Citrus Sinensis ID: 024428

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
METNYGSGASSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQDPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSEAIDRNGSSEEDFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQPQYYIDSTVMGNPFPMDLSPAPLL
ccccccccccHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccHHHccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHcccccccccccccccccccccccccccc
***************KIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCAS**********CIGQDPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLS*****************************************LLRRYSGCL*******************ARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQPQYYIDSTV**********PA***
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METNYGSGASSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEVCASAASMGSGGSSCIGQDPALDQFMEAYCEMLTKYEQELSKPFKEAMSFLQKIESQFKSLSISSPNSASSEAIDRNGSSEEDFDVNIDFIDPQAEDQELKGQLLRRYSGCLSSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSQESQKLALAESTGLDSKQINNWFINQRKRHWKPSEDMQFMVMDATQPQYYIDSTVMGNPFPMDLSPAPLL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Homeobox protein SHOOT MERISTEMLESS Required for shoot apical meristem (SAM) formation during embryogenesis. Negatively regulates ASYMMETRIC LEAVES1 (AS1) and ASYMMETRIC LEAVES2 (AS2 or LBD6). Probably binds to the DNA sequence 5'-TGAC-3'.probableQ38874
Homeobox protein SBH1 Possible transcription activator involved in early embryonic development. Probably binds to the DNA sequence 5'-TGAC-3'.probableP46608
Homeobox protein SHOOT MERISTEMLESS Required for shoot apical meristem formation during embryogenesis. Probably binds to the DNA sequence 5'-TGAC-3'.probableQ9M6D9

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DMN, chain A
Confidence level:very confident
Coverage over the Query: 168-234
View the alignment between query and template
View the model in PyMOL
Template: 1QZV, chain F
Confidence level:probable
Coverage over the Query: 112-129
View the alignment between query and template
View the model in PyMOL