BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024428
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/261 (80%), Positives = 233/261 (89%), Gaps = 8/261 (3%)
Query: 12 SVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSG----GSSCIGQD 67
+VKAKIMAHPHYHRLLAAY NCQKVGAPPEVVARLEE CASAA+M G GSSCIG+D
Sbjct: 123 AVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGED 182
Query: 68 PALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSEAIDRNGS 127
PALDQFMEAYCEMLTKYEQELSKP KEAM FLQ+IE QFK+L+ISS + AS+E DRNGS
Sbjct: 183 PALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFASNEGGDRNGS 242
Query: 128 SEEDFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDW 187
SEED D++ + IDPQAED++LKGQLLR+YSG L SLKQEFMKKRKKGKLPKEARQQLL+W
Sbjct: 243 SEEDVDLH-NMIDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEW 301
Query: 188 WSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQPQY 247
W++HYKWPYPS ESQKLALAESTGLD KQINNWFINQRKRHWKPSEDMQF+VMD + P Y
Sbjct: 302 WNRHYKWPYPS-ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPSHPHY 360
Query: 248 YIDSTVMGNPFPMDLSPAPLL 268
Y+D+ V+GNPFPMDLS P+L
Sbjct: 361 YMDN-VLGNPFPMDLS-HPML 379
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
GN=LET6 PE=2 SV=1
Length = 355
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/257 (76%), Positives = 220/257 (85%), Gaps = 9/257 (3%)
Query: 18 MAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIG----QDPALDQF 73
MAHPHYHRLL AY NCQK+GAPPEVVARLEE+CA++A+MG SS G +DPALDQF
Sbjct: 101 MAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQF 160
Query: 74 MEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSI---SSPNSASSEAIDRNGSSEE 130
MEAYCEMLTKYEQELSKPFKEAM FL +IE QFK+L++ SS SA EA+DRNGSS+E
Sbjct: 161 MEAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLAPNSSHESALGEAMDRNGSSDE 220
Query: 131 DFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSK 190
+ DVN FIDPQAED+ELKGQLLR+YSG L SLKQEFMKKRKKGKLPKEARQQL+DWW +
Sbjct: 221 EVDVNNSFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLR 280
Query: 191 HYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQPQYYID 250
H KWPYPS ESQKLALAESTGLD KQINNWFINQRKRHWKPSEDMQF+VMDA P YY+D
Sbjct: 281 HIKWPYPS-ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMD 339
Query: 251 STVMGNPFPMDLSPAPL 267
+ V+ N FPMD++P+ L
Sbjct: 340 N-VLANHFPMDMTPSLL 355
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
PE=1 SV=2
Length = 382
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/263 (77%), Positives = 226/263 (85%), Gaps = 8/263 (3%)
Query: 13 VKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGS--GGSSCIGQDPAL 70
VKAKIMAHPHYHRLLAAY NCQKVGAPPEVVARLEE C+SAA+ + G + C+G+DP L
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGL 180
Query: 71 DQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASS---EAIDRN-- 125
DQFMEAYCEML KYEQELSKPFKEAM FLQ++E QFKSLS+SSP+S S AIDRN
Sbjct: 181 DQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNN 240
Query: 126 GSSEEDFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLL 185
GSSEE+ D+N +F+DPQAED+ELKGQLLR+YSG L SLKQEFMKKRKKGKLPKEARQQLL
Sbjct: 241 GSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL 300
Query: 186 DWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQP 245
DWWS+HYKWPYPS E QKLALAESTGLD KQINNWFINQRKRHWKPSEDMQF+VMDAT P
Sbjct: 301 DWWSRHYKWPYPS-EQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHP 359
Query: 246 QYYIDSTVMGNPFPMDLSPAPLL 268
+Y V+GNPFPMD + +L
Sbjct: 360 HHYFMDNVLGNPFPMDHISSTML 382
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 361 bits (927), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 200/257 (77%), Positives = 219/257 (85%), Gaps = 11/257 (4%)
Query: 13 VKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAAS----MGSGGSSCIGQDP 68
VKAKIMAHPHYHRLL AY NCQKVGAPPEV ARLEE C+SAA+ MG GS +G+DP
Sbjct: 123 VKAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAASMGPTGS--LGEDP 180
Query: 69 ALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSAS--SEAIDRN- 125
LDQFMEAYCEML KYEQELSKPFKEAM FLQ +E QFKSLS+SSP+S AI+RN
Sbjct: 181 GLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAAIERNN 240
Query: 126 -GSSEEDFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQL 184
GSSEE+ D+N +F+DPQAED+ELKGQLLR+YSG L SLKQEFMKKRKKGKLPKEARQQL
Sbjct: 241 NGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQL 300
Query: 185 LDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQ 244
LDWWS+HYKWPYPS E QKLALAESTGLD KQINNWFINQRKRHWKPSEDMQF+VMDAT
Sbjct: 301 LDWWSRHYKWPYPS-EQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATH 359
Query: 245 PQYYIDSTVMGNPFPMD 261
P +Y V+GNPFP+D
Sbjct: 360 PLHYFMGNVLGNPFPID 376
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
Length = 397
Score = 267 bits (683), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/269 (56%), Positives = 184/269 (68%), Gaps = 23/269 (8%)
Query: 7 SGASSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCAS--AASMGSGGSSCI 64
S ++KAKI+AHP Y LL AY +CQ+VGAP +VVARL A SG S
Sbjct: 126 SNEVEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVARQEFEARQRSSGTSRET 185
Query: 65 GQDPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLS---------ISSPN 115
+DP LDQFMEAY +ML KY +EL++P +EAM F+++IE+Q L I SP+
Sbjct: 186 SKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNNNAPPLRIFSPS 245
Query: 116 SASSEAIDRNGSSEED-----FDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKK 170
E I GSSEE+ + + IDP+AED+ELK LLR+YSG LSSLKQE KK
Sbjct: 246 EDKCEGI---GSSEEEQENSGGETEVPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKK 302
Query: 171 RKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWK 230
+KKGKLPK+ARQ+LL WW HYKWPYPS ES+K+ALAESTGLD KQINNWFINQRKRHWK
Sbjct: 303 KKKGKLPKDARQKLLSWWELHYKWPYPS-ESEKVALAESTGLDQKQINNWFINQRKRHWK 361
Query: 231 PSEDMQFMVMDATQPQ---YYIDSTVMGN 256
PSEDMQFMVMD PQ Y+D +G+
Sbjct: 362 PSEDMQFMVMDGLHPQNAALYMDGHYIGD 390
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
Length = 364
Score = 267 bits (682), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/258 (58%), Positives = 183/258 (70%), Gaps = 20/258 (7%)
Query: 12 SVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASA-----ASMGSGGSSCIGQ 66
++KAKI++HPHY LLAAY +CQKVGAPPEV ARL V ++G G++
Sbjct: 107 AIKAKIISHPHYSSLLAAYLDCQKVGAPPEVSARLTAVAQDLELRQRTALGGLGTAT--- 163
Query: 67 DPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSEAIDRNG 126
+P LDQFMEAY EML KY +EL++P +EAM FL+++E+Q SLSIS S I G
Sbjct: 164 EPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNSLSISG---RSLRNILSTG 220
Query: 127 SSEED-----FDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEAR 181
SSEED + + ID DQELK LL++YSG LSSLKQE KK+KKGKLPKEAR
Sbjct: 221 SSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEAR 280
Query: 182 QQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMD 241
QQLL WW HYKWPYPS ESQK+ALAESTGLD KQINNWFINQRKRHWKP+++MQF++MD
Sbjct: 281 QQLLSWWEMHYKWPYPS-ESQKVALAESTGLDLKQINNWFINQRKRHWKPTDEMQFVMMD 339
Query: 242 ATQP---QYYIDSTVMGN 256
A P +Y+D + +
Sbjct: 340 AYHPPNAAFYMDGHFVND 357
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
GN=OSH1 PE=2 SV=2
Length = 361
Score = 266 bits (680), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/259 (57%), Positives = 184/259 (71%), Gaps = 21/259 (8%)
Query: 12 SVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASA-----ASMGSGGSSCIGQ 66
++KAKI++HPHY LLAAY +CQKVGAPPEV ARL V ++G G++
Sbjct: 103 AIKAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTALGVLGAAT--- 159
Query: 67 DPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSEAIDRNG 126
+P LDQFMEAY EML KY +EL++P +EAM FL+++E+Q +LSIS S I +G
Sbjct: 160 EPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLSISG---RSLRNILSSG 216
Query: 127 SSEED-----FDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEAR 181
SSEED + + ID DQELK LL++YSG LSSLKQE KK+KKGKLPK+AR
Sbjct: 217 SSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDAR 276
Query: 182 QQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMD 241
QQLL+WW HYKWPYPS ESQK+ALAESTGLD KQINNWFINQRKRHWKPS++MQF++MD
Sbjct: 277 QQLLNWWELHYKWPYPS-ESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 335
Query: 242 ATQPQ----YYIDSTVMGN 256
P +Y+D + +
Sbjct: 336 GYHPTNAAAFYMDGHFIND 354
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
PE=1 SV=1
Length = 398
Score = 266 bits (679), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 191/272 (70%), Gaps = 25/272 (9%)
Query: 12 SVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARL---EEVCASAASMGSGGSSCIGQDP 68
++KAKI+AHPHY LL AY +CQK+GAPP+VV R+ + + + S +DP
Sbjct: 133 AMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDP 192
Query: 69 ALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLS------ISSPNSASSEAI 122
LDQFMEAYC+ML KY +EL++P +EAM F+++IESQ L +++P+ S
Sbjct: 193 ELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKS---- 248
Query: 123 DRNGSSEEDFDVN------IDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKL 176
D GSS+E+ + N + IDP+AED+ELK LL++YSG LSSLKQE KK+KKGKL
Sbjct: 249 DNMGSSDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKL 308
Query: 177 PKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQ 236
PKEARQ+LL WW HYKWPYPS ES+K+ALAESTGLD KQINNWFINQRKRHWKPSEDMQ
Sbjct: 309 PKEARQKLLTWWELHYKWPYPS-ESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 367
Query: 237 FMVMDATQ-PQY---YIDSTVMGNPFPMDLSP 264
FMVMD Q P + Y+D MG+ P L P
Sbjct: 368 FMVMDGLQHPHHAALYMDGHYMGD-GPYRLGP 398
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
Length = 355
Score = 265 bits (677), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/271 (57%), Positives = 187/271 (69%), Gaps = 17/271 (6%)
Query: 6 GSGASS---SVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCAS--AASMGSGG 60
G+GA ++KAKI+AHP LL AY +CQKVGAPPEV ARL V A S
Sbjct: 84 GAGAGEVIEALKAKIIAHPQCSNLLDAYMDCQKVGAPPEVAARLSAVRQEFEARQRRSLT 143
Query: 61 SSCIGQDPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSE 120
+ +DP LDQFMEAY +ML KY +EL++P +EAM F+QKIE+Q L + +SE
Sbjct: 144 DRDVSKDPELDQFMEAYYDMLVKYREELTRPLQEAMEFMQKIEAQLNMLGNAPVRIFNSE 203
Query: 121 -AIDRNGSSEEDFD-----VNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKG 174
+ GSSEED D + IDP+AED+ELK LLR+YSG LSSLKQE KK+KKG
Sbjct: 204 DKCEGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKG 263
Query: 175 KLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSED 234
KLPK+ARQ+L+ WW HYKWPYPS ES+K+ALAESTGLD KQINNWFINQRKRHWKPSED
Sbjct: 264 KLPKDARQKLITWWELHYKWPYPS-ESEKVALAESTGLDQKQINNWFINQRKRHWKPSED 322
Query: 235 MQFMVMDATQPQ----YYIDSTVMG-NPFPM 260
MQFMVMD PQ Y++ MG PF +
Sbjct: 323 MQFMVMDGLHPQSAAALYMEGHYMGEGPFRL 353
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
Length = 398
Score = 263 bits (672), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 182/269 (67%), Gaps = 23/269 (8%)
Query: 7 SGASSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCAS--AASMGSGGSSCI 64
S ++KAKI+AHP Y L+ AY +CQ+VGAP +VV RL A SG S
Sbjct: 127 SNEVEAIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLSVARQEFEARQRSSGTSRET 186
Query: 65 GQDPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLS---------ISSPN 115
+DP LDQFMEAY +ML KY +EL++P +EAM F+++IE+Q L I SP+
Sbjct: 187 SKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNNNAPPLRIFSPS 246
Query: 116 SASSEAIDRNGSSEED-----FDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKK 170
E I GSSE++ + + IDP+AED+ELK LLR+YSG LSSLKQE KK
Sbjct: 247 EDKCEGI---GSSEDEQENSGGETEVPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKK 303
Query: 171 RKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWK 230
+KKGKLPKEARQ+LL WW HYKWPYPS ES+K+ALAESTGLD KQINNWFINQRKRHWK
Sbjct: 304 KKKGKLPKEARQKLLSWWELHYKWPYPS-ESEKVALAESTGLDQKQINNWFINQRKRHWK 362
Query: 231 PSEDMQFMVMDATQPQ---YYIDSTVMGN 256
PSEDMQFMVMD PQ Y+D G+
Sbjct: 363 PSEDMQFMVMDGLHPQNAALYMDGHYTGD 391
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 180/259 (69%), Gaps = 13/259 (5%)
Query: 7 SGASSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVC--ASAASMGSGGSSCI 64
+G ++KAKI++HPHY+ LL AY C KVGAPPEV ARL E+ A + G
Sbjct: 98 AGDVEAIKAKIISHPHYYSLLTAYLECNKVGAPPEVSARLTEIAQEVEARQRTALGGLAA 157
Query: 65 GQDPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSEAIDR 124
+P LDQFMEAY EML K+ +EL++P +EAM F++++ESQ SLSIS S I
Sbjct: 158 ATEPELDQFMEAYHEMLVKFREELTRPLQEAMEFMRRVESQLNSLSISG---RSLRNILS 214
Query: 125 NGSSEED-----FDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKE 179
+GSSEED + + +D DQELK LL++YSG LSSLKQE KK+KKGKLPKE
Sbjct: 215 SGSSEEDQEGSGGETELPEVDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKE 274
Query: 180 ARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMV 239
ARQQLL WW +HYKWPYPS E+QK+ALAESTGLD KQINNWFINQRKRHWKPSE+M ++
Sbjct: 275 ARQQLLSWWDQHYKWPYPS-ETQKVALAESTGLDLKQINNWFINQRKRHWKPSEEMHHLM 333
Query: 240 MDA--TQPQYYIDSTVMGN 256
MD T +Y+D + +
Sbjct: 334 MDGYHTTNAFYMDGHFIND 352
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
GN=OSH15 PE=2 SV=1
Length = 355
Score = 261 bits (666), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 184/270 (68%), Gaps = 26/270 (9%)
Query: 7 SGASSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQ 66
+ + S+KAKIMAHP Y LLAAY +CQKVGAPPEV+ RL A + G +
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDA--R 142
Query: 67 DPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPN----------- 115
DP LDQFMEAYC ML KY +EL++P EAM FL+++ESQ +++ +
Sbjct: 143 DPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIAGGAHGGGAGSARLLLA 202
Query: 116 SASSEAIDRNGSSEEDFDVN-----IDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKK 170
SE + GSSE+D D + IDP+AED+ELK QLL++YSG LSSL+QEF KK
Sbjct: 203 DGKSECV---GSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKK 259
Query: 171 RKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWK 230
+KKGKLPKEARQ+LL WW HYKWPYPS E++K+ALAESTGLD KQINNWFINQRKRHWK
Sbjct: 260 KKKGKLPKEARQKLLHWWELHYKWPYPS-ETEKIALAESTGLDQKQINNWFINQRKRHWK 318
Query: 231 PSEDMQFMVMDATQPQ----YYIDSTVMGN 256
PSEDM F++M+ PQ Y+D M +
Sbjct: 319 PSEDMPFVMMEGFHPQNAAALYMDGPFMAD 348
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
GN=OSH15 PE=2 SV=2
Length = 355
Score = 261 bits (666), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 184/270 (68%), Gaps = 26/270 (9%)
Query: 7 SGASSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQ 66
+ + S+KAKIMAHP Y LLAAY +CQKVGAPPEV+ RL A + G +
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDA--R 142
Query: 67 DPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPN----------- 115
DP LDQFMEAYC ML KY +EL++P EAM FL+++ESQ +++ +
Sbjct: 143 DPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIAGGAHGGGAGSARLLLA 202
Query: 116 SASSEAIDRNGSSEEDFDVN-----IDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKK 170
SE + GSSE+D D + IDP+AED+ELK QLL++YSG LSSL+QEF KK
Sbjct: 203 DGKSECV---GSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKK 259
Query: 171 RKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWK 230
+KKGKLPKEARQ+LL WW HYKWPYPS E++K+ALAESTGLD KQINNWFINQRKRHWK
Sbjct: 260 KKKGKLPKEARQKLLHWWELHYKWPYPS-ETEKIALAESTGLDQKQINNWFINQRKRHWK 318
Query: 231 PSEDMQFMVMDATQPQ----YYIDSTVMGN 256
PSEDM F++M+ PQ Y+D M +
Sbjct: 319 PSEDMPFVMMEGFHPQNAAALYMDGPFMAD 348
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
Length = 351
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/254 (56%), Positives = 176/254 (69%), Gaps = 23/254 (9%)
Query: 18 MAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQDPALDQFMEAY 77
+AHP Y LLAAY +CQKVGAPP+V+ RL + A + +G +DP LDQFMEAY
Sbjct: 95 VAHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAKLDASAAGRHEP--RDPELDQFMEAY 152
Query: 78 CEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSIS--------SPNSASSEAIDRNGSSE 129
C ML KY +EL++P EAM FL+++E+Q +S S SE + GSSE
Sbjct: 153 CNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSLADGKSEGV---GSSE 209
Query: 130 EDFDVN-----IDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQL 184
+D D N IDP+AED+ELK QLL++YSG LSSL+QEF KK+KKGKLPKEARQ+L
Sbjct: 210 DDMDPNGRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKL 269
Query: 185 LDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQ 244
L WW HYKWPYPS E++K+ALAESTGLD KQINNWFINQRKRHWKPSEDM F++M+
Sbjct: 270 LHWWELHYKWPYPS-ETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFH 328
Query: 245 PQ----YYIDSTVM 254
PQ Y+D M
Sbjct: 329 PQNAAALYMDGPFM 342
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
PE=1 SV=1
Length = 327
Score = 237 bits (605), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 169/247 (68%), Gaps = 10/247 (4%)
Query: 11 SSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVC--ASAASMGSGGSSCIGQDP 68
+ +KAKI HP Y RLL AY +CQKVGAPPE+ LEE+ + SSC G DP
Sbjct: 83 TVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADP 142
Query: 69 ALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSEAIDRNGSS 128
LD+FME YC++L KY+ +L++PF EA FL KIE Q ++L + SA + D SS
Sbjct: 143 ELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNL-CTGVESARGVSEDGVISS 201
Query: 129 EE-----DFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQ 183
+E D +V D + ED++LK +LLR++ +S+LK EF KK+KKGKLP+EARQ
Sbjct: 202 DEELSGGDHEVAEDG-RQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQA 260
Query: 184 LLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDAT 243
LLDWW+ HYKWPYP+ E K+ALA++TGLD KQINNWFINQRKRHWKPSE+M F +MD +
Sbjct: 261 LLDWWNLHYKWPYPT-EGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDS 319
Query: 244 QPQYYID 250
++ +
Sbjct: 320 SGSFFTE 326
>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
PE=1 SV=3
Length = 310
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/246 (51%), Positives = 169/246 (68%), Gaps = 8/246 (3%)
Query: 11 SSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGS--SCIGQDP 68
S +K+KI +HP Y RLL Y +CQKVGAP E+ LEE+ + SC G DP
Sbjct: 67 SVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGADP 126
Query: 69 ALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSEAIDRNGSS 128
LD+FME YC++L KY+ +L++PF EA +F+ KIE Q ++L + P SA++ + D SS
Sbjct: 127 ELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNL-CTGPASATALSDDGAVSS 185
Query: 129 EE----DFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQL 184
+E D D+ D ++ D++LK QLLR++ +SSLK EF KK+KKGKLP+EARQ L
Sbjct: 186 DEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQAL 245
Query: 185 LDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQ 244
LDWW+ H KWPYP+ E K++LAE TGLD KQINNWFINQRKRHWKPSE+M F +MD +
Sbjct: 246 LDWWNVHNKWPYPT-EGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDSN 304
Query: 245 PQYYID 250
++ +
Sbjct: 305 ETFFTE 310
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
GN=OSH43 PE=2 SV=1
Length = 341
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/233 (51%), Positives = 154/233 (66%), Gaps = 25/233 (10%)
Query: 7 SGASSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQ 66
+GA ++VKA+IM+HP Y LLAAY C+KVGAPP+V+ +L V A+ + G
Sbjct: 77 AGAEAAVKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQLDEADGHPRRRH 136
Query: 67 DPA-------LDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASS 119
+P LDQFM+AYC MLT+Y +EL +P EA F ++E+Q SL+ S+
Sbjct: 137 EPQRDDDPDQLDQFMDAYCSMLTRYREELERPILEAAEFFSRVETQLDSLAESN------ 190
Query: 120 EAIDRNGSSEEDFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKE 179
+ GSSEE+ D + D++LK QLLR+Y G L L+Q F K+ KKGKLPKE
Sbjct: 191 --CEGTGSSEEEQDPS---------DKQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKE 239
Query: 180 ARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPS 232
ARQ+LL WW HYKWPYPS E +K+ LA++TGLD KQINNWFINQRKRHWKP+
Sbjct: 240 ARQKLLHWWELHYKWPYPS-EMEKMTLAQTTGLDQKQINNWFINQRKRHWKPT 291
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
GN=OSH6 PE=2 SV=1
Length = 301
Score = 227 bits (579), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/259 (50%), Positives = 175/259 (67%), Gaps = 17/259 (6%)
Query: 13 VKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSC-IGQDPALD 71
+KA+I HP Y LL+AY C+KVGAPPEV + L+E+ + G GG + IG DP LD
Sbjct: 43 MKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQIGVDPELD 102
Query: 72 QFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSL---SISSPNSASSEAIDRNGSS 128
+FMEAYC +L +Y++ELS+PF EA SFL I++Q +L + S P + ++ + + GSS
Sbjct: 103 EFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGATSPPATTATHSDEMVGSS 162
Query: 129 EED-FDVNIDFIDPQAE------DQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEAR 181
+ED D +D E D ELK LL++YSGCLS L+ EF+KKRKKGKLPK+AR
Sbjct: 163 DEDQCSGETDMLDIGQEQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDAR 222
Query: 182 QQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMD 241
LL+WW+ HY+WPYP++E KL LA TGLD KQINNWFINQRKRHWKPS+ M+F +M+
Sbjct: 223 SALLEWWNTHYRWPYPTEE-DKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMRFALME 281
Query: 242 -----ATQPQYYIDSTVMG 255
++ Y D+ +G
Sbjct: 282 GVAGGSSGTTLYFDTGTIG 300
>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
GN=OSH10 PE=2 SV=1
Length = 337
Score = 214 bits (545), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 151/231 (65%), Gaps = 13/231 (5%)
Query: 10 SSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGS-----GGSSCI 64
+ ++KAKIM+HP Y LL A+ +CQKVGAPPEVV RL + S G SS
Sbjct: 59 TDAIKAKIMSHPLYPALLRAFIDCQKVGAPPEVVGRLSALAGELDSRAEDRYLQGQSS-- 116
Query: 65 GQDPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSI---SSPNSASSEA 121
DP LD+FME Y +ML Y QEL++P +EA F + +E+Q S ++ S SSE
Sbjct: 117 --DPELDEFMETYIDMLVSYRQELTRPIQEADQFFRNMEAQIDSFTLDDNGSEGGNSSED 174
Query: 122 IDRNGSSEEDFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEAR 181
G + + P AED+ELK LL +YSG LSSL +E KK+KKGKLP++AR
Sbjct: 175 EQEAGGGDMASAGLPEITSPCAEDKELKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDAR 234
Query: 182 QQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPS 232
Q+LL WW HY+WPYPS E +K ALAESTGLD+KQINNWFINQRKRHWKP+
Sbjct: 235 QKLLHWWQLHYRWPYPS-ELEKAALAESTGLDAKQINNWFINQRKRHWKPT 284
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
GN=OSH71 PE=2 SV=1
Length = 311
Score = 211 bits (536), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 125/257 (48%), Positives = 160/257 (62%), Gaps = 15/257 (5%)
Query: 13 VKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQ--DPAL 70
+KA+I HP Y LL+AY C+KVGAPPEV LEE+ G G ++ DP L
Sbjct: 55 MKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGATAGGEIGLDPEL 114
Query: 71 DQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSEAIDRNGSSEE 130
D+FME YC +L +Y++EL++PF EA SFL I +Q SL +P + S +E
Sbjct: 115 DEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVGSSEDE 174
Query: 131 DFDVNIDFIDPQAE------DQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQL 184
+ D D E D ELK LL++YSGCLS L+ EF+KKRKKGKLPK+AR L
Sbjct: 175 PCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSAL 234
Query: 185 LDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQ 244
+DWW+ HY+WPYP++E K+ LA TGLD KQINNWFINQRKRHWKPSEDM+F +M+
Sbjct: 235 MDWWNTHYRWPYPTEE-DKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVT 293
Query: 245 ------PQYYIDSTVMG 255
Y D+ +G
Sbjct: 294 GGSSSGTTLYFDTGTIG 310
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
GN=OSH71 PE=2 SV=2
Length = 311
Score = 211 bits (536), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 125/257 (48%), Positives = 160/257 (62%), Gaps = 15/257 (5%)
Query: 13 VKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQ--DPAL 70
+KA+I HP Y LL+AY C+KVGAPPEV LEE+ G G ++ DP L
Sbjct: 55 MKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGATAGGEIGLDPEL 114
Query: 71 DQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSEAIDRNGSSEE 130
D+FME YC +L +Y++EL++PF EA SFL I +Q SL +P + S +E
Sbjct: 115 DEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVGSSEDE 174
Query: 131 DFDVNIDFIDPQAE------DQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQL 184
+ D D E D ELK LL++YSGCLS L+ EF+KKRKKGKLPK+AR L
Sbjct: 175 PCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSAL 234
Query: 185 LDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQ 244
+DWW+ HY+WPYP++E K+ LA TGLD KQINNWFINQRKRHWKPSEDM+F +M+
Sbjct: 235 MDWWNTHYRWPYPTEE-DKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVT 293
Query: 245 ------PQYYIDSTVMG 255
Y D+ +G
Sbjct: 294 GGSSSGTTLYFDTGTIG 310
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/256 (45%), Positives = 149/256 (58%), Gaps = 23/256 (8%)
Query: 6 GSGASSS---VKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSS 62
G+G SS +KAKIM+HP Y LL A+ +C+KVGAPPEVV RL + G
Sbjct: 61 GTGLQSSEAMIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTDVPQYSGDR 120
Query: 63 CI-----GQDPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSA 117
C+ DP LDQFME YC MLT+Y QEL++P +EA F + IE Q SL++ S
Sbjct: 121 CLPAQQPAADPELDQFMETYCYMLTRYGQELARPIQEAEEFFRGIEEQIDSLALDEDVSY 180
Query: 118 SSEAIDRNGSSEEDFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKK--GK 175
E G E+ + + + L+ +YSG L+SL E K+K G
Sbjct: 181 DYEDEVAGGLPEKSAAFGENEVTTTT-----RRHLMNKYSGYLNSLWTEISNKKKNSTGH 235
Query: 176 LPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKP---- 231
LP++AR +LL WW HY+WPYPS E++K ALAESTGLD KQ+ NWFINQRKRHWKP
Sbjct: 236 LPRDARHKLLQWWHLHYRWPYPS-EAEKAALAESTGLDKKQVTNWFINQRKRHWKPKPAA 294
Query: 232 SEDMQFMVMDATQPQY 247
+ D F+ M P+Y
Sbjct: 295 AMDAGFLQM---HPRY 307
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
GN=OSH3 PE=2 SV=1
Length = 365
Score = 201 bits (511), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 170/270 (62%), Gaps = 25/270 (9%)
Query: 13 VKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIG-----QD 67
VKA+I++HP YHRLLAA+ +C KVG P E + + ++ +D
Sbjct: 73 VKARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPED 132
Query: 68 PALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSA---------- 117
P LDQFME YC++L + ++ELS+P +EA FL+ +ES+ S++ P +A
Sbjct: 133 PELDQFMEDYCKLLVECKEELSRPLQEAEEFLRTVESELNSINSGPPLTALISESKAGLD 192
Query: 118 -SSEAIDRNGSSEEDF----DVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRK 172
S + +GS E D ++ IDP+++D+ LK LLR+YSG L L++E KKRK
Sbjct: 193 SSDDDEHEDGSGMEMMEAAEDEDLGIIDPRSDDKALKRHLLRKYSGYLGGLRKELSKKRK 252
Query: 173 KGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPS 232
KGKLPKEARQ+LL WW HY+WP PS E +K+ALAESTGL+ KQINN FINQRKRHWKP+
Sbjct: 253 KGKLPKEARQKLLTWWELHYRWPNPS-EMEKIALAESTGLEQKQINNCFINQRKRHWKPT 311
Query: 233 EDMQFMVMDATQPQYYIDSTVMGNPFPMDL 262
E+M+F VM+A Y+ ST F +D+
Sbjct: 312 EEMEFAVMEA----YHHQSTDAAAAFYVDV 337
>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
GN=Os03g0772100 PE=2 SV=2
Length = 347
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 143/252 (56%), Gaps = 37/252 (14%)
Query: 7 SGASSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQ 66
+GA +++KA+IM+HP Y LLAAY C+KVGAPP+V+ +L V A+ + + +
Sbjct: 75 AGAEAAMKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRR 134
Query: 67 ----------DPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNS 116
D LDQFM A E+ A S + +S
Sbjct: 135 HEPRRDDDVPDHQLDQFMHA---------DEVQGGAGAA---------DPGSRGVLQLDS 176
Query: 117 ASSEAIDRNGSSEEDFDVNI---DFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKK 173
+ + GSSEE+ D + + IDP D++LK QLL +Y G L L+Q F K+ KK
Sbjct: 177 IADSNCEGTGSSEEEQDTSCPEAEEIDP--SDKQLKHQLLMKYGGSLGDLRQAFSKRTKK 234
Query: 174 GKLPKEARQQLLDWWSKHY-KWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPS 232
GKLPKEAR +LL WW HY KWPYPS E +K+ LA++TGLD KQI+NWFINQRKRHWKP+
Sbjct: 235 GKLPKEARLKLLHWWELHYDKWPYPS-EVEKMTLAQTTGLDQKQISNWFINQRKRHWKPT 293
Query: 233 --EDMQFMVMDA 242
M F ++A
Sbjct: 294 PVAGMTFPTVEA 305
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 131/245 (53%), Gaps = 30/245 (12%)
Query: 14 KAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARL---EEVCASAASMGSGGSSCIGQ 66
KA+I++HP Y +LL+A+ C ++ P P + A+L + V A +++G+ +G
Sbjct: 160 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQGLVGD 219
Query: 67 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMSFLQKIESQFKSLSISSPNSASSEAI 122
D LDQFM Y +L ++++L + + EA+ +IE +SL+ SP +
Sbjct: 220 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATM 279
Query: 123 --DRNGSSEED---FDVNID------FIDPQAED-------QELKGQLLRRYSGCLSSLK 164
D + E D FD +D I ++E QELK +L + Y + ++
Sbjct: 280 SDDEDEQVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIR 339
Query: 165 QEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQ 224
+E ++KR+ GKLP + L WW H KWPYP++E K L + TGL KQINNWFINQ
Sbjct: 340 EEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEED-KARLVQETGLQLKQINNWFINQ 398
Query: 225 RKRHW 229
RKR+W
Sbjct: 399 RKRNW 403
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 127/245 (51%), Gaps = 30/245 (12%)
Query: 14 KAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEVCASAASMGSGGSSCIGQDPA 69
KA+I+AHP Y LL+A+ C ++ P P + A+L + A + G+ +G D
Sbjct: 168 KAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGMVGDDKE 227
Query: 70 LDQFMEAYCEMLTKYEQELSKPFK----EAMSFLQKIESQFKSLSISSPNSASSEAIDRN 125
LDQFM Y +L ++++L + + EA+ +IE +SL+ SP +S + +
Sbjct: 228 LDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTSATMSDD 287
Query: 126 GSSEEDFDVNI--------------DFIDPQAED-------QELKGQLLRRYSGCLSSLK 164
+ D D N+ I ++E QELK +L + Y + ++
Sbjct: 288 EDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIR 347
Query: 165 QEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQ 224
+E ++KR+ GKLP + L WW H KWPYP++E K L + TGL KQINNWFINQ
Sbjct: 348 EEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEED-KARLVQETGLQLKQINNWFINQ 406
Query: 225 RKRHW 229
RKR+W
Sbjct: 407 RKRNW 411
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 132/251 (52%), Gaps = 34/251 (13%)
Query: 10 SSSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEVCASAASMGSGGSSCIG 65
S+S KA I+ HP Y +LLAA+ C +V P P + A+L ++ AA + G +
Sbjct: 115 SASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTLG--VVV 172
Query: 66 QDPALDQFMEAYCEMLTKYEQELSKPF----KEAMSFLQKIESQFKSLSISSPNSASSEA 121
+ LD FM Y +L ++++L EA++ +IE +SL+ SP+ ++ +
Sbjct: 173 DNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSESNGKT 232
Query: 122 I-----DRNGSSEED-FDVNIDFID---------PQAEDQ--------ELKGQLLRRYSG 158
+ D SE + FD ++D D P ++ ELK +L + +
Sbjct: 233 MSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGFKE 292
Query: 159 CLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQIN 218
+ +++E M+KR+ GKLP + L +WW H KWPYP++E K L + TGL KQIN
Sbjct: 293 KIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEED-KAKLVQETGLQLKQIN 351
Query: 219 NWFINQRKRHW 229
NWFINQRKR+W
Sbjct: 352 NWFINQRKRNW 362
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 129/245 (52%), Gaps = 30/245 (12%)
Query: 14 KAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARL---EEVCASAASMGSGGSSCIGQ 66
KA+I++HP Y +LL+A+ C ++ P P + A+L + V A +++ + G
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQGLLAGD 183
Query: 67 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMSFLQKIESQFKSLSISSPNSASSEAI 122
D LD FM Y +L ++++L + + EA+ +IE +S + SP + +
Sbjct: 184 DKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEGTGATM 243
Query: 123 --DRNGSSEED---FDVNID------FIDPQAED-------QELKGQLLRRYSGCLSSLK 164
D + E D FD ++D + ++E QELK +L + Y + ++
Sbjct: 244 SEDEDEQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIR 303
Query: 165 QEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQ 224
+E ++KR+ GKLP + L WW H KWPYP++E K L + TGL KQINNWFINQ
Sbjct: 304 EEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEED-KARLVQETGLQLKQINNWFINQ 362
Query: 225 RKRHW 229
RKR+W
Sbjct: 363 RKRNW 367
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
GN=OSH45 PE=2 SV=2
Length = 374
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 130/244 (53%), Gaps = 29/244 (11%)
Query: 14 KAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEVCASAASMGSGGSSCIGQDP- 68
KA+I+AHP Y +LL+A+ C ++ P P + A+L + A + ++ G D
Sbjct: 109 KAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDDGR 168
Query: 69 ALDQFMEAYCEMLTKYEQELSKPFK----EAMSFLQKIESQFKSLSISSPNSAS----SE 120
LDQFM Y +L ++++L + + EA+ ++E +SL+ +SP + S+
Sbjct: 169 ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSD 228
Query: 121 AIDRNGSSEED-FDVNIDFID------PQAED--------QELKGQLLRRYSGCLSSLKQ 165
D SE + +D ++D D P + QELK +L + Y L +++
Sbjct: 229 GEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHELKQGYKEKLIDIRE 288
Query: 166 EFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQR 225
E ++KR+ GKLP + L WW H KWPYP++E K L + TGL KQINNWFINQR
Sbjct: 289 EILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEED-KARLVQETGLQLKQINNWFINQR 347
Query: 226 KRHW 229
KR+W
Sbjct: 348 KRNW 351
>sp|P56667|KNX10_MAIZE Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10
PE=3 SV=1
Length = 88
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 144 EDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQK 203
ED +LK +LL +YSG LSSL +E +K+KKGKLP++ARQ+LL WW HY+WPYPS E +K
Sbjct: 1 EDNDLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS-ELEK 59
Query: 204 LALAESTGLDSKQINNWFINQRKRHWK 230
ALAESTGL++KQINNWFINQRKRHWK
Sbjct: 60 AALAESTGLEAKQINNWFINQRKRHWK 86
>sp|P56662|KNOX4_MAIZE Homeobox protein knotted-1-like 4 (Fragment) OS=Zea mays GN=KNOX4
PE=2 SV=1
Length = 85
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 78/86 (90%), Gaps = 1/86 (1%)
Query: 147 ELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLAL 206
ELK QLL++YSG LSSL+QEF KK+KKGKLPKEARQ+LL WW HYKWPYPS E++K+AL
Sbjct: 1 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS-ETEKIAL 59
Query: 207 AESTGLDSKQINNWFINQRKRHWKPS 232
AE+TGLD KQINNWFINQRKRHWKPS
Sbjct: 60 AEATGLDQKQINNWFINQRKRHWKPS 85
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 127/256 (49%), Gaps = 47/256 (18%)
Query: 13 VKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARL---EEVCASAASMGSGGSSCIG 65
+K +I HP Y +LLAA+ C +V P P + A+L + S AS G S
Sbjct: 31 MKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVGFSHHDR 90
Query: 66 QDPALDQFMEAYCEMLTKYEQELSKPFK----EAMSFLQKIESQFKSLSISSPNSASSEA 121
Q+ LD F+ Y +L ++++L + + EA+ ++IE+ SL+ ++ S
Sbjct: 91 QE--LDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGAT 148
Query: 122 IDRNGSSEEDFDVNIDFI-DPQAED---------------------------QELKGQLL 153
+ SE++ D+ +DF D D QELK +L
Sbjct: 149 M-----SEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELK 203
Query: 154 RRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLD 213
+ + + +++E M+KR+ GKLP + L +WW +H KWPYP+ E K L E TGL
Sbjct: 204 QGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT-EDDKAKLVEETGLQ 262
Query: 214 SKQINNWFINQRKRHW 229
KQINNWFINQRKR+W
Sbjct: 263 LKQINNWFINQRKRNW 278
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 127/253 (50%), Gaps = 42/253 (16%)
Query: 13 VKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLE-EVCASAASMGSGGSSCIG---QDP 68
+K +I HP Y +LLAA+ C +V P + + +E ++ S + S S+ +G
Sbjct: 29 LKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDRH 88
Query: 69 ALDQFMEAYCEMLTKYEQELSKPFK----EAMSFLQKIESQFKSLSISSPNSASSEAIDR 124
LD F+ Y +L ++++L + + EA+ ++IE+ SL+ ++ S +
Sbjct: 89 ELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATM-- 146
Query: 125 NGSSEEDFDVNIDFI-DPQAED---------------------------QELKGQLLRRY 156
SE++ D+ +DF D D QELK +L + +
Sbjct: 147 ---SEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGF 203
Query: 157 SGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQ 216
+ +++E M+KR+ GKLP + L +WW +H KWPYP+ E K L E TGL KQ
Sbjct: 204 KSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT-EDDKAKLVEETGLQLKQ 262
Query: 217 INNWFINQRKRHW 229
INNWFINQRKR+W
Sbjct: 263 INNWFINQRKRNW 275
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 33/247 (13%)
Query: 14 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQ------D 67
KA I+ HP Y +LL+A+ +C ++ P + + R++ A + ++ S +GQ D
Sbjct: 164 KADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNV-VAKYSVLGQGQPPLDD 222
Query: 68 PALDQFMEAYCEMLTKYEQELSKPFK----EAMSFLQKIESQFKSLSISSPNSASSEAID 123
LDQFM Y +L+ ++++L + + EA+ ++E +SL+ +P + +
Sbjct: 223 KDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGTGATMS 282
Query: 124 RNGSSEEDFDVNI---DFIDPQAED------------------QELKGQLLRRYSGCLSS 162
+ + D D N F P + QELK +L + Y +
Sbjct: 283 DDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVD 342
Query: 163 LKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFI 222
+++E ++KR+ GKLP + L WW H KWPYP++E K L + TGL KQINNWFI
Sbjct: 343 IREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEED-KARLVQETGLQLKQINNWFI 401
Query: 223 NQRKRHW 229
NQRKR+W
Sbjct: 402 NQRKRNW 408
>sp|P56661|KNOX3_MAIZE Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3
PE=2 SV=1
Length = 88
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
Query: 144 EDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQK 203
+D+ELK QLLR+YSGCL +L++E KKRKK KLPKEARQ+LL WW HY+WPYPS E +K
Sbjct: 1 DDKELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPS-EMEK 59
Query: 204 LALAESTGLDSKQINNWFINQRKRHWKPS 232
+ALAESTGL+ KQINNWFINQRKRHWKPS
Sbjct: 60 IALAESTGLEQKQINNWFINQRKRHWKPS 88
>sp|P56666|KNOX8_MAIZE Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8
PE=2 SV=1
Length = 85
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Query: 147 ELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLAL 206
ELK QLLR+Y G L L+QEF K++KKGKLPKEARQ+LL WW HYKWPYPS E++K+AL
Sbjct: 1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPS-ETEKMAL 59
Query: 207 AESTGLDSKQINNWFINQRKRHWKPS 232
AE+TGLD KQINNWFINQRKRHWKP+
Sbjct: 60 AETTGLDPKQINNWFINQRKRHWKPA 85
>sp|P56668|KNX11_MAIZE Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11
PE=3 SV=1
Length = 88
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Query: 145 DQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKL 204
D+ELK LL++YSGCLS L+ EF+KKRKKGKLPK+AR L+DWW+ HY+WPYP++E K+
Sbjct: 2 DRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEED-KV 60
Query: 205 ALAESTGLDSKQINNWFINQRKRHWKPS 232
LA +TGLD KQINNWFINQRKRHWKPS
Sbjct: 61 RLAAATGLDPKQINNWFINQRKRHWKPS 88
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
GN=HOS59 PE=2 SV=2
Length = 323
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 121/250 (48%), Gaps = 36/250 (14%)
Query: 14 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLE---------EVCASAASMGSGGSSCI 64
KA I AHP Y RLL A+ C +V P + + R++ A+AA+ +
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAP 107
Query: 65 GQDPALDQFMEAYCEMLTKYEQELSKPFK----EAMSFLQKIESQFKSLSISSPNSASSE 120
LD FM Y +L ++++L + + EA+ ++E +SL+ +SP S
Sbjct: 108 SGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGA 167
Query: 121 AIDRNGSSEEDFDVNIDFIDPQAED---------------------QELKGQLLRRYSGC 159
+ + ++ D + N+ F D QELK +L + Y
Sbjct: 168 TMSDDEDNQVDSESNM-FDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREK 226
Query: 160 LSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINN 219
L +++E ++KR+ GKLP + L WW H KWPYP++E K L + TGL KQINN
Sbjct: 227 LVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEED-KARLVQETGLQLKQINN 285
Query: 220 WFINQRKRHW 229
WFINQRKR+W
Sbjct: 286 WFINQRKRNW 295
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
GN=HOS58 PE=2 SV=2
Length = 313
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 118/246 (47%), Gaps = 32/246 (13%)
Query: 14 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQDPA---- 69
KA + AHP Y RLL A+ C +V P + + R++ A+ + S+
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGGE 102
Query: 70 -LDQFMEAYCEMLTKYEQELSKPFK----EAMSFLQKIESQFKSLSISSPNSASSEAIDR 124
LD FM Y +L ++++L + + EA+ ++E +SL+ +SP + +
Sbjct: 103 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSD 162
Query: 125 NGSSEEDFDVNIDFIDPQAED---------------------QELKGQLLRRYSGCLSSL 163
+ ++ D + N+ F D ELK +L + Y L +
Sbjct: 163 DEDNQVDSEANM-FDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDI 221
Query: 164 KQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFIN 223
++E ++KR+ GKLP + L WW H KWPYP+ E K L + TGL KQINNWFIN
Sbjct: 222 REEILRKRRAGKLPGDTASILKAWWQAHSKWPYPT-EDDKARLVQETGLQLKQINNWFIN 280
Query: 224 QRKRHW 229
QRKR+W
Sbjct: 281 QRKRNW 286
>sp|P56663|KNOX5_MAIZE Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5
PE=2 SV=1
Length = 85
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 147 ELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLAL 206
ELK LL++YSGCLS L+ EF+KKRKKGKLPK+AR L+DWW+ HY+WPYP++E K+ L
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEED-KVRL 59
Query: 207 AESTGLDSKQINNWFINQRKRHWKPS 232
A TGLD KQINNWFINQRKRHWKPS
Sbjct: 60 AAMTGLDPKQINNWFINQRKRHWKPS 85
>sp|P56669|HLG3_MAIZE Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3
SV=1
Length = 85
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 147 ELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLAL 206
ELK LL++YSGCLS L+ EF+KKRKKGKLPK+AR LL+WW+ HY+WPYP++E K+ L
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEED-KVRL 59
Query: 207 AESTGLDSKQINNWFINQRKRHWKPS 232
A TGLD KQINNWFINQRKRHWKPS
Sbjct: 60 AAMTGLDPKQINNWFINQRKRHWKPS 85
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
GN=HOS66 PE=2 SV=1
Length = 314
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 32/248 (12%)
Query: 13 VKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEVCASAASMGSGGSSCIG--Q 66
+K +I HP +L+AA+ C +V P P + A+L + S + +
Sbjct: 53 LKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHD 112
Query: 67 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMSFLQKIESQFKSLSISSPNSASSEAI 122
LD F+ Y +L + ++L + + EA+ ++IE + L+ ++ + +
Sbjct: 113 KQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATM 172
Query: 123 DRN--------------GSSEEDFDVNIDFIDPQAED-------QELKGQLLRRYSGCLS 161
+ GS D + +E QELK +L + + +
Sbjct: 173 SEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIE 232
Query: 162 SLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWF 221
+++E ++KR+ GKLP + L WW +H KWPYP+ E K L E TGL KQINNWF
Sbjct: 233 DVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT-EDDKAKLVEETGLQLKQINNWF 291
Query: 222 INQRKRHW 229
INQRKR+W
Sbjct: 292 INQRKRNW 299
>sp|P56660|KNOX2_MAIZE Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2
PE=2 SV=1
Length = 88
Score = 90.9 bits (224), Expect = 8e-18, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 146 QELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLA 205
QELK +L + Y L +++E ++KR+ GKLP + L WW H KWPYP++E K
Sbjct: 3 QELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEED-KAR 61
Query: 206 LAESTGLDSKQINNWFINQRKRHW 229
L + TGL KQINNWFINQRKR+W
Sbjct: 62 LVQETGLQLKQINNWFINQRKRNW 85
>sp|P56659|KNOX1_MAIZE Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1
PE=2 SV=1
Length = 88
Score = 89.4 bits (220), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 146 QELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLA 205
QELK +L + + + +++E ++KR+ GKLP + L WW +H KWPYP+ E K
Sbjct: 3 QELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPT-EDDKAK 61
Query: 206 LAESTGLDSKQINNWFINQRKRHW 229
L E TGL KQINNWFINQRKR+W
Sbjct: 62 LVEETGLQLKQINNWFINQRKRNW 85
>sp|P56665|KNOX7_MAIZE Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7
PE=2 SV=1
Length = 85
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 147 ELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLAL 206
ELK +L + Y L +++E M+KR+ GKLP + L WW H KWPYP+ E K L
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT-EDDKARL 59
Query: 207 AESTGLDSKQINNWFINQRKRHW 229
+ TGL KQINNWFINQRKR+W
Sbjct: 60 VQETGLQLKQINNWFINQRKRNW 82
>sp|P56664|KNOX6_MAIZE Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6
PE=2 SV=1
Length = 85
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 147 ELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLAL 206
ELK +L + Y L +++E M+KR+ GKLP + L WW H KWPYP+ E K L
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT-EDDKARL 59
Query: 207 AESTGLDSKQINNWFINQRKRHW 229
+ TGL KQINNWFINQRKR+W
Sbjct: 60 VQETGLQLKQINNWFINQRKRNW 82
>sp|Q54VB4|HBX9_DICDI Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1
Length = 639
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 167 FMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRK 226
+K++K+GKLP EA L W +H PYP++E +K+ALA ST L QINNWF N R+
Sbjct: 557 IVKRKKRGKLPGEATSILKKWLFEHNMHPYPTEE-EKVALANSTFLSFNQINNWFTNARR 615
Query: 227 R 227
R
Sbjct: 616 R 616
>sp|Q99687|MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3
Length = 375
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 163 LKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFI 222
L QE + +K+G PK A + W +H PYPS+E QK LA+ TGL Q+NNWFI
Sbjct: 256 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEE-QKKQLAQDTGLTILQVNNWFI 314
Query: 223 NQRKRHWKPSED 234
N R+R +P D
Sbjct: 315 NARRRIVQPMID 326
>sp|A6NDR6|ME3L1_HUMAN Putative homeobox protein Meis3-like 1 OS=Homo sapiens GN=MEIS3P1
PE=5 SV=2
Length = 274
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 163 LKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFI 222
L QE + +K+G PK A + W +H PYPS+E QK LA+ TGL Q+NNWFI
Sbjct: 155 LDQEPRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEE-QKKQLAQDTGLTILQVNNWFI 213
Query: 223 NQRKRHWKPSED 234
N R+R +P D
Sbjct: 214 NARRRIVQPMID 225
>sp|P97368|MEIS3_MOUSE Homeobox protein Meis3 OS=Mus musculus GN=Meis3 PE=2 SV=2
Length = 378
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 163 LKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFI 222
L E + +K+G PK A + W +H PYPS+E QK LA+ TGL Q+NNWFI
Sbjct: 259 LDLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEE-QKKQLAQDTGLTILQVNNWFI 317
Query: 223 NQRKRHWKPSED 234
N R+R +P D
Sbjct: 318 NARRRIVQPMID 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,364,756
Number of Sequences: 539616
Number of extensions: 3899842
Number of successful extensions: 12225
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 11847
Number of HSP's gapped (non-prelim): 301
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)