BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024424
(268 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359486310|ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 218/266 (81%), Positives = 229/266 (86%), Gaps = 12/266 (4%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK DFAFVEFSDPRDADDARYSLNGRD DGSRIIVEFA+GGPRGPGGSREYLGRGPPPGS
Sbjct: 42 MKHDFAFVEFSDPRDADDARYSLNGRDFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGS 101
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL R RSYSRSPSPRRG
Sbjct: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLKRGRSYSRSPSPRRG 161
Query: 120 RSRSRSYSRGRSDSRS----RSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRK 175
RSRSRS SR S SRS RS KR+RS ER ERR+RSP DSRSPKRR+ SPP SKGRK
Sbjct: 162 RSRSRSRSRSYSRSRSYSQPRSSPKRERSAERLERRSRSPHDSRSPKRRKASPPPSKGRK 221
Query: 176 RSPTPDERSPQDQRSPSPRDRRQ-ANGSEYSGSPRGKSRSPVDDA--DGPEDRNY-RSPP 231
RSPTPDERSP+ +RSPSPRDR+Q NGS+YS SPR KSRSP DA D P DRNY RSP
Sbjct: 222 RSPTPDERSPK-ERSPSPRDRKQTTNGSDYSDSPRVKSRSPALDAERDSPRDRNYRRSPD 280
Query: 232 EENGRSRSRSLSPVPRDDRSPIDDDD 257
EENG SRS SP+PRDD SP+DDD+
Sbjct: 281 EENG--HSRSPSPIPRDDASPVDDDE 304
>gi|356572371|ref|XP_003554342.1| PREDICTED: uncharacterized protein LOC100789337 [Glycine max]
Length = 297
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 172/268 (64%), Positives = 196/268 (73%), Gaps = 28/268 (10%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK DFAFVEFSDPRDADDARYSL+GRDV+GSRIIVEFA+GGPRG SRE LGRG PPGS
Sbjct: 42 MKNDFAFVEFSDPRDADDARYSLDGRDVEGSRIIVEFAKGGPRG---SRENLGRGLPPGS 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSP---- 114
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIE+NC+NSPKK RS SRSP
Sbjct: 99 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKSSRHGRSLSRSPVRSH 158
Query: 115 SPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGR 174
SPRRGRSR RSYSR R+ SRSRSPV+R+RS + R SP SK R
Sbjct: 159 SPRRGRSRDRSYSRDRNYSRSRSPVRRERSP--------------VSEDRSQSPEPSKIR 204
Query: 175 KRSPTPDERSPQDQRSPSPRDRRQA---NGSEYSGSPRGKSRSPVDDADGPEDRNYRSPP 231
K S +PD+ SP+ + P+P + R A +GS+YS PRGKSRSP A ++ NY S P
Sbjct: 205 KHSTSPDQSSPRKRGDPAPGNDRLATLQDGSDYSDGPRGKSRSPASPARDHDEGNYDS-P 263
Query: 232 EENGRSRSRSLSPVPRDDRSPIDDDDNH 259
+ +GRS S S SP DDRSPID+DD++
Sbjct: 264 KASGRSHSPSRSPR-EDDRSPIDEDDDN 290
>gi|225439817|ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
Length = 307
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 194/274 (70%), Positives = 216/274 (78%), Gaps = 16/274 (5%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR-EYLGRGPPPG 59
MK DFAFVEFSDPRDADDARY+LNGRD DGSRIIVEFA+GGPRG G EYLGRGPPPG
Sbjct: 42 MKHDFAFVEFSDPRDADDARYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPG 101
Query: 60 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSP-SP 116
SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+KL RSYSRSP
Sbjct: 102 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRKLSRHGRSYSRSPVRS 161
Query: 117 RRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKR 176
R GRSRSRSYS RS SRSRSP KRDRS+ER ++R+ SPR RSP+ +R S P+SK RKR
Sbjct: 162 RHGRSRSRSYSPSRSYSRSRSPPKRDRSIER-DKRSGSPR-YRSPEPKRRSTPTSKPRKR 219
Query: 177 SPTPDERSPQDQRSPSPRDRRQANGSEYSGSPRGKSRSPV-DDADGPEDRNYRSPPEENG 235
SPTP++ PQ++ SP+ R Q EYS SPR KSRSPV + D P R YRSP + NG
Sbjct: 220 SPTPEDSRPQERISPNVYKREQP---EYSQSPREKSRSPVSSERDSPVARRYRSPSDANG 276
Query: 236 RSRSRSLSPVPRDDRSPIDDDD--NHGDPRGSES 267
RSRS+S PRD+RSP+D+D+ N PRGSES
Sbjct: 277 RSRSQS----PRDERSPLDEDEDNNSRSPRGSES 306
>gi|147774947|emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
Length = 306
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/274 (63%), Positives = 203/274 (74%), Gaps = 17/274 (6%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR-EYLGRGPPPG 59
MK DFAFVEFSDPRDADDARY+LNGRD DGSRIIVEFA+GGPRG G EYLGRGPPPG
Sbjct: 42 MKHDFAFVEFSDPRDADDARYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPG 101
Query: 60 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPR---SYSRSPSP 116
SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+KL ++
Sbjct: 102 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRKLSDMDGVTHDLQLDL 161
Query: 117 RRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKR 176
+ + ++ + + SRSP KRDRS+ER ++R+ SPR RSP+ +R S P+SK RKR
Sbjct: 162 AMAGAGAEVIAQV-AVTGSRSPPKRDRSIER-DKRSGSPR-YRSPEPKRRSTPTSKPRKR 218
Query: 177 SPTPDERSPQDQRSPSPRDRRQANGSEYSGSPRGKSRSPV-DDADGPEDRNYRSPPEENG 235
SPTP++ PQ++ SP+ R Q EYS SPR KSRSPV + D P R YRSP + NG
Sbjct: 219 SPTPEDSRPQERISPNVYKREQP---EYSQSPREKSRSPVSSERDSPVARRYRSPSDANG 275
Query: 236 RSRSRSLSPVPRDDRSPI--DDDDNHGDPRGSES 267
RSRS+S PRD+RSP+ D+DBN PRGSES
Sbjct: 276 RSRSQS----PRDERSPLDEDEDBNSRSPRGSES 305
>gi|449451689|ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449451691|ref|XP_004143595.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
gi|449507559|ref|XP_004163066.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449507562|ref|XP_004163067.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
Length = 309
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 200/269 (74%), Positives = 224/269 (83%), Gaps = 11/269 (4%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEFSDPRDADDARYSLNGRDV GSRIIVE A+G PRGPGGSREYLGRGPP G+
Sbjct: 42 MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPP-GT 100
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGR 120
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIE+NCQNSPKKL+ SYSRSPSPRRGR
Sbjct: 101 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGR 160
Query: 121 SRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTP 180
SRSRSYSRGRS SRSRSPVKRDRS+ER ++R+RSPR SPKR SPP K KRSPTP
Sbjct: 161 SRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPP-PKAMKRSPTP 219
Query: 181 DERSPQD--QRSPSPRDRRQANGSEYSGSPRGKSRSPVD---DADGPEDRNYRSPPEENG 235
DERSP++ +RS SP +R + S SPRG+SRSP+D D +G RNYR EENG
Sbjct: 220 DERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRR--EENG 277
Query: 236 RSRSRSLSPVPRDDRSPIDDDDNHGDPRG 264
SRS SP+PR++RSP++D+DN+G PRG
Sbjct: 278 --YSRSPSPLPREERSPVNDEDNNGSPRG 304
>gi|297736448|emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 176/203 (86%), Positives = 183/203 (90%), Gaps = 6/203 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK DFAFVEFSDPRDADDARYSLNGRD DGSRIIVEFA+GGPRGPGGSREYLGRGPPPGS
Sbjct: 74 MKHDFAFVEFSDPRDADDARYSLNGRDFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGS 133
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL R RSYSRSPSPRRG
Sbjct: 134 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLKRGRSYSRSPSPRRG 193
Query: 120 RSRSRSYSRGRSDSRS----RSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRK 175
RSRSRS SR S SRS RS KR+RS ER ERR+RSP DSRSPKRR+ SPP SKGRK
Sbjct: 194 RSRSRSRSRSYSRSRSYSQPRSSPKRERSAERLERRSRSPHDSRSPKRRKASPPPSKGRK 253
Query: 176 RSPTPDERSPQDQRSPSPRDRRQ 198
RSPTPDERSP+ +RSPSPRD+RQ
Sbjct: 254 RSPTPDERSPK-ERSPSPRDQRQ 275
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 193/261 (73%), Gaps = 26/261 (9%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEFSDPRDADDARY L+G+D+DGSRIIVEFA+G PRG SREYLGRGPPPGS
Sbjct: 42 MKRDYAFVEFSDPRDADDARYHLDGKDLDGSRIIVEFAKGVPRG---SREYLGRGPPPGS 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC+NSPKKL R RSYSRSPSPRRG
Sbjct: 99 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLKRGRSYSRSPSPRRG 158
Query: 120 RSRS-RSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSP 178
RSRS P KR+RS E +R SR PK N P SKGRKRSP
Sbjct: 159 RSRSPSYSRGRSYSRSRSPPPKRERSFENEDRSL-----SREPK---NGVP-SKGRKRSP 209
Query: 179 TPDERSPQDQRSPSPRDRR---QANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENG 235
TPDE SP+ PSP+ R+ Q + S+YSGSPR +SRSP D P D Y SP + NG
Sbjct: 210 TPDEGSPR----PSPKSRKLDDQQDRSDYSGSPR-RSRSP--DRKSPGDGRYGSPAQTNG 262
Query: 236 RSRSRSLSPVPRDDRSPIDDD 256
RSRS S S PRD RSP+DDD
Sbjct: 263 RSRSPSPS--PRDGRSPVDDD 281
>gi|363807264|ref|NP_001242616.1| uncharacterized protein LOC100813237 [Glycine max]
gi|255647309|gb|ACU24121.1| unknown [Glycine max]
Length = 299
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 170/270 (62%), Positives = 191/270 (70%), Gaps = 29/270 (10%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK DFAFVEFSDPRDADDARY+L+GRDV+GSRIIVEFA+GGPRG REY+GRGPPPGS
Sbjct: 42 MKNDFAFVEFSDPRDADDARYNLDGRDVEGSRIIVEFAKGGPRG-SRDREYMGRGPPPGS 100
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSPSPRR 118
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIE+NC+NSPKKL R RS SRSP R
Sbjct: 101 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKLSQRGRSLSRSPVRSR 160
Query: 119 GRSRS----RSYSRGRSDSRSRSPVKRDRS-VERFERRTRSPRDSRSPKRRRNSPPSSKG 173
R RSYSR S SRSRSPV+R+RS V ++R P SK
Sbjct: 161 SPRRGRSTDRSYSRDHSYSRSRSPVRRERSPVSEDRSQSREP---------------SKI 205
Query: 174 RKRSPTPDERSPQDQRSPSPRDRRQA---NGSEYSGSPRGKSRSPVDDADGPEDRNYRSP 230
RK S +PD+ SP+ + SP + R A +GS+YS PRGKSRSP A ++ Y S
Sbjct: 206 RKHSASPDQSSPRKRGDTSPGNDRLATHQDGSDYSDGPRGKSRSPASPARDRDEGGYDS- 264
Query: 231 PEENGRSRSRSLSPVPRDDRSPID-DDDNH 259
P+ NG SRS S SP DDRSPID DDDNH
Sbjct: 265 PKVNGHSRSPSRSPRD-DDRSPIDEDDDNH 293
>gi|118487500|gb|ABK95577.1| unknown [Populus trichocarpa]
Length = 252
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 173/276 (62%), Positives = 194/276 (70%), Gaps = 37/276 (13%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEFSDPRDADDAR+ L+G++ DGSRIIVEFA+G PRG SREYLGRGPPPGS
Sbjct: 1 MKRDYAFVEFSDPRDADDARHYLDGKEFDGSRIIVEFAKGVPRG---SREYLGRGPPPGS 57
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSP----S 115
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC+NSPKKL R +SYSRSP S
Sbjct: 58 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLTRGKSYSRSPGRSRS 117
Query: 116 PRRGRSRS-RSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGR 174
P RGRSRS P KR+RSVE E R+ SP P S+K R
Sbjct: 118 PHRGRSRSPSYSRGRSYSRSRSPPPKRERSVEN-ENRSLSP-----------EPKSTKAR 165
Query: 175 KRSPTPDERSPQDQRSPSPRDRRQANGS--EYSGSPRGKSRSPVDDADGPEDRNYRSPPE 232
KRSPTPDE SP+ PSP+ R+ + EYSGSP G+SRS + P D YRS P+
Sbjct: 166 KRSPTPDEGSPR----PSPKSRKLDDEQDREYSGSPTGRSRS---RSRSPRDERYRS-PQ 217
Query: 233 ENGRSRSRSLSPVPRDDRSPIDDD--DNHGDPRGSE 266
NGRSR P PRDDRSP+DDD DN+ PR S+
Sbjct: 218 TNGRSR----IPSPRDDRSPVDDDYEDNNRSPRDSD 249
>gi|356572373|ref|XP_003554343.1| PREDICTED: uncharacterized protein LOC100789862 [Glycine max]
Length = 287
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 177/274 (64%), Positives = 195/274 (71%), Gaps = 36/274 (13%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK DFAFV+FSDPRDADDARY+L+GRDVDGSRIIVEFA+G PRG SREYLGRGPPPGS
Sbjct: 42 MKNDFAFVDFSDPRDADDARYNLDGRDVDGSRIIVEFAKGAPRG---SREYLGRGPPPGS 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL---RPRSYSRSP--- 114
GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNC+NSPKKL R RSYSRSP
Sbjct: 99 GRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLSTRRGRSYSRSPVRS 158
Query: 115 -SPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKG 173
SP RGRSR RSYSR RS SRSRSPV+R+ S R E R++SP +NSP SK
Sbjct: 159 RSPHRGRSRDRSYSRDRSYSRSRSPVRREESPVR-EDRSQSP-------DHKNSPQPSKT 210
Query: 174 RKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEE 233
RK SP+PD RSPQ + SP + R SRSP D PEDR Y S P+
Sbjct: 211 RKHSPSPD-RSPQKRGDTSPDNDRL-------------SRSPARD---PEDRGYDS-PKV 252
Query: 234 NGRSRSRSLSPVPRDDRSPIDDDDNHGDPRGSES 267
NGRS S S SP D DD+++ PRGSES
Sbjct: 253 NGRSGSPSCSPRDDDRSPIDDDNNHRHSPRGSES 286
>gi|356505156|ref|XP_003521358.1| PREDICTED: uncharacterized protein LOC100812698 [Glycine max]
Length = 287
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 166/282 (58%), Positives = 181/282 (64%), Gaps = 52/282 (18%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK DFAFV+FSDPRDADDARY+L+GRDVDGSRIIVEFA+G PRG SREYLGRGPPPGS
Sbjct: 42 MKNDFAFVDFSDPRDADDARYNLDGRDVDGSRIIVEFAKGAPRG---SREYLGRGPPPGS 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL---RPRSYSRSP--- 114
GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNC+NSPKKL R RSYSRSP
Sbjct: 99 GRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLSTRRGRSYSRSPVRS 158
Query: 115 --------SPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRN 166
R R SPV+ DR S+SP+ +N
Sbjct: 159 HSPRRGRSRDRSYSRDRSYSRSRSPVRREESPVREDR--------------SQSPQ-HKN 203
Query: 167 SPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRN 226
SP SK RK SP+PD RSPQ + SP + R SRSP D EDR
Sbjct: 204 SPQPSKTRKHSPSPD-RSPQRRGDTSPDNDRL-------------SRSPARDR---EDRG 246
Query: 227 YRSPPEENGRSRSRSLSPVPRDDRSPIDDDDNH-GDPRGSES 267
Y S P+ NGRS S S SP DDRSPIDD+DNH PRGSES
Sbjct: 247 YDS-PKVNGRSGSPSRSPRD-DDRSPIDDEDNHRHSPRGSES 286
>gi|388495254|gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 172/278 (61%), Positives = 190/278 (68%), Gaps = 44/278 (15%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSRE-------YLG 53
MKRD+AFVEFSDPRDADDARY+L+GRDVDGSR+IVEFA+G PRG Y+G
Sbjct: 42 MKRDYAFVEFSDPRDADDARYNLDGRDVDGSRLIVEFAKGVPRGSREGGGGRDRDREYMG 101
Query: 54 RGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYS 111
RGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIE+NC+NSPKKL PRS S
Sbjct: 102 RGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKLSRHPRSDS 161
Query: 112 RSP----SPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNS 167
RSP SPRRGRSR RSY+ RS SRSRSPV+RDRS P+ R S
Sbjct: 162 RSPVRSRSPRRGRSRDRSYTPERSYSRSRSPVRRDRSP--------------FPEDRSRS 207
Query: 168 PPSSKGRKRSPTPDERSPQDQRSPSP----RDRRQANGSEYSGSPRGKSRSPVDDADGPE 223
PP S+ RK S +PD SPQ + SP R +GS+YS R KSRSP D D
Sbjct: 208 PP-SRTRKHSLSPDLDSPQKRSDASPPGNDRLATTRDGSDYSDDARAKSRSPARDLDDD- 265
Query: 224 DRNYRSPPEENGRSRSRSLSPVPR-DDRSPI-DDDDNH 259
SP +NGRSRS S PR DDRSPI +DDDNH
Sbjct: 266 -----SPKADNGRSRSAS----PRDDDRSPIEEDDDNH 294
>gi|242052053|ref|XP_002455172.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|241927147|gb|EES00292.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|448878302|gb|AGE46114.1| arginine/serine-rich splicing factor RS2Z34 transcript I [Sorghum
bicolor]
Length = 296
Score = 239 bits (611), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 156/226 (69%), Positives = 171/226 (75%), Gaps = 22/226 (9%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK +FAFVEFSDPRDADDARY L+ R+ DGSR+IVEFA+G PRGPGGSREY+G+GPPPGS
Sbjct: 55 MKHEFAFVEFSDPRDADDARYHLDDREFDGSRLIVEFAKGIPRGPGGSREYMGKGPPPGS 114
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCG+DGHWARDCKAGDWKN+CYRCG+RGHIER+CQNSPK L R RSYSRSPSPRR
Sbjct: 115 GRCFNCGMDGHWARDCKAGDWKNRCYRCGDRGHIERDCQNSPKNLRRGRSYSRSPSPRRE 174
Query: 120 RSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRR-------RNSPPSSK 172
RS RSYSR RS SRS R S R RSPRDSRSP+R R SP SK
Sbjct: 175 RSPVRSYSRSRSRGYSRSRSPRQNS-----RDERSPRDSRSPRRSPRDSRSPRRSPSLSK 229
Query: 173 GRKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSP-RGKSRSPVD 217
GR RSP SP RSP+PR+R NGS+YS SP R SRSP D
Sbjct: 230 GRDRSP-----SPNGSRSPAPRER---NGSDYSMSPRRDDSRSPAD 267
>gi|125550625|gb|EAY96334.1| hypothetical protein OsI_18237 [Oryza sativa Indica Group]
Length = 331
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 196/273 (71%), Gaps = 24/273 (8%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFSDPRDA++ARY+L+GRDVDGSRI+VEFA+G PRGPGGSREY+GRGPPPG+
Sbjct: 50 LKRDYAFIEFSDPRDAEEARYNLDGRDVDGSRILVEFAKGVPRGPGGSREYMGRGPPPGT 109
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSPSPRRG
Sbjct: 110 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRG 169
Query: 120 RSRSRSYSRGRSDSRSRSPVKRDRSVERFERR---TRSPRDSRSPKRRRNSPPSSKGRKR 176
R RSRSYSR RS SRS S + R RS S S RR+ P++ +KR
Sbjct: 170 RGRSRSYSRSRSRSRSYSRSRSRSLSGSPRARRELERSRSLSYSRSPRRSISPAANEKKR 229
Query: 177 SPTPDE----RSPQDQRSPSPRDRRQANGSEYSGSPRGK--SRSPVDDADGPEDRNYRSP 230
SPTPD RSPQDQ SP P+D + NGS++ SPRG+ SRSP D YRSP
Sbjct: 230 SPTPDGSRSPRSPQDQVSPPPKDNAERNGSDHGDSPRGRENSRSPSD--------GYRSP 281
Query: 231 PEENGRSRSRSLSPVPRDDRSPIDDDDNHGDPR 263
NGR SP PR++ SP D+ PR
Sbjct: 282 AAANGR------SPSPRNNGSPSPMDNGSRSPR 308
>gi|115461779|ref|NP_001054489.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|113578040|dbj|BAF16403.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|222630005|gb|EEE62137.1| hypothetical protein OsJ_16924 [Oryza sativa Japonica Group]
Length = 323
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 186/274 (67%), Gaps = 26/274 (9%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFSDPRDA++ARY+L+GRDVDGSRI+VEFA+G PRGPGGSREY+GRGPPPG+
Sbjct: 42 LKRDYAFIEFSDPRDAEEARYNLDGRDVDGSRILVEFAKGVPRGPGGSREYMGRGPPPGT 101
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYS----RSPS 115
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSYS
Sbjct: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSCSPSPRRG 161
Query: 116 PRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRK 175
R RS SRS SR RS SRSRS R E RR SP +++ +K
Sbjct: 162 RGRSRSYSRSRSRSRSYSRSRSRSLSGSPRARRELERSRSLSYSRSPRRSISPAANE-KK 220
Query: 176 RSPTPD----ERSPQDQRSPSPRDRRQANGSEYSGSPRGK--SRSPVDDADGPEDRNYRS 229
RSPTPD RSPQDQ SP P+D + NGS++ SPRG+ SRSP D YRS
Sbjct: 221 RSPTPDGSRSPRSPQDQVSPPPKDNAERNGSDHGDSPRGRENSRSPSD--------GYRS 272
Query: 230 PPEENGRSRSRSLSPVPRDDRSPIDDDDNHGDPR 263
P NGR SP PR++ SP D+ PR
Sbjct: 273 PAAANGR------SPSPRNNGSPSPMDNGSRSPR 300
>gi|242089323|ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|241945779|gb|EES18924.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|448878296|gb|AGE46111.1| arginine/serine-rich splicing factor RS2Z39 [Sorghum bicolor]
Length = 341
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/284 (59%), Positives = 192/284 (67%), Gaps = 17/284 (5%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFSD RDAD+ARY L+GRDVDGSRI+VEFA+G PRGPGGSREY+GRGPPPG+
Sbjct: 42 LKRDYAFIEFSDHRDADEARYQLDGRDVDGSRIVVEFAKGVPRGPGGSREYMGRGPPPGT 101
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ + R RSYSRSPSPRRG
Sbjct: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSVRRERSYSRSPSPRRG 161
Query: 120 RSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKR------RRNSPPSSKG 173
R RS SYSR RS SRSRS + R D RS R++ P K
Sbjct: 162 RGRSPSYSRSRSRSRSRSYSRSRSLSGSPRGGRRDRDDRRSRSLSYSRSPMRSASPPPKE 221
Query: 174 RKRSPTPD------ERSPQDQ-RSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRN 226
++RSPTPD RSPQDQ SP P+D + NGS+ SPRG+ S +
Sbjct: 222 KERSPTPDGSRSPRSRSPQDQVMSPPPKDNGEGNGSDRGESPRGRETSRSRSRSRSPSGD 281
Query: 227 YRSPPEENGRSRS--RSLSPVPRDDRSPIDDDDNHGDPRGSESN 268
RS P NGRS S SP PR DRSP D P+G+ +N
Sbjct: 282 NRS-PAANGRSPSPRGDRSPSPRADRSPSPKADRSPSPKGNGNN 324
>gi|218192579|gb|EEC75006.1| hypothetical protein OsI_11073 [Oryza sativa Indica Group]
Length = 294
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/272 (55%), Positives = 177/272 (65%), Gaps = 33/272 (12%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP-GGSREYLGRGPPPG 59
+KRD+AF+EFSD RDAD+ARY+L+GRDVDGSRI+VEFA+G PRG GGSREY+GRGPPPG
Sbjct: 42 LKRDYAFIEFSDTRDADEARYNLDGRDVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPG 101
Query: 60 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRR 118
+GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSPS
Sbjct: 102 TGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPS--- 158
Query: 119 GRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSP 178
R R R RS S S RR+ P++ G++RSP
Sbjct: 159 ----PRRGRGHGRSRSYSRSRSRSYRGRRDRDDRRSRSLSYSRSPRRSISPAANGKERSP 214
Query: 179 TPD----ERSPQDQRSPSPRDRRQANGSEYSGSPRGK--SRSPVDDADGPEDRNYRSPPE 232
+P+ RSPQD+ SP P+D + NG SPRG+ SRSP D YRSP
Sbjct: 215 SPNGRRSPRSPQDRVSPPPKDNDEHNGD----SPRGRENSRSPSD--------GYRSPVA 262
Query: 233 ENGRSRSRSLSPVPRDDRSPIDDDDNHGDPRG 264
NGR SP P+++ SP D+N PRG
Sbjct: 263 ANGR------SPSPKNNGSPSPMDNNSRSPRG 288
>gi|388509088|gb|AFK42610.1| unknown [Medicago truncatula]
Length = 305
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/283 (58%), Positives = 187/283 (66%), Gaps = 50/283 (17%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR---EYLGRGPP 57
MK D+AFVEF DPRDADDARY+L+GRD+DGSR+IVEFA+G PRG SR EYLGRGPP
Sbjct: 42 MKHDYAFVEFRDPRDADDARYNLDGRDIDGSRLIVEFAKGVPRGSRDSRDSREYLGRGPP 101
Query: 58 PGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSPS 115
PGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIE+NC+NSPKKL RS SRSP
Sbjct: 102 PGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKLSRHARSVSRSPG 161
Query: 116 PRRGRSRSRSYSR----------------GRSDSRSRSPVKRDRSVERFERRTRSPRDSR 159
R +RSRS +R RS SRSRSPV+RDRS +
Sbjct: 162 RSRSPARSRSPARSRSPRRGRSRDRSYSPARSYSRSRSPVRRDRSPVASD---------- 211
Query: 160 SPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQA--NGSEYSGSPRGKSRSPVD 217
R SPP SK RK S +P + SPQ SP DR A +GS+YS R KSRSP
Sbjct: 212 ----RSRSPPPSKSRKYSRSP-KGSPQKSTSPG-NDRVVATQDGSDYSDGARVKSRSPSR 265
Query: 218 DADGPEDRNYRSPPEENGRSRSRSLSPVPRD-DRSPIDDDDNH 259
D D P+ NGRSRSRS S PRD DRSP+++DD++
Sbjct: 266 DND--------DSPKANGRSRSRSRS--PRDEDRSPVEEDDDN 298
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/137 (84%), Positives = 122/137 (89%), Gaps = 9/137 (6%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEFSDPRDADDAR+ L+G+D DGSRIIVEFA+G PRG SREYLGRGPPPGS
Sbjct: 42 MKRDYAFVEFSDPRDADDARHYLDGKDFDGSRIIVEFAKGVPRG---SREYLGRGPPPGS 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYS----RSP 114
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC+NSPKKL R RSYS RSP
Sbjct: 99 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLTKRGRSYSRSPDRSP 158
Query: 115 SPRRGRSRSRSYSRGRS 131
SP RGRSRS SYSRGRS
Sbjct: 159 SPHRGRSRSPSYSRGRS 175
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/136 (83%), Positives = 122/136 (89%), Gaps = 8/136 (5%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEFSDPRDADDAR+ L+G++ DGSRIIVEFA+G PRG SREYLGRGPPPGS
Sbjct: 42 MKRDYAFVEFSDPRDADDARHYLDGKEFDGSRIIVEFAKGVPRG---SREYLGRGPPPGS 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSP----S 115
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC+NSPKKL R +SYSRSP S
Sbjct: 99 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLTRGKSYSRSPGRSRS 158
Query: 116 PRRGRSRSRSYSRGRS 131
P RGRSRS SYSRGRS
Sbjct: 159 PHRGRSRSPSYSRGRS 174
>gi|195611398|gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223973611|gb|ACN30993.1| unknown [Zea mays]
gi|413942175|gb|AFW74824.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413942176|gb|AFW74825.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|448878178|gb|AGE46052.1| arginine/serine-rich splicing factor RS2Z37B transcript I [Zea
mays]
Length = 333
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 157/264 (59%), Positives = 179/264 (67%), Gaps = 19/264 (7%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFS+ RDAD+ARY L+GRDVDGSRI+VEFA+G PRGPGGSREY+GRGPPPG+
Sbjct: 42 LKRDYAFIEFSEHRDADEARYQLDGRDVDGSRIVVEFAKGVPRGPGGSREYMGRGPPPGT 101
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ + R RSYSRSPSPRRG
Sbjct: 102 GRCFNCGMDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSVRRERSYSRSPSPRRG 161
Query: 120 RSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPS----SKGRK 175
R RS SYSR RS SRSRS + R D RS + P +K ++
Sbjct: 162 RGRSPSYSRSRSRSRSRSYSRSRSLSGSPRGGRRDRDDRRSRSLSYSRSPMRSPPAKEKE 221
Query: 176 RSPTPD------ERSPQDQ-RSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYR 228
RSPTP RSPQDQ SP P+D NGS+ SPRG+ S R
Sbjct: 222 RSPTPGGSRSPRSRSPQDQVMSPPPKDNGDRNGSDRGDSPRGRENSRSRSRSRSPSGGNR 281
Query: 229 SPPEENGRSRSRSLSPVPRDDRSP 252
S P NGR SP PR DR+P
Sbjct: 282 S-PAANGR------SPSPRGDRTP 298
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 164/308 (53%), Positives = 181/308 (58%), Gaps = 95/308 (30%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR--------EYL 52
MK +FAFVEFSDPRDADDARY+L+GRD DGSR+IVEFA+G PRG GGSR EY+
Sbjct: 45 MKHEFAFVEFSDPRDADDARYNLDGRDFDGSRMIVEFAKGVPRGQGGSRDRDRGGDREYM 104
Query: 53 GRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYS 111
GRGPPPGSGRCFNCGIDGHWARDCKAGDWKN+CYRCG+ GHIER+CQNSPK L R +SYS
Sbjct: 105 GRGPPPGSGRCFNCGIDGHWARDCKAGDWKNRCYRCGDSGHIERDCQNSPKNLRRGKSYS 164
Query: 112 RSPSPRRGRSRSRSYSRG--------------------------------------RSDS 133
RSPSPRRGR R RSYSR +S
Sbjct: 165 RSPSPRRGRVRDRSYSRSRSRSYSRSLSPRRDERRSRSPRDSRSPRRSPRDSRSPMKSPC 224
Query: 134 RSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSP 193
SRSPVK SPRDSRSP R SP +KGR RSPTP
Sbjct: 225 DSRSPVK-------------SPRDSRSPVR---SPSPAKGRARSPTP------------- 255
Query: 194 RDRRQANGSEYSGSPRGKSRSPV-DDADGPEDRNYR-SPPEENGRSRSRSLSPVPRDDRS 251
NGS S +PRG SRSP+ D+ P DR R P NGR SP PRDD
Sbjct: 256 ------NGSR-SPAPRGNSRSPMRADSPSPADRERRDVSPAANGR------SPSPRDD-- 300
Query: 252 PIDDDDNH 259
+D+ NH
Sbjct: 301 --EDNGNH 306
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/120 (85%), Positives = 110/120 (91%), Gaps = 1/120 (0%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K D+ FVEFS+PRDADDARY L+G+DVDGSRIIVEFARG PRGPGGSREYLGRGPPPGS
Sbjct: 70 LKHDYGFVEFSNPRDADDARYELDGQDVDGSRIIVEFARGTPRGPGGSREYLGRGPPPGS 129
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCGIDGHWARDC AGDWKNKCYRCGE+GHIE+NCQNSPK L R RSYSRSP P RG
Sbjct: 130 GRCFNCGIDGHWARDCNAGDWKNKCYRCGEKGHIEKNCQNSPKNLKRGRSYSRSPPPYRG 189
>gi|448878298|gb|AGE46112.1| arginine/serine-rich splicing factor R2SZ35 transcript I [Sorghum
bicolor]
Length = 312
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 175/285 (61%), Positives = 194/285 (68%), Gaps = 33/285 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFSDP DADDA+Y+L+GR+VDGSRIIVEFA+G PRG GGSREY+GRGPPPG+
Sbjct: 42 LKRDYAFIEFSDPHDADDAQYNLDGREVDGSRIIVEFAKGVPRGSGGSREYMGRGPPPGT 101
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSPSPRRG
Sbjct: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRG 161
Query: 120 RSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPK---RRRNSPPSSKGRKR 176
R RSRSYSR RS SRSRSP R R RS S S RR SP K R R
Sbjct: 162 RGRSRSYSRSRSYSRSRSPSGSPRGGRRERDERRSRSLSYSRSASPRRSVSPAKEKERSR 221
Query: 177 SP----TPDERSPQDQRSPSPRDRRQANGSEYSGSPRG-----KSRSPVDDADGPEDRNY 227
+P +P SP+D SP P+D NGS+ SP +SRSP D Y
Sbjct: 222 TPDGSRSPRSPSPRDDVSPPPKDNGAHNGSDREDSPGARENSKRSRSPSD--------GY 273
Query: 228 RSPPEENGRSRSRSLSPVPRDDRSPI-----DDDDNHGDPRGSES 267
RS P NGR SP PRDDRSP DD+ G PRGS+S
Sbjct: 274 RS-PAANGR------SPSPRDDRSPSPKGNNGDDERRGSPRGSQS 311
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea mays]
Length = 314
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 171/285 (60%), Positives = 195/285 (68%), Gaps = 33/285 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFSDPRDADDA+Y+L+GR+VDGSRIIVEFA+G PRG GGSREY+GRGPPPG+
Sbjct: 42 LKRDYAFIEFSDPRDADDAQYNLDGREVDGSRIIVEFAKGVPRGSGGSREYMGRGPPPGT 101
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCG+DGHWARDCKAGDWKNKCYRCGE GHIERNCQNSP+ L R +SYSRSPSPR G
Sbjct: 102 GRCFNCGMDGHWARDCKAGDWKNKCYRCGESGHIERNCQNSPRNLRRDKSYSRSPSPRGG 161
Query: 120 RSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPK---RRRNSPPSSKGRKR 176
R RSRSYSR RS SRSRSP R R RS S S RR SP K R R
Sbjct: 162 RGRSRSYSRSRSYSRSRSPSGSPRGGRRERDERRSRSLSYSRSASPRRSVSPAKEKERSR 221
Query: 177 SPT----PDERSPQDQRSPSPRDRRQANGSEYSGSPRG-----KSRSPVDDADGPEDRNY 227
+P P SP+ + SP +D NGS++ G+P G +SRSP D Y
Sbjct: 222 TPNGSRSPRSPSPRAEVSPPLKDNGARNGSDHEGNPGGGENSKRSRSPSD--------GY 273
Query: 228 RSPPEENGRSRSRSLSPVPRDDRSPI-----DDDDNHGDPRGSES 267
RS P NGR SP PRDDRSP +DD+ G PRGS+S
Sbjct: 274 RS-PVANGR------SPSPRDDRSPSPKGNNEDDERRGSPRGSQS 311
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/117 (85%), Positives = 111/117 (94%), Gaps = 3/117 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSRE--YLGRGPPP 58
+KRD+AF+E+SDPRDADDA+Y+L+GRDVDGSRIIVEFA+G PRGPGGSRE Y+GRGPPP
Sbjct: 42 LKRDYAFIEYSDPRDADDAQYNLDGRDVDGSRIIVEFAKGIPRGPGGSREREYMGRGPPP 101
Query: 59 GSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSP 114
G+GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSP
Sbjct: 102 GTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSLRRERSYSRSP 158
>gi|293337151|ref|NP_001168362.1| uncharacterized protein LOC100382130 [Zea mays]
gi|223945609|gb|ACN26888.1| unknown [Zea mays]
gi|223947765|gb|ACN27966.1| unknown [Zea mays]
gi|413950152|gb|AFW82801.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
Length = 315
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 175/292 (59%), Positives = 196/292 (67%), Gaps = 34/292 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFSDPRDADDA+Y+L+GRDVDGSRIIVEFA+G PRG GGSR+Y GRGPPPG+
Sbjct: 32 LKRDYAFIEFSDPRDADDAQYNLDGRDVDGSRIIVEFAKGVPRGSGGSRDYNGRGPPPGT 91
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR-PRSYSRSPSPRRG 119
GRCFNCG+DGHWARDC+AGDWKNKCYRCGERGHIERNCQNSP+ LR RSYSRSPSPRRG
Sbjct: 92 GRCFNCGVDGHWARDCQAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRG 151
Query: 120 RSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPK---RRRNSPPSSKGRKR 176
R RSRSYSR RS SRSRSP R R RS S S RR SP K R R
Sbjct: 152 RGRSRSYSRSRSYSRSRSPSGSPRGGRRDRDERRSRSLSYSRSASPRRSVSPVKEKERSR 211
Query: 177 SPTPDER-SPQDQRSPSPRDRRQANGSEYSGSPRGK-----SRSPVDDADGPEDRNYRSP 230
+P SP+D+ SP P+D NGS+ SP G+ SRSP D YRSP
Sbjct: 212 TPDGSRSPSPRDKVSPPPKDNGAHNGSDREDSPGGREMSKRSRSPSD--------GYRSP 263
Query: 231 PEENGRSRSRSLSPVPR--DDRSPI-------------DDDDNHGDPRGSES 267
NGRS SRS SP DD SP DD++ G PRGS+S
Sbjct: 264 -VGNGRSPSRSPSPKVNNGDDPSPKGNNGDDPSPKGNNGDDEHRGSPRGSQS 314
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 175/292 (59%), Positives = 196/292 (67%), Gaps = 34/292 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFSDPRDADDA+Y+L+GRDVDGSRIIVEFA+G PRG GGSR+Y GRGPPPG+
Sbjct: 42 LKRDYAFIEFSDPRDADDAQYNLDGRDVDGSRIIVEFAKGVPRGSGGSRDYNGRGPPPGT 101
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR-PRSYSRSPSPRRG 119
GRCFNCG+DGHWARDC+AGDWKNKCYRCGERGHIERNCQNSP+ LR RSYSRSPSPRRG
Sbjct: 102 GRCFNCGVDGHWARDCQAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRG 161
Query: 120 RSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPK---RRRNSPPSSKGRKR 176
R RSRSYSR RS SRSRSP R R RS S S RR SP K R R
Sbjct: 162 RGRSRSYSRSRSYSRSRSPSGSPRGGRRDRDERRSRSLSYSRSASPRRSVSPVKEKERSR 221
Query: 177 SPTPDER-SPQDQRSPSPRDRRQANGSEYSGSPRGK-----SRSPVDDADGPEDRNYRSP 230
+P SP+D+ SP P+D NGS+ SP G+ SRSP D YRSP
Sbjct: 222 TPDGSRSPSPRDKVSPPPKDNGAHNGSDREDSPGGREMSKRSRSPSD--------GYRSP 273
Query: 231 PEENGRSRSRSLSPVPR--DDRSPI-------------DDDDNHGDPRGSES 267
NGRS SRS SP DD SP DD++ G PRGS+S
Sbjct: 274 -VGNGRSPSRSPSPKVNNGDDPSPKGNNGDDPSPKGNNGDDEHRGSPRGSQS 324
>gi|115452341|ref|NP_001049771.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|108707560|gb|ABF95355.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548242|dbj|BAF11685.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|222624706|gb|EEE58838.1| hypothetical protein OsJ_10413 [Oryza sativa Japonica Group]
Length = 330
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/116 (85%), Positives = 110/116 (94%), Gaps = 2/116 (1%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP-GGSREYLGRGPPPG 59
+KRD+AF+EFSDPRDAD+ARY+L+GRDVDGSRI+VEFA+G PRG GGSREY+GRGPPPG
Sbjct: 42 LKRDYAFIEFSDPRDADEARYNLDGRDVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPG 101
Query: 60 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSP 114
+GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSP
Sbjct: 102 TGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSP 157
>gi|68035567|gb|AAY84873.1| alternative splicing regulator [Triticum aestivum]
Length = 333
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/117 (84%), Positives = 110/117 (94%), Gaps = 3/117 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSRE--YLGRGPPP 58
+KRD+AF+E+SDPRDAD+ARY+L+GRDVDGSRIIVEFA+G PRG GGSRE Y+GRGPPP
Sbjct: 42 LKRDYAFIEYSDPRDADEARYNLDGRDVDGSRIIVEFAKGVPRGSGGSREREYVGRGPPP 101
Query: 59 GSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSP 114
G+GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSP
Sbjct: 102 GTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSLRRERSYSRSP 158
>gi|222617767|gb|EEE53899.1| hypothetical protein OsJ_00434 [Oryza sativa Japonica Group]
Length = 377
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 160/307 (52%), Positives = 181/307 (58%), Gaps = 72/307 (23%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK +FAFVEFSD RDAD+ARY+L+GRD DGSR+IVEFA+G PRGPGGSREY+GRGPPPGS
Sbjct: 102 MKHEFAFVEFSDARDADEARYNLDGRDFDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGS 161
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY--------- 110
GRCFNCGIDGHWARDCKAGDWKN+CYRCG+RGHIER+C+NSPK L R RSY
Sbjct: 162 GRCFNCGIDGHWARDCKAGDWKNRCYRCGDRGHIERDCRNSPKNLKRGRSYSRSPSPRRG 221
Query: 111 ------------------------SRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRD-RSV 145
SR+ R SRS DSRS RD RS
Sbjct: 222 RSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGSPRDSRSP 281
Query: 146 ERFERRTRSP----RDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQANG 201
+ R T+SP RDSRSP RR SPP+ GR RSPTP+ RSP+PRD R
Sbjct: 282 KGSPRDTQSPRGSPRDSRSP-RRSASPPN--GRNRSPTPNA-----SRSPAPRDSRSPM- 332
Query: 202 SEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPIDDDDNH-G 260
R SRSP D E R+ + NGR SP PRD +D+ NH
Sbjct: 333 -------RADSRSPADH----ERRDMST--AANGR------SPSPRD----YEDNGNHRA 369
Query: 261 DPRGSES 267
PRGS S
Sbjct: 370 SPRGSAS 376
>gi|115434616|ref|NP_001042066.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|54290784|dbj|BAD61423.1| putative splicing factor [Oryza sativa Japonica Group]
gi|113531597|dbj|BAF03980.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|125524487|gb|EAY72601.1| hypothetical protein OsI_00466 [Oryza sativa Indica Group]
gi|215765664|dbj|BAG87361.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 160/307 (52%), Positives = 181/307 (58%), Gaps = 72/307 (23%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK +FAFVEFSD RDAD+ARY+L+GRD DGSR+IVEFA+G PRGPGGSREY+GRGPPPGS
Sbjct: 49 MKHEFAFVEFSDARDADEARYNLDGRDFDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGS 108
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY--------- 110
GRCFNCGIDGHWARDCKAGDWKN+CYRCG+RGHIER+C+NSPK L R RSY
Sbjct: 109 GRCFNCGIDGHWARDCKAGDWKNRCYRCGDRGHIERDCRNSPKNLKRGRSYSRSPSPRRG 168
Query: 111 ------------------------SRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRD-RSV 145
SR+ R SRS DSRS RD RS
Sbjct: 169 RSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGSPRDSRSP 228
Query: 146 ERFERRTRSP----RDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQANG 201
+ R T+SP RDSRSP RR SPP+ GR RSPTP+ RSP+PRD R
Sbjct: 229 KGSPRDTQSPRGSPRDSRSP-RRSASPPN--GRNRSPTPNA-----SRSPAPRDSRSPM- 279
Query: 202 SEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPIDDDDNH-G 260
R SRSP D E R+ + NGR SP PRD +D+ NH
Sbjct: 280 -------RADSRSPADH----ERRDMST--AANGR------SPSPRD----YEDNGNHRA 316
Query: 261 DPRGSES 267
PRGS S
Sbjct: 317 SPRGSAS 323
>gi|357129728|ref|XP_003566513.1| PREDICTED: uncharacterized protein LOC100839501 [Brachypodium
distachyon]
Length = 292
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 154/219 (70%), Gaps = 21/219 (9%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K D+ FVEFSDPRDADDARY L+GRD DGSRIIVEFA+G PRGPGGS Y+GR PPGS
Sbjct: 70 LKHDYGFVEFSDPRDADDARYELDGRDFDGSRIIVEFAKGTPRGPGGSFNYVGRSLPPGS 129
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRCFNCGI+GHWARDCKAG+WKNKCYRCGE GHIE+NCQNSPK L R YSRSPSP+RG
Sbjct: 130 GRCFNCGIEGHWARDCKAGNWKNKCYRCGEMGHIEKNCQNSPKNLKRGGRYSRSPSPQRG 189
Query: 120 RSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPT 179
RSRSRSYSRG R DR ERR S S SP RR++ PS G RSPT
Sbjct: 190 RSRSRSYSRGHKGYRD------DRGAGLKERRPIS--SSYSP--RRSASPS--GCNRSPT 237
Query: 180 PDERSPQDQRSPSPRDRRQANGSEYSGSPRGKSRSPVDD 218
+ S PR + + NGS +S RG S+SP D
Sbjct: 238 ------SNGMSHPPRKQAEGNGSHHSA--RGDSQSPAHD 268
>gi|226491636|ref|NP_001143694.1| uncharacterized protein LOC100276428 [Zea mays]
gi|195620112|gb|ACG31886.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878170|gb|AGE46048.1| arginine/serine-rich splicing factor RS2Z39 transcript VI [Zea
mays]
Length = 353
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 93/111 (83%), Positives = 104/111 (93%), Gaps = 1/111 (0%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFSD RDAD+ARY L+GRDVDGSRI+VEFA+G PRG GGSREY+GRGPPPG+
Sbjct: 42 LKRDYAFIEFSDHRDADEARYQLDGRDVDGSRIVVEFAKGVPRGSGGSREYMGRGPPPGT 101
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY 110
GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSY
Sbjct: 102 GRCFNCGVDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSLRRERSY 152
>gi|224035793|gb|ACN36972.1| unknown [Zea mays]
gi|413950156|gb|AFW82805.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878164|gb|AGE46045.1| arginine/serine-rich splicing factor RS2Z39 transcript III [Zea
mays]
gi|448878166|gb|AGE46046.1| arginine/serine-rich splicing factor RS2Z39 transcript IV [Zea
mays]
Length = 353
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/111 (83%), Positives = 104/111 (93%), Gaps = 1/111 (0%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFSD RDAD+ARY L+GRDVDGSRI+VEFA+G PRG GGSREY+GRGPPPG+
Sbjct: 42 LKRDYAFIEFSDHRDADEARYQLDGRDVDGSRIVVEFAKGVPRGSGGSREYMGRGPPPGT 101
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY 110
GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSY
Sbjct: 102 GRCFNCGVDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSLRRERSY 152
>gi|255644623|gb|ACU22814.1| unknown [Glycine max]
gi|255644635|gb|ACU22820.1| unknown [Glycine max]
gi|255644651|gb|ACU22828.1| unknown [Glycine max]
gi|255648053|gb|ACU24482.1| unknown [Glycine max]
Length = 167
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 102/109 (93%), Gaps = 3/109 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK DFAFV+FSDPRDADDARY+L+GRDVDGSRIIVEFA+G PRG SREYLGRGPPPGS
Sbjct: 42 MKNDFAFVDFSDPRDADDARYNLDGRDVDGSRIIVEFAKGAPRG---SREYLGRGPPPGS 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRS 109
GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNC+NSPKK+ ++
Sbjct: 99 GRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKIEHKA 147
>gi|195624410|gb|ACG34035.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878160|gb|AGE46043.1| arginine/serine-rich splicing factor RS2Z39 transcript I [Zea mays]
Length = 353
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/111 (82%), Positives = 103/111 (92%), Gaps = 1/111 (0%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRD+AF+EFSD RDAD+ARY L+GRDVDGSRI+VE A+G PRG GGSREY+GRGPPPG+
Sbjct: 42 LKRDYAFIEFSDHRDADEARYQLDGRDVDGSRIVVESAKGVPRGSGGSREYMGRGPPPGT 101
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY 110
GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSY
Sbjct: 102 GRCFNCGVDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSLRRERSY 152
>gi|413942177|gb|AFW74826.1| hypothetical protein ZEAMMB73_867689 [Zea mays]
Length = 285
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/257 (57%), Positives = 169/257 (65%), Gaps = 19/257 (7%)
Query: 8 VEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCG 67
+ + RDAD+ARY L+GRDVDGSRI+VEFA+G PRGPGGSREY+GRGPPPG+GRCFNCG
Sbjct: 1 MHLFEHRDADEARYQLDGRDVDGSRIVVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCG 60
Query: 68 IDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSY 126
+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ + R RSYSRSPSPRRGR RS SY
Sbjct: 61 MDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSVRRERSYSRSPSPRRGRGRSPSY 120
Query: 127 SRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPS----SKGRKRSPTPD- 181
SR RS SRSRS + R D RS + P +K ++RSPTP
Sbjct: 121 SRSRSRSRSRSYSRSRSLSGSPRGGRRDRDDRRSRSLSYSRSPMRSPPAKEKERSPTPGG 180
Query: 182 -----ERSPQDQ-RSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENG 235
RSPQDQ SP P+D NGS+ SPRG+ S RS P NG
Sbjct: 181 SRSPRSRSPQDQVMSPPPKDNGDRNGSDRGDSPRGRENSRSRSRSRSPSGGNRS-PAANG 239
Query: 236 RSRSRSLSPVPRDDRSP 252
R SP PR DR+P
Sbjct: 240 R------SPSPRGDRTP 250
>gi|149390510|gb|ABR25316.1| splicing factor [Oryza sativa Indica Group]
Length = 209
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/111 (83%), Positives = 104/111 (93%), Gaps = 1/111 (0%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK +FAFVEFSD RDAD+ARY+L+GRD DGSR+IVEFA+G PRGPGGSREY+GRGPPPGS
Sbjct: 49 MKHEFAFVEFSDARDADEARYNLDGRDFDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGS 108
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY 110
GRCFNCGIDGHWARDCKAGDWKN+CYRCG+RGHIER+C+NSPK L R RSY
Sbjct: 109 GRCFNCGIDGHWARDCKAGDWKNRCYRCGDRGHIERDCRNSPKNLKRGRSY 159
>gi|297741517|emb|CBI32649.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/158 (82%), Positives = 136/158 (86%), Gaps = 4/158 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR-EYLGRGPPPG 59
MK DFAFVEFSDPRDADDARY+LNGRD DGSRIIVEFA+GGPRG G EYLGRGPPPG
Sbjct: 1 MKHDFAFVEFSDPRDADDARYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPG 60
Query: 60 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSPS-P 116
SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+KL RSYSRSP
Sbjct: 61 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRKLSRHGRSYSRSPVRS 120
Query: 117 RRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRS 154
R GRSRSRSYS RS SRSRSP KRDRS+ER +R+ S
Sbjct: 121 RHGRSRSRSYSPSRSYSRSRSPPKRDRSIERDKRQQAS 158
>gi|297820078|ref|XP_002877922.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
gi|297323760|gb|EFH54181.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/275 (53%), Positives = 166/275 (60%), Gaps = 41/275 (14%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEFSDPRDADDARY L+GRD DGSRI VE +RG PRG SR+ RGPPPGS
Sbjct: 42 MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPRG---SRDNGSRGPPPGS 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPR---SYSRSPSPR 117
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSP + R SYSRSP
Sbjct: 99 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPV-- 156
Query: 118 RGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRD-SRSPKRRRNSPPSSKGRKR 176
+SRS R S SRS S + RR +S D SRSPK S S KGR +
Sbjct: 157 --KSRSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERS-LSPKGRDQ 213
Query: 177 SPTPDERSPQDQRSPSPRDRRQANGSEYSGSPR--GKSRSPVDDADGPEDRNYRSPPEEN 234
S +PD++ D GSEY GSP+ G R+ V P R SP N
Sbjct: 214 SLSPDQKVT---------DASPKRGSEYDGSPKENGNGRNSV----SPIVRGDESPVGLN 260
Query: 235 GRSRSRSLSPVPRDDRSPIDDDD--NHGDPRGSES 267
G+ DRSPIDD+ N P+GSES
Sbjct: 261 GQ------------DRSPIDDEAELNRPSPKGSES 283
>gi|30687109|ref|NP_850280.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|75331124|sp|Q8VYA5.1|RSZ33_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z33; AltName:
Full=RS-containing zinc finger protein 33;
Short=At-RS2Z33; Short=At-RSZ33
gi|18252179|gb|AAL61922.1| unknown protein [Arabidopsis thaliana]
gi|21386957|gb|AAM47882.1| unknown protein [Arabidopsis thaliana]
gi|51971244|dbj|BAD44314.1| unknown protein [Arabidopsis thaliana]
gi|330254293|gb|AEC09387.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 290
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 95/106 (89%), Gaps = 3/106 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEF DPRDADDAR+ L+GRD DGSRI VEF+RG PRG SR++ RGPPPG+
Sbjct: 42 MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPRG---SRDFDSRGPPPGA 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 106
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSPKKLR
Sbjct: 99 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLR 144
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 138/221 (62%), Gaps = 21/221 (9%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKR+F FVEF+DPRDADDAR+ L+GR DGS +IVEFARG RGPGG G+GP
Sbjct: 121 MKREFGFVEFTDPRDADDARHDLDGRIFDGSHLIVEFARGAQRGPGGV-PLDGKGPSF-P 178
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRC+NCG+DGHW RDCKAGDW++KC+RCGE GHIERNC+NS K L R RSY RS SP G
Sbjct: 179 GRCYNCGMDGHWVRDCKAGDWRDKCFRCGELGHIERNCKNSSKDLKRGRSYLRSASPHHG 238
Query: 120 RSRSRSYS--------RGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSS 171
+ R RSYS RGR S SRSP + RR RS SRS R NS
Sbjct: 239 KGRGRSYSRSLSPYLGRGRGRSYSRSP-------SHYHRRGRSWSYSRSHSPRNNSKAYG 291
Query: 172 KGRKRSPTPDERSPQDQRSPSPRDRRQAN-GSEYSGSPRGK 211
+ + + R P +RS P +R + N GS G RGK
Sbjct: 292 EELPSTRSGYSRGP--RRSSPPMERAECNGGSPMRGEARGK 330
>gi|42571093|ref|NP_973620.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|4056488|gb|AAC98054.1| unknown protein [Arabidopsis thaliana]
gi|330254292|gb|AEC09386.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 249
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 95/106 (89%), Gaps = 3/106 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEF DPRDADDAR+ L+GRD DGSRI VEF+RG PRG SR++ RGPPPG+
Sbjct: 1 MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPRG---SRDFDSRGPPPGA 57
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 106
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSPKKLR
Sbjct: 58 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLR 103
>gi|30693836|ref|NP_851015.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|20465265|gb|AAM19952.1| AT3g53500/F4P12_200 [Arabidopsis thaliana]
gi|24111329|gb|AAN46788.1| At3g53500/F4P12_200 [Arabidopsis thaliana]
gi|332645576|gb|AEE79097.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 243
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 166/275 (60%), Gaps = 41/275 (14%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEFSDPRDADDARY L+GRD DGSRI VE +RG PRG SR+ RGPPPGS
Sbjct: 1 MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPRG---SRDNGSRGPPPGS 57
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPR---SYSRSPSPR 117
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSP + R SYSRSP
Sbjct: 58 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPV-- 115
Query: 118 RGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRD-SRSPKRRRNSPPSSKGRKR 176
+SRS R S SRS S + RR +S D SRSPK S S KGR +
Sbjct: 116 --KSRSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERS-VSPKGRDQ 172
Query: 177 SPTPDERSPQDQRSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGR 236
S +PD + D GS+Y GSP+ ++ +G RN SP G
Sbjct: 173 SLSPDRKV---------IDASPKRGSDYDGSPK-------ENGNG---RNSASPIVGGGE 213
Query: 237 SRSRSLSPVPRD--DRSPIDDDDNHG--DPRGSES 267
SPV + DRSPIDD+ P+GSES
Sbjct: 214 ------SPVGLNGQDRSPIDDEAELSRPSPKGSES 242
>gi|30693839|ref|NP_190918.3| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75334513|sp|Q9FYB7.1|RSZ32_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z32; AltName:
Full=RS-containing zinc finger protein 32;
Short=At-RS2Z32; Short=At-RSZ32
gi|9795142|emb|CAB67657.2| splicing factor-like protein [Arabidopsis thaliana]
gi|222422875|dbj|BAH19424.1| AT3G53500 [Arabidopsis thaliana]
gi|332645577|gb|AEE79098.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 284
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 166/275 (60%), Gaps = 41/275 (14%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEFSDPRDADDARY L+GRD DGSRI VE +RG PRG SR+ RGPPPGS
Sbjct: 42 MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPRG---SRDNGSRGPPPGS 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPR---SYSRSPSPR 117
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSP + R SYSRSP
Sbjct: 99 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPV-- 156
Query: 118 RGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRD-SRSPKRRRNSPPSSKGRKR 176
+SRS R S SRS S + RR +S D SRSPK S S KGR +
Sbjct: 157 --KSRSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERS-VSPKGRDQ 213
Query: 177 SPTPDERSPQDQRSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGR 236
S +PD + D GS+Y GSP+ ++ +G RN SP G
Sbjct: 214 SLSPDRKVI---------DASPKRGSDYDGSPK-------ENGNG---RNSASPIVGGGE 254
Query: 237 SRSRSLSPVPRD--DRSPIDDDDNHG--DPRGSES 267
SPV + DRSPIDD+ P+GSES
Sbjct: 255 ------SPVGLNGQDRSPIDDEAELSRPSPKGSES 283
>gi|9843663|emb|CAC03605.1| splicing factor RSZ33 [Arabidopsis thaliana]
Length = 290
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/106 (80%), Positives = 94/106 (88%), Gaps = 3/106 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFVEF DPRDADDAR+ L+GRD DGSRI VEF+RG PRG SR++ RGPPPG+
Sbjct: 42 MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPRG---SRDFDSRGPPPGA 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 106
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+N PKKLR
Sbjct: 99 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNQPKKLR 144
>gi|116791032|gb|ABK25831.1| unknown [Picea sitchensis]
gi|224284468|gb|ACN39968.1| unknown [Picea sitchensis]
Length = 316
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/105 (87%), Positives = 98/105 (93%), Gaps = 2/105 (1%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG--SREYLGRGPPP 58
+K DFAF+EFSDPRDAD+ARY LNGRD+DGSRI+VEFARGGPRG G +REYLGRGPPP
Sbjct: 42 LKHDFAFIEFSDPRDADEARYYLNGRDLDGSRIVVEFARGGPRGAAGGRTREYLGRGPPP 101
Query: 59 GSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 103
GSGRCFNCG DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK
Sbjct: 102 GSGRCFNCGNDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 146
>gi|116788860|gb|ABK25029.1| unknown [Picea sitchensis]
Length = 316
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/105 (87%), Positives = 98/105 (93%), Gaps = 2/105 (1%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG--SREYLGRGPPP 58
+K DFAF+EFSDPRDAD+ARY LNGRD+DGSRI+VEFARGGPRG G +REYLGRGPPP
Sbjct: 42 LKHDFAFIEFSDPRDADEARYYLNGRDLDGSRIVVEFARGGPRGAAGGRTREYLGRGPPP 101
Query: 59 GSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 103
GSGRCFNCG DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK
Sbjct: 102 GSGRCFNCGNDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 146
>gi|51971529|dbj|BAD44429.1| unknown protein [Arabidopsis thaliana]
Length = 290
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/106 (80%), Positives = 94/106 (88%), Gaps = 3/106 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKRD+AFV F DPRDADDAR+ L+GRD DGSRI VEF+RG PRG SR++ RGPPPG+
Sbjct: 42 MKRDYAFVVFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPRG---SRDFDSRGPPPGA 98
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 106
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSPKKLR
Sbjct: 99 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLR 144
>gi|242089645|ref|XP_002440655.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
gi|241945940|gb|EES19085.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
Length = 241
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 110/147 (74%), Gaps = 12/147 (8%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KRDF FVEFSDPRDADDAR+ L+GR DGS IIVEFARG RGPGG + RGPP
Sbjct: 31 LKRDFGFVEFSDPRDADDARHDLDGRRFDGSYIIVEFARGARRGPGGVPLDV-RGPPF-P 88
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 119
GRC+NCG+DG W RDCKA DW+++C+RCGE GHIERNC+NSPK L R RSYSRSPSP G
Sbjct: 89 GRCYNCGMDG-WVRDCKADDWRDRCFRCGELGHIERNCKNSPKDLKRGRSYSRSPSPHHG 147
Query: 120 RSRSRSYS--------RGRSDSRSRSP 138
+ R RSYS RGR S SRSP
Sbjct: 148 KGRGRSYSKSLSPHHGRGRGRSYSRSP 174
>gi|42571091|ref|NP_973619.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|330254291|gb|AEC09385.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 260
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/106 (75%), Positives = 89/106 (83%), Gaps = 3/106 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+ F EF DPRDADDAR+ L+GRD DGSRI VEF+RG PRG SR++ RGPPPG+
Sbjct: 12 LSSHFRNQEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPRG---SRDFDSRGPPPGA 68
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 106
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSPKKLR
Sbjct: 69 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLR 114
>gi|448878405|gb|AGE46165.1| arginine/serine-rich splicing factor RS2Z37 transcript I
[Physcomitrella patens subsp. patens]
Length = 331
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/101 (78%), Positives = 93/101 (92%), Gaps = 1/101 (0%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP-GGSREYLGRGPPPG 59
+K DFAFVEF+D RDADDAR+ +NG+D DG+R+IVEFAR GPRG GG+REYLGRGPPPG
Sbjct: 74 VKHDFAFVEFADARDADDARHYVNGKDFDGNRLIVEFARRGPRGASGGAREYLGRGPPPG 133
Query: 60 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQN 100
+GRC+NCG DGHWARDCKAGDW++KCYRCG+RGHIERNC+N
Sbjct: 134 TGRCYNCGNDGHWARDCKAGDWRDKCYRCGQRGHIERNCRN 174
>gi|448878310|gb|AGE46118.1| arginine/serine-rich splicing factor RS2Z34 transcript V [Sorghum
bicolor]
Length = 227
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 129/179 (72%), Gaps = 22/179 (12%)
Query: 48 SREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-R 106
SREY+G+GPPPGSGRCFNCG+DGHWARDCKAGDWKN+CYRCG+RGHIER+CQNSPK L R
Sbjct: 33 SREYMGKGPPPGSGRCFNCGMDGHWARDCKAGDWKNRCYRCGDRGHIERDCQNSPKNLRR 92
Query: 107 PRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRR-- 164
RSYSRSPSPRR RS RSYSR RS SRS R S R RSPRDSRSP+R
Sbjct: 93 GRSYSRSPSPRRERSPVRSYSRSRSRGYSRSRSPRQNS-----RDERSPRDSRSPRRSPR 147
Query: 165 -----RNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSP-RGKSRSPVD 217
R SP SKGR RSP SP RSP+PR+R NGS+YS SP R SRSP D
Sbjct: 148 DSRSPRRSPSLSKGRDRSP-----SPNGSRSPAPRER---NGSDYSMSPRRDDSRSPAD 198
>gi|125550950|gb|EAY96659.1| hypothetical protein OsI_18573 [Oryza sativa Indica Group]
Length = 338
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 127/234 (54%), Gaps = 33/234 (14%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K ++ FVEFSDPRDA+DAR L+GR DGS IIV+FARG RG GGSR Y R P GS
Sbjct: 49 LKNEYGFVEFSDPRDANDARLDLDGRKYDGSDIIVQFARGVERGLGGSRGYKAR-PAHGS 107
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPR------------ 108
CFNCG++GHW R+C AGDW N+CY CGERGHI R C+NSPK L+
Sbjct: 108 DHCFNCGMEGHWHRNCTAGDWTNRCYGCGERGHILRECKNSPKDLKQERGYSRSRSPRRR 167
Query: 109 ---SYSRSPSPRRGRSR-----SRSYSRGRSDSRSRSPVKRDR-SVERFE--RRTRSPRD 157
SY +S P S R +SR SRSP + D S +R RR P +
Sbjct: 168 RSPSYGKSGPPSHWGSHGADREERLHSRRDGRGYSRSPRRHDSPSNQRNHSPRRYALPSN 227
Query: 158 SRSPKRRRNSPPSSKGRKRSPTPD--------ERSPQDQRSPSPRDRRQANGSE 203
R RR + P S GR RSP + D +PSPR+R NGS
Sbjct: 228 ERYDGTRRYASP-SYGRDRSPGGNALPANGRSHNLTSDGMNPSPRERDDQNGSH 280
>gi|115462263|ref|NP_001054731.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|46981336|gb|AAT07654.1| unknown protein [Oryza sativa Japonica Group]
gi|113578282|dbj|BAF16645.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|215693366|dbj|BAG88748.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768462|dbj|BAH00691.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630300|gb|EEE62432.1| hypothetical protein OsJ_17224 [Oryza sativa Japonica Group]
Length = 338
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 127/234 (54%), Gaps = 33/234 (14%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K ++ FVEFSDPRDA+DAR L+GR DGS IIV+FARG RG GGSR Y R P GS
Sbjct: 49 LKNEYGFVEFSDPRDANDARLDLDGRKYDGSDIIVQFARGVERGLGGSRGYKAR-PAHGS 107
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPR------------ 108
CFNCG++GHW R+C AGDW N+CY CGERGHI R C+NSPK L+
Sbjct: 108 DHCFNCGMEGHWHRNCTAGDWTNRCYGCGERGHILRECKNSPKDLKQERGYSRSRSPRRR 167
Query: 109 ---SYSRSPSPRRGRSR-----SRSYSRGRSDSRSRSPVKRDR-SVERFE--RRTRSPRD 157
SY +S P S R +SR SRSP + D S +R RR P +
Sbjct: 168 RSPSYGKSGPPSHWGSHGADREERLHSRRDGRGYSRSPRRHDSPSNQRNHSPRRYALPSN 227
Query: 158 SRSPKRRRNSPPSSKGRKRSPTPD--------ERSPQDQRSPSPRDRRQANGSE 203
R RR + P S GR RSP + D +PSPR+R NGS
Sbjct: 228 ERYDGTRRYASP-SYGRDRSPGGNALPANGRSHNLTSDGMNPSPRERDDQNGSH 280
>gi|215737382|dbj|BAG96311.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765749|dbj|BAG87446.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 231
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 136/223 (60%), Gaps = 26/223 (11%)
Query: 52 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY 110
+GRGPPPG+GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSY
Sbjct: 1 MGRGPPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSY 60
Query: 111 S----RSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRN 166
S R RS SRS SR RS SRSRS R E RR
Sbjct: 61 SCSPSPRRGRGRSRSYSRSRSRSRSYSRSRSRSLSGSPRARRELERSRSLSYSRSPRRSI 120
Query: 167 SPPSSKGRKRSPTPD----ERSPQDQRSPSPRDRRQANGSEYSGSPRGK--SRSPVDDAD 220
SP +++ +KRSPTPD RSPQDQ SP P+D + NGS++ SPRG+ SRSP D
Sbjct: 121 SPAANE-KKRSPTPDGSRSPRSPQDQVSPPPKDNAERNGSDHGDSPRGRENSRSPSD--- 176
Query: 221 GPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPIDDDDNHGDPR 263
YRSP NGR SP PR++ SP D+ PR
Sbjct: 177 -----GYRSPAAANGR------SPSPRNNGSPSPMDNGSRSPR 208
>gi|226494071|ref|NP_001140880.1| uncharacterized protein LOC100272956 [Zea mays]
gi|194701560|gb|ACF84864.1| unknown [Zea mays]
gi|413942178|gb|AFW74827.1| hypothetical protein ZEAMMB73_867689 [Zea mays]
gi|413942179|gb|AFW74828.1| hypothetical protein ZEAMMB73_867689 [Zea mays]
Length = 241
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 131/213 (61%), Gaps = 19/213 (8%)
Query: 52 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY 110
+GRGPPPG+GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ + R RSY
Sbjct: 1 MGRGPPPGTGRCFNCGMDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSVRRERSY 60
Query: 111 SRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPS 170
SRSPSPRRGR RS SYSR RS SRSRS + R D RS + P
Sbjct: 61 SRSPSPRRGRGRSPSYSRSRSRSRSRSYSRSRSLSGSPRGGRRDRDDRRSRSLSYSRSPM 120
Query: 171 ----SKGRKRSPTPD------ERSPQDQ-RSPSPRDRRQANGSEYSGSPRGKSRSPVDDA 219
+K ++RSPTP RSPQDQ SP P+D NGS+ SPRG+ S
Sbjct: 121 RSPPAKEKERSPTPGGSRSPRSRSPQDQVMSPPPKDNGDRNGSDRGDSPRGRENSRSRSR 180
Query: 220 DGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSP 252
RS P NGR SP PR DR+P
Sbjct: 181 SRSPSGGNRS-PAANGR------SPSPRGDRTP 206
>gi|238005718|gb|ACR33894.1| unknown [Zea mays]
gi|413942171|gb|AFW74820.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
Length = 222
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 130/234 (55%), Positives = 146/234 (62%), Gaps = 33/234 (14%)
Query: 52 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY 110
+GRGPPPG+GRCFNCG+DGHWARDCKAGDWKNKCYRCGE GHIERNCQNSP+ L R +SY
Sbjct: 1 MGRGPPPGTGRCFNCGMDGHWARDCKAGDWKNKCYRCGESGHIERNCQNSPRNLRRDKSY 60
Query: 111 SRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPK---RRRNS 167
SRSPSPR GR RSRSYSR RS SRSRSP R R RS S S RR S
Sbjct: 61 SRSPSPRGGRGRSRSYSRSRSYSRSRSPSGSPRGGRRERDERRSRSLSYSRSASPRRSVS 120
Query: 168 PPSSKGRKRSPT----PDERSPQDQRSPSPRDRRQANGSEYSGSPRG-----KSRSPVDD 218
P K R R+P P SP+ + SP +D NGS++ G+P G +SRSP D
Sbjct: 121 PAKEKERSRTPNGSRSPRSPSPRAEVSPPLKDNGARNGSDHEGNPGGGENSKRSRSPSD- 179
Query: 219 ADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPI-----DDDDNHGDPRGSES 267
YRS P NGR SP PRDDRSP +DD+ G PRGS+S
Sbjct: 180 -------GYRS-PVANGR------SPSPRDDRSPSPKGNNEDDERRGSPRGSQS 219
>gi|302788554|ref|XP_002976046.1| hypothetical protein SELMODRAFT_415978 [Selaginella moellendorffii]
gi|300156322|gb|EFJ22951.1| hypothetical protein SELMODRAFT_415978 [Selaginella moellendorffii]
Length = 386
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 76/97 (78%), Gaps = 10/97 (10%)
Query: 9 EFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG---------SREYLGRGPPPG 59
EFSDPRDAD+AR+ LNGRD +G R+IVEFAR GPR G RE L RGPPPG
Sbjct: 65 EFSDPRDADEARHYLNGRDFEGHRMIVEFARRGPRSGSGGSGGGSIRREREPL-RGPPPG 123
Query: 60 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIER 96
+GRC+NCG DGHWARDC+AGDWK+KCYRCG+RG ++R
Sbjct: 124 TGRCYNCGNDGHWARDCRAGDWKDKCYRCGQRGTLDR 160
>gi|302769814|ref|XP_002968326.1| hypothetical protein SELMODRAFT_409589 [Selaginella moellendorffii]
gi|300163970|gb|EFJ30580.1| hypothetical protein SELMODRAFT_409589 [Selaginella moellendorffii]
Length = 386
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 76/97 (78%), Gaps = 10/97 (10%)
Query: 9 EFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG---------SREYLGRGPPPG 59
EFSDPRDAD+AR+ LNGRD +G R+IVEFAR GPR G RE L RGPPPG
Sbjct: 65 EFSDPRDADEARHYLNGRDFEGHRMIVEFARRGPRSGSGGSGGGSIRREREPL-RGPPPG 123
Query: 60 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIER 96
+GRC+NCG DGHWARDC+AGDWK+KCYRCG+RG ++R
Sbjct: 124 TGRCYNCGNDGHWARDCRAGDWKDKCYRCGQRGTLDR 160
>gi|238010422|gb|ACR36246.1| unknown [Zea mays]
gi|413950157|gb|AFW82806.1| hypothetical protein ZEAMMB73_743489 [Zea mays]
Length = 261
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/55 (90%), Positives = 54/55 (98%)
Query: 52 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 106
+GRGPPPG+GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ LR
Sbjct: 1 MGRGPPPGTGRCFNCGVDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSLR 55
>gi|195624934|gb|ACG34297.1| hypothetical protein [Zea mays]
Length = 261
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/55 (90%), Positives = 54/55 (98%)
Query: 52 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 106
+GRGPPPG+GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ LR
Sbjct: 1 MGRGPPPGTGRCFNCGVDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSLR 55
>gi|222424795|dbj|BAH20350.1| AT2G37340 [Arabidopsis thaliana]
Length = 193
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/47 (91%), Positives = 46/47 (97%)
Query: 60 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 106
+GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSPKKLR
Sbjct: 1 AGRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLR 47
>gi|452822290|gb|EME29311.1| splicing factor, arginine/serine-rich 7 [Galdieria sulphuraria]
Length = 258
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 13/98 (13%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+ D+AFVE D RDA+DARY L+G+ ++G RI VEFA+ PP
Sbjct: 35 LLSDYAFVEMGDERDAEDARYYLDGKRLEGERIRVEFAKN-------------ERAPPRQ 81
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
+C+NCG+ GH+AR+C GDW N+CYRCGE+GH +++C
Sbjct: 82 PKCYNCGLLGHFARECPNGDWSNRCYRCGEKGHTQKDC 119
>gi|413918660|gb|AFW58592.1| hypothetical protein ZEAMMB73_952615 [Zea mays]
Length = 208
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 106/202 (52%), Gaps = 25/202 (12%)
Query: 24 NGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKN 83
+G GS+ ++ A RGPGG G+GP S RC+N G+DGHW RDCK+GDW++
Sbjct: 18 HGFATRGSKFVLTGALLAQRGPGGV-PLDGKGPSFPS-RCYNYGMDGHWVRDCKSGDWRD 75
Query: 84 KCYRCGERGHIERNCQNSPKKL-----RPRSYSRSPSPRRGRSRSRS--------YSRGR 130
+C+RCGE GHIERNC+NS K L R RSY RS SP G+ R RS RGR
Sbjct: 76 RCFRCGELGHIERNCKNSSKDLKYFLERGRSYLRSASPHHGKVRRRSYSRSLSPYLGRGR 135
Query: 131 SDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRS 190
S SRSP + RR RS S S R NS + + R P +RS
Sbjct: 136 GRSYSRSP-------SHYHRRGRSWSYSWSQSPRNNSKAYGEELPSIRSGYSRGP--RRS 186
Query: 191 PSPRDRRQAN-GSEYSGSPRGK 211
P +R + N GS G RGK
Sbjct: 187 SPPMERAECNGGSPMRGEARGK 208
>gi|413944556|gb|AFW77205.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 282
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKR+F FVEF+DPRDADDAR+ L+GR DGS +IVEFARG RGPGG G+GP
Sbjct: 121 MKREFGFVEFTDPRDADDARHDLDGRIFDGSHLIVEFARGAQRGPGGV-PLDGKGPSF-P 178
Query: 61 GRCFNCGIDGHWARD 75
GRC+NCG+DGHWA +
Sbjct: 179 GRCYNCGMDGHWAWE 193
>gi|146179448|ref|XP_001020597.2| hypothetical protein TTHERM_00219250 [Tetrahymena thermophila]
gi|146144570|gb|EAS00352.2| hypothetical protein TTHERM_00219250 [Tetrahymena thermophila
SB210]
Length = 256
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
+R FAF+E+S DA A ++G+ + +RI+V++ +R R P +
Sbjct: 45 QRGFAFIEYSSSSDAKQAVEDMDGQRFEDTRIVVQYKE--------NRSDRNRRGPSTAD 96
Query: 62 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
C+NCG GHWA +CK G+W N+CYRCG+ GH+++ C
Sbjct: 97 VCYNCGRKGHWANECKEGNWNNRCYRCGKSGHLKKEC 133
>gi|242089653|ref|XP_002440659.1| hypothetical protein SORBIDRAFT_09g004723 [Sorghum bicolor]
gi|241945944|gb|EES19089.1| hypothetical protein SORBIDRAFT_09g004723 [Sorghum bicolor]
Length = 123
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 16/86 (18%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K ++ FV DADDAR LNG++ +G+RI V+FA G PRGP S + L
Sbjct: 54 LKENYGFV------DADDARCELNGQEFNGNRISVKFATGVPRGPVDSAQIL-------- 99
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCY 86
C+NCG +GH++ DCKAGDWK++CY
Sbjct: 100 --CYNCGAEGHFSSDCKAGDWKDRCY 123
>gi|145539490|ref|XP_001455435.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423243|emb|CAK88038.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 23/120 (19%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSRE--YLGRGPPP 58
++ AF+EF DA A ++G+ + G RI V+ SR+ +LG P
Sbjct: 34 LRSTHAFIEFEGRDDAKKAISQMDGKRIGGDRITVK-----------SRDNRHLGANGPT 82
Query: 59 GSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRR 118
CFNCG GHWA DCK GD ++ CYRC ++GH+ ++C PK SR+PS R
Sbjct: 83 ARDVCFNCGRKGHWANDCKEGDLRDTCYRCYQKGHLRKDC---PK-------SRTPSVTR 132
>gi|281210715|gb|EFA84881.1| RNA-binding region RNP-1 domain-containing protein
[Polysphondylium pallidum PN500]
Length = 542
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 14/72 (19%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF+EF + RDADDA +LNG + GS+I VE+++GG + P +CF
Sbjct: 40 FAFIEFKERRDADDALKALNGAKLLGSKITVEWSKGGGKAP--------------DNKCF 85
Query: 65 NCGIDGHWARDC 76
C GHWA+DC
Sbjct: 86 TCQQSGHWAKDC 97
>gi|145512962|ref|XP_001442392.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409745|emb|CAK74995.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
++ AF+EF +A A ++GR + G R+ V+ P G G P
Sbjct: 34 LRSTHAFIEFEASDEAKQAISQVDGRRIGGDRVTVKQRDDRPSGVRG---------PTTR 84
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
CFNCG GHWA +CK GD + CYRC ++GHI++ C
Sbjct: 85 DVCFNCGRKGHWANECKEGDLRETCYRCYKKGHIKKEC 122
>gi|440803033|gb|ELR23947.1| hypothetical protein ACA1_075260 [Acanthamoeba castellanii str.
Neff]
Length = 178
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 20/80 (25%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP-G 59
MK +AF+E++D RDADDA ++G D+DG+RI VE P G
Sbjct: 37 MKAGYAFIEYNDSRDADDAVRGMDGNDLDGARISVE-------------------PSHRG 77
Query: 60 SGRCFNCGIDGHWARDCKAG 79
GRCF+CG +GHWARDC+ G
Sbjct: 78 EGRCFSCGKEGHWARDCREG 97
>gi|145549079|ref|XP_001460219.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428048|emb|CAK92822.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 21/120 (17%)
Query: 1 MKRDFAFVEFSDPRDADDARYSL-NGRDVDGS-RIIVEFARGGPRGPGGSREYLGRGPPP 58
++ AFVEF + DA A + N R +GS RI V+ P+G G P
Sbjct: 34 LRNTHAFVEFENGDDAKAAISKMDNKRLNEGSDRITVKPRDDRPQGARG---------PT 84
Query: 59 GSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRR 118
CFNCG GHWA +CK GD ++ CYRC ++GH+ ++C PK SRSPS +R
Sbjct: 85 SRDVCFNCGRKGHWANECKEGDLRDTCYRCYKKGHVRKDC---PK-------SRSPSEKR 134
>gi|324502984|gb|ADY41304.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 122
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 58
+K F FVEF DPRDADDA Y LNG+D+ G RII+EF+R GPRG G Y PPP
Sbjct: 34 LKNGFGFVEFDDPRDADDAVYELNGKDLCGERIILEFSRRGPRGRGMYDRY----PPP 87
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+AF++F D RDA+DA NGR+ G ++VE+A+G PR S++ C+
Sbjct: 46 YAFLDFEDHRDAEDALKEENGREYQGVSMVVEWAKGAPRRQQSSQQ--------AYDECY 97
Query: 65 NCGIDGHWARDCKAG 79
C GHWARDCK G
Sbjct: 98 KCHRSGHWARDCKEG 112
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARGGPRG
Sbjct: 273 LKNGYGFVEFEDYRDADDAVYELNGKDLAGERVIVEHARGGPRG 316
>gi|324536071|gb|ADY49444.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 92
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 58
+K F FVEF DPRDADDA Y LNG+D+ G RII+EF+R GPRG G Y PPP
Sbjct: 34 LKNGFGFVEFDDPRDADDAVYELNGKDLCGERIILEFSRRGPRGRGMYDRY----PPP 87
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSRE 50
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RGPGG RE
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGPGGRRE 84
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Metaseiulus occidentalis]
Length = 303
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG 47
+K FAFVEF D RDA+DA Y LNG+D+ G RI+VE A+G RG GG
Sbjct: 38 LKSGFAFVEFEDTRDAEDACYELNGKDLLGDRIVVEMAKGTERGRGG 84
>gi|170594581|ref|XP_001902042.1| Splicing factor, arginine/serine-rich 4 [Brugia malayi]
gi|158590986|gb|EDP29601.1| Splicing factor, arginine/serine-rich 4, putative [Brugia malayi]
Length = 347
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 7/61 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR---GPGGSREYLGRGPP 57
+K F FVEF DPRDADDA Y LNG+++ G R+I+EF+R GPR G GG R PP
Sbjct: 37 LKNGFGFVEFDDPRDADDAVYELNGKELCGERVILEFSRRGPRSRMGFGG----FDRFPP 92
Query: 58 P 58
P
Sbjct: 93 P 93
>gi|440792856|gb|ELR14064.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 239
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 14/77 (18%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+KR + FVE+ D RDA DA L+G V G+RI +E+A+G R +
Sbjct: 52 VKRGYGFVEYEDRRDAQDALRDLDGVSVLGTRIAIEWAKGARR--------------TDT 97
Query: 61 GRCFNCGIDGHWARDCK 77
CF CG +GHWARDCK
Sbjct: 98 DTCFRCGEEGHWARDCK 114
>gi|281201086|gb|EFA75300.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 305
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 24/108 (22%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K +AFVEF D + A+DA ++N D+DG RIIV+ + GG + S
Sbjct: 99 IKTGYAFVEFKDEKSANDAINAMNNTDLDGERIIVQKSHGGRKRT--------------S 144
Query: 61 GRCFNCGIDGHWARDC----------KAGDWKNKCYRCGERGHIERNC 98
C+ C GHWAR C G KCY C GHI R C
Sbjct: 145 DECYICRGRGHWARSCPRNNSSGSSGGRGSRDIKCYTCNGYGHIAREC 192
>gi|312088457|ref|XP_003145870.1| Sfrs5 protein [Loa loa]
Length = 370
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 7/61 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR---GPGGSREYLGRGPP 57
+K F FVEF DPRDADDA Y LNG+++ G R+I+EF+R GPR G GG R PP
Sbjct: 37 LKNGFGFVEFDDPRDADDAVYELNGKELCGERVILEFSRRGPRSRMGFGG----FDRFPP 92
Query: 58 P 58
P
Sbjct: 93 P 93
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 7/61 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR---GPGGSREYLGRGPP 57
+K F FVEF DPRDADDA Y LNG+++ G R+I+EF+R GPR G GG R PP
Sbjct: 37 LKNGFGFVEFDDPRDADDAVYELNGKELCGERVILEFSRRGPRSRMGFGG----FDRFPP 92
Query: 58 P 58
P
Sbjct: 93 P 93
>gi|156406725|ref|XP_001641195.1| predicted protein [Nematostella vectensis]
gi|156228333|gb|EDO49132.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG-PGGSREYLGRGPPPG 59
+K + F+E+ DPRDA++A N R + GSRI+VE+ R G RG P G G+ P
Sbjct: 37 LKTAYGFIEYEDPRDAEEAMRRENNRKLFGSRIVVEYVRSGERGKPVG-----GQTRPTV 91
Query: 60 SG-RCFNCGIDGHWARDC 76
G CF CG GHWA C
Sbjct: 92 VGDECFVCGKLGHWASSC 109
>gi|440804043|gb|ELR24926.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 263
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 11/76 (14%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K F FVE+ D RDA+DA L+G + G RI VE+A+G R G S
Sbjct: 13 VKVGFGFVEYEDRRDAEDAVRDLDGAHLMGKRIAVEWAKGERRATGTR-----------S 61
Query: 61 GRCFNCGIDGHWARDC 76
CF CG +GHWARDC
Sbjct: 62 DACFRCGEEGHWARDC 77
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 33/44 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
MK FAFVEF D RDADDA Y LNG+++ G RI VE ARG PRG
Sbjct: 34 MKNGFAFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRG 77
>gi|330800147|ref|XP_003288100.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
gi|325081861|gb|EGC35362.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
Length = 297
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 14/74 (18%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
R +AF+E+ + +DADDA +LNG + S+I VE+A+GG + +
Sbjct: 38 RCYAFIEYKEKKDADDALKALNGTTLLNSKISVEWAKGGKNAD--------------NNK 83
Query: 63 CFNCGIDGHWARDC 76
CF CG +GHW ++C
Sbjct: 84 CFACGQEGHWIKNC 97
>gi|224088599|ref|XP_002308491.1| predicted protein [Populus trichocarpa]
gi|222854467|gb|EEE92014.1| predicted protein [Populus trichocarpa]
Length = 117
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 83/138 (60%), Gaps = 29/138 (21%)
Query: 134 RSRSPV-KRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPS 192
RSRSP KR+RSVE E R+ SP P S+K RKRSPTPDE SP+ PS
Sbjct: 1 RSRSPPPKRERSVEN-ENRSLSP-----------EPKSTKARKRSPTPDEGSPR----PS 44
Query: 193 PRDRRQANGS--EYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDR 250
P+ R+ + EYSGSP G+SRS + P D YRS P+ NGRSR P PRDDR
Sbjct: 45 PKSRKLDDEQDREYSGSPTGRSRS---RSRSPRDERYRS-PQTNGRSR----IPSPRDDR 96
Query: 251 SPIDDD--DNHGDPRGSE 266
SP+DDD DN+ PR S+
Sbjct: 97 SPVDDDYEDNNRSPRDSD 114
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1
[Acyrthosiphon pisum]
Length = 309
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
MK +AFVEF D RDADDA Y LNGR+++G R+ VE ARG PRG
Sbjct: 36 MKNGYAFVEFDDYRDADDAVYELNGRELNGERVSVERARGTPRG 79
>gi|111226239|ref|XP_001134500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970421|gb|EAS66817.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 312
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 14/74 (18%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
R +AFVE+ + RDADDA +LNG + S+I VE+A+GG + +
Sbjct: 38 RCYAFVEYKERRDADDALKALNGTTLLNSKISVEWAKGGKNAD--------------NNK 83
Query: 63 CFNCGIDGHWARDC 76
CF CG +GHW + C
Sbjct: 84 CFACGQEGHWIKSC 97
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 33/44 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
MK FAFVEF D RDADDA Y LNG+++ G R+ VE ARG PRG
Sbjct: 34 MKNGFAFVEFDDYRDADDAVYELNGKELLGERVSVERARGTPRG 77
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 33/44 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
MK FAFVEF D RDADDA Y LNG+++ G R+ VE ARG PRG
Sbjct: 34 MKNGFAFVEFDDYRDADDAVYELNGKELLGERVSVERARGTPRG 77
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
+K F FVEF D RDADDA Y LNGR++DG R++VE A G R P
Sbjct: 33 LKNGFGFVEFDDYRDADDAVYELNGRELDGERVVVELAHGTARRP 77
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG 47
+K F FV F D RDADDA + LNG+ + G R+++E A+G PRGPGG
Sbjct: 36 LKNGFGFVIFDDERDADDAIHDLNGKSLCGERVMLEIAKGTPRGPGG 82
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG 47
+K F FV F D RDADDA + LNG+ + G R+++E A+G PRGPGG
Sbjct: 36 LKNGFGFVIFDDERDADDAIHDLNGKSLCGERVMLEIAKGTPRGPGG 82
>gi|221112062|ref|XP_002166415.1| PREDICTED: uncharacterized protein LOC100209098 [Hydra
magnipapillata]
Length = 257
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
F F+ F DPRDA+DA ++G+ + GSRI VE AR GGS RG + +C+
Sbjct: 40 FGFIIFEDPRDAEDAVREMDGKKICGSRIRVELARA---TTGGS-----RGRQIRNEKCY 91
Query: 65 NCGIDGHWARDCKA 78
NCG GH ++ C++
Sbjct: 92 NCGKTGHLSKQCRS 105
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K F FVEF DPRDADDA Y LNG+D+ G R+ VE ARG RG
Sbjct: 34 IKNGFGFVEFDDPRDADDAVYELNGKDLMGDRVSVELARGIRRG 77
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG 47
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RGP G
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGPSG 81
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K F FVEF DPRDADDA Y LNG+D+ G R+ VE ARG RG
Sbjct: 34 IKNGFGFVEFDDPRDADDAVYELNGKDLMGDRVSVELARGIRRG 77
>gi|198422993|ref|XP_002121806.1| PREDICTED: zinc finger (CCHC)-24 isoform 1 [Ciona intestinalis]
Length = 230
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 13/85 (15%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSRE-------------Y 51
FA+VEF DPRDADDA L+G+++ G RI VE + G PR G R+
Sbjct: 43 FAYVEFEDPRDADDAIKGLDGKELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGDGGG 102
Query: 52 LGRGPPPGSGRCFNCGIDGHWARDC 76
R S RC+NCG GH+A DC
Sbjct: 103 GSRRAFHPSDRCYNCGETGHYAYDC 127
>gi|291244600|ref|XP_002742185.1| PREDICTED: alternative splicing factor SRp20/9G8, putative-like
[Saccoglossus kowalevskii]
Length = 275
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+AFV++ D RDA+DA NGR+V G I+VE+AR GPR RG C+
Sbjct: 46 YAFVDYEDRRDAEDAIKYENGREVCGQSIVVEWAR-GPR----------RGFVQAEDECY 94
Query: 65 NCGIDGHWARDCK 77
C GHWARDC+
Sbjct: 95 KCHRSGHWARDCR 107
>gi|328871249|gb|EGG19620.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 299
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 33/123 (26%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MK FAFVEF + + A+ A ++G++VDG ++IV+ + GG + S
Sbjct: 91 MKAGFAFVEFDNEKSANQAIDEMDGKEVDGEKLIVQKSHGGRK--------------RSS 136
Query: 61 GRCFNCGIDGHWARDCKAGDWKN-------------------KCYRCGERGHIERNCQNS 101
C+ C GHWAR+C GD KCY C GHI R+C++S
Sbjct: 137 DECYLCRGRGHWARNCPRGDRDRDNRGGGRGGGRDNDRTRDIKCYNCNGYGHIARDCRSS 196
Query: 102 PKK 104
++
Sbjct: 197 SRR 199
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG 47
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RGP G
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGPSG 81
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K F FVEF DPRDADDA Y LNG+D+ G R+I+E ARG
Sbjct: 34 LKNGFGFVEFDDPRDADDAVYELNGKDLCGERVIIEHARG 73
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 13/85 (15%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSRE-------------Y 51
FA+VEF DPRDADDA L+G+++ G RI VE + G PR G R+
Sbjct: 51 FAYVEFEDPRDADDAIKGLDGKELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGDGGG 110
Query: 52 LGRGPPPGSGRCFNCGIDGHWARDC 76
R S RC+NCG GH+A DC
Sbjct: 111 GSRRAFHPSDRCYNCGETGHYAYDC 135
>gi|346468811|gb|AEO34250.1| hypothetical protein [Amblyomma maculatum]
Length = 161
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 22/115 (19%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP--GGSREYLGRGPPPGSGR 62
FAFVEF D RDA DA +L+G+ + G R+ VE + G R G SR P + R
Sbjct: 59 FAFVEFEDARDARDAVRALDGKMLCGRRVRVELSTGKSRNSYRGSSR------PFQPTDR 112
Query: 63 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPR 117
C++CG GH+ARDC+ + RN SP R RS S+SPS R
Sbjct: 113 CYDCGERGHYARDCRV--------------YSRRNSSRSPIGKRGRSGSKSPSRR 153
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+I+E ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIIEHARG 72
>gi|239790646|dbj|BAH71871.1| ACYPI003349 [Acyrthosiphon pisum]
Length = 160
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
MK +AFVEF D RDADDA Y LNGR+++G R+ VE ARG PRG
Sbjct: 36 MKNGYAFVEFDDYRDADDAVYELNGRELNGERVSVERARGTPRG 79
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|338721826|ref|XP_001500325.3| PREDICTED: serine/arginine-rich splicing factor 4 [Equus
caballus]
Length = 497
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 29 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 68
>gi|347972229|ref|XP_003436863.1| AGAP004592-PD [Anopheles gambiae str. PEST]
gi|333469347|gb|EGK97258.1| AGAP004592-PD [Anopheles gambiae str. PEST]
Length = 138
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG 47
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RGP G
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGPSG 81
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 43/72 (59%), Gaps = 10/72 (13%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG------GSREYLGR 54
+K F FVEF D RDADDA LNG+++ G R+ VE A G RGPG GSR++
Sbjct: 34 LKNGFGFVEFEDHRDADDAIKDLNGKELLGERVSVELAHGSRRGPGGRIVAPGSRDW--- 90
Query: 55 GPPPGSGRCFNC 66
PPG GR FN
Sbjct: 91 RSPPGGGR-FNA 101
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2
[Takifugu rubripes]
Length = 374
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 13/76 (17%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPP-PG 59
+K + FVEF DPRDADDA Y LNG+++ G R+IVE + GPR GG Y GR P PG
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTK-GPRRDGG---YSGRSKPRPG 88
Query: 60 SGRCFNCGIDGHWARD 75
G W RD
Sbjct: 89 GY--------GRWGRD 96
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Monodelphis domestica]
Length = 491
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|347972235|ref|XP_003436866.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|347972237|ref|XP_003436867.1| AGAP004592-PF [Anopheles gambiae str. PEST]
gi|333469345|gb|EGK97256.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|333469349|gb|EGK97260.1| AGAP004592-PF [Anopheles gambiae str. PEST]
Length = 149
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG 47
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RGP G
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGPSG 81
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|355557751|gb|EHH14531.1| hypothetical protein EGK_00474, partial [Macaca mulatta]
Length = 477
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 16 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 55
>gi|449274552|gb|EMC83653.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 197
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P + RC+
Sbjct: 40 FAFVEFEDPRDAEDAVLGLDGKIICGSRVRVEVSTGMPRRSRYDRP-PARRPFDPNDRCY 98
Query: 65 NCGIDGHWARDC 76
CG GH+A DC
Sbjct: 99 ECGEKGHYAYDC 110
>gi|347972231|ref|XP_003436864.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|347972233|ref|XP_003436865.1| AGAP004592-PG [Anopheles gambiae str. PEST]
gi|333469346|gb|EGK97257.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|333469350|gb|EGK97261.1| AGAP004592-PG [Anopheles gambiae str. PEST]
Length = 132
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG 47
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RGP G
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGPSG 81
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 27 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 66
>gi|242002226|ref|XP_002435756.1| RSZp22 protein, putative [Ixodes scapularis]
gi|215499092|gb|EEC08586.1| RSZp22 protein, putative [Ixodes scapularis]
Length = 199
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP--GGSREYLGRGPPPGSGR 62
FAFVEF DPRDA DA +L+G+ + G R+ VE + G R G SR P + R
Sbjct: 50 FAFVEFEDPRDARDAVRALDGKMLCGRRVRVELSTGKSRNSYRGSSR------PFQPTDR 103
Query: 63 CFNCGIDGHWARDCKA 78
C++CG GH+ARDC+
Sbjct: 104 CYDCGERGHYARDCRV 119
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|363742346|ref|XP_417747.3| PREDICTED: serine/arginine-rich splicing factor 4 [Gallus gallus]
Length = 214
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
+ FVEF D RDADDA Y LNG+D+ G R+IVE AR GPRG G
Sbjct: 4 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR-GPRGYG 44
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1
[Nomascus leucogenys]
Length = 494
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K F FVEF D RDADDA Y LNG+++ G R+I+E ARG RG
Sbjct: 35 LKNGFGFVEFEDYRDADDAVYELNGKELVGERVIIEHARGPARG 78
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|325303436|tpg|DAA34137.1| TPA_exp: alternative splicing factor SRp20/9G8 [Amblyomma
variegatum]
Length = 192
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP--GGSREYLGRGPPPGSGR 62
FAFVEF DPRDA DA +L+G+ + G R+ VE + G R G SR P + R
Sbjct: 50 FAFVEFEDPRDARDAVRALDGKMLCGRRVRVELSTGKSRNSYRGSSR------PFQPTDR 103
Query: 63 CFNCGIDGHWARDCKA 78
C++CG GH+ARDC+
Sbjct: 104 CYDCGERGHYARDCRV 119
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K F FVEF D RDADDA Y LNG+++ G R+I+E ARG RG
Sbjct: 73 LKNGFGFVEFEDYRDADDAVYELNGKELVGERVIIEHARGPARG 116
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 45/80 (56%), Gaps = 14/80 (17%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS---- 60
FAFVEF D RDA+DA L+GR + G R VE + G GS Y RGPPP S
Sbjct: 46 FAFVEFEDARDAEDAIRGLDGRTICGRRARVEMS----NGKSGSGRY--RGPPPRSRGRP 99
Query: 61 ----GRCFNCGIDGHWARDC 76
RC+ CG GH+ARDC
Sbjct: 100 FHPDDRCYECGDRGHYARDC 119
>gi|322787527|gb|EFZ13615.1| hypothetical protein SINV_15244 [Solenopsis invicta]
Length = 128
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG-GPRGPGGSREYLGRGPPPGSGRC 63
FAFVEF DPRDA+DA L+GR V G RI VE + G R G R +GR P +C
Sbjct: 48 FAFVEFEDPRDAEDAVRGLDGRIVCGRRIRVELSNGKKLRDRGFPRRGVGR-PFHPEDKC 106
Query: 64 FNCGIDGHWARDC 76
+ CG GH+ARDC
Sbjct: 107 YECGERGHYARDC 119
>gi|449488807|ref|XP_002189002.2| PREDICTED: serine/arginine-rich splicing factor 4 [Taeniopygia
guttata]
Length = 446
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 41
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 45/80 (56%), Gaps = 14/80 (17%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS---- 60
FAFVEF D RDA+DA L+GR + G R VE + G GS Y RGPPP S
Sbjct: 46 FAFVEFEDARDAEDAIRGLDGRTICGRRARVEMS----NGKSGSGRY--RGPPPRSRGRP 99
Query: 61 ----GRCFNCGIDGHWARDC 76
RC+ CG GH+ARDC
Sbjct: 100 FHPDDRCYECGDRGHYARDC 119
>gi|221220302|gb|ACM08812.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 256
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVE+ DPRDA+DA ++G+ + GSRI VE + G R R P + RC+
Sbjct: 53 FAFVEYEDPRDAEDATKGMDGKVLCGSRIRVELSTGMSRKSRYGRPSRRHFDP--NDRCY 110
Query: 65 NCGIDGHWARDC 76
CG GH+A DC
Sbjct: 111 QCGESGHYAYDC 122
>gi|21749793|dbj|BAC03661.1| unnamed protein product [Homo sapiens]
Length = 137
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFD 101
Query: 60 -SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 102 PNDRCYECGEKGHYAYDC 119
>gi|148706561|gb|EDL38508.1| mCG17902, isoform CRA_g [Mus musculus]
Length = 165
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 77 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFD 129
Query: 60 -SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 130 PNDRCYECGEKGHYAYDC 147
>gi|320169407|gb|EFW46306.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 200
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
F FVEF D RDA+DA NGR+V G RI VE+A+G R S CF
Sbjct: 40 FGFVEFEDRRDAEDALNRENGRNVRGVRIAVEWAKGQNRS-------------ADSDSCF 86
Query: 65 NCGIDGHWARDC 76
C GHWA+DC
Sbjct: 87 RCNKPGHWAKDC 98
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG-PRGPGGSREYLGRGPPPGSGRC 63
FAFVEF DPRDA+DA L+GR + G R VE + G R G R R P RC
Sbjct: 46 FAFVEFEDPRDAEDAVRGLDGRTICGRRARVELSNGKRLRDRGSMRRGAVRSYHP-EDRC 104
Query: 64 FNCGIDGHWARDC 76
+ CG GH+ARDC
Sbjct: 105 YECGERGHYARDC 117
>gi|345793997|ref|XP_865416.2| PREDICTED: serine/arginine-rich splicing factor 4 isoform 3
[Canis lupus familiaris]
Length = 469
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 2 LTEAYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 41
>gi|119620768|gb|EAX00363.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_a [Homo
sapiens]
gi|148706558|gb|EDL38505.1| mCG17902, isoform CRA_d [Mus musculus]
gi|149050600|gb|EDM02773.1| rCG61762, isoform CRA_b [Rattus norvegicus]
Length = 137
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFD 101
Query: 60 -SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 102 PNDRCYECGEKGHYAYDC 119
>gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 37 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|324507194|gb|ADY43052.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 360
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
MK +AFVEF+D RDADDA LNGR + G R+IVE A+ PRG
Sbjct: 34 MKNGYAFVEFTDYRDADDAVRDLNGRSLFGDRVIVELAKSRPRG 77
>gi|148706565|gb|EDL38512.1| mCG17902, isoform CRA_k [Mus musculus]
Length = 165
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 57 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFD 109
Query: 60 -SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 110 PNDRCYECGEKGHYAYDC 127
>gi|281350478|gb|EFB26062.1| hypothetical protein PANDA_013342 [Ailuropoda melanoleuca]
Length = 120
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 40 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFD 92
Query: 60 -SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 93 PNDRCYECGEKGHYAYDC 110
>gi|20071765|gb|AAH27391.1| Sfrs7 protein [Mus musculus]
gi|148706560|gb|EDL38507.1| mCG17902, isoform CRA_f [Mus musculus]
Length = 157
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFD 101
Query: 60 -SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 102 PNDRCYECGEKGHYAYDC 119
>gi|26328639|dbj|BAC28058.1| unnamed protein product [Mus musculus]
Length = 157
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFD 101
Query: 60 -SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 102 PNDRCYECGEKGHYAYDC 119
>gi|37728011|gb|AAR02376.1| gag protein [Simian immunodeficiency virus]
Length = 510
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 31 SRIIVEFARGGPRGPGGSREYLGRGPPP--GSGRCFNCGIDGHWARDCKAGDWKNKCYRC 88
SRI+ E A G RGPP G +CFNCG GH A++CKA + KCY C
Sbjct: 364 SRILAE-AMAGAIANMPMNMVQARGPPQRKGQPKCFNCGKFGHMAKNCKAPQ-RRKCYNC 421
Query: 89 GERGHIERNCQNSPKKLRPRSYSRSP-SPRRG 119
G+ GH+ ++C PK+ + ++ +P P++G
Sbjct: 422 GQPGHLAKDCPQPPKQNKGVNFLGNPFGPKKG 453
>gi|68534386|gb|AAH99175.1| Splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|149050598|gb|EDM02771.1| rCG61762, isoform CRA_a [Rattus norvegicus]
gi|149050599|gb|EDM02772.1| rCG61762, isoform CRA_a [Rattus norvegicus]
Length = 157
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFD 101
Query: 60 -SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 102 PNDRCYECGEKGHYAYDC 119
>gi|340504267|gb|EGR30725.1| splicing arginine serine-rich 6, putative [Ichthyophthirius
multifiliis]
Length = 371
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 16/97 (16%)
Query: 4 DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRC 63
++ F+EF D RDA DA N + G ++ +EF G GG R+ L C
Sbjct: 35 NYGFIEFEDQRDAKDALEECNNLEFKGKQLRIEF------GHGGRRKRL--------QNC 80
Query: 64 FNCGIDGHWARDC--KAGDWKNKCYRCGERGHIERNC 98
+ CG + H +DC K GD K KCY+CG H ++C
Sbjct: 81 YYCGRNNHNMKDCRKKYGDGKPKCYKCGSINHKFKDC 117
>gi|242012605|ref|XP_002427020.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511265|gb|EEB14282.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 403
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP--GGSREYLGR-GPP 57
+K + FVEF D RDADDA Y LNG+D+ G R+ VE ARG PRG R+ GR GPP
Sbjct: 35 IKNGYGFVEFDDYRDADDAVYELNGKDLLGERVSVERARGTPRGSDRWKDRDRYGRFGPP 94
Query: 58 P 58
P
Sbjct: 95 P 95
>gi|119628062|gb|EAX07657.1| splicing factor, arginine/serine-rich 4, isoform CRA_a [Homo
sapiens]
Length = 484
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 27 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 62
>gi|49887107|gb|AAT68794.1| gag protein [Simian immunodeficiency virus]
Length = 535
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 57 PPGS---GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 103
PPGS RCFNCG GH +DCK K KC++CG+ GHI +NC +P+
Sbjct: 414 PPGSRRQIRCFNCGQIGHLQKDCKRPR-KTKCFKCGQEGHIAKNCGQTPR 462
>gi|417407851|gb|JAA50519.1| Putative splicing factor arginine/serine-rich 7 35kda isoform cra
b, partial [Desmodus rotundus]
Length = 123
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 40 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFD 92
Query: 60 -SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 93 PNDRCYECGEKGHYAYDC 110
>gi|66809897|ref|XP_638672.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60467278|gb|EAL65311.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 365
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+++ F F+E+ D ADDA S + ++ G IIVE + S + + R P S
Sbjct: 33 LRKGFCFIEYFDKASADDAINSEHKQNFLGRNIIVELS--------NSSKGIKR-PDSSS 83
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCY 86
G+CF C +GHWAR C G KN Y
Sbjct: 84 GKCFMCNEEGHWARSCPNGGKKNSRY 109
>gi|148223523|ref|NP_001086618.1| MGC78845 protein [Xenopus laevis]
gi|50603914|gb|AAH77185.1| MGC78845 protein [Xenopus laevis]
Length = 224
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF D RDA+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 49 FAFVEFEDTRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRYDR-------PPARRPFD 101
Query: 60 -SGRCFNCGIDGHWARDCK 77
S RC+ CG GH+A DC+
Sbjct: 102 PSDRCYECGEKGHYAYDCQ 120
>gi|354472339|ref|XP_003498397.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Cricetulus griseus]
Length = 476
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 22 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 57
>gi|221221656|gb|ACM09489.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 272
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVE+ DPRDA+DA ++G+ + G+RI VE + G R R P + RC+
Sbjct: 53 FAFVEYEDPRDAEDATKGMDGKVLCGARIRVELSTGMSRKSRHDRPSRRHFDP--NDRCY 110
Query: 65 NCGIDGHWARDC 76
CG +GH+A DC
Sbjct: 111 QCGENGHYAYDC 122
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G RI VE ARG PRG
Sbjct: 88 IKNGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRG 131
>gi|427784005|gb|JAA57454.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 181
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+AFV++ D RDA+DA NGR++ G ++VE+ARG P ++ +G C+
Sbjct: 44 YAFVDYEDHRDAEDAVKYENGREIRGQSVVVEWARGPSFRPSAGKDRMG---YQSFDECY 100
Query: 65 NCGIDGHWARDC 76
C GHWARDC
Sbjct: 101 RCRRTGHWARDC 112
>gi|119620769|gb|EAX00364.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_b [Homo
sapiens]
Length = 132
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 13/78 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFD 101
Query: 60 -SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 102 PNDRCYECGEKGHYAYDC 119
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G RI VE ARG PRG
Sbjct: 88 IKNGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRG 131
>gi|417410943|gb|JAA51935.1| Putative serine/arginine-rich splicing factor 4, partial
[Desmodus rotundus]
Length = 467
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 1 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 36
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|426222714|ref|XP_004005530.1| PREDICTED: uncharacterized protein LOC101109078 [Ovis aries]
Length = 437
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 23 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 58
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
+K + FVEF DPRDADDA Y LNG+D+ G R+IVE G R GG+R
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKDLCGKRVIVEHTI-GQRRDGGNR 80
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G RI VE ARG PRG
Sbjct: 88 IKNGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRG 131
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
+K + FVEF D RDADDA Y LNG+D+ G R++VE A+G P
Sbjct: 34 LKNGYGFVEFEDYRDADDAVYELNGKDLMGDRVLVEHAKGTP 75
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like
[Monodelphis domestica]
Length = 340
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGSARG 78
>gi|209155708|gb|ACI34086.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 129
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF D RDA+DA L+G+ + GSR+ VE + G PR R R P + +C+
Sbjct: 49 FAFVEFEDTRDAEDAVRGLDGKLISGSRVRVELSTGMPRRSRYERAPTNR-PFDSNDKCY 107
Query: 65 NCGIDGHWARDCK 77
CG GH+A DC
Sbjct: 108 ECGERGHYAYDCH 120
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG-GPRGPGGSREYLGRGPPPGSGRC 63
FAFVEF DPRDA+DA L+GR + G R+ VE + G R G R GR P +C
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGRTLCGRRVRVELSNGKKLRDRGSFRRGSGR-PFHPEDKC 107
Query: 64 FNCGIDGHWARDC 76
+ CG GH+ARDC
Sbjct: 108 YECGERGHYARDC 120
>gi|221219336|gb|ACM08329.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 266
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVE+ DPRDA+DA ++G+ + G+RI VE + G R R P + RC+
Sbjct: 53 FAFVEYEDPRDAEDATKGMDGKVLCGARIRVELSTGMSRKSRHDRPSRRHFDP--NDRCY 110
Query: 65 NCGIDGHWARDC 76
CG +GH+A DC
Sbjct: 111 QCGENGHYAYDC 122
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2
[Oryzias latipes]
Length = 373
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
MK + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 MKNGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHARG 72
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1
[Oryzias latipes]
Length = 367
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
MK + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 MKNGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHARG 72
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSRE 50
+KR + FVEF D RDA+DA + LNGRD+ G R++VEF++ G R GG R+
Sbjct: 33 LKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSK-GRRSEGGGRD 81
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHARG 72
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus
rotundus]
Length = 345
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 41/72 (56%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF D RDA+DA L+GR + G R VE + G SR GR P RC+
Sbjct: 52 FAFVEFEDARDAEDAVRGLDGRTICGRRARVELSTGKSARGYRSRGGRGRSPGRREDRCY 111
Query: 65 NCGIDGHWARDC 76
CG GH+ARDC
Sbjct: 112 ECGNRGHFARDC 123
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|221220242|gb|ACM08782.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 260
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVE+ DPRDA+DA ++G+ + G+RI VE + G R R P + RC+
Sbjct: 53 FAFVEYEDPRDAEDATKGMDGKVLCGARIRVELSTGMSRKSRHDRPSRRHFDP--NDRCY 110
Query: 65 NCGIDGHWARDC 76
CG +GH+A DC
Sbjct: 111 QCGENGHYAYDC 122
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|281210217|gb|EFA84385.1| CCHC-type Zn finger-containing protein [Polysphondylium pallidum
PN500]
Length = 274
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 14/78 (17%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE--FARGGPRGPGGSREYLGRGPPP 58
MK+ F F+E+S AD+A S + + G I+VE + G R P P
Sbjct: 33 MKKGFCFIEYSSRDAADEAINSSHRTNFLGRSIVVEKSHSNGAKR------------PVP 80
Query: 59 GSGRCFNCGIDGHWARDC 76
G GRCF+C +GHWA++C
Sbjct: 81 GEGRCFHCHQEGHWAKEC 98
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|432889402|ref|XP_004075259.1| PREDICTED: uncharacterized protein LOC101155211 [Oryzias latipes]
Length = 251
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA ++G+ + GSR+ VE + G R R L R + +C+
Sbjct: 54 FAFVEFEDPRDAEDAVKGMDGKLLCGSRVRVEMSTGLSRK---GRGRLSRRQFDPNDKCY 110
Query: 65 NCGIDGHWARDC 76
CG GH+A DC
Sbjct: 111 QCGDRGHYAYDC 122
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
+K + FVEF D RDA+DA + LNG+ + G RI VE ARG RGPG
Sbjct: 34 LKNGYGFVEFDDYRDAEDAVHDLNGKKLMGERISVELARGIRRGPG 79
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG RG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARG 78
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDTRDADDAVYELNGKELCGERVIVEHARG 72
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF DPRDADDA Y LNG+++ G R+IVE +G
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKG 72
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ FVEF DPRDADDA Y LNG+++ G R+IVE +G
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKG 1244
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu
rubripes]
Length = 379
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHARG 72
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
+K F FVEF D RDADDA Y LNG+++ G R+ VE ARG RG
Sbjct: 34 IKNGFGFVEFDDHRDADDAVYELNGKELLGDRVSVELARGIRRGA 78
>gi|241671135|ref|XP_002399999.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
gi|215506237|gb|EEC15731.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
Length = 122
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+AFV++ D RDA+DA NGR++ G ++VE+ARG P ++ C+
Sbjct: 44 YAFVDYEDHRDAEDAVKYENGREIRGQSVVVEWARGPSFRPPAAK-------VSSFDECY 96
Query: 65 NCGIDGHWARDCKAGD 80
C GHWARDC GD
Sbjct: 97 RCRRTGHWARDCPEGD 112
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDA+DA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDAEDAVYELNGKDLCGERVIVEHARG 72
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Oreochromis niloticus]
Length = 342
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+++E ARG
Sbjct: 33 LKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARG 72
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|242012315|ref|XP_002426878.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511107|gb|EEB14140.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 192
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 47/95 (49%), Gaps = 21/95 (22%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDADDA L+GR + G R+ VE + G R G R RG P
Sbjct: 49 FAFVEFEDPRDADDAVRGLDGRSIAGRRVRVEPSNGMARRRGRDRGVSRRGRPFHP---- 104
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
++CY+CGERGH R+C+
Sbjct: 105 -----------------DDRCYQCGERGHYARDCK 122
>gi|47224788|emb|CAG06358.1| unnamed protein product [Tetraodon nigroviridis]
Length = 226
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 13/77 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA ++G+ + GSR+ VE + G R GRG P
Sbjct: 52 FAFVEFEDPRDAEDAVKGMDGKLLCGSRVRVEMSTGLSRK--------GRGRPSRRQFDP 103
Query: 60 SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 104 NDRCYQCGDRGHYAYDC 120
>gi|393911086|gb|EJD76160.1| hypothetical protein LOAG_16828 [Loa loa]
Length = 407
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K +AFVEFSD RDA+DA + LNGR + G R+IV+ A+ PRG
Sbjct: 34 LKNGYAFVEFSDRRDAEDAVHDLNGRSLLGDRVIVQNAKSRPRG 77
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1
[Takifugu rubripes]
Length = 374
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF DPRDADDA Y LNG+++ G R+IVE +G
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKG 72
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K F FVEF D RDADDA Y LNG+++ G R+ VE ARG RG
Sbjct: 34 IKNGFGFVEFDDHRDADDAVYELNGKELLGDRVSVELARGIRRG 77
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K F FVEF DPRD+DDA Y LNG+++ G R+ +E ARG
Sbjct: 59 LKNGFGFVEFEDPRDSDDAVYELNGKELCGERVTIEHARG 98
>gi|410910550|ref|XP_003968753.1| PREDICTED: uncharacterized protein LOC101078845 [Takifugu rubripes]
Length = 222
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 13/77 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG----- 59
FAFVEF DPRDA+DA ++G+ + GSR+ VE + G R GRG P
Sbjct: 52 FAFVEFEDPRDAEDAVKGMDGKLLCGSRVRVEMSTGLSRK--------GRGRPSRRQFDP 103
Query: 60 SGRCFNCGIDGHWARDC 76
+ RC+ CG GH+A DC
Sbjct: 104 NDRCYQCGDRGHYAYDC 120
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR-GPGGSREYLGRGPPPGSGRC 63
FAFVEF DPRDA+DA L+GR + G R+ VE + G R G P +C
Sbjct: 53 FAFVEFEDPRDAEDAVRGLDGRSICGRRVRVELSNAGSRKGAYRGGPPRRGRPFHPEDKC 112
Query: 64 FNCGIDGHWARDCK 77
+ CG GH+ARDC+
Sbjct: 113 YECGDRGHYARDCR 126
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 67 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 106
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FV+F D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 33 LKNGYGFVKFEDSRDADDAVYELNGKDLCGERVIVEHARG 72
>gi|71834670|ref|NP_001025438.1| serine/arginine-rich splicing factor 7 [Danio rerio]
gi|66911407|gb|AAH97250.1| Splicing factor, arginine/serine-rich 7 [Danio rerio]
Length = 178
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR-----GPGGSREYLGRGPPPG 59
FAFVEF DPRDA+D+ L+G+ + GSR+ VE + G PR P R P
Sbjct: 49 FAFVEFEDPRDAEDSVRGLDGKVICGSRVRVELSTGMPRRSRYDHPPSRR------PFDP 102
Query: 60 SGRCFNCGIDGHWARDCK 77
+ RC+ CG GH+A DC
Sbjct: 103 NDRCYECGEKGHYAYDCH 120
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS--GR 62
FAFVEF DPRDA+DA L+GR + G R VE + GG RG G PP R
Sbjct: 45 FAFVEFEDPRDAEDAVRGLDGRTICGRRARVEMSNGG-RGYGSRGPPPRSRLPPRPYDDR 103
Query: 63 CFNCGIDGHWARDC 76
C++CG GH+ARDC
Sbjct: 104 CYDCGDRGHYARDC 117
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHARG 72
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|442763085|gb|JAA73701.1| Putative alternative splicing factor, partial [Ixodes ricinus]
Length = 191
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+AFV++ D RDA+DA NGR++ G ++VE+ARG P ++ C+
Sbjct: 44 YAFVDYEDHRDAEDAVKYENGREIRGQSVVVEWARGPSFRPPAAK-------VSSFDECY 96
Query: 65 NCGIDGHWARDCKAGD 80
C GHWARDC GD
Sbjct: 97 RCRRTGHWARDCPEGD 112
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|221112058|ref|XP_002166471.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Hydra magnipapillata]
Length = 206
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
F F+ F DPRDA+DA ++GR V G R+ VE AR GP +R + +C+
Sbjct: 40 FGFIVFDDPRDAEDAIREMDGRRVCGMRVRVEKAR-GPNSNNRNR------SSAQNEKCY 92
Query: 65 NCGIDGHWARDCKA 78
NCG GH +RDC++
Sbjct: 93 NCGKIGHLSRDCRS 106
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Canis lupus familiaris]
Length = 344
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|449672683|ref|XP_004207769.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Hydra magnipapillata]
Length = 189
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
F F+ F DPRDA+DA ++GR V G R+ VE AR GP +R + +C+
Sbjct: 40 FGFIVFDDPRDAEDAIREMDGRRVCGMRVRVEKAR-GPNSNNRNR------SSAQNEKCY 92
Query: 65 NCGIDGHWARDCKA 78
NCG GH +RDC++
Sbjct: 93 NCGKIGHLSRDCRS 106
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|118380434|ref|XP_001023381.1| hypothetical protein TTHERM_00446190 [Tetrahymena thermophila]
gi|89305148|gb|EAS03136.1| hypothetical protein TTHERM_00446190 [Tetrahymena thermophila
SB210]
Length = 326
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 44/103 (42%), Gaps = 25/103 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG--PRGPGGSREYLGRGPPPGSGR 62
+ F+EF D RDA DA NG + G + +EF GG R G
Sbjct: 91 YGFIEFEDSRDAKDA-LKENGNSLKGKELRLEFGNGGRKKRNEG---------------- 133
Query: 63 CFNCGIDGHWARDC------KAGDWKNKCYRCGERGHIERNCQ 99
C+ CG H A+DC + KN+CY CG H R+C
Sbjct: 134 CYTCGSLHHIAKDCSKTRRTSSNGNKNRCYNCGSTSHKVRDCH 176
>gi|119596372|gb|EAW75966.1| splicing factor, arginine/serine-rich 6, isoform CRA_c [Homo
sapiens]
Length = 383
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 76 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 111
>gi|126309365|ref|XP_001367778.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 235
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P RC
Sbjct: 49 FAFVEFEDPRDAEDAVQGLDGKVICGSRVRVELSTGLPR-----RSRYDRPP----ARC- 98
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
D ++CY CGE+GH +C
Sbjct: 99 -------------PFDPNDRCYECGEKGHYAYDC 119
>gi|332858668|ref|XP_003317036.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 407
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 100 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 135
>gi|268531628|ref|XP_002630941.1| C. briggsae CBR-RSP-5 protein [Caenorhabditis briggsae]
Length = 213
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGS--RIIVEFARGGPRG 44
MK FAFV+F D RDA+DA + L+G+ +DGS R++VE A+G PRG
Sbjct: 33 MKYGFAFVDFEDYRDAEDACHDLDGKTMDGSSMRVVVEMAKGKPRG 78
>gi|71996524|ref|NP_495307.3| Protein RSP-5, isoform a [Caenorhabditis elegans]
gi|50897847|sp|Q10021.3|RSP5_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 5;
AltName: Full=CeSC35-2; AltName: Full=RNA-binding
protein srp-3
gi|351064335|emb|CCD72697.1| Protein RSP-5, isoform a [Caenorhabditis elegans]
Length = 208
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGS--RIIVEFARGGPRG 44
MK FAFV+F D RDA+DA + L+G+ ++GS R++VE ARG PRG
Sbjct: 33 MKYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRLVVEMARGKPRG 78
>gi|395533733|ref|XP_003768907.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Sarcophilus
harrisii]
Length = 235
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P RC
Sbjct: 49 FAFVEFEDPRDAEDAVQGLDGKVICGSRVRVELSTGLPR-----RSRYDRPP----ARC- 98
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
D ++CY CGE+GH +C
Sbjct: 99 -------------PFDPNDRCYECGEKGHYAYDC 119
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 18/86 (20%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR-----------GGPRG----- 44
MK F FV+F D RDADDA + LNG+D+ G R+I+EF R GG RG
Sbjct: 33 MKNGFGFVDFQDQRDADDAVHDLNGKDLCGERVILEFPRRKVGYNEERSGGGYRGREPTF 92
Query: 45 -PGGSREYLGRGPPPGSGRCFNCGID 69
GG R++ R P S R F +D
Sbjct: 93 RRGGERQFSNRYSRPCSTR-FRLVVD 117
>gi|308502850|ref|XP_003113609.1| CRE-RSP-5 protein [Caenorhabditis remanei]
gi|308263568|gb|EFP07521.1| CRE-RSP-5 protein [Caenorhabditis remanei]
Length = 215
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDG--SRIIVEFARGGPRG 44
MK FAFV+F D RDA+DA + L+G+ +DG R++VE ARG PRG
Sbjct: 33 MKYGFAFVDFEDHRDAEDACHDLDGKTMDGGSMRVVVEMARGKPRG 78
>gi|71996546|ref|NP_495308.3| Protein RSP-5, isoform d [Caenorhabditis elegans]
gi|351064338|emb|CCD72700.1| Protein RSP-5, isoform d [Caenorhabditis elegans]
Length = 208
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGS--RIIVEFARGGPRG 44
MK FAFV+F D RDA+DA + L+G+ ++GS R++VE ARG PRG
Sbjct: 33 MKYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRLVVEMARGKPRG 78
>gi|341892188|gb|EGT48123.1| CBN-RSP-5 protein [Caenorhabditis brenneri]
gi|341901487|gb|EGT57422.1| hypothetical protein CAEBREN_20510 [Caenorhabditis brenneri]
Length = 204
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGS--RIIVEFARGGPRG 44
MK FAFV+F D RDA+DA + L+GR +DGS R++V+ ARG PRG
Sbjct: 33 MKYGFAFVDFEDSRDAEDACHDLDGRTMDGSSMRVVVQMARGRPRG 78
>gi|197725795|gb|ACH73087.1| arginine/serine-rich 7 splicing factor [Epinephelus coioides]
Length = 200
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVE+ D RDA+DA ++G+ + GSRI VE + G R R P + RC+
Sbjct: 6 FAFVEYEDSRDAEDAVKGMDGKVLCGSRIRVELSTGLSRKTRYGRPSRRHFDP--NDRCY 63
Query: 65 NCGIDGHWARDC 76
CG GH+A DC
Sbjct: 64 QCGDKGHYAYDC 75
>gi|260819154|ref|XP_002604902.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
gi|229290231|gb|EEN60912.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
Length = 289
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE 36
+K F FVEF DPRDADDA Y LNG+++ G R+IVE
Sbjct: 34 LKNGFGFVEFDDPRDADDAVYELNGKELCGERVIVE 69
>gi|426232112|ref|XP_004010078.1| PREDICTED: uncharacterized protein LOC101116481 [Ovis aries]
Length = 233
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 72
>gi|410339103|gb|JAA38498.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410339105|gb|JAA38499.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P RC
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----ARC- 98
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
D ++CY CGE+GH +C
Sbjct: 99 -------------PFDPNDRCYECGEKGHYAYDC 119
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G +IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGEHVIVEHARG 72
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 39 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRYDRPP-------- 85
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
AR + D ++CY CGE+GH +C
Sbjct: 86 --------AR--RPFDPNDRCYECGEKGHYAYDC 109
>gi|405954502|gb|EKC21922.1| Splicing factor, arginine/serine-rich 6 [Crassostrea gigas]
Length = 231
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+ FV++ D RDA+DA NGR++ GS I VE+A+G PR P + G G C+
Sbjct: 46 YGFVDYEDRRDAEDALKYENGREICGSSIRVEWAKGNPRRPYAASSNRGGGM---YDECY 102
Query: 65 NCGIDGHWARDC 76
C GH+ARDC
Sbjct: 103 RCHRTGHFARDC 114
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2
[Oryzias latipes]
Length = 384
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K + FVEF DPRDADDA Y LNG+++ G R+IVE +
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTK 71
>gi|328774313|gb|EGF84350.1| hypothetical protein BATDEDRAFT_85071 [Batrachochytrium
dendrobatidis JAM81]
Length = 542
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 31/144 (21%)
Query: 14 RDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWA 73
+DAD+A +LN DG R++VEF+ R+ +G C CG +GHWA
Sbjct: 107 KDADEAVLALNNHSFDGRRLLVEFS--------NKRDSVGNS-------CLLCGNEGHWA 151
Query: 74 RDC-----KAGDWKN-KCYRCGERGHIERNCQN--------SPKKLRPRSYSRSPSPRR- 118
RDC + D K+ KC++CG GH+ R C+ P +R + Y S R
Sbjct: 152 RDCPDNKERGADVKSGKCFKCGSFGHLARFCRGPDTGSMVGVPVTVRDQGYPSKSSYRHL 211
Query: 119 -GRSRSRSYSRGRSDSRSRSPVKR 141
RSRSRS S+ RS SRSRSP+ +
Sbjct: 212 GFRSRSRSRSKSRSRSRSRSPIYK 235
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R+++E ARG
Sbjct: 34 LKNGYGFVEFDDYRDADDAVYELNGKELCGERVVIEHARG 73
>gi|355721871|gb|AES07404.1| splicing factor SRp55-1 [Mustela putorius furo]
Length = 250
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+ FVEF D RDADDA Y LNG+++ G R+IVE ARG
Sbjct: 1 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARG 36
>gi|354488931|ref|XP_003506619.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Cricetulus
griseus]
Length = 227
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 41 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 87
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 88 --------AR--RPFDPNDRCYECGEKGHYAYDCH 112
>gi|327262671|ref|XP_003216147.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Anolis carolinensis]
Length = 235
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRYDR-------PPAR---- 97
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 98 ------------RPFDPNDRCYECGEKGHYAYDCH 120
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G +IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNGKELCGEHVIVEHARG 72
>gi|71996532|ref|NP_495309.3| Protein RSP-5, isoform b [Caenorhabditis elegans]
gi|351064336|emb|CCD72698.1| Protein RSP-5, isoform b [Caenorhabditis elegans]
Length = 166
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGS--RIIVEFARGGPRG 44
MK FAFV+F D RDA+DA + L+G+ ++GS R++VE ARG PRG
Sbjct: 33 MKYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRLVVEMARGKPRG 78
>gi|194374435|dbj|BAG57113.1| unnamed protein product [Homo sapiens]
Length = 165
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|410339107|gb|JAA38500.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P RC
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----ARC- 98
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
D ++CY CGE+GH +C
Sbjct: 99 -------------PFDPNDRCYECGEKGHYAYDC 119
>gi|148706566|gb|EDL38513.1| mCG17902, isoform CRA_l [Mus musculus]
Length = 243
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 57 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 103
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 104 --------AR--RPFDPNDRCYECGEKGHYAYDCH 128
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
+AFVEF DPRDA DA Y NG D DG R+ VE A GG RGP R
Sbjct: 70 YAFVEFEDPRDAQDAIYGRNGYDFDGHRLRVELAHGG-RGPSFDR 113
>gi|148706559|gb|EDL38506.1| mCG17902, isoform CRA_e [Mus musculus]
gi|149050605|gb|EDM02778.1| rCG61762, isoform CRA_g [Rattus norvegicus]
Length = 215
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1
[Oryzias latipes]
Length = 372
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K + FVEF DPRDADDA Y LNG+++ G R+IVE +
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTK 71
>gi|344237407|gb|EGV93510.1| Splicing factor, arginine/serine-rich 7 [Cricetulus griseus]
Length = 227
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 38 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 84
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 85 --------AR--RPFDPNDRCYECGEKGHYAYDCH 109
>gi|268531976|ref|XP_002631116.1| C. briggsae CBR-RSP-2 protein [Caenorhabditis briggsae]
Length = 279
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 18/86 (20%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR-----------GGPRG----- 44
MK F FV+F + RDADDA + LNG+D+ G R+I+EF R GG RG
Sbjct: 33 MKNGFGFVDFQEQRDADDAVHDLNGKDLCGERVILEFPRRKVGYNEERSGGGFRGREPTF 92
Query: 45 -PGGSREYLGRGPPPGSGRCFNCGID 69
GG R++ R P S R F ID
Sbjct: 93 RRGGERQFSNRYSRPCSTR-FRLVID 117
>gi|306774101|ref|NP_001182415.1| serine/arginine-rich splicing factor 7 isoform 3 [Mus musculus]
Length = 227
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|306774098|ref|NP_001182414.1| serine/arginine-rich splicing factor 7 isoform 2 [Mus musculus]
gi|26350021|dbj|BAC38650.1| unnamed protein product [Mus musculus]
Length = 235
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|312077156|ref|XP_003141179.1| hypothetical protein LOAG_05594 [Loa loa]
Length = 214
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K +AFVEFSD RDA+DA + LNGR + G R+IV+ A+ PRG
Sbjct: 34 LKNGYAFVEFSDRRDAEDAVHDLNGRSLLGDRVIVQNAKSRPRG 77
>gi|224138534|ref|XP_002322838.1| predicted protein [Populus trichocarpa]
gi|222867468|gb|EEF04599.1| predicted protein [Populus trichocarpa]
Length = 65
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 13/66 (19%)
Query: 203 EYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPIDDD--DNHG 260
EYSGSPRG+SRSP + YRSPP+ NGRSRS P PRDDRSP+DDD DN+
Sbjct: 8 EYSGSPRGRSRSPRGE-------RYRSPPQTNGRSRS----PSPRDDRSPVDDDYEDNNR 56
Query: 261 DPRGSE 266
PR S+
Sbjct: 57 SPRDSD 62
>gi|297265840|ref|XP_002799297.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 2
[Macaca mulatta]
Length = 165
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
MK F FV+F D RDADDA + LNG+D+ G R+I+EF R
Sbjct: 33 MKNGFGFVDFQDQRDADDAVHDLNGKDLCGERVILEFPR 71
>gi|402581590|gb|EJW75538.1| splicing factor, partial [Wuchereria bancrofti]
Length = 212
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
+K +AFVEFSD RDA+DA + LNGR + G R+IV+ A+ PRG
Sbjct: 34 LKNGYAFVEFSDRRDAEDAVHDLNGRSLLGDRVIVQNAKSRPRG 77
>gi|348574612|ref|XP_003473084.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Cavia porcellus]
Length = 235
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|224046923|ref|XP_002199213.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Taeniopygia
guttata]
Length = 223
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 47 FAFVEFEDPRDAEDAVLGLDGKIICGSRVRVEVSTGMPRRSRYDR-------PPAR---- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 96 ------------RPFDPNDRCYECGEKGHYAYDCH 118
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 77 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 123
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 124 --------AR--RPFDPNDRCYECGEKGHYAYDCH 148
>gi|71897353|ref|NP_001026539.1| serine/arginine-rich splicing factor 7 [Gallus gallus]
gi|53127360|emb|CAG31063.1| hypothetical protein RCJMB04_1p22 [Gallus gallus]
Length = 223
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 47 FAFVEFEDPRDAEDAVLGLDGKIICGSRVRVEVSTGMPRRSRYDR-------PPAR---- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 96 ------------RPFDPNDRCYECGEKGHYAYDCH 118
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF D RDA+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 49 FAFVEFEDTRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRYDR-------PPAR---- 97
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +CQ
Sbjct: 98 ------------RPFDPSDRCYECGEKGHYAYDCQ 120
>gi|395846036|ref|XP_003795721.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Otolemur garnettii]
gi|351715512|gb|EHB18431.1| Splicing factor, arginine/serine-rich 7 [Heterocephalus glaber]
Length = 238
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|344288799|ref|XP_003416134.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Loxodonta africana]
Length = 238
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|431912751|gb|ELK14769.1| Splicing factor, arginine/serine-rich 7 [Pteropus alecto]
Length = 235
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|77735509|ref|NP_001029449.1| serine/arginine-rich splicing factor 7 [Bos taurus]
gi|122146164|sp|Q3T106.1|SRSF7_BOVIN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|74354545|gb|AAI02185.1| Splicing factor, arginine/serine-rich 7, 35kDa [Bos taurus]
gi|296482569|tpg|DAA24684.1| TPA: splicing factor, arginine/serine-rich 7 [Bos taurus]
Length = 235
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|225706912|gb|ACO09302.1| Splicing factor, arginine/serine-rich 7 [Osmerus mordax]
Length = 208
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVE+ D RDA+DA ++G+ + G+RI VE + G R R P + RC+
Sbjct: 53 FAFVEYEDTRDAEDAVKGMDGKVLCGARIRVELSTGMSRKSRYGRPSRRNFDP--NDRCY 110
Query: 65 NCGIDGHWARDC 76
CG GH+A DC
Sbjct: 111 QCGESGHYAYDC 122
>gi|395508189|ref|XP_003758396.1| PREDICTED: uncharacterized protein LOC100934570 [Sarcophilus
harrisii]
Length = 235
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 51 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRYDR-------PPAR---- 99
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 100 ------------RPFDPNDRCYECGEKGHYAYDCH 122
>gi|307133722|ref|NP_001182517.1| splicing factor, arginine/serine-rich 7 [Equus caballus]
gi|73980752|ref|XP_532939.2| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Canis
lupus familiaris]
gi|301777346|ref|XP_002924090.1| PREDICTED: splicing factor, arginine/serine-rich 7-like [Ailuropoda
melanoleuca]
gi|311252785|ref|XP_003125258.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Sus scrofa]
gi|410955427|ref|XP_003984355.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Felis
catus]
gi|426223793|ref|XP_004006058.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Ovis
aries]
gi|440907651|gb|ELR57771.1| Serine/arginine-rich splicing factor 7 [Bos grunniens mutus]
Length = 238
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|417397587|gb|JAA45827.1| Putative serine/arginine-rich splicing factor 7 [Desmodus rotundus]
Length = 235
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDC 119
>gi|306774103|ref|NP_001182416.1| serine/arginine-rich splicing factor 7 isoform 4 [Mus musculus]
Length = 223
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LN +++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHARG 72
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 47/95 (49%), Gaps = 22/95 (23%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF D RDA+DA L+GR + G R VE + G R Y RG GR F
Sbjct: 49 FAFVEFEDARDAEDAIRGLDGRTICGRRARVEPSNGRRLR---DRSYFRRGI----GRLF 101
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ +++CY CGERGH RNCQ
Sbjct: 102 HP---------------EDRCYECGERGHYARNCQ 121
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1
[Oreochromis niloticus]
Length = 390
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE 36
+K + FVEF DPRDADDA Y LNG+++ G R+IVE
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVE 68
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 78 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 124
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 125 --------AR--RPFDPNDRCYECGEKGHYAYDCH 149
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3
[Oryzias latipes]
Length = 388
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K + FVEF DPRDADDA Y LNG+++ G R+IVE +
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTK 71
>gi|22122585|ref|NP_666195.1| serine/arginine-rich splicing factor 7 isoform 1 [Mus musculus]
gi|306922410|ref|NP_001034124.2| splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|19343869|gb|AAH25529.1| Splicing factor, arginine/serine-rich 7 [Mus musculus]
gi|74202235|dbj|BAE23499.1| unnamed protein product [Mus musculus]
gi|74212267|dbj|BAE40291.1| unnamed protein product [Mus musculus]
gi|148706555|gb|EDL38502.1| mCG17902, isoform CRA_a [Mus musculus]
gi|149050602|gb|EDM02775.1| rCG61762, isoform CRA_d [Rattus norvegicus]
Length = 238
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2
[Oreochromis niloticus]
Length = 386
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE 36
+K + FVEF DPRDADDA Y LNG+++ G R+IVE
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVE 68
>gi|326915074|ref|XP_003203846.1| PREDICTED: hypothetical protein LOC100542161 [Meleagris gallopavo]
Length = 273
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 82 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVEVSTGMPR-----RSRYDRPP-------- 128
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 129 --------AR--RPFDPNDRCYECGEKGHYAYDCH 153
>gi|348574614|ref|XP_003473085.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Cavia porcellus]
Length = 227
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDC 119
>gi|297265846|ref|XP_002799299.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 4
[Macaca mulatta]
Length = 208
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDC 119
>gi|126304540|ref|XP_001362853.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 233
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRYDR-------PPAR---- 97
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 98 ------------RPFDPNDRCYECGEKGHYAYDCH 120
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 35/53 (66%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPP 57
FAFVEF DPRDA+DA ++ +G D DG R+ VEF RG G G GRGPP
Sbjct: 47 FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGSAPGRGSMGPGRGRGPP 99
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma
variegatum]
Length = 222
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 35/53 (66%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPP 57
FAFVEF DPRDA+DA ++ +G D DG R+ VEF RG G G GRGPP
Sbjct: 47 FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGSAPGRGSMGPGRGRGPP 99
>gi|328908705|gb|AEB61020.1| serine/arginine-rich splicing factor 7-like protein [Equus
caballus]
Length = 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|342180044|emb|CCC89520.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 407
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
K+ FAFV F+D + A +NG D DG R+ +E R+
Sbjct: 223 KKQFAFVGFADEKSC-LAAIDMNGFDFDGQRVQIE-----------RRQ---------KQ 261
Query: 62 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRG 119
RC+ C +GH A C + C CG GH+ R+C ++ PRSY R P G
Sbjct: 262 RCYKCNREGHVALQCHM--QEQTCRNCGRAGHMARDC-----RMTPRSYDRRVGPHNG 312
>gi|72534660|ref|NP_001026854.1| serine/arginine-rich splicing factor 7 isoform 1 [Homo sapiens]
gi|307133718|ref|NP_001182515.1| splicing factor, arginine/serine-rich 7 [Macaca mulatta]
gi|307133726|ref|NP_001182519.1| splicing factor, arginine/serine-rich 7 [Pongo abelii]
gi|296224047|ref|XP_002757879.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Callithrix jacchus]
gi|332227248|ref|XP_003262805.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Nomascus leucogenys]
gi|332813155|ref|XP_515421.3| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
troglodytes]
gi|397493583|ref|XP_003817683.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Pan
paniscus]
gi|397493585|ref|XP_003817684.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
paniscus]
gi|402890618|ref|XP_003908580.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Papio
anubis]
gi|403269672|ref|XP_003926840.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Saimiri boliviensis boliviensis]
gi|426335282|ref|XP_004029157.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Gorilla gorilla gorilla]
gi|3929380|sp|Q16629.1|SRSF7_HUMAN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor 9G8; AltName: Full=Splicing factor,
arginine/serine-rich 7
gi|506402|gb|AAA35495.1| 9G8 splicing factor [Homo sapiens]
gi|950424|gb|AAA88098.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|12654349|gb|AAH00997.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|16924200|gb|AAH17369.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|17389794|gb|AAH17908.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|18490620|gb|AAH22328.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|27369421|gb|AAN87842.1| arginine/serine-rich splicing factor 7 type B [Homo sapiens]
gi|30582329|gb|AAP35391.1| splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|46981983|gb|AAT08040.1| aging-associated protein 3 [Homo sapiens]
gi|61361883|gb|AAX42119.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|61361888|gb|AAX42120.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|62702176|gb|AAX93102.1| unknown [Homo sapiens]
gi|67970972|dbj|BAE01828.1| unnamed protein product [Macaca fascicularis]
gi|90076474|dbj|BAE87917.1| unnamed protein product [Macaca fascicularis]
gi|119620771|gb|EAX00366.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_d [Homo
sapiens]
gi|261858750|dbj|BAI45897.1| splicing factor, arginine/serine-rich 7, 35kDa [synthetic
construct]
gi|292698389|dbj|BAI99737.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|355565621|gb|EHH22050.1| hypothetical protein EGK_05239 [Macaca mulatta]
gi|355751260|gb|EHH55515.1| hypothetical protein EGM_04737 [Macaca fascicularis]
gi|380815572|gb|AFE79660.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420743|gb|AFH33585.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948778|gb|AFI37994.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|410213320|gb|JAA03879.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251182|gb|JAA13558.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299022|gb|JAA28111.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDC 119
>gi|348574616|ref|XP_003473086.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Cavia porcellus]
Length = 223
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|30584739|gb|AAP36622.1| Homo sapiens splicing factor, arginine/serine-rich 7, 35kDa
[synthetic construct]
gi|60653769|gb|AAX29578.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
gi|60653771|gb|AAX29579.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
Length = 239
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDC 119
>gi|380815574|gb|AFE79661.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420741|gb|AFH33584.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948776|gb|AFI37993.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
Length = 235
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDC 119
>gi|148706562|gb|EDL38509.1| mCG17902, isoform CRA_h [Mus musculus]
gi|149050603|gb|EDM02776.1| rCG61762, isoform CRA_e [Rattus norvegicus]
Length = 226
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LN +++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHARG 72
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LN +++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHARG 72
>gi|449274550|gb|EMC83651.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 226
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 40 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVEVSTGMPRRSRYDR-------PPAR---- 88
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 89 ------------RPFDPNDRCYECGEKGHYAYDCH 111
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus
norvegicus]
Length = 339
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LN +++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHARG 72
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LN +++ G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHARG 72
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS-GRC 63
FAFVEF DPRDA+DA L+GR + G R VE + G RG G R PP RC
Sbjct: 45 FAFVEFEDPRDAEDAIRGLDGRTICGRRARVEMSN-GSRGYGRGPPPRSRLPPRPYDDRC 103
Query: 64 FNCGIDGHWARDCK 77
++CG GH+ARDC
Sbjct: 104 YDCGDRGHYARDCT 117
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y LNG+++ G R++VE ARG
Sbjct: 35 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARG 74
>gi|395846038|ref|XP_003795722.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Otolemur garnettii]
Length = 226
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|344288801|ref|XP_003416135.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Loxodonta africana]
Length = 226
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|311252787|ref|XP_003125259.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Sus scrofa]
gi|345782230|ref|XP_003432237.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Canis
lupus familiaris]
gi|410955429|ref|XP_003984356.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Felis
catus]
gi|426223795|ref|XP_004006059.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Ovis
aries]
Length = 226
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|328770674|gb|EGF80715.1| hypothetical protein BATDEDRAFT_88044 [Batrachochytrium
dendrobatidis JAM81]
Length = 211
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG--GPRGPGGSRE 50
FAFVE+ DP+DA DA SLNG++VDG +++E+A+ R PGGS +
Sbjct: 47 FAFVEYKDPQDAQDAFDSLNGKEVDGKSLVIEWAKTPLSDRRPGGSSQ 94
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 18/91 (19%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR-----------GGPRG----- 44
MK F FV+F D RDADDA + LNG+++ G R+I+EF R G RG
Sbjct: 33 MKNGFGFVDFQDQRDADDAVHDLNGKELCGERVILEFPRRKVGYNEERSGSGFRGREPTF 92
Query: 45 -PGGSREYLGRGPPPGSGRCFNCGIDGHWAR 74
GG R++ R P S R F ID R
Sbjct: 93 RKGGERQFSNRYSRPCSTR-FRLVIDNLSTR 122
>gi|384489855|gb|EIE81077.1| hypothetical protein RO3G_05782 [Rhizopus delemar RA 99-880]
Length = 211
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 22/81 (27%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
F FVEF D RDA+DA + G + ++VE+A+ G G P C+
Sbjct: 37 FGFVEFDDKRDAEDA---MKGIHETVAELVVEWAKNG-------------GKRPSENECY 80
Query: 65 NCG------IDGHWARDCKAG 79
+CG + GH+ARDC+ G
Sbjct: 81 HCGRSETYLLAGHYARDCREG 101
>gi|198422995|ref|XP_002122454.1| PREDICTED: zinc finger (CCHC)-24 isoform 2 [Ciona intestinalis]
Length = 205
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FA+VEF DPRDADDA L+G+++ G RI VE + G PR G R+ R P
Sbjct: 43 FAYVEFEDPRDADDAIKGLDGKELHGRRIRVERSHGMPRNRGSDRDRSRRAFHP------ 96
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
++CY CGE GH +C
Sbjct: 97 -----------------SDRCYNCGETGHYAYDC 113
>gi|355718930|gb|AES06434.1| splicing factor, arginine/serine-rich 7, 35kDa [Mustela putorius
furo]
Length = 199
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 58 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPAR---- 106
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 107 ------------RPFDPNDRCYECGEKGHYAYDCH 129
>gi|363731484|ref|XP_003640982.1| PREDICTED: uncharacterized protein LOC100859609 [Gallus gallus]
Length = 250
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVEVSTGMPR-----RSRYDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|306482694|ref|NP_001182375.1| serine/arginine-rich splicing factor 7 isoform 2 [Homo sapiens]
gi|297265844|ref|XP_002799298.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 3
[Macaca mulatta]
gi|332227250|ref|XP_003262806.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Nomascus leucogenys]
gi|390474551|ref|XP_003734800.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Callithrix jacchus]
gi|402890620|ref|XP_003908581.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Papio
anubis]
gi|403269674|ref|XP_003926841.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Saimiri boliviensis boliviensis]
gi|426335284|ref|XP_004029158.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Gorilla gorilla gorilla]
gi|119620770|gb|EAX00365.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_c [Homo
sapiens]
gi|383420739|gb|AFH33583.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|384948774|gb|AFI37992.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|387542062|gb|AFJ71658.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|410213318|gb|JAA03878.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251180|gb|JAA13557.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299020|gb|JAA28110.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDC 119
>gi|350538991|ref|NP_001232123.1| putative splicing factor arginine/serine-rich 7 variant 2
[Taeniopygia guttata]
gi|197127816|gb|ACH44314.1| putative splicing factor arginine/serine-rich 7 variant 2
[Taeniopygia guttata]
Length = 250
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVEVSTGMPR-----RSRYDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|72167806|ref|XP_789638.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 215
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG----GPRGPGGSREYLGRGPPPGS 60
FAFVEF DPRDA DA L+ + G R VE + G GG GRGPP G
Sbjct: 96 FAFVEFDDPRDASDAVKDLDSSTICGQRASVELSSGDSRRRGGFRGGGSFRGGRGPPRGD 155
Query: 61 GRCFNCGIDGHWARDC 76
+C+ CG GH+ARDC
Sbjct: 156 SKCYECGEIGHFARDC 171
>gi|150387449|gb|ABR68245.1| arginine/serine-rich 7 splicing factor [Cervus elaphus]
Length = 206
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 44 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 90
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 91 --------AR--RPFDPNDRCYECGEKGHYAYDCH 115
>gi|403353670|gb|EJY76377.1| hypothetical protein OXYTRI_02116 [Oxytricha trifallax]
Length = 301
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 19/85 (22%)
Query: 4 DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG----------SREYLG 53
++AF+EF + RDA++A L G+D+ G +I +E+++ R SR+ L
Sbjct: 102 NYAFIEFDNERDAEEAVDELQGKDMGGLKINIEWSKKSGRFNAKDSKRPQRSERSRDDL- 160
Query: 54 RGPPPGSGRCFNCGIDGHWARDCKA 78
+C+NC GH+ARDC+A
Sbjct: 161 --------KCYNCNKTGHFARDCRA 177
>gi|327262673|ref|XP_003216148.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Anolis carolinensis]
Length = 225
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRYDR-------PPAR---- 97
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 98 ------------RPFDPNDRCYECGEKGHYAYDCH 120
>gi|383850973|ref|XP_003701038.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Megachile
rotundata]
Length = 206
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 46/96 (47%), Gaps = 24/96 (25%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP-GSGRC 63
FAFVEF D RDA+DA L+GR + G R VE P R RG G GR
Sbjct: 49 FAFVEFEDARDAEDAIRGLDGRIICGRRARVE--------PSNGRRLRDRGYFRRGIGRL 100
Query: 64 FNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
F+ +++CY CGE+GH RNCQ
Sbjct: 101 FHP---------------EDRCYECGEKGHYARNCQ 121
>gi|156354446|ref|XP_001623405.1| predicted protein [Nematostella vectensis]
gi|156210100|gb|EDO31305.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF F D RDA+DA L+GR + G R VE A+G R GR + +C+
Sbjct: 40 FAFCVFEDRRDAEDAVRELDGRYICGQRARVELAKGPSR---------GRPRQASNEKCY 90
Query: 65 NCGIDGHWARDC 76
CG GH+ARDC
Sbjct: 91 ECGRVGHFARDC 102
>gi|209153932|gb|ACI33198.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 223
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVE+ D RDA+DA ++G+ + GSRI VE + G R R P RC+
Sbjct: 54 FAFVEYEDARDAEDAVKGMDGKVLCGSRIRVELSTGMSRKTKHGRPSRRHFDP--QDRCY 111
Query: 65 NCGIDGHWARDC 76
CG GH+A DC
Sbjct: 112 QCGDRGHYAYDC 123
>gi|432106513|gb|ELK32262.1| Serine/arginine-rich splicing factor 7 [Myotis davidii]
Length = 226
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFV F DPRDA+DA L+G+ + SR+ VE + G PR R YL R P
Sbjct: 55 FAFVGFEDPRDAEDAVRGLDGKVICDSRVRVELSTGMPR-----RSYLDRPP-------- 101
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR D ++CY CGE+GH C
Sbjct: 102 --------AR--HPFDPNDRCYECGEKGHYAYYCH 126
>gi|148706556|gb|EDL38503.1| mCG17902, isoform CRA_b [Mus musculus]
gi|149050601|gb|EDM02774.1| rCG61762, isoform CRA_c [Rattus norvegicus]
Length = 209
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDCH 120
>gi|126631485|gb|AAI33852.1| Sfrs7 protein [Danio rerio]
Length = 210
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+D+ L+G+ + GSR+ VE + G PR R P S R F
Sbjct: 49 FAFVEFEDPRDAEDSVRGLDGKVICGSRVRVELSTGMPR--------RSRYDHPPSRRPF 100
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
D ++CY CGE+GH +C
Sbjct: 101 ---------------DPNDRCYECGEKGHYAYDCH 120
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 371
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K + FVEF + +DADDA Y L+GRD+ G R+IVE AR
Sbjct: 33 LKNGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHAR 71
>gi|260790117|ref|XP_002590090.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
gi|229275278|gb|EEN46101.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
Length = 326
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG-PG-GSREYLGRGPPP 58
+ +++ FV + +DA+DA +L + G+RI VE ++ R PG GSR
Sbjct: 52 IIKNYGFVHMDNEQDANDAIKALTNTEWMGTRITVEMSKSKVRTQPGQGSR--------- 102
Query: 59 GSGRCFNCGIDGHWARDC 76
G C+ CG GHW+RDC
Sbjct: 103 --GECYRCGKMGHWSRDC 118
>gi|15928796|gb|AAH14857.1| Sfrs7 protein [Mus musculus]
Length = 226
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPAR---- 97
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 98 ------------RPFDPNDRCYECGEKGHYAYDCH 120
>gi|340506876|gb|EGR32928.1| splicing arginine serine-rich 4, putative [Ichthyophthirius
multifiliis]
Length = 243
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 15/72 (20%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+ F+EF D RDA DA N + G +I +EF GG R RE CF
Sbjct: 62 YGFIEFQDHRDAKDALDDCNNMEFKGKQIRLEFGHGGKR----RRE-----------NCF 106
Query: 65 NCGIDGHWARDC 76
NCG H +DC
Sbjct: 107 NCGYSNHATKDC 118
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 34/53 (64%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPP 57
FAFVEF DPRDA+DA + +G D DG R+ VEF RG G G GRGPP
Sbjct: 47 FAFVEFDDPRDAEDAVQARDGYDYDGYRLRVEFPRGSAPGRGSMGPGRGRGPP 99
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K + FVEF + +DADDA Y L+GRD+ G R+IVE AR
Sbjct: 33 LKNGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHAR 71
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K + FVEF + +DADDA Y L+GRD+ G R+IVE AR
Sbjct: 33 LKNGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHAR 71
>gi|147900017|ref|NP_001086749.1| serine/arginine-rich splicing factor 7 [Xenopus laevis]
gi|50603927|gb|AAH77393.1| MGC81677 protein [Xenopus laevis]
Length = 234
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF D RDA+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 49 FAFVEFEDTRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRYDR-------PPAR---- 97
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +CQ
Sbjct: 98 ------------RPFDPSDRCYECGEKGHYAYDCQ 120
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
+AFVEF DPRDA DA Y +G D DG R+ VE A GG RGP R
Sbjct: 47 YAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAHGG-RGPSFDR 90
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K + FVEF + +DADDA Y L+GRD+ G R+IVE AR
Sbjct: 33 LKNGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHAR 71
>gi|116284263|gb|AAI24193.1| Zgc:55809 protein [Danio rerio]
Length = 284
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
+K + FVEF DPRDADDA Y LNG+D+ G R+I EF
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKDLCGKRVI-EF 68
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K + FVEF + +DADDA Y L+GRD+ G R+IVE AR
Sbjct: 33 LKNGYGFVEFDNEKDADDAVYDLHGRDLRGERLIVEHAR 71
>gi|328876417|gb|EGG24780.1| hypothetical protein DFA_03024 [Dictyostelium fasciculatum]
Length = 1023
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K+ F FVEFSD ADDA S N G I+VE + GP G+ + PG
Sbjct: 33 LKKGFCFVEFSDSSSADDAISSTNHTTFLGKEILVEKSHAGP----GAIPFKN----PGE 84
Query: 61 GRCFNCGIDGHWARDCKAGD 80
G+CFNC +GHWA++C D
Sbjct: 85 GKCFNCRQEGHWAKECPEKD 104
>gi|330840365|ref|XP_003292187.1| hypothetical protein DICPUDRAFT_99253 [Dictyostelium purpureum]
gi|325077575|gb|EGC31278.1| hypothetical protein DICPUDRAFT_99253 [Dictyostelium purpureum]
Length = 288
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+++ F FVE+ D ADDA S N + G I+VE + SR G GS
Sbjct: 33 LRKGFCFVEYLDKNAADDAINSENKQFFLGRDIVVELSNS-------SR---GIKKDIGS 82
Query: 61 GRCFNCGIDGHWARDC 76
G+CF C +GHWAR C
Sbjct: 83 GKCFFCDEEGHWARSC 98
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
+K + FVEF D RDADDA L+G+D++GSR+ VEFAR GGSR
Sbjct: 37 LKNGYGFVEFEDHRDADDAVQDLDGKDMNGSRVRVEFARSPRDKRGGSR 85
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
+AFVEF DPRDA DA Y +G D DG R+ VE A GG RGP R
Sbjct: 47 YAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAHGG-RGPSFDR 90
>gi|145533591|ref|XP_001452540.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420239|emb|CAK85143.1| unnamed protein product [Paramecium tetraurelia]
Length = 234
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+ F+EF DP DA+ A +N +V GS + VE ARG P +G C+
Sbjct: 52 YCFIEFKDPEDAEKAVKKMNKEEVKGSVLQVEMARGNK-------------PSKNNGLCY 98
Query: 65 NCGIDGHWAR 74
+CG GH R
Sbjct: 99 SCGHSGHLIR 108
>gi|291230089|ref|XP_002735000.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus kowalevskii]
Length = 182
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP----GS 60
FAFVEF DPRDA DA L+ + G I E + G R R PPP
Sbjct: 51 FAFVEFEDPRDASDACRGLDKTKLCGVEIRAELSSGKSRWAKWGR------PPPRRSFSE 104
Query: 61 GRCFNCGIDGHWARDC 76
RC+ CG GH+ARDC
Sbjct: 105 ERCYECGKRGHFARDC 120
>gi|148706563|gb|EDL38510.1| mCG17902, isoform CRA_i [Mus musculus]
Length = 205
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPAR---- 97
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 98 ------------RPFDPNDRCYECGEKGHYAYDCH 120
>gi|440803900|gb|ELR24783.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 351
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 52 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNS 101
G G P G C+ CG+ GH+AR+C GD K CY+CG GHI ++C
Sbjct: 284 FGGGRPAG---CYKCGVSGHFARECPKGDVKT-CYKCGLDGHIAKDCDTC 329
>gi|149050604|gb|EDM02777.1| rCG61762, isoform CRA_f [Rattus norvegicus]
Length = 207
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 23/95 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+G+ + GSR+ VE + G PR R R PP
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPAR---- 97
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
+ D ++CY CGE+GH +C
Sbjct: 98 ------------RPFDPNDRCYECGEKGHYAYDCH 120
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 83/178 (46%), Gaps = 43/178 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG--------GPRGPG----GSREYL 52
FAFVEF DPRDA+DA ++ +G D DG R+ VEF RG G RG G G R +
Sbjct: 48 FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEM 107
Query: 53 ----GRGPPP--GSGRCFNCGI--DGHWARDCK-----AGDW-KNKCYRCGERGHIE--- 95
GRGPP R G+ G W +D K AGD Y+ G G +E
Sbjct: 108 SNSRGRGPPARRSQYRVLVTGLPPSGSW-QDLKDHMREAGDVCFADVYKDGT-GVVEFLR 165
Query: 96 -RNCQNSPKKL---RPRSYSRSPSPRRG--------RSRSRSYSRGRSDSRSRSPVKR 141
+ + + KKL R RS+ + R R RS RGRS SRS SP +R
Sbjct: 166 YEDMKYAVKKLDDSRFRSHEGEVAYIRVKEDHSSGDRGRSEDRERGRSHSRSYSPRRR 223
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 83/178 (46%), Gaps = 43/178 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG--------GPRGPG----GSREYL 52
FAFVEF DPRDA+DA ++ +G D DG R+ VEF RG G RG G G R +
Sbjct: 48 FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEM 107
Query: 53 ----GRGPPP--GSGRCFNCGI--DGHWARDCK-----AGDW-KNKCYRCGERGHIE--- 95
GRGPP R G+ G W +D K AGD Y+ G G +E
Sbjct: 108 SNSRGRGPPARRSQYRVLVTGLPPSGSW-QDLKDHMREAGDVCFADVYKDGT-GVVEFLR 165
Query: 96 -RNCQNSPKKL---RPRSYSRSPSPRRG--------RSRSRSYSRGRSDSRSRSPVKR 141
+ + + KKL R RS+ + R R RS RGRS SRS SP +R
Sbjct: 166 YEDMKYAVKKLDDSRFRSHEGEVAYIRVKEDHNSGDRGRSEDRERGRSHSRSYSPRRR 223
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
+K F FVEF DPRDADDA Y LNG+++ R+ +E A
Sbjct: 35 LKNGFGFVEFDDPRDADDAVYELNGKELCSERVTIEHA 72
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like
[Oreochromis niloticus]
Length = 293
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+KR F FVEF DPRDA+DA Y L+G+++ R+ +E AR
Sbjct: 35 LKRGFGFVEFDDPRDAEDAVYELDGKELCNERVTIEHAR 73
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+V+F D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 51 RGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|209737830|gb|ACI69784.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
gi|209738644|gb|ACI70191.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 200
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
F FVE++D RDA+DA ++G+ V GSRI VE AR ++ GRC
Sbjct: 53 FGFVEYADARDAEDAVKGMDGKVVWGSRIHVELAR------KAKHDHPSNHHIDPQGRCN 106
Query: 65 NCGIDGHWARDCK 77
CG GH+A +C+
Sbjct: 107 QCGNRGHYAYNCE 119
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 51/94 (54%), Gaps = 20/94 (21%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG---PRGPGGSREYLGRGPPP--G 59
FAFVEF DPRDA+DA + +G D DG ++ VEF RG PRG G SR GRGPP
Sbjct: 46 FAFVEFEDPRDAEDAVSARDGYDYDGYKLRVEFPRGNSARPRG-GPSR---GRGPPARRS 101
Query: 60 SGRCFNCGI--DGHWARDCK-----AGDWKNKCY 86
R G+ G W +D K AGD CY
Sbjct: 102 QYRVIVTGLPPTGSW-QDLKDHMREAGD---VCY 131
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K + FVEF D RDADDA L+G+D++GSR+ VEFAR
Sbjct: 37 LKNGYGFVEFEDHRDADDAVQDLDGKDMNGSRVRVEFAR 75
>gi|354466061|ref|XP_003495494.1| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Cricetulus griseus]
Length = 249
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+V+F D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 39 RGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 82
>gi|410988846|ref|XP_004000688.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Felis
catus]
Length = 164
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAFVEF DPRDA DA LNGR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFVEFEDPRDAADAVRELNGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|209735146|gb|ACI68442.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 200
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
F FVE++D RDA+DA ++G+ V GSRI VE AR ++ GRC
Sbjct: 53 FGFVEYADARDAEDAVKGMDGKVVWGSRIHVELAR------KAKHDHPSNHHIDPQGRCN 106
Query: 65 NCGIDGHWARDCK 77
CG GH+A +C+
Sbjct: 107 QCGNRGHYAYNCE 119
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+V+F D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 51 RGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35;
AltName: Full=Splicing factor, arginine/serine-rich
13B; AltName: Full=Splicing factor,
arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+V+F D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 51 RGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|302695537|ref|XP_003037447.1| hypothetical protein SCHCODRAFT_104251 [Schizophyllum commune H4-8]
gi|300111144|gb|EFJ02545.1| hypothetical protein SCHCODRAFT_104251, partial [Schizophyllum
commune H4-8]
Length = 490
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K + FVEF +P A ++ + G++I VE ++GG + SR + PGS
Sbjct: 108 LKIGYGFVEFDNPEAAIESVNKYHEGYFMGNKIRVEISKGGSK----SRHAMD----PGS 159
Query: 61 GRCFNCGIDGHWARDC 76
CF CG+ GHWAR+C
Sbjct: 160 --CFRCGVPGHWAREC 173
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE------------FARGG-PRGPGGSR 49
R F F+ F+D R +DA ++GR++DG I V + GG R GG
Sbjct: 48 RGFGFITFADHRAMEDAIREMHGRELDGRVISVNKAQPKMGSEDSGYGYGGRDRMLGGRD 107
Query: 50 EYLGRGPPPG-SGRCFNCGIDGHWARDC 76
Y G P G S CF CG GHWARDC
Sbjct: 108 SYRGVDKPVGRSDDCFKCGRPGHWARDC 135
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
FAFVEF D RDADDA + +G D DG R+ VEF RGG GPG R
Sbjct: 47 FAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGG--GPGSYR 89
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
FAFVEF DPRDA+DA ++ +G D DG R+ VEF RGG
Sbjct: 48 FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGG 84
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+KR F FVEF DPRDA+DA Y L+G+++ R+ +E AR
Sbjct: 35 LKRGFGFVEFDDPRDAEDAVYELDGKELCNERVTIEHAR 73
>gi|145518856|ref|XP_001445300.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412744|emb|CAK77903.1| unnamed protein product [Paramecium tetraurelia]
Length = 454
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 13/74 (17%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA--RGGPRGPGGSREYLGRGPPPGSGR 62
++FV F +A+DA +LNG+ ++G ++ V+ R G R P +
Sbjct: 44 YSFVTFQSESEAEDALKALNGQTINGQKLKVDVVDNRKGRRSG-----------PQENDE 92
Query: 63 CFNCGIDGHWARDC 76
CF CG GHWAR+C
Sbjct: 93 CFKCGKGGHWAREC 106
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
FAFVEF DPRDA+DA ++ +G D DG R+ VEF RGG
Sbjct: 48 FAFVEFDDPRDAEDAVHARDGYDYDGYRLRVEFPRGG 84
>gi|291241385|ref|XP_002740592.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus kowalevskii]
Length = 179
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP----GS 60
FAF+EF D RDA DA L+ R V G + VE + G R GG G PP
Sbjct: 49 FAFIEFEDARDASDAIRGLDKRRVCGVEVRVELSSGKSRRGGGGGGRGGGRPPQRRSFSE 108
Query: 61 GRCFNCGIDGHWARDC 76
RC+ CG GH+ARDC
Sbjct: 109 ERCYECGKHGHFARDC 124
>gi|291230091|ref|XP_002735001.1| PREDICTED: RNA-binding protein, putative-like [Saccoglossus
kowalevskii]
Length = 227
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFV F DA++A + ++GR + G R+ V AR PR G R RG P RC+
Sbjct: 82 FAFVVFKRSSDAEEAVHDMDGRMLCGGRVRVSLAR--PRTQGRGR----RGYDPNL-RCY 134
Query: 65 NCGIDGHWARDCK 77
CG GH++RDC+
Sbjct: 135 QCGERGHFSRDCR 147
>gi|145500822|ref|XP_001436394.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403533|emb|CAK68997.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 15/75 (20%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRI---IVEFARGGPRGPGGSREYLGRGPPPGSG 61
++FV FS +A +A +LNG+ ++G ++ IV+ +G GP E
Sbjct: 44 YSFVTFSAESEAQNAISALNGQQINGQKLKVDIVDNHKGRRSGPQEKDE----------- 92
Query: 62 RCFNCGIDGHWARDC 76
CF CG GHWAR+C
Sbjct: 93 -CFKCGQGGHWAREC 106
>gi|72167808|ref|XP_789661.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Strongylocentrotus purpuratus]
gi|390364611|ref|XP_003730646.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Strongylocentrotus purpuratus]
Length = 190
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG--------GPRGPGGSREYLGRGP 56
FAFVE+ DPRDA DA ++ + G R VE + G G G GG GRGP
Sbjct: 70 FAFVEYEDPRDASDAVKDMDSSTICGQRARVELSSGDSRRRGFRGGGGGGGGSFRGGRGP 129
Query: 57 PPGSGRCFNCGIDGHWARDC 76
P G +C+ CG GH+ARDC
Sbjct: 130 PRGDSKCYECGETGHFARDC 149
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus
adamanteus]
Length = 234
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+++F D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 51 RGFAYIQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+AFVEF D RDA+DA Y +G DG R+ VEFA GG RG S + R GS R F
Sbjct: 47 YAFVEFEDVRDAEDAIYGRDGYKFDGCRLRVEFAHGG-RGHSSS---VDRYSRSGSSRDF 102
Query: 65 NCGIDG 70
+ G
Sbjct: 103 AVLVTG 108
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+++F D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 51 RGFAYIQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|194386188|dbj|BAG59658.1| unnamed protein product [Homo sapiens]
Length = 226
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 23/94 (24%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF PRDA+DA L+G+ + GSR+ VE + G PR R R P
Sbjct: 49 FAFVEFEGPRDAEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP-------- 95
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
AR + D ++CY CGE+GH +C
Sbjct: 96 --------AR--RPFDPNDRCYECGEKGHYAYDC 119
>gi|413950003|gb|AFW82652.1| hypothetical protein ZEAMMB73_474332 [Zea mays]
Length = 221
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 18/138 (13%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
R F F+++ DP DA DA+Y ++G+ + G +V FA + P R R G GR
Sbjct: 87 RGFGFIQYFDPEDASDAKYHMDGKMLLGRETVVVFAEENRKKPSDMR---AREKISGRGR 143
Query: 63 CFNCGIDGHW-ARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRS 121
+ DG +R D RG + ++ L+ + YSRSP+P R RS
Sbjct: 144 SY----DGRLRSRSPGLND--------SPRGRLRSQSRSYSPALKQKHYSRSPAPPRERS 191
Query: 122 RSRSYSRGRSDSRSRSPV 139
SRS + R SRS SP+
Sbjct: 192 LSRSLAINR--SRSASPI 207
>gi|221221358|gb|ACM09340.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
FAFVEF DPRDA DA L+GR + GSR+ VE + G + RGPPP R
Sbjct: 52 FAFVEFEDPRDATDAVRELDGRTLSGSRVRVELS-------NGEKRTRNRGPPPSWSR 102
>gi|344264100|ref|XP_003404132.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Loxodonta
africana]
Length = 387
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+V+F D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 177 RGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 220
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+V+F D R+A+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 51 RGFAYVQFEDVREAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|221219360|gb|ACM08341.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
FAFVEF DPRDA DA L+GR + GSR+ VE + G + RGPPP R
Sbjct: 52 FAFVEFEDPRDATDAVRELDGRTLSGSRVRVELS-------NGEKRTRNRGPPPSWSR 102
>gi|410919787|ref|XP_003973365.1| PREDICTED: uncharacterized protein LOC101077437 [Takifugu
rubripes]
Length = 1490
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 58
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP
Sbjct: 51 FAFVEFEDPRDASDAVRELDGRTMCGCRVRVELSTGEKR----SR---SRGPPP 97
>gi|328876774|gb|EGG25137.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 297
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 25/72 (34%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF+EF + RDADDA +LN E+A+G G + +CF
Sbjct: 40 FAFIEFKERRDADDAMKALN-----------EWAKG--------------GKAVVNNKCF 74
Query: 65 NCGIDGHWARDC 76
C +GHW+++C
Sbjct: 75 TCNQEGHWSKEC 86
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K F FVEF D RDADDA Y LNG+++ R+ +E AR
Sbjct: 35 LKNGFGFVEFDDHRDADDAVYELNGKELCSERVTIEHAR 73
>gi|147903707|ref|NP_001088237.1| serine/arginine-rich splicing factor 12 [Xenopus laevis]
gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis]
Length = 251
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+++F D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 51 RGFAYIQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|403166701|ref|XP_003326577.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166678|gb|EFP82158.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 258
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
F F+E+ RDA+DA + LNGRD G R+IVEFA+ PRG
Sbjct: 41 FGFLEYDSVRDAEDAVHDLNGRDFMGERLIVEFAK-APRG 79
>gi|403376343|gb|EJY88148.1| hypothetical protein OXYTRI_18935 [Oxytricha trifallax]
Length = 208
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
K +AF+EF D RDA+DA LNGR+ G R+ +E+++ R +
Sbjct: 31 FKGSYAFIEFKDERDAEDALTELNGREFSGQRLAIEWSKKSGRFDAANASRGRGRDSRDR 90
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 103
G G D +DC + CG+ GH R+C+ S K
Sbjct: 91 GSDRGRGGDRGGNKDC---------FNCGKPGHFARDCRQSKK 124
>gi|347441721|emb|CCD34642.1| similar to zinc knuckle domain-containing protein [Botryotinia
fuckeliana]
Length = 206
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 48 SREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKK 104
+RE RGPP +C+NC GH +RDC G + CYRCG GHI ++C N P +
Sbjct: 26 ARECPSRGPP----KCYNCDNPGHLSRDCPEGPKEKVCYRCGTSGHISKDCSNPPTE 78
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 59 GSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSY 110
GS CF+CG GH +RDC G KCY CGE GH+ R+C + R R Y
Sbjct: 137 GSQTCFSCGGYGHLSRDCTQG---QKCYNCGEVGHLSRDCSQETSEAR-RCY 184
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 44/94 (46%), Gaps = 21/94 (22%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDA+DA L+GR + G R+ VE + G R RG P
Sbjct: 53 FAFVEFEDPRDAEDAVRGLDGRSICGRRVRVELSNAGSRKGAYRGGPPRRGRPFHP---- 108
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
++KCY CG+RGH R+C
Sbjct: 109 -----------------EDKCYECGDRGHYARDC 125
>gi|409079907|gb|EKM80268.1| hypothetical protein AGABI1DRAFT_113469 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 423
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K + FVEF A+++ N G++I VE + GG G + ++ G
Sbjct: 101 LKVGYGFVEFDTREAAEESVAKYNEGHFMGNKIKVEISHGG----GRTAKFAG-----DP 151
Query: 61 GRCFNCGIDGHWARDC 76
G CF CG GHWAR+C
Sbjct: 152 GACFRCGQMGHWAREC 167
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 28/43 (65%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
+K F FVEF D RDADDA L+GRD G R+IVE A G R
Sbjct: 33 LKNGFGFVEFDDVRDADDAMRDLHGRDFMGDRLIVERANSGGR 75
>gi|426198327|gb|EKV48253.1| hypothetical protein AGABI2DRAFT_191883 [Agaricus bisporus var.
bisporus H97]
Length = 426
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K + FVEF A+++ N G++I VE + GG G + ++ G
Sbjct: 104 LKVGYGFVEFDTREAAEESVAKYNEGHFMGNKIKVEISHGG----GRTAKFAG-----DP 154
Query: 61 GRCFNCGIDGHWARDC 76
G CF CG GHWAR+C
Sbjct: 155 GACFRCGQMGHWAREC 170
>gi|145552234|ref|XP_001461793.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429629|emb|CAK94420.1| unnamed protein product [Paramecium tetraurelia]
Length = 186
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA---RGGPRGPGGSREYLGRGPPP 58
K ++F+ FS+ +A +A +NG +G ++ V+ +G GP S E
Sbjct: 41 KGSYSFITFSNEDEAKEALTEMNGATYNGQKLKVDVVDNRKGRRNGPNESDE-------- 92
Query: 59 GSGRCFNCGIDGHWARDC 76
CF CG GHWARDC
Sbjct: 93 ----CFKCGKGGHWARDC 106
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K F FVEF D RDA+DA + LNG+++ G R+I+++++
Sbjct: 34 LKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSK 72
>gi|431904517|gb|ELK09900.1| Splicing factor, arginine/serine-rich 5 [Pteropus alecto]
Length = 223
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE 36
+KR F FVEF DPRDADDA Y L+G+++ R+ +E
Sbjct: 35 LKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIE 70
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
+K+ F FVEF DPRDA+DA Y L+G+++ R+ +E A
Sbjct: 35 LKKGFGFVEFDDPRDAEDAVYELDGKELCNERVTIEHA 72
>gi|145515315|ref|XP_001443557.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410946|emb|CAK76160.1| unnamed protein product [Paramecium tetraurelia]
Length = 186
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA---RGGPRGPGGSREYLGRGPP 57
K ++F+ FS+ +A +A +NG +G ++ V+ +G GP S E
Sbjct: 40 YKGSYSFITFSNEDEAKEALTEMNGTTHNGQKLKVDVVDNRKGRRTGPNESDE------- 92
Query: 58 PGSGRCFNCGIDGHWARDCKAG 79
CF CG GHWARDC G
Sbjct: 93 -----CFKCGRGGHWARDCPKG 109
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
FAFVEF DPRDA+DA ++ +G D DG R+ VEF RG
Sbjct: 47 FAFVEFEDPRDAEDAAHARDGYDYDGYRLRVEFPRG 82
>gi|393247796|gb|EJD55303.1| hypothetical protein AURDEDRAFT_109681 [Auricularia delicata
TFB-10046 SS5]
Length = 523
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K + FVEF A+++ + G++I VE +RG +G +G PG+
Sbjct: 121 LKFGYGFVEFETQEAAEESVAKYHEGWFMGNKIKVEISRGRNKG---------KGDQPGA 171
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGH 93
CF CG GHWAR+C G N GH
Sbjct: 172 --CFKCGQMGHWARECPHGGGTNGVSHHNGVGH 202
>gi|66814388|ref|XP_641373.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60469429|gb|EAL67423.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 412
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 43/126 (34%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K +AFVEF + + A DA ++ VDG +I+VE + G + P
Sbjct: 206 VKNGYAFVEFDNEKSARDAIEEMHDSIVDGEKILVEKSHSGKKHPD-------------- 251
Query: 61 GRCFNCGIDGHWARDC---------------------------KAGDWKNK-CYRCGERG 92
CF C GHWAR C + G +N+ C+ C G
Sbjct: 252 -ECFICRGRGHWARSCPKGGRGRDGRDRDYRDNRDRDRDREREREGHLRNRTCFTCNGVG 310
Query: 93 HIERNC 98
HI ++C
Sbjct: 311 HIAKDC 316
>gi|281200716|gb|EFA74934.1| hypothetical protein PPL_11968 [Polysphondylium pallidum PN500]
Length = 254
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 63 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNS 101
CFNCG GH +RDC G C++CG+ GHI R+C S
Sbjct: 120 CFNCGKTGHMSRDCTQGGSSAGCFKCGKTGHISRDCTES 158
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 48 SREYL-GRGPPPGSGRCFNCGIDGHWARDC-----KAGDWKNKCYRCGERGHIERNCQN 100
SRE G G G CFNCG GH +R+C AG+ CY CG GHI R C N
Sbjct: 49 SRECTQGGGSDRGGNNCFNCGKPGHISRECPDGAAGAGNT-GSCYNCGNTGHISRECPN 106
>gi|308509716|ref|XP_003117041.1| CRE-RSP-1 protein [Caenorhabditis remanei]
gi|308241955|gb|EFO85907.1| CRE-RSP-1 protein [Caenorhabditis remanei]
Length = 308
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K F FVEF D RDA+DA + LNG+++ G R+I+++++
Sbjct: 34 LKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSK 72
>gi|17535711|ref|NP_496442.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
gi|56749460|sp|Q23121.1|RSP1_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 1;
AltName: Full=CeSRp75; AltName: Full=RNA-binding
protein srp-5
gi|3880429|emb|CAA91395.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
Length = 312
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K F FVEF D RDA+DA + LNG+++ G R+I+++++
Sbjct: 34 LKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSK 72
>gi|384948768|gb|AFI37989.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
Length = 164
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+K F FVEF D RDA+DA + LNG+++ G R+I+++++
Sbjct: 34 LKNGFGFVEFDDKRDAEDAVHDLNGKELGGDRVILDYSK 72
>gi|355748508|gb|EHH52991.1| hypothetical protein EGM_13542 [Macaca fascicularis]
Length = 164
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|328767259|gb|EGF77309.1| hypothetical protein BATDEDRAFT_32353 [Batrachochytrium
dendrobatidis JAM81]
Length = 179
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 13/74 (17%)
Query: 5 FAFVEFSDPRDADDARYS--LNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
F FVE+ D RDA++A + + +G+++ VE+A+ G R GG R S
Sbjct: 39 FGFVEYEDKRDAEEAVKAGQETEFEFNGAKMYVEWAKAGGR-RGGER----------SDG 87
Query: 63 CFNCGIDGHWARDC 76
CF CG GHWAR+C
Sbjct: 88 CFKCGETGHWAREC 101
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 28/100 (28%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR--------------------- 43
FAFVEF DPRDADD+ L+G + G+R+ VE + G R
Sbjct: 68 FAFVEFEDPRDADDSVRGLDGSSLCGTRVRVELSTGKVRPKPWMRRGPPGRDGGRDGDRG 127
Query: 44 -------GPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 76
G GG R P + RCF CG GH+A DC
Sbjct: 128 RDGGRDGGRGGGDRDRSRRPFDPADRCFECGGRGHYAYDC 167
>gi|281209187|gb|EFA83362.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 503
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
M++ F FVEF+D A A +L+ +++DGS+++VEF G
Sbjct: 180 MRKTFCFVEFTDAEQATKALEALHKKEIDGSKLVVEFVTG 219
>gi|357609122|gb|EHJ66310.1| arginine/serine-rich splicing factor 7 [Danaus plexippus]
Length = 174
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS-GRC 63
FAFVEF DPRDA+DA L+GR + G R VE + GG G R PP RC
Sbjct: 45 FAFVEFEDPRDAEDAIRGLDGRTICGRRARVEMSNGGRGYGGRGPPPRSRLPPRPYDDRC 104
Query: 64 FNCGIDGHWARDC 76
++CG GH+ARDC
Sbjct: 105 YDCGDRGHYARDC 117
>gi|296487190|tpg|DAA29303.1| TPA: splicing factor, arginine/serine-rich 3-like [Bos taurus]
Length = 164
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|4506901|ref|NP_003008.1| serine/arginine-rich splicing factor 3 [Homo sapiens]
gi|8567402|ref|NP_038691.1| serine/arginine-rich splicing factor 3 [Mus musculus]
gi|77736345|ref|NP_001029872.1| serine/arginine-rich splicing factor 3 [Bos taurus]
gi|114145746|ref|NP_001041372.1| splicing factor, arginine/serine-rich 3 [Rattus norvegicus]
gi|305855200|ref|NP_001182245.1| serine/arginine-rich splicing factor 3 [Ovis aries]
gi|307078119|ref|NP_001182483.1| splicing factor, arginine/serine-rich 3 [Gallus gallus]
gi|307078159|ref|NP_001182496.1| splicing factor, arginine/serine-rich 3 [Pongo abelii]
gi|350538573|ref|NP_001232578.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|114607174|ref|XP_001173216.1| PREDICTED: uncharacterized protein LOC747921 isoform 5 [Pan
troglodytes]
gi|126309787|ref|XP_001370000.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Monodelphis domestica]
gi|149732155|ref|XP_001499880.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|296198029|ref|XP_002746526.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Callithrix jacchus]
gi|301756971|ref|XP_002914334.1| PREDICTED: splicing factor, arginine/serine-rich 3-like
[Ailuropoda melanoleuca]
gi|326933663|ref|XP_003212920.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Meleagris
gallopavo]
gi|332255653|ref|XP_003276947.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 1
[Nomascus leucogenys]
gi|332255655|ref|XP_003276948.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 2
[Nomascus leucogenys]
gi|332823925|ref|XP_003311314.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|338717417|ref|XP_003363635.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|344263812|ref|XP_003403989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
gi|345778693|ref|XP_532124.3| PREDICTED: serine/arginine-rich splicing factor 3 [Canis lupus
familiaris]
gi|348576314|ref|XP_003473932.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cavia
porcellus]
gi|350586583|ref|XP_003482220.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
gi|395534031|ref|XP_003769052.1| PREDICTED: serine/arginine-rich splicing factor 3 [Sarcophilus
harrisii]
gi|395832270|ref|XP_003789196.1| PREDICTED: serine/arginine-rich splicing factor 3 [Otolemur
garnettii]
gi|397496243|ref|XP_003818951.1| PREDICTED: serine/arginine-rich splicing factor 3 [Pan paniscus]
gi|402866823|ref|XP_003897573.1| PREDICTED: serine/arginine-rich splicing factor 3 [Papio anubis]
gi|403261702|ref|XP_003923252.1| PREDICTED: serine/arginine-rich splicing factor 3 [Saimiri
boliviensis boliviensis]
gi|410040712|ref|XP_003950873.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410040714|ref|XP_003950874.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410959034|ref|XP_003986117.1| PREDICTED: serine/arginine-rich splicing factor 3 [Felis catus]
gi|426352928|ref|XP_004043955.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352930|ref|XP_004043956.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352932|ref|XP_004043957.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352934|ref|XP_004043958.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|441648624|ref|XP_004090899.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648629|ref|XP_004090900.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648632|ref|XP_004090901.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|51338672|sp|P84103.1|SRSF3_HUMAN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Protein X16; AltName: Full=Splicing factor,
arginine/serine-rich 3
gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|5531904|gb|AAD44523.1|AF107405_1 pre-mRNA splicing factor [Homo sapiens]
gi|55440|emb|CAA37821.1| X16 [Mus musculus]
gi|338484|gb|AAA36648.1| pre-mRNA splicing factor [Homo sapiens]
gi|2125863|emb|CAA62844.1| splicing factor [Mus musculus]
gi|12654193|gb|AAH00914.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|12847924|dbj|BAB27762.1| unnamed protein product [Mus musculus]
gi|26347593|dbj|BAC37445.1| unnamed protein product [Mus musculus]
gi|30582873|gb|AAP35663.1| splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|45768791|gb|AAH68111.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|46362469|gb|AAH69018.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|47940164|gb|AAH71196.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|53734444|gb|AAH83316.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|60655009|gb|AAX32068.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|60655011|gb|AAX32069.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|74137380|dbj|BAE22040.1| unnamed protein product [Mus musculus]
gi|74139940|dbj|BAE31808.1| unnamed protein product [Mus musculus]
gi|74179670|dbj|BAE22483.1| unnamed protein product [Mus musculus]
gi|74181349|dbj|BAE29950.1| unnamed protein product [Mus musculus]
gi|74203068|dbj|BAE26230.1| unnamed protein product [Mus musculus]
gi|74216995|dbj|BAE26606.1| unnamed protein product [Mus musculus]
gi|74222015|dbj|BAE26830.1| unnamed protein product [Mus musculus]
gi|74226734|dbj|BAE27015.1| unnamed protein product [Mus musculus]
gi|74354685|gb|AAI02736.1| Splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|90076534|dbj|BAE87947.1| unnamed protein product [Macaca fascicularis]
gi|90080349|dbj|BAE89656.1| unnamed protein product [Macaca fascicularis]
gi|109692284|gb|ABG37970.1| unknown [Rattus norvegicus]
gi|119624306|gb|EAX03901.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|119624308|gb|EAX03903.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|148690659|gb|EDL22606.1| mCG21131, isoform CRA_d [Mus musculus]
gi|149043499|gb|EDL96950.1| rCG61099, isoform CRA_c [Rattus norvegicus]
gi|165875525|gb|ABY68590.1| pre-mRNA splicing factor SRP20-like protein [Ovis aries]
gi|189069112|dbj|BAG35450.1| unnamed protein product [Homo sapiens]
gi|197127497|gb|ACH43995.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|197692159|dbj|BAG70043.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|197692405|dbj|BAG70166.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|261860472|dbj|BAI46758.1| splicing factor, arginine/serine-rich 3 [synthetic construct]
gi|296474519|tpg|DAA16634.1| TPA: splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|349603122|gb|AEP99052.1| Splicing factor, arginine/serine-rich 3-like protein [Equus
caballus]
gi|351701484|gb|EHB04403.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
gi|380815558|gb|AFE79653.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|383420725|gb|AFH33576.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|410221336|gb|JAA07887.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410221338|gb|JAA07888.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410357561|gb|JAA44572.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|417396397|gb|JAA45232.1| Putative serine/arginine-rich splicing factor 3 [Desmodus
rotundus]
gi|431916817|gb|ELK16577.1| Splicing factor, arginine/serine-rich 3 [Pteropus alecto]
Length = 164
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|30584291|gb|AAP36394.1| Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic
construct]
gi|61371593|gb|AAX43696.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|61371598|gb|AAX43697.1| splicing factor arginine/serine-rich 3 [synthetic construct]
Length = 165
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
+K F FVEF D RDADDA Y LNG+++ R+ +E A
Sbjct: 35 LKNGFGFVEFDDHRDADDAVYELNGKELCSERVTIEHA 72
>gi|442762043|gb|JAA73180.1| Putative e3 ubiquitin ligase, partial [Ixodes ricinus]
Length = 179
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 57 PPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL 105
PP +C+ C GH+ARDCK + +++CYRC GHI ++CQ+ P ++
Sbjct: 89 PPIREKCYKCNRIGHFARDCK--EAEDRCYRCNGTGHISKDCQHGPDEM 135
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 63 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
C+NCG GH AR+CK + + CY C ++GHI R+C+
Sbjct: 137 CYNCGKMGHIARECK--EQEKTCYICHKQGHISRDCE 171
>gi|327271253|ref|XP_003220402.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Anolis
carolinensis]
Length = 164
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|354472430|ref|XP_003498442.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
Length = 167
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
F FV+F DPRDA DA L+G+ + G R+ +E + G R L RGPPP G+
Sbjct: 48 FVFVKFEDPRDATDAVRELDGKRLSGCRVKMELSNGEKRS-------LNRGPPPSWGQ 98
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 27/37 (72%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
FAFVEF DPRDA+DA +G + DG RI VEF RGG
Sbjct: 50 FAFVEFEDPRDAEDAVKGRDGHEFDGYRIRVEFPRGG 86
>gi|12844972|dbj|BAB26569.1| unnamed protein product [Mus musculus]
Length = 164
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
R FA+V+F+D DA+DA+ ++GR V G I V+FA+G + PG R
Sbjct: 52 RGFAYVQFADIHDAEDAQEGMDGRKVCGRFIDVQFAKGDRKSPGSMR 98
>gi|345564451|gb|EGX47414.1| hypothetical protein AOL_s00083g507 [Arthrobotrys oligospora ATCC
24927]
Length = 196
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 63 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQN 100
C+NCG DGH +R+C++ + CYRCG+ GHI R C N
Sbjct: 42 CYNCGQDGHLSRECQSPPKEKSCYRCGQTGHISRECTN 79
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 63 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
C++CG GH +RDC G KCY CG+ GH+ R+C
Sbjct: 136 CYSCGGFGHMSRDCTQGQ---KCYNCGQIGHLSRDC 168
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 63 CFNCGIDGHWARDC-KAGDWKNKCYRCGERGHIERNCQNSPKK 104
C+NCG GH A+DC K G+ CY CG+ GH+ R CQ+ PK+
Sbjct: 21 CYNCGGSGHQAKDCPKRGN--PVCYNCGQDGHLSRECQSPPKE 61
>gi|145497457|ref|XP_001434717.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401845|emb|CAK67320.1| unnamed protein product [Paramecium tetraurelia]
Length = 191
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA---RGGPRGPGGSREYLGRGPPPGSG 61
++FV FS+ ++A +A S NG+ +G ++ V+ +G GP
Sbjct: 44 YSFVTFSNEQEAQEALKSTNGQTYNGQKLKVDVVDNRKGRKTGPNEE------------D 91
Query: 62 RCFNCGIDGHWARDC 76
+CF C GHWAR+C
Sbjct: 92 KCFKCNKGGHWARNC 106
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE 36
+K F FVEF D RDADDA Y LNG+++ R+ +E
Sbjct: 35 LKNGFGFVEFEDHRDADDAVYELNGKELCNERVTIE 70
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
FAFVEF DPRDA DA L+GR + G R+ VE + G + RGPPP R
Sbjct: 52 FAFVEFEDPRDATDAVRELDGRTLSGCRVRVELS-------NGEKRTRSRGPPPSWSR 102
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAFVEF DPRDA DA L+GR + G R+ VE + G R RGPPP G
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRNR-------NRGPPPSWG 97
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 22/94 (23%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF D RDA+DA L+GR + G R+ VE + G R P
Sbjct: 45 FAFVEFEDVRDAEDAVRGLDGRTICGRRVRVELSTGKSRNRFRGPPPRRGRPFHP----- 99
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
+++CY CGERGH R+C
Sbjct: 100 -----------------EDRCYECGERGHYARDC 116
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FVEFSDP+DA++AR+SL+G + G I V+FA+ G
Sbjct: 70 RGLGFVEFSDPKDAEEARHSLDGSTLAGRVISVQFAQHG 108
>gi|395334012|gb|EJF66388.1| hypothetical protein DICSQDRAFT_123087 [Dichomitus squalens
LYAD-421 SS1]
Length = 503
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K + FVEF A+++ + G++I VE + GG R + +Y G
Sbjct: 147 LKVGYGFVEFDSREAAEESVAKYHEGYFMGNKIRVEISHGGGR----TAKYSGD-----P 197
Query: 61 GRCFNCGIDGHWARDC 76
G CF CG GHWAR+C
Sbjct: 198 GACFKCGQMGHWAREC 213
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRDA+DA Y +G D DG R+ VEF
Sbjct: 56 FAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|52346014|ref|NP_001005054.1| serine/arginine-rich splicing factor 3 [Xenopus (Silurana)
tropicalis]
gi|49900231|gb|AAH76942.1| splicing factor, arginine serine-rich 3 [Xenopus (Silurana)
tropicalis]
gi|89266750|emb|CAJ83969.1| splicing factor, arginine/serine-rich 3 [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 58
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPP 94
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
R F FVEF DP+DA+ A +NG ++DG+RI V A+ G P
Sbjct: 53 RGFGFVEFYDPKDAEQALKEMNGSEIDGNRIEVFVAQKGRSDP 95
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Monodelphis domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRDA+DA Y +G D DG R+ VEF
Sbjct: 56 FAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRDA+DA Y +G D DG R+ VEF
Sbjct: 55 FAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 87
>gi|242010923|ref|XP_002426207.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
gi|212510258|gb|EEB13469.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
Length = 173
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 21/95 (22%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF DPRDADDA L+GR V G R+ VE P +G
Sbjct: 49 FAFVEFEDPRDADDAVRGLDGRTVCGRRVRVE---------------------PSNGMGG 87
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
G R + + ++CY CGERGH R+C
Sbjct: 88 RRRDRGPPPRRGRPFNPDDRCYECGERGHYARDCN 122
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
R F FVEF D RDA+DA YSL+ ++G I V F+R G + P
Sbjct: 58 RGFGFVEFKDTRDAEDAMYSLDRSTINGREISVTFSREGRKTP 100
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRDADDA ++ +G D DG R+ VEF
Sbjct: 47 FAFVEFEDPRDADDAVHARDGYDYDGYRLRVEF 79
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like
[Taeniopygia guttata]
Length = 277
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE 36
+K F FVEF D RDADDA Y LNG+++ R+ +E
Sbjct: 35 LKNGFGFVEFEDHRDADDAIYELNGKELCDERVTIE 70
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
R F FVEF DP+DA+ A +NG ++DG+RI V A+ G P
Sbjct: 53 RGFGFVEFYDPKDAEQALKEMNGSEIDGNRIEVFVAQKGRSDP 95
>gi|145533360|ref|XP_001452430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420118|emb|CAK85033.1| unnamed protein product [Paramecium tetraurelia]
Length = 189
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 15/75 (20%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRI---IVEFARGGPRGPGGSREYLGRGPPPGSG 61
++FV FS+ ++A DA + NG+ +G ++ +V+ +G GP
Sbjct: 44 YSFVTFSNEQEAQDALKATNGQTYNGQKLKVDVVDNKKGRKTGPNDE------------D 91
Query: 62 RCFNCGIDGHWARDC 76
+CF C GHWAR+C
Sbjct: 92 KCFKCSKGGHWARNC 106
>gi|432959076|ref|XP_004086176.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Oryzias
latipes]
Length = 168
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 58
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP
Sbjct: 52 FAFVEFEDPRDASDAVRELDGRTMCGCRVRVELSTGEKR----SRS---RGPPP 98
>gi|41151986|ref|NP_958480.1| splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|31418757|gb|AAH53132.1| Splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|37681977|gb|AAQ97866.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
Length = 163
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 58
FAFVEF DPRDA DA L+GR + G R+ VE + G R +R RGPPP
Sbjct: 47 FAFVEFEDPRDATDAVRELDGRTLCGCRVRVELSNGEKR----TRS---RGPPP 93
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 14/65 (21%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA--------------RGGPRGPGGS 48
R FAFVEF DP +A +A+Y +NG+ G I V A R GP G GG
Sbjct: 92 RGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGR 151
Query: 49 REYLG 53
R + G
Sbjct: 152 RSHYG 156
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA--------------------RGGP 42
R FAFV F P DA DA +NG+ +DG I VE A RG P
Sbjct: 49 RGFAFVTFESPADAKDAAREMNGKSLDGKPIKVEQATKPQFESAGRRGPPSNYSRSRGPP 108
Query: 43 RGPGGSR--EYLGRGPPPGSGRCFNCGI 68
RGP GSR RGPP GSG F G+
Sbjct: 109 RGPRGSRGGPSGMRGPPRGSGDPFFKGM 136
>gi|409051294|gb|EKM60770.1| hypothetical protein PHACADRAFT_246886 [Phanerochaete carnosa
HHB-10118-sp]
Length = 447
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K + FVEF A+++ + G++I VE + GG R S +
Sbjct: 98 LKVGYGFVEFDSREAAEESVAKYHEGFFMGNKIRVELSHGGGRTAKYSND---------P 148
Query: 61 GRCFNCGIDGHWARDC 76
G CF CG GHWAR+C
Sbjct: 149 GACFKCGQVGHWAREC 164
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
+AFVEF D RDA+DA + +G D DG R+ VE A GG
Sbjct: 47 YAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGG 83
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
+AFVEF D RDA+DA + +G D DG R+ VE A GG
Sbjct: 47 YAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGG 83
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
+AFVEF D RDA+DA + +G D DG R+ VE A GG R
Sbjct: 47 YAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRR 85
>gi|348521764|ref|XP_003448396.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Oreochromis
niloticus]
Length = 168
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
FAFVEF DPRDA DA L+GR + G R+ VE + G R SR RGPPP R
Sbjct: 52 FAFVEFEDPRDASDAVRELDGRTMCGCRVRVELSTGEKR----SRS---RGPPPSWSR 102
>gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7
[Schistosoma japonicum]
gi|226472076|emb|CAX77076.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472078|emb|CAX77077.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472080|emb|CAX77078.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472082|emb|CAX77079.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472084|emb|CAX77080.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 169
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR-----------------GPGG 47
FAFVEF D DA DA L+G + G R VE + G R GPG
Sbjct: 48 FAFVEFEDAADASDAVRELDGTVMCGVRARVELSTGKSRQKPWVRGGARNGGGRDNGPGS 107
Query: 48 SREYLGRGPPPGSGRCFNCGIDGHWARDC 76
R P + RC+ CG GH+A DC
Sbjct: 108 RR----MKPFDPADRCYECGERGHYAYDC 132
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
FAFV+F DPRDADDA S++GRD G RI VE A
Sbjct: 41 FAFVDFEDPRDADDAIRSMDGRDFLGGRIRVELA 74
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRDA+DA Y +G D DG R+ VEF
Sbjct: 56 FAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|432898455|ref|XP_004076510.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 222
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
FAFV+F DPRDA+DA Y +G D DG R+ VEF R
Sbjct: 55 FAFVQFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 89
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG 59
R F FVEF DP+DA+ A +NG ++DG+R+ V A+ G P R G P G
Sbjct: 53 RGFGFVEFYDPKDAEVALKEMNGAEIDGNRVEVFVAQKGRSDPRVMRYKEKGGIPQG 109
>gi|442751175|gb|JAA67747.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 164
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAF EF DPRDA DA L+GR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFAEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA----RGGPRGPGGSREYLGRGPPPGS 60
FAFVEF D RDA+D+ L+GR + G R VE + G RG GRG PP S
Sbjct: 46 FAFVEFEDARDAEDSVRGLDGRTICGRRARVELSTGKGGRGLRGGDRGGGDRGRGGPPSS 105
Query: 61 G--------RCFNCGIDGHWARDC 76
RC+ CG GH+ARDC
Sbjct: 106 KSGRFHPDDRCYECGGRGHYARDC 129
>gi|56681248|gb|AAW21258.1| gag protein [Simian immunodeficiency virus]
Length = 527
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 62 RCFNCGIDGHWARDCKA--------GDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRS 113
RC+NCG GH A++C A G CY+CG+ GHI + C ++ +S+
Sbjct: 409 RCYNCGKFGHIAKNCPAPPRQKVPPGT----CYKCGKPGHIAKQCSSAQANFLGKSFLGK 464
Query: 114 PSPRRG 119
P RG
Sbjct: 465 IPPVRG 470
>gi|291231291|ref|XP_002735598.1| PREDICTED: RNA binding motif protein 4B-like isoform 1
[Saccoglossus kowalevskii]
Length = 238
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+ +++ FV +A +A +LN ++ G+ I VE S + + P GS
Sbjct: 40 VIKNYGFVHMDKEDEAKEALDALNSKEFMGTNIKVEL----------STSRVHKTPGMGS 89
Query: 61 -GRCFNCGIDGHWARDC 76
G CF CG GHW+RDC
Sbjct: 90 KGECFKCGRQGHWSRDC 106
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
FAFVEF DPRDA+DA +G + DG+R+ VE A GG
Sbjct: 113 FAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGG 149
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
F F+E+ RDA+DA + LNGR+ G R+IVEFA+
Sbjct: 41 FGFLEYDQVRDAEDAVHDLNGREFMGDRLIVEFAK 75
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DP+DA+DA Y +G D DG R+ VEF
Sbjct: 56 FAFVEFEDPQDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|403351671|gb|EJY75331.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
gi|403370539|gb|EJY85135.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 343
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRD-VDGSRIIVEFARGGPRGPGGSREYLGRGPPPG 59
+K ++AF+++ + DA A +NG+ V+G + VE + PGG + G P
Sbjct: 125 LKHNYAFIDYENHEDAVAALREMNGKTFVNGEELAVEQSV-----PGGKKRKSG---PKR 176
Query: 60 SGRCFNCGIDGHWARDC 76
C+NC GHWA +C
Sbjct: 177 EDVCYNCQKPGHWANEC 193
>gi|432856730|ref|XP_004068509.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 1
[Oryzias latipes]
Length = 166
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
FAFVEF DPRDA DA L+GR + G R+ VE + G R
Sbjct: 47 FAFVEFEDPRDATDAVRELDGRTLCGCRVRVELSNGEKR 85
>gi|291231293|ref|XP_002735599.1| PREDICTED: RNA binding motif protein 4B-like isoform 2
[Saccoglossus kowalevskii]
Length = 237
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+ +++ FV +A +A +LN ++ G+ I VE S + + P GS
Sbjct: 40 VIKNYGFVHMDKEDEAKEALDALNSKEFMGTNIKVEL----------STSRVHKTPGMGS 89
Query: 61 -GRCFNCGIDGHWARDC 76
G CF CG GHW+RDC
Sbjct: 90 KGECFKCGRQGHWSRDC 106
>gi|389751418|gb|EIM92491.1| hypothetical protein STEHIDRAFT_127304 [Stereum hirsutum FP-91666
SS1]
Length = 454
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K + FVEF A+++ + G++I VE +RGG G ++ G
Sbjct: 115 LKVGYGFVEFESREAAEESVAKYHEGFFMGNKIRVELSRGG----GRYAKFSGD-----P 165
Query: 61 GRCFNCGIDGHWARDC 76
G CF CG GHWAR+C
Sbjct: 166 GACFKCGQMGHWAREC 181
>gi|432857012|ref|XP_004068510.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Oryzias latipes]
Length = 182
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
FAFVEF DPRDA DA L+GR + G R+ VE + G R
Sbjct: 47 FAFVEFEDPRDATDAVRELDGRTLCGCRVRVELSNGEKR 85
>gi|405975539|gb|EKC40098.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 214
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
+AF+++ D RDA+DA NGR++ GS IIVE A+G PR
Sbjct: 47 YAFIDYEDHRDAEDAVRYENGREICGSSIIVERAKGAPR 85
>gi|198434018|ref|XP_002131881.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 5 [Ciona intestinalis]
Length = 273
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA------RGGPRGPGGSREYLGRGPPP 58
FA+V F D RDA DA L+G+ + ++ V+ + R RGP Y G G
Sbjct: 50 FAYVLFEDARDAKDAVRGLDGKIICDRKVRVDISNSRSTGRPARRGPAPYDRYGGGGGGG 109
Query: 59 GSG-----RCFNCGIDGHWARDC 76
G RC+NC GH+ARDC
Sbjct: 110 NRGFRSDMRCYNCSETGHFARDC 132
>gi|196009125|ref|XP_002114428.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583447|gb|EDV23518.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 247
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
FAFV F DP DA DA +L+GR + G+R+ VE ARG
Sbjct: 43 FAFVVFDDPLDAQDAVEALDGRRLCGARVRVEIARG 78
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
F FVEF P+DA++A ++ NG+ G+ I+VEFA+
Sbjct: 38 FGFVEFESPKDAEEAVHTFNGKSFMGANIVVEFAK 72
>gi|391339441|ref|XP_003744058.1| PREDICTED: uncharacterized protein LOC100905097 [Metaseiulus
occidentalis]
Length = 355
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
K ++AFVEF+D RDA DA LNG G RIIVE A
Sbjct: 35 KGNYAFVEFADERDARDAISELNGTSWKGERIIVELA 71
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+++F D RDA+DA ++L+ + V G +I ++FA+G + PG
Sbjct: 51 RGFAYIQFEDVRDAEDALHNLDRKWVCGRQIEIQFAQGDRKTPG 94
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
+ F EF D RDADDA Y LNG +++G RI VE A
Sbjct: 43 YGFCEFDDYRDADDAVYKLNGGELNGERITVEHA 76
>gi|256089259|ref|XP_002580730.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646106|emb|CCD59208.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 171
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF D DA DA L+G + G R VE + G R + ++ G +G
Sbjct: 48 FAFVEFEDAADASDAVRELDGTVMCGVRARVELSTGKSR----QKPWVRGGGGARNGGGR 103
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSRSR 124
+ GI +R K D ++CY CGERGH +C+ + P RR RSRS
Sbjct: 104 DNGIG---SRRMKPFDPTDRCYECGERGHYAYDCRRRGGGPGGPNGRSRPEGRR-RSRSV 159
Query: 125 S 125
S
Sbjct: 160 S 160
>gi|392597031|gb|EIW86353.1| hypothetical protein CONPUDRAFT_133797 [Coniophora puteana
RWD-64-598 SS2]
Length = 453
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K F FVEF A+++ N G++I VE + SR + +
Sbjct: 115 LKTGFGFVEFDSREAAEESVAKYNEGYFMGNKIRVELSH--------SRGRITKHVSSDP 166
Query: 61 GRCFNCGIDGHWARDCKAGD 80
CF CG GHWAR+C GD
Sbjct: 167 SACFKCGQPGHWARECPNGD 186
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG--- 61
FAFVEF D RDA+D+ L+GR V G R+ VE + G G G G
Sbjct: 50 FAFVEFDDARDAEDSVRGLDGRTVCGRRVRVELSTGKGGRGFRGGGGGGGGGGGGGPPRG 109
Query: 62 -----------RCFNCGIDGHWARDC 76
RC+ CG GH+ARDC
Sbjct: 110 KGGRGAFNPDDRCYECGGRGHYARDC 135
>gi|355561641|gb|EHH18273.1| hypothetical protein EGK_14839 [Macaca mulatta]
Length = 164
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
FAFVEF DPRDA DA L+GR + G R+ VE + G R
Sbjct: 48 FAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKR 86
>gi|145525601|ref|XP_001448617.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416172|emb|CAK81220.1| unnamed protein product [Paramecium tetraurelia]
Length = 192
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
++FV F+ +A +A NG +G ++ V+ G P S CF
Sbjct: 44 YSFVTFNSETEAQEALKETNGMTYNGQKLKVDIVDNRKSRKTG---------PSDSDLCF 94
Query: 65 NCGIDGHWARDC 76
C GHWARDC
Sbjct: 95 KCSKGGHWARDC 106
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
F FVEF RDA+DA + NG++ GS I+VEFA+
Sbjct: 38 FGFVEFESSRDAEDAMQNFNGKNFMGSNIVVEFAK 72
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDLKTPNQMKAKEGRN 103
>gi|390595888|gb|EIN05292.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 230
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
+AFVEF RDA+DA Y L+GR +G+R+ +++A+ P
Sbjct: 47 YAFVEFRSTRDAEDAYYDLHGRSFEGARLSIQWAKNPP 84
>gi|403419203|emb|CCM05903.1| predicted protein [Fibroporia radiculosa]
Length = 200
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
+AFVEF RDA+DA Y ++GR +GSR+ +++A+ P
Sbjct: 47 YAFVEFRSQRDAEDAYYDMHGRHFEGSRLSIQWAKNPP 84
>gi|392563435|gb|EIW56614.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 206
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
+AFVEF RDA+DA Y ++GR +GSR+ +++A+ P
Sbjct: 47 YAFVEFRSQRDAEDAYYDMHGRSFEGSRLSIQWAKNPP 84
>gi|357119205|ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE------------FARGGPRGPGGSR 49
R F FV FSDPR + A ++ +++DG I V ++ GG RG
Sbjct: 47 HRGFGFVTFSDPRAVESAISEMHTKELDGRTISVNRAEPKMNTDDTRYSSGGDRGADRGD 106
Query: 50 EYLGRGPPPGSGRCFNCGIDGHWARDC 76
G+G P G C+ CG GHWARDC
Sbjct: 107 YRGGKGDGPPPGNCYQCGRAGHWARDC 133
>gi|402869670|ref|XP_003898873.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Papio
anubis]
Length = 164
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
FAF+EF DP DA DA L+GR + G R+ VE + G R SR RGPPP G
Sbjct: 48 FAFIEFEDPPDAADAVRELDGRTLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|145527274|ref|XP_001449437.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417025|emb|CAK82040.1| unnamed protein product [Paramecium tetraurelia]
Length = 191
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 15/75 (20%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA---RGGPRGPGGSREYLGRGPPPGSG 61
++FV FS+ +A +A NG+ +G ++ V+ +G GP
Sbjct: 44 YSFVTFSNESEAQEALKGTNGQSYNGQKLKVDVVDNRKGRKTGPNEE------------D 91
Query: 62 RCFNCGIDGHWARDC 76
+CF C GHWAR+C
Sbjct: 92 KCFKCNKGGHWARNC 106
>gi|71661039|ref|XP_817546.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|37931575|gb|AAP69224.1| SR RNA-binding protein [Trypanosoma cruzi]
gi|70882745|gb|EAN95695.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 413
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 23/102 (22%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
K+ FAFV F + +A A L+G +++GSR+ VE
Sbjct: 233 KKHFAFVGFPNE-EACGAALRLHGTELNGSRVDVE--------------------RRQRQ 271
Query: 62 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 103
RCF C +GH A C+A + C CG GH+ R+C++ P+
Sbjct: 272 RCFKCDREGHVALQCRA--VEPYCRNCGRNGHLSRDCRSGPR 311
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRD+ DA Y +G D DG R+ VEF
Sbjct: 55 FAFVEFEDPRDSGDAVYERDGYDYDGYRLRVEF 87
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSRE 50
R FAFV F D RDA DA +++G ++DG + V+ AR G R P SR+
Sbjct: 55 RGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYGRRDPPRSRQ 102
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|426241493|ref|XP_004014625.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Ovis
aries]
Length = 339
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y N + + G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYEPNAK-LCGERVIVEHARG 71
>gi|222623220|gb|EEE57352.1| hypothetical protein OsJ_07486 [Oryza sativa Japonica Group]
Length = 203
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 16/77 (20%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG---PGGSREYLGRGPPPGSG 61
FAF++F D RDA+DA L+G+ +G R+ + G RG GGS
Sbjct: 40 FAFIDFDDRRDAEDAIRDLDGK--NGWRVELSTKAGSGRGRDRSGGS-----------DM 86
Query: 62 RCFNCGIDGHWARDCKA 78
+C+ CG GH+AR+C+
Sbjct: 87 KCYECGEPGHFARECRL 103
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGR 54
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKEGR 102
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKCICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|426241491|ref|XP_004014624.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Ovis
aries]
Length = 344
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+K + FVEF D RDADDA Y N + + G R+IVE ARG
Sbjct: 33 LKNGYGFVEFEDSRDADDAVYEPNAK-LCGERVIVEHARG 71
>gi|115447241|ref|NP_001047400.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|75324099|sp|Q6K9C3.1|RZP23_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ23; AltName:
Full=RS-containing zinc finger protein 23;
Short=Os-RSZ23; Short=Os-RSZp23
gi|47497180|dbj|BAD19227.1| putative splicing factor RSZp22 (RSZP22) [Oryza sativa Japonica
Group]
gi|113536931|dbj|BAF09314.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|215704568|dbj|BAG94201.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737778|dbj|BAG96908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765616|dbj|BAG87313.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 16/77 (20%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG---PGGSREYLGRGPPPGSG 61
FAF++F D RDA+DA L+G+ +G R+ + G RG GGS
Sbjct: 40 FAFIDFDDRRDAEDAIRDLDGK--NGWRVELSTKAGSGRGRDRSGGS-----------DM 86
Query: 62 RCFNCGIDGHWARDCKA 78
+C+ CG GH+AR+C+
Sbjct: 87 KCYECGEPGHFARECRL 103
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE------FARGGPRGP 45
R FAFV F P DA DA +NG+ +DG I VE F GG RGP
Sbjct: 49 RGFAFVTFESPSDAKDAAREMNGKSLDGKNIKVEQATKPQFESGGRRGP 97
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 42/94 (44%), Gaps = 28/94 (29%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA--------------------RGGP 42
R FAFV F P DA DA +NG+ +DG I VE A RG P
Sbjct: 49 RGFAFVTFESPADAKDAAREMNGKSLDGKPIKVEQATKPQFESAGRRGPPSNYSRSRGPP 108
Query: 43 RGPGGSR--EYLGRGPP------PGSGRCFNCGI 68
RGP GSR RGPP PGSG F G+
Sbjct: 109 RGPRGSRGGPSGMRGPPRDYYDSPGSGDPFFKGM 142
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|357462657|ref|XP_003601610.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490658|gb|AES71861.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|388503978|gb|AFK40055.1| unknown [Medicago truncatula]
Length = 248
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F F++F DP DA DA+Y ++G+ + G I V FA
Sbjct: 82 RGFGFIQFVDPADAADAKYHMDGQVLLGREITVVFA 117
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGR 54
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKEGR 102
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKVKEGRN 103
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4
[Oryzias latipes]
Length = 344
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDG 30
+K + FVEF DPRDADDA Y LNG+++ G
Sbjct: 33 LKNGYGFVEFDDPRDADDAVYDLNGKELCG 62
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE------FARGGPRGP 45
R FAFV F P DA DA +NG+ +DG I VE F GG RGP
Sbjct: 49 RGFAFVTFESPSDAKDAAREMNGKSLDGKNIKVEQATKPQFESGGRRGP 97
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGR 54
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGR 102
>gi|145546793|ref|XP_001459079.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426902|emb|CAK91682.1| unnamed protein product [Paramecium tetraurelia]
Length = 192
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
++F+ F+ +A +A NG G ++ V+ G P S CF
Sbjct: 44 YSFITFNSENEAQEALKETNGMTYKGQKLKVDIVDNRKSRKTG---------PSDSDLCF 94
Query: 65 NCGIDGHWARDC 76
C GHWARDC
Sbjct: 95 KCNKGGHWARDC 106
>gi|226481264|emb|CAX79097.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 165
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
+AF+EF +PRDA+DA Y ++ G I VEF RG + P R
Sbjct: 4 YAFIEFENPRDAEDAHYYMDHTRFMGRDIEVEFTRGYRKTPAEMR 48
>gi|363807232|ref|NP_001242100.1| uncharacterized protein LOC100779321 [Glycine max]
gi|255635455|gb|ACU18080.1| unknown [Glycine max]
Length = 253
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F FV+F DP DA DA+Y ++G+ + G + V FA
Sbjct: 82 RGFGFVQFVDPADAADAKYHMDGQVLLGRELTVVFA 117
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGR 54
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGR 102
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQIKAKEGRN 103
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE------FARGGPRGP 45
R FAFV F P DA DA +NG+ +DG I VE F GG RGP
Sbjct: 49 RGFAFVTFESPSDAKDAAREMNGKSLDGKNIKVEQATKPQFESGGRRGP 97
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
R FA+++F D RDA+DA +SL+ + V G +I ++FA+G + P
Sbjct: 51 RGFAYIQFEDVRDAEDALHSLDRKWVCGRQIEIQFAQGDRKTP 93
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRG 55
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRN 103
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 83/192 (43%), Gaps = 45/192 (23%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
R F FV++ DP DA DA++ ++G + G + V FA + P R GSGR
Sbjct: 77 RGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARER-----GSGR 131
Query: 63 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSR 122
H R + RG YSRSP+PR RSR
Sbjct: 132 Y-------HDRRRSPPRSPRYSRSPAQRRGR----------------YSRSPAPRHARSR 168
Query: 123 SRSYS------RGRSDSRSRSPV----KRDRSVERFERRTRSPRDSRSPK----RRRNSP 168
SRSY + R+ SRS SP R+RS R E R RS SRSP+ R R+
Sbjct: 169 SRSYDYASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRS--YSRSPRLDGSRSRSQS 226
Query: 169 PSSKGRKRSPTP 180
P+ G RSP+P
Sbjct: 227 PTQPG-SRSPSP 237
>gi|147899629|ref|NP_001079656.1| serine/arginine-rich splicing factor 10 [Xenopus laevis]
gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis]
Length = 258
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDKKWICGRQIEIQFAQGDRKTP 93
>gi|29841102|gb|AAP06115.1| similar to NM_080743 serine-arginine repressor protein (35 kDa)
in Homo sapiens [Schistosoma japonicum]
gi|226476576|emb|CAX72180.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481266|emb|CAX79098.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481268|emb|CAX79099.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481270|emb|CAX79100.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481274|emb|CAX79102.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481276|emb|CAX79103.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481278|emb|CAX79104.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481280|emb|CAX79105.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481282|emb|CAX79106.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481284|emb|CAX79107.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481286|emb|CAX79108.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481288|emb|CAX79109.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481292|emb|CAX79111.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481294|emb|CAX79112.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481300|emb|CAX79114.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481699|emb|CAX79115.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481701|emb|CAX79116.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
+AF+EF +PRDA+DA Y ++ G I VEF RG + P R
Sbjct: 49 YAFIEFENPRDAEDAHYYMDHTRFMGRDIEVEFTRGYRKTPAEMR 93
>gi|226476570|emb|CAX72177.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481290|emb|CAX79110.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481296|emb|CAX79113.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
+AF+EF +PRDA+DA Y ++ G I VEF RG + P R
Sbjct: 49 YAFIEFENPRDAEDAHYYMDHTRFMGRDIEVEFTRGYRKTPAEMR 93
>gi|717163|gb|AAA63801.1| tbRRM1 [Trypanosoma brucei brucei]
Length = 435
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 29/112 (25%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
++ FAFV F+D A A ++G ++DG R+ +E R+
Sbjct: 239 RKMFAFVGFADE-SACAAAIQMDGTEMDGHRVQIE-----------RRQ---------RQ 277
Query: 62 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRS 113
RCF C +GH A C+ + C CG GH+ R+C +++P SY R+
Sbjct: 278 RCFKCNKEGHVATQCRG---EPTCRTCGRPGHMARDC-----RMQPGSYDRN 321
>gi|115449145|ref|NP_001048352.1| Os02g0789400 [Oryza sativa Japonica Group]
gi|75324004|sp|Q6K4N0.1|RSZ21_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21; AltName:
Full=RS-containing zinc finger protein 21;
Short=Os-RSZ21; Short=Os-RSZp21
gi|47497051|dbj|BAD19103.1| putative Splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|47497773|dbj|BAD19873.1| putative Splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113537883|dbj|BAF10266.1| Os02g0789400 [Oryza sativa Japonica Group]
gi|215706489|dbj|BAG93345.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706955|dbj|BAG93415.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191722|gb|EEC74149.1| hypothetical protein OsI_09229 [Oryza sativa Indica Group]
gi|222623815|gb|EEE57947.1| hypothetical protein OsJ_08668 [Oryza sativa Japonica Group]
Length = 185
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 16/77 (20%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIV---EFARGGPRGPGGSREYLGRGPPPGSG 61
FAF++F D RDA+DA L+G+ +G R+ + +RGG GGS
Sbjct: 40 FAFIDFDDKRDAEDALRDLDGK--NGWRVELSRNSSSRGGRDRHGGSEM----------- 86
Query: 62 RCFNCGIDGHWARDCKA 78
+C+ CG GH+AR+C+
Sbjct: 87 KCYECGETGHFARECRL 103
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGS 48
+AFVEF DPRDA++A +G + DG R+ VE A GG RG GGS
Sbjct: 47 YAFVEFEDPRDAEEACAGRDGYNFDGHRLRVEPAHGG-RGNGGS 89
>gi|84043730|ref|XP_951655.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348604|gb|AAQ15929.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62359738|gb|AAX80169.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|261326568|emb|CBH09529.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 441
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 29/112 (25%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
++ FAFV F+D A A ++G ++DG R+ +E R+
Sbjct: 239 RKMFAFVGFAD-ESACAAAIQMDGTEMDGHRVQIE-----------RRQ---------RQ 277
Query: 62 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRS 113
RCF C +GH A C+ + C CG GH+ R+C +++P SY R+
Sbjct: 278 RCFKCNKEGHVATQCRG---EPTCRTCGRPGHMARDC-----RMQPGSYDRN 321
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
Length = 289
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFVEF DP DA +A+Y +N + V G I V A
Sbjct: 102 RGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLA 137
>gi|116782736|gb|ABK22635.1| unknown [Picea sitchensis]
Length = 275
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
R F FV+F DP+DA +A+Y ++G+ + G I V A + P R P G GR
Sbjct: 77 RGFGFVQFMDPQDAAEAQYHMDGQYIGGREITVVLAEKNRKKPDEMRVRTSARAPRGYGR 136
Query: 63 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSR 122
++ + ++ YR G R+ SP R YS SP R RS
Sbjct: 137 RRRSPHYARSRSRSRSLEHRSTSYRGG-----HRSRSYSPVPRRGHDYSVSPRDRHHRSP 191
Query: 123 SRSYSRGR 130
+ S+ R R
Sbjct: 192 TNSHDRDR 199
>gi|325190512|emb|CCA25010.1| WD40 repeatcontaining protein putative [Albugo laibachii Nc14]
Length = 1085
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 20/98 (20%)
Query: 40 GGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGD---------WKNK------ 84
GGP G GG+ GR PPP S C CG GHW DC D +K
Sbjct: 836 GGPNGVGGNS---GRRPPPESYTCNRCGTKGHWIDDCPTKDQVPGNGNGPYKKVPPEGYI 892
Query: 85 CYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSR 122
C RC GH +C + K+ P +Y+ ++G +
Sbjct: 893 CKRCNVPGHYLADCPQA--KIPPANYTCHKCRQKGHWK 928
>gi|62733241|gb|AAX95358.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLG 53
R FAFVEF+ DA ARY +N + + G I V FA + P R +G
Sbjct: 3 RGFAFVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMRRIIG 53
>gi|407866836|gb|EKG08410.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 423
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 23/102 (22%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
K+ FAFV F + A L+G +++GSR+ VE
Sbjct: 233 KKHFAFVGFPNEETCV-AALRLHGTELNGSRVDVE--------------------RRQRQ 271
Query: 62 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 103
RCF C +GH A C+A + C CG GH+ R+C++ P+
Sbjct: 272 RCFKCDREGHVALQCRA--VEPYCRNCGRNGHLSRDCRSGPR 311
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
Length = 304
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFVEF DP DA +A+Y +N + V G I V A
Sbjct: 117 RGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLA 152
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P
Sbjct: 51 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTP 93
>gi|72026975|ref|XP_787177.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 192
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 14/86 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG--------------GPRGPGGSRE 50
FAFV F D RDA DA +L+ R+V G R+ VE + G GG
Sbjct: 54 FAFVMFEDERDASDACKALDDRNVCGVRVRVEMSSGESRRSRDRGDRGGDRGHRGGGGFM 113
Query: 51 YLGRGPPPGSGRCFNCGIDGHWARDC 76
RG + RC+ CG GH+ARDC
Sbjct: 114 GGRRGGMRDNERCYECGQRGHFARDC 139
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa]
gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFVEF DP DA +A+Y +N + V G I V A
Sbjct: 78 RGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLA 113
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
R FA+++F D RDA+DA +SL+ + V G +I ++FA+G + P
Sbjct: 51 RGFAYIQFEDVRDAEDALHSLDRKWVCGRQIEIQFAQGDRKTP 93
>gi|448878427|gb|AGE46176.1| arginine/serine-rich splicing factor SCL42 transcript I
[Physcomitrella patens subsp. patens]
Length = 370
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F FV+F +PRDA +A+Y L+ + + G I V FA
Sbjct: 83 RGFGFVQFLEPRDAAEAQYCLDHQLIQGREITVVFA 118
>gi|226481272|emb|CAX79101.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
+AF+EF +PRDA+DA Y ++ G I VEF RG + P R
Sbjct: 49 YAFIEFGNPRDAEDAHYYMDHTRFMGRDIEVEFTRGYRKTPAEMR 93
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 23/34 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
FAFVEF DPRDA DA + +G D DG RI VE
Sbjct: 46 FAFVEFDDPRDARDAVHGRDGYDFDGCRIRVELT 79
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like
[Callithrix jacchus]
Length = 295
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G ++DG + V+ AR G
Sbjct: 55 RGFAFVRFHDQRDAEDAEAAMDGAELDGRELRVQVARYG 93
>gi|71414158|ref|XP_809191.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70873535|gb|EAN87340.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 419
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 23/102 (22%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
K+ FAFV F + A L+G +++GSR+ VE
Sbjct: 233 KKHFAFVGFPNEETCV-AALRLHGTELNGSRVDVE--------------------RRQRQ 271
Query: 62 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPK 103
RCF C +GH A C+A + C CG GH+ R+C++ P+
Sbjct: 272 RCFKCDREGHVALQCRA--VEPYCRNCGRNGHLSRDCRSGPR 311
>gi|115466838|ref|NP_001057018.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|75322869|sp|Q69KL9.1|RZ21A_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21A; AltName:
Full=RS-containing zinc finger protein 21A;
Short=Os-RSZ21a; Short=Os-RSZp21a
gi|51091721|dbj|BAD36521.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|55773877|dbj|BAD72462.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113595058|dbj|BAF18932.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|215686646|dbj|BAG88899.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701257|dbj|BAG92681.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 33/96 (34%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRII-VEFARGGPRGPGGSREYLGRGPPPGSGRC 63
FAF++F D RDA DA RD+DG VE +R G GG Y
Sbjct: 40 FAFIDFDDRRDAQDAI-----RDIDGKNGWRVELSRNASSGRGGRDRY------------ 82
Query: 64 FNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
G ++KCY CGE GH R C+
Sbjct: 83 ---------------GSSESKCYECGETGHFARECR 103
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLG 53
R FAFVEF+ DA ARY +N + + G I V FA + P R +G
Sbjct: 76 RGFAFVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMRRIIG 126
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLG 53
R FAFVEF+ DA ARY +N + + G I V FA + P R +G
Sbjct: 76 RGFAFVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMRRIIG 126
>gi|448878421|gb|AGE46173.1| arginine/serine-rich splicing factor SCL33 transcript I
[Physcomitrella patens subsp. patens]
Length = 286
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
+ R F FV+F +PRDA +A+Y L+ + + G I V FA
Sbjct: 95 LPRGFGFVQFLEPRDAAEAQYCLDHQLIAGREITVVFA 132
>gi|198438407|ref|XP_002126373.1| PREDICTED: similar to FUS interacting protein (serine-arginine
rich) 1 [Ciona intestinalis]
Length = 221
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
R FA+++F D RDA+DA Y+++ + + G I V+FA G + P R
Sbjct: 49 RGFAYIQFEDTRDAEDALYAMDRKWICGRYIEVQFAAGDRKTPNQMR 95
>gi|242092260|ref|XP_002436620.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|241914843|gb|EER87987.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|448878284|gb|AGE46105.1| arginine/serine-rich splicing factor RSZ21 transcript I [Sorghum
bicolor]
gi|448878288|gb|AGE46107.1| arginine/serine-rich splicing factor RSZ21 transcript III [Sorghum
bicolor]
Length = 186
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA+DA L+G+ +G R VE +R S +C+
Sbjct: 40 FAFIDFDDKRDAEDAIRDLDGK--NGWR--VELSRN-----ASSGRGGRDRYGGSESKCY 90
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 91 ECGETGHFARECRL 104
>gi|218197725|gb|EEC80152.1| hypothetical protein OsI_21961 [Oryza sativa Indica Group]
Length = 264
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 31/94 (32%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA DA ++G++ G R VE +R G GG Y
Sbjct: 119 FAFIDFDDRRDAQDAIRDIDGKN--GWR--VELSRNASSGRGGRDRY------------- 161
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
G ++KCY CGE GH R C
Sbjct: 162 --------------GSSESKCYECGETGHFAREC 181
>gi|47087341|ref|NP_998631.1| serine/arginine-rich splicing factor 6a [Danio rerio]
gi|32822789|gb|AAH55238.1| Splicing factor, arginine/serine-rich 6a [Danio rerio]
Length = 347
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDG 30
+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 33 LKNGYGFVEFEDTRDADDAVYELNGKELCG 62
>gi|222635100|gb|EEE65232.1| hypothetical protein OsJ_20394 [Oryza sativa Japonica Group]
Length = 264
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 31/94 (32%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA DA ++G++ G R VE +R G GG Y
Sbjct: 119 FAFIDFDDRRDAQDAIRDIDGKN--GWR--VELSRNASSGRGGRDRY------------- 161
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
G ++KCY CGE GH R C
Sbjct: 162 --------------GSSESKCYECGETGHFAREC 181
>gi|426193551|gb|EKV43484.1| hypothetical protein AGABI2DRAFT_195104 [Agaricus bisporus var.
bisporus H97]
Length = 210
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
+AFVEF RDA+DA Y ++GR +GSR+ +++A+ P
Sbjct: 47 YAFVEFRSGRDAEDAYYDMHGRYFEGSRLSIQWAKNPP 84
>gi|409075035|gb|EKM75421.1| hypothetical protein AGABI1DRAFT_116427 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 191
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
+AFVEF RDA+DA Y ++GR +GSR+ +++A+ P
Sbjct: 47 YAFVEFRSGRDAEDAYYDMHGRYFEGSRLSIQWAKNPP 84
>gi|403418011|emb|CCM04711.1| predicted protein [Fibroporia radiculosa]
Length = 328
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
F FVEF RDADDA NG+ G+ I+VEFA+
Sbjct: 38 FGFVEFESSRDADDAVRDFNGKAFMGANIVVEFAK 72
>gi|170583718|ref|XP_001896707.1| Zinc knuckle family protein [Brugia malayi]
gi|158596020|gb|EDP34440.1| Zinc knuckle family protein [Brugia malayi]
gi|402582762|gb|EJW76707.1| zinc knuckle family protein [Wuchereria bancrofti]
Length = 147
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 63 CFNCGIDGHWARDC-------KAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYS 111
C+ CG GH+AR+C AG KCY CG GHI R+C +S R Y+
Sbjct: 74 CYQCGGFGHFARECPTERRVGAAGGGNQKCYNCGRFGHISRDCPDSGSDQSKRCYN 129
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 59 GSGRCFNCGIDGHWARDC--KAGDWKNKCYRCGERGHIERNC 98
G+ +C+NCG GH +RDC D +CY C + GHI R C
Sbjct: 99 GNQKCYNCGRFGHISRDCPDSGSDQSKRCYNCQQIGHISREC 140
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF RDA DA L+GR V G R VE + G +Y G G G
Sbjct: 46 FAFVEFESARDAADAVRGLDGRTVCGRRARVELSTG---------KYARSGGGGGGGGGG 96
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQ 99
G G +KCY CG RGH R+C+
Sbjct: 97 GGGGGLGGRDRGGGGRGDDKCYECGGRGHFARHCR 131
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
F FVEF RDA+DA NG+ +G+ I++EFA+
Sbjct: 39 FGFVEFESTRDAEDALNHFNGKPFNGANIVIEFAK 73
>gi|443725386|gb|ELU13009.1| hypothetical protein CAPTEDRAFT_155905 [Capitella teleta]
Length = 204
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG---SG 61
FAF+ + DA+DA +NG +V G R+ A PR G R P G +
Sbjct: 75 FAFIVYKHKEDAEDAIRDMNGVEVSGHRVRCSLAL--PRSRGRKR-------PSGFDPNM 125
Query: 62 RCFNCGIDGHWARDC 76
RC++CG GH++RDC
Sbjct: 126 RCYSCGERGHFSRDC 140
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGR 54
R FA+V+F D RDA+DA ++L+ + + G +I ++FA+G + P + GR
Sbjct: 136 RGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGR 187
>gi|346469351|gb|AEO34520.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
R FA+V+F D RDA+DA YSL+ G + +EFA+G + P
Sbjct: 52 RGFAYVQFEDLRDAEDAMYSLDRTRFYGRELEIEFAQGDRKTP 94
>gi|198430457|ref|XP_002119659.1| PREDICTED: similar to splicing factor, arginine/serine-rich 3
[Ciona intestinalis]
Length = 185
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
FAFVEF D RDA+DA +L+GR V G R VE + G R
Sbjct: 49 FAFVEFEDNRDAEDAVRALDGRTVCGVRARVEMSSGQSR 87
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
FAF+EF DPRDA DA + +G D+DG RI VE
Sbjct: 46 FAFIEFDDPRDARDAVHGRDGYDMDGCRIRVEMT 79
>gi|443725388|gb|ELU13011.1| hypothetical protein CAPTEDRAFT_223451 [Capitella teleta]
Length = 154
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
FAF+E+ DPRDADDA SL+G + G R VE + G R
Sbjct: 50 FAFIEYEDPRDADDAVRSLDGSTICGVRARVEHSTGKVR 88
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF RDA DA L+GR V G R VE + G +Y G G G
Sbjct: 46 FAFVEFESARDAADAVRGLDGRTVCGRRARVELSTG---------KYARSGGGGGGGGGG 96
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
G G +KCY CG RGH R+C
Sbjct: 97 GGGGGLGGRDRGGGGRGDDKCYECGGRGHFARHC 130
>gi|340503359|gb|EGR29956.1| hypothetical protein IMG5_145470 [Ichthyophthirius multifiliis]
Length = 221
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 31/98 (31%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
MKR +AF+ + D A+DA ++ ++G +I+VE P G ++ RGP
Sbjct: 37 MKRSYAFITYDDYHSAEDAIRKMDKAVINGKQILVE--------PAGLKKIRPRGPQLD- 87
Query: 61 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
+KC++CG RGH C
Sbjct: 88 ----------------------DKCFKCGRRGHWANEC 103
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG-----PRGPG 46
FAFV+F DPRDA+DA +G D DG+R+ VE A GG PRG G
Sbjct: 571 FAFVDFEDPRDAEDAIRGRDGYDYDGARLRVEPANGGRRESAPRGSG 617
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
+ F+EF + RDA+DA +G D+DG R+ VE A GG
Sbjct: 47 YCFIEFENARDAEDAIRGRDGYDIDGHRLRVELAHGG 83
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
R F F+EF + RDA+DA Y+L+ V+G I V F+R G + P
Sbjct: 92 RGFGFIEFKETRDAEDAMYNLDRSVVNGREISVTFSREGRKTP 134
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVE+ D RDA+DA ++G+ + G+R+ VE + G R R + P + RC+
Sbjct: 52 FAFVEYEDARDAEDAVKGMDGKVLCGARVRVELSNGMSRKSRYGRPSRRQFDP--NDRCY 109
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSRSR 124
CG GH+A DC + R+ + + R SP + RSR
Sbjct: 110 QCGETGHYAYDCYRFSKRRSRRSRSGSRSRSRSRGRRYRSRSRSNERRYRSPSYSKRRSR 169
Query: 125 SYSRGRSD--SRSRSPVKRDRSVERFERRTRSP 155
S S SRSRSP R RS RR++SP
Sbjct: 170 S----GSPGRSRSRSPGGRSRSP---VRRSKSP 195
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RD +DA SL+G +DG + V+ AR G
Sbjct: 55 RGFAFVRFYDKRDCEDAMDSLDGYILDGRELRVQMARYG 93
>gi|407393450|gb|EKF26604.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 423
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 23/125 (18%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
K+ FAFV F + A L+G +++G R+ VE
Sbjct: 233 KKHFAFVGFPNEETC-GAALRLHGTELNGCRVDVE--------------------RRQRQ 271
Query: 62 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRS 121
RCF C +GH A C+A + C CG GH+ R+C++ P+ R R RR +
Sbjct: 272 RCFKCDREGHVALQCRA--VEPYCRNCGRNGHLSRDCRSGPRDNRRNQTDRREFDRRDYN 329
Query: 122 RSRSY 126
R Y
Sbjct: 330 DRREY 334
>gi|291409855|ref|XP_002721207.1| PREDICTED: neurofilament, heavy polypeptide 200kDa-like
[Oryctolagus cuniculus]
Length = 967
Score = 41.2 bits (95), Expect = 0.43, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 107 PRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRN 166
P ++SP+ + +++S + +S +++SPVK + +SP +++SP ++
Sbjct: 496 PEEEAKSPAEAKSPEKAKSPAEAKSPEKAKSPVKEEAKSPESPAEVKSPAEAKSPAEAKS 555
Query: 167 -----SPPSSKGRKRSPTP---DERSPQDQRSP-SPRDRRQANGSEYSGSPRGKSRSPVD 217
SP +K +++ +P + +SP+ +SP + +A E + SP +
Sbjct: 556 PEKAKSPAEAKSPEKAKSPVKEEAKSPEKAKSPVEVKSPAEAKSPEKAKSPVKEEAKSPA 615
Query: 218 DADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSP 252
+A PE +SP +E +S ++ SPV + +SP
Sbjct: 616 EAKSPE--KAKSPVKEEAKSPEKAKSPVKEEAKSP 648
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 90/171 (52%), Gaps = 18/171 (10%)
Query: 95 ERNCQNSPKKLRPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRD-RSVERFER--R 151
E SP +++ + ++SP+ + +++S + +S +++SPVK + +S E+ +
Sbjct: 531 EAKSPESPAEVKSPAEAKSPAEAKSPEKAKSPAEAKSPEKAKSPVKEEAKSPEKAKSPVE 590
Query: 152 TRSPRDSRSPKRRRN-------SPPSSKGRKRSPTP---DERSPQDQRSPSPRDRRQANG 201
+SP +++SP++ ++ SP +K +++ +P + +SP+ +SP + +A
Sbjct: 591 VKSPAEAKSPEKAKSPVKEEAKSPAEAKSPEKAKSPVKEEAKSPEKAKSPV---KEEAKS 647
Query: 202 SEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSP 252
E + SP + + A PE +SP +E +S ++ SPV + +SP
Sbjct: 648 PEKAKSPVKEEAKSPEKAKSPE--KAKSPVKEEAKSPEKAKSPVKEEAKSP 696
>gi|431915005|gb|ELK15824.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 390
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAF+ F +P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFITFENPEDAKDATKDMNGKSLDGKLIKVEQA 84
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+AFVEFS +AD+A+ SLN G I VE+ RG G S + RGPP +
Sbjct: 43 YAFVEFSKEEEADNAQSSLNSTHFMGRDIRVEYTRGLRYSTGDS---IRRGPPRRTDYRI 99
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGH 93
H +C D K+ R G G+
Sbjct: 100 EV---THLPHNCSWQDLKDYMSRIGPVGY 125
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP 45
R FA+V+F D RDA+DA YSL+ G + +EFA+G + P
Sbjct: 73 RGFAYVQFEDLRDAEDAMYSLDRTRFYGRELEIEFAQGDRKTP 115
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA DA +++G ++DG + V+ AR G
Sbjct: 55 RGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA DA +++G ++DG + V+ AR G
Sbjct: 55 RGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|327261517|ref|XP_003215576.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Anolis
carolinensis]
Length = 261
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 3 RDFAFVE-----FSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 46
R FA+++ F D RDA+DA Y+LN + V G +I ++FA+G + P
Sbjct: 51 RGFAYIQYPLFMFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPN 99
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum
bicolor]
gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II [Sorghum
bicolor]
Length = 213
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
F F+++ DP DA DA+Y ++G+ + G I V FA
Sbjct: 80 FGFIQYFDPEDASDAKYHMDGQMLLGREITVVFA 113
>gi|372863947|gb|AEX99749.1| putative serine/arginine-rich protein SCL subfamily member
[Saccharum hybrid cultivar]
Length = 209
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F FV++ +P DA DA+Y ++G+ V G +I V FA
Sbjct: 78 RGFGFVQYYEPDDAADAKYYMDGQVVLGRQITVVFA 113
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
R FAFV F D RDA DA L G+D+DG I V++AR
Sbjct: 53 RGFAFVRFHDKRDAGDAIDDLAGKDLDGREIRVDYAR 89
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
+AFVEF D DA DA +G D DG R+ VE A GG
Sbjct: 47 YAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGG 83
>gi|357160417|ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium
distachyon]
Length = 295
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFVEF DP DA +A+Y +N + G I V A
Sbjct: 106 RGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLA 141
>gi|449273171|gb|EMC82779.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 417
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 7 FVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 1 FVEFDDVRDADDAVYELNGKDLCGERVIVEHARG 34
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F FV+F DP DA DA++ ++G + G + V FA
Sbjct: 77 RGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFA 112
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYL 52
R FAFVEF+ PRDA +A + +G D +G R+ VEF R GG R L
Sbjct: 53 RPFAFVEFNSPRDAHNAVHGRDGYDYEGYRLRVEFPRNYRAIYGGGRGLL 102
>gi|448878401|gb|AGE46163.1| arginine/serine-rich splicing factor RSZ23 transcript III
[Physcomitrella patens subsp. patens]
Length = 209
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF+EF D RDADDA +LNG+ +G R+ + + GG GP G +C+
Sbjct: 40 FAFIEFEDRRDADDAIRALNGK--NGWRVELSRSSGGGGGPRGRGG--------DDMKCY 89
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 90 ECGEPGHFARECRL 103
>gi|313242504|emb|CBY34644.1| unnamed protein product [Oikopleura dioica]
Length = 197
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
F +VEF DPRDA DA L+GR V G R+ VE +
Sbjct: 49 FGYVEFEDPRDAKDAIRDLDGRTVFGRRLKVELS 82
>gi|313226285|emb|CBY21429.1| unnamed protein product [Oikopleura dioica]
Length = 197
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
F +VEF DPRDA DA L+GR V G R+ VE +
Sbjct: 49 FGYVEFEDPRDAKDAIRDLDGRTVFGRRLKVELS 82
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 218 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 253
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG-PRGPGGSREYLGRGPPP 58
R FAFV F D RDA+DA +++G +DG + V+ AR G P SR RGPPP
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSR----RGPPP 107
>gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|77556878|gb|ABA99674.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|215694562|dbj|BAG89555.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617335|gb|EEE53467.1| hypothetical protein OsJ_36595 [Oryza sativa Japonica Group]
Length = 263
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFVEF DP DA +A+Y +N + G I V A
Sbjct: 78 RGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLA 113
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG-PRGPGGSREYLGRGPPP 58
R FAFV F D RDA+DA +++G +DG + V+ AR G P SR RGPPP
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSR----RGPPP 107
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
F FV+FSD RDADDA +G D DG RI VE
Sbjct: 47 FGFVQFSDSRDADDAVRGRDGYDFDGKRIRVELT 80
>gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum]
Length = 305
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
R + FVEF RD A +LNGR +DG+R++ + RG
Sbjct: 142 RGYCFVEFEHERDMHAAVKALNGRKIDGARVVTDVERG 179
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
FAF+EF DPRDA DA + +G D DG RI VE
Sbjct: 46 FAFIEFDDPRDARDAVHGRDGYDFDGCRIRVELT 79
>gi|358059659|dbj|GAA94591.1| hypothetical protein E5Q_01243 [Mixia osmundae IAM 14324]
Length = 294
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K + FVEF + A DA N G++I VE ++ P ++ G G
Sbjct: 55 LKSGYGFVEFGTEQHALDAVSKYNDGHFLGAQIKVEVSKR----PRFRQQENGLG----- 105
Query: 61 GRCFNCGIDGHWARDC 76
CF CG HWAR+C
Sbjct: 106 --CFKCGETSHWAREC 119
>gi|19113190|ref|NP_596398.1| pre-mRNA-splicing factor srp1 [Schizosaccharomyces pombe 972h-]
gi|6175051|sp|Q10193.3|SRP1_SCHPO RecName: Full=Pre-mRNA-splicing factor srp1
gi|3560199|emb|CAA20690.1| SR family protein, human SRFS2 ortholog Srp1 [Schizosaccharomyces
pombe]
Length = 275
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVD--GSRIIVEFARGGP 42
R FAFVE+ D RDA+DA Y ++GR ++ G + VE+A+ P
Sbjct: 47 RPFAFVEYEDSRDAEDAYYEVHGRRLERGGGVLRVEWAKQPP 88
>gi|448878397|gb|AGE46161.1| arginine/serine-rich splicing factor RSZ23 transcript I
[Physcomitrella patens subsp. patens]
Length = 210
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF+EF D RDADDA +LNG+ +G R+ + + GG GP G +C+
Sbjct: 40 FAFIEFEDRRDADDAIRALNGK--NGWRVELSRSSGGGGGPRGRGG--------DDMKCY 89
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 90 ECGEPGHFARECRL 103
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
R FA+++F D RDA+DA ++L+ + V G +I ++FA+G
Sbjct: 51 RGFAYIQFEDVRDAEDALHNLDRKWVCGRQIEIQFAQG 88
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFVEF DP DA +A+Y +N + G I V A
Sbjct: 78 RGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLA 113
>gi|168048201|ref|XP_001776556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672147|gb|EDQ58689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF+EF D RDADDA +LNG+ +G R+ + + GG GP G +C+
Sbjct: 40 FAFIEFEDRRDADDAIRALNGK--NGWRVELSRSSGGGGGPRGRGG--------DDMKCY 89
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 90 ECGEPGHFARECRL 103
>gi|115473547|ref|NP_001060372.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|33146902|dbj|BAC79901.1| putative SC35-like splicing factor SCL30a [Oryza sativa Japonica
Group]
gi|113611908|dbj|BAF22286.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|215692446|dbj|BAG87866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F FV++ DP DA DA+Y ++G+ + G + V FA
Sbjct: 79 RGFGFVQYYDPDDAADAKYYMDGQVILGREVAVVFA 114
>gi|334183335|ref|NP_001185236.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195103|gb|AEE33224.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 300
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F FV+F DP DA DA++ ++G + G + V FA
Sbjct: 89 RGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFA 124
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG-PRGPGGSREYLGRGPPP--- 58
R FAFV F D RDA+DA +++G +DG + V+ AR G P SR RGPPP
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSR----RGPPPRRY 110
Query: 59 GSG 61
GSG
Sbjct: 111 GSG 113
>gi|242079627|ref|XP_002444582.1| hypothetical protein SORBIDRAFT_07g023975 [Sorghum bicolor]
gi|241940932|gb|EES14077.1| hypothetical protein SORBIDRAFT_07g023975 [Sorghum bicolor]
Length = 837
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 56 PPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSP- 114
PP GRCF C DGH DC + +CY C GH C PR+ R P
Sbjct: 182 PPELEGRCFRCLRDGHTKADCT---FPERCYNCRSEGHKVAACPLPLHAGVPRAKRRRPA 238
Query: 115 --SPRRGRSRSRSYSRG 129
SP R R + SRG
Sbjct: 239 SSSPTRQRRVLQRLSRG 255
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA DA +++G ++DG + V+ AR G
Sbjct: 55 RGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA DA +++G ++DG + V+ AR G
Sbjct: 55 RGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA DA +++G ++DG + V+ AR G
Sbjct: 55 RGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE------FARGGPRGP 45
R FAFV F P DA DA +NG+ +DG I VE F G RGP
Sbjct: 49 RGFAFVTFESPADAKDAAREMNGKSLDGKPIKVEQATKPQFESAGRRGP 97
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA DA +++G ++DG + V+ AR G
Sbjct: 55 RGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|194385978|dbj|BAG65364.1| unnamed protein product [Homo sapiens]
Length = 352
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 10 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 45
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F FV+F DP DA DA++ ++G + G + V FA
Sbjct: 77 RGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFA 112
>gi|296471214|tpg|DAA13329.1| TPA: RNA binding motif protein, X-linked isoform 2 [Bos taurus]
Length = 352
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 10 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 45
>gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays]
gi|195637558|gb|ACG38247.1| SR repressor protein [Zea mays]
Length = 258
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFVEF DP DA +A+Y +N + G I V A
Sbjct: 79 RGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLA 114
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F FV+F DP DA DA++ ++G + G + V FA
Sbjct: 77 RGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFA 112
>gi|410904228|ref|XP_003965594.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Takifugu
rubripes]
Length = 227
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
FAF+ F DPRDADDA Y NG S++ VE+ R
Sbjct: 44 FAFIRFEDPRDADDAVYGRNGYVYGDSKLRVEYPR 78
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA DA +++G ++DG + V+ AR G
Sbjct: 45 RGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 83
>gi|410919593|ref|XP_003973268.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Takifugu
rubripes]
Length = 173
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
FAFVEF D RDA DA L+GR + G R+ VE + G R
Sbjct: 55 FAFVEFEDSRDATDAVRELDGRTLCGCRVRVEHSSGEKR 93
>gi|218200082|gb|EEC82509.1| hypothetical protein OsI_26989 [Oryza sativa Indica Group]
Length = 216
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F FV++ DP DA DA+Y ++G+ + G + V FA
Sbjct: 82 RGFGFVQYYDPDDAADAKYYMDGQVILGREVAVVFA 117
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAQDAARDMNGKSLDGKAIKVEQA 84
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDG 30
+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 88 IKNGYGFVEFDDYRDADDAVYELNGKELLG 117
>gi|449437054|ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
gi|449515555|ref|XP_004164814.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
Length = 192
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
+AF++F DPRDA DA + L+G+ +G R VE + G GG +C+
Sbjct: 40 YAFIDFDDPRDARDAIHELDGK--NGWR--VELSHNSRGGGGGRGGGGRGRSGGSDLKCY 95
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 96 ECGEPGHFARECRL 109
>gi|194699092|gb|ACF83630.1| unknown [Zea mays]
gi|448878224|gb|AGE46075.1| arginine/serine-rich splicing factor SCL30 transcript I [Zea mays]
Length = 258
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFVEF DP DA +A+Y +N + G I V A
Sbjct: 79 RGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLA 114
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 58
R FAFV F D RDA+DA +++G +DG + V+ AR G R P Y RGPPP
Sbjct: 55 RGFAFVRFLDKRDAEDAMDAMDGALLDGRELRVQMARYG-RPP--DSMYSRRGPPP 107
>gi|32352198|dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
Length = 232
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFVEF DP DA +A+Y +N + G I V A
Sbjct: 47 RGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLA 82
>gi|448878226|gb|AGE46076.1| arginine/serine-rich splicing factor SCL30 transcript II [Zea mays]
Length = 259
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFVEF DP DA +A+Y +N + G I V A
Sbjct: 79 RGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLA 114
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
R F F++F DP DA +A++ ++G + G + V FA + P R RG
Sbjct: 78 RGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPTEMRT-RDRG------- 129
Query: 63 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC-QNSPKKLRPRSYSRSPSPRRGRS 121
G + ++ ++ R R+C NSP R +S S SP RR
Sbjct: 130 ----GRSNRFQDRRRSPPRYSRSPPRRGRRSRSRSCGYNSPPAKRHQSRSVSPQDRR-YE 184
Query: 122 RSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPD 181
+ RSYSR + SR R S R + +RSPR S SP++ R+ P + R +SP
Sbjct: 185 KERSYSRSPPHNGSRV---RSGSPGRVKSHSRSPRRSVSPRKNRSYTP-EQARSQSPV-- 238
Query: 182 ERSPQDQRSPSPRDRRQANG 201
P+ RSP+P R NG
Sbjct: 239 ---PRQSRSPTPVPRGAQNG 255
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA DA +++GR +DG + V+ AR G
Sbjct: 56 RGFAFVRFYDKRDAQDALDAMDGRMLDGRELRVQMARYG 94
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
+AFVEF D +DA+DA +G D DG R+ VE A GG
Sbjct: 47 YAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG 83
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GRDVDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGP 96
>gi|402860841|ref|XP_003894827.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
Length = 391
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
G-like 1; AltName: Full=RNA binding motif protein, X
chromosome retrogene; Contains: RecName: Full=RNA
binding motif protein, X-linked-like-1, N-terminally
processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RD +DA +L+G +DG + V+ AR G
Sbjct: 40 RGFAFVRFYDKRDCEDAMDALDGYMMDGRELRVQMARYG 78
>gi|294898606|ref|XP_002776298.1| splice factor, putative [Perkinsus marinus ATCC 50983]
gi|239883208|gb|EER08114.1| splice factor, putative [Perkinsus marinus ATCC 50983]
Length = 358
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
++ FVE+ D RDA+DA + VDG+ + +++A+ GPR
Sbjct: 56 KNICFVEYDDERDAEDAYRGMASARVDGNTLNLQWAKAGPR 96
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
+AFVEF D +DA+DA +G D DG R+ VE A GG
Sbjct: 47 YAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG 83
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|449498359|ref|XP_004175818.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 2
[Taeniopygia guttata]
Length = 385
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea
mays]
Length = 270
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GRDVDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGP 96
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea
mays]
Length = 264
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GRDVDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGP 96
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea
mays]
Length = 254
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GRDVDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGP 96
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu
rubripes]
Length = 225
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFFDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|326924314|ref|XP_003208374.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Meleagris gallopavo]
Length = 385
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform
1 [Anolis carolinensis]
Length = 384
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|222637522|gb|EEE67654.1| hypothetical protein OsJ_25252 [Oryza sativa Japonica Group]
Length = 388
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F FV++ DP DA DA+Y ++G+ + G + V FA
Sbjct: 254 RGFGFVQYYDPDDAADAKYYMDGQVILGREVAVVFA 289
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GRDVDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGP 96
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RD +DA +L+G +DG + V+ AR G
Sbjct: 55 RGFAFVRFYDKRDCEDAMDALDGYMMDGRELRVQMARYG 93
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding
motif protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKSIKVEQA 84
>gi|146164777|ref|XP_001014027.2| hypothetical protein TTHERM_00399550 [Tetrahymena thermophila]
gi|146145658|gb|EAR93782.2| hypothetical protein TTHERM_00399550 [Tetrahymena thermophila
SB210]
Length = 309
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 27/39 (69%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+ + +AFV F + RDA+DA+ ++ +D+ G I VE+++
Sbjct: 86 IMQKYAFVSFKEVRDAEDAKKQMHKKDLGGLLITVEWSK 124
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 50 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 85
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA DA +++GR +DG + V+ AR G
Sbjct: 56 RGFAFVRFYDKRDAQDALDAMDGRMLDGRELRVQMARYG 94
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 96 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 131
>gi|291228272|ref|XP_002734102.1| PREDICTED: transformer-2 sex-determining protein, putative-like
[Saccoglossus kowalevskii]
Length = 204
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
FAFVEF DPRDA D+ L+GR + G R+ VE + G
Sbjct: 50 FAFVEFEDPRDASDSVRGLDGRVICGRRVRVEQSSG 85
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea
mays]
Length = 274
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GRDVDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGP 96
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GRDVDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGP 96
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE------FARGGPRG 44
R FAF+ F P DA DA +NG+ +DG I VE F GG RG
Sbjct: 49 RGFAFITFESPADAKDAARDMNGKSLDGKSIKVEQATKPSFESGGRRG 96
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 121 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 159
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea
mays]
Length = 256
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GRDVDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGP 96
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGS 48
R FAFV F D DA DA +++G +DG + V+ AR G R GS
Sbjct: 55 RGFAFVRFHDWSDAQDAEAAMDGAVLDGRELRVQVARYGRRDLSGS 100
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding
motif protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR+VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAVEKLDGRNVDGREIMVQFAKYGP 96
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
FAFV F DPRDA+DA Y NG + S++ VE+ R
Sbjct: 44 FAFVRFEDPRDAEDAVYGRNGYGLGDSKLRVEYPR 78
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
F FVEF RDA+DA NG+ G+ ++VEFA+
Sbjct: 38 FGFVEFESSRDAEDALNHFNGKPFMGTNLVVEFAK 72
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLG 53
R FAFVEF+ DA ARY +N + + G I V FA + P R +G
Sbjct: 438 RGFAFVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMRRIIG 488
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
+ F+EF D RDA+DA +G + DG+R+ VE A GG
Sbjct: 47 YCFIEFEDARDAEDAIRGRDGYNFDGNRLRVELAHGG 83
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding
motif protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GRDVDG I+V+FA+ GP
Sbjct: 94 RGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGP 133
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAILDGRELRVQMARYG 93
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
FAFVEF R+ADDAR +L+G +DG I V FA+
Sbjct: 275 FAFVEFRSEREADDARRNLDGVRIDGRDIRVVFAQ 309
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLG 53
R FAFVEF+ DA ARY +N + + G I V FA + P R +G
Sbjct: 372 RGFAFVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMRRIIG 422
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKSIKVEQA 84
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RD +DA +L+G +DG + V+ AR G
Sbjct: 55 RGFAFVRFYDKRDCEDAMDALDGYMMDGRELRVQMARYG 93
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
R FAFV + +A A L+GR+VDG I+V+FA+ GP R
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEATQR 103
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAAREMNGKSLDGKPIKVEQA 84
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|452847630|gb|EME49562.1| hypothetical protein DOTSEDRAFT_68367 [Dothistroma septosporum
NZE10]
Length = 893
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 14/94 (14%)
Query: 110 YSRSPSPRRGRSRSRSYSRGR---SDSRSRSPVKRDR--SVERFERRTRSPRDSR----- 159
YSRSP PRR RS SRS SR R S ++RSP++R+R SV ++ ++RS S
Sbjct: 784 YSRSP-PRRVRSDSRSVSRPRGKGSSGKARSPLERNRIGSVSSYDSQSRSRSRSPPRHAP 842
Query: 160 SPKRRRNSPPSSKGRKRSPT---PDERSPQDQRS 190
+PKRRRN+ R RSPT P E++P+D+ S
Sbjct: 843 APKRRRNTSSPESVRPRSPTRRKPVEKAPEDELS 876
>gi|242072186|ref|XP_002446029.1| hypothetical protein SORBIDRAFT_06g000673 [Sorghum bicolor]
gi|241937212|gb|EES10357.1| hypothetical protein SORBIDRAFT_06g000673 [Sorghum bicolor]
Length = 542
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 19/97 (19%)
Query: 56 PPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC-----QNSPKKLRPRSY 110
PP GRCF C DGH DC + +CY C GH C P+ R R
Sbjct: 109 PPELEGRCFRCLRDGHTKADCT---FPERCYNCRSEGHKVAACPLPLHAGVPRAKRRRPA 165
Query: 111 SRSPS---------PRRGRSRSR--SYSRGRSDSRSR 136
S SP+ PR GRSR+ + S G S +R R
Sbjct: 166 SSSPTRQRRVLQRLPRGGRSRASADTVSAGSSPARLR 202
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
FAFVEF R+A+DAR +L+G +DG I V FA
Sbjct: 50 FAFVEFRSEREAEDARRNLDGVRIDGRDIRVVFA 83
>gi|168061025|ref|XP_001782492.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666045|gb|EDQ52711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF+EF D RDADDA +LNG+ +G R+ + + GG GP G +C+
Sbjct: 40 FAFIEFEDRRDADDAIRALNGK--NGWRVELSRSSGGGGGPRGRGG--------DDMKCY 89
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 90 ECGEPGHFARECRL 103
>gi|332809466|ref|XP_003339040.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|332809468|ref|XP_003308251.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|426330271|ref|XP_004026144.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 3
[Gorilla gorilla gorilla]
gi|426330273|ref|XP_004026145.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 4
[Gorilla gorilla gorilla]
Length = 391
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|297279100|ref|XP_002801676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform
1 [Macaca mulatta]
gi|297279102|ref|XP_002801677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform
2 [Macaca mulatta]
Length = 391
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAILDGRELRVQMARYG 93
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV + +A A L+GR+VDG I+V+FA+ G
Sbjct: 57 RGFAFVRYKYADEAQKAIERLDGREVDGRHIVVQFAKYG 95
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 75 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 110
>gi|21361809|ref|NP_062556.2| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|242117971|ref|NP_001156008.1| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|74760797|sp|Q96E39.1|RMXL1_HUMAN RecName: Full=RNA binding motif protein, X-linked-like-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
G-like 1; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15277908|gb|AAH12942.1| Cysteine conjugate-beta lyase 2 [Homo sapiens]
gi|57997143|emb|CAI46148.1| hypothetical protein [Homo sapiens]
gi|119593561|gb|EAW73155.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|119593562|gb|EAW73156.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|208967733|dbj|BAG72512.1| cysteine conjugate-beta lyase 2 [synthetic construct]
Length = 390
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 58
R FAFV F D RDA+DA +++G +DG + V+ AR G R P Y RG PP
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGALLDGRELRVQMARYG-RPPDA--HYSRRGAPP 107
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 50 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 85
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like
[Oreochromis niloticus]
Length = 241
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
FAFV F DPRDADDA Y NG S++ VE+ R
Sbjct: 44 FAFVRFEDPRDADDAVYGRNGYGYGDSKLRVEYPR 78
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGR 54
R FA+V+F D RDA+DA +L+ + + G ++ ++FA+G + P + GR
Sbjct: 51 RGFAYVQFEDVRDAEDALRNLDRKWICGRQMEIQFAQGDRKTPNQMKAKEGR 102
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR+VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGP 96
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAF+ F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFITFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|221128969|ref|XP_002161622.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Hydra
magnipapillata]
Length = 277
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 58
+K++F F++F D RDA+ A N R + GS + VE+ARG + G GPPP
Sbjct: 34 LKKNFGFIQFEDRRDAEIAIQKENNRRLLGSDMTVEWARGTV-----GDKMRGNGPPP 86
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR+VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAVDRLDGRNVDGRNIMVQFAKYGP 96
>gi|291224719|ref|XP_002732349.1| PREDICTED: rbp1-like RNA-binding protein PB-like [Saccoglossus
kowalevskii]
Length = 247
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
FAF+EF P+DAD A SL+G+ V GSR+ VE +
Sbjct: 42 FAFLEFDSPKDADVAVRSLDGKSVCGSRVRVEIS 75
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Mus musculus]
Length = 241
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|115454617|ref|NP_001050909.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|31712074|gb|AAP68379.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|108710427|gb|ABF98222.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113549380|dbj|BAF12823.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|215692670|dbj|BAG88090.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692827|dbj|BAG88216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625569|gb|EEE59701.1| hypothetical protein OsJ_12125 [Oryza sativa Japonica Group]
Length = 308
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREY---------- 51
R F FV FSDP D A ++ +++DG I V A P+ Y
Sbjct: 47 HRGFGFVTFSDPEAVDSAIKEMHCQELDGRTISVNKAE--PKMNTDDTRYESGGGRGEYR 104
Query: 52 LGRGPPPGSGRCFNCGIDGHWARDC 76
GRG P G CF CG GHWARDC
Sbjct: 105 GGRGDGPPPGNCFECGRAGHWARDC 129
>gi|402576825|gb|EJW70782.1| hypothetical protein WUBG_18310 [Wuchereria bancrofti]
Length = 153
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
FAF+EF DPRDA DA + +G D DG RI VE
Sbjct: 60 FAFIEFDDPRDARDAVHGRDGYDFDGCRIRVELT 93
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Oreochromis niloticus]
Length = 218
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG-PRGPGGSREYLGRGPPP 58
R FAFV F D RDA+DA +++G +DG + V+ AR G P SR RGPPP
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSR----RGPPP 107
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|218193515|gb|EEC75942.1| hypothetical protein OsI_13038 [Oryza sativa Indica Group]
Length = 261
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREY----------L 52
R F FV FSDP D A ++ +++DG I V A P+ Y
Sbjct: 48 RGFGFVTFSDPEAVDSAIKEMHCQELDGRTISVNKAE--PKMNTDDTRYESGGGRGEYRG 105
Query: 53 GRGPPPGSGRCFNCGIDGHWARDC 76
GRG P G CF CG GHWARDC
Sbjct: 106 GRGDGPPPGNCFECGRAGHWARDC 129
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|340711199|ref|XP_003394166.1| PREDICTED: RNA-binding protein 1-like [Bombus terrestris]
Length = 161
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRDA+DA L+G G+R+ VE
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 81
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R F F++F DP DA +A++ ++G + G + V FA
Sbjct: 78 RGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFA 113
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 219
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|226088567|dbj|BAH37028.1| RNA binding motif protein [Tokudaia osimensis]
Length = 279
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 39 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 74
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYAEEAQKAVDRLDGRVVDGREIMVQFAKYGP 96
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 241
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPR 43
R FAFV F D DA DA +++G +DG + V+ AR G R
Sbjct: 55 RSFAFVRFHDRSDAQDAEAAMDGAVLDGRELRVQMARYGRR 95
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 221
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF D RDA+DA L+GR + G R VE + G GG GR
Sbjct: 46 FAFVEFEDARDAEDAVRGLDGRTISGRRARVELSTGRGGRGGGGGRGGPPRGGGKGGR-- 103
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
+ D ++CY CG RGH R+C
Sbjct: 104 -------FQSD-------DRCYECGGRGHFARDC 123
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAF+ F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFITFESPADAKDAARDMNGKLLDGKSIKVEQA 84
>gi|350405857|ref|XP_003487573.1| PREDICTED: RNA-binding protein 1-like [Bombus impatiens]
Length = 162
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRDA+DA L+G G+R+ VE
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 81
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRDA+DA L+G G+R+ VE
Sbjct: 53 FAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 85
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR+VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGP 96
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFLDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|413924259|gb|AFW64191.1| hypothetical protein ZEAMMB73_035767, partial [Zea mays]
Length = 191
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 32/94 (34%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA+DA L+G++ G ++ + SR GRG
Sbjct: 68 FAFIDFDDRRDAEDAIRDLDGKN--GWKVEL------------SRSTNGRG--------- 104
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
+RD + G ++KCY CGE GH R C
Sbjct: 105 --------SRD-RHGGSESKCYECGETGHFAREC 129
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu
rubripes]
Length = 229
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFLDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFVEF D RDA+DA L+GR + G R VE + G GG G G
Sbjct: 46 FAFVEFEDARDAEDAVRGLDGRTISGRRARVELSTGRGGRGGGGGGRGGPPRGGGKPG-- 103
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
++CY CG RGH R+C
Sbjct: 104 ------------GRFQSDDRCYECGGRGHFARDC 125
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 89/199 (44%), Gaps = 20/199 (10%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 62
R F F+++ DP DA +A++ ++G + G + V FA + P R RG G
Sbjct: 78 RGFGFIQYVDPADAAEAKHHMDGSHLLGRELTVVFAEENRKKPTEMRT-RDRG---GRSN 133
Query: 63 CFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSR 122
FN + + R RG+ +SP R +S S SP RR +
Sbjct: 134 RFNDRRRSPPRYSRSPPPRRGRRSRSRSRGY------DSPSAKRHQSRSVSPQDRR-YEK 186
Query: 123 SRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDE 182
RSYSR + SR R S R + +RSPR S SP+R R+ P + R +SP
Sbjct: 187 ERSYSRSPPHNGSRI---RSGSPGRVKSHSRSPRRSVSPRRNRSYTP-EQARSQSPV--- 239
Query: 183 RSPQDQRSPSPRDRRQANG 201
P+ RSP+P R NG
Sbjct: 240 --PRQSRSPTPVPRGAQNG 256
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 44
R FAFV F D RDA+DA +++G +DG + V+ AR G G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARCGGYG 96
>gi|157823451|ref|NP_001100890.1| RNA-binding motif protein, X chromosome retrogene-like [Rattus
norvegicus]
gi|71152131|sp|P84586.1|RMXRL_RAT RecName: Full=RNA-binding motif protein, X chromosome
retrogene-like; AltName: Full=Heterogeneous nuclear
ribonucleoprotein G retrogene-like; Short=hnRNP G;
AltName: Full=RNA-binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA-binding motif
protein, X chromosome retrogene-like, N-terminally
processed
gi|149037963|gb|EDL92323.1| RNA binding motif protein, X chromosome retrogene (predicted)
[Rattus norvegicus]
Length = 388
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA D +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQA 84
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R F+FV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFSFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|119609847|gb|EAW89441.1| splicing factor, arginine/serine-rich 2, isoform CRA_b [Homo
sapiens]
Length = 208
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 42 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 80
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA S++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFYDKRDAEDALDSMDGAIMDGRELRVQMARYG 93
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAF+ F P DA DA +NG+ +DG I VE A
Sbjct: 68 RGFAFITFESPADAKDAARDMNGKLLDGKSIKVEQA 103
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R F+FV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFSFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D DA DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDRSDAQDAEAAMDGAVLDGRELRVQMARYG 93
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR+VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGP 96
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|328777412|ref|XP_397274.4| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 193
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRDA+DA L+G G+R+ VE
Sbjct: 80 FAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 112
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA D +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQA 84
>gi|380012958|ref|XP_003690539.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 193
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAFVEF DPRDA+DA L+G G+R+ VE
Sbjct: 80 FAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVEM 112
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|291230087|ref|XP_002734999.1| PREDICTED: RNA-binding protein, putative-like [Saccoglossus
kowalevskii]
Length = 315
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFV + DA++A ++GR V G R+ V AR RG G + RC+
Sbjct: 101 FAFVVYKRREDAEEAMREMDGRMVCGGRVRVNIARPRTRGRGRRG-------FDPNLRCY 153
Query: 65 NCGIDGHWARDCK 77
CG GH++RDC+
Sbjct: 154 QCGERGHFSRDCR 166
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R F+FV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFSFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|374253685|sp|D4AE41.1|RMXL1_RAT RecName: Full=RNA binding motif protein, X-linked-like-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
G-like 1; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
Length = 388
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA D +NG+ +DG I VE A
Sbjct: 49 RGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQA 84
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 58 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 96
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYEDEAQKAVDRLDGRVVDGREIMVQFAKYGP 96
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR+VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGP 96
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 206
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Monodelphis domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Papio anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2
[Papio anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3
[Papio anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4
[Papio anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component,
35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|452820198|gb|EME27244.1| splice factor, putative isoform 1 [Galdieria sulphuraria]
Length = 388
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
+KR F FV++ + +A DA SL G+ V G +I VE++R
Sbjct: 31 LKRGFMFVDYDEEAEAKDALESLQGKQVGGLKINVEWSR 69
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAF+ F P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFITFESPADAKDAARDMNGKLLDGKSIKVEQA 84
>gi|403357639|gb|EJY78448.1| U1 small nuclear ribonucleoprotein 70 kDa [Oxytricha trifallax]
Length = 426
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
+AF+E+ + RD A NGR VDG+R++V++ RG
Sbjct: 163 YAFIEYDNERDFQLALERGNGRRVDGARVVVDYERG 198
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFFDKRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|340507329|gb|EGR33308.1| RNA binding protein, putative [Ichthyophthirius multifiliis]
Length = 297
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 42/117 (35%), Gaps = 35/117 (29%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR--------------- 49
+A V + P +A+ A LN D+ G ++VE R R
Sbjct: 45 YATVTYKYPENAEKAIAKLNNTDILGGNLLVEHTLKKSRNENSYRYEDKYRDGRNDYRSS 104
Query: 50 ------EYLG---RGPP--------PGSGRCFNCGIDGHWARDC---KAGDWKNKCY 86
+Y R PP G CFNC GH ARDC K G ++ K Y
Sbjct: 105 RYDRDRDYQSSSRREPPFRFDKEKFIKGGLCFNCSEKGHVARDCPDAKQGIYRGKTY 161
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 43 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYG 81
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYEDEAQKAVDRLDGRVVDGREIMVQFAKYGP 96
>gi|307109660|gb|EFN57897.1| hypothetical protein CHLNCDRAFT_141933 [Chlorella variabilis]
Length = 505
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
F FV F D RDA DA GRD+DG+ I V A G
Sbjct: 75 FGFVSFEDDRDARDALNDAGGRDLDGAAIKVNIAHG 110
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
R +AFVEF RD A S +G+ +DG R++V+ RG
Sbjct: 145 RGYAFVEFDRERDMHTAYKSADGKKIDGRRVLVDVERG 182
>gi|413924264|gb|AFW64196.1| hypothetical protein ZEAMMB73_035767 [Zea mays]
Length = 136
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 32/94 (34%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA+DA L+G++ G ++ + SR GRG
Sbjct: 13 FAFIDFDDRRDAEDAIRDLDGKN--GWKVEL------------SRSTNGRG--------- 49
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
+RD G ++KCY CGE GH R C
Sbjct: 50 --------SRDRHGGS-ESKCYECGETGHFAREC 74
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 55 RGFAFVRFHDNRDAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR+VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGP 96
>gi|414872129|tpg|DAA50686.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 259
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 12/85 (14%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
R F FV F D R D A ++G+++DG I V A P+ Y G G
Sbjct: 9 HRGFGFVTFEDRRAVDSAIKEMHGQEIDGRTISVNKAE--PKMNTDDTRYAGGGGRGEYR 66
Query: 62 R----------CFNCGIDGHWARDC 76
CF CG GHW RDC
Sbjct: 67 GGRGDGPPPGNCFECGRPGHWVRDC 91
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I+V+FA+ GP
Sbjct: 58 RGFAFVRYKYEDEAQKAVERLDGRLVDGREIMVQFAKYGP 97
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR+VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGP 96
>gi|403370431|gb|EJY85077.1| Zinc knuckle family protein [Oxytricha trifallax]
Length = 1917
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 14/52 (26%)
Query: 63 CFNCGIDGHWARDCKAGDWKNK--------------CYRCGERGHIERNCQN 100
CF CG GH AR+C D + + C++C E GH+ R+C N
Sbjct: 1725 CFKCGQSGHMARECPNPDTRPQGGRGRGGPGGGSRACFKCNEEGHMARDCPN 1776
>gi|390337101|ref|XP_800412.2| PREDICTED: serine/arginine-rich splicing factor 12-like
[Strongylocentrotus purpuratus]
Length = 205
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
R FA+V+F D RDA+DA Y+L+ G + +++A G + P R
Sbjct: 54 RGFAYVQFDDIRDAEDAMYALDRYRFYGRELEIQYAEGDRKTPTQMR 100
>gi|195635411|gb|ACG37174.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|413922982|gb|AFW62914.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 277
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA DA L+G+ +G R+ + GG RG + + +C+
Sbjct: 40 FAFIDFDDRRDAQDAIRDLDGK--NGWRVELSTKDGGGRGRDRNGSDM---------KCY 88
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 89 ECGEVGHFARECRL 102
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR+VDG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGP 96
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 110/268 (41%), Gaps = 30/268 (11%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGP--------GGSREYLGRGP 56
FAF++F D RDA +A + +G + DG R+ VEF RG GSR GP
Sbjct: 45 FAFIQFDDRRDAKEAVRACDGYEFDGKRLRVEFPRGKGPRGPGGRPTRDNGSRFGRNGGP 104
Query: 57 PPGSG-RCFNCGI--DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRS 113
P S R G+ G W D K+ + GE + N N + Y
Sbjct: 105 PKRSNYRLIVEGLPRSGSWQ------DIKDHLKQAGEICYA--NVHNGEGVVEFERYENL 156
Query: 114 PSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKG 173
R ++ S + R + + +RRTRS S+SP R R S SS+
Sbjct: 157 EYAIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPNRGRCSRSSSRS 216
Query: 174 RKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSPR---GKSRSPV-------DDADGPE 223
+ S RS SP R+ + SE SGSP +SRSP+ ++ P
Sbjct: 217 KSSIRGRRTGSASKSRSRSPVSRQHRDRSE-SGSPARRVSRSRSPISRQRRARSESGTPA 275
Query: 224 DRNYRSPPEENGRSRSRSLSPVPRDDRS 251
R RS +SR RS+S V R RS
Sbjct: 276 RRATRSRSPVKRQSRDRSVSSVGRASRS 303
>gi|2625130|gb|AAB86639.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
Length = 388
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV P DA DA +NG+ +DG I VE A
Sbjct: 49 RGFAFVTLESPADAKDAARDMNGKSLDGKAIKVEQA 84
>gi|384496178|gb|EIE86669.1| hypothetical protein RO3G_11380 [Rhizopus delemar RA 99-880]
Length = 148
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 14/54 (25%)
Query: 23 LNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 76
++G +DG RI VE A+G + CF CG GHWAR C
Sbjct: 4 IDGMKIDGVRIAVEIAKGARK--------------ESDSNCFKCGERGHWARYC 43
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I V+FA+ GP
Sbjct: 57 RGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGP 96
>gi|357137369|ref|XP_003570273.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Brachypodium distachyon]
Length = 189
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA+DA L+G+ +G R+ + G G +C+
Sbjct: 40 FAFIDFDDKRDAEDALRDLDGK--NGWRVELSRNSSGRGGGRDGGGGGRDRHGGSESKCY 97
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 98 ECGESGHFARECRL 111
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV + +A A L+GR+VDG I+V+FA+ G
Sbjct: 57 RGFAFVRYKYADEAQKAIERLDGREVDGRHIVVQFAKYG 95
>gi|293335932|ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea mays]
gi|223946377|gb|ACN27272.1| unknown [Zea mays]
gi|414872130|tpg|DAA50687.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 297
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 12/85 (14%)
Query: 2 KRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 61
R F FV F D R D A ++G+++DG I V A P+ Y G G
Sbjct: 47 HRGFGFVTFEDRRAVDSAIKEMHGQEIDGRTISVNKAE--PKMNTDDTRYAGGGGRGEYR 104
Query: 62 R----------CFNCGIDGHWARDC 76
CF CG GHW RDC
Sbjct: 105 GGRGDGPPPGNCFECGRPGHWVRDC 129
>gi|226502815|ref|NP_001147002.1| LOC100280612 [Zea mays]
gi|195606380|gb|ACG25020.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|195616164|gb|ACG29912.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|413924261|gb|AFW64193.1| splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413924262|gb|AFW64194.1| splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
Length = 163
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 32/94 (34%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA+DA L+G++ G ++ + SR GRG
Sbjct: 40 FAFIDFDDRRDAEDAIRDLDGKN--GWKVEL------------SRSTNGRG--------- 76
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 98
+RD G ++KCY CGE GH R C
Sbjct: 77 --------SRDRHGGS-ESKCYECGETGHFAREC 101
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
gi|241937164|gb|EES10309.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
Length = 270
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 12/57 (21%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA------------RGGPRGPGG 47
R F FVEF D DA +A+Y +N + G I V A R GPRG G
Sbjct: 81 RGFGFVEFVDAYDASEAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSG 137
>gi|344270020|ref|XP_003406844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Loxodonta africana]
Length = 477
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F DA DA +NG+ +DG I VE A
Sbjct: 135 RGFAFVTFESSADAKDAARDMNGKSLDGKAIKVEQA 170
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
R FAFVEF DP DA AR L+G ++DG I V +A+
Sbjct: 74 RGFAFVEFYDPGDAAHARDRLDGYNLDGRNISVLYAQ 110
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGP 96
>gi|448878332|gb|AGE46129.1| arginine/serine-rich splicing factor SCL31 [Sorghum bicolor]
Length = 270
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 12/57 (21%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA------------RGGPRGPGG 47
R F FVEF D DA +A+Y +N + G I V A R GPRG G
Sbjct: 81 RGFGFVEFVDAYDASEAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSG 137
>gi|67466087|ref|XP_649199.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56465579|gb|EAL43816.1| hypothetical protein EHI_192780 [Entamoeba histolytica HM-1:IMSS]
Length = 220
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 14/77 (18%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 60
+K F FV F++ D + G + VE ARG SRE +
Sbjct: 35 IKSHFGFVTFTNAEDGKKIIDDKIDITIKGRHVSVEQARGDR-----SRE---------N 80
Query: 61 GRCFNCGIDGHWARDCK 77
C+ CG GHWARDCK
Sbjct: 81 DVCYLCGKTGHWARDCK 97
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D RDA+DA +++G +DG + V+ AR G
Sbjct: 41 RGFAFVRFFDKRDAEDAMDAMDGALLDGRELRVQMARYG 79
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
FAF+EF DPRDA DA +G ++DG RI VE
Sbjct: 46 FAFIEFDDPRDARDAIRGRDGYELDGCRIRVEMT 79
>gi|212722094|ref|NP_001132794.1| uncharacterized protein LOC100194283 [Zea mays]
gi|194695412|gb|ACF81790.1| unknown [Zea mays]
gi|224035575|gb|ACN36863.1| unknown [Zea mays]
gi|413939271|gb|AFW73822.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|413939272|gb|AFW73823.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|413939273|gb|AFW73824.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|448878150|gb|AGE46038.1| arginine/serine-rich splicing factor RSZ20 transcript I [Zea mays]
gi|448878152|gb|AGE46039.1| arginine/serine-rich splicing factor RSZ20 transcript II [Zea mays]
gi|448878154|gb|AGE46040.1| arginine/serine-rich splicing factor RSZ20 transcript III [Zea
mays]
gi|448878156|gb|AGE46041.1| arginine/serine-rich splicing factor RSZ20 transcript IV [Zea mays]
Length = 173
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA+DA L+G+ +G R VE +R S +C+
Sbjct: 40 FAFIDFDDRRDAEDAIRDLDGK--NGWR--VELSR------NSSGRGGRDRYGGSESKCY 89
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 90 ECGETGHFARECRL 103
>gi|242066788|ref|XP_002454683.1| hypothetical protein SORBIDRAFT_04g035540 [Sorghum bicolor]
gi|241934514|gb|EES07659.1| hypothetical protein SORBIDRAFT_04g035540 [Sorghum bicolor]
gi|448878294|gb|AGE46110.1| arginine/serine-rich splicing factor RSZ19 transcript II [Sorghum
bicolor]
Length = 163
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA+DA L+G+ +G R VE +R S +C+
Sbjct: 40 FAFIDFDDRRDAEDAIRDLDGK--NGWR--VELSR------NSSGRGGRDRYGGSESKCY 89
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 90 ECGETGHFARECRL 103
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
FAF+EF DPRDA DA +G ++DG RI VE
Sbjct: 86 FAFIEFDDPRDARDAIRGRDGYELDGCRIRVEMT 119
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGP 96
>gi|426356205|ref|XP_004045477.1| PREDICTED: uncharacterized protein LOC101137976 [Gorilla gorilla
gorilla]
Length = 496
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGG 41
R FAFV F D DA DA +++G +DG + V AR G
Sbjct: 249 RGFAFVRFHDRSDAQDAEAAMDGAVLDGRELRVRMARYG 287
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
R +AF+E+ RD A +GR +DG R++V+ RG
Sbjct: 182 RGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERG 219
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
R +AFVE+ + RD A +G+ +DG R++V+ RG
Sbjct: 143 RGYAFVEYENERDMHSAYKYADGKKIDGKRVVVDVERG 180
>gi|302760851|ref|XP_002963848.1| hypothetical protein SELMODRAFT_68846 [Selaginella moellendorffii]
gi|300169116|gb|EFJ35719.1| hypothetical protein SELMODRAFT_68846 [Selaginella moellendorffii]
Length = 181
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRI-IVEFARGGPRGPGGSREYLGRGPPPGSGRC 63
FAF+EF D RDA DA ++NG+ +G R+ + + GG G GRG +C
Sbjct: 40 FAFIEFDDYRDAQDAIQNMNGK--NGWRVELSRSSNGGRGGGRDPGAREGRGGGGDELKC 97
Query: 64 FNCGIDGHWARDC 76
+ CG GH+AR+C
Sbjct: 98 YECGEAGHFAREC 110
>gi|443726784|gb|ELU13843.1| hypothetical protein CAPTEDRAFT_222121 [Capitella teleta]
Length = 232
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 10 FSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR 49
F DPRDA+DA Y L+ G + +EFARG + P R
Sbjct: 71 FEDPRDAEDALYHLDRTRFFGCDLEIEFARGDRKTPSQMR 110
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 26/98 (26%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP-RGPGGSRE----------- 50
R F FV F + R +DA ++NG D+DG I V+ A+ P +G G +
Sbjct: 47 RGFGFVTFDEKRAMEDAIEAMNGVDLDGRDITVDKAQ--PDKGSGRDFDSDRPRDRDRDR 104
Query: 51 ------------YLGRGPPPGSGRCFNCGIDGHWARDC 76
Y G G G CFNCG GH+AR+C
Sbjct: 105 GRDRDRDRGSRDYGGGRGSGGGGDCFNCGKPGHFAREC 142
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 40
R +AF+E+ RD A +GR +DG R++V+ RG
Sbjct: 182 RGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERG 219
>gi|448878292|gb|AGE46109.1| arginine/serine-rich splicing factor RSZ19 transcript I [Sorghum
bicolor]
Length = 163
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF++F D RDA+DA L+G+ +G R VE +R S +C+
Sbjct: 40 FAFIDFDDRRDAEDAIRDLDGK--NGWR--VELSR------NSSGRGGRDRYGGSESKCY 89
Query: 65 NCGIDGHWARDCKA 78
CG GH+AR+C+
Sbjct: 90 ECGETGHFARECRL 103
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGP 96
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I+V+FA+ GP
Sbjct: 58 RGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGP 97
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAF + +A A L+G++VDG I+V+FA+ GP
Sbjct: 57 RGFAFFRYKYADEAQKAVERLDGKNVDGRYIMVQFAKYGP 96
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGP 96
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 1 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAR 39
MK ++ F+++ R+A+DA Y ++ R G RI VE AR
Sbjct: 57 MKGNYCFLQYEKTREAEDAVYEMHDRSFFGERIQVEHAR 95
>gi|68035449|gb|AAY84872.1| pre-mRNA processing factor [Triticum aestivum]
Length = 167
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAFV+F D RDA DA L+G+ +G R VE +R G GG +C+
Sbjct: 40 FAFVDFDDRRDAQDAIKDLDGK--NGWR--VELSRNASSGRGGRDR-----SGGSEMKCY 90
Query: 65 NCGIDGHWARDCK 77
CG GH+AR+C+
Sbjct: 91 ECGESGHFARECR 103
>gi|225448932|ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
vinifera]
Length = 278
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 31/95 (32%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGP------ 56
R F F+ ++D R +DA ++GRD G RII + P+ +G P
Sbjct: 48 RGFGFITYADRRGMEDAIREMHGRDF-GDRII-SVNKAQPK--------MGEDPDHGYNG 97
Query: 57 ---------------PPGSGRCFNCGIDGHWARDC 76
G CF CG GHWARDC
Sbjct: 98 GYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDC 132
>gi|116787469|gb|ABK24519.1| unknown [Picea sitchensis]
Length = 169
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 56/129 (43%), Gaps = 15/129 (11%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCF 64
FAF+EF D RDA DA +LNG++ VE +R G G R C+
Sbjct: 40 FAFIEFEDRRDAGDAVRALNGKN----DWRVELSRNSGGGGRGGRG-----RGGDDMSCY 90
Query: 65 NCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQN----SPKKLRPRSYS--RSPSPRR 118
CG GH+AR+C + + S + P+SYS R PSP R
Sbjct: 91 KCGESGHFARECNLRGGRGEYGGRARSRSPRYRRSPSYGRSGRSPVPKSYSPRRYPSPYR 150
Query: 119 GRSRSRSYS 127
GRS R Y+
Sbjct: 151 GRSPHRDYA 159
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 37
FAF++F D RDA +A + +G + DG R+ VEF
Sbjct: 45 FAFIQFDDRRDAKEAVRARDGYEFDGKRLRVEF 77
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR +DG I+V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGP 96
>gi|72160170|ref|XP_788983.1| PREDICTED: uncharacterized protein LOC584006 [Strongylocentrotus
purpuratus]
Length = 300
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 5 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVE 36
FAFVEF A+ A LNGR G+RI+VE
Sbjct: 46 FAFVEFETAGQAEAALKELNGRTFLGNRIMVE 77
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I+V+FA+ GP
Sbjct: 58 RGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGP 97
>gi|147841866|emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]
Length = 240
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 31/95 (32%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGP------ 56
R F F+ ++D R +DA ++GRD G RII + P+ +G P
Sbjct: 10 RGFGFITYADRRGMEDAIREMHGRDF-GDRII-SVNKAQPK--------MGEDPDHGYNG 59
Query: 57 ---------------PPGSGRCFNCGIDGHWARDC 76
G CF CG GHWARDC
Sbjct: 60 GYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDC 94
>gi|403263414|ref|XP_003924028.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 335
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 38
R FAFV F P DA DA +NG+ +D I VE A
Sbjct: 10 RGFAFVTFESPADAKDAARDMNGKSLDRKAIKVEQA 45
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 3 RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 42
R FAFV + +A A L+GR VDG I V+FA+ GP
Sbjct: 57 RGFAFVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGP 96
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.133 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,213,545,917
Number of Sequences: 23463169
Number of extensions: 277895043
Number of successful extensions: 1770379
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8615
Number of HSP's successfully gapped in prelim test: 45608
Number of HSP's that attempted gapping in prelim test: 1260783
Number of HSP's gapped (non-prelim): 271730
length of query: 268
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 128
effective length of database: 9,074,351,707
effective search space: 1161517018496
effective search space used: 1161517018496
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 75 (33.5 bits)