BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024432
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54151|MSRA_BRANA Peptide methionine sulfoxide reductase OS=Brassica napus GN=PMSR
PE=2 SV=1
Length = 257
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/257 (71%), Positives = 210/257 (81%), Gaps = 9/257 (3%)
Query: 19 TISKSPLLLISSSLSSP-----KNPLSLSK-PNPTH-FPLTARPISTHYKPPMNILNKLG 71
+I SP ++ + SLS P K LSLSK PT FP TAR IS + P N+ +LG
Sbjct: 3 SIVASPPVISAVSLSKPLQSLAKAALSLSKRAKPTSPFPKTARSISVYKSPMNNLFTRLG 62
Query: 72 FGFRPSPDPASTENSAIAQGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGY 131
FG RP PDPA++ SAIAQGPDDDVP+PGQQF+QFGAGCFWG ELA+QRVPGVTKTEVGY
Sbjct: 63 FGSRPQPDPAAS--SAIAQGPDDDVPSPGQQFAQFGAGCFWGAELAYQRVPGVTKTEVGY 120
Query: 132 SQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGT 191
S G++ NP+YEDVCS TT HNE+VRVQYDPKE SF++LLD+FW RHDPT LNRQGNDVGT
Sbjct: 121 SHGFVDNPTYEDVCSETTGHNEIVRVQYDPKEVSFESLLDVFWKRHDPTTLNRQGNDVGT 180
Query: 192 QYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFG 251
+YRSGIYFYT EQEK A+E++E+QQK+LNRKIVTEILPA KFYRAE YHQQYLAKGGR G
Sbjct: 181 RYRSGIYFYTDEQEKLAREAMEKQQKILNRKIVTEILPATKFYRAENYHQQYLAKGGRMG 240
Query: 252 FKQSTEKGCNDPIRCYG 268
QS EKGCNDPIRCYG
Sbjct: 241 LSQSAEKGCNDPIRCYG 257
>sp|P54150|MSRA4_ARATH Peptide methionine sulfoxide reductase A4, chloroplastic
OS=Arabidopsis thaliana GN=MSR4 PE=1 SV=2
Length = 258
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/255 (70%), Positives = 208/255 (81%), Gaps = 12/255 (4%)
Query: 23 SPLLLISSSLSSPKN-----PLSLSKPNPTH-FPLTAR-PISTHYKPPMNILNKLGFGFR 75
SP L+ ++SLS P N LS S+ P FP T+R PIS + P N+ N+LGFG R
Sbjct: 7 SPPLIAAASLSKPLNSLSKAALSFSRAKPICPFPQTSRRPISVYKSPMNNLFNRLGFGSR 66
Query: 76 PSP--DPASTENSAIAQGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQ 133
P DP+S +AIAQGPDDDVP+ GQQF+QFGAGCFWGVELA+QRVPGVTKTEVGYS
Sbjct: 67 PQAQADPSS---AAIAQGPDDDVPSSGQQFAQFGAGCFWGVELAYQRVPGVTKTEVGYSH 123
Query: 134 GYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQY 193
G +HNPSYEDVC+GTT HNEVVRVQYDPKECSF++LLD+FW RHDPT LNRQG DVGTQY
Sbjct: 124 GIVHNPSYEDVCTGTTGHNEVVRVQYDPKECSFESLLDVFWNRHDPTTLNRQGGDVGTQY 183
Query: 194 RSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFK 253
RSGIY+YT EQE+ A+E++E+QQK+LN++IVTEILPA KFYRAE YHQQYLAKGGR G +
Sbjct: 184 RSGIYYYTDEQERIAREAVEKQQKILNKRIVTEILPATKFYRAENYHQQYLAKGGRMGLR 243
Query: 254 QSTEKGCNDPIRCYG 268
QS EKGC DPIRCYG
Sbjct: 244 QSAEKGCKDPIRCYG 258
>sp|Q9SEC2|MSRA_LACSA Peptide methionine sulfoxide reductase OS=Lactuca sativa PE=2 SV=1
Length = 259
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/229 (76%), Positives = 198/229 (86%), Gaps = 7/229 (3%)
Query: 46 PTHFPLTA-RPI-----STHYKPPMNILNKLGFGFRPSPDPASTENSAIAQGPDDDVPAP 99
P+ FP+T+ +P+ S+ M+ L +LG G R +P AS + S+IAQGPDDD+PAP
Sbjct: 32 PSSFPVTSTKPLFTLRHSSSTPKIMSWLGRLGXGTR-TPADASMDQSSIAQGPDDDIPAP 90
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
GQQF+QFGAGCFWGVELAFQRVPGV+KTEVGY+QG+LHNP+Y D+CSGTTNH+EVVRVQY
Sbjct: 91 GQQFAQFGAGCFWGVELAFQRVPGVSKTEVGYTQGFLHNPTYNDICSGTTNHSEVVRVQY 150
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DPK CSFD+LLD FW RHDPT LNRQGNDVGTQYRSGIYFYTPEQEKAA E+ ER QK L
Sbjct: 151 DPKACSFDSLLDCFWERHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAIEAKERHQKKL 210
Query: 220 NRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEKGCNDPIRCYG 268
NR +VTEILPAKKFYRAEEYHQQYLAKGGRFGF+QSTEKGCNDPIRCYG
Sbjct: 211 NRTVVTEILPAKKFYRAEEYHQQYLAKGGRFGFRQSTEKGCNDPIRCYG 259
>sp|Q9FKF7|MSRA1_ARATH Peptide methionine sulfoxide reductase A1 OS=Arabidopsis thaliana
GN=MSRA1 PE=2 SV=1
Length = 202
Score = 342 bits (878), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 158/205 (77%), Positives = 179/205 (87%), Gaps = 3/205 (1%)
Query: 64 MNILNKLGFGFRPSPDPASTENSAIAQGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPG 123
MNILNKLG G S + + S IAQ DD+ PAPG QF+QFGAGCFW VELA+QRVPG
Sbjct: 1 MNILNKLGIG---SSRQTNMDPSPIAQVIDDEAPAPGNQFTQFGAGCFWSVELAYQRVPG 57
Query: 124 VTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLN 183
VT+TEVGYSQG H+PSY+DVCSGTTNH E+VRVQYDPKECS+ +LLD+FW++HDPT LN
Sbjct: 58 VTQTEVGYSQGITHDPSYKDVCSGTTNHAEIVRVQYDPKECSYQSLLDLFWSKHDPTTLN 117
Query: 184 RQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQY 243
RQGNDVGTQYRSGIYFY PEQEK A+ESLER Q+ ++RK+VTEILPAKKFYRAEE+HQQY
Sbjct: 118 RQGNDVGTQYRSGIYFYNPEQEKLARESLERHQQQVDRKVVTEILPAKKFYRAEEHHQQY 177
Query: 244 LAKGGRFGFKQSTEKGCNDPIRCYG 268
L+KGGRFG KQSTEKGCNDPIRCYG
Sbjct: 178 LSKGGRFGLKQSTEKGCNDPIRCYG 202
>sp|Q9LY14|MSRA3_ARATH Peptide methionine sulfoxide reductase A3 OS=Arabidopsis thaliana
GN=MSRA3 PE=1 SV=1
Length = 202
Score = 333 bits (855), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 155/205 (75%), Positives = 176/205 (85%), Gaps = 3/205 (1%)
Query: 64 MNILNKLGFGFRPSPDPASTENSAIAQGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPG 123
MNILN+LG G S + + S IAQG DDD PAPG QF+QFGAGCFWGVELAFQRVPG
Sbjct: 1 MNILNRLGLG---SSGQTNMDPSPIAQGNDDDTPAPGNQFAQFGAGCFWGVELAFQRVPG 57
Query: 124 VTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLN 183
VT+TE GY+QG + NPSY DVCSGTT H+EVVRVQYD +C++++LLD+FW+RHDPT LN
Sbjct: 58 VTQTEAGYTQGTVDNPSYGDVCSGTTGHSEVVRVQYDLNDCTYESLLDLFWSRHDPTTLN 117
Query: 184 RQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQY 243
RQGNDVGTQYRSGIYFYTPEQEK A+ESLER Q+ + RKI+TEILPAKKFYRAEE+HQQY
Sbjct: 118 RQGNDVGTQYRSGIYFYTPEQEKLARESLERHQQQMERKIMTEILPAKKFYRAEEHHQQY 177
Query: 244 LAKGGRFGFKQSTEKGCNDPIRCYG 268
L+KGGRFG QST KGCNDPIRCYG
Sbjct: 178 LSKGGRFGQGQSTAKGCNDPIRCYG 202
>sp|Q336R9|MSRA4_ORYSJ Peptide methionine sulfoxide reductase A4, chloroplastic OS=Oryza
sativa subsp. japonica GN=MSRA4 PE=2 SV=2
Length = 263
Score = 331 bits (849), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 149/179 (83%), Positives = 163/179 (91%)
Query: 90 QGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTT 149
QGPD+D PA G +F+QFGAGCFWGVELAFQRVPGVT+TEVGYSQG LH+P+YEDVC+G T
Sbjct: 85 QGPDEDRPAAGNEFAQFGAGCFWGVELAFQRVPGVTRTEVGYSQGNLHDPTYEDVCTGAT 144
Query: 150 NHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAK 209
HNEVVRV YD C FD LLD+FWARHDPT NRQGNDVGTQYRSGIY+YTPEQEKAA+
Sbjct: 145 YHNEVVRVHYDVSACKFDDLLDVFWARHDPTTPNRQGNDVGTQYRSGIYYYTPEQEKAAR 204
Query: 210 ESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEKGCNDPIRCYG 268
ESLE+QQK+LNR IVTEILPAK+FYRAEEYHQQYLAKGGRFGF+QS EKGCNDPIRCYG
Sbjct: 205 ESLEKQQKLLNRTIVTEILPAKRFYRAEEYHQQYLAKGGRFGFRQSAEKGCNDPIRCYG 263
>sp|Q9LY15|MSRA2_ARATH Peptide methionine sulfoxide reductase A2 OS=Arabidopsis thaliana
GN=MRSA2 PE=1 SV=1
Length = 218
Score = 305 bits (782), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 156/183 (85%)
Query: 86 SAIAQGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVC 145
S IAQ PD+DVPAPG +F++F AGCFWGVELAFQR+PGVT TEVGY+ G HNPSYEDVC
Sbjct: 36 SPIAQEPDNDVPAPGNEFAEFAAGCFWGVELAFQRIPGVTVTEVGYTHGISHNPSYEDVC 95
Query: 146 SGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQE 205
+ TTNH EVVRVQYDPKEC+++TLLD+FW+RH+PT LNRQG +G QYRSGIYFYTPEQE
Sbjct: 96 TNTTNHAEVVRVQYDPKECTYETLLDLFWSRHNPTTLNRQGELLGAQYRSGIYFYTPEQE 155
Query: 206 KAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEKGCNDPIR 265
K A+ESLE++QK L KIVTEILPAKKFY+AEEYHQQYL KGG G QS K C DPIR
Sbjct: 156 KLARESLEKEQKKLEDKIVTEILPAKKFYKAEEYHQQYLVKGGMHGNAQSPAKSCKDPIR 215
Query: 266 CYG 268
CYG
Sbjct: 216 CYG 218
>sp|P54153|MSRA_SOLLC Peptide methionine sulfoxide reductase (Fragment) OS=Solanum
lycopersicum GN=E4 PE=3 SV=1
Length = 196
Score = 267 bits (682), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 127/189 (67%), Positives = 149/189 (78%), Gaps = 4/189 (2%)
Query: 82 STENSAIAQGPDDDVP-APGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPS 140
ST N A+ PD D P PG +F+QF AGCFWGVELAFQRV GV KTEVGYSQG +H+P+
Sbjct: 10 STTNPAL--DPDLDSPDQPGLEFAQFAAGCFWGVELAFQRVGGVVKTEVGYSQGNVHDPN 67
Query: 141 YEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFY 200
Y+ +CSGTT H E +R+Q+DP C + LL +FW+RHDPT LNRQGNDVG QYRSGIY+Y
Sbjct: 68 YKLICSGTTEHAEAIRIQFDPNVCPYSNLLSLFWSRHDPTTLNRQGNDVGKQYRSGIYYY 127
Query: 201 TPEQEKAAKESLERQQK-VLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEKG 259
Q + A+ESLE +QK +++KIVTEILPAK+FYRAEEYHQQYL KGG G KQS KG
Sbjct: 128 NDAQAQLARESLEAKQKEFMDKKIVTEILPAKRFYRAEEYHQQYLEKGGGRGCKQSAAKG 187
Query: 260 CNDPIRCYG 268
CNDPIRCYG
Sbjct: 188 CNDPIRCYG 196
>sp|P54152|MSRA_FRAAN Peptide methionine sulfoxide reductase OS=Fragaria ananassa PE=2
SV=2
Length = 191
Score = 259 bits (662), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/190 (64%), Positives = 149/190 (78%), Gaps = 2/190 (1%)
Query: 81 ASTENSAIAQGPDDDVPA-PGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNP 139
AS+ + A D D P PG + +QF +GCFWG EL FQRV GV KTEVGYSQG++H+P
Sbjct: 2 ASSTTNNPALDLDSDTPENPGHELAQFASGCFWGSELRFQRVVGVIKTEVGYSQGHVHDP 61
Query: 140 SYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYF 199
+Y VCSGTTNH+EVVRVQ+DP+ C + LL +FW+RHDPT LNRQG DVGTQYRSGIY+
Sbjct: 62 NYRLVCSGTTNHSEVVRVQFDPQVCPYSDLLSVFWSRHDPTTLNRQGGDVGTQYRSGIYY 121
Query: 200 YTPEQEKAAKESLERQQKVL-NRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEK 258
Y EQ+ AK+S E +QK ++++VTEILPAK+FYRAEEYHQQYL KGG G KQS +K
Sbjct: 122 YNEEQDCLAKKSKEAKQKEFKDKRVVTEILPAKRFYRAEEYHQQYLEKGGGNGNKQSAQK 181
Query: 259 GCNDPIRCYG 268
GCNDPI+CYG
Sbjct: 182 GCNDPIKCYG 191
>sp|Q7XUP7|MSR21_ORYSJ Peptide methionine sulfoxide reductase A2-1 OS=Oryza sativa subsp.
japonica GN=MSRA2-1 PE=2 SV=2
Length = 187
Score = 258 bits (659), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/181 (66%), Positives = 140/181 (77%), Gaps = 6/181 (3%)
Query: 89 AQGPDDDVPA-PGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSG 147
A GPD D A G + +QF AGCFW VEL +QR+PGV +TEVGYSQG+ H P+Y DVC G
Sbjct: 12 ALGPDADAAAGEGLELAQFAAGCFWSVELTYQRLPGVARTEVGYSQGHRHEPTYRDVCGG 71
Query: 148 TTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKA 207
T H EVVRV YDPK C ++ LLD+FWA+H+PT LNRQGNDVGTQYRSGIY+YT EQEKA
Sbjct: 72 GTGHAEVVRVHYDPKACPYEVLLDVFWAKHNPTTLNRQGNDVGTQYRSGIYYYTAEQEKA 131
Query: 208 AKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEKGCNDPIRCY 267
A++SL +QK +IVTEILPA +FY AEEYHQ+YL KGG QS +K CNDPIRCY
Sbjct: 132 ARDSLAEKQKEWKERIVTEILPATRFYPAEEYHQRYLEKGG-----QSAKKSCNDPIRCY 186
Query: 268 G 268
G
Sbjct: 187 G 187
>sp|Q7XUP6|MSR22_ORYSJ Peptide methionine sulfoxide reductase A2-2 OS=Oryza sativa subsp.
japonica GN=MSRA2-2 PE=2 SV=2
Length = 190
Score = 239 bits (610), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 135/179 (75%), Gaps = 6/179 (3%)
Query: 91 GPDDDVPA-PGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTT 149
GPD D A G + +QF AGCFW VEL +QR+PGV +TEVG+SQG+ H P+Y+DVC T
Sbjct: 17 GPDADAAAGEGLELAQFAAGCFWSVELTYQRLPGVARTEVGFSQGHHHEPTYDDVCGQGT 76
Query: 150 NHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAK 209
H EVVRV YDPK C + LLD+FWA+H PT L RQG++ GTQYRSGIY+YT EQE+ A+
Sbjct: 77 GHAEVVRVHYDPKACPYGVLLDVFWAKHRPTTLIRQGDEAGTQYRSGIYYYTAEQERVAR 136
Query: 210 ESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEKGCNDPIRCYG 268
ESLE +Q+ KIVTEILPA++FY AEEYHQ+YL KGG QS +KGC DPIR YG
Sbjct: 137 ESLEAKQEEWKEKIVTEILPARRFYPAEEYHQRYLEKGG-----QSAQKGCTDPIRRYG 190
>sp|A3CUG3|MSRA_METMJ Peptide methionine sulfoxide reductase MsrA OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=msrA
PE=3 SV=1
Length = 164
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 102/147 (69%), Gaps = 2/147 (1%)
Query: 104 SQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKE 163
+ FGAGCFWGVE AF+RVPGV +T VG+ G + NP+Y +VC+G T H EVV+V YDP
Sbjct: 10 ATFGAGCFWGVEEAFRRVPGVVETAVGFMGGTVENPTYPEVCTGRTGHAEVVQVTYDPGT 69
Query: 164 CSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLER--QQKVLNR 221
S+ LLD FW HDPT NRQG D+GTQYRS I+ +TPEQE A+ S E Q R
Sbjct: 70 VSYRALLDTFWDAHDPTTPNRQGPDIGTQYRSVIFVHTPEQEAEARASKEEMDQSGKFRR 129
Query: 222 KIVTEILPAKKFYRAEEYHQQYLAKGG 248
IVT I PA F+RAEEYHQQY AK G
Sbjct: 130 PIVTAIEPAGTFWRAEEYHQQYFAKRG 156
>sp|O26635|MSRA_METTH Peptide methionine sulfoxide reductase MsrA OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=msrA PE=3 SV=1
Length = 169
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 103/148 (69%), Gaps = 2/148 (1%)
Query: 104 SQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKE 163
+ FGAGCFWGVE AF++V GV T VGY G+L NP+YEDVC+G T H EVV V +DP
Sbjct: 10 ATFGAGCFWGVEDAFRKVDGVVSTRVGYMGGHLENPTYEDVCTGLTGHAEVVEVTFDPDV 69
Query: 164 CSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKV--LNR 221
+ LLD+FW+ HDPT LNRQG DVG QYRS I++++ EQ +AA ES R ++
Sbjct: 70 VGYSDLLDVFWSIHDPTTLNRQGPDVGEQYRSVIFYHSDEQRRAAIESRRRLEESGRFRD 129
Query: 222 KIVTEILPAKKFYRAEEYHQQYLAKGGR 249
+IVT I PA FY AEEYHQQYL K R
Sbjct: 130 RIVTAIEPAGTFYEAEEYHQQYLEKNPR 157
>sp|Q551H3|MSRA_DICDI Peptide methionine sulfoxide reductase OS=Dictyostelium discoideum
GN=msrA PE=3 SV=1
Length = 147
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 100/140 (71%)
Query: 106 FGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECS 165
F AGCFW VEL FQRV GVTKT VGY+ G + NP+Y VCSG T E V ++YDP++ +
Sbjct: 6 FAAGCFWSVELLFQRVAGVTKTRVGYTNGTVENPTYRQVCSGKTGCAEAVELEYDPEKVT 65
Query: 166 FDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVT 225
++ LL +FW++HDPT LNRQGNDVGTQYRSGIY++ EQ+ A S E++Q I T
Sbjct: 66 YNQLLGLFWSKHDPTTLNRQGNDVGTQYRSGIYYHNEEQKNEAIASKEKEQLKYKDPIST 125
Query: 226 EILPAKKFYRAEEYHQQYLA 245
EILPA FY AE HQQYL
Sbjct: 126 EILPAGVFYPAETEHQQYLG 145
>sp|Q747V4|MSRA_GEOSL Peptide methionine sulfoxide reductase MsrA OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=msrA PE=3 SV=1
Length = 162
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 105/147 (71%), Gaps = 2/147 (1%)
Query: 104 SQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKE 163
+ FGAGCFW VE F+RVPGV T GY G+ +P+YE+VCS TT H EVV V +DP
Sbjct: 10 ATFGAGCFWHVEEEFRRVPGVVSTLAGYMGGWKEHPTYEEVCSKTTGHAEVVEVTFDPAA 69
Query: 164 CSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLN--R 221
++D LL +FW HDPT LNRQG D+GT YRS I++++P+QE+AA+ SLE +Q+ R
Sbjct: 70 VTYDHLLRVFWDCHDPTQLNRQGPDIGTNYRSVIFYHSPDQERAARASLEHEQRSGRHAR 129
Query: 222 KIVTEILPAKKFYRAEEYHQQYLAKGG 248
IVTEI+PA F+ AEEYHQ YL K G
Sbjct: 130 PIVTEIVPAATFWWAEEYHQHYLEKRG 156
>sp|Q39Z11|MSRA_GEOMG Peptide methionine sulfoxide reductase MsrA OS=Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
GN=msrA PE=3 SV=1
Length = 162
Score = 174 bits (440), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 104/152 (68%), Gaps = 2/152 (1%)
Query: 99 PGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQ 158
P + + FGAGCFW VE F+RV GV T GY G+ +P+YE+VCS T H EVV V
Sbjct: 5 PELEKATFGAGCFWHVEAEFRRVSGVVATHAGYMGGWKDHPTYEEVCSKETGHAEVVEVV 64
Query: 159 YDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQ--Q 216
YDP S+D LL +FW HDPT LNRQG D+GT YRS I+F+TPEQE+AA+ S+E++
Sbjct: 65 YDPARVSYDELLRIFWTIHDPTQLNRQGPDIGTNYRSVIFFHTPEQEQAARLSMEKEGGS 124
Query: 217 KVLNRKIVTEILPAKKFYRAEEYHQQYLAKGG 248
+R IVTEI A F+ AEEYHQQYL K G
Sbjct: 125 GRYSRPIVTEIASASAFWWAEEYHQQYLEKRG 156
>sp|B7K079|MSRA_CYAP8 Peptide methionine sulfoxide reductase MsrA OS=Cyanothece sp.
(strain PCC 8801) GN=msrA PE=3 SV=1
Length = 217
Score = 174 bits (440), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 105/151 (69%), Gaps = 4/151 (2%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + FG GCFWG E F + GV T VGY+ G NP+Y++VC+G T HNEVV V +
Sbjct: 46 GLETAMFGLGCFWGAERKFWQCEGVYTTAVGYAAGITPNPTYQEVCTGLTGHNEVVLVVF 105
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DPK S++ LL +FW H+PT RQGNDVGTQYRSGIY Y+P+ +KAA+ S E QK L
Sbjct: 106 DPKIISYEELLKVFWESHNPTQGMRQGNDVGTQYRSGIYVYSPQHKKAAETSKEVYQKAL 165
Query: 220 NRK----IVTEILPAKKFYRAEEYHQQYLAK 246
N+ I TEIL A +FY AE+YHQQYLAK
Sbjct: 166 NQAGYGDITTEILDAPEFYYAEDYHQQYLAK 196
>sp|Q21JK7|MSRA_SACD2 Peptide methionine sulfoxide reductase MsrA OS=Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=msrA
PE=3 SV=1
Length = 215
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/145 (57%), Positives = 102/145 (70%), Gaps = 4/145 (2%)
Query: 106 FGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECS 165
FG GCFWG E F ++PGV T VGYS G+ NP+YE+VCSG+T HNEVV V Y+P + S
Sbjct: 53 FGLGCFWGAERKFWQLPGVYVTAVGYSAGFTPNPTYEEVCSGSTGHNEVVLVVYNPSQVS 112
Query: 166 FDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRK--- 222
F LL +FW H+PT RQGND+GTQYRSG+Y Y+ EQ + A+ S + Q +L K
Sbjct: 113 FKKLLAVFWESHNPTQGMRQGNDLGTQYRSGVYVYSDEQAEQAEHSKQVVQAMLTEKGYG 172
Query: 223 -IVTEILPAKKFYRAEEYHQQYLAK 246
I TEI+ AK+FY AE YHQQYLAK
Sbjct: 173 EITTEIIKAKEFYFAEAYHQQYLAK 197
>sp|A7MM56|MSRA_CROS8 Peptide methionine sulfoxide reductase MsrA OS=Cronobacter
sakazakii (strain ATCC BAA-894) GN=msrA PE=3 SV=1
Length = 212
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F +PGV T GY+ GY NP+Y +VCSG T H E VRV Y
Sbjct: 42 GMEVALFAMGCFWGVERLFWALPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAVRVVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGNDVGTQYRS IY TPEQE AA+ SLER + +
Sbjct: 102 DPNVISYEQLLQVFWENHDPAQGMRQGNDVGTQYRSAIYPLTPEQEAAAQASLERFRAAM 161
Query: 220 N-----RKIVTEILPAKKFYRAEEYHQQYLAK 246
R I TEI PAK FY AE+ HQQYL K
Sbjct: 162 EAAGDYRHITTEIAPAKPFYYAEDEHQQYLHK 193
>sp|P72622|MSRA1_SYNY3 Peptide methionine sulfoxide reductase MsrA 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=msrA1 PE=3 SV=1
Length = 222
Score = 171 bits (433), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 107/151 (70%), Gaps = 4/151 (2%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + FG GCFWG E F ++PGV T VGY+ GY NP+Y++VC+G T HNEVV V +
Sbjct: 47 GMETALFGLGCFWGAERKFWQIPGVYSTAVGYAAGYTPNPTYQEVCTGMTGHNEVVLVAF 106
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP++ S+D LL +FW H+PT RQGNDVGTQYRSGIY Y+ Q++AA S + Q+ L
Sbjct: 107 DPQQVSYDQLLKVFWESHNPTQGMRQGNDVGTQYRSGIYTYSEAQQQAALASKQAYQQAL 166
Query: 220 NR----KIVTEILPAKKFYRAEEYHQQYLAK 246
+ +I TEILPA FY AE+YHQQYLAK
Sbjct: 167 QQAGYGEITTEILPAPDFYYAEDYHQQYLAK 197
>sp|B5Y2Y3|MSRA_KLEP3 Peptide methionine sulfoxide reductase MsrA OS=Klebsiella
pneumoniae (strain 342) GN=msrA PE=3 SV=1
Length = 211
Score = 171 bits (432), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 110/177 (62%), Gaps = 7/177 (3%)
Query: 75 RPSPDPASTENSAIAQGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQG 134
R +P P +T + A+ +VPA G + + F GCFWGVE F ++PGV T GY+ G
Sbjct: 19 RNTPMPVATLH-AVNGHSMTNVPA-GMEVALFAMGCFWGVERLFWQLPGVYSTAAGYTGG 76
Query: 135 YLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYR 194
Y NP+Y +VCSG T H E VRV YDP+ S++ LL +FW HDP RQGND GTQYR
Sbjct: 77 YTPNPTYREVCSGQTGHAEAVRVVYDPQVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
Query: 195 SGIYFYTPEQEKAAKESLERQQKVLN-----RKIVTEILPAKKFYRAEEYHQQYLAK 246
S IY TPEQ AAK SL R Q +N R I TEI AK FY AE+ HQQYL K
Sbjct: 137 SAIYPLTPEQTAAAKASLARFQAAMNDAHDTRHITTEIATAKPFYYAEDDHQQYLYK 193
>sp|Q8TQV6|MSRA_METAC Peptide methionine sulfoxide reductase MsrA OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=msrA PE=3 SV=1
Length = 188
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Query: 97 PAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVR 156
P G + + F AGCFWG+E AF++V GV T VGYS G+ P+YE VC+ T H E VR
Sbjct: 24 PGEGLEKATFAAGCFWGIEEAFRQVKGVVATAVGYSGGHFEKPTYEQVCTLDTGHAEAVR 83
Query: 157 VQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQ 216
V +DPK S+ LLD+FW HDPT NRQG DVG QYRS I+++ EQ+ AA S E +
Sbjct: 84 VIFDPKVVSYKNLLDVFWKIHDPTTKNRQGPDVGKQYRSVIFYHNEEQKAAALASKEELE 143
Query: 217 K--VLNRKIVTEILPAKKFYRAEEYHQQYLAKGG 248
K V IVTEI+P +FY AE+YHQQY K G
Sbjct: 144 KAGVFKNPIVTEIVPVSEFYMAEDYHQQYFEKKG 177
>sp|B6I2D2|MSRA_ECOSE Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain SE11) GN=msrA PE=3 SV=1
Length = 212
Score = 167 bits (423), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDQGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R+I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRRITTEIANATPFYYAEDDHQQYLHK 193
>sp|B7NGF6|MSRA_ECOLU Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 167 bits (422), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R+I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRRITTEIANATPFYYAEDDHQQYLHK 193
>sp|B7MTA1|MSRA_ECO81 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli O81
(strain ED1a) GN=msrA PE=3 SV=1
Length = 212
Score = 167 bits (422), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R+I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRRITTEIANATPFYYAEDDHQQYLHK 193
>sp|B7NUD2|MSRA_ECO7I Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 167 bits (422), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R+I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRRITTEIANATPFYYAEDDHQQYLHK 193
>sp|C6DDM6|MSRA_PECCP Peptide methionine sulfoxide reductase MsrA OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=msrA PE=3
SV=1
Length = 212
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 97/146 (66%), Gaps = 5/146 (3%)
Query: 106 FGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECS 165
F GCFWGVE F + PG+ T GY GY NP+Y +VCSG T+H E VRV +DP S
Sbjct: 48 FAMGCFWGVERLFWQQPGIYSTAAGYIGGYTPNPTYREVCSGQTDHAEAVRVVFDPAVIS 107
Query: 166 FDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLN----- 220
+D LL +FW HDP RQG D+G+QYRS IY TPEQE+AA+ESL+R Q+ +
Sbjct: 108 YDQLLQLFWENHDPAQGMRQGGDIGSQYRSAIYTLTPEQEQAAQESLQRFQQAMREKGDV 167
Query: 221 RKIVTEILPAKKFYRAEEYHQQYLAK 246
R I TEI+PA FY AE+ HQQYL K
Sbjct: 168 RAISTEIVPAGPFYYAEDDHQQYLYK 193
>sp|A8M3K6|MSRA_SALAI Peptide methionine sulfoxide reductase MsrA OS=Salinispora
arenicola (strain CNS-205) GN=msrA PE=3 SV=1
Length = 220
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 100/150 (66%), Gaps = 4/150 (2%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G Q + FG GCFWG E F +PGV T VGY+ GY NPSYE+VCSG T H EVV+V+Y
Sbjct: 44 GTQVAVFGMGCFWGAERLFWTLPGVLTTSVGYAGGYTPNPSYEEVCSGRTGHAEVVQVRY 103
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP + +++ LL +FW HDPT RQGNDVGTQYRS IY T EQ AA+ S + V+
Sbjct: 104 DPTKIAYEDLLKVFWENHDPTQGMRQGNDVGTQYRSAIYTTTEEQLTAAQASRDAFAPVV 163
Query: 220 NR----KIVTEILPAKKFYRAEEYHQQYLA 245
R +I TEI P +Y AE+YHQQYLA
Sbjct: 164 ARAGKGEITTEIGPLGDYYFAEDYHQQYLA 193
>sp|B1LRA3|MSRA_ECOSM Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R+I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRRITTEIANATPFYYAEDDHQQYLHK 193
>sp|B2TZL3|MSRA_SHIB3 Peptide methionine sulfoxide reductase MsrA OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=msrA PE=3
SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVESLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|Q3YUC8|MSRA_SHISS Peptide methionine sulfoxide reductase MsrA OS=Shigella sonnei
(strain Ss046) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|P0A745|MSRA_SHIFL Peptide methionine sulfoxide reductase MsrA OS=Shigella flexneri
GN=msrA PE=3 SV=2
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|Q0SXG5|MSRA_SHIF8 Peptide methionine sulfoxide reductase MsrA OS=Shigella flexneri
serotype 5b (strain 8401) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|P0A744|MSRA_ECOLI Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12) GN=msrA PE=1 SV=2
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|B1ISY2|MSRA_ECOLC Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|A8A7X5|MSRA_ECOHS Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O9:H4 (strain HS) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|B1XDW8|MSRA_ECODH Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12 / DH10B) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|C4ZR95|MSRA_ECOBW Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|B7M9I1|MSRA_ECO8A Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli O8
(strain IAI1) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|B7LCT1|MSRA_ECO55 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain 55989 / EAEC) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|B7MLN1|MSRA_ECO45 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|A7ZV98|MSRA_ECO24 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|Q31TF9|MSRA_SHIBS Peptide methionine sulfoxide reductase MsrA OS=Shigella boydii
serotype 4 (strain Sb227) GN=msrA PE=3 SV=1
Length = 212
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRHITTEIANATPFYYAEDDHQQYLHK 193
>sp|A9N540|MSRA_SALPB Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=msrA PE=3 SV=1
Length = 212
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 109/177 (61%), Gaps = 7/177 (3%)
Query: 75 RPSPDPASTENSAIAQGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQG 134
R +P P +T + A+ + +VPA G + + F GCFWGVE F ++PGV T GY+ G
Sbjct: 19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGG 76
Query: 135 YLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYR 194
Y NP+Y +VCSG T H E VR+ YDP S++ LL +FW HDPT +QGND GTQYR
Sbjct: 77 YTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQIFWENHDPTQGMQQGNDHGTQYR 136
Query: 195 SGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
S IY TPEQ AA S ER Q + +R I TEI A FY AE+ HQQYL K
Sbjct: 137 SAIYPLTPEQNAAAHASCERFQSAMAAAGDHRPITTEIAHATPFYYAEDEHQQYLHK 193
>sp|Q8PUD6|MSRA_METMA Peptide methionine sulfoxide reductase MsrA OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=msrA PE=3 SV=1
Length = 211
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 104/155 (67%), Gaps = 4/155 (2%)
Query: 97 PAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVR 156
P G + + F AGCFWG+E AF+++ GV T VGYS G+ P+YE VC+ T H E VR
Sbjct: 47 PGEGLEKATFAAGCFWGIEEAFRQIKGVVATAVGYSGGHFKRPTYEQVCTLDTGHAEAVR 106
Query: 157 VQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAA---KESLE 213
V +DP+ S+ TLLD+FW HDPT +RQG DVG QYRS I++++ EQ+ AA KE LE
Sbjct: 107 VIFDPEIVSYKTLLDVFWKIHDPTTKDRQGPDVGKQYRSVIFYHSDEQKAAALASKEELE 166
Query: 214 RQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGG 248
+ N +VTEI+P +FY AE+YHQQY K G
Sbjct: 167 KSGAFKN-PVVTEIVPVSEFYMAEDYHQQYFEKKG 200
>sp|Q328B8|MSRA_SHIDS Peptide methionine sulfoxide reductase MsrA OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=msrA PE=3 SV=1
Length = 212
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++P V T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPSVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQIFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R+I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRRITTEIANATPFYYAEDDHQQYLHK 193
>sp|Q0T9G6|MSRA_ECOL5 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 164 bits (416), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 5/152 (3%)
Query: 100 GQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQY 159
G + + F GCFWGVE F ++PGV T GY+ GY NP+Y +VCSG T H E VR+ Y
Sbjct: 42 GMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVY 101
Query: 160 DPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL 219
DP S++ LL +FW HDP RQGND TQYRS IY TPEQ+ AA+ SLER Q +
Sbjct: 102 DPSVISYEQLLQVFWENHDPAQGMRQGNDHSTQYRSAIYPLTPEQDAAARASLERFQAAM 161
Query: 220 -----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
+R+I TEI A FY AE+ HQQYL K
Sbjct: 162 LAADDDRRITTEIANATPFYYAEDDHQQYLHK 193
>sp|A8G8X6|MSRA_SERP5 Peptide methionine sulfoxide reductase MsrA OS=Serratia
proteamaculans (strain 568) GN=msrA PE=3 SV=1
Length = 213
Score = 164 bits (416), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 108/181 (59%), Gaps = 15/181 (8%)
Query: 75 RPSPDPASTEN----SAIAQGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVG 130
R +P P +T N ++ Q PD G + + F GCFWGVE F + GV T G
Sbjct: 20 RTTPMPVATLNVVTDHSMTQVPD------GLEVAIFAMGCFWGVERLFWQQQGVYSTAAG 73
Query: 131 YSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVG 190
YS GY NP+Y +VCSG T H EVVRV +DPK S+ LL +FW HDP RQG DVG
Sbjct: 74 YSGGYTPNPTYREVCSGQTGHTEVVRVVFDPKIISYKQLLQVFWENHDPAQGMRQGGDVG 133
Query: 191 TQYRSGIYFYTPEQEKAAKESLERQQKVLN-----RKIVTEILPAKKFYRAEEYHQQYLA 245
TQYRS IY TPEQ+ A+ SL+R Q+ + R I TE+ PA FY AE+ HQQYL
Sbjct: 134 TQYRSAIYTLTPEQQTEAESSLQRFQQAMEQAGDKRAITTEVAPALPFYYAEDDHQQYLY 193
Query: 246 K 246
K
Sbjct: 194 K 194
>sp|A9MEZ2|MSRA_SALAR Peptide methionine sulfoxide reductase MsrA OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=msrA PE=3
SV=1
Length = 212
Score = 164 bits (415), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 75 RPSPDPASTENSAIAQGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQG 134
R +P P +T + A+ + +VPA G + + F GCFWGVE F ++PGV T GY+ G
Sbjct: 19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGG 76
Query: 135 YLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYR 194
Y NP+Y +VCSG T H E VRV YDP S++ LL +FW HDP RQGND GTQYR
Sbjct: 77 YTPNPTYREVCSGQTGHAEAVRVVYDPAVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
Query: 195 SGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
S IY TPEQ AA S ER Q + R I TEI A FY AE+ HQQYL K
Sbjct: 137 SAIYPLTPEQSTAAHASRERFQSAMADAGDERPITTEIAHATPFYYAEDEHQQYLHK 193
>sp|Q8ZK71|MSRA_SALTY Peptide methionine sulfoxide reductase MsrA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=msrA PE=3 SV=1
Length = 212
Score = 164 bits (415), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 75 RPSPDPASTENSAIAQGPDDDVPAPGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQG 134
R +P P +T + A+ + +VPA G + + F GCFWGVE F ++PGV T GY+ G
Sbjct: 19 RNTPMPIATLH-AVNEHSMTNVPA-GMEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGG 76
Query: 135 YLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYR 194
Y NP+Y +VCSG T H E VR+ YDP S++ LL FW HDPT +QGND GTQYR
Sbjct: 77 YTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYR 136
Query: 195 SGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 246
S IY TPEQ AA S ER Q + +R I TEI A FY AE+ HQQYL K
Sbjct: 137 SAIYPLTPEQNAAAHASRERFQSAMTAAGDHRPITTEIAHATPFYYAEDEHQQYLHK 193
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,484,581
Number of Sequences: 539616
Number of extensions: 4674778
Number of successful extensions: 15151
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 14464
Number of HSP's gapped (non-prelim): 451
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)