Query 024429
Match_columns 268
No_of_seqs 386 out of 2263
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 04:32:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024429.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024429hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0717 Molecular chaperone (D 100.0 1.2E-29 2.5E-34 237.3 16.2 159 73-236 5-217 (508)
2 COG0484 DnaJ DnaJ-class molecu 99.9 4.3E-26 9.3E-31 211.9 8.2 98 74-182 2-100 (371)
3 KOG0713 Molecular chaperone (D 99.9 2E-23 4.3E-28 190.0 6.8 72 73-150 13-84 (336)
4 COG5269 ZUO1 Ribosome-associat 99.9 4.2E-22 9.2E-27 176.0 11.0 175 74-252 41-247 (379)
5 PRK14288 chaperone protein Dna 99.8 1.2E-21 2.6E-26 184.6 6.9 70 75-150 2-71 (369)
6 PRK14296 chaperone protein Dna 99.8 3.2E-21 6.9E-26 181.9 6.8 69 75-150 3-71 (372)
7 PRK14286 chaperone protein Dna 99.8 8.1E-21 1.8E-25 179.2 6.3 70 75-150 3-72 (372)
8 KOG0712 Molecular chaperone (D 99.8 1.2E-20 2.6E-25 173.5 6.9 70 74-152 2-71 (337)
9 PRK14285 chaperone protein Dna 99.8 2.3E-20 5.1E-25 175.7 6.0 69 76-150 3-71 (365)
10 PRK14287 chaperone protein Dna 99.8 9.9E-20 2.1E-24 171.8 8.1 69 75-150 3-71 (371)
11 PRK14282 chaperone protein Dna 99.8 8.9E-20 1.9E-24 172.0 7.2 71 75-150 3-73 (369)
12 PRK14294 chaperone protein Dna 99.8 1.1E-19 2.3E-24 171.3 7.3 70 75-150 3-72 (366)
13 PRK14276 chaperone protein Dna 99.8 9.2E-20 2E-24 172.5 6.2 69 75-150 3-71 (380)
14 PTZ00037 DnaJ_C chaperone prot 99.8 1.5E-19 3.2E-24 172.8 7.7 67 74-150 26-92 (421)
15 PRK14301 chaperone protein Dna 99.8 1.4E-19 3.1E-24 170.8 7.3 70 75-150 3-72 (373)
16 KOG0691 Molecular chaperone (D 99.8 1.4E-18 3E-23 158.2 13.2 72 75-152 4-75 (296)
17 PRK14278 chaperone protein Dna 99.8 1.9E-19 4.1E-24 170.3 7.6 68 76-150 3-70 (378)
18 PRK14298 chaperone protein Dna 99.8 2.2E-19 4.8E-24 169.7 8.0 99 75-183 4-102 (377)
19 PRK14279 chaperone protein Dna 99.8 1.7E-19 3.7E-24 171.2 6.6 69 75-149 8-76 (392)
20 KOG0719 Molecular chaperone (D 99.8 2.3E-18 5E-23 149.6 12.2 87 74-164 12-100 (264)
21 PRK14297 chaperone protein Dna 99.8 2E-19 4.3E-24 170.2 5.8 70 75-150 3-72 (380)
22 PRK14284 chaperone protein Dna 99.8 3.4E-19 7.3E-24 169.3 7.3 69 76-150 1-69 (391)
23 PTZ00341 Ring-infected erythro 99.8 7.2E-18 1.6E-22 170.5 15.8 72 73-151 570-641 (1136)
24 PRK14291 chaperone protein Dna 99.8 5.1E-19 1.1E-23 167.5 7.2 69 75-150 2-70 (382)
25 PRK14281 chaperone protein Dna 99.8 9.4E-19 2E-23 166.5 8.1 69 76-150 3-71 (397)
26 PRK14280 chaperone protein Dna 99.8 1.3E-18 2.7E-23 164.5 8.4 69 75-150 3-71 (376)
27 PRK10767 chaperone protein Dna 99.8 8.2E-19 1.8E-23 165.6 6.9 70 75-150 3-72 (371)
28 PRK14277 chaperone protein Dna 99.7 1.8E-18 3.9E-23 164.1 7.5 70 75-150 4-73 (386)
29 PF00226 DnaJ: DnaJ domain; I 99.7 1.6E-18 3.5E-23 123.4 5.4 64 77-145 1-64 (64)
30 KOG0716 Molecular chaperone (D 99.7 1.4E-18 3E-23 154.1 5.8 70 75-150 30-99 (279)
31 PRK14283 chaperone protein Dna 99.7 2.4E-18 5.3E-23 162.7 7.3 69 75-150 4-72 (378)
32 PRK14290 chaperone protein Dna 99.7 2.5E-18 5.4E-23 162.0 7.2 70 76-150 3-72 (365)
33 TIGR02349 DnaJ_bact chaperone 99.7 1.7E-18 3.7E-23 162.5 6.1 67 77-150 1-67 (354)
34 PRK14299 chaperone protein Dna 99.7 3.3E-18 7.2E-23 156.5 7.2 69 75-150 3-71 (291)
35 PRK14295 chaperone protein Dna 99.7 3.3E-18 7.2E-23 162.3 7.1 70 75-150 8-81 (389)
36 PRK14293 chaperone protein Dna 99.7 1.8E-17 3.9E-22 156.6 8.0 68 76-150 3-70 (374)
37 KOG0718 Molecular chaperone (D 99.7 1.2E-17 2.6E-22 157.1 5.5 76 74-152 7-82 (546)
38 PRK14289 chaperone protein Dna 99.7 2.6E-17 5.6E-22 156.1 7.4 70 75-150 4-73 (386)
39 KOG0715 Molecular chaperone (D 99.7 3.2E-17 6.9E-22 149.7 7.6 70 75-151 42-111 (288)
40 PRK14300 chaperone protein Dna 99.7 3.6E-17 7.8E-22 154.5 6.8 68 76-150 3-70 (372)
41 PRK10266 curved DNA-binding pr 99.7 4.8E-17 1E-21 149.9 6.5 68 75-149 3-70 (306)
42 PRK14292 chaperone protein Dna 99.7 6.2E-17 1.3E-21 152.8 6.8 68 76-150 2-69 (371)
43 smart00271 DnaJ DnaJ molecular 99.6 2.1E-16 4.6E-21 110.7 5.9 59 76-139 1-59 (60)
44 KOG0721 Molecular chaperone (D 99.6 5E-16 1.1E-20 133.9 9.1 75 74-154 97-171 (230)
45 PHA03102 Small T antigen; Revi 99.6 4.4E-16 9.5E-21 129.4 7.1 71 75-155 4-76 (153)
46 cd06257 DnaJ DnaJ domain or J- 99.6 7.6E-16 1.7E-20 106.0 6.3 55 77-137 1-55 (55)
47 TIGR03835 termin_org_DnaJ term 99.6 5.9E-15 1.3E-19 146.7 8.9 69 76-151 2-70 (871)
48 COG2214 CbpA DnaJ-class molecu 99.6 4.6E-15 1E-19 127.1 6.9 68 74-147 4-72 (237)
49 PRK03578 hscB co-chaperone Hsc 99.5 1.8E-13 3.8E-18 116.7 14.1 74 74-148 4-79 (176)
50 PRK05014 hscB co-chaperone Hsc 99.5 1.3E-14 2.8E-19 123.2 6.7 73 76-149 1-75 (171)
51 PRK01356 hscB co-chaperone Hsc 99.5 2.7E-13 5.9E-18 114.6 13.4 71 76-149 2-74 (166)
52 KOG0624 dsRNA-activated protei 99.5 9.8E-15 2.1E-19 134.0 2.6 75 72-149 390-464 (504)
53 PRK00294 hscB co-chaperone Hsc 99.5 6.6E-14 1.4E-18 119.0 7.3 75 74-149 2-78 (173)
54 KOG0550 Molecular chaperone (D 99.4 7.8E-14 1.7E-18 130.4 4.4 77 71-152 368-444 (486)
55 KOG0720 Molecular chaperone (D 99.4 2E-13 4.3E-18 128.8 5.6 70 74-150 233-302 (490)
56 KOG0722 Molecular chaperone (D 99.4 3.4E-13 7.4E-18 118.9 3.6 75 69-150 26-100 (329)
57 PRK09430 djlA Dna-J like membr 99.4 7.1E-13 1.5E-17 120.0 5.5 65 73-137 197-262 (267)
58 PHA02624 large T antigen; Prov 99.3 1.9E-12 4.2E-17 127.4 7.5 85 74-168 9-98 (647)
59 KOG0714 Molecular chaperone (D 99.3 1.2E-12 2.7E-17 117.2 5.0 70 75-149 2-71 (306)
60 PTZ00100 DnaJ chaperone protei 99.3 3E-12 6.4E-17 101.5 5.4 52 75-136 64-115 (116)
61 COG5407 SEC63 Preprotein trans 99.2 1.2E-11 2.5E-16 116.7 5.4 79 74-153 96-174 (610)
62 PRK01773 hscB co-chaperone Hsc 99.2 2.5E-11 5.5E-16 103.2 6.7 73 76-149 2-76 (173)
63 KOG1150 Predicted molecular ch 99.1 1.2E-09 2.6E-14 93.5 12.0 68 73-145 50-117 (250)
64 TIGR00714 hscB Fe-S protein as 99.1 2.6E-09 5.5E-14 89.6 13.5 61 88-149 3-63 (157)
65 KOG1789 Endocytosis protein RM 98.2 1.9E-06 4.2E-11 88.7 5.8 58 72-138 1277-1338(2235)
66 KOG0568 Molecular chaperone (D 98.2 1.4E-06 3.1E-11 76.5 3.6 74 58-138 29-103 (342)
67 KOG0723 Molecular chaperone (D 97.8 3.2E-05 7E-10 60.1 5.4 53 76-138 56-108 (112)
68 KOG3192 Mitochondrial J-type c 97.6 9.8E-05 2.1E-09 61.2 4.5 74 73-147 5-80 (168)
69 COG1076 DjlA DnaJ-domain-conta 97.1 0.00026 5.7E-09 60.2 2.2 62 74-135 111-173 (174)
70 KOG0431 Auxilin-like protein a 96.9 0.00093 2E-08 65.0 4.0 53 84-136 396-449 (453)
71 COG1076 DjlA DnaJ-domain-conta 96.2 0.0031 6.7E-08 53.6 2.3 72 77-149 2-75 (174)
72 KOG0724 Zuotin and related mol 95.1 0.01 2.2E-07 55.3 1.5 62 87-150 3-64 (335)
73 PF03656 Pam16: Pam16; InterP 93.5 0.14 3.1E-06 41.4 4.9 56 74-139 56-111 (127)
74 PF13446 RPT: A repeated domai 82.0 2.7 5.9E-05 29.2 4.1 28 75-102 4-31 (62)
75 PF14687 DUF4460: Domain of un 81.5 2.6 5.7E-05 33.3 4.3 53 86-140 4-56 (112)
76 PF11833 DUF3353: Protein of u 69.7 8.5 0.00018 33.4 4.7 39 85-137 1-39 (194)
77 PF10252 PP28: Casein kinase s 44.2 97 0.0021 23.2 5.9 52 202-253 25-80 (82)
78 KOG1029 Endocytic adaptor prot 43.5 80 0.0017 33.2 7.0 31 230-260 376-406 (1118)
79 COG5552 Uncharacterized conser 42.5 81 0.0018 23.2 5.1 35 76-110 3-37 (88)
80 PF07709 SRR: Seven Residue Re 40.5 19 0.0004 17.7 1.1 13 124-136 2-14 (14)
81 PF10041 DUF2277: Uncharacteri 30.3 1.7E+02 0.0037 21.6 5.2 34 77-110 4-37 (78)
82 KOG2689 Predicted ubiquitin re 27.8 2.3E+02 0.0049 26.1 6.7 28 210-237 116-145 (290)
83 KOG3442 Uncharacterized conser 26.6 83 0.0018 25.4 3.3 36 76-111 59-94 (132)
84 PRK11508 sulfur transfer prote 24.5 47 0.001 26.2 1.5 18 247-264 25-42 (109)
85 cd00084 HMG-box High Mobility 23.6 2.2E+02 0.0048 18.7 4.8 42 94-146 12-53 (66)
86 PTZ00046 rifin; Provisional 23.3 3.8E+02 0.0083 25.6 7.6 52 202-253 53-110 (358)
87 PF12434 Malate_DH: Malate deh 22.9 94 0.002 18.3 2.2 17 90-106 10-26 (28)
88 TIGR03342 dsrC_tusE_dsvC sulfu 22.8 52 0.0011 25.9 1.5 18 247-264 24-41 (108)
89 PF07739 TipAS: TipAS antibiot 21.1 2.6E+02 0.0057 21.0 5.3 51 83-148 51-103 (118)
90 cd01388 SOX-TCF_HMG-box SOX-TC 20.3 2.5E+02 0.0055 19.5 4.6 41 95-146 14-54 (72)
91 KOG3375 Phosphoprotein/predict 20.2 3.8E+02 0.0083 22.4 6.1 54 202-255 107-164 (174)
No 1
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.2e-29 Score=237.32 Aligned_cols=159 Identities=28% Similarity=0.391 Sum_probs=115.7
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC--
Q 024429 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV-- 150 (268)
Q Consensus 73 ~~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~-- 150 (268)
...++||+||||.++|++.+||++||+|||+||||+++.. .++++++|+.|+.||+|||||..|+|||++...
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~-----ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil 79 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDR-----IEEATQQFQLIQAAYEVLSDPQERAWYDSHREQIL 79 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCcc-----HHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHh
Confidence 3568999999999999999999999999999999998875 688999999999999999999999999997531
Q ss_pred --CCC---cchHHHHHHHHH-hhhccccc--------hH----------------------------------HHHHHHh
Q 024429 151 --NPM---KASQAWMEWLIK-KRKAFDQR--------GD----------------------------------MAIAAWA 182 (268)
Q Consensus 151 --~~~---~~~~~~~~~~~~-~~~~f~~~--------~~----------------------------------~f~~~~~ 182 (268)
.+. ....+.+.||.. +..+|+.. ++ -|+.+|.
T Consensus 80 ~~~~s~~~~~~~dlf~ff~~~~y~gy~~~~~gfy~vy~dvf~~~~~~e~~~~~d~~~~ap~fg~~~t~ye~~~~fY~~W~ 159 (508)
T KOG0717|consen 80 RGKNSDTGVQIEDLFQFFTSSCYIGYENTSAGFYRVYQDVFNALASDELPFLGDSKLLYPLFGYSTTDYEQVVPFYQFWL 159 (508)
T ss_pred cCCCCccccchHHHHHHhhhhhhcccccccchhHHHHHHHHHHHhhhhhhhccCCccccccccCCCCcHHHHHHHHHHHH
Confidence 111 112223333221 11111111 11 3445555
Q ss_pred hhhHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhh
Q 024429 183 EQQQLELNLRARRLSRSKIDPEEERKILAREMKASK----EYFTNTMKRHTLVLKKRD 236 (268)
Q Consensus 183 ~~~~~e~~~~~~~~~~~~~~~r~erR~~ekenk~~r----ke~~~~ir~lv~~~~krD 236 (268)
.+...--.............+|..+|+|+++|+++| +|||.+||.||.||+|||
T Consensus 160 afsT~Ksf~W~d~Ydv~~~~~r~~~R~v~~enkk~rq~ak~eyNe~Vr~lv~fvkKrD 217 (508)
T KOG0717|consen 160 AFSTKKSFEWLDEYDVEEESDRFTRRLMERENKKQRQYARQEYNETVRNLVGFVKKRD 217 (508)
T ss_pred hhhhhhhHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 554431111122222222388999999999999999 999999999999999999
No 2
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=4.3e-26 Score=211.92 Aligned_cols=98 Identities=38% Similarity=0.553 Sum_probs=81.5
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCC
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (268)
..+|||+||||+++||.+|||+|||+||++||||+|++ .++|+++|++|++||+|||||++|+.||++|.....
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g------~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~ 75 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPG------DKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFK 75 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------CHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccc
Confidence 36899999999999999999999999999999999986 478999999999999999999999999999987654
Q ss_pred cchHHHHHHHHHhhhccc-cchHHHHHHHh
Q 024429 154 KASQAWMEWLIKKRKAFD-QRGDMAIAAWA 182 (268)
Q Consensus 154 ~~~~~~~~~~~~~~~~f~-~~~~~f~~~~~ 182 (268)
.++.. .+ ....|+ +++|+|..||+
T Consensus 76 ~gg~g--g~---g~~~fgg~~~DIF~~~Fg 100 (371)
T COG0484 76 AGGFG--GF---GFGGFGGDFGDIFEDFFG 100 (371)
T ss_pred cCCcC--CC---CcCCCCCCHHHHHHHhhc
Confidence 22211 11 112344 57899999995
No 3
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=2e-23 Score=190.01 Aligned_cols=72 Identities=40% Similarity=0.634 Sum_probs=68.2
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 73 ~~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
...+|||+||||+++|+..|||+|||+||++||||||++ .+.|.+.|+.|+.||+|||||.+|+.||.+|..
T Consensus 13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpd------dp~A~e~F~~in~AYEVLsDpekRk~YD~~GEe 84 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPD------DPNANEKFKEINAAYEVLSDPEKRKHYDTYGEE 84 (336)
T ss_pred hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------CHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHh
Confidence 357999999999999999999999999999999999998 688999999999999999999999999998854
No 4
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=4.2e-22 Score=176.03 Aligned_cols=175 Identities=21% Similarity=0.234 Sum_probs=133.1
Q ss_pred CCCCccccccCCC---CCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 74 DEKSPYETLELER---DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 74 ~~~d~Y~iLgl~~---~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
...|+|.+|||+. .+++.+|.++.++.+.+||||+....| .....+.|++|+.||+||+|+.+|..||+....
T Consensus 41 k~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g----~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df~ 116 (379)
T COG5269 41 KKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGG----NKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFD 116 (379)
T ss_pred hhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccC----CCCcHHHHHHHHHHHHHhccHHHHhhccccccc
Confidence 3599999999987 789999999999999999999986655 345789999999999999999999999997654
Q ss_pred CCCcch--HHHHHHHHHhhhccccc---------------------hHHHHHHHhhhhHHHHHHHHHHhhhccCCCHHHH
Q 024429 151 NPMKAS--QAWMEWLIKKRKAFDQR---------------------GDMAIAAWAEQQQLELNLRARRLSRSKIDPEEER 207 (268)
Q Consensus 151 ~~~~~~--~~~~~~~~~~~~~f~~~---------------------~~~f~~~~~~~~~~e~~~~~~~~~~~~~~~r~er 207 (268)
....++ ....+||..+.+.|+.. .+-|+.||.++.+.--.+...+.-...+++|.-.
T Consensus 117 advppp~~~t~~~Ffe~w~pvFe~earFSkKqPvPsLg~~dss~keVe~FY~FW~nFdSWRtFE~lded~pdd~e~rD~k 196 (379)
T COG5269 117 ADVPPPRIYTPDEFFEVWEPVFEREARFSKKQPVPSLGPSDSSLKEVEEFYEFWSNFDSWRTFEPLDEDYPDDMEERDRK 196 (379)
T ss_pred cCCCCccCCCchhHHHHHHHHHHhhhhccccCCCCCCCCchhHHHHHHHHHHHHHhccccccccchhhhcCcchhhhhhH
Confidence 332222 22244555555555522 4568899999987522222222223335788999
Q ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHhhh--hhhhhhHHHHHHHHHH
Q 024429 208 KILAREMKASK----EYFTNTMKRHTLVLKKRD--LMRRKAEEEKRKAIGR 252 (268)
Q Consensus 208 R~~ekenk~~r----ke~~~~ir~lv~~~~krD--~~~~~~ee~~~k~~~~ 252 (268)
|..|+.|+..| -.-|.+|++||+.|.++| |+-+++++++.+.+++
T Consensus 197 ry~e~KNr~~r~k~K~~DnaRl~~LV~~A~~~DPRIK~fkEqeK~~k~~rk 247 (379)
T COG5269 197 RYSEAKNREKRAKLKNQDNARLKRLVQIAKKRDPRIKSFKEQEKEMKKIRK 247 (379)
T ss_pred HHHHhhhHHHHHhhhchhHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHhc
Confidence 99999999988 567889999999999999 7778887776666654
No 5
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=1.2e-21 Score=184.60 Aligned_cols=70 Identities=46% Similarity=0.683 Sum_probs=65.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++||.+|||+|||+||++||||+++. .+.++++|++|++||+||+||.+|+.||.+|..
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~------~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~ 71 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAG------DKEAEEKFKLINEAYGVLSDEKKRALYDRYGKK 71 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC------ccHHHHHHHHHHHHHHHhccHHHHHHHHHhccc
Confidence 3799999999999999999999999999999999875 346899999999999999999999999998864
No 6
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=3.2e-21 Score=181.92 Aligned_cols=69 Identities=39% Similarity=0.701 Sum_probs=64.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+||++||||+++. +.|+++|+.|++||+||+||.+|+.||.+|..
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-------~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~ 71 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-------PDAHDKMVEINEAADVLLDKDKRKQYDQFGHA 71 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------chHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence 4799999999999999999999999999999999863 35889999999999999999999999998864
No 7
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=8.1e-21 Score=179.21 Aligned_cols=70 Identities=41% Similarity=0.707 Sum_probs=65.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+||++||||+++. .+.+.++|++|++||+||+||.+|+.||.+|..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~------~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 72 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKG------NKESEEKFKEATEAYEILRDPKKRQAYDQFGKA 72 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC------chHHHHHHHHHHHHHHHhccHHHHHHHHHhCch
Confidence 4799999999999999999999999999999999875 356899999999999999999999999998864
No 8
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=1.2e-20 Score=173.49 Aligned_cols=70 Identities=43% Similarity=0.613 Sum_probs=65.3
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP 152 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 152 (268)
..+.||+||||+++||.+|||+|||+|+++||||||++ +.++|++|+.||+|||||++|..||.+|....
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---------~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~ 71 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---------AGEKFKEISQAYEVLSDPEKREIYDQYGEEGL 71 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---------HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence 36789999999999999999999999999999999986 68999999999999999999999999986533
No 9
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=2.3e-20 Score=175.68 Aligned_cols=69 Identities=42% Similarity=0.691 Sum_probs=64.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
.|||+||||+++||.++||+|||+|+++||||++++ .+.+.++|++|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~------~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~ 71 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKG------NKEAESIFKEATEAYEVLIDDNKRAQYDRFGHT 71 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC------CHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcc
Confidence 699999999999999999999999999999999875 356889999999999999999999999998864
No 10
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=9.9e-20 Score=171.78 Aligned_cols=69 Identities=38% Similarity=0.689 Sum_probs=64.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+||++||||+++. +.++++|+.|++||+||+||.+|+.||.+|..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~ 71 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-------PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHT 71 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCc
Confidence 4799999999999999999999999999999999863 35789999999999999999999999998865
No 11
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=8.9e-20 Score=172.00 Aligned_cols=71 Identities=45% Similarity=0.644 Sum_probs=65.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+|+++||||+++.. ...+.++|++|++||+||+||.+|+.||.++..
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-----~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~ 73 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN-----RKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYV 73 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc-----hhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcc
Confidence 47999999999999999999999999999999998652 345889999999999999999999999998864
No 12
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=1.1e-19 Score=171.34 Aligned_cols=70 Identities=43% Similarity=0.648 Sum_probs=65.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+||++||||+++. .+.+.+.|+.|++||+||+||.+|+.||.+|..
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~------~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~ 72 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPG------DKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHE 72 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC------chHHHHHHHHHHHHHHHhccHHHHHHHHhhccc
Confidence 4799999999999999999999999999999999875 346889999999999999999999999998865
No 13
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=9.2e-20 Score=172.51 Aligned_cols=69 Identities=39% Similarity=0.672 Sum_probs=64.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++||.+|||+|||+|+++||||+++. +.++++|+.|++||+||+||.+|+.||.+|..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 71 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-------PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAA 71 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCc
Confidence 4799999999999999999999999999999999864 35789999999999999999999999998864
No 14
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.79 E-value=1.5e-19 Score=172.77 Aligned_cols=67 Identities=42% Similarity=0.609 Sum_probs=62.2
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
...|||+||||+++||.++||+|||+||++||||++++ .++|+.|++||+||+||.+|+.||.+|..
T Consensus 26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----------~e~F~~i~~AYevLsD~~kR~~YD~~G~~ 92 (421)
T PTZ00037 26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----------PEKFKEISRAYEVLSDPEKRKIYDEYGEE 92 (421)
T ss_pred cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----------HHHHHHHHHHHHHhccHHHHHHHhhhcch
Confidence 36899999999999999999999999999999999742 48999999999999999999999998864
No 15
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=1.4e-19 Score=170.82 Aligned_cols=70 Identities=44% Similarity=0.670 Sum_probs=65.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+||++||||++++ .+.++++|+.|++||+||+||.+|+.||.+|..
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~------~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~ 72 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPD------NPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHA 72 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCC------ChHHHHHHHHHHHHHHHhcchhhhhhhhhcccc
Confidence 4799999999999999999999999999999999875 356889999999999999999999999998864
No 16
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=1.4e-18 Score=158.17 Aligned_cols=72 Identities=39% Similarity=0.616 Sum_probs=67.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP 152 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 152 (268)
..|||+||||+.+++..+|++|||..+++||||||++ ++.|.+.|+.|.+||+||+||..|..||..+....
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~------dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~ 75 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPG------DPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGS 75 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCC------ChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcc
Confidence 6899999999999999999999999999999999998 46699999999999999999999999999987643
No 17
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=1.9e-19 Score=170.26 Aligned_cols=68 Identities=43% Similarity=0.661 Sum_probs=63.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
.|||+||||+++|+.++||+|||+||++||||+++. +.++++|+.|++||+||+||.+|+.||.+|..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~ 70 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD-------EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP 70 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc-------HHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence 699999999999999999999999999999999863 45889999999999999999999999998854
No 18
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=2.2e-19 Score=169.71 Aligned_cols=99 Identities=36% Similarity=0.479 Sum_probs=75.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCCc
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK 154 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 154 (268)
..|||+||||+++|+.++||+|||+||++||||+++. +.+.++|+.|++||+||+||.+|+.||.+|......
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~ 76 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-------PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDN 76 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-------hhHHHHHHHHHHHHHHhcchHhhhhhhhcCcccccc
Confidence 5799999999999999999999999999999999863 347899999999999999999999999988642211
Q ss_pred chHHHHHHHHHhhhccccchHHHHHHHhh
Q 024429 155 ASQAWMEWLIKKRKAFDQRGDMAIAAWAE 183 (268)
Q Consensus 155 ~~~~~~~~~~~~~~~f~~~~~~f~~~~~~ 183 (268)
.... ...|. ...|++++++|..||++
T Consensus 77 ~~~~-~~~~~--~~~~~~~~d~f~~~Fgg 102 (377)
T PRK14298 77 QYSA-EDIFR--GADFGGFGDIFEMFFGG 102 (377)
T ss_pred ccCc-ccccc--cCCcCcchhhhHhhhcC
Confidence 0000 00000 01244566778888764
No 19
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=1.7e-19 Score=171.25 Aligned_cols=69 Identities=41% Similarity=0.660 Sum_probs=64.5
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (268)
..|||+||||+++|+.++||+|||+||++||||++++ .+.+.++|+.|++||+||+||++|+.||.+|.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~------~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPG------DPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC------ChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 4799999999999999999999999999999999875 35689999999999999999999999999864
No 20
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=2.3e-18 Score=149.57 Aligned_cols=87 Identities=37% Similarity=0.636 Sum_probs=74.2
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCC
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (268)
...|+|+||||.++|+..+|++||++|+++||||+++. +...++++.|+.|+.||+||+|.++|+.||..|..+..
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~e----ed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~ 87 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHE----EDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDE 87 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchh----hhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCc
Confidence 35699999999999999999999999999999999962 23678999999999999999999999999999987643
Q ss_pred cc--hHHHHHHHH
Q 024429 154 KA--SQAWMEWLI 164 (268)
Q Consensus 154 ~~--~~~~~~~~~ 164 (268)
.+ ..+|.+||.
T Consensus 88 ~~d~~~~~~e~~~ 100 (264)
T KOG0719|consen 88 SGDIDEDWLEFWR 100 (264)
T ss_pred cchhhhHHHHHHH
Confidence 32 345555554
No 21
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=2e-19 Score=170.23 Aligned_cols=70 Identities=43% Similarity=0.693 Sum_probs=65.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+|+++||||+++. .+.++++|+.|++||+||+||.+|+.||.+|..
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~------~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~ 72 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKG------NKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTA 72 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC------cHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcc
Confidence 4799999999999999999999999999999999875 356899999999999999999999999998865
No 22
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=3.4e-19 Score=169.26 Aligned_cols=69 Identities=39% Similarity=0.629 Sum_probs=64.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
.|||+||||+++|+.++||+|||+||++||||++++ .+.+.++|+.|++||+||+||.+|+.||.++..
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~------~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 69 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPG------DAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD 69 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC------chHHHHHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence 489999999999999999999999999999999975 356899999999999999999999999998864
No 23
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.77 E-value=7.2e-18 Score=170.47 Aligned_cols=72 Identities=28% Similarity=0.399 Sum_probs=66.2
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 024429 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (268)
Q Consensus 73 ~~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (268)
....+||+||||+++|+..+||+|||+||++||||++++ ..+..+|+.|++||+|||||.+|+.||.+|..+
T Consensus 570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~-------~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~G 641 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSG-------NEGFHKFKKINEAYQILGDIDKKKMYNKFGYDG 641 (1136)
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------chHHHHHHHHHHHHHHhCCHHHHHHHhhccccc
Confidence 456899999999999999999999999999999999875 247889999999999999999999999998764
No 24
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=5.1e-19 Score=167.54 Aligned_cols=69 Identities=46% Similarity=0.727 Sum_probs=64.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+|+++||||++++ +.+.++|+.|++||+||+||.+|+.||.++..
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~ 70 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-------PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHA 70 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------ccHHHHHHHHHHHHHHhcCHHHHHHHhhhccc
Confidence 4799999999999999999999999999999999864 35789999999999999999999999998864
No 25
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.76 E-value=9.4e-19 Score=166.50 Aligned_cols=69 Identities=41% Similarity=0.706 Sum_probs=64.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
.|||+||||+++|+.++||+|||+|+++||||++++ ...+++.|+.|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~------~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~ 71 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPD------NKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHA 71 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCC------chHHHHHHHHHHHHHHHhhhhhhhhhhhhccch
Confidence 699999999999999999999999999999999875 346889999999999999999999999998764
No 26
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.76 E-value=1.3e-18 Score=164.55 Aligned_cols=69 Identities=42% Similarity=0.729 Sum_probs=64.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+|+++||||+++. +.++++|+.|++||+||+||.+|+.||.+|..
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~ 71 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-------EGADEKFKEISEAYEVLSDDQKRAQYDQFGHA 71 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhccHhHHHHHHhcCcc
Confidence 4799999999999999999999999999999999864 34889999999999999999999999998865
No 27
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.76 E-value=8.2e-19 Score=165.56 Aligned_cols=70 Identities=44% Similarity=0.720 Sum_probs=64.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+|+++||||++++ .+.+.+.|+.|++||+||+||.+|+.||.++..
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~------~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 72 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG------DKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHA 72 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC------cHHHHHHHHHHHHHHHHhcchhhhhHhhhcccc
Confidence 4799999999999999999999999999999999875 345889999999999999999999999998764
No 28
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=1.8e-18 Score=164.06 Aligned_cols=70 Identities=51% Similarity=0.788 Sum_probs=64.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.++||+|||+||++||||++++ .+.++++|+.|++||+||+||.+|+.||.+|..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~------~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~ 73 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPG------DKEAEQKFKEINEAYEILSDPQKRAQYDQFGHA 73 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCC------chHHHHHHHHHHHHHHHhCCHHHHHHHHhhccc
Confidence 4799999999999999999999999999999999875 356889999999999999999999999998754
No 29
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.75 E-value=1.6e-18 Score=123.40 Aligned_cols=64 Identities=58% Similarity=0.926 Sum_probs=59.7
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhc
Q 024429 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYD 145 (268)
Q Consensus 77 d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD 145 (268)
|||+||||+++++.++||++|+++++++|||++++. ...+.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~-----~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGD-----EAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTST-----HHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhh-----hhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 589999999999999999999999999999998763 1468899999999999999999999998
No 30
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.4e-18 Score=154.09 Aligned_cols=70 Identities=37% Similarity=0.591 Sum_probs=66.0
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..++|+||||+++|+.++|||+||+|+++||||++++ .+++.++|+.||+||+||+||.+|..||.+|..
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd------~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~ 99 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGD------NPEATDKFKEINTAYAILSDPTKRNVYDEYGEL 99 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCC------CchhHHHHHHHHHHHHHhcChhhhhhHHHhhhH
Confidence 6899999999999999999999999999999999987 467999999999999999999999999998654
No 31
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=2.4e-18 Score=162.73 Aligned_cols=69 Identities=46% Similarity=0.785 Sum_probs=64.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.+|||+|||+||++||||+++. +.++++|+.|++||+||+||.+|+.||.+|..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~ 72 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-------EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHA 72 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhchhHHHHHHhhhccc
Confidence 5799999999999999999999999999999999863 35899999999999999999999999998754
No 32
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=2.5e-18 Score=161.99 Aligned_cols=70 Identities=47% Similarity=0.749 Sum_probs=64.7
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
.|||+||||+++|+.++||+|||+|+++||||+++.. ...+.++|+.|++||+||+||.+|+.||.+|..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~ 72 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGN-----KAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTV 72 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-----hhHHHHHHHHHHHHHHHhcChhhhhhhcccCCc
Confidence 6999999999999999999999999999999998652 336899999999999999999999999998865
No 33
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.74 E-value=1.7e-18 Score=162.47 Aligned_cols=67 Identities=51% Similarity=0.744 Sum_probs=62.4
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 77 d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
|||+||||+++|+.++||+|||+|+++||||+++. +.+.++|+.|++||+||+||.+|+.||.++..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~ 67 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-------KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHA 67 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------ccHHHHHHHHHHHHHHhhChHHHHhhhhcccc
Confidence 79999999999999999999999999999999862 34789999999999999999999999998765
No 34
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=3.3e-18 Score=156.54 Aligned_cols=69 Identities=41% Similarity=0.660 Sum_probs=64.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++||.++||+|||+|+++||||+++. +.+.++|+.|++||+||+||.+|+.||.++..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~ 71 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS-------PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT 71 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence 4799999999999999999999999999999999863 35789999999999999999999999998764
No 35
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=3.3e-18 Score=162.31 Aligned_cols=70 Identities=44% Similarity=0.732 Sum_probs=64.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcc----cCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM----DNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~----~~~~ 150 (268)
..|||+||||+++|+.++||+|||+|+++||||+++. .+.++++|+.|++||+||+||.+|+.||. +|..
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~------~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~ 81 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKG------DAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNG 81 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCC------chhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccc
Confidence 4799999999999999999999999999999999875 34689999999999999999999999998 6643
No 36
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=1.8e-17 Score=156.61 Aligned_cols=68 Identities=47% Similarity=0.727 Sum_probs=63.4
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
.|||+||||+++|+.++||+|||+|+++||||+++. +.++++|+.|++||+||+||.+|+.||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~ 70 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-------PGAEDRFKEINRAYEVLSDPETRARYDQFGEA 70 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------cCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence 699999999999999999999999999999999864 34789999999999999999999999998864
No 37
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.70 E-value=1.2e-17 Score=157.13 Aligned_cols=76 Identities=42% Similarity=0.667 Sum_probs=69.5
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP 152 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 152 (268)
++.+||.+|||+++||.+|||+|||++++.|||||..++ .++..|++.|+.|..||||||||++|+.||.+|..+.
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dp---d~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL 82 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDP---DQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGL 82 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCCh---hHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccc
Confidence 456999999999999999999999999999999998753 3478899999999999999999999999999987744
No 38
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=2.6e-17 Score=156.15 Aligned_cols=70 Identities=37% Similarity=0.616 Sum_probs=65.1
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
..|||+||||+++|+.+|||+|||+|+++||||++++ .+.+.++|+.|++||+||+||.+|+.||.++..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~------~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~ 73 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPG------DKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA 73 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC------ChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence 5799999999999999999999999999999999975 356899999999999999999999999998754
No 39
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=3.2e-17 Score=149.67 Aligned_cols=70 Identities=43% Similarity=0.690 Sum_probs=65.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (268)
..|||+||||+++|+..|||+||++|+++||||.+.. ..+.++|+.|.+||+||+|+++|..||..+...
T Consensus 42 ~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-------~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 42 KEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-------KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred CcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-------cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 3499999999999999999999999999999999986 369999999999999999999999999988753
No 40
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=3.6e-17 Score=154.47 Aligned_cols=68 Identities=41% Similarity=0.654 Sum_probs=63.2
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
.|||+||||+++||.++||+|||+|+++||||+++. ..++++|+.|++||+||+||.+|+.||.+|..
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~ 70 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-------KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD 70 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------cCHHHHHHHHHHHHHHhhhHhHhhHHHhcccc
Confidence 699999999999999999999999999999999863 34788999999999999999999999998754
No 41
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.68 E-value=4.8e-17 Score=149.92 Aligned_cols=68 Identities=43% Similarity=0.644 Sum_probs=62.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (268)
..|||+||||+++|+.++||+|||+|+++||||+++. +.+.+.|+.|++||+||+||.+|+.||.++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~-------~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~ 70 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-------PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ 70 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence 3699999999999999999999999999999999753 3589999999999999999999999998763
No 42
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=6.2e-17 Score=152.83 Aligned_cols=68 Identities=41% Similarity=0.617 Sum_probs=63.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
.|||+||||+++|+.++||+|||+|+++||||+++. ..+.++|+.|++||+||+||.+|+.||.+|..
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~-------~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~ 69 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE-------KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA 69 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCc
Confidence 589999999999999999999999999999999863 35889999999999999999999999998865
No 43
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.65 E-value=2.1e-16 Score=110.74 Aligned_cols=59 Identities=51% Similarity=0.720 Sum_probs=54.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChh
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEE 139 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~ 139 (268)
.+||+||||+++++.++||++|+++++++|||++++. .+.+.+.|..|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~-----~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD-----KEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-----hHHHHHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999999999999998753 3568999999999999999985
No 44
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=5e-16 Score=133.86 Aligned_cols=75 Identities=36% Similarity=0.532 Sum_probs=67.9
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCC
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (268)
..-|+|+||||+++++..|||+|||+|+++|||||++.. ...++.|..|++||+.|+|+..|..|..+|..+..
T Consensus 97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~------~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDGp 170 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE------EGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDGP 170 (230)
T ss_pred hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc------chhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCCc
Confidence 467999999999999999999999999999999999762 45788999999999999999999999999977553
Q ss_pred c
Q 024429 154 K 154 (268)
Q Consensus 154 ~ 154 (268)
+
T Consensus 171 q 171 (230)
T KOG0721|consen 171 Q 171 (230)
T ss_pred c
Confidence 3
No 45
>PHA03102 Small T antigen; Reviewed
Probab=99.63 E-value=4.4e-16 Score=129.37 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=63.1
Q ss_pred CCCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 024429 75 EKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP 152 (268)
Q Consensus 75 ~~d~Y~iLgl~~~a--s~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 152 (268)
...+|+||||+++| |..+||+|||++++++|||++++ .+.|+.|++||++|+|+.+|..||.+|....
T Consensus 4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----------~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~ 73 (153)
T PHA03102 4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----------EEKMKELNTLYKKFRESVKSLRDLDGEEDSS 73 (153)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----------hHHHHHHHHHHHHHhhHHHhccccccCCccc
Confidence 35689999999999 99999999999999999999643 5799999999999999999999999987654
Q ss_pred Ccc
Q 024429 153 MKA 155 (268)
Q Consensus 153 ~~~ 155 (268)
...
T Consensus 74 ~~~ 76 (153)
T PHA03102 74 SEE 76 (153)
T ss_pred ccc
Confidence 443
No 46
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.62 E-value=7.6e-16 Score=105.96 Aligned_cols=55 Identities=47% Similarity=0.697 Sum_probs=51.2
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCC
Q 024429 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137 (268)
Q Consensus 77 d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsd 137 (268)
|||+||||+++++.++||++|+++++++|||++++ .+.+.+.|..|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~------~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPD------DPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC------cHHHHHHHHHHHHHHHHhcC
Confidence 69999999999999999999999999999999875 15689999999999999987
No 47
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.57 E-value=5.9e-15 Score=146.68 Aligned_cols=69 Identities=39% Similarity=0.638 Sum_probs=63.6
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN 151 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 151 (268)
.|||+||||+++|+..+||+|||+|+++||||+++. +.+...|+.|++||++|+||.+|+.||.++..+
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-------~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG 70 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-------PDAASIFAEINEANDVLSNPKKRANYDKYGHDG 70 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence 699999999999999999999999999999999864 357889999999999999999999999987643
No 48
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=4.6e-15 Score=127.10 Aligned_cols=68 Identities=49% Similarity=0.664 Sum_probs=63.5
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccc-hHHHHHHHHHHHHHHcCChhHHHhhccc
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGE-TAEAKFIKIQAAYELLIDEERRRQYDMD 147 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~-~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 147 (268)
...+||+||||+++|+..+|++|||+++++||||+++.. + .+.+.|+.|++||+||+|+..|..||..
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~------~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGD------PKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------hhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 467999999999999999999999999999999999863 3 4889999999999999999999999985
No 49
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.53 E-value=1.8e-13 Score=116.71 Aligned_cols=74 Identities=22% Similarity=0.299 Sum_probs=62.2
Q ss_pred CCCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 024429 74 DEKSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~--as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (268)
...|||+||||++. ++..+|+++|+++++++|||++.+. +..+...+.+.+..||+||+||+||.+|+.|+...
T Consensus 4 ~~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~-~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l 79 (176)
T PRK03578 4 LKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAA-GDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHL 79 (176)
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-CHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHh
Confidence 35899999999995 6899999999999999999998753 22223446677899999999999999999999643
No 50
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.53 E-value=1.3e-14 Score=123.17 Aligned_cols=73 Identities=19% Similarity=0.313 Sum_probs=62.1
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 024429 76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (268)
Q Consensus 76 ~d~Y~iLgl~~~--as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (268)
.|||+||||++. ++..+|+++|+++++++|||+..+.+ +.+...+.+.|..|++||+||+||.+|+.|+....
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~-~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~ 75 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANAS-ERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLH 75 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCc-HHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhc
Confidence 489999999996 68899999999999999999987532 22344578899999999999999999999996443
No 51
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.51 E-value=2.7e-13 Score=114.56 Aligned_cols=71 Identities=21% Similarity=0.294 Sum_probs=60.7
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 024429 76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (268)
Q Consensus 76 ~d~Y~iLgl~~~--as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (268)
.|||+||||++. ++..+|+++|+++++++|||++.+. .+...+.+.+..|++||+||+||.+|+.|+....
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~---~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~ 74 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTL---QEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ 74 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCH---HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence 589999999996 7899999999999999999998641 2234455678999999999999999999987654
No 52
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.48 E-value=9.8e-15 Score=134.05 Aligned_cols=75 Identities=40% Similarity=0.655 Sum_probs=67.7
Q ss_pred CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 024429 72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (268)
Q Consensus 72 ~~~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (268)
....+|||.||||.++|+..||-+|||++|.+||||-..+ .+++..|+.+|.-|..|-+||+||++|+.||..-+
T Consensus 390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqd---EeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeD 464 (504)
T KOG0624|consen 390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQD---EEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGED 464 (504)
T ss_pred HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccC---HHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCC
Confidence 3457999999999999999999999999999999999865 34467899999999999999999999999998643
No 53
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.48 E-value=6.6e-14 Score=118.97 Aligned_cols=75 Identities=23% Similarity=0.368 Sum_probs=64.2
Q ss_pred CCCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 024429 74 DEKSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~--as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (268)
...+||++|||++. .+..+|+++||++++++|||++.+. +..+...+.+.|..||+||+||+||.+|+.|+....
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~-~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~ 78 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADA-PEREQRLALERSASLNEAYQTLKSPPRRARYLLALS 78 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-cHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 46899999999996 6789999999999999999998653 223345678899999999999999999999997543
No 54
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=7.8e-14 Score=130.40 Aligned_cols=77 Identities=35% Similarity=0.569 Sum_probs=69.2
Q ss_pred CCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 71 NWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 71 ~~~~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
......|||.||||.++++..+||+|||++++.||||++.++ ..+++.+|+.|.+||.||+||.+|..||+.-..
T Consensus 368 kkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ags-----q~eaE~kFkevgeAy~il~d~~kr~r~dsg~dl 442 (486)
T KOG0550|consen 368 KKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGS-----QKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDL 442 (486)
T ss_pred HHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcch-----hHHHHHHHHHHHHHHHHhcCHHHHhhcccccch
Confidence 345678999999999999999999999999999999999875 578999999999999999999999999996544
Q ss_pred CC
Q 024429 151 NP 152 (268)
Q Consensus 151 ~~ 152 (268)
.+
T Consensus 443 e~ 444 (486)
T KOG0550|consen 443 EE 444 (486)
T ss_pred hh
Confidence 33
No 55
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.41 E-value=2e-13 Score=128.82 Aligned_cols=70 Identities=31% Similarity=0.524 Sum_probs=64.9
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
...|+|.||||+.++++++||+.||++|...|||||.. +.|++.|+.|+.||++|+|+.+|..||.....
T Consensus 233 ~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~-------~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~k 302 (490)
T KOG0720|consen 233 NILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI-------PRAEEAFKKLQVAFEVIGDSVKRKEYDLELKK 302 (490)
T ss_pred cCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC-------hhHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 37899999999999999999999999999999999973 67999999999999999999999999985543
No 56
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=3.4e-13 Score=118.86 Aligned_cols=75 Identities=35% Similarity=0.562 Sum_probs=67.4
Q ss_pred hcCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 024429 69 AANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN 148 (268)
Q Consensus 69 ~~~~~~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 148 (268)
....+...|.|+||||.++++..+|.+|||+|+++||||+++++ +..+.|..|..||++|.|...|..||-..
T Consensus 26 egLYCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~-------e~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 26 EGLYCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDP-------ESKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred hhhcccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCc-------hhhhhhhhhhcccccccchhhHHhHHHHh
Confidence 34568899999999999999999999999999999999999863 45699999999999999999999999765
Q ss_pred CC
Q 024429 149 RV 150 (268)
Q Consensus 149 ~~ 150 (268)
..
T Consensus 99 dh 100 (329)
T KOG0722|consen 99 DH 100 (329)
T ss_pred cC
Confidence 43
No 57
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.36 E-value=7.1e-13 Score=120.02 Aligned_cols=65 Identities=37% Similarity=0.507 Sum_probs=57.2
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCc-cccchHHHHHHHHHHHHHHcCC
Q 024429 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTL-EKGETAEAKFIKIQAAYELLID 137 (268)
Q Consensus 73 ~~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~-~~~~~a~~~f~~I~~AY~vLsd 137 (268)
....++|+||||++++|.++||++||+|+++||||++.+.+.+ +..+.++++|+.|++||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 3458999999999999999999999999999999998766543 3356799999999999999974
No 58
>PHA02624 large T antigen; Provisional
Probab=99.33 E-value=1.9e-12 Score=127.35 Aligned_cols=85 Identities=22% Similarity=0.375 Sum_probs=68.8
Q ss_pred CCCCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhh--cccC-
Q 024429 74 DEKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQY--DMDN- 148 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~a--s~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~Y--D~~~- 148 (268)
...++|+||||+++| +..+||+|||+++++||||+.+ +.+.|+.|++||++|+|+.+|..| |.+.
T Consensus 9 e~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG----------deekfk~Ln~AYevL~d~~k~~r~~fd~~~~ 78 (647)
T PHA02624 9 ESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG----------DEEKMKRLNSLYKKLQEGVKSARQSFGTQDS 78 (647)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC----------cHHHHHHHHHHHHHHhcHHHhhhcccccccc
Confidence 457899999999999 9999999999999999999953 268999999999999999999999 5431
Q ss_pred CCCCCcchHHHHHHHHHhhh
Q 024429 149 RVNPMKASQAWMEWLIKKRK 168 (268)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~ 168 (268)
...+..+...|..|+..+.+
T Consensus 79 ~~v~~~~~~~w~~ww~~f~~ 98 (647)
T PHA02624 79 SEIPTYGTPEWEQWWEEFNE 98 (647)
T ss_pred cCCCCCccccHHHHHHHhhh
Confidence 12233456677777774443
No 59
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=1.2e-12 Score=117.22 Aligned_cols=70 Identities=47% Similarity=0.673 Sum_probs=62.9
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (268)
..|||.||||.++|+..+|++||++++++||||+++.. ...+..+|++|.+||+||+||.+|..||.++.
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~-----~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~ 71 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSP-----KEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE 71 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCc-----hhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence 47899999999999999999999999999999997653 23455689999999999999999999999986
No 60
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.30 E-value=3e-12 Score=101.53 Aligned_cols=52 Identities=27% Similarity=0.372 Sum_probs=47.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcC
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLI 136 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLs 136 (268)
..++|+||||++++|.++|+++||+|++++|||+.+ ..+.|..|++||++|.
T Consensus 64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG----------s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG----------STYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC----------CHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999999853 2578999999999995
No 61
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.21 E-value=1.2e-11 Score=116.69 Aligned_cols=79 Identities=33% Similarity=0.448 Sum_probs=71.2
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCC
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM 153 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 153 (268)
..-|+|+||||+.+++..+||++||+|+.++||||.+. -.++...+.++.++.|++||..|+|...|..|=.+|..+..
T Consensus 96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~-mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p 174 (610)
T COG5407 96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPP-MVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP 174 (610)
T ss_pred cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCC-CChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence 35799999999999999999999999999999999886 45556788999999999999999999999999999876543
No 62
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.21 E-value=2.5e-11 Score=103.18 Aligned_cols=73 Identities=22% Similarity=0.324 Sum_probs=63.4
Q ss_pred CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 024429 76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (268)
Q Consensus 76 ~d~Y~iLgl~~~--as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (268)
.|||++|||++. .+...+++.|+.|.+++|||+..+. ++.++..+.+.-..||+||.||+||.+|+.|=....
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~-~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANS-SAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCC-CHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 589999999995 8999999999999999999998764 344456678889999999999999999999976443
No 63
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=1.2e-09 Score=93.54 Aligned_cols=68 Identities=29% Similarity=0.516 Sum_probs=62.0
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhc
Q 024429 73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYD 145 (268)
Q Consensus 73 ~~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD 145 (268)
--+-++|+||.|.|..+.++||+.||+|++..|||+|+.+ .+.|...|..|.+||.+|-|+..|..-+
T Consensus 50 yfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd-----~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 50 YFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDD-----AERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred ccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCccc-----HHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 3578999999999999999999999999999999999985 5789999999999999999999776544
No 64
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.09 E-value=2.6e-09 Score=89.61 Aligned_cols=61 Identities=23% Similarity=0.410 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 024429 88 ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (268)
Q Consensus 88 as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (268)
.+..+|+++|+++++++|||+.++.+ ..+...+.+.|..|++||+||+||.+|+.|+....
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~-~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGS-AQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCC-hhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 47789999999999999999986542 22345678999999999999999999999998654
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.20 E-value=1.9e-06 Score=88.69 Aligned_cols=58 Identities=29% Similarity=0.423 Sum_probs=49.3
Q ss_pred CCCCCCccccccCCCC----CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCCh
Q 024429 72 WADEKSPYETLELERD----ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138 (268)
Q Consensus 72 ~~~~~d~Y~iLgl~~~----as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp 138 (268)
.....+.|+||.|+-+ ...+.||++|++|+.+|||||||. .-++|..+++||+.|+..
T Consensus 1277 ~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE---------GRemFe~VnKAYE~L~~~ 1338 (2235)
T KOG1789|consen 1277 TMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE---------GREMFERVNKAYELLSSE 1338 (2235)
T ss_pred ccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch---------HHHHHHHHHHHHHHHHHH
Confidence 3456789999999863 345889999999999999999975 589999999999999843
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.17 E-value=1.4e-06 Score=76.46 Aligned_cols=74 Identities=27% Similarity=0.438 Sum_probs=56.8
Q ss_pred hhhhhhHHHhhhcCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHH-HcC
Q 024429 58 FRVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYE-LLI 136 (268)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~-vLs 136 (268)
++....++.+.-.+...-..+|.||||..+|+.++++.+|..|++++|||.... +...+.|.+|.+||. ||+
T Consensus 29 fgiirnrll~~~kske~~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-------~adaa~f~qideafrkvlq 101 (342)
T KOG0568|consen 29 FGIIRNRLLHLHKSKEKIMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-------EADAARFIQIDEAFRKVLQ 101 (342)
T ss_pred hhhHHHHHHHHhhhHHHHHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-------cccHHHHHHHHHHHHHHHH
Confidence 333333444433222334689999999999999999999999999999999753 446789999999998 877
Q ss_pred Ch
Q 024429 137 DE 138 (268)
Q Consensus 137 dp 138 (268)
..
T Consensus 102 ~~ 103 (342)
T KOG0568|consen 102 EK 103 (342)
T ss_pred HH
Confidence 43
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.85 E-value=3.2e-05 Score=60.07 Aligned_cols=53 Identities=28% Similarity=0.265 Sum_probs=45.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCCh
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp 138 (268)
...-.||||.++++.+.||.|+|+..+..|||+...+ -.-..|++|+++|...
T Consensus 56 ~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP----------YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 56 REAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP----------YLASKINEAKDLLEGT 108 (112)
T ss_pred HHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH----------HHHHHHHHHHHHHhcc
Confidence 3445799999999999999999999999999998653 4556899999999753
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.56 E-value=9.8e-05 Score=61.23 Aligned_cols=74 Identities=20% Similarity=0.297 Sum_probs=58.5
Q ss_pred CCCCCccccccCCC--CCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhccc
Q 024429 73 ADEKSPYETLELER--DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMD 147 (268)
Q Consensus 73 ~~~~d~Y~iLgl~~--~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 147 (268)
....+||.++|... ...+.-++--|.-..+++|||+...+... +...+.+....|++||.+|.||-.|+.|=..
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~-~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk 80 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAG-DTDQASEQSAELNKAYDTLKDPLARARYLLK 80 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccc-cchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45789999998665 45666677689999999999996543211 1346888999999999999999999999764
No 69
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.11 E-value=0.00026 Score=60.23 Aligned_cols=62 Identities=35% Similarity=0.477 Sum_probs=53.9
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccc-cchHHHHHHHHHHHHHHc
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEK-GETAEAKFIKIQAAYELL 135 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~-~~~a~~~f~~I~~AY~vL 135 (268)
...+.|.+||+...++..+|+++|+++...+|||+..+.+.+.+ ...+.+.++.|++||+.+
T Consensus 111 ~~~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 111 DREDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred cchhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 34799999999999999999999999999999999877665443 567889999999999854
No 70
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.87 E-value=0.00093 Score=65.00 Aligned_cols=53 Identities=30% Similarity=0.406 Sum_probs=41.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCCC-ccccchHHHHHHHHHHHHHHcC
Q 024429 84 LERDADEEQIKVAYRRLAKFYHPDVYDGRGT-LEKGETAEAKFIKIQAAYELLI 136 (268)
Q Consensus 84 l~~~as~~eIKkaYrkla~~~HPDk~~~~~~-~~~~~~a~~~f~~I~~AY~vLs 136 (268)
|..-.+.++||++|||.+|..||||.+..|. ...+=.+++.|-.+++||....
T Consensus 396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~ 449 (453)
T KOG0431|consen 396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFN 449 (453)
T ss_pred hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh
Confidence 3334689999999999999999999988752 2224467888888888887654
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.16 E-value=0.0031 Score=53.65 Aligned_cols=72 Identities=25% Similarity=0.397 Sum_probs=54.2
Q ss_pred CccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 024429 77 SPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR 149 (268)
Q Consensus 77 d~Y~iLgl~~~a--s~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 149 (268)
++..++|+++.+ ..+.++..|+.+.+.+|||+....+ ..+...+.+.+..++.||.+|.||-.|..|=....
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~-~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~ 75 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKAS-EAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA 75 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccc-hHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence 345556666544 4567899999999999999987642 11233466789999999999999999999976443
No 72
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=95.05 E-value=0.01 Score=55.31 Aligned_cols=62 Identities=31% Similarity=0.364 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 024429 87 DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV 150 (268)
Q Consensus 87 ~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 150 (268)
.++..+|..+|+..++.+||++.... ........+.|++|.+||.||++...|..+|.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~~~ 64 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFY--EKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWDKF 64 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHH--HHhhhhHHHHHHHHHHHHHHHhccccccchhhhhHH
Confidence 35778899999999999999997410 000124578899999999999997777788877643
No 73
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=93.54 E-value=0.14 Score=41.44 Aligned_cols=56 Identities=21% Similarity=0.166 Sum_probs=40.0
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChh
Q 024429 74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEE 139 (268)
Q Consensus 74 ~~~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~ 139 (268)
.......||||++..+.++|.+.|.+|-...+|++.+. --.-..|..|.+.|....
T Consensus 56 tl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----------fYLQSKV~rAKErl~~El 111 (127)
T PF03656_consen 56 TLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----------FYLQSKVFRAKERLEQEL 111 (127)
T ss_dssp -HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----------HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----------HHHHHHHHHHHHHHHHHH
Confidence 34567799999999999999999999999999998643 344557888888887544
No 74
>PF13446 RPT: A repeated domain in UCH-protein
Probab=81.96 E-value=2.7 Score=29.21 Aligned_cols=28 Identities=25% Similarity=0.489 Sum_probs=25.4
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHHH
Q 024429 75 EKSPYETLELERDADEEQIKVAYRRLAK 102 (268)
Q Consensus 75 ~~d~Y~iLgl~~~as~~eIKkaYrkla~ 102 (268)
..+.|++|||+++.+.+.|-.+|.....
T Consensus 4 ~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 4 VEEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 3567999999999999999999999887
No 75
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=81.51 E-value=2.6 Score=33.33 Aligned_cols=53 Identities=17% Similarity=0.289 Sum_probs=42.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhH
Q 024429 86 RDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEER 140 (268)
Q Consensus 86 ~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~ 140 (268)
+..+..+++.|.|.+-++.|||.... .|.+....++-++.|+.-.+.|..+..
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~--~P~~k~~Ne~SLk~Ln~~Ld~l~~~~~ 56 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQ--HPEEKQVNEESLKLLNSYLDSLKKRKS 56 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCccccc--ChHHHHhhHHHHHHHHHHHHHHhccCC
Confidence 34567889999999999999998765 344567778889999988888887553
No 76
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=69.73 E-value=8.5 Score=33.38 Aligned_cols=39 Identities=36% Similarity=0.429 Sum_probs=30.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCC
Q 024429 85 ERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137 (268)
Q Consensus 85 ~~~as~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsd 137 (268)
+++|+.+||..|+.++..+|--| ...-..|..||+.+.-
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd--------------~~~~~~IEaAYD~ILM 39 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD--------------EKSREAIEAAYDAILM 39 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHHHH
Confidence 47899999999999999999222 4556679999987653
No 77
>PF10252 PP28: Casein kinase substrate phosphoprotein PP28; InterPro: IPR019380 This domain is a region of 70 residues conserved in proteins from plants to humans and contains a serine/arginine rich motif. In rats the full protein is a casein kinase substrate, and this region contains phosphorylation sites for both cAMP-dependent protein kinase and casein kinase II [].
Probab=44.23 E-value=97 Score=23.19 Aligned_cols=52 Identities=8% Similarity=0.093 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHH
Q 024429 202 DPEEERKILAREMKASK----EYFTNTMKRHTLVLKKRDLMRRKAEEEKRKAIGRL 253 (268)
Q Consensus 202 ~~r~erR~~ekenk~~r----ke~~~~ir~lv~~~~krD~~~~~~ee~~~k~~~~~ 253 (268)
.+|.+|-.|+++..+.| .+.-.|-..-+|+++--=|....+++..++...+.
T Consensus 25 lSRRERE~iekq~A~erY~klh~~GKT~eakaDLaRLAlIRkqREeaA~kR~aek~ 80 (82)
T PF10252_consen 25 LSRREREEIEKQRARERYMKLHAEGKTDEAKADLARLALIRKQREEAAAKREAEKE 80 (82)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68999999999877776 33334555556666655566666666555554443
No 78
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=43.55 E-value=80 Score=33.22 Aligned_cols=31 Identities=32% Similarity=0.451 Sum_probs=19.9
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHHHHHHhccc
Q 024429 230 LVLKKRDLMRRKAEEEKRKAIGRLLAAEGLE 260 (268)
Q Consensus 230 ~~~~krD~~~~~~ee~~~k~~~~~~~~~~~~ 260 (268)
.+-+.|.|.+.++||.++.+.++-|+.+-||
T Consensus 376 qLerQReiE~qrEEerkkeie~rEaar~ElE 406 (1118)
T KOG1029|consen 376 QLERQREIERQREEERKKEIERREAAREELE 406 (1118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566888888777777666666555443
No 79
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=42.49 E-value=81 Score=23.22 Aligned_cols=35 Identities=9% Similarity=0.079 Sum_probs=27.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYD 110 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~ 110 (268)
++.-+++|+++.|+..||+.|-++.++++.--..+
T Consensus 3 RNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~P 37 (88)
T COG5552 3 RNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHP 37 (88)
T ss_pred cchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCc
Confidence 45557899999999999999988888877444433
No 80
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=40.52 E-value=19 Score=17.67 Aligned_cols=13 Identities=54% Similarity=0.754 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHcC
Q 024429 124 KFIKIQAAYELLI 136 (268)
Q Consensus 124 ~f~~I~~AY~vLs 136 (268)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4777888888774
No 81
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=30.28 E-value=1.7e+02 Score=21.58 Aligned_cols=34 Identities=15% Similarity=0.017 Sum_probs=26.9
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 024429 77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYD 110 (268)
Q Consensus 77 d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~ 110 (268)
+--.+.|+.|.+|.+||..|-.+.++|..--..+
T Consensus 4 nI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~P 37 (78)
T PF10041_consen 4 NIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKP 37 (78)
T ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCc
Confidence 3445678999999999999999999887554444
No 82
>KOG2689 consensus Predicted ubiquitin regulatory protein [Posttranslational modification, protein turnover, chaperones]
Probab=27.79 E-value=2.3e+02 Score=26.13 Aligned_cols=28 Identities=21% Similarity=0.205 Sum_probs=20.5
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHhhhh
Q 024429 210 LAREMKASK--EYFTNTMKRHTLVLKKRDL 237 (268)
Q Consensus 210 ~ekenk~~r--ke~~~~ir~lv~~~~krD~ 237 (268)
.++++...+ ++....+++|-+...++++
T Consensus 116 ~~~~k~~~ks~~~~~~a~~r~q~~e~~~~~ 145 (290)
T KOG2689|consen 116 LEREKQRRKSGDEMSAAKRRLQDDEMRRAA 145 (290)
T ss_pred hhhHHhhhhcccHHHHHHHHHHHHHHHHHH
Confidence 334444444 8888899999999999983
No 83
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.59 E-value=83 Score=25.44 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=30.1
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 024429 76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDG 111 (268)
Q Consensus 76 ~d~Y~iLgl~~~as~~eIKkaYrkla~~~HPDk~~~ 111 (268)
+..-.||+|++..+.++|-+.|-.|-....+.+.+.
T Consensus 59 qEa~qILnV~~~ln~eei~k~yehLFevNdkskGGS 94 (132)
T KOG3442|consen 59 QEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGS 94 (132)
T ss_pred HHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCcc
Confidence 445689999999999999999999999886666543
No 84
>PRK11508 sulfur transfer protein TusE; Provisional
Probab=24.47 E-value=47 Score=26.18 Aligned_cols=18 Identities=17% Similarity=0.267 Sum_probs=15.2
Q ss_pred HHHHHHHHHHhccccCCc
Q 024429 247 RKAIGRLLAAEGLELDTD 264 (268)
Q Consensus 247 ~k~~~~~~~~~~~~~~~~ 264 (268)
+..++..|++|||+|.|+
T Consensus 25 e~vA~~lA~~egieLT~~ 42 (109)
T PRK11508 25 EPLAVVIAENEGISLSPE 42 (109)
T ss_pred HHHHHHHHHHhCCCCCHH
Confidence 567888999999999875
No 85
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=23.62 E-value=2.2e+02 Score=18.74 Aligned_cols=42 Identities=14% Similarity=0.132 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcc
Q 024429 94 KVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM 146 (268)
Q Consensus 94 KkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 146 (268)
.+.++...+.-||+.. ..+....|...|..|++.++....+.
T Consensus 12 ~~~~~~~~~~~~~~~~-----------~~~i~~~~~~~W~~l~~~~k~~y~~~ 53 (66)
T cd00084 12 SQEHRAEVKAENPGLS-----------VGEISKILGEMWKSLSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHHHCcCCC-----------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4556777778888843 46788899999999998776655554
No 86
>PTZ00046 rifin; Provisional
Probab=23.34 E-value=3.8e+02 Score=25.57 Aligned_cols=52 Identities=12% Similarity=0.172 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHhhh--hhhhhhHHHHHHHHHHH
Q 024429 202 DPEEERKILAREMKASK---EYFTNTMKRHTLV-LKKRD--LMRRKAEEEKRKAIGRL 253 (268)
Q Consensus 202 ~~r~erR~~ekenk~~r---ke~~~~ir~lv~~-~~krD--~~~~~~ee~~~k~~~~~ 253 (268)
.|.+.++.|+..+++.- +||..|+..=--- --+|| |++.-...+-+|++-+.
T Consensus 53 NDPeMK~Vme~F~rqTsQRF~EYdERM~~kRqkcKeqCDKeIQKIILKDKlEKeL~ek 110 (358)
T PTZ00046 53 NDPEMKSVMENFDRQTSQRFEEYDERMKEKRQKCKEQCDKEIQKIILKDKLEKELMEK 110 (358)
T ss_pred CcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHhh
Confidence 67888999999888776 8888887643222 22455 55555555544444333
No 87
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=22.87 E-value=94 Score=18.33 Aligned_cols=17 Identities=29% Similarity=0.411 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHhCC
Q 024429 90 EEQIKVAYRRLAKFYHP 106 (268)
Q Consensus 90 ~~eIKkaYrkla~~~HP 106 (268)
.++.+.+-|+.++.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 46788899999999993
No 88
>TIGR03342 dsrC_tusE_dsvC sulfur relay protein, TusE/DsrC/DsvC family. Members of this protein family may be described as TusE, a partner to TusBCD in a sulfur relay system for 2-thiouridine biosynthesis, a tRNA base modification process. Other members are DsrC, a functionally similar protein in species where the sulfur relay system exists primarily for sulfur metabolism rather than tRNA base modification. Some members of this family are known explicitly as the gamma subunit of sulfite reductases.
Probab=22.83 E-value=52 Score=25.85 Aligned_cols=18 Identities=28% Similarity=0.405 Sum_probs=15.1
Q ss_pred HHHHHHHHHHhccccCCc
Q 024429 247 RKAIGRLLAAEGLELDTD 264 (268)
Q Consensus 247 ~k~~~~~~~~~~~~~~~~ 264 (268)
+..++..|++|||+|.|+
T Consensus 24 e~vA~~lA~~egieLT~~ 41 (108)
T TIGR03342 24 EDVAEALAEEEGIELTEA 41 (108)
T ss_pred HHHHHHHHHHcCCCCCHH
Confidence 567888999999999875
No 89
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=21.09 E-value=2.6e+02 Score=21.01 Aligned_cols=51 Identities=12% Similarity=0.202 Sum_probs=35.5
Q ss_pred cCCCCC-CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhc-ccC
Q 024429 83 ELERDA-DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYD-MDN 148 (268)
Q Consensus 83 gl~~~a-s~~eIKkaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD-~~~ 148 (268)
|++|+. ...+|-+.+..++..+++. ..+.+..|.+.| +.||.-+..|| ..+
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~~-------------~~~~~~~l~~~y--~~~~~~~~~~~~~~~ 103 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTGG-------------DPELLRGLAQMY--VEDPRFAAMYDKKFG 103 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS----------------HHHHHHHHHHT--TSTHHHHHHHG-GGS
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhCC-------------CHHHHHHHHHHH--HcCHHHHhhccccCC
Confidence 666755 4456777888888888771 257888999999 88999999999 443
No 90
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=20.31 E-value=2.5e+02 Score=19.52 Aligned_cols=41 Identities=20% Similarity=0.105 Sum_probs=30.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcc
Q 024429 95 VAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM 146 (268)
Q Consensus 95 kaYrkla~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 146 (268)
+..+.....-||+.. ..+..+.|.+.|..|++.++...+|.
T Consensus 14 ~~~r~~~~~~~p~~~-----------~~eisk~l~~~Wk~ls~~eK~~y~~~ 54 (72)
T cd01388 14 KRHRRKVLQEYPLKE-----------NRAISKILGDRWKALSNEEKQPYYEE 54 (72)
T ss_pred HHHHHHHHHHCCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 445666677788853 36788899999999998887666554
No 91
>KOG3375 consensus Phosphoprotein/predicted coiled-coil protein [General function prediction only]
Probab=20.24 E-value=3.8e+02 Score=22.38 Aligned_cols=54 Identities=9% Similarity=0.173 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHHHHH--H--HHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHH
Q 024429 202 DPEEERKILAREMKASK--E--YFTNTMKRHTLVLKKRDLMRRKAEEEKRKAIGRLLA 255 (268)
Q Consensus 202 ~~r~erR~~ekenk~~r--k--e~~~~ir~lv~~~~krD~~~~~~ee~~~k~~~~~~~ 255 (268)
..|++|..||||..+.| + .--.+-..-+|+++--=|.+..+|..+++...+.|+
T Consensus 107 ~SRRereeiEKQrA~eRYmklh~aGKTeqAkaDLaRlalir~qReeaa~kre~ekkaa 164 (174)
T KOG3375|consen 107 ESRREREEIEKQRAKERYMKLHLAGKTEQAKADLARLALIRQQREEAAAKREAEKKAA 164 (174)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 47999999999887777 1 111122222333332224555555555555555444
Done!