~~ 183 (207)
T cd07424 149 EELLWSRTRIQKAQ-------------------TQPIKGVDAVVHGHTPVKRPL 183 (207)
T ss_pred eeeeeccchhhhcC-------------------ccccCCCCEEEECCCCCCcce
Confidence 56788876421000 001114577999999987543
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.49 E-value=4.9e-13 Score=106.80 Aligned_cols=157 Identities=25% Similarity=0.293 Sum_probs=99.1
Q ss_pred EEEEecCCCCHHHH----HHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHH--HHhhhhCCCeEEEecCCccccchhh
Q 024423 16 FVFAGDVHGQYSDL----LRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLL--LAYKIKYPENFFLLRGNHECASINR 89 (268)
Q Consensus 16 i~viGDiHG~~~~l----~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l--~~lk~~~p~~v~~lrGNHE~~~~~~ 89 (268)
|+++||+|+..... ..+.+.....+.+.+|++||++|++..+.+..... .......+..+++++||||......
T Consensus 3 i~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~~ 82 (200)
T PF00149_consen 3 ILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGNS 82 (200)
T ss_dssp EEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHHH
T ss_pred EEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceecc
Confidence 38999999999987 44444444566788999999999999887766554 4445567788999999999987653
Q ss_pred hccchhHHH----------------------------------HHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCC
Q 024423 90 IYGFYDECK----------------------------------RRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSP 135 (268)
Q Consensus 90 ~~~f~~e~~----------------------------------~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p 135 (268)
.+....... ........+....+.............++++|.++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~ 162 (200)
T PF00149_consen 83 FYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYS 162 (200)
T ss_dssp HHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSST
T ss_pred ccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCCC
Confidence 222111111 0001111111222222223333445689999998776
Q ss_pred CCCcHHhhhcCCCCCCCCCchhHhHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeee
Q 024423 136 DLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 208 (268)
Q Consensus 136 ~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~ 208 (268)
........ .....+.+.+..++++.++++++.||+..
T Consensus 163 ~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 163 SSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp TSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred cccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 43211110 11245677899999999999999999864
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.38 E-value=2.9e-11 Score=98.25 Aligned_cols=82 Identities=24% Similarity=0.321 Sum_probs=61.4
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchh
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD 95 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~ 95 (268)
+.++||+||+...+.++++.... .+.++++||++++++.+. + .....+++++||||....
T Consensus 2 i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~-------- 61 (155)
T cd00841 2 IGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD-------- 61 (155)
T ss_pred EEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC--------
Confidence 38999999999999999997654 688999999999998654 1 123469999999997642
Q ss_pred HHHHHhhHHHHHHhchhhhcCCeEEEE--c-CeEEEecCCCC
Q 024423 96 ECKRRFNVRLWKAFTDCFNCLPVAALI--D-EKILCMHGGLS 134 (268)
Q Consensus 96 e~~~~~~~~~~~~~~~~~~~lP~~~~i--~-~~~l~vHgGi~ 134 (268)
++.+|....+ + .+++++||...
T Consensus 62 -----------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 -----------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred -----------------cccCCceEEEEECCEEEEEECCccc
Confidence 2445544333 2 37999999643
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.32 E-value=9.3e-11 Score=98.15 Aligned_cols=67 Identities=25% Similarity=0.389 Sum_probs=53.4
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCC--------cHHHHHHHHHhhhhCCCeEEEecCCccccc
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQ--------SLETICLLLAYKIKYPENFFLLRGNHECAS 86 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~--------s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 86 (268)
+.++||+||++.++.++++.+...+.+.++++||++|+|+. +.+++..+..+ +..+++++||||...
T Consensus 3 i~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~~ 77 (182)
T PRK09453 3 LMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSEV 77 (182)
T ss_pred EEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcchh
Confidence 38999999999999999988755667889999999999873 45566555432 346999999999753
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.29 E-value=9.8e-11 Score=94.50 Aligned_cols=151 Identities=22% Similarity=0.285 Sum_probs=90.1
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchh
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD 95 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~ 95 (268)
|+++||+|++...+.++++.+ ...+.++++||++|+ .+++..+... .+++++||||............
T Consensus 3 i~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~~~ 70 (156)
T PF12850_consen 3 IAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDEEY 70 (156)
T ss_dssp EEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECTCS
T ss_pred EEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhccc
Confidence 389999999999999999988 346778899999993 6666666443 6999999999655332111000
Q ss_pred HHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhhcCCCCCCCCccc
Q 024423 96 ECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGM 175 (268)
Q Consensus 96 e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~ 175 (268)
+....... ....+++++||.....
T Consensus 71 ----------------~~~~~~~~-~~~~~i~~~H~~~~~~--------------------------------------- 94 (156)
T PF12850_consen 71 ----------------LLDALRLT-IDGFKILLSHGHPYDV--------------------------------------- 94 (156)
T ss_dssp ----------------SHSEEEEE-ETTEEEEEESSTSSSS---------------------------------------
T ss_pred ----------------cccceeee-ecCCeEEEECCCCccc---------------------------------------
Confidence 12222221 2245899999964330
Q ss_pred cCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEEcC
Q 024423 176 NDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDE 244 (268)
Q Consensus 176 ~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~ 244 (268)
..+.+.+.+.+...+.++++.||...+.-.+ ..+..+++.-|...... +...+++.++-
T Consensus 95 -------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~~--~~~~~~~i~~~ 153 (156)
T PF12850_consen 95 -------QWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPRH--GDQSGYAILDI 153 (156)
T ss_dssp -------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-SS--SSSEEEEEEEE
T ss_pred -------ccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCCC--CCCCEEEEEEE
Confidence 0233446667778899999999998754333 33444555544333221 22566665543
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.28 E-value=1.3e-10 Score=95.02 Aligned_cols=61 Identities=16% Similarity=0.144 Sum_probs=47.1
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCC-CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcccc
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 85 (268)
+.++||+||+..++..+++..... ..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 3 i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 3 ILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred EEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 389999999998877777665554 678899999998 456766665432 3599999999973
No 37
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.24 E-value=4.8e-10 Score=96.90 Aligned_cols=69 Identities=10% Similarity=0.196 Sum_probs=55.4
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcccc
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 85 (268)
|.++||+||++..+.++++.......+.+|++||++++|+..-++..++..+. ..+..+++++||||..
T Consensus 7 Il~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 7 VLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred EEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 48999999999999999987654567889999999999976666666665553 2345689999999975
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.21 E-value=1.3e-10 Score=92.56 Aligned_cols=117 Identities=24% Similarity=0.256 Sum_probs=78.5
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcH--HHHHHHHHhhhhCCCeEEEecCCccccchhhhccc
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 93 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~--evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f 93 (268)
++++||+||++. .....+.+.++++||+++++..+- +.+.++..++ . ..+++++||||....
T Consensus 2 i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~------ 65 (135)
T cd07379 2 FVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD------ 65 (135)
T ss_pred EEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC------
Confidence 389999999987 123355678999999999886432 2344443332 2 236789999996421
Q ss_pred hhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhhcCCCCCCCCc
Q 024423 94 YDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGW 173 (268)
Q Consensus 94 ~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~ 173 (268)
.-+.+++++||.+.+.. +..+.
T Consensus 66 ---------------------------~~~~~ilv~H~~p~~~~----------------------~~~~~--------- 87 (135)
T cd07379 66 ---------------------------PEDTDILVTHGPPYGHL----------------------DLVSS--------- 87 (135)
T ss_pred ---------------------------CCCCEEEEECCCCCcCc----------------------ccccc---------
Confidence 12457899999432210 00000
Q ss_pred cccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeE
Q 024423 174 GMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYE 213 (268)
Q Consensus 174 ~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 213 (268)
....|.+.+.+++++.+.++++.||+..+.|++
T Consensus 88 -------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 -------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred -------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 013667888999999999999999999988876
No 39
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.08 E-value=6.9e-09 Score=86.71 Aligned_cols=58 Identities=19% Similarity=0.293 Sum_probs=41.7
Q ss_pred EEEEecCC-CCHH-----HHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcccc
Q 024423 16 FVFAGDVH-GQYS-----DLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 16 i~viGDiH-G~~~-----~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 85 (268)
|.||||.| |... .+.++++. .+.+.++.+||+++ .+++.++..++ .++++++||||..
T Consensus 2 i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 2 VLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred EEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 48999999 5543 35555543 34678999999987 67767665542 2589999999964
No 40
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.05 E-value=2.5e-09 Score=88.89 Aligned_cols=65 Identities=20% Similarity=0.233 Sum_probs=46.7
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCc-HHHHHHHHHhhhhCCCeEEEecCCccccc
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQS-LETICLLLAYKIKYPENFFLLRGNHECAS 86 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s-~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 86 (268)
|+++||+||++..+.. ......+.+.+|++||++++|... .+.+..+. ..+..+++++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 3789999999998876 333334567899999999998753 33333322 23456999999999754
No 41
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.01 E-value=3.1e-09 Score=92.40 Aligned_cols=62 Identities=24% Similarity=0.373 Sum_probs=44.8
Q ss_pred EEEEecCCCCHHHHH-HHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccch
Q 024423 16 FVFAGDVHGQYSDLL-RLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 87 (268)
Q Consensus 16 i~viGDiHG~~~~l~-~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 87 (268)
|+++|||||++.... +.++. ...+.++++||+++ .+.+++..+..+ +..+++++||||.+..
T Consensus 3 Ia~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~ 65 (238)
T cd07397 3 IAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYD 65 (238)
T ss_pred EEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCccccc
Confidence 389999999987642 33433 23578999999986 456766666544 3458999999998653
No 42
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.00 E-value=1.4e-09 Score=89.46 Aligned_cols=66 Identities=24% Similarity=0.254 Sum_probs=47.1
Q ss_pred EEEecCCCCHHHHHHHH-HhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcccc
Q 024423 17 VFAGDVHGQYSDLLRLF-EYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l-~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 85 (268)
.++||+|++.......+ +.......+.++++||+++++....... ++. ....+..+++++||||..
T Consensus 2 ~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 2 QYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred ceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 68999999988776655 3233445677889999999887654443 222 223456799999999986
No 43
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.99 E-value=5.9e-09 Score=80.32 Aligned_cols=116 Identities=27% Similarity=0.382 Sum_probs=82.5
Q ss_pred EEecCCCCHHHHHHHH--HhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchh
Q 024423 18 FAGDVHGQYSDLLRLF--EYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD 95 (268)
Q Consensus 18 viGDiHG~~~~l~~~l--~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~ 95 (268)
++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 2 ~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD------------ 69 (131)
T cd00838 2 VISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD------------ 69 (131)
T ss_pred eeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce------------
Confidence 7899999999888765 33444556789999999999887776554423333356678999999999
Q ss_pred HHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhhcCCCCCCCCccc
Q 024423 96 ECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGM 175 (268)
Q Consensus 96 e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~ 175 (268)
++++|+.+.+...... +..
T Consensus 70 ------------------------------i~~~H~~~~~~~~~~~---------------------~~~---------- 88 (131)
T cd00838 70 ------------------------------ILLTHGPPYDPLDELS---------------------PDE---------- 88 (131)
T ss_pred ------------------------------EEEeccCCCCCchhhc---------------------ccc----------
Confidence 8889997655321000 000
Q ss_pred cCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeE
Q 024423 176 NDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYE 213 (268)
Q Consensus 176 ~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 213 (268)
......+...+...+.+.+|.||+.....+.
T Consensus 89 -------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 -------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred -------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0145667888888999999999999866544
No 44
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.95 E-value=1e-09 Score=86.97 Aligned_cols=143 Identities=41% Similarity=0.663 Sum_probs=112.2
Q ss_pred hhhhccchhHHHHHhhHH-HHHH---hchhhhcCCeEEEEcC-eEEEecCCCCCCC-CcHHhhhcCCCCC--CCCCchhH
Q 024423 87 INRIYGFYDECKRRFNVR-LWKA---FTDCFNCLPVAALIDE-KILCMHGGLSPDL-SHLDQIRNLPRPT--AVPDTGLL 158 (268)
Q Consensus 87 ~~~~~~f~~e~~~~~~~~-~~~~---~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~-~~~~~i~~i~r~~--~~~~~~~~ 158 (268)
+...+++.+++...+... .|.. ..++|+.+|+.++++. .++|.|++++|.. ..+++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 344566666665555543 4555 8899999999998888 8999999999975 5677776666554 45555666
Q ss_pred hHhhhcCCCCC-CCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCC
Q 024423 159 CDLLWSDPGRD-VKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYC 230 (268)
Q Consensus 159 ~~llWsdp~~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~ 230 (268)
.+.+|+++... ...|.++++|....+ ++....|+..+..+.+.++|+....++....++..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 67799988763 578888899988777 778888998888888999999999999887776899999999986
No 45
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.87 E-value=7.3e-08 Score=84.20 Aligned_cols=203 Identities=17% Similarity=0.259 Sum_probs=100.9
Q ss_pred EEEecCCCC------HHHHHHHHHhcCCCCCceEEEeCCccCC--C-----CCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 17 VFAGDVHGQ------YSDLLRLFEYGGYPPKANYLFLGDYVDR--G-----KQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 17 ~viGDiHG~------~~~l~~~l~~~~~~~~~~~vflGD~vDr--G-----~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
+++||+|.. ...+.+.|+.. ....+.++++||++|. | +...+++.++..++ ..+..+++++||||
T Consensus 4 ~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~-~~g~~v~~v~GNHD 81 (241)
T PRK05340 4 LFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALS-DSGVPCYFMHGNRD 81 (241)
T ss_pred EEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHH-HcCCeEEEEeCCCc
Confidence 899999944 23455555432 2346789999999985 2 22456666666664 23357999999999
Q ss_pred ccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEE-cCeEEEecCCCCCCCCc-HHhhhcCCC-CC------CCCC
Q 024423 84 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALI-DEKILCMHGGLSPDLSH-LDQIRNLPR-PT------AVPD 154 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~l~vHgGi~p~~~~-~~~i~~i~r-~~------~~~~ 154 (268)
..... ...+..+. ..+.. |....+ +.+++++||-..+.... -...+++-| |. ..|.
T Consensus 82 ~~~~~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~~p~ 146 (241)
T PRK05340 82 FLLGK-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLALPL 146 (241)
T ss_pred hhhhH-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHhCCH
Confidence 74321 00011110 11111 232233 34799999986543221 111222111 10 0000
Q ss_pred chhHhHhh--hcCCCCCCCCccccCCCce--eeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCC
Q 024423 155 TGLLCDLL--WSDPGRDVKGWGMNDRGVS--YTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYC 230 (268)
Q Consensus 155 ~~~~~~ll--Wsdp~~~~~~~~~~~rg~~--~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~ 230 (268)
.....+. |..-+. ..+..... .-..++++.+.+++.+.+.+|.||+..+.-.....++.-++-.+-++.
T Consensus 147 -~~~~~ia~~~~~~s~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgdw- 219 (241)
T PRK05340 147 -SIRLRIAAKMRAKSK-----AANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGDW- 219 (241)
T ss_pred -HHHHHHHHHHHHHHH-----HhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCCC-
Confidence 0000000 000000 00000111 123456788888999999999999987643333223211122222222
Q ss_pred CCCCCcEEEEEEcCCc
Q 024423 231 GEFDNAGAMMSIDEEL 246 (268)
Q Consensus 231 ~~~~n~ga~l~i~~~~ 246 (268)
...+.++.++++.
T Consensus 220 ---~~~~~~~~~~~~~ 232 (241)
T PRK05340 220 ---HEQGSVLKVDADG 232 (241)
T ss_pred ---CCCCeEEEEECCc
Confidence 1347788888763
No 46
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.79 E-value=8.7e-07 Score=75.61 Aligned_cols=203 Identities=18% Similarity=0.196 Sum_probs=114.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCcc--CCCCCcHHHHH-HHHHhhhhCCCeEEEecCCccccchhhh
Q 024423 14 PLFVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYV--DRGKQSLETIC-LLLAYKIKYPENFFLLRGNHECASINRI 90 (268)
Q Consensus 14 p~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~v--DrG~~s~evl~-~l~~lk~~~p~~v~~lrGNHE~~~~~~~ 90 (268)
.+ ..+.|+||..+.+.++++.+.....+.+++.||+. +.|+.-...-. .+..++ .....++.++||.|...+-..
T Consensus 5 ki-l~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~~ 82 (226)
T COG2129 5 KI-LAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVIDV 82 (226)
T ss_pred eE-EEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHHH
Confidence 44 89999999999999999988777788899999999 88875322221 133333 345689999999988654311
Q ss_pred ccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCC--C----cHHhhhcCCCC-CCCCCchhHhHhhh
Q 024423 91 YGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDL--S----HLDQIRNLPRP-TAVPDTGLLCDLLW 163 (268)
Q Consensus 91 ~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~--~----~~~~i~~i~r~-~~~~~~~~~~~llW 163 (268)
....+..+. +-...+++--++-=||..|.. + +-++|.+.-+. ..... ....=++.
T Consensus 83 -------l~~~~~~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~-~~~~Il~~ 144 (226)
T COG2129 83 -------LKNAGVNVH----------GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD-NPVNILLT 144 (226)
T ss_pred -------HHhcccccc----------cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc-CcceEEEe
Confidence 000000000 011122222333333333211 1 11222111000 00000 00000111
Q ss_pred cCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEEc
Q 024423 164 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSID 243 (268)
Q Consensus 164 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~ 243 (268)
.-|+..... .++.| -.--|.+++++++++.+-.+.|+||-....|+..-.+ ||+.+|.-.+ ..+.|++.++
T Consensus 145 HaPP~gt~~--d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l~ 215 (226)
T COG2129 145 HAPPYGTLL--DTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIELE 215 (226)
T ss_pred cCCCCCccc--cCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEec
Confidence 111111000 01112 1236899999999999999999999998889877555 8888887754 3688899988
Q ss_pred CC
Q 024423 244 EE 245 (268)
Q Consensus 244 ~~ 245 (268)
++
T Consensus 216 ~~ 217 (226)
T COG2129 216 KE 217 (226)
T ss_pred Cc
Confidence 87
No 47
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.78 E-value=8.5e-08 Score=83.29 Aligned_cols=203 Identities=16% Similarity=0.208 Sum_probs=99.2
Q ss_pred EEEecCCCCH------HHHHHHHHhcCCCCCceEEEeCCccCCC-----CC--cHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 17 VFAGDVHGQY------SDLLRLFEYGGYPPKANYLFLGDYVDRG-----KQ--SLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 17 ~viGDiHG~~------~~l~~~l~~~~~~~~~~~vflGD~vDrG-----~~--s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
+++||+|... ..+.+.+.... ...+.++++||++|.. +. ..++...+..|+ ..+..+++++||||
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~-~~~~~v~~v~GNHD 79 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVS-DQGVPCYFMHGNRD 79 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHH-HCCCeEEEEcCCCc
Confidence 6899999542 23445554332 2567899999999952 11 123445555554 23567999999999
Q ss_pred ccchhhhccchhHHHHHhhHHHHHHh-chhhhcCCeEEEE-cCeEEEecCCCCCCCCc-HHhhhcC-CCCC------CCC
Q 024423 84 CASINRIYGFYDECKRRFNVRLWKAF-TDCFNCLPVAALI-DEKILCMHGGLSPDLSH-LDQIRNL-PRPT------AVP 153 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~~~~~~~~-~~~~~~lP~~~~i-~~~~l~vHgGi~p~~~~-~~~i~~i-~r~~------~~~ 153 (268)
...-. . +.+.. ...+.. |....+ +.+++++||-.-..-.. ....+++ ..|. ..+
T Consensus 80 ~~~~~-----------~----~~~~~gi~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 80 FLIGK-----------R----FAREAGMTLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred hhhhH-----------H----HHHHCCCEEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 74211 0 11111 011211 222222 45899999975431111 1111221 1110 000
Q ss_pred -C-chhHhHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCC
Q 024423 154 -D-TGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCG 231 (268)
Q Consensus 154 -~-~~~~~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~ 231 (268)
. ...+...+++..... . ......-....+..+.++++..+.+++|.||+..+.=.....++.-.+-.+-++..
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~- 218 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-K---QMKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY- 218 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-c---CCCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc-
Confidence 0 111222233321100 0 00000112235677888889999999999999876544333232222333333331
Q ss_pred CCCCcEEEEEEcCC
Q 024423 232 EFDNAGAMMSIDEE 245 (268)
Q Consensus 232 ~~~n~ga~l~i~~~ 245 (268)
..+.++.++++
T Consensus 219 ---~~~~~~~~~~~ 229 (231)
T TIGR01854 219 ---RQGSILRVDAD 229 (231)
T ss_pred ---cCCeEEEEcCC
Confidence 23666777664
No 48
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.78 E-value=7.6e-08 Score=76.18 Aligned_cols=106 Identities=19% Similarity=0.186 Sum_probs=73.5
Q ss_pred EEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchhHH
Q 024423 18 FAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDEC 97 (268)
Q Consensus 18 viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~ 97 (268)
|+||.||..+.+.++... ..+.+.++++||+. .+++..+..++ +..++.++||||
T Consensus 2 viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D-------------- 56 (129)
T cd07403 2 VISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD-------------- 56 (129)
T ss_pred eeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc--------------
Confidence 799999998877776664 45678899999974 24455555441 234899999999
Q ss_pred HHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhhcCCCCCCCCccccC
Q 024423 98 KRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMND 177 (268)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~~ 177 (268)
-+++++|+- |.... +.+.
T Consensus 57 --------------------------~~Ilv~H~p--p~~~~-----------------------~~~~----------- 74 (129)
T cd07403 57 --------------------------VDILLTHAP--PAGIG-----------------------DGED----------- 74 (129)
T ss_pred --------------------------cCEEEECCC--CCcCc-----------------------Cccc-----------
Confidence 478999983 31100 0000
Q ss_pred CCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeE
Q 024423 178 RGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYE 213 (268)
Q Consensus 178 rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 213 (268)
...-|.+++.+++++.+.+.++.||...+..+.
T Consensus 75 ---~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ---FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ---ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011355678888889999999999999876655
No 49
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.74 E-value=1.8e-07 Score=74.82 Aligned_cols=117 Identities=22% Similarity=0.233 Sum_probs=73.0
Q ss_pred EEEEecCCCCH------H----HHHHHHHhcCCCCCceEEEeCCccCCCCCc-H-HHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 16 FVFAGDVHGQY------S----DLLRLFEYGGYPPKANYLFLGDYVDRGKQS-L-ETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 16 i~viGDiHG~~------~----~l~~~l~~~~~~~~~~~vflGD~vDrG~~s-~-evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
|+.++|+|=.. . .|.++++...-.+.+.++++||+++.|... . +...++..++... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 37899999211 1 122344444445568899999999988742 1 2223333332111 37999999999
Q ss_pred ccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhh
Q 024423 84 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 163 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW 163 (268)
. ++++|..+.+.... |
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~-----------------------~ 95 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGS-----------------------G 95 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCcc-----------------------c
Confidence 7 78889854331100 0
Q ss_pred cCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeE
Q 024423 164 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYE 213 (268)
Q Consensus 164 sdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 213 (268)
.+. . .+.+.+.+++++.++++++.||...+..+.
T Consensus 96 ~~~---------------~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 96 RER---------------L-LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred ccc---------------C-CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 000 0 145678888999999999999999876544
No 50
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.73 E-value=2e-07 Score=81.23 Aligned_cols=67 Identities=22% Similarity=0.191 Sum_probs=48.2
Q ss_pred EEEEecCCCCH------HHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcccc
Q 024423 16 FVFAGDVHGQY------SDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 16 i~viGDiHG~~------~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 85 (268)
|.+++|+|.++ ..+.++++.+.-...+.+|+.||++++.+.+.+.+..+.++ .+..+++++||||..
T Consensus 2 i~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 2 IAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred EEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 38999999653 23566666555455778999999999876666655555442 345799999999975
No 51
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.59 E-value=3.8e-06 Score=72.15 Aligned_cols=68 Identities=22% Similarity=0.192 Sum_probs=41.2
Q ss_pred EEEEecCCC----CHHHH----HHHHHhcCCCCCceEEEeCCccCCCCCcH--HHHH-HHHHhhhhCCCeEEEecCCccc
Q 024423 16 FVFAGDVHG----QYSDL----LRLFEYGGYPPKANYLFLGDYVDRGKQSL--ETIC-LLLAYKIKYPENFFLLRGNHEC 84 (268)
Q Consensus 16 i~viGDiHG----~~~~l----~~~l~~~~~~~~~~~vflGD~vDrG~~s~--evl~-~l~~lk~~~p~~v~~lrGNHE~ 84 (268)
++++||+|- ....+ ..+++.+.-...+.+|++||++|.+.... +.+. .+..|. ..+-.++.++||||.
T Consensus 3 ~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNHD~ 81 (214)
T cd07399 3 LAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNHDL 81 (214)
T ss_pred EEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCCcc
Confidence 389999994 22223 33444443344577889999999988432 2222 222221 134458999999994
No 52
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.58 E-value=4.6e-06 Score=69.24 Aligned_cols=156 Identities=15% Similarity=0.133 Sum_probs=95.1
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchh
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD 95 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~ 95 (268)
+.|+||.||...+..+..+.......+.+|.+||++...+. ..+..- ...+++.++||.|.....
T Consensus 4 ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~--~~l~~~------~~~~i~~V~GN~D~~~~~------- 68 (172)
T COG0622 4 ILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL--DALEGG------LAAKLIAVRGNCDGEVDQ------- 68 (172)
T ss_pred EEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch--HHhhcc------cccceEEEEccCCCcccc-------
Confidence 48999999999766666666556677888999999986553 211110 235799999999986432
Q ss_pred HHHHHhhHHHHHHhchhhhcCCeEE--EEc-CeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhhcCCCCCCCC
Q 024423 96 ECKRRFNVRLWKAFTDCFNCLPVAA--LID-EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKG 172 (268)
Q Consensus 96 e~~~~~~~~~~~~~~~~~~~lP~~~--~i~-~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~ 172 (268)
..+|... .++ -+++++||......
T Consensus 69 ------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~----------------------------------- 95 (172)
T COG0622 69 ------------------EELPEELVLEVGGVKIFLTHGHLYFVK----------------------------------- 95 (172)
T ss_pred ------------------ccCChhHeEEECCEEEEEECCCccccc-----------------------------------
Confidence 1122221 233 58999999643200
Q ss_pred ccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCC--CCcEEEEEEcCC-ceEE
Q 024423 173 WGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEF--DNAGAMMSIDEE-LVCS 249 (268)
Q Consensus 173 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~--~n~ga~l~i~~~-~~~~ 249 (268)
.....+..+.+..+++.+|.||+..+. ++.. ++ +++-+|.-+... .+..+++.++.+ .++.
T Consensus 96 -----------~~~~~l~~la~~~~~Dvli~GHTH~p~-~~~~-~~---i~~vNPGS~s~pr~~~~~sy~il~~~~~~~~ 159 (172)
T COG0622 96 -----------TDLSLLEYLAKELGADVLIFGHTHKPV-AEKV-GG---ILLVNPGSVSGPRGGNPASYAILDVDNLEVE 159 (172)
T ss_pred -----------cCHHHHHHHHHhcCCCEEEECCCCccc-EEEE-CC---EEEEcCCCcCCCCCCCCcEEEEEEcCCCEEE
Confidence 122346667777889999999999864 3322 22 344444443322 234456666654 4454
Q ss_pred EEEEcc
Q 024423 250 FQILKP 255 (268)
Q Consensus 250 ~~~~~~ 255 (268)
...+..
T Consensus 160 ~~~~~~ 165 (172)
T COG0622 160 VLFLER 165 (172)
T ss_pred EEEeec
Confidence 444433
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.48 E-value=6.7e-06 Score=69.56 Aligned_cols=68 Identities=12% Similarity=0.049 Sum_probs=42.8
Q ss_pred EEEEecCCCCHH------------HHHHHHHhcCCCCCceEEEeCCccCCCCCc---HHHHHHHHHhhhhCCCeEEEecC
Q 024423 16 FVFAGDVHGQYS------------DLLRLFEYGGYPPKANYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLLRG 80 (268)
Q Consensus 16 i~viGDiHG~~~------------~l~~~l~~~~~~~~~~~vflGD~vDrG~~s---~evl~~l~~lk~~~p~~v~~lrG 80 (268)
+++++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+++......-.++++.|
T Consensus 5 i~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~G 84 (199)
T cd07383 5 ILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFG 84 (199)
T ss_pred EEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECc
Confidence 389999994221 122222222334557899999999976653 55555554433334557899999
Q ss_pred Ccc
Q 024423 81 NHE 83 (268)
Q Consensus 81 NHE 83 (268)
|||
T Consensus 85 NHD 87 (199)
T cd07383 85 NHD 87 (199)
T ss_pred cCC
Confidence 999
No 54
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.46 E-value=6e-06 Score=72.78 Aligned_cols=70 Identities=14% Similarity=0.102 Sum_probs=42.9
Q ss_pred EEEEecCCCCH----------------HHHHHHHHhcCC--CCCceEEEeCCccCCCCCcH---HHHHHHHH-hhh-hCC
Q 024423 16 FVFAGDVHGQY----------------SDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSL---ETICLLLA-YKI-KYP 72 (268)
Q Consensus 16 i~viGDiHG~~----------------~~l~~~l~~~~~--~~~~~~vflGD~vDrG~~s~---evl~~l~~-lk~-~~p 72 (268)
++++||+|-.. ..|+++++.+.- +..+-++++||+++.|...- +....+.+ ++. ..+
T Consensus 7 f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (262)
T cd07395 7 FIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDPD 86 (262)
T ss_pred EEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccCC
Confidence 37889999542 235566665533 25567889999999887531 11122211 111 124
Q ss_pred CeEEEecCCcccc
Q 024423 73 ENFFLLRGNHECA 85 (268)
Q Consensus 73 ~~v~~lrGNHE~~ 85 (268)
..++.++||||..
T Consensus 87 vp~~~i~GNHD~~ 99 (262)
T cd07395 87 IPLVCVCGNHDVG 99 (262)
T ss_pred CcEEEeCCCCCCC
Confidence 5699999999974
No 55
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.44 E-value=1.4e-05 Score=70.86 Aligned_cols=72 Identities=19% Similarity=0.186 Sum_probs=49.1
Q ss_pred EEEEecCC-C------------CHHHHHHHHHhcCCCCCceEEEeCCccCCCCC-cHHHHHHHHHhhhhCCCeEEEecCC
Q 024423 16 FVFAGDVH-G------------QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRGN 81 (268)
Q Consensus 16 i~viGDiH-G------------~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~-s~evl~~l~~lk~~~p~~v~~lrGN 81 (268)
+.++||+| + ....+.++++.+.....+.+|++||++++|.. +.+-+..+.+.-...+..++.++||
T Consensus 3 ~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~GN 82 (267)
T cd07396 3 FGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLGN 82 (267)
T ss_pred EEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecCc
Confidence 38999999 2 24566777776654556789999999998873 2233333333323344579999999
Q ss_pred ccccch
Q 024423 82 HECASI 87 (268)
Q Consensus 82 HE~~~~ 87 (268)
||....
T Consensus 83 HD~~~~ 88 (267)
T cd07396 83 HDLYNP 88 (267)
T ss_pred cccccc
Confidence 998643
No 56
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.44 E-value=1.2e-05 Score=71.47 Aligned_cols=68 Identities=15% Similarity=0.068 Sum_probs=46.0
Q ss_pred EEEEecCC-C-----------CHHHHHHHHHhcCC--CCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCC
Q 024423 16 FVFAGDVH-G-----------QYSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 81 (268)
Q Consensus 16 i~viGDiH-G-----------~~~~l~~~l~~~~~--~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGN 81 (268)
++.|+|+| . ....|.++++.+.. +..+-+|+.||++|.|. .+-+..+.+.-.+.+..+++++||
T Consensus 17 i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~GN 94 (275)
T PRK11148 17 ILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLPGN 94 (275)
T ss_pred EEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeCCC
Confidence 48999999 1 24667788876533 24577889999999874 233333333223445679999999
Q ss_pred cccc
Q 024423 82 HECA 85 (268)
Q Consensus 82 HE~~ 85 (268)
||..
T Consensus 95 HD~~ 98 (275)
T PRK11148 95 HDFQ 98 (275)
T ss_pred CCCh
Confidence 9973
No 57
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.42 E-value=4.3e-06 Score=72.43 Aligned_cols=68 Identities=24% Similarity=0.247 Sum_probs=45.0
Q ss_pred EEEEecCCCC------------HHHHHHHHHhcCCC--CCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCC
Q 024423 16 FVFAGDVHGQ------------YSDLLRLFEYGGYP--PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 81 (268)
Q Consensus 16 i~viGDiHG~------------~~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGN 81 (268)
+++++|+|=. ...|.++++.+.-. ..+-+|++||+++.|.. +....+.+...+.+..++.++||
T Consensus 2 ~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p~~~v~GN 79 (240)
T cd07402 2 LAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSP--ESYERLRELLAALPIPVYLLPGN 79 (240)
T ss_pred EEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCH--HHHHHHHHHHhhcCCCEEEeCCC
Confidence 3899999933 34677777765443 56778999999998753 22222222222335579999999
Q ss_pred cccc
Q 024423 82 HECA 85 (268)
Q Consensus 82 HE~~ 85 (268)
||..
T Consensus 80 HD~~ 83 (240)
T cd07402 80 HDDR 83 (240)
T ss_pred CCCH
Confidence 9974
No 58
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.38 E-value=9.1e-07 Score=78.72 Aligned_cols=68 Identities=22% Similarity=0.142 Sum_probs=49.1
Q ss_pred EEEEecCCCC----HHHHHHHHHhcCCCCCceEEEeCCccCCC-C-CcHHHHHHHHHhhhhCCCeEEEecCCcccc
Q 024423 16 FVFAGDVHGQ----YSDLLRLFEYGGYPPKANYLFLGDYVDRG-K-QSLETICLLLAYKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 16 i~viGDiHG~----~~~l~~~l~~~~~~~~~~~vflGD~vDrG-~-~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 85 (268)
+++++|+|.. ...+.++++.+.-.+.+.++++||++|++ + ..-++...+..++.. ..++++.||||..
T Consensus 52 I~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 52 ILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred EEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 3999999976 55677777766556678899999999953 2 223445555555533 3599999999974
No 59
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.34 E-value=2.2e-06 Score=73.04 Aligned_cols=69 Identities=25% Similarity=0.351 Sum_probs=38.9
Q ss_pred EEEecCC---CCHHH---HHHHHHhcCCCCCceEEEeCCccCCC--C-----CcH-HHHHHHHHhhhhCCCeEEEecCCc
Q 024423 17 VFAGDVH---GQYSD---LLRLFEYGGYPPKANYLFLGDYVDRG--K-----QSL-ETICLLLAYKIKYPENFFLLRGNH 82 (268)
Q Consensus 17 ~viGDiH---G~~~~---l~~~l~~~~~~~~~~~vflGD~vDrG--~-----~s~-evl~~l~~lk~~~p~~v~~lrGNH 82 (268)
++|||+| +.... +..+++.......+.+|++||++|.. + ... +.+..++.+. ..+..++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 4789999 22111 22222221113567899999999842 1 111 2222333322 3556899999999
Q ss_pred cccc
Q 024423 83 ECAS 86 (268)
Q Consensus 83 E~~~ 86 (268)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9754
No 60
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.32 E-value=1.2e-06 Score=74.96 Aligned_cols=69 Identities=28% Similarity=0.250 Sum_probs=50.4
Q ss_pred EEEEecCCCCHH----HHHHHHHhcCCCCCceEEEeCCccCCCCCcH-HHHHHHHHhhhhCCCeEEEecCCccccc
Q 024423 16 FVFAGDVHGQYS----DLLRLFEYGGYPPKANYLFLGDYVDRGKQSL-ETICLLLAYKIKYPENFFLLRGNHECAS 86 (268)
Q Consensus 16 i~viGDiHG~~~----~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~-evl~~l~~lk~~~p~~v~~lrGNHE~~~ 86 (268)
+++++|+|.... .+.++++.+.....+.++++||++|.+.... +...++..++ .+..++++.||||...
T Consensus 4 i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 4 IAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred EEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 389999998643 6777777665555678889999999987664 4444444432 3456999999999864
No 61
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.32 E-value=8.6e-06 Score=70.78 Aligned_cols=68 Identities=24% Similarity=0.179 Sum_probs=40.4
Q ss_pred EEEEecCCCC--------------HHHHHHHHHhcC--CCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEec
Q 024423 16 FVFAGDVHGQ--------------YSDLLRLFEYGG--YPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 79 (268)
Q Consensus 16 i~viGDiHG~--------------~~~l~~~l~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lr 79 (268)
|++++|||-. .+-+.++.+... .++.|.+|+.||++++++.. +....+..++. .+..+++++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEe
Confidence 3789999955 122233333211 23677888999999887633 22222222221 234589999
Q ss_pred CCcccc
Q 024423 80 GNHECA 85 (268)
Q Consensus 80 GNHE~~ 85 (268)
||||..
T Consensus 79 GNHD~~ 84 (232)
T cd07393 79 GNHDYW 84 (232)
T ss_pred CCcccc
Confidence 999973
No 62
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.28 E-value=6.3e-06 Score=71.03 Aligned_cols=198 Identities=19% Similarity=0.257 Sum_probs=101.7
Q ss_pred EEecCCCC------HHHHHHHHHhcCCCCCceEEEeCCccCC--CCC-----cHHHHHHHHHhhhhCCCeEEEecCCccc
Q 024423 18 FAGDVHGQ------YSDLLRLFEYGGYPPKANYLFLGDYVDR--GKQ-----SLETICLLLAYKIKYPENFFLLRGNHEC 84 (268)
Q Consensus 18 viGDiHG~------~~~l~~~l~~~~~~~~~~~vflGD~vDr--G~~-----s~evl~~l~~lk~~~p~~v~~lrGNHE~ 84 (268)
+|||+|=. .+.|.+.|+... +..+.++++||++|- |.+ --+|...+..+ .+.+.+++++.||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchHH
Confidence 68999922 344556666433 356789999999972 332 13334444333 3567899999999995
Q ss_pred cchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEE---cCeEEEecCCCCCC-CCcHHhhhc-----------CCCC
Q 024423 85 ASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALI---DEKILCMHGGLSPD-LSHLDQIRN-----------LPRP 149 (268)
Q Consensus 85 ~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHgGi~p~-~~~~~~i~~-----------i~r~ 149 (268)
..-+ +++. -..-+.-+|-..++ +.+++++||-.--. ...-.+.+. ++.|
T Consensus 80 ll~~-----------~f~~-----~~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl~ 143 (237)
T COG2908 80 LLGK-----------RFAQ-----EAGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNLP 143 (237)
T ss_pred HHHH-----------HHHh-----hcCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHhH
Confidence 4321 1110 00012334444333 56999999964211 111111111 1111
Q ss_pred CCCCCchhHhHhhhcCCCCCCCCccccCCCcee---eeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecC
Q 024423 150 TAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSY---TFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSA 226 (268)
Q Consensus 150 ~~~~~~~~~~~llWsdp~~~~~~~~~~~rg~~~---~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa 226 (268)
+. -..-...-+|+.. .|........+ -..++++.+-+++++++.+|.||+..+..-....-.+ |-.
T Consensus 144 l~--~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~y-i~l--- 212 (237)
T COG2908 144 LR--VRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITY-INL--- 212 (237)
T ss_pred HH--HHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceE-Eec---
Confidence 11 0001112244443 11111111111 2456678888899999999999999876544322111 111
Q ss_pred CCCCCCCCCcEEEEEEcCCceE
Q 024423 227 PNYCGEFDNAGAMMSIDEELVC 248 (268)
Q Consensus 227 ~~y~~~~~n~ga~l~i~~~~~~ 248 (268)
|.--..+++++++.+...
T Consensus 213 ----GdW~~~~s~~~v~~~~~~ 230 (237)
T COG2908 213 ----GDWVSEGSILEVDDGGLE 230 (237)
T ss_pred ----CcchhcceEEEEecCcEE
Confidence 111245788888887543
No 63
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.27 E-value=2.4e-06 Score=70.77 Aligned_cols=58 Identities=19% Similarity=0.131 Sum_probs=35.1
Q ss_pred HHHHHHhcCCCCCceEEEeCCccCCCCCcH-HHHHHH-HHhhhhCCCeEEEecCCccccc
Q 024423 29 LLRLFEYGGYPPKANYLFLGDYVDRGKQSL-ETICLL-LAYKIKYPENFFLLRGNHECAS 86 (268)
Q Consensus 29 l~~~l~~~~~~~~~~~vflGD~vDrG~~s~-evl~~l-~~lk~~~p~~v~~lrGNHE~~~ 86 (268)
+.++.+.+...+.+.+|++||++|....+. +....+ .......+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 444455444455688999999998654322 221211 1112234567999999999854
No 64
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.27 E-value=1.5e-05 Score=76.86 Aligned_cols=109 Identities=19% Similarity=0.267 Sum_probs=58.9
Q ss_pred EEEEecCC-CCH----HHHHHHHHhcC---------CCCCceEEEeCCccCC-CCCc---------------HHHHHHHH
Q 024423 16 FVFAGDVH-GQY----SDLLRLFEYGG---------YPPKANYLFLGDYVDR-GKQS---------------LETICLLL 65 (268)
Q Consensus 16 i~viGDiH-G~~----~~l~~~l~~~~---------~~~~~~~vflGD~vDr-G~~s---------------~evl~~l~ 65 (268)
+++++|+| |.. ..+..+++.+. ....+.+|++||++|. |+.+ .++..++.
T Consensus 246 i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~L~ 325 (504)
T PRK04036 246 AVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEYLK 325 (504)
T ss_pred EEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHHHH
Confidence 38999999 542 23444444332 2234679999999995 3211 12333444
Q ss_pred HhhhhCCCeEEEecCCccccchhhhc-cchhHHHHHhhHHHHHH-hchhhhcCCeEEEEcC-eEEEecCC
Q 024423 66 AYKIKYPENFFLLRGNHECASINRIY-GFYDECKRRFNVRLWKA-FTDCFNCLPVAALIDE-KILCMHGG 132 (268)
Q Consensus 66 ~lk~~~p~~v~~lrGNHE~~~~~~~~-~f~~e~~~~~~~~~~~~-~~~~~~~lP~~~~i~~-~~l~vHgG 132 (268)
++. ..-.|++++||||........ .+. +.+ .+.+.. -..++.. |....+++ +++++||-
T Consensus 326 ~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~----~~l-~~~l~~~~v~~lsN-P~~i~l~G~~iLl~HG~ 387 (504)
T PRK04036 326 QIP--EDIKIIISPGNHDAVRQAEPQPAFP----EEI-RSLFPEHNVTFVSN-PALVNLHGVDVLIYHGR 387 (504)
T ss_pred hhh--cCCeEEEecCCCcchhhccCCCCcc----HHH-HHhcCcCCeEEecC-CeEEEECCEEEEEECCC
Confidence 332 345799999999976532211 111 111 111211 2334444 65544444 78999995
No 65
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.13 E-value=3.1e-05 Score=63.25 Aligned_cols=48 Identities=25% Similarity=0.242 Sum_probs=29.9
Q ss_pred CCCceEEEeCCccCCCCCc-HHHH-HHHHHhhhh---C-CCeEEEecCCccccc
Q 024423 39 PPKANYLFLGDYVDRGKQS-LETI-CLLLAYKIK---Y-PENFFLLRGNHECAS 86 (268)
Q Consensus 39 ~~~~~~vflGD~vDrG~~s-~evl-~~l~~lk~~---~-p~~v~~lrGNHE~~~ 86 (268)
...+.+|++||++|.+..+ .+.. ..+..++.. . +..+++++||||...
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4567899999999987642 2222 222222211 1 356999999999753
No 66
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.10 E-value=1.2e-05 Score=70.99 Aligned_cols=71 Identities=23% Similarity=0.238 Sum_probs=42.6
Q ss_pred EEEEecCCCCH------HHH-HHHHHhcCCCCCceEEEeCCccCCCCCc-------H----HHHHHHHHhhhhCCCeEEE
Q 024423 16 FVFAGDVHGQY------SDL-LRLFEYGGYPPKANYLFLGDYVDRGKQS-------L----ETICLLLAYKIKYPENFFL 77 (268)
Q Consensus 16 i~viGDiHG~~------~~l-~~~l~~~~~~~~~~~vflGD~vDrG~~s-------~----evl~~l~~lk~~~p~~v~~ 77 (268)
++.++|+|-.. ... ..+++.+.....+.+|++||++|++... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 47899999421 112 3344444444567889999999976521 1 1122222222223567999
Q ss_pred ecCCccccc
Q 024423 78 LRGNHECAS 86 (268)
Q Consensus 78 lrGNHE~~~ 86 (268)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999964
No 67
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.07 E-value=9.4e-05 Score=65.37 Aligned_cols=71 Identities=20% Similarity=0.223 Sum_probs=51.4
Q ss_pred EEEEecCCCC------HHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhh--hCCCeEEEecCCccccch
Q 024423 16 FVFAGDVHGQ------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKI--KYPENFFLLRGNHECASI 87 (268)
Q Consensus 16 i~viGDiHG~------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~--~~p~~v~~lrGNHE~~~~ 87 (268)
++.|+|+|-. ...+.++++.+...+.|.+|+.||+.++|.. +-...+..+.. ..+..+++++||||.+..
T Consensus 3 i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~--~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~~ 80 (301)
T COG1409 3 IAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEP--EEYRRLKELLARLELPAPVIVVPGNHDARVV 80 (301)
T ss_pred EEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCH--HHHHHHHHHHhhccCCCceEeeCCCCcCCch
Confidence 3889999965 3456666777776667889999999999642 22233333322 567789999999999876
Q ss_pred h
Q 024423 88 N 88 (268)
Q Consensus 88 ~ 88 (268)
+
T Consensus 81 ~ 81 (301)
T COG1409 81 N 81 (301)
T ss_pred H
Confidence 5
No 68
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.02 E-value=1.6e-05 Score=70.16 Aligned_cols=70 Identities=23% Similarity=0.333 Sum_probs=46.8
Q ss_pred EEEecCC-CC-----------HHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHH----HHHHHhhhhCCCeEEEecC
Q 024423 17 VFAGDVH-GQ-----------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLLRG 80 (268)
Q Consensus 17 ~viGDiH-G~-----------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl----~~l~~lk~~~p~~v~~lrG 80 (268)
+.++|+| |. ...|.++++.+.-...+.+++.||++|+...+.+.. .++..|+...|-.++++.|
T Consensus 4 lh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i~G 83 (253)
T TIGR00619 4 LHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVISG 83 (253)
T ss_pred EEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 8899999 32 234555665554455788999999999876554432 2333443333357999999
Q ss_pred Cccccc
Q 024423 81 NHECAS 86 (268)
Q Consensus 81 NHE~~~ 86 (268)
|||...
T Consensus 84 NHD~~~ 89 (253)
T TIGR00619 84 NHDSAQ 89 (253)
T ss_pred CCCChh
Confidence 999853
No 69
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.01 E-value=2.1e-05 Score=64.87 Aligned_cols=66 Identities=26% Similarity=0.346 Sum_probs=42.9
Q ss_pred EEEecCCCCHHHH---------------HHHHHhcC--CCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEec
Q 024423 17 VFAGDVHGQYSDL---------------LRLFEYGG--YPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 79 (268)
Q Consensus 17 ~viGDiHG~~~~l---------------~~~l~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lr 79 (268)
++++|+|=..... .++++.+. ..+.+.+|++||+++++..+.. +..+.+ .+..+++++
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v~ 76 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLIK 76 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEEe
Confidence 7899999433321 22333221 2356889999999999986543 334333 345699999
Q ss_pred CCccccch
Q 024423 80 GNHECASI 87 (268)
Q Consensus 80 GNHE~~~~ 87 (268)
||||....
T Consensus 77 GNHD~~~~ 84 (168)
T cd07390 77 GNHDSSLE 84 (168)
T ss_pred CCCCchhh
Confidence 99997654
No 70
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.91 E-value=2.8e-05 Score=71.52 Aligned_cols=70 Identities=23% Similarity=0.307 Sum_probs=47.1
Q ss_pred EEEecCC-C-----------CHHHHHHHHHhcCCCCCceEEEeCCccCCC-CCcHHHHHHHHH----hhhhCCCeEEEec
Q 024423 17 VFAGDVH-G-----------QYSDLLRLFEYGGYPPKANYLFLGDYVDRG-KQSLETICLLLA----YKIKYPENFFLLR 79 (268)
Q Consensus 17 ~viGDiH-G-----------~~~~l~~~l~~~~~~~~~~~vflGD~vDrG-~~s~evl~~l~~----lk~~~p~~v~~lr 79 (268)
+.+||+| | ....|.++++.+.-...+.+++.||++|+. +.+.+.+.++.. .....+-.+++|.
T Consensus 4 lhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~I~ 83 (340)
T PHA02546 4 LLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHVLV 83 (340)
T ss_pred EEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEEEc
Confidence 8899999 4 234556666655555668899999999985 445454444332 1123456799999
Q ss_pred CCccccc
Q 024423 80 GNHECAS 86 (268)
Q Consensus 80 GNHE~~~ 86 (268)
||||...
T Consensus 84 GNHD~~~ 90 (340)
T PHA02546 84 GNHDMYY 90 (340)
T ss_pred cCCCccc
Confidence 9999743
No 71
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.89 E-value=0.00018 Score=64.27 Aligned_cols=68 Identities=19% Similarity=0.190 Sum_probs=39.8
Q ss_pred EEEEecCCC----CHHHHHHHHHhcCCCCCceEEEeCCccCCC-CCc---HHH-HHHHHHhhhhCCCeEEEecCCccccc
Q 024423 16 FVFAGDVHG----QYSDLLRLFEYGGYPPKANYLFLGDYVDRG-KQS---LET-ICLLLAYKIKYPENFFLLRGNHECAS 86 (268)
Q Consensus 16 i~viGDiHG----~~~~l~~~l~~~~~~~~~~~vflGD~vDrG-~~s---~ev-l~~l~~lk~~~p~~v~~lrGNHE~~~ 86 (268)
++|+||.|. ....+.++.+. ....+-++++||+++.+ ..+ .+. +..+..+. ..-.++.++||||...
T Consensus 7 f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~~ 82 (294)
T cd00839 7 FAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA--SYVPYMVTPGNHEADY 82 (294)
T ss_pred EEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHH--hcCCcEEcCccccccc
Confidence 489999995 33334444333 24456788999999544 321 121 22222221 2345899999999865
Q ss_pred h
Q 024423 87 I 87 (268)
Q Consensus 87 ~ 87 (268)
.
T Consensus 83 ~ 83 (294)
T cd00839 83 N 83 (294)
T ss_pred C
Confidence 3
No 72
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.88 E-value=3.5e-05 Score=68.24 Aligned_cols=70 Identities=19% Similarity=0.254 Sum_probs=45.3
Q ss_pred EEEEecCCCCHHHHHHHHHh---cCCCCCceEEEeCCccCCCCC-cHHHH----------HHHHH--hhhhCCCeEEEec
Q 024423 16 FVFAGDVHGQYSDLLRLFEY---GGYPPKANYLFLGDYVDRGKQ-SLETI----------CLLLA--YKIKYPENFFLLR 79 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~---~~~~~~~~~vflGD~vDrG~~-s~evl----------~~l~~--lk~~~p~~v~~lr 79 (268)
|+|+||+||+++.+.+.++. ....+.+-+|++||+-..+.. ..+.+ .+.-. -....|-.+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 48999999999998765443 233567788999999754432 22221 11111 1223566689999
Q ss_pred CCcccc
Q 024423 80 GNHECA 85 (268)
Q Consensus 80 GNHE~~ 85 (268)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 73
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.84 E-value=3.5e-05 Score=65.66 Aligned_cols=73 Identities=25% Similarity=0.346 Sum_probs=49.1
Q ss_pred EEEEecCC-CC--------------HHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhh---CCCeEEE
Q 024423 16 FVFAGDVH-GQ--------------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFL 77 (268)
Q Consensus 16 i~viGDiH-G~--------------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~---~p~~v~~ 77 (268)
++.++|+| |. +..|.++++.+.....+.+|+.||++|....+.+.+..+...-.+ ....+++
T Consensus 2 i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (223)
T cd00840 2 FLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVFI 81 (223)
T ss_pred eEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
Confidence 38899999 32 224666766655556678999999999876555544443332222 2457999
Q ss_pred ecCCccccchh
Q 024423 78 LRGNHECASIN 88 (268)
Q Consensus 78 lrGNHE~~~~~ 88 (268)
+.||||.....
T Consensus 82 ~~GNHD~~~~~ 92 (223)
T cd00840 82 IAGNHDSPSRL 92 (223)
T ss_pred ecCCCCCcccc
Confidence 99999986543
No 74
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.76 E-value=8.5e-05 Score=64.39 Aligned_cols=69 Identities=17% Similarity=0.173 Sum_probs=43.0
Q ss_pred CCeEEEEecCC-CCHHH----------------HHHHHHhcCCCCCceEEEeCCccCCCCCc---HHHHHHHHHhhhhCC
Q 024423 13 KPLFVFAGDVH-GQYSD----------------LLRLFEYGGYPPKANYLFLGDYVDRGKQS---LETICLLLAYKIKYP 72 (268)
Q Consensus 13 ~p~i~viGDiH-G~~~~----------------l~~~l~~~~~~~~~~~vflGD~vDrG~~s---~evl~~l~~lk~~~p 72 (268)
... .+|+|+| |.-.. |.++.+.......+.+|++||+.+..... .++..++..+ .
T Consensus 15 ~~~-LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~ 89 (225)
T TIGR00024 15 GDK-AVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----F 89 (225)
T ss_pred cCe-EEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----C
Confidence 556 8999999 54332 23333333334567899999999765442 2222333332 2
Q ss_pred CeEEEecCCccccc
Q 024423 73 ENFFLLRGNHECAS 86 (268)
Q Consensus 73 ~~v~~lrGNHE~~~ 86 (268)
..+++++||||...
T Consensus 90 ~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 90 RDLILIRGNHDALI 103 (225)
T ss_pred CcEEEECCCCCCcc
Confidence 47999999999754
No 75
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.75 E-value=0.00037 Score=67.58 Aligned_cols=42 Identities=24% Similarity=0.377 Sum_probs=35.9
Q ss_pred CceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccch
Q 024423 41 KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 87 (268)
Q Consensus 41 ~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 87 (268)
-+.+-++||+.||||.+-.+++.|+.. .+|=+-.||||...+
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWM 226 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWM 226 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHH
Confidence 467889999999999999999999865 268899999997544
No 76
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.65 E-value=0.00049 Score=57.07 Aligned_cols=49 Identities=22% Similarity=0.254 Sum_probs=31.3
Q ss_pred CCCCceEEEeCCccCCCCCcH--H---HHHHHHHhhh-h----CCCeEEEecCCccccc
Q 024423 38 YPPKANYLFLGDYVDRGKQSL--E---TICLLLAYKI-K----YPENFFLLRGNHECAS 86 (268)
Q Consensus 38 ~~~~~~~vflGD~vDrG~~s~--e---vl~~l~~lk~-~----~p~~v~~lrGNHE~~~ 86 (268)
....+.+|++||++|.+.... + .+..+..+.. . .+..+++++||||...
T Consensus 43 ~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 43 RLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred hcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 345678999999999887432 2 2222222211 1 1456999999999864
No 77
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.62 E-value=0.00082 Score=54.58 Aligned_cols=119 Identities=19% Similarity=0.246 Sum_probs=79.8
Q ss_pred EEEecCCCCHHHHHHHHHhcC--CCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccch
Q 024423 17 VFAGDVHGQYSDLLRLFEYGG--YPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 94 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 94 (268)
+|+||+||+++.+.+-++... -.+-+.++++||+..-...+-+ +.-...=....|-..+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 389999999999987776532 2345678899999975555433 33333334567888999999997
Q ss_pred hHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhhcCCCCCCCCcc
Q 024423 95 DECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWG 174 (268)
Q Consensus 95 ~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~ 174 (268)
+-.+|++|. .|.- +.+..++ ..+
T Consensus 69 ----------------------------~~DILlTh~--wP~g--i~~~~~~----------------~~~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSE--WPKG--ISKLSKV----------------PFE--------- 91 (150)
T ss_pred ----------------------------CCCEEECCC--Cchh--hhhhCCC----------------ccc---------
Confidence 448888888 3411 1100000 000
Q ss_pred ccCCCceeeeChhhHHHHHHhCCCceEEeeeeee
Q 024423 175 MNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 208 (268)
Q Consensus 175 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~ 208 (268)
..+..-|...+++++++..-.+.+.||...
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 011235888999999999999999999754
No 78
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.61 E-value=0.00019 Score=67.39 Aligned_cols=70 Identities=19% Similarity=0.221 Sum_probs=54.0
Q ss_pred EEEecCCCC------------HHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhh--------------
Q 024423 17 VFAGDVHGQ------------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIK-------------- 70 (268)
Q Consensus 17 ~viGDiHG~------------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~-------------- 70 (268)
++++|+|-- +..|.++++.+.-...|-+|+.||++|+..-|.+++..++.+-.+
T Consensus 7 lh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~~Ls 86 (405)
T TIGR00583 7 LVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELEFLS 86 (405)
T ss_pred EEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchhhcc
Confidence 899999932 557788888776666788999999999999888887665443221
Q ss_pred ----------------------CCCeEEEecCCccccc
Q 024423 71 ----------------------YPENFFLLRGNHECAS 86 (268)
Q Consensus 71 ----------------------~p~~v~~lrGNHE~~~ 86 (268)
..-.|++|-||||...
T Consensus 87 d~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 87 DASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred chhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 2347999999999965
No 79
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.61 E-value=0.00023 Score=61.06 Aligned_cols=71 Identities=18% Similarity=0.226 Sum_probs=43.7
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHH-------------------------HHHHHHhhhh
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLET-------------------------ICLLLAYKIK 70 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~ev-------------------------l~~l~~lk~~ 70 (268)
|++++|.||+++.+.++.+.+.-...|-++|+||++-....+-|- ++-++.....
T Consensus 8 ilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L~~ 87 (255)
T PF14582_consen 8 ILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRILGE 87 (255)
T ss_dssp EEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHHHC
T ss_pred heeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHHHh
Confidence 489999999999999999877666778899999998644433332 2233333335
Q ss_pred CCCeEEEecCCccccc
Q 024423 71 YPENFFLLRGNHECAS 86 (268)
Q Consensus 71 ~p~~v~~lrGNHE~~~ 86 (268)
.+-.+++|+||||...
T Consensus 88 ~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 88 LGVPVFVVPGNMDAPE 103 (255)
T ss_dssp C-SEEEEE--TTS-SH
T ss_pred cCCcEEEecCCCCchH
Confidence 6678999999999864
No 80
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.45 E-value=0.00026 Score=66.60 Aligned_cols=69 Identities=22% Similarity=0.301 Sum_probs=44.7
Q ss_pred EEEecCC-CC-------HHH----HHHHHHhcCCCCCceEEEeCCccCCCCCcHHHH----HHHHHhhhhCCCeEEEecC
Q 024423 17 VFAGDVH-GQ-------YSD----LLRLFEYGGYPPKANYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLLRG 80 (268)
Q Consensus 17 ~viGDiH-G~-------~~~----l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl----~~l~~lk~~~p~~v~~lrG 80 (268)
+.++|+| |. ..+ |..+++.+.-...+.+|+.||++|++..+.+.. .++..|+ ..+-.++++.|
T Consensus 4 lh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~-~~~~~v~~I~G 82 (407)
T PRK10966 4 LHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQ-QTGCQLVVLAG 82 (407)
T ss_pred EEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHH-hcCCcEEEEcC
Confidence 8899999 42 111 334445444456788999999999986554332 2333343 23456999999
Q ss_pred Cccccc
Q 024423 81 NHECAS 86 (268)
Q Consensus 81 NHE~~~ 86 (268)
|||...
T Consensus 83 NHD~~~ 88 (407)
T PRK10966 83 NHDSVA 88 (407)
T ss_pred CCCChh
Confidence 999753
No 81
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.45 E-value=0.00035 Score=62.61 Aligned_cols=71 Identities=24% Similarity=0.254 Sum_probs=48.2
Q ss_pred EEEEecCCCCHHH--HHHHHHhcCCCCCceEEEeCCccCC-CCCcHHH-HHHHHHhhhhCCCeEEEecCCccccchh
Q 024423 16 FVFAGDVHGQYSD--LLRLFEYGGYPPKANYLFLGDYVDR-GKQSLET-ICLLLAYKIKYPENFFLLRGNHECASIN 88 (268)
Q Consensus 16 i~viGDiHG~~~~--l~~~l~~~~~~~~~~~vflGD~vDr-G~~s~ev-l~~l~~lk~~~p~~v~~lrGNHE~~~~~ 88 (268)
|+-++|+|-+... ..+.+........+-+++.|||+|+ .+...+. ...+..| +.|-.++++.||||...-.
T Consensus 47 iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L--~~~~gv~av~GNHd~~~~~ 121 (284)
T COG1408 47 IVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKL--KAPLGVFAVLGNHDYGVDR 121 (284)
T ss_pred EEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhh--hccCCEEEEeccccccccc
Confidence 4999999976554 3334444444444888899999996 5555444 4444444 4667899999999876533
No 82
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.42 E-value=0.00052 Score=59.93 Aligned_cols=68 Identities=21% Similarity=0.270 Sum_probs=39.3
Q ss_pred EEEecCC--CCH---HHHHHHHHhcC-CC----CCceEEEeCCccCCCCC------------c---H-HHHHHHHHhhhh
Q 024423 17 VFAGDVH--GQY---SDLLRLFEYGG-YP----PKANYLFLGDYVDRGKQ------------S---L-ETICLLLAYKIK 70 (268)
Q Consensus 17 ~viGDiH--G~~---~~l~~~l~~~~-~~----~~~~~vflGD~vDrG~~------------s---~-evl~~l~~lk~~ 70 (268)
++|||+| +.. ..++.+++.+. .. ..+.+|++||++|+... . . ++..++.+|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 5899999 331 22333443322 21 23789999999997320 0 1 1222333332
Q ss_pred CCCeEEEecCCccccc
Q 024423 71 YPENFFLLRGNHECAS 86 (268)
Q Consensus 71 ~p~~v~~lrGNHE~~~ 86 (268)
..-.|++++||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 3457999999999854
No 83
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.26 E-value=0.00066 Score=63.41 Aligned_cols=72 Identities=24% Similarity=0.267 Sum_probs=50.6
Q ss_pred EEEecCC-C------------CHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhC---CCeEEEecC
Q 024423 17 VFAGDVH-G------------QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKY---PENFFLLRG 80 (268)
Q Consensus 17 ~viGDiH-G------------~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~---p~~v~~lrG 80 (268)
+.++|.| | .+.+|..+++.+.-...|-+|+.||+.|++.-|.+++..+...-.+. .-.|++|.|
T Consensus 4 lHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I~G 83 (390)
T COG0420 4 LHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVIAG 83 (390)
T ss_pred EEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEecC
Confidence 7788999 4 24455555555555556778999999999888888776654432222 246999999
Q ss_pred Cccccchh
Q 024423 81 NHECASIN 88 (268)
Q Consensus 81 NHE~~~~~ 88 (268)
|||.....
T Consensus 84 NHD~~~~~ 91 (390)
T COG0420 84 NHDSPSRL 91 (390)
T ss_pred CCCchhcc
Confidence 99986533
No 84
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=97.12 E-value=0.0061 Score=57.64 Aligned_cols=206 Identities=18% Similarity=0.223 Sum_probs=105.1
Q ss_pred EEEecCC-CCHH----HHHHHHHhcCCC----CCce-EEEeCCccCCC-----C-------CcHHHHHHHHHhhhhCCC-
Q 024423 17 VFAGDVH-GQYS----DLLRLFEYGGYP----PKAN-YLFLGDYVDRG-----K-------QSLETICLLLAYKIKYPE- 73 (268)
Q Consensus 17 ~viGDiH-G~~~----~l~~~l~~~~~~----~~~~-~vflGD~vDrG-----~-------~s~evl~~l~~lk~~~p~- 73 (268)
+.++|+| |... .+...++.++-+ +..+ ++..||.||.. . +..+-++.+..+-.+-|.
T Consensus 229 ~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp~~ 308 (481)
T COG1311 229 ALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVPEH 308 (481)
T ss_pred EEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCCCC
Confidence 8899999 4333 333344433322 2234 45689999941 1 122233333333333443
Q ss_pred -eEEEecCCccccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcC-eEEEecCCCCCCCCcHHhhhcCCCCCC
Q 024423 74 -NFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLSHLDQIRNLPRPTA 151 (268)
Q Consensus 74 -~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~ 151 (268)
.|++.+||||........-...+. ...++...+-.|-.=|...-+++ .++..|| .+++++...-....
T Consensus 309 I~v~i~PGnhDa~r~a~PQp~~~~~----~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~~~ 378 (481)
T COG1311 309 IKVFIMPGNHDAVRQALPQPHFPEL----IKSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPGAD 378 (481)
T ss_pred ceEEEecCCCCccccccCCCCcchh----hcccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCCCC
Confidence 489999999987655332222221 12222222222333355545544 7888898 34566544322211
Q ss_pred C--CCchhHhHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCC
Q 024423 152 V--PDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNY 229 (268)
Q Consensus 152 ~--~~~~~~~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y 229 (268)
. +...+.+-+.|..-.+... |...+ -+..-+-|.=.---++++.||++. .|+....+.+++..+|.+.+
T Consensus 379 ~~~~~~ame~lLk~rHlaPtyg-------g~~p~-aP~~kD~lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q~q 449 (481)
T COG1311 379 YDSPLKAMEELLKRRHLAPTYG-------GTLPI-APETKDYLVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQEQ 449 (481)
T ss_pred ccchHHHHHHHHHhcccCCCCC-------Ccccc-ccCCcCceeeccCCcEEEEccccc-cceeEEeccceEEeeeecch
Confidence 1 1122334445544332111 11000 011111121122467899999998 78998888889999998876
Q ss_pred CCCCCCcEEEEEEcCC
Q 024423 230 CGEFDNAGAMMSIDEE 245 (268)
Q Consensus 230 ~~~~~n~ga~l~i~~~ 245 (268)
.. .+-++-|+..
T Consensus 450 Te----fqk~vni~p~ 461 (481)
T COG1311 450 TE----FQKMVNINPT 461 (481)
T ss_pred hc----cceEEEecCc
Confidence 53 4455666554
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.02 E-value=0.0013 Score=55.58 Aligned_cols=47 Identities=19% Similarity=0.342 Sum_probs=32.5
Q ss_pred CCCceEEEeCCccCCCCCcH--HHHHHHHHhhhhC----CCeEEEecCCcccc
Q 024423 39 PPKANYLFLGDYVDRGKQSL--ETICLLLAYKIKY----PENFFLLRGNHECA 85 (268)
Q Consensus 39 ~~~~~~vflGD~vDrG~~s~--evl~~l~~lk~~~----p~~v~~lrGNHE~~ 85 (268)
-..+-++|+||++|.|+.+- +....+..++..+ ...++.|.||||.-
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 35678999999999999542 3445444443222 24689999999975
No 86
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.93 E-value=0.0043 Score=50.26 Aligned_cols=67 Identities=18% Similarity=0.246 Sum_probs=42.0
Q ss_pred EEEEecCC------------CCHHHHHHHH-Hh--cCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecC
Q 024423 16 FVFAGDVH------------GQYSDLLRLF-EY--GGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 80 (268)
Q Consensus 16 i~viGDiH------------G~~~~l~~~l-~~--~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrG 80 (268)
++++||.| .+.+....++ .. .-..|+|.+.+|||+.-.-.+..+..+++- +.++++++++|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Ile----rLnGrkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILE----RLNGRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHH----HcCCcEEEeeC
Confidence 48899999 3344443332 11 113567888999999864444334333333 34688999999
Q ss_pred Cccccc
Q 024423 81 NHECAS 86 (268)
Q Consensus 81 NHE~~~ 86 (268)
|||---
T Consensus 82 NhDk~~ 87 (186)
T COG4186 82 NHDKCH 87 (186)
T ss_pred CCCCCc
Confidence 998754
No 87
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.93 E-value=0.012 Score=51.99 Aligned_cols=24 Identities=13% Similarity=0.106 Sum_probs=21.4
Q ss_pred eChhhHHHHHHhCCCceEEeeeee
Q 024423 184 FGPDKVSEFLKRHDLDLVCRAHQV 207 (268)
Q Consensus 184 fg~~~~~~fl~~~~~~~iIrgH~~ 207 (268)
-.++.+++.|++.+..+|.-||+.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 367889999999999999999986
No 88
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.91 E-value=0.0017 Score=56.63 Aligned_cols=65 Identities=26% Similarity=0.316 Sum_probs=42.5
Q ss_pred EEEEecCCCCH---------HHHHHHHHhcCCCCCc-eEEEeCCccCCCCCcH-----HHHHHHHHhhhhCCCeEEEecC
Q 024423 16 FVFAGDVHGQY---------SDLLRLFEYGGYPPKA-NYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLRG 80 (268)
Q Consensus 16 i~viGDiHG~~---------~~l~~~l~~~~~~~~~-~~vflGD~vDrG~~s~-----evl~~l~~lk~~~p~~v~~lrG 80 (268)
|+.++|+||.+ ..+.+++++..-...+ .++..||+++..+.+- .++..+.++ +.. ++..|
T Consensus 3 i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d-~~~~G 77 (252)
T cd00845 3 ILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYD-AVTIG 77 (252)
T ss_pred EEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCC-EEeec
Confidence 48899999876 5667777765443334 5677999999877643 344444333 223 35569
Q ss_pred Ccccc
Q 024423 81 NHECA 85 (268)
Q Consensus 81 NHE~~ 85 (268)
|||.-
T Consensus 78 NHe~d 82 (252)
T cd00845 78 NHEFD 82 (252)
T ss_pred ccccc
Confidence 99963
No 89
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.74 E-value=0.064 Score=43.18 Aligned_cols=163 Identities=21% Similarity=0.344 Sum_probs=101.4
Q ss_pred EEEEecCC--CCHHHHHHHHHhcCCCCC-ceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhcc
Q 024423 16 FVFAGDVH--GQYSDLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 92 (268)
Q Consensus 16 i~viGDiH--G~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 92 (268)
+.|+||+| -...+|-.-|++.=.|.. +.++++|++. |.|.++++..+. +.++++||--|.-.
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~~------ 67 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDENL------ 67 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCccc------
Confidence 47999999 344555555555445554 5688999974 678888887764 68999999776541
Q ss_pred chhHHHHHhhHHHHHHhchhhhcCCeEEEE--cC-eEEEecCCCCCCCCcHHhhhcCCCCCCCCCchhHhHhhhcCCCCC
Q 024423 93 FYDECKRRFNVRLWKAFTDCFNCLPVAALI--DE-KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRD 169 (268)
Q Consensus 93 f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i--~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~ 169 (268)
.-|..-++ +. ++-++||-. -+=|.||
T Consensus 68 ----------------------~yP~~kvvtvGqfkIG~chGhq--------------------------ViP~gd~--- 96 (183)
T KOG3325|consen 68 ----------------------KYPENKVVTVGQFKIGLCHGHQ--------------------------VIPWGDP--- 96 (183)
T ss_pred ----------------------cCCccceEEeccEEEEeecCcE--------------------------eecCCCH---
Confidence 11333222 32 889999942 1235555
Q ss_pred CCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCC-------C--CCCcEEEE
Q 024423 170 VKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCG-------E--FDNAGAMM 240 (268)
Q Consensus 170 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~-------~--~~n~ga~l 240 (268)
+++.-.-+..+++.++-||+..-+.|+. +|+. |.+|.-+- . ....=+.|
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~--eg~f---fvnPGSaTGAfn~~~t~~~~PSFvLm 154 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEH--EGKF---FVNPGSATGAFNVSDTDIIVPSFVLM 154 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEe--CCcE---EeCCCcccCCCcccccCCCCCceEEE
Confidence 3466666778999999999998777763 3332 33332221 1 11233455
Q ss_pred EEcCCceE--EEEEEccCcccccccccc
Q 024423 241 SIDEELVC--SFQILKPAEKKVKFMVST 266 (268)
Q Consensus 241 ~i~~~~~~--~~~~~~~~~~~~~~~~~~ 266 (268)
.|..+..+ .++.+.-+-+..|..|+|
T Consensus 155 Diqg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 155 DIQGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred EecCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 55555433 346677777777777765
No 90
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.70 E-value=0.007 Score=52.51 Aligned_cols=99 Identities=20% Similarity=0.259 Sum_probs=56.1
Q ss_pred CCeEEEEecCCCCHH----------------HHHHHHH-hcCCCCCceEEEeCCccCCCCC-----cHHHHHHHHHhhhh
Q 024423 13 KPLFVFAGDVHGQYS----------------DLLRLFE-YGGYPPKANYLFLGDYVDRGKQ-----SLETICLLLAYKIK 70 (268)
Q Consensus 13 ~p~i~viGDiHG~~~----------------~l~~~l~-~~~~~~~~~~vflGD~vDrG~~-----s~evl~~l~~lk~~ 70 (268)
... +|++|+|=-++ .+.+.++ .+.-...+++|++||+-.-.+. ..++-.++..++ .
T Consensus 20 ~~~-lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~-~ 97 (235)
T COG1407 20 GRT-LVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD-E 97 (235)
T ss_pred CcE-EEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-c
Confidence 456 89999993333 2233333 2223346789999999864333 234433333333 2
Q ss_pred CCCeEEEecCCccccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCC
Q 024423 71 YPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSP 135 (268)
Q Consensus 71 ~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p 135 (268)
. .+++++||||...-....++ + ...++.. . .++++++||=-.|
T Consensus 98 ~--evi~i~GNHD~~i~~~~~~~--------~----------v~v~~~~-~-i~~~~~~HGh~~~ 140 (235)
T COG1407 98 R--EVIIIRGNHDNGIEEILPGF--------N----------VEVVDEL-E-IGGLLFRHGHKEP 140 (235)
T ss_pred C--cEEEEeccCCCccccccccC--------C----------ceeeeeE-E-ecCEEEEeCCCCC
Confidence 2 59999999998653322222 1 1233333 2 4599999995433
No 91
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.40 E-value=0.005 Score=54.73 Aligned_cols=65 Identities=20% Similarity=0.232 Sum_probs=39.3
Q ss_pred EEEEecCCCCH----------------HHHHHHHHhcCCCCCceEEE-eCCccCCCCCc-----------HHHHHHHHHh
Q 024423 16 FVFAGDVHGQY----------------SDLLRLFEYGGYPPKANYLF-LGDYVDRGKQS-----------LETICLLLAY 67 (268)
Q Consensus 16 i~viGDiHG~~----------------~~l~~~l~~~~~~~~~~~vf-lGD~vDrG~~s-----------~evl~~l~~l 67 (268)
|+.++|+||.+ ..+..++++..-...+.+++ .||+++..+.+ ..++..+..+
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~~ 82 (277)
T cd07410 3 ILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNAL 82 (277)
T ss_pred EEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHhc
Confidence 37899999986 34566666554333344444 89999876522 2244444443
Q ss_pred hhhCCCeEEEecCCcccc
Q 024423 68 KIKYPENFFLLRGNHECA 85 (268)
Q Consensus 68 k~~~p~~v~~lrGNHE~~ 85 (268)
. . . ++..||||.-
T Consensus 83 g---~-d-~~~lGNHe~d 95 (277)
T cd07410 83 G---Y-D-AGTLGNHEFN 95 (277)
T ss_pred C---C-C-EEeecccCcc
Confidence 2 2 2 5566999963
No 92
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.22 E-value=0.012 Score=49.84 Aligned_cols=65 Identities=17% Similarity=0.200 Sum_probs=40.1
Q ss_pred cCCCCHHHHHHHHHhcCC-CCCceEEEeCCccCCCCCcHHH-HHHHHHhhhhC---------------------CCeEEE
Q 024423 21 DVHGQYSDLLRLFEYGGY-PPKANYLFLGDYVDRGKQSLET-ICLLLAYKIKY---------------------PENFFL 77 (268)
Q Consensus 21 DiHG~~~~l~~~l~~~~~-~~~~~~vflGD~vDrG~~s~ev-l~~l~~lk~~~---------------------p~~v~~ 77 (268)
|++|+=.-|.+.++.+.. -..+.++||||++|.|--+-+- -......+..+ ...++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 667776677777765433 3467788999999987533221 12222222111 245789
Q ss_pred ecCCcccc
Q 024423 78 LRGNHECA 85 (268)
Q Consensus 78 lrGNHE~~ 85 (268)
|+||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999984
No 93
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=96.14 E-value=0.0003 Score=66.11 Aligned_cols=211 Identities=14% Similarity=0.024 Sum_probs=128.6
Q ss_pred EEEecCCCCHHHHHHHHHhcCCCCC-ceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchh
Q 024423 17 VFAGDVHGQYSDLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD 95 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~ 95 (268)
+.++|.||.+.|+.+.++.- |.. .-|++-|++++++....+.+..+...+...|....+.|++||.-.+-..++|..
T Consensus 49 lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ 126 (476)
T KOG0376|consen 49 LKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEK 126 (476)
T ss_pred eeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhh
Confidence 78999999999999888753 333 348999999999999999999999999999999999999999988887777776
Q ss_pred HHHHHhh---HHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCC--------------------CcHHhhhcCCCCCCC
Q 024423 96 ECKRRFN---VRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDL--------------------SHLDQIRNLPRPTAV 152 (268)
Q Consensus 96 e~~~~~~---~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~--------------------~~~~~i~~i~r~~~~ 152 (268)
+....++ ..+...+...... |+.....+.++ -+.-+.-.+ .-+++..++.+.+..
T Consensus 127 ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~l-e~~kvt~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~ 204 (476)
T KOG0376|consen 127 AILTPEGDKKSVVEMKIDEEDMD-LIESDYSGPVL-EDHKVTLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPS 204 (476)
T ss_pred cccCCccCCcccccccccccccc-ccccccCCccc-ccchhhHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCc
Confidence 6655542 1122212211111 13323232222 111110000 001111111110000
Q ss_pred -CCchhHhHhhhcCCCCCCCCccccCCCceeeeChhhHHHHHHhCCCceEEeeeeee------------ccCeEEecC--
Q 024423 153 -PDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV------------EDGYEFFAD-- 217 (268)
Q Consensus 153 -~~~~~~~~llWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~------------~~G~~~~~~-- 217 (268)
.+.....+..|+.+......+.+..++.+...++.....|+...+++-+.+.+.-+ ..+|...++
T Consensus 205 ~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~E 284 (476)
T KOG0376|consen 205 LVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHE 284 (476)
T ss_pred ceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCcc
Confidence 01113456677777765555555566666667777788888888888877777532 122322222
Q ss_pred -ceEEEEecCCCCCC
Q 024423 218 -RQLVTIFSAPNYCG 231 (268)
Q Consensus 218 -~~~itifSa~~y~~ 231 (268)
+.++++|+.+.++.
T Consensus 285 s~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 285 SDNMNKIYGFEGEVK 299 (476)
T ss_pred chHHHHHhCCCcchh
Confidence 24788899888773
No 94
>PLN02533 probable purple acid phosphatase
Probab=96.12 E-value=0.009 Score=56.68 Aligned_cols=68 Identities=18% Similarity=0.148 Sum_probs=38.8
Q ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcH--HH-HHHHHHhhhhCCCeEEEecCCccccc
Q 024423 16 FVFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSL--ET-ICLLLAYKIKYPENFFLLRGNHECAS 86 (268)
Q Consensus 16 i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~--ev-l~~l~~lk~~~p~~v~~lrGNHE~~~ 86 (268)
++++||+|- .......++.+.....+-++++||+++-+...- +. ..++..+... -.++.++||||...
T Consensus 142 f~v~GDlG~-~~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~--~P~m~~~GNHE~~~ 212 (427)
T PLN02533 142 FAVSGDLGT-SEWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQ--RPWMVTHGNHELEK 212 (427)
T ss_pred EEEEEeCCC-CcccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhc--CceEEeCccccccc
Confidence 389999963 222223444443345677889999997543211 11 1122222212 34789999999864
No 95
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.87 E-value=0.022 Score=50.36 Aligned_cols=69 Identities=23% Similarity=0.293 Sum_probs=39.1
Q ss_pred EEEEecCCCC--H--HHHHHHH-HhcCCCCCceEEEeCCcc-CCCCCcH------HHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 16 FVFAGDVHGQ--Y--SDLLRLF-EYGGYPPKANYLFLGDYV-DRGKQSL------ETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 16 i~viGDiHG~--~--~~l~~~l-~~~~~~~~~~~vflGD~v-DrG~~s~------evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
++++||.=.. . .++.+.+ +.+.....+-+|++||++ +-|..+. +.+..++.. ......++.++||||
T Consensus 3 f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNHD 81 (277)
T cd07378 3 FLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNHD 81 (277)
T ss_pred EEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCcc
Confidence 3899998653 1 2333333 333334557789999997 5553221 222223221 113356999999999
Q ss_pred cc
Q 024423 84 CA 85 (268)
Q Consensus 84 ~~ 85 (268)
..
T Consensus 82 ~~ 83 (277)
T cd07378 82 YS 83 (277)
T ss_pred cC
Confidence 86
No 96
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.70 E-value=0.021 Score=50.24 Aligned_cols=65 Identities=20% Similarity=0.170 Sum_probs=40.2
Q ss_pred EEEEecCCCCH----------HHHHHHHHhcCCCCCceEEEeCCccCCCCCc-----HHHHHHHHHhhhhCCCeEEEecC
Q 024423 16 FVFAGDVHGQY----------SDLLRLFEYGGYPPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRG 80 (268)
Q Consensus 16 i~viGDiHG~~----------~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrG 80 (268)
|+.++|+||++ ..+..++++....++..++..||+++..+.+ ..++..+-.+ +..+ ...|
T Consensus 3 il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~G 77 (257)
T cd07408 3 ILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTPG 77 (257)
T ss_pred EEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Eccc
Confidence 37889999974 4566666655433455566799999876543 2333333332 2344 4569
Q ss_pred Ccccc
Q 024423 81 NHECA 85 (268)
Q Consensus 81 NHE~~ 85 (268)
|||.-
T Consensus 78 NHefd 82 (257)
T cd07408 78 NHEFD 82 (257)
T ss_pred ccccc
Confidence 99963
No 97
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=95.64 E-value=0.81 Score=40.49 Aligned_cols=48 Identities=17% Similarity=0.267 Sum_probs=30.7
Q ss_pred CceEEeeeeeeccCeEEecC--ceEEEEecCCCCCCCCCCcEEEEEEcC-CceEEE
Q 024423 198 LDLVCRAHQVVEDGYEFFAD--RQLVTIFSAPNYCGEFDNAGAMMSIDE-ELVCSF 250 (268)
Q Consensus 198 ~~~iIrgH~~~~~G~~~~~~--~~~itifSa~~y~~~~~n~ga~l~i~~-~~~~~~ 250 (268)
-..++.||++. -|.+...+ ++-+.+.|.|.|.. .|.++.+|= ++++..
T Consensus 204 PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~ 254 (257)
T cd07387 204 PHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEP 254 (257)
T ss_pred CCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEE
Confidence 67789999996 45554432 56677888898853 555555543 445443
No 98
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.91 E-value=0.062 Score=48.20 Aligned_cols=65 Identities=25% Similarity=0.274 Sum_probs=41.0
Q ss_pred EEEEecCCCCHH--------------HHHHHHHhcCCC-CCceEEEeCCccCCCCC-c-----HHHHHHHHHhhhhCCCe
Q 024423 16 FVFAGDVHGQYS--------------DLLRLFEYGGYP-PKANYLFLGDYVDRGKQ-S-----LETICLLLAYKIKYPEN 74 (268)
Q Consensus 16 i~viGDiHG~~~--------------~l~~~l~~~~~~-~~~~~vflGD~vDrG~~-s-----~evl~~l~~lk~~~p~~ 74 (268)
|+.++|+||++. .+..+++..... ++..++..||++...+. + ..++..+.++. ..
T Consensus 3 il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g----~D 78 (288)
T cd07412 3 ILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG----VD 78 (288)
T ss_pred EEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC----Ce
Confidence 378999998854 366666655433 33456679999987654 2 23455554443 23
Q ss_pred EEEecCCcccc
Q 024423 75 FFLLRGNHECA 85 (268)
Q Consensus 75 v~~lrGNHE~~ 85 (268)
.+..||||.-
T Consensus 79 -a~t~GNHefd 88 (288)
T cd07412 79 -ASAVGNHEFD 88 (288)
T ss_pred -eeeecccccc
Confidence 3566999963
No 99
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.62 E-value=0.072 Score=47.06 Aligned_cols=64 Identities=20% Similarity=0.223 Sum_probs=36.6
Q ss_pred EEEEecCCCCH----------------------HHHHHHHHhcCCC-CCceE-EEeCCccCCCCCcH-----HHHHHHHH
Q 024423 16 FVFAGDVHGQY----------------------SDLLRLFEYGGYP-PKANY-LFLGDYVDRGKQSL-----ETICLLLA 66 (268)
Q Consensus 16 i~viGDiHG~~----------------------~~l~~~l~~~~~~-~~~~~-vflGD~vDrG~~s~-----evl~~l~~ 66 (268)
++.++|+||++ ..+..++++.... ..+.+ +..||+++..+.+. .++..+.+
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 36778888874 3445556554333 33444 56999998765432 33344433
Q ss_pred hhhhCCCeEEEecCCcccc
Q 024423 67 YKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 67 lk~~~p~~v~~lrGNHE~~ 85 (268)
.+..+.. ||||.-
T Consensus 83 ----~g~da~~--GNHefd 95 (264)
T cd07411 83 ----LGVDAMV--GHWEFT 95 (264)
T ss_pred ----hCCeEEe--cccccc
Confidence 2333333 999964
No 100
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=94.32 E-value=0.14 Score=46.72 Aligned_cols=50 Identities=18% Similarity=0.133 Sum_probs=33.6
Q ss_pred CCCCceEEEeCCccCCCC--CcHHHHHHHHHhhhhCCCeEEEecCCccccch
Q 024423 38 YPPKANYLFLGDYVDRGK--QSLETICLLLAYKIKYPENFFLLRGNHECASI 87 (268)
Q Consensus 38 ~~~~~~~vflGD~vDrG~--~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 87 (268)
....|.+||+||.|+.-. +....+....+-.+.+.-...++.||||+...
T Consensus 98 sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 98 SEKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred ccCCCEEEEeCCcccccccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 456788999999999611 23344444444444555667899999998653
No 101
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.70 E-value=0.1 Score=55.62 Aligned_cols=64 Identities=19% Similarity=0.168 Sum_probs=40.5
Q ss_pred EEEEecCCCCH---HHHHHHHHhcCCCCCceEEE-eCCccCCCCCc-----HHHHHHHHHhhhhCCCeEEEecCCccc
Q 024423 16 FVFAGDVHGQY---SDLLRLFEYGGYPPKANYLF-LGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 84 (268)
Q Consensus 16 i~viGDiHG~~---~~l~~~l~~~~~~~~~~~vf-lGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 84 (268)
|+.++|+||.+ ..+..++++......+.+++ .||++++.+.+ ..++..+.++. --....||||.
T Consensus 663 Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 663 ILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 48999999874 55555565543333344444 89999987644 24455554432 23569999996
No 102
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=93.68 E-value=0.15 Score=44.96 Aligned_cols=63 Identities=24% Similarity=0.150 Sum_probs=40.6
Q ss_pred EEEecCC----------CCHHHHHHHHHhcCCCCCc-eEEEeCCccCCCCCc-----HHHHHHHHHhhhhCCCeEEEecC
Q 024423 17 VFAGDVH----------GQYSDLLRLFEYGGYPPKA-NYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRG 80 (268)
Q Consensus 17 ~viGDiH----------G~~~~l~~~l~~~~~~~~~-~~vflGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrG 80 (268)
+-+.|+| |.+..+..++++..-...+ .++..||+++.++.+ ..++..+..+. --+...|
T Consensus 4 l~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~G 78 (257)
T cd07406 4 LHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFG 78 (257)
T ss_pred EEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeec
Confidence 5567777 3467777787765543334 566799999876532 34555554443 2356789
Q ss_pred Cccc
Q 024423 81 NHEC 84 (268)
Q Consensus 81 NHE~ 84 (268)
|||.
T Consensus 79 NHef 82 (257)
T cd07406 79 NHEF 82 (257)
T ss_pred cccc
Confidence 9996
No 103
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=93.58 E-value=0.18 Score=45.08 Aligned_cols=65 Identities=17% Similarity=0.180 Sum_probs=37.6
Q ss_pred EEEEecCCCCH---------------------HHHHHHHHhcCCC-CCceEEEeCCccCCCCCc-----HHHHHHHHHhh
Q 024423 16 FVFAGDVHGQY---------------------SDLLRLFEYGGYP-PKANYLFLGDYVDRGKQS-----LETICLLLAYK 68 (268)
Q Consensus 16 i~viGDiHG~~---------------------~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s-----~evl~~l~~lk 68 (268)
|+.++|+||++ ..+..+++..... ++..++-.||+++..+.+ ..++..+-.+.
T Consensus 3 il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~g 82 (281)
T cd07409 3 ILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLLG 82 (281)
T ss_pred EEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhcC
Confidence 37889999864 4455566654332 233344599999876532 23334333332
Q ss_pred hhCCCeEEEecCCcccc
Q 024423 69 IKYPENFFLLRGNHECA 85 (268)
Q Consensus 69 ~~~p~~v~~lrGNHE~~ 85 (268)
..+ +..||||.-
T Consensus 83 ----~D~-~~lGNHefd 94 (281)
T cd07409 83 ----YDA-MTLGNHEFD 94 (281)
T ss_pred ----CCE-EEecccccc
Confidence 234 445999964
No 104
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=93.51 E-value=0.15 Score=45.53 Aligned_cols=70 Identities=23% Similarity=0.258 Sum_probs=41.2
Q ss_pred EecCCCC--HHHHHHHHHhcCC--CCCceEEEeCCccCCCCCcH--H------HHHHHHHhhhhCC-CeEEEecCCcccc
Q 024423 19 AGDVHGQ--YSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSL--E------TICLLLAYKIKYP-ENFFLLRGNHECA 85 (268)
Q Consensus 19 iGDiHG~--~~~l~~~l~~~~~--~~~~~~vflGD~vDrG~~s~--e------vl~~l~~lk~~~p-~~v~~lrGNHE~~ 85 (268)
.|+-.-+ ...+...++.+.- ++.+-+|+.||+++.+.... + .-.+...++..+| -.|+.+.||||..
T Consensus 43 ~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~ 122 (296)
T cd00842 43 WGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSY 122 (296)
T ss_pred CcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCC
Confidence 4666522 3455556654433 35677889999998876421 1 1112222333333 4699999999986
Q ss_pred chh
Q 024423 86 SIN 88 (268)
Q Consensus 86 ~~~ 88 (268)
..+
T Consensus 123 p~~ 125 (296)
T cd00842 123 PVN 125 (296)
T ss_pred ccc
Confidence 543
No 105
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.78 E-value=0.19 Score=47.10 Aligned_cols=45 Identities=24% Similarity=0.344 Sum_probs=30.0
Q ss_pred CCceEEEeCCccCCCCCc--HHHHHHHHHhhhhCC----CeEEEecCCccc
Q 024423 40 PKANYLFLGDYVDRGKQS--LETICLLLAYKIKYP----ENFFLLRGNHEC 84 (268)
Q Consensus 40 ~~~~~vflGD~vDrG~~s--~evl~~l~~lk~~~p----~~v~~lrGNHE~ 84 (268)
..+.++||||++|-|... -|--.....++..++ .+++.+.||||-
T Consensus 93 kPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 93 KPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 456678899999988743 222333333443343 469999999996
No 106
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=92.19 E-value=0.3 Score=41.33 Aligned_cols=72 Identities=18% Similarity=0.203 Sum_probs=40.8
Q ss_pred EEEEecCCCC-----HHHHHHHHHhcC-CCCCceEEEeCCccCCCCCcH------------H-HHHHHHHhh--hhCCCe
Q 024423 16 FVFAGDVHGQ-----YSDLLRLFEYGG-YPPKANYLFLGDYVDRGKQSL------------E-TICLLLAYK--IKYPEN 74 (268)
Q Consensus 16 i~viGDiHG~-----~~~l~~~l~~~~-~~~~~~~vflGD~vDrG~~s~------------e-vl~~l~~lk--~~~p~~ 74 (268)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... + .+..+.+.. +....+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4788888844 677788888776 556678999999999622111 1 111111111 113368
Q ss_pred EEEecCCccccch
Q 024423 75 FFLLRGNHECASI 87 (268)
Q Consensus 75 v~~lrGNHE~~~~ 87 (268)
|++++|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998665
No 107
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=91.80 E-value=0.42 Score=43.95 Aligned_cols=70 Identities=26% Similarity=0.395 Sum_probs=46.0
Q ss_pred EEEecCCCCHHHHH---HHHHhcCCCCCceEEEeCCccC-CCC---CcHHH-------HHHH--HHhhhhCCCeEEEecC
Q 024423 17 VFAGDVHGQYSDLL---RLFEYGGYPPKANYLFLGDYVD-RGK---QSLET-------ICLL--LAYKIKYPENFFLLRG 80 (268)
Q Consensus 17 ~viGDiHG~~~~l~---~~l~~~~~~~~~~~vflGD~vD-rG~---~s~ev-------l~~l--~~lk~~~p~~v~~lrG 80 (268)
.|-|=.||.++.+- ...++.|-.+-|.++++||+=- |.. +++.| =.+. ..=....|---++|-|
T Consensus 4 aVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFIGG 83 (456)
T KOG2863|consen 4 AVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIGG 83 (456)
T ss_pred eeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEecC
Confidence 78899999999988 4456666677888999999852 211 22222 1111 1112346666789999
Q ss_pred Cccccc
Q 024423 81 NHECAS 86 (268)
Q Consensus 81 NHE~~~ 86 (268)
|||.+.
T Consensus 84 NHEAsn 89 (456)
T KOG2863|consen 84 NHEASN 89 (456)
T ss_pred chHHHH
Confidence 999874
No 108
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=91.14 E-value=0.81 Score=43.42 Aligned_cols=33 Identities=9% Similarity=0.114 Sum_probs=26.3
Q ss_pred hHHHHHHhCCCceEEeeeeeeccCeEEecCceE
Q 024423 188 KVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQL 220 (268)
Q Consensus 188 ~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~ 220 (268)
.++..+-++++++++-||...=+......|.++
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 589999999999999999987666555555544
No 109
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=90.26 E-value=0.47 Score=42.47 Aligned_cols=65 Identities=18% Similarity=0.070 Sum_probs=35.9
Q ss_pred EEEEecCCCCHHH----------HHHHHHhcCC-----CCCceEEEeCCccCCCCCc-----HHHHHHHHHhhhhCCCeE
Q 024423 16 FVFAGDVHGQYSD----------LLRLFEYGGY-----PPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENF 75 (268)
Q Consensus 16 i~viGDiHG~~~~----------l~~~l~~~~~-----~~~~~~vflGD~vDrG~~s-----~evl~~l~~lk~~~p~~v 75 (268)
|+.++|+||++.. +..++++... .++..++-.||.+...+.+ ..++.++-++. ..+
T Consensus 3 Il~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~Da 78 (285)
T cd07405 3 ILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YDA 78 (285)
T ss_pred EEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----CcE
Confidence 4788999998533 4445544322 2334455599998533322 23334444433 234
Q ss_pred EEecCCcccc
Q 024423 76 FLLRGNHECA 85 (268)
Q Consensus 76 ~~lrGNHE~~ 85 (268)
...||||.-
T Consensus 79 -~~~GNHEfD 87 (285)
T cd07405 79 -MAVGNHEFD 87 (285)
T ss_pred -Eeecccccc
Confidence 445999964
No 110
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=89.84 E-value=0.51 Score=42.27 Aligned_cols=65 Identities=23% Similarity=0.173 Sum_probs=37.0
Q ss_pred EEEEecCCCCHH-------------HHHHHHHhc----CC-CCCceEEEeCCccCCCCCc-------HHHHHHHHHhhhh
Q 024423 16 FVFAGDVHGQYS-------------DLLRLFEYG----GY-PPKANYLFLGDYVDRGKQS-------LETICLLLAYKIK 70 (268)
Q Consensus 16 i~viGDiHG~~~-------------~l~~~l~~~----~~-~~~~~~vflGD~vDrG~~s-------~evl~~l~~lk~~ 70 (268)
|+-+.|+||.+. .+.++.+.. .. .++..++..||.+..-+.+ ..++.++-++.
T Consensus 8 ILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg-- 85 (282)
T cd07407 8 FLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP-- 85 (282)
T ss_pred EEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC--
Confidence 488999999753 122332221 11 2233455699999865432 22344444442
Q ss_pred CCCeEEEecCCcccc
Q 024423 71 YPENFFLLRGNHECA 85 (268)
Q Consensus 71 ~p~~v~~lrGNHE~~ 85 (268)
-=.+..||||.-
T Consensus 86 ---yDa~tlGNHEFd 97 (282)
T cd07407 86 ---YDLLTIGNHELY 97 (282)
T ss_pred ---CcEEeecccccC
Confidence 336889999984
No 111
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=89.83 E-value=0.48 Score=46.01 Aligned_cols=66 Identities=23% Similarity=0.232 Sum_probs=40.8
Q ss_pred EEEEecCCCCHH---------------HHHHHHHhcCCCC-CceEEEeCCccCCCC------CcHHHHHHHHHhhhhCCC
Q 024423 16 FVFAGDVHGQYS---------------DLLRLFEYGGYPP-KANYLFLGDYVDRGK------QSLETICLLLAYKIKYPE 73 (268)
Q Consensus 16 i~viGDiHG~~~---------------~l~~~l~~~~~~~-~~~~vflGD~vDrG~------~s~evl~~l~~lk~~~p~ 73 (268)
|+-+.|+||.+. ....++++..-.. +..+|=.||++++.+ .....+.++-.++
T Consensus 29 ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~----- 103 (517)
T COG0737 29 ILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG----- 103 (517)
T ss_pred EEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC-----
Confidence 388999999998 3333333332222 233444999999833 2334566666654
Q ss_pred eEEEecCCccccc
Q 024423 74 NFFLLRGNHECAS 86 (268)
Q Consensus 74 ~v~~lrGNHE~~~ 86 (268)
-=....||||.-.
T Consensus 104 yDa~tiGNHEFd~ 116 (517)
T COG0737 104 YDAMTLGNHEFDY 116 (517)
T ss_pred CcEEeeccccccc
Confidence 2267889999853
No 112
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=89.66 E-value=0.67 Score=42.16 Aligned_cols=64 Identities=20% Similarity=0.107 Sum_probs=39.6
Q ss_pred EEEEecCCCCH------HHHHHHHHhcCC-----CCCceEEEeCCccCCCCC-------------cHHHHHHHHHhhhhC
Q 024423 16 FVFAGDVHGQY------SDLLRLFEYGGY-----PPKANYLFLGDYVDRGKQ-------------SLETICLLLAYKIKY 71 (268)
Q Consensus 16 i~viGDiHG~~------~~l~~~l~~~~~-----~~~~~~vflGD~vDrG~~-------------s~evl~~l~~lk~~~ 71 (268)
|+-+.|+||++ ..+..+++.... .++..++..||.+..++. ...++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g--- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG--- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC---
Confidence 37789999995 344444544321 234456679999875543 334455555554
Q ss_pred CCeEEEecCCccc
Q 024423 72 PENFFLLRGNHEC 84 (268)
Q Consensus 72 p~~v~~lrGNHE~ 84 (268)
-=.+..||||.
T Consensus 80 --~Da~tlGNHEF 90 (313)
T cd08162 80 --VQAIALGNHEF 90 (313)
T ss_pred --CcEEecccccc
Confidence 23678999995
No 113
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=89.58 E-value=4 Score=34.28 Aligned_cols=85 Identities=15% Similarity=0.231 Sum_probs=65.1
Q ss_pred ceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccch----------------hHHHHHhhHHH
Q 024423 42 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY----------------DECKRRFNVRL 105 (268)
Q Consensus 42 ~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~----------------~e~~~~~~~~~ 105 (268)
..+||+|- |-+.-|++.++-+++.+|.++- .+.|+-|.|..++...|. .|..+.|...+
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~-yI~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRS-YIAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceE-EEEecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 45889995 8899999999999998888764 459999999988655542 23344455677
Q ss_pred HHHhchhhhcCCeEEEEcCeEEEecC
Q 024423 106 WKAFTDCFNCLPVAALIDEKILCMHG 131 (268)
Q Consensus 106 ~~~~~~~~~~lP~~~~i~~~~l~vHg 131 (268)
|..+...+.++++...+..+++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 77788888888888777777777777
No 114
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=88.30 E-value=2.2 Score=35.76 Aligned_cols=77 Identities=18% Similarity=0.276 Sum_probs=44.6
Q ss_pred CCCCceEEEeCCccC--CCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchhHHHHHhhHHHHHHhchhhhc
Q 024423 38 YPPKANYLFLGDYVD--RGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNC 115 (268)
Q Consensus 38 ~~~~~~~vflGD~vD--rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~ 115 (268)
..++|.++.-||+-= |=+...+=+.++- ..|+.-+++|||||.+.-.. ..+...+.. ..-.+++.|+.
T Consensus 41 v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~----~LPG~K~m~rGNHDYWw~s~-----skl~n~lp~-~l~~~n~~f~l 110 (230)
T COG1768 41 VSPEDIVLLPGDISWAMRLEEAEEDLRFIG----DLPGTKYMIRGNHDYWWSSI-----SKLNNALPP-ILFYLNNGFEL 110 (230)
T ss_pred CChhhEEEecccchhheechhhhhhhhhhh----cCCCcEEEEecCCccccchH-----HHHHhhcCc-hHhhhccceeE
Confidence 356677778999742 2233334444443 35788899999999986421 122222222 24456777777
Q ss_pred CCeEEEEcCe
Q 024423 116 LPVAALIDEK 125 (268)
Q Consensus 116 lP~~~~i~~~ 125 (268)
+-++ +++-+
T Consensus 111 ~n~a-I~G~R 119 (230)
T COG1768 111 LNYA-IVGVR 119 (230)
T ss_pred eeEE-EEEee
Confidence 7754 55633
No 115
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.69 E-value=1.6 Score=41.49 Aligned_cols=69 Identities=19% Similarity=0.319 Sum_probs=52.1
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHhcCC--CCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCc
Q 024423 12 TKPLFVFAGDVHGQYSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 82 (268)
Q Consensus 12 ~~p~i~viGDiHG~~~~l~~~l~~~~~--~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 82 (268)
+.++ .|+||.-|+++.|.+-.++..- .|-+.++++|++.+--.++-|++.+.... ...|-.++++-+|-
T Consensus 5 ~~kI-Lv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKI-LVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceE-EEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 3566 9999999999998776665433 34577889999999766778887776553 36777788887765
No 116
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=87.05 E-value=0.91 Score=48.58 Aligned_cols=64 Identities=20% Similarity=0.174 Sum_probs=38.0
Q ss_pred EEEEecCCCCHH----------------HHHHHHHhcCCCCCceEE-EeCCccCCCCC--------------cHHHHHHH
Q 024423 16 FVFAGDVHGQYS----------------DLLRLFEYGGYPPKANYL-FLGDYVDRGKQ--------------SLETICLL 64 (268)
Q Consensus 16 i~viGDiHG~~~----------------~l~~~l~~~~~~~~~~~v-flGD~vDrG~~--------------s~evl~~l 64 (268)
|+.++|+||++. .+..++++........++ -.||.+...+- ...++..+
T Consensus 44 il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~~m 123 (1163)
T PRK09419 44 ILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIKAM 123 (1163)
T ss_pred EEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHHHH
Confidence 388999999863 344455544322233444 49999986652 12344444
Q ss_pred HHhhhhCCCeEEEecCCccc
Q 024423 65 LAYKIKYPENFFLLRGNHEC 84 (268)
Q Consensus 65 ~~lk~~~p~~v~~lrGNHE~ 84 (268)
-++. -=....||||.
T Consensus 124 N~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 124 NALG-----YDAGTLGNHEF 138 (1163)
T ss_pred hhcC-----ccEEeeccccc
Confidence 4442 23567999996
No 117
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=87.03 E-value=0.97 Score=45.09 Aligned_cols=64 Identities=17% Similarity=0.067 Sum_probs=38.9
Q ss_pred EEEecCCCCHH----------------HHHHHHHhcCCC-CCceEEEeCCccCCCCCc-------------HHHHHHHHH
Q 024423 17 VFAGDVHGQYS----------------DLLRLFEYGGYP-PKANYLFLGDYVDRGKQS-------------LETICLLLA 66 (268)
Q Consensus 17 ~viGDiHG~~~----------------~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s-------------~evl~~l~~ 66 (268)
+-..|+||++. .+..++++..-. ++..++-.||.+...|.+ ..++..+-.
T Consensus 6 l~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~mN~ 85 (626)
T TIGR01390 6 VETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAMNL 85 (626)
T ss_pred EEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHHhh
Confidence 78899999964 334445443322 334456699999865533 224455544
Q ss_pred hhhhCCCeEEEecCCcccc
Q 024423 67 YKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 67 lk~~~p~~v~~lrGNHE~~ 85 (268)
|. -=....||||.-
T Consensus 86 lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 86 LK-----YDVGNLGNHEFN 99 (626)
T ss_pred cC-----ccEEeccccccc
Confidence 43 235789999953
No 118
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=87.02 E-value=0.46 Score=45.03 Aligned_cols=41 Identities=24% Similarity=0.383 Sum_probs=33.9
Q ss_pred ceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccch
Q 024423 42 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 87 (268)
Q Consensus 42 ~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 87 (268)
+.+-.+||+-||||++-.+++-|...- .+=+-.||||...+
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 457789999999999999998887652 67788999997554
No 119
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=86.70 E-value=1.1 Score=44.96 Aligned_cols=64 Identities=14% Similarity=0.051 Sum_probs=39.9
Q ss_pred EEEecCCCCHH----------------HHHHHHHhcCC-CCCceEEEeCCccCCCCCcH-------------HHHHHHHH
Q 024423 17 VFAGDVHGQYS----------------DLLRLFEYGGY-PPKANYLFLGDYVDRGKQSL-------------ETICLLLA 66 (268)
Q Consensus 17 ~viGDiHG~~~----------------~l~~~l~~~~~-~~~~~~vflGD~vDrG~~s~-------------evl~~l~~ 66 (268)
+-..|+||++. .+..++++..- .++..+|-.||.+...|.+- .++..+-.
T Consensus 29 L~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~amN~ 108 (649)
T PRK09420 29 METTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKAMNT 108 (649)
T ss_pred EEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHHHHh
Confidence 78999999864 33444444322 23445666999998665431 24555555
Q ss_pred hhhhCCCeEEEecCCcccc
Q 024423 67 YKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 67 lk~~~p~~v~~lrGNHE~~ 85 (268)
|. -=....||||.-
T Consensus 109 lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 109 LD-----YDVGNLGNHEFN 122 (649)
T ss_pred cC-----CcEEeccchhhh
Confidence 53 336789999953
No 120
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=86.08 E-value=2 Score=38.21 Aligned_cols=65 Identities=22% Similarity=0.237 Sum_probs=45.3
Q ss_pred EEEEecCCCC--HHHHHHHHHhcCCCC-CceEEEeCCccCCC-CCcHHHHHHHHHhhhhCCCeEEEecCCcccc
Q 024423 16 FVFAGDVHGQ--YSDLLRLFEYGGYPP-KANYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 16 i~viGDiHG~--~~~l~~~l~~~~~~~-~~~~vflGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 85 (268)
|+++|||=|. ...+...|..+.... .+-+|..||....| .-+-++...|..+ +-.++.+ |||+.-
T Consensus 3 ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~D 71 (266)
T TIGR00282 3 FLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWF 71 (266)
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhcc
Confidence 3899999999 566777776655433 35556689999766 3466777777654 4466666 999874
No 121
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=85.20 E-value=1.4 Score=45.20 Aligned_cols=64 Identities=20% Similarity=0.101 Sum_probs=39.0
Q ss_pred EEEecCCCCHHH----------------HHHHHHhcCC-CCCceEEEeCCccCCCCCc--------------HHHHHHHH
Q 024423 17 VFAGDVHGQYSD----------------LLRLFEYGGY-PPKANYLFLGDYVDRGKQS--------------LETICLLL 65 (268)
Q Consensus 17 ~viGDiHG~~~~----------------l~~~l~~~~~-~~~~~~vflGD~vDrG~~s--------------~evl~~l~ 65 (268)
+-..|+||++.. +..++++..- .++..+|-.||++-..|.+ ..++..+-
T Consensus 119 L~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~amN 198 (814)
T PRK11907 119 LSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYAALE 198 (814)
T ss_pred EEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHHHHh
Confidence 789999999643 2333443322 2344566699999765432 12556555
Q ss_pred HhhhhCCCeEEEecCCcccc
Q 024423 66 AYKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 66 ~lk~~~p~~v~~lrGNHE~~ 85 (268)
.|. -=....||||.-
T Consensus 199 ~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 199 ALG-----FDAGTLGNHEFN 213 (814)
T ss_pred ccC-----CCEEEechhhcc
Confidence 554 236888999963
No 122
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=84.19 E-value=0.033 Score=51.59 Aligned_cols=192 Identities=13% Similarity=-0.091 Sum_probs=106.0
Q ss_pred ceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchhHHHHHh----hHHHHHHhchhhhcCC
Q 024423 42 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF----NVRLWKAFTDCFNCLP 117 (268)
Q Consensus 42 ~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~----~~~~~~~~~~~~~~lP 117 (268)
-..|+++++.+++.+.++.+.+-...+..+..+....++||+... .+++++.-.- ...+++..++-++..+
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~-----~~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSS-----FKRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcc-----hhhhheeecccccCceEEEEeccCcCccce
Confidence 458899999999999999999988888888888999999995433 2222211111 1134455667777888
Q ss_pred eEEEEcCeEEEecCCCCCCCCcHHhhhcCCCCC--CC--CCchhHhHhhhcCCCCCCCCccccCCCceeeeChh--hHHH
Q 024423 118 VAALIDEKILCMHGGLSPDLSHLDQIRNLPRPT--AV--PDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPD--KVSE 191 (268)
Q Consensus 118 ~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~--~~--~~~~~~~~llWsdp~~~~~~~~~~~rg~~~~fg~~--~~~~ 191 (268)
...+.+ ++++.|++..|.......+..+.-.. +. ...+ ...++=++-.. ...|... +....||-+ ..-+
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg-~f~llD~~~~~-k~tw~~~--~~~p~~gyDfwyqpr 198 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKG-GFLLLDSDFNE-KGTWEKP--GHSPLFGYDFWYQPR 198 (476)
T ss_pred eeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcC-CeEEecCccce-ecccccC--CCccccccceeeccc
Confidence 886655 99999999999765433333211000 00 0001 01111111000 0111111 111122211 1222
Q ss_pred HHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCCCCCCCcEEEEEEcCC
Q 024423 192 FLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEE 245 (268)
Q Consensus 192 fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~ 245 (268)
+....+.....+.|.-...+...+.++ .+.++.+-|.-...+.++.+.+..+
T Consensus 199 ~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 199 HNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred cceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 333344455555555443333333443 7777777777767778888888765
No 123
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=82.77 E-value=2.6 Score=41.34 Aligned_cols=64 Identities=22% Similarity=0.110 Sum_probs=37.5
Q ss_pred EEEecCCCCHHH---------------------HHHHHHhcCC-CCCceEEEeCCccCCCCCc-----HHHHHHHHHhhh
Q 024423 17 VFAGDVHGQYSD---------------------LLRLFEYGGY-PPKANYLFLGDYVDRGKQS-----LETICLLLAYKI 69 (268)
Q Consensus 17 ~viGDiHG~~~~---------------------l~~~l~~~~~-~~~~~~vflGD~vDrG~~s-----~evl~~l~~lk~ 69 (268)
+-+.|+||++.. +..++++..- .++..++..||.+...+.+ ...+.++-++.
T Consensus 4 LhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g- 82 (550)
T TIGR01530 4 IHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG- 82 (550)
T ss_pred EEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC-
Confidence 677888887543 3334443322 2345566799998765432 23344444443
Q ss_pred hCCCeEEEecCCcccc
Q 024423 70 KYPENFFLLRGNHECA 85 (268)
Q Consensus 70 ~~p~~v~~lrGNHE~~ 85 (268)
--....||||.-
T Consensus 83 ----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 ----FDFFTLGNHEFD 94 (550)
T ss_pred ----CCEEEecccccc
Confidence 346889999963
No 124
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=81.54 E-value=4.1 Score=35.99 Aligned_cols=65 Identities=17% Similarity=0.175 Sum_probs=41.8
Q ss_pred EEEEecCCCCHH--HHHHHHHhcCCC-CCceEEEeCCccCCC-CCcHHHHHHHHHhhhhCCCeEEEecCCcccc
Q 024423 16 FVFAGDVHGQYS--DLLRLFEYGGYP-PKANYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 16 i~viGDiHG~~~--~l~~~l~~~~~~-~~~~~vflGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 85 (268)
|.+||||=|.-. .+.+.|....-. +.+-+|-.||-.-.| .-+-++...|..+. -.+..+ ||||.-
T Consensus 2 ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~fD 70 (255)
T cd07382 2 ILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTWD 70 (255)
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-cccccC
Confidence 389999999854 445555544322 234455689998766 36677777776654 345555 999764
No 125
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=80.96 E-value=7.6 Score=34.93 Aligned_cols=71 Identities=14% Similarity=0.265 Sum_probs=45.7
Q ss_pred EEEEecCC----CCHHHHHHHHHhcC-CCC----CceEEEeCCccCCC----CCcH----HHHHHHHHh-hhhCC-----
Q 024423 16 FVFAGDVH----GQYSDLLRLFEYGG-YPP----KANYLFLGDYVDRG----KQSL----ETICLLLAY-KIKYP----- 72 (268)
Q Consensus 16 i~viGDiH----G~~~~l~~~l~~~~-~~~----~~~~vflGD~vDrG----~~s~----evl~~l~~l-k~~~p----- 72 (268)
++|+||+| -.++.|.++|+... ..+ ..-+|++|+++.+. ..+. +-.+-|..+ ..++|
T Consensus 30 ~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~~~ 109 (291)
T PTZ00235 30 WIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLILEH 109 (291)
T ss_pred EEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHHhc
Confidence 38889999 55788888888652 212 34689999998763 2222 223333321 22333
Q ss_pred CeEEEecCCccccc
Q 024423 73 ENFFLLRGNHECAS 86 (268)
Q Consensus 73 ~~v~~lrGNHE~~~ 86 (268)
.++++|+|-.|-+.
T Consensus 110 s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 110 CYLIFIPGINDPCA 123 (291)
T ss_pred CeEEEECCCCCCCc
Confidence 78999999999753
No 126
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=80.26 E-value=3.7 Score=38.61 Aligned_cols=69 Identities=12% Similarity=0.098 Sum_probs=37.9
Q ss_pred EEEecCC-CCHHHH--HHHHHh-cCCCCCceEEEeCCccCCCCCcHH------HHHHHHHhhh-hCCCeEEEecCCcccc
Q 024423 17 VFAGDVH-GQYSDL--LRLFEY-GGYPPKANYLFLGDYVDRGKQSLE------TICLLLAYKI-KYPENFFLLRGNHECA 85 (268)
Q Consensus 17 ~viGDiH-G~~~~l--~~~l~~-~~~~~~~~~vflGD~vDrG~~s~e------vl~~l~~lk~-~~p~~v~~lrGNHE~~ 85 (268)
+++||-= |..... .+.+.. +.-.+.+-+|-+||-++.|..++. ..+.++.-+. ...-.++++.||||.+
T Consensus 30 ~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNHDy~ 109 (394)
T PTZ00422 30 ASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQADWD 109 (394)
T ss_pred EEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCccccc
Confidence 8999953 322221 112222 122345567779998888876543 2333332111 0123689999999974
No 127
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=80.19 E-value=2.3 Score=41.72 Aligned_cols=65 Identities=18% Similarity=0.087 Sum_probs=36.2
Q ss_pred EEEEecCCCCHH----------HHHHHHHhcC-----CCCCceEEEeCCccCCCCCc-----HHHHHHHHHhhhhCCCeE
Q 024423 16 FVFAGDVHGQYS----------DLLRLFEYGG-----YPPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENF 75 (268)
Q Consensus 16 i~viGDiHG~~~----------~l~~~l~~~~-----~~~~~~~vflGD~vDrG~~s-----~evl~~l~~lk~~~p~~v 75 (268)
|+-+.|+||++. .+..+++... -.++..++..||.+...+.+ ..++.++-++. -.+
T Consensus 37 il~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~Da 112 (551)
T PRK09558 37 ILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----YDA 112 (551)
T ss_pred EEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----CCE
Confidence 388999999864 2233444322 12344566699998643322 22344444432 344
Q ss_pred EEecCCcccc
Q 024423 76 FLLRGNHECA 85 (268)
Q Consensus 76 ~~lrGNHE~~ 85 (268)
...||||.-
T Consensus 113 -~tlGNHEFD 121 (551)
T PRK09558 113 -MAVGNHEFD 121 (551)
T ss_pred -EcccccccC
Confidence 445999964
No 128
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=76.00 E-value=9.3 Score=37.23 Aligned_cols=52 Identities=21% Similarity=0.247 Sum_probs=39.0
Q ss_pred CeEEEEecCC------------CCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHH
Q 024423 14 PLFVFAGDVH------------GQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLA 66 (268)
Q Consensus 14 p~i~viGDiH------------G~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~ 66 (268)
++ .|-.|+| -.+..|..+|..+.-...+-++.=||++.-..-|.++|-..+.
T Consensus 15 rI-LVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~ 78 (646)
T KOG2310|consen 15 RI-LVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLE 78 (646)
T ss_pred EE-EEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHH
Confidence 45 8899999 3477889999877666667788899999877777666555444
No 129
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=74.24 E-value=5.4 Score=40.90 Aligned_cols=63 Identities=17% Similarity=0.106 Sum_probs=37.6
Q ss_pred EEEecCCCCHHH----------------HHHHHHhcCC-CCCceEEEeCCccCCCCCc-------------------HHH
Q 024423 17 VFAGDVHGQYSD----------------LLRLFEYGGY-PPKANYLFLGDYVDRGKQS-------------------LET 60 (268)
Q Consensus 17 ~viGDiHG~~~~----------------l~~~l~~~~~-~~~~~~vflGD~vDrG~~s-------------------~ev 60 (268)
+-..|+||++.. +..++++... .++..+|-.||++-..|.+ ..+
T Consensus 43 L~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~~~p~ 122 (780)
T PRK09418 43 LETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSYTHPL 122 (780)
T ss_pred EEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccccchHH
Confidence 889999998632 3334443322 2344566799988543321 235
Q ss_pred HHHHHHhhhhCCCeEEEecCCccc
Q 024423 61 ICLLLAYKIKYPENFFLLRGNHEC 84 (268)
Q Consensus 61 l~~l~~lk~~~p~~v~~lrGNHE~ 84 (268)
+.++-+|. -=....||||.
T Consensus 123 i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 123 YRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred HHHHhccC-----CCEEecccccc
Confidence 55555553 23678999995
No 130
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=73.86 E-value=5.6 Score=35.48 Aligned_cols=63 Identities=25% Similarity=0.255 Sum_probs=40.6
Q ss_pred EEEecCCCCHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCC-CeEEEecCCccccch
Q 024423 17 VFAGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLLRGNHECASI 87 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p-~~v~~lrGNHE~~~~ 87 (268)
+.|+|.|....+.. ..+..|-++-+||+..-|. +-||..+=-. ....| ..=+.|+||||.-.-
T Consensus 65 VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~-~gslph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 65 VCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEW-LGSLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred EEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHH-hccCcceeeEEEeeccceeec
Confidence 89999999766543 3566677788999987654 3344433221 11222 234789999998653
No 131
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=56.66 E-value=50 Score=23.58 Aligned_cols=66 Identities=14% Similarity=0.057 Sum_probs=43.7
Q ss_pred EEEecCCCCHHHHHHHHHhcCC--CCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCc
Q 024423 17 VFAGDVHGQYSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 82 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~~~~--~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 82 (268)
.||=|---+.+.+..+++.+.- +....++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 15 ~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 15 TVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred EEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 5778877788888888876532 34556778999999888877765666555555566666655554
No 132
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=52.22 E-value=12 Score=37.11 Aligned_cols=69 Identities=20% Similarity=0.277 Sum_probs=45.1
Q ss_pred ChhhHHHHHHhCCCc----eEEeeeeeec--cCeE-EecCceEEEE---ecCCCCCCCCCCcEEEEEEcCCceEEEEEEc
Q 024423 185 GPDKVSEFLKRHDLD----LVCRAHQVVE--DGYE-FFADRQLVTI---FSAPNYCGEFDNAGAMMSIDEELVCSFQILK 254 (268)
Q Consensus 185 g~~~~~~fl~~~~~~----~iIrgH~~~~--~G~~-~~~~~~~iti---fSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 254 (268)
.++..++.|+..|++ .||.||+|+. .|-. +-++||++.| ||.+ |...++ -|.+-.|.++-.......+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TG-IAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTG-IAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccC-ccceEEEecCCcceeccCC
Confidence 456677889999998 9999999987 5655 3578999999 5555 555433 3344444444334443333
Q ss_pred c
Q 024423 255 P 255 (268)
Q Consensus 255 ~ 255 (268)
|
T Consensus 585 p 585 (640)
T PF06874_consen 585 P 585 (640)
T ss_pred C
Confidence 3
No 133
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=48.39 E-value=13 Score=29.41 Aligned_cols=85 Identities=26% Similarity=0.430 Sum_probs=49.1
Q ss_pred cCCCCHHHHHHHHHhcCCCCCceE--EEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCccccchhhhccchhHHH
Q 024423 21 DVHGQYSDLLRLFEYGGYPPKANY--LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 98 (268)
Q Consensus 21 DiHG~~~~l~~~l~~~~~~~~~~~--vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~ 98 (268)
||.|++..|++.|..+++|..-.+ +-.|| +...+.++-..-..|+..|.-.. +...+..+....
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l-------~~~g~eL~~k~D 66 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLL-------VDRGYELYGKND 66 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHH-------HHcCchhhcCCh
Confidence 899999999999999999843221 22333 22222332222233443321111 112223344445
Q ss_pred HHhhHHHHHHhchhhhcCCeE
Q 024423 99 RRFNVRLWKAFTDCFNCLPVA 119 (268)
Q Consensus 99 ~~~~~~~~~~~~~~~~~lP~~ 119 (268)
.++.+.+|+.+.+.|.+-|..
T Consensus 67 ~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 67 LRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 667788899999999988875
No 134
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=47.27 E-value=1e+02 Score=25.08 Aligned_cols=102 Identities=16% Similarity=0.221 Sum_probs=62.2
Q ss_pred EEEecCCCCHHHHHHHHHh-cCC------------CCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecCCcc
Q 024423 17 VFAGDVHGQYSDLLRLFEY-GGY------------PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 83 (268)
Q Consensus 17 ~viGDiHG~~~~l~~~l~~-~~~------------~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 83 (268)
++.+-.+||-..+.+.+.. ++. ..+-++||+|=-+|+|.-+-++..+|-.|+ +.+|++. |-.
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF-~T~- 76 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF-GTA- 76 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE-Eec-
Confidence 5777889998888766542 222 133569999999999999999999988764 3455433 211
Q ss_pred ccchhhhccchhHHHHHhhHHHHHHhchhhhcCCeEEEEcCeEEEecCCCCCCC
Q 024423 84 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDL 137 (268)
Q Consensus 84 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~ 137 (268)
|+. ....|...+.+....++..= ..+- +.|+++|-++|..
T Consensus 77 --------G~~--~~s~~~~~~~~~~~~~~~~~---~~~l-g~f~CqGk~~~~~ 116 (160)
T PF12641_consen 77 --------GAG--PDSEYAKKILKNVEALLPKG---NEIL-GTFMCQGKMDPKV 116 (160)
T ss_pred --------CCC--CchHHHHHHHHHHHHhhccC---Ceec-ceEEeCCcCCHHH
Confidence 221 12333344444444444332 2223 4566789988843
No 135
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=41.47 E-value=84 Score=23.52 Aligned_cols=43 Identities=16% Similarity=0.519 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEe
Q 024423 27 SDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 78 (268)
Q Consensus 27 ~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~l 78 (268)
..+.++++ .-|+.++|++|| -|..-.|+..-+.. ++|++|.++
T Consensus 53 ~~i~~i~~---~fP~~kfiLIGD---sgq~DpeiY~~ia~---~~P~~i~ai 95 (100)
T PF09949_consen 53 DNIERILR---DFPERKFILIGD---SGQHDPEIYAEIAR---RFPGRILAI 95 (100)
T ss_pred HHHHHHHH---HCCCCcEEEEee---CCCcCHHHHHHHHH---HCCCCEEEE
Confidence 34444443 445667788887 35555666655433 577776543
No 136
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=40.76 E-value=1.3e+02 Score=28.48 Aligned_cols=66 Identities=11% Similarity=0.064 Sum_probs=45.9
Q ss_pred CCeEEEEecCCC-CHHHHHHHHHhcCCCCCceEEEeCCccCCCCCcHHHHHHHHHhhhhC-CCeEEEecC
Q 024423 13 KPLFVFAGDVHG-QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKY-PENFFLLRG 80 (268)
Q Consensus 13 ~p~i~viGDiHG-~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~-p~~v~~lrG 80 (268)
... +||=|-+. +-+.+.+.|+.+.-.+..+++.+||+.+.|+.+.+.-.-+..+.... .+.++++ |
T Consensus 325 ~g~-~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQ-LLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCe-EEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 455 78888554 57888888876554344678899999999999988876665544433 3455544 6
No 137
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=40.20 E-value=31 Score=30.19 Aligned_cols=85 Identities=31% Similarity=0.446 Sum_probs=44.0
Q ss_pred eEEEeCCcc-CC-----CCCcHHHHHHHHHhhh-------hCCCeEEEecCCccccchhhhccchhHHHH-Hh-hHHHHH
Q 024423 43 NYLFLGDYV-DR-----GKQSLETICLLLAYKI-------KYPENFFLLRGNHECASINRIYGFYDECKR-RF-NVRLWK 107 (268)
Q Consensus 43 ~~vflGD~v-Dr-----G~~s~evl~~l~~lk~-------~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~-~~-~~~~~~ 107 (268)
.-+||||-. || |+. =++.+|-++.- +-..+|++|-||||.-. +..| ...... +. ..+-|.
T Consensus 87 pciflgdhtgdrfsti~gd~--yiltllnsm~nme~nkdsrinknvvvlagnhein~-ngny--~arlanhkls~gDTYn 161 (318)
T PF13258_consen 87 PCIFLGDHTGDRFSTIFGDQ--YILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNY--MARLANHKLSAGDTYN 161 (318)
T ss_pred cceeecCcccchhhhhcchH--HHHHHHHHHHhcccccccccccceEEEecCceecc-CchH--HHHHhhCCCCccchhh
Confidence 367788755 34 222 23444444332 13468999999999753 2221 111111 00 112222
Q ss_pred HhchhhhcCCeEEEEcC-eEEEecCCCCCC
Q 024423 108 AFTDCFNCLPVAALIDE-KILCMHGGLSPD 136 (268)
Q Consensus 108 ~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~ 136 (268)
.+..+|++-.-.+ +++-.|-||-.+
T Consensus 162 ----lIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 162 ----LIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ----ccccccccccCcchhhhhcccCceec
Confidence 3566777744322 688888888654
No 138
>PF04263 TPK_catalytic: Thiamin pyrophosphokinase, catalytic domain; InterPro: IPR007371 Thiamin pyrophosphokinase (TPK, 2.7.6.2 from EC) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme thiamin pyrophosphate (TPP). Thus, TPK is important for the formation of a coenzyme required for central metabolic functions. The structure of thiamin pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis [].; GO: 0004788 thiamine diphosphokinase activity, 0005524 ATP binding, 0009229 thiamine diphosphate biosynthetic process; PDB: 2F17_B 1IG3_B 3S4Y_B 2OMK_B 1IG0_A 3MEL_B 3CQ9_A 3LM8_B 3K94_B 3L8M_B ....
Probab=32.51 E-value=1.8e+02 Score=22.49 Aligned_cols=63 Identities=24% Similarity=0.394 Sum_probs=38.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHhcCC----------------------CCCceEEEeCCccCCCCCcHHHHHHHHHhhhhC
Q 024423 14 PLFVFAGDVHGQYSDLLRLFEYGGY----------------------PPKANYLFLGDYVDRGKQSLETICLLLAYKIKY 71 (268)
Q Consensus 14 p~i~viGDiHG~~~~l~~~l~~~~~----------------------~~~~~~vflGD~vDrG~~s~evl~~l~~lk~~~ 71 (268)
|- ++|||...--....+.++..+. .+...++++|-.=.|=++.+..+.++..++ +.
T Consensus 37 Pd-~iiGDfDSi~~~~~~~~~~~~~~~~~~p~kD~TD~e~Al~~~~~~~~~~i~v~Ga~GgR~DH~lanl~~l~~~~-~~ 114 (123)
T PF04263_consen 37 PD-LIIGDFDSISPEVLEFYKSKGVEIIHFPEKDYTDLEKALEYAIEQGPDEIIVLGALGGRFDHTLANLNLLYKYK-KR 114 (123)
T ss_dssp -S-EEEC-SSSS-HHHHHHHHHCTTEEEEE-STTS-HHHHHHHHHHHTTTSEEEEES-SSSSHHHHHHHHHHHHHHH-TT
T ss_pred CC-EEEecCCCCChHHHHHHHhhccceecccccccCHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHHHHHHHHH-Hc
Confidence 55 7899999888877777765433 123467777777777777777777776655 33
Q ss_pred CCeEEEe
Q 024423 72 PENFFLL 78 (268)
Q Consensus 72 p~~v~~l 78 (268)
.-+++++
T Consensus 115 ~~~i~li 121 (123)
T PF04263_consen 115 GIKIVLI 121 (123)
T ss_dssp TSEEEEE
T ss_pred CCeEEEE
Confidence 3344443
No 139
>PF08497 Radical_SAM_N: Radical SAM N-terminal; InterPro: IPR013704 This domain tends to occur to the N terminus of PF04055 from PFAM radical SAM domain in hypothetical bacterial proteins. Proteins in this entry are radical SAM proteins, they catalyse diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. Evidence exists that these proteins generate a radical species by reductive cleavage of S:-adenosylmethionine (SAM) through an unusual Fe-S centre [, ].
Probab=30.68 E-value=75 Score=28.69 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=28.9
Q ss_pred HHhcCCCCCceEEEeCC-ccCCCCCcHHHHHHHHH
Q 024423 33 FEYGGYPPKANYLFLGD-YVDRGKQSLETICLLLA 66 (268)
Q Consensus 33 l~~~~~~~~~~~vflGD-~vDrG~~s~evl~~l~~ 66 (268)
+++.||..-|-+++.|| |||--.+...++-.+++
T Consensus 9 m~~rGWd~lDvilVtGDAYVDHPsFG~AiIgR~Le 43 (302)
T PF08497_consen 9 MKARGWDELDVILVTGDAYVDHPSFGAAIIGRVLE 43 (302)
T ss_pred HHHcCCccccEEEEeCcccccCcchhHHHHHHHHH
Confidence 45679998898999999 99998888888887765
No 140
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=28.52 E-value=43 Score=29.77 Aligned_cols=39 Identities=26% Similarity=0.468 Sum_probs=24.1
Q ss_pred eEEEeCCccCCCCCcHHHH-HHHHHhhhhCCCeEEEecCCcccc
Q 024423 43 NYLFLGDYVDRGKQSLETI-CLLLAYKIKYPENFFLLRGNHECA 85 (268)
Q Consensus 43 ~~vflGD~vDrG~~s~evl-~~l~~lk~~~p~~v~~lrGNHE~~ 85 (268)
+++|+||+|.+ ...+++ ..|-.+|.+++..+.+ .|=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vI--aNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVI--ANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEE--EcCccc
Confidence 58999999954 233333 4556677777765444 455554
No 141
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=27.73 E-value=60 Score=28.62 Aligned_cols=9 Identities=56% Similarity=1.066 Sum_probs=6.1
Q ss_pred EEEecCCCC
Q 024423 17 VFAGDVHGQ 25 (268)
Q Consensus 17 ~viGDiHG~ 25 (268)
.++||+=|.
T Consensus 4 LfiGDvvGk 12 (266)
T COG1692 4 LFIGDVVGK 12 (266)
T ss_pred EEEecccCc
Confidence 667777765
No 142
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=26.47 E-value=1.3e+02 Score=25.84 Aligned_cols=40 Identities=23% Similarity=0.335 Sum_probs=28.1
Q ss_pred HHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCCCCC
Q 024423 189 VSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYC 230 (268)
Q Consensus 189 ~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~ 230 (268)
+.+.+-..|+++||-||..+..+++.. ++++| +||-=|+.
T Consensus 197 ~A~~l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNfi 236 (239)
T smart00854 197 LAHALIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEcccccc
Confidence 333343469999999999998899876 45554 67765553
No 143
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=24.89 E-value=34 Score=32.91 Aligned_cols=56 Identities=25% Similarity=0.380 Sum_probs=36.8
Q ss_pred hhhHHHHHHhCCCc----eEEeeeeeecc--CeE-EecCceEEEE---ecCCCCCCCCCCcEEEEEE
Q 024423 186 PDKVSEFLKRHDLD----LVCRAHQVVED--GYE-FFADRQLVTI---FSAPNYCGEFDNAGAMMSI 242 (268)
Q Consensus 186 ~~~~~~fl~~~~~~----~iIrgH~~~~~--G~~-~~~~~~~iti---fSa~~y~~~~~n~ga~l~i 242 (268)
++..++.|+..|++ -||.||+|+.+ |-. +-.+||++.| ||-. |.....=+|=.+..
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskA-Yqs~TgiAGYTllY 580 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKA-YQSTTGIAGYTLLY 580 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhh-hhcccccceeEeee
Confidence 44567788888887 79999999875 332 3478899988 4433 55543334444433
No 144
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.62 E-value=96 Score=28.55 Aligned_cols=49 Identities=22% Similarity=0.484 Sum_probs=31.4
Q ss_pred CCeEEEEecCC-CCHHHHHHHHHhcCCCCCceEEE-eCCccC--CCCCcHHHHHHHHHhhh
Q 024423 13 KPLFVFAGDVH-GQYSDLLRLFEYGGYPPKANYLF-LGDYVD--RGKQSLETICLLLAYKI 69 (268)
Q Consensus 13 ~p~i~viGDiH-G~~~~l~~~l~~~~~~~~~~~vf-lGD~vD--rG~~s~evl~~l~~lk~ 69 (268)
.|.+.++||.| ||+.++... +..++| .-|+=. -|+....++.+..+|..
T Consensus 56 ~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 56 TPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred CCceEEecccccccchhhccC--------CCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 45459999999 888876532 223444 555422 26777788777777653
No 145
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.86 E-value=2.9e+02 Score=21.67 Aligned_cols=59 Identities=22% Similarity=0.237 Sum_probs=38.7
Q ss_pred HHHHHHHHHhcCCCCCceEEEeCCccCCCCCc-----HHHHHHHHH-hhhhCCCeEEEe---cCCcccc
Q 024423 26 YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQS-----LETICLLLA-YKIKYPENFFLL---RGNHECA 85 (268)
Q Consensus 26 ~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s-----~evl~~l~~-lk~~~p~~v~~l---rGNHE~~ 85 (268)
+++|++.++..+....--++|+|+-.|++-+| +...-.+.. ++ ..|..+.+| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk-~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALK-HAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHH-hCCCceEEEEEEecCCCcc
Confidence 78889999887666565567999998886544 333333332 33 577776555 4777765
No 146
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=23.75 E-value=66 Score=28.33 Aligned_cols=37 Identities=27% Similarity=0.438 Sum_probs=24.3
Q ss_pred eEEEeCCccCCCCCcHHHHHHHHHhhhhCCCeEEEecC
Q 024423 43 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 80 (268)
Q Consensus 43 ~~vflGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrG 80 (268)
+++|+||+|.+.-.. -+-..|-.+|.+++..+.+.-|
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEECC
Confidence 478999999874322 3446667777777766555433
No 147
>PRK00955 hypothetical protein; Provisional
Probab=23.40 E-value=1.1e+02 Score=30.76 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=28.7
Q ss_pred HHhcCCCCCceEEEeCC-ccCCCCCcHHHHHHHHH
Q 024423 33 FEYGGYPPKANYLFLGD-YVDRGKQSLETICLLLA 66 (268)
Q Consensus 33 l~~~~~~~~~~~vflGD-~vDrG~~s~evl~~l~~ 66 (268)
+++.||..-|-+++.|| |||--+..+++|-.++.
T Consensus 6 ~~~~gw~~~d~i~v~gdayvdhp~fg~a~i~r~L~ 40 (620)
T PRK00955 6 MKKRGWDELDFILVTGDAYVDHPSFGTAIIGRVLE 40 (620)
T ss_pred HHHcCCCccCEEEEeCcccccCCccHHHHHHHHHH
Confidence 45678998898999999 99999998888877764
No 148
>PRK01254 hypothetical protein; Provisional
Probab=23.00 E-value=1.8e+02 Score=29.62 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=30.0
Q ss_pred HHHhcCCCCCceEEEeCC-ccCCCCCcHHHHHHHHH
Q 024423 32 LFEYGGYPPKANYLFLGD-YVDRGKQSLETICLLLA 66 (268)
Q Consensus 32 ~l~~~~~~~~~~~vflGD-~vDrG~~s~evl~~l~~ 66 (268)
=+++.||..-|-+++.|| |||--.+...+|-.+++
T Consensus 31 em~~~Gwd~~DiilVtGDAYVDHPsFG~AiigR~Le 66 (707)
T PRK01254 31 EMDQLGWDSCDIIIVTGDAYVDHPSFGMAIIGRMLE 66 (707)
T ss_pred HHHHcCCCccCEEEEeCcccccCccchHHHHHHHHH
Confidence 356789999999999999 99999999998887765
No 149
>COG4119 Predicted NTP pyrophosphohydrolase [DNA replication, recombination, and repair / General function prediction only]
Probab=22.35 E-value=1.7e+02 Score=23.08 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=21.8
Q ss_pred hHHHHHHhCCCceEEeeeeeeccCeEEecCceEEEEecCC
Q 024423 188 KVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAP 227 (268)
Q Consensus 188 ~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~ 227 (268)
+-++|.+..|+.. -|--. .-|-...-++||+|.|+--
T Consensus 55 ArREf~EE~Gi~v--dGP~~-~lG~~kQ~GGKvVta~~ve 91 (161)
T COG4119 55 ARREFSEEIGICV--DGPRI-DLGSLKQSGGKVVTAFGVE 91 (161)
T ss_pred HHHHhhhhhceee--cCchh-hhhhhccCCCcEEEEEeee
Confidence 4567888777543 33211 2233334678999999843
No 150
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=20.86 E-value=2.4e+02 Score=28.01 Aligned_cols=64 Identities=20% Similarity=0.142 Sum_probs=38.3
Q ss_pred HHHHHHHHHhcCCCC--CceEEEeCCcc--CCCCCcHHHHH----HHHHh-hhhCC-CeEEEecCCccccchhh
Q 024423 26 YSDLLRLFEYGGYPP--KANYLFLGDYV--DRGKQSLETIC----LLLAY-KIKYP-ENFFLLRGNHECASINR 89 (268)
Q Consensus 26 ~~~l~~~l~~~~~~~--~~~~vflGD~v--DrG~~s~evl~----~l~~l-k~~~p-~~v~~lrGNHE~~~~~~ 89 (268)
...+..+|+.++-.. -|-++-.||.+ |+++.+.+... .+..+ ...+| ..|+...||||..-.|.
T Consensus 194 ~~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~ 267 (577)
T KOG3770|consen 194 KRLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL 267 (577)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh
Confidence 344555665544322 34466799999 56776654432 22222 22355 45899999999987764
No 151
>PF05413 Peptidase_C34: Putative closterovirus papain-like endopeptidase; InterPro: IPR008744 RNA-directed RNA polymerase (RdRp) (2.7.7.48 from EC) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage [, ]. It catalyses synthesis of the RNA strand complementary to a given RNA template, but the precise molecular mechanism remains unclear. The postulated RNA replication process is a two-step mechanism. First, the initiation step of RNA synthesis begins at or near the 3' end of the RNA template by means of a primer-independent (de novo) mechanism. The de novo initiation consists in the addition of a nucleotide tri-phosphate (NTP) to the 3'-OH of the first initiating NTP. During the following so-called elongation phase, this nucleotidyl transfer reaction is repeated with subsequent NTPs to generate the complementary RNA product []. All the RNA-directed RNA polymerases, and many DNA-directed polymerases, employ a fold whose organisation has been likened to the shape of a right hand with three subdomains termed fingers, palm and thumb []. Only the catalytic palm subdomain, composed of a four-stranded antiparallel beta-sheet with two alpha-helices, is well conserved among all of these enzymes. In RdRp, the palm subdomain comprises three well conserved motifs (A, B and C). Motif A (D-x(4,5)-D) and motif C (GDD) are spatially juxtaposed; the Asp residues of these motifs are implied in the binding of Mg2+ and/or Mn2+. The Asn residue of motif B is involved in selection of ribonucleoside triphosphates over dNTPs and thus determines whether RNA is synthesised rather than DNA []. The domain organisation [] and the 3D structure of the catalytic centre of a wide range of RdPp's, even those with a low overall sequence homology, are conserved. The catalytic centre is formed by several motifs containing a number of conserved amino acid residues. There are 4 superfamilies of viruses that cover all RNA containing viruses with no DNA stage: Viruses containing positive-strand RNA or double-strand RNA, except retroviruses and Birnaviridae: viral RNA-directed RNA polymerases including all positive-strand RNA viruses with no DNA stage, double-strand RNA viruses, and the Cystoviridae, Reoviridae, Hypoviridae, Partitiviridae, Totiviridae families. Mononegavirales (negative-strand RNA viruses with non-segmented genomes). Negative-strand RNA viruses with segmented genomes, i.e. Orthomyxoviruses (including influenza A, B, and C viruses, Thogotoviruses, and the infectious salmon anemia virus), Arenaviruses, Bunyaviruses, Hantaviruses, Nairoviruses, Phleboviruses, Tenuiviruses and Tospoviruses. Birnaviridae family of dsRNA viruses. The RNA-directed RNA polymerases in the first of the above superfamilies can be divided into the following three subgroups: All positive-strand RNA eukaryotic viruses with no DNA stage. All RNA-containing bacteriophages -there are two families of RNA-containing bacteriophages: Leviviridae (positive ssRNA phages) and Cystoviridae (dsRNA phages). Reoviridae family of dsRNA viruses. This signature is found in the RNA-direct RNA polymerase of apple chlorotic leaf spot virus and cherry mottle virus.; GO: 0003723 RNA binding, 0003968 RNA-directed RNA polymerase activity, 0005524 ATP binding, 0019079 viral genome replication
Probab=20.49 E-value=47 Score=23.87 Aligned_cols=10 Identities=60% Similarity=0.800 Sum_probs=7.7
Q ss_pred eEEEecCCcc
Q 024423 74 NFFLLRGNHE 83 (268)
Q Consensus 74 ~v~~lrGNHE 83 (268)
.-.+|||||=
T Consensus 79 Gr~~LRGNHF 88 (92)
T PF05413_consen 79 GRMLLRGNHF 88 (92)
T ss_pred hheeecccce
Confidence 3478999993
Done!