Query 024432
Match_columns 268
No_of_seqs 248 out of 1140
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 08:08:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024432.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024432hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j89_A Methionine sulfoxide re 100.0 2.3E-94 7.9E-99 655.5 15.7 246 21-268 16-261 (261)
2 1ff3_A Peptide methionine sulf 100.0 2.2E-74 7.6E-79 512.5 18.5 166 99-265 40-210 (211)
3 1fvg_A Peptide methionine sulf 100.0 1.3E-72 4.6E-77 497.3 16.6 155 99-254 41-199 (199)
4 3bqh_A PILB, peptide methionin 100.0 1.1E-72 3.6E-77 496.1 15.9 157 101-258 2-158 (193)
5 3pim_A Peptide methionine sulf 100.0 1E-72 3.5E-77 494.1 11.7 155 99-254 17-179 (187)
6 4gwb_A Peptide methionine sulf 100.0 9.4E-70 3.2E-74 468.7 16.0 157 101-261 2-160 (168)
7 1nwa_A Peptide methionine sulf 100.0 4.7E-67 1.6E-71 463.1 15.5 149 101-254 25-176 (203)
8 3e0m_A Peptide methionine sulf 100.0 2.9E-67 9.9E-72 488.9 12.7 155 101-258 2-156 (313)
9 3dxs_X Copper-transporting ATP 95.9 0.0089 3E-07 41.3 4.2 47 108-173 14-60 (74)
10 1cpz_A Protein (COPZ); copper 95.3 0.029 9.9E-07 36.8 5.0 47 108-173 12-58 (68)
11 1osd_A MERP, hypothetical prot 95.2 0.029 1E-06 37.3 4.8 47 108-173 15-61 (72)
12 2l3m_A Copper-ION-binding prot 95.1 0.021 7.1E-07 38.1 3.8 47 108-173 17-63 (71)
13 1p6t_A Potential copper-transp 95.1 0.022 7.6E-07 44.1 4.5 48 108-174 86-133 (151)
14 2ldi_A Zinc-transporting ATPas 94.8 0.048 1.6E-06 35.7 4.9 46 108-172 15-60 (71)
15 1opz_A Potential copper-transp 94.7 0.054 1.8E-06 36.1 5.0 47 108-173 18-64 (76)
16 2qif_A Copper chaperone COPZ; 94.6 0.037 1.3E-06 35.8 4.0 46 108-172 14-59 (69)
17 1q8l_A Copper-transporting ATP 94.4 0.079 2.7E-06 37.4 5.5 47 108-173 21-67 (84)
18 1yjr_A Copper-transporting ATP 94.4 0.05 1.7E-06 36.5 4.2 47 108-173 16-62 (75)
19 3cjk_B Copper-transporting ATP 94.4 0.047 1.6E-06 36.9 4.2 47 108-173 14-60 (75)
20 1y3j_A Copper-transporting ATP 94.3 0.051 1.8E-06 37.2 4.3 47 108-173 15-61 (77)
21 1kvi_A Copper-transporting ATP 94.3 0.054 1.9E-06 37.1 4.4 47 108-173 20-66 (79)
22 2g9o_A Copper-transporting ATP 94.3 0.033 1.1E-06 40.5 3.5 47 108-173 15-61 (90)
23 1aw0_A Menkes copper-transport 94.1 0.036 1.2E-06 36.9 3.1 47 108-173 15-61 (72)
24 2ofg_X Zinc-transporting ATPas 94.0 0.075 2.6E-06 40.4 5.0 47 108-173 20-66 (111)
25 2ew9_A Copper-transporting ATP 93.9 0.031 1.1E-06 42.9 2.8 47 108-173 92-138 (149)
26 2xmw_A PACS-N, cation-transpor 93.8 0.057 1.9E-06 35.7 3.6 46 108-173 15-60 (71)
27 4a4j_A Pacszia, cation-transpo 93.5 0.083 2.9E-06 35.7 4.1 46 108-173 14-59 (69)
28 2kt2_A Mercuric reductase; nme 93.1 0.1 3.5E-06 34.5 4.0 46 108-173 12-57 (69)
29 1yg0_A COP associated protein; 93.0 0.14 4.7E-06 33.2 4.4 46 108-173 13-58 (66)
30 1jww_A Potential copper-transp 92.4 0.1 3.6E-06 35.4 3.3 47 108-173 15-61 (80)
31 2rop_A Copper-transporting ATP 91.0 0.23 7.9E-06 40.9 4.5 47 108-173 134-180 (202)
32 2kkh_A Putative heavy metal tr 90.8 0.37 1.3E-05 34.8 5.0 47 108-173 28-74 (95)
33 1fvq_A Copper-transporting ATP 90.8 0.19 6.6E-06 33.2 3.2 46 108-173 14-59 (72)
34 1mwy_A ZNTA; open-faced beta-s 90.0 0.45 1.5E-05 31.9 4.6 44 108-172 15-58 (73)
35 2rop_A Copper-transporting ATP 88.9 0.5 1.7E-05 38.9 4.9 46 108-172 32-77 (202)
36 2ew9_A Copper-transporting ATP 87.1 0.6 2.1E-05 35.5 4.1 47 108-173 16-62 (149)
37 3j09_A COPA, copper-exporting 83.4 0.8 2.7E-05 46.1 4.0 49 108-175 14-62 (723)
38 3fry_A Probable copper-exporti 80.6 0.94 3.2E-05 31.2 2.4 43 107-173 16-58 (73)
39 1cc8_A Protein (metallochapero 79.5 1.8 6.1E-05 29.4 3.5 45 107-173 15-60 (73)
40 3iwl_A Copper transport protei 78.6 1.4 4.7E-05 30.0 2.7 44 108-174 13-56 (68)
41 2kwa_A Kinase A inhibitor; bac 75.5 1.1 3.7E-05 34.2 1.6 31 121-172 45-85 (101)
42 1p6t_A Potential copper-transp 72.3 4.4 0.00015 30.9 4.4 46 108-172 18-63 (151)
43 2crl_A Copper chaperone for su 69.1 3.5 0.00012 30.5 3.1 45 107-173 29-73 (98)
44 2phc_B Uncharacterized protein 68.7 6.2 0.00021 34.8 5.1 39 114-173 30-70 (225)
45 2kyz_A Heavy metal binding pro 68.5 1.5 5.2E-05 28.9 0.8 41 108-172 13-53 (67)
46 2roe_A Heavy metal binding pro 67.8 4.2 0.00014 26.5 3.0 27 108-134 12-38 (66)
47 2k2p_A Uncharacterized protein 64.1 2.8 9.4E-05 30.2 1.6 27 108-134 34-60 (85)
48 1ans_A Neurotoxin III; NMR {An 60.9 2.1 7.2E-05 26.5 0.3 6 108-113 9-14 (27)
49 3va7_A KLLA0E08119P; carboxyla 54.5 23 0.00079 38.3 7.2 72 112-207 866-942 (1236)
50 2aj0_A Probable cadmium-transp 52.4 3.6 0.00012 27.2 0.5 25 108-132 15-39 (71)
51 2xmm_A SSR2857 protein, ATX1; 50.0 2.6 9E-05 26.7 -0.6 27 108-134 13-39 (64)
52 3oep_A Putative uncharacterize 49.1 35 0.0012 33.5 6.9 71 112-209 22-94 (494)
53 1qup_A Superoxide dismutase 1 36.5 38 0.0013 29.2 4.5 46 107-174 16-61 (222)
54 3pvh_A UPF0603 protein AT1G547 33.0 89 0.0031 25.2 6.0 49 200-248 25-74 (153)
55 2kpt_A Putative secreted prote 23.8 1.2E+02 0.0042 24.4 5.3 49 200-248 24-72 (148)
56 2j89_A Methionine sulfoxide re 23.4 17 0.00058 33.2 0.0 27 10-36 12-38 (261)
57 3mml_B Allophanate hydrolase s 21.4 1.7E+02 0.0059 25.6 6.1 67 120-209 53-121 (228)
58 1xd7_A YWNA; structural genomi 20.4 20 0.00068 28.4 -0.2 40 113-173 39-80 (145)
No 1
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=100.00 E-value=2.3e-94 Score=655.51 Aligned_cols=246 Identities=79% Similarity=1.293 Sum_probs=176.0
Q ss_pred cCcceeehccccCCCCCCCCcCCCCCCCCCCCCCCcccccCCchhhhhhccCCCCCCCCCCCccccccCCCCCCCCCCCC
Q 024432 21 SKSPLLLISSSLSSPKNPLSLSKPNPTHFPLTARPISTHYKPPMNILNKLGFGFRPSPDPASTENSAIAQGPDDDVPAPG 100 (268)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~m~~l~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 100 (268)
+.++|+.++|++..+...++||++.+++||+|+|+|+++.+|||.+++|+++++. ..++.-...-..++++.+.|.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mm~~~~k~~~~~~--~~alpgr~~h~v~g~~~~~p~~~ 93 (261)
T 2j89_A 16 TTTPLLLLSKPFLSPSAKSQLSHSKPFNFPRTLKPISYYKPPMANILSKLGFGTR--SPDPSTMDPTIPQGPDDDLPAPG 93 (261)
T ss_dssp -----------------------------------------------------------------CCTTTSCCCCCCSTT
T ss_pred CCccceeeccccccchhhhcccCCCccccCccCCceeeecchhhhhhccCCCCCh--hhcCCCcccccCCCCCCCCCCCC
Confidence 4557777899944455566999999999999999999988888899999998876 33221112334566666666578
Q ss_pred CeEEEEecCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHhcCCCC
Q 024432 101 QQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPT 180 (268)
Q Consensus 101 ~~~a~fAgGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~~hDPT 180 (268)
+++|+||||||||+|+.|++++||++|+|||+||+++||||++||+|+|||+|||+|+|||++|||++||++||++||||
T Consensus 94 ~e~a~fAgGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~~hDPT 173 (261)
T 2j89_A 94 QQFAQFGAGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWARHDPT 173 (261)
T ss_dssp CEEEEEEESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHHHSCTT
T ss_pred CeEEEEecCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcceeeccCCHHHHHHHHHHHHHHHHhcCCceEEEEEeCCCcccCchhHHHHHHhCCCCCccccccCCC
Q 024432 181 MLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEKGC 260 (268)
Q Consensus 181 ~~nrQG~D~G~QYRSaIfy~deeQ~~~A~~s~~~lq~~~~~~IvTeI~p~~~Fy~AEeYHQ~Yl~Knp~~g~~~s~~kg~ 260 (268)
+.||||+|+|+||||+|||+|++|+++|++++++++++++++|+|||+|+.+||+||||||+||+|||++||.||++|||
T Consensus 174 ~~nrQG~D~GtQYRSaIfy~~eeQ~~~Ae~s~~~~q~~~~~~IvTEI~p~~~Fy~AEdYHQ~Yl~Kn~~~gy~qsa~kgC 253 (261)
T 2j89_A 174 TLNRQGNDVGTQYRSGIYYYTPEQEKAAKESLERQQKLLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFMQSAEKGC 253 (261)
T ss_dssp STTEETTEESGGGCEEEEESSHHHHHHHHHHHHHHHTTCSSCCCCEEEECCCEEECCGGGTTTTTTTTTTSCCCCCCTTC
T ss_pred ccCCCCCCCCccccccccCCCHHHHHHHHHHHHHHHHhcCCCcEEEEecCCCeeECHHHHHHHHHHCCCCCCcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeC
Q 024432 261 NDPIRCYG 268 (268)
Q Consensus 261 ~~~ircyg 268 (268)
+|||||||
T Consensus 254 ~~~ir~~g 261 (261)
T 2j89_A 254 NDPIRCYG 261 (261)
T ss_dssp CSCCCSCC
T ss_pred CCchhhcC
Confidence 99999998
No 2
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=100.00 E-value=2.2e-74 Score=512.49 Aligned_cols=166 Identities=50% Similarity=0.818 Sum_probs=160.9
Q ss_pred CCCeEEEEecCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHhcCC
Q 024432 99 PGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHD 178 (268)
Q Consensus 99 ~~~~~a~fAgGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~~hD 178 (268)
.++++|+||||||||+|+.|++++||++|+|||+||+++||||++||+|.|||+|+|+|+|||++|||++||++||++||
T Consensus 40 ~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~~hD 119 (211)
T 1ff3_A 40 DGMEIAIFAMGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHD 119 (211)
T ss_dssp TTCEEEEEECSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHSSC
T ss_pred CCceEEEEecCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHHhcC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcceeeccCCHHHHHHHHHHHHHHHHh-----cCCceEEEEEeCCCcccCchhHHHHHHhCCCCCcc
Q 024432 179 PTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKV-----LNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFK 253 (268)
Q Consensus 179 PT~~nrQG~D~G~QYRSaIfy~deeQ~~~A~~s~~~lq~~-----~~~~IvTeI~p~~~Fy~AEeYHQ~Yl~Knp~~g~~ 253 (268)
||+.||||+|+|+||||+|||+|++|+++|++++++++++ ++++|+|||+|+.+||+||+|||+||+|||. |||
T Consensus 120 PT~~nrQG~D~GtQYRSaIf~~~~eQ~~~A~~~~~~~q~~l~~~g~~~~IvTeI~p~~~Fy~AE~YHQ~Yl~knP~-~Yc 198 (211)
T 1ff3_A 120 PAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQYLHKNPY-GYC 198 (211)
T ss_dssp TTSSSEETTEESGGGCCEECCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEECCCCCEEECCGGGTTHHHHSCC-CCC
T ss_pred CcccCCCCCCcCccceeeeecCCHHHHHHHHHHHHHHHHHHhhcccCCceEEEEeeCCCceeChHHHHHHHHHCCC-CCc
Confidence 9999999999999999999999999999999999988875 3578999999999999999999999999997 899
Q ss_pred ccccCCCCCcce
Q 024432 254 QSTEKGCNDPIR 265 (268)
Q Consensus 254 ~s~~kg~~~~ir 265 (268)
+....|+.+||+
T Consensus 199 ~~~~~gv~~p~~ 210 (211)
T 1ff3_A 199 GIGGIGVCLPPE 210 (211)
T ss_dssp CCCCCSCCCCCC
T ss_pred CcCCCeeeCCCC
Confidence 999999999997
No 3
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=100.00 E-value=1.3e-72 Score=497.35 Aligned_cols=155 Identities=51% Similarity=0.877 Sum_probs=148.6
Q ss_pred CCCeEEEEecCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHhcCC
Q 024432 99 PGQQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHD 178 (268)
Q Consensus 99 ~~~~~a~fAgGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~~hD 178 (268)
.++++|+||||||||+|+.|++++||++|+|||+||+++||||++||+|.|||+|+|+|+|||++|||++||++||++||
T Consensus 41 ~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~~hD 120 (199)
T 1fvg_A 41 EGTQMAVFGMGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWENHD 120 (199)
T ss_dssp TTCEEEEEEESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHTSC
T ss_pred CCceEEEEecCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHHhcC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcceeeccCCHHHHHHHHHHHHHHHHhcC----CceEEEEEeCCCcccCchhHHHHHHhCCCCCccc
Q 024432 179 PTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLN----RKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQ 254 (268)
Q Consensus 179 PT~~nrQG~D~G~QYRSaIfy~deeQ~~~A~~s~~~lq~~~~----~~IvTeI~p~~~Fy~AEeYHQ~Yl~Knp~~g~~~ 254 (268)
||+.||||+|+|+||||+|||+|++|+++|+++++++++++. ++|+|||+|+++||+||+|||+||+|||. |||+
T Consensus 121 PT~~nrQG~D~G~QYRS~If~~~~~Q~~~A~~~~~~~q~~~~~~g~~~IvTeI~p~~~Fy~AE~yHQ~Yl~knP~-~Yc~ 199 (199)
T 1fvg_A 121 PTQGMRQGNDHGSQYRSAIYPTSAEHVGAALKSKEDYQKVLSEHGFGLITTDIREGQTFYYAEDYHQQYLSKDPD-GYCG 199 (199)
T ss_dssp TTCSSEETTEESGGGCEEECCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCCEECSSCCCEECCGGGTTHHHHSTT-CCC-
T ss_pred CcccCCCCCCCChhheeccccCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeeCCCeeECHHHHHHHHHhCCC-CCCC
Confidence 999999999999999999999999999999999999887653 48999999999999999999999999996 7874
No 4
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=100.00 E-value=1.1e-72 Score=496.09 Aligned_cols=157 Identities=44% Similarity=0.782 Sum_probs=150.3
Q ss_pred CeEEEEecCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHhcCCCC
Q 024432 101 QQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPT 180 (268)
Q Consensus 101 ~~~a~fAgGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~~hDPT 180 (268)
+++|+||||||||+|+.|++++||++|+|||+||+++||||++||+|.|||+|+|+|+|||++|||++||++||++||||
T Consensus 2 ~~~a~fagGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~~hDPT 81 (193)
T 3bqh_A 2 TRTIYLAGGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDPT 81 (193)
T ss_dssp EEEEEEEESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHHHSCCB
T ss_pred ccEEEEecCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHHhcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcceeeccCCHHHHHHHHHHHHHHHHhcCCceEEEEEeCCCcccCchhHHHHHHhCCCCCccccccC
Q 024432 181 MLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEK 258 (268)
Q Consensus 181 ~~nrQG~D~G~QYRSaIfy~deeQ~~~A~~s~~~lq~~~~~~IvTeI~p~~~Fy~AEeYHQ~Yl~Knp~~g~~~s~~k 258 (268)
++||||+|+|+||||+|||+|++|+++|+++++++++.++++|+|||+|+.+||+||+|||+||+|||. |||+-.-+
T Consensus 82 ~~nrQG~D~G~QYRS~If~~~~~Q~~~A~~~~~~~~~~~~~~IvTeI~p~~~Fy~AE~yHQ~Yl~knp~-~Yc~~~~~ 158 (193)
T 3bqh_A 82 SLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAEEYHQDYLIKNPN-GYCHIDIR 158 (193)
T ss_dssp GGGSSSCCTTCTTCEEEEESSHHHHHHHHHHHHHHHTTCSSCBCCEEEECCCEEECCGGGTTHHHHCTT-CCC---CC
T ss_pred CCCCCCCCcCccceeeeecCCHHHHHHHHHHHHHHHHHhCCCeEEEEecCCCeeEcHHHHHHHHHhCCC-Cceeeecc
Confidence 999999999999999999999999999999999999999999999999999999999999999999995 89865433
No 5
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=100.00 E-value=1e-72 Score=494.12 Aligned_cols=155 Identities=39% Similarity=0.701 Sum_probs=141.5
Q ss_pred CCCeEEEEecCcchhhhhhhhcC--CCeeEeeeeeeCC--CCCC----CCccccccCCCCceEEEEEEEcCCCCCHHHHH
Q 024432 99 PGQQFSQFGAGCFWGVELAFQRV--PGVTKTEVGYSQG--YLHN----PSYEDVCSGTTNHNEVVRVQYDPKECSFDTLL 170 (268)
Q Consensus 99 ~~~~~a~fAgGCFWgvEa~F~~l--~GVv~t~vGYaGG--~~~n----PTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL 170 (268)
.++++|+||||||||+|+.|+++ +||++|+|||+|| +++| |||++||+|+|||+|+|+|+|||++|||++||
T Consensus 17 ~~~~~a~fagGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~LL 96 (187)
T 3pim_A 17 AKDKLITLACGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLRELT 96 (187)
T ss_dssp TTCEEEEEESSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHHHH
T ss_pred CCCcEEEEecCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHHHH
Confidence 46899999999999999999999 9999999999999 9999 99999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCCCCCCcceeeccCCHHHHHHHHHHHHHHHHhcCCceEEEEEeCCCcccCchhHHHHHHhCCCC
Q 024432 171 DMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRF 250 (268)
Q Consensus 171 ~~F~~~hDPT~~nrQG~D~G~QYRSaIfy~deeQ~~~A~~s~~~lq~~~~~~IvTeI~p~~~Fy~AEeYHQ~Yl~Knp~~ 250 (268)
++||++||||++||||+|+|+||||+|||+|++|+++|++++++++++++++|+|||+|+++||+||+|||+||+|||.
T Consensus 97 ~~Ff~~hDPT~~nrQG~D~G~QYRS~Ify~~~~Q~~~A~~~~~~l~~~~~~~IvTeI~p~~~Fy~AE~yHQ~Yl~knP~- 175 (187)
T 3pim_A 97 DFFFRIHDPTTSNSQGPDKGTQYRSGLFAHSDADLKELAKIKEEWQPKWGNKIATVIEPIKNFYDAEEYHQLYLDKNPQ- 175 (187)
T ss_dssp HHHTTSSCCBTTCC-----CGGGCCEEEESSHHHHHHHHHHHHHHGGGGTTCBCCEEEEEEEEEEHHHHHHHHCTTCTT-
T ss_pred HHHHHhcCCCcCCCCCCCcCcccceeeEeCCHHHHHHHHHHHHHHHHHhCCCcEEEEeeCCCeeecHHHHHHHHHHCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred Cccc
Q 024432 251 GFKQ 254 (268)
Q Consensus 251 g~~~ 254 (268)
|||.
T Consensus 176 ~Ycc 179 (187)
T 3pim_A 176 GYAC 179 (187)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 7774
No 6
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.4e-70 Score=468.68 Aligned_cols=157 Identities=34% Similarity=0.656 Sum_probs=148.1
Q ss_pred CeEEEEecCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHhcCCCC
Q 024432 101 QQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPT 180 (268)
Q Consensus 101 ~~~a~fAgGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~~hDPT 180 (268)
.++|+||||||||+|+.|++++||++|+|||+||+++||||++||+ |+|+|+|+|||++|||++||++||++||||
T Consensus 2 te~A~fagGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~----HaE~V~V~yDp~~isy~~LL~~F~~~hDPT 77 (168)
T 4gwb_A 2 TKRAVLAGGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGT----HAEGIEIIFDPERISYRRILELFFQIHDPT 77 (168)
T ss_dssp CEEEEEEESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTT----CEEEEEEEECTTTCCHHHHHHHHHHHSCTT
T ss_pred ceEEEEEccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCc----eEEEEEEEECCCCCCHHHHHHHHHhhcCCc
Confidence 3789999999999999999999999999999999999999999984 999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcceeeccCCHHHHHHHHHHHHHHHHh--cCCceEEEEEeCCCcccCchhHHHHHHhCCCCCccccccC
Q 024432 181 MLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKV--LNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEK 258 (268)
Q Consensus 181 ~~nrQG~D~G~QYRSaIfy~deeQ~~~A~~s~~~lq~~--~~~~IvTeI~p~~~Fy~AEeYHQ~Yl~Knp~~g~~~s~~k 258 (268)
++||||+|+|+||||+|||+|++|+++|+++++++++. ++++|+|||+|+++||+||+|||+||+|||+..||+-...
T Consensus 78 ~~nrQg~D~G~QYRS~If~~~~~Q~~~a~~~~~~l~~~~~~~~~IvTei~p~~~Fy~AE~yHQ~Yl~knP~~y~Ch~~~~ 157 (168)
T 4gwb_A 78 TKDRQGNDIGTSYRSAIYYVDDEQKRIAQETIADVEASGLWPGKVVTEVEPVRDFWEAEPEHQNYLERYPNGYTCHFPRP 157 (168)
T ss_dssp STTEETTEESGGGCEEEEESSHHHHHHHHHHHHHHHHHTCSSSCCCCEEEECCCEEECCGGGTTHHHHSTTSCCCCCCCT
T ss_pred CcCCCCCCCCcCceEEEecCCHHHHHHHHHHHHHHHHcccCCCCEEEEEEecCCeeECHHHHHHHHHhCCCCCccCcCCc
Confidence 99999999999999999999999999999999998875 6789999999999999999999999999998767876554
Q ss_pred CCC
Q 024432 259 GCN 261 (268)
Q Consensus 259 g~~ 261 (268)
...
T Consensus 158 ~~~ 160 (168)
T 4gwb_A 158 NWV 160 (168)
T ss_dssp TSC
T ss_pred ccc
Confidence 443
No 7
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=100.00 E-value=4.7e-67 Score=463.09 Aligned_cols=149 Identities=39% Similarity=0.736 Sum_probs=143.6
Q ss_pred CeEEEEecCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHhcCCCC
Q 024432 101 QQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPT 180 (268)
Q Consensus 101 ~~~a~fAgGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~~hDPT 180 (268)
.++|+||||||||+|+.|++++||++|+|||+||.++||||++ +|+ |+|+|+|+|||++|||++||++||++||||
T Consensus 25 ~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~--~G~--HaEaV~V~yDp~~iSy~~LL~~Ff~~hDPT 100 (203)
T 1nwa_A 25 NQKAILAGGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRN--HGT--HAEAVEIIFDPTVTDYRTLLEFFFQIHDPT 100 (203)
T ss_dssp CEEEEEEESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSC--CTT--CEEEEEEEECTTTCCHHHHHHHHHHHSCTT
T ss_pred cceEEEecCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhh--cCC--ceEEEEEEECCCcCCHHHHHHHHHHhcCCc
Confidence 5789999999999999999999999999999999999999999 665 999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcceeeccCCHHHHHHHHHHHHHHHHh--cCCceEEEEEeCCCcccCchhHHHHHHhCCCCCc-cc
Q 024432 181 MLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKV--LNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGF-KQ 254 (268)
Q Consensus 181 ~~nrQG~D~G~QYRSaIfy~deeQ~~~A~~s~~~lq~~--~~~~IvTeI~p~~~Fy~AEeYHQ~Yl~Knp~~g~-~~ 254 (268)
++||||+|+|+||||+|||+|++|+++|++++++++++ ++++|+|||+|+++||+||+|||+||+|||.. | |+
T Consensus 101 ~~nrQG~D~GtQYRSaIfy~~~eQ~~~A~~~~~~lq~~g~~~~~IvTeI~p~~~Fy~AE~YHQ~Yl~knP~~-Y~c~ 176 (203)
T 1nwa_A 101 TKDRQGNDRGTSYRSAIFYFDEQQKRIALDTIADVEASGLWPGKVVTEVSPAGDFWEAEPEHQDYLQRYPNG-YTCH 176 (203)
T ss_dssp STTEETTEESGGGCEEEEESSHHHHHHHHHHHHHHHHHCCSSSCCCCEEEECCCEEECCGGGTTHHHHSTTS-CCCC
T ss_pred ccCCCCCCCCccccccccCCCHHHHHHHHHHHHHHHHhcCcCCCeEEEEecCCCEEEChHHHHHHHHhCCCC-Cccc
Confidence 99999999999999999999999999999999999987 78899999999999999999999999999974 6 54
No 8
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=100.00 E-value=2.9e-67 Score=488.92 Aligned_cols=155 Identities=37% Similarity=0.661 Sum_probs=150.1
Q ss_pred CeEEEEecCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHhcCCCC
Q 024432 101 QQFSQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPT 180 (268)
Q Consensus 101 ~~~a~fAgGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~~hDPT 180 (268)
+++|+||||||||+|+.|++++||++|+|||+||+++||||++|| .|||+|||+|+|||++|||++||++||++||||
T Consensus 2 ~~~a~fagGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc--~TGHaEaV~V~yDp~~isy~~LL~~f~~~hDPT 79 (313)
T 3e0m_A 2 MAEIYLAGGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLK--ETDHAETVQVIYDEKEVSLREILLYYFRVIDPL 79 (313)
T ss_dssp CEEEEEECSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHH--HHTCEEEEEEEECTTTSCHHHHHHHHHHHSCTT
T ss_pred ccEEEEecCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhc--cCCCeEEEEEEECCCcCCHHHHHHHHHhhcCCC
Confidence 578999999999999999999999999999999999999999999 799999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcceeeccCCHHHHHHHHHHHHHHHHhcCCceEEEEEeCCCcccCchhHHHHHHhCCCCCccccccC
Q 024432 181 MLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSTEK 258 (268)
Q Consensus 181 ~~nrQG~D~G~QYRSaIfy~deeQ~~~A~~s~~~lq~~~~~~IvTeI~p~~~Fy~AEeYHQ~Yl~Knp~~g~~~s~~k 258 (268)
+.||||+|+|+||||+|||+|++|+++|++++++++++++++|+|||+|+++||+||+|||+||+|||. |||+-..+
T Consensus 80 ~~nrQG~D~G~QYRS~Ify~~~~Q~~~a~~~~~~~~~~~~~~IvTeI~p~~~Fy~AE~yHQ~Yl~knP~-~Yc~~~~~ 156 (313)
T 3e0m_A 80 SINQQGNDRGRQYRTGIYYQDEADLPAIYTVVQEQERMLGRKIAVEVEQLRHYILAEDYHQDYLRKNPS-GYCHIDVT 156 (313)
T ss_dssp CSSEETTEESGGGCCEEEESCGGGHHHHHHHHHHHHHHHSSCCCCEEEECCCEEECCGGGTTHHHHSTT-CCCCSCGG
T ss_pred cCCCcCCCCccccceeEecCCHHHHHHHHHHHHHHHHhcCCCeEEEEeeccceeEcHHHHHHHHHHCCC-cceeeecc
Confidence 999999999999999999999999999999999999999999999999999999999999999999996 99865433
No 9
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=95.87 E-value=0.0089 Score=41.33 Aligned_cols=47 Identities=30% Similarity=0.381 Sum_probs=40.5
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
++|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|++..
T Consensus 14 ~~C~~~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 60 (74)
T 3dxs_X 14 AACSNSVEAALMNVNGVFKASVALLQN-------------------RADVVFDPNLVKEEDIKEEI 60 (74)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEGGGT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999999877543 36799999999999998875
No 10
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=95.32 E-value=0.029 Score=36.83 Aligned_cols=47 Identities=21% Similarity=0.342 Sum_probs=39.4
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 58 (68)
T 1cpz_A 12 NHCVARIEEAVGRISGVKKVKVQLKKE-------------------KAVVKFDEANVQATEICQAI 58 (68)
T ss_dssp SSHHHHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999998876543 36689999999988888753
No 11
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=95.21 E-value=0.029 Score=37.33 Aligned_cols=47 Identities=26% Similarity=0.392 Sum_probs=39.4
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 61 (72)
T 1osd_A 15 SACPITVKKAISKVEGVSKVDVTFETR-------------------QAVVTFDDAKTSVQKLTKAT 61 (72)
T ss_dssp TTHHHHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEEETTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999988876533 36789999999988888764
No 12
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=95.10 E-value=0.021 Score=38.10 Aligned_cols=47 Identities=19% Similarity=0.436 Sum_probs=39.0
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 17 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 63 (71)
T 2l3m_A 17 GHCVNAIESSVKELNGVEQVKVQLAEG-------------------TVEVTIDSSVVTLKDIVAVI 63 (71)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 468999999999999999998876543 36789999999988888753
No 13
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=95.09 E-value=0.022 Score=44.08 Aligned_cols=48 Identities=29% Similarity=0.511 Sum_probs=41.1
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFW 174 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~ 174 (268)
++|-|.+|..+.+++||.++.+-++.+ .+.|.|||..++.++|++..=
T Consensus 86 ~~C~~~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i~ 133 (151)
T 1p6t_A 86 AACANRIEKRLNKIEGVANAPVNFALE-------------------TVTVEYNPKEASVSDLKEAVD 133 (151)
T ss_dssp SSHHHHHHHHHTTSSSEEECCEETTTT-------------------EEEEEECTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEEccCC-------------------EEEEEECCCCCCHHHHHHHHH
Confidence 589999999999999999998876543 377999999999999988753
No 14
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=94.79 E-value=0.048 Score=35.65 Aligned_cols=46 Identities=35% Similarity=0.540 Sum_probs=37.8
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDM 172 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~ 172 (268)
.+|-|.+|..+.+++||.+..+-+..+ .+.|.||+..++.++|.+.
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~ 60 (71)
T 2ldi_A 15 AACASSIERALERLKGVAEASVTVATG-------------------RLTVTYDPKQVSEITIQER 60 (71)
T ss_dssp SGGGHHHHTGGGGCSSEEEEEEETTTT-------------------EEEEEECTTTCCTHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC-------------------EEEEEECCCCCCHHHHHHH
Confidence 579999999999999999988776543 3568899988888887765
No 15
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=94.68 E-value=0.054 Score=36.14 Aligned_cols=47 Identities=32% Similarity=0.558 Sum_probs=38.9
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-+.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 18 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 64 (76)
T 1opz_A 18 AACAARIEKGLKRMPGVTDANVNLATE-------------------TVNVIYDPAETGTAAIQEKI 64 (76)
T ss_dssp TTHHHHHHHHHHTSTTEEEEEEEGGGT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999988876543 36689999999988887754
No 16
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=94.65 E-value=0.037 Score=35.76 Aligned_cols=46 Identities=26% Similarity=0.447 Sum_probs=37.7
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDM 172 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~ 172 (268)
.+|-+.+|..+.+++||.+..+-+..+ .+.|.||+..++.++|.+.
T Consensus 14 ~~c~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~ 59 (69)
T 2qif_A 14 QHCVKAVETSVGELDGVSAVHVNLEAG-------------------KVDVSFDADKVSVKDIADA 59 (69)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC-------------------EEEEEECCCCCCHHHHHHH
Confidence 478999999999999999888765433 3568999999998888765
No 17
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=94.38 E-value=0.079 Score=37.40 Aligned_cols=47 Identities=17% Similarity=0.333 Sum_probs=39.2
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 21 ~~C~~~ie~~l~~~~GV~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 67 (84)
T 1q8l_A 21 HSCTSTIEGKIGKLQGVQRIKVSLDNQ-------------------EATIVYQPHLISVEEMKKQI 67 (84)
T ss_dssp CSSCHHHHHHHHTCTTEEEEEECSTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 479999999999999999988865433 36789999999988888764
No 18
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=94.36 E-value=0.05 Score=36.48 Aligned_cols=47 Identities=17% Similarity=0.393 Sum_probs=38.4
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 16 ~~c~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 62 (75)
T 1yjr_A 16 ASCVHKIESSLTKHRGILYCSVALATN-------------------KAHIKYDPEIIGPRDIIHTI 62 (75)
T ss_dssp TTHHHHHHHHHTTSTTEEEEEEETTTT-------------------EEEEEECTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999988866433 36789999988888777653
No 19
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=94.36 E-value=0.047 Score=36.94 Aligned_cols=47 Identities=28% Similarity=0.522 Sum_probs=39.2
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 14 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 60 (75)
T 3cjk_B 14 NSCVWTIEQQIGKVNGVHHIKVSLEEK-------------------NATIIYDPKLQTPKTLQEAI 60 (75)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 469999999999999999988876543 36789999999988888764
No 20
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=94.33 E-value=0.051 Score=37.19 Aligned_cols=47 Identities=21% Similarity=0.388 Sum_probs=38.5
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
++|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 61 (77)
T 1y3j_A 15 ASCVANIERNLRREEGIYSILVALMAG-------------------KAEVRYNPAVIQPPMIAEFI 61 (77)
T ss_dssp CSHHHHHHHHHTTSSSEEECCCBTTTT-------------------BEEEEECTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999887765433 36689999999988888764
No 21
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=94.30 E-value=0.054 Score=37.12 Aligned_cols=47 Identities=28% Similarity=0.522 Sum_probs=39.2
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 20 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 66 (79)
T 1kvi_A 20 NSCVWTIEQQIGKVNGVHHIKVSLEEK-------------------NATIIYDPKLQTPKTLQEAI 66 (79)
T ss_dssp TTTHHHHHHHHHHSSSCCCEEEEGGGT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 479999999999999999888876543 36789999999988887764
No 22
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=94.29 E-value=0.033 Score=40.54 Aligned_cols=47 Identities=15% Similarity=0.236 Sum_probs=39.6
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
++|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~Ie~~L~~~~GV~~v~v~l~~~-------------------~~~V~~~~~~~~~~~i~~~i 61 (90)
T 2g9o_A 15 KSCVSNIESTLSALQYVSSIVVSLENR-------------------SAIVVYNASSVTPESLRKAI 61 (90)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEETTTT-------------------EEEEEECCSSCCTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEEccCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 479999999999999999999876533 37789999999988888764
No 23
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=94.13 E-value=0.036 Score=36.86 Aligned_cols=47 Identities=28% Similarity=0.409 Sum_probs=38.7
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 61 (72)
T 1aw0_A 15 NSCVQSIEGVISKKPGVKSIRVSLANS-------------------NGTVEYDPLLTSPETLRGAI 61 (72)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC-------------------EEEEEECCCcCCHHHHHHHH
Confidence 468999999999999999888876543 36789999999988887754
No 24
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=93.96 E-value=0.075 Score=40.39 Aligned_cols=47 Identities=30% Similarity=0.498 Sum_probs=40.1
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-|-+|..+.+++||.++.+-+..+ .+.|.||+..++.++|++..
T Consensus 20 ~~Ca~~Ie~~L~~~~GV~~v~v~~~~~-------------------~~~V~~~~~~~~~~~i~~~i 66 (111)
T 2ofg_X 20 TSCKLKIEGSLERLKGVAEASVTVATG-------------------RLTVTYDPKQVSEITIQERI 66 (111)
T ss_dssp GGTHHHHHHHHTTSSSEEEEEEETTTT-------------------EEEEEECTTTCSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEECCCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 589999999999999999999876543 36789999999998888764
No 25
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=93.95 E-value=0.031 Score=42.92 Aligned_cols=47 Identities=21% Similarity=0.441 Sum_probs=40.0
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
++|-|.+|..+.+++||.++.+-+..+ .+.|.|||..++.++|++..
T Consensus 92 ~~C~~~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 138 (149)
T 2ew9_A 92 ASCVHNIESKLTRTNGITYASVALATS-------------------KALVKFDPEIIGPRDIIKII 138 (149)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEEETTTT-------------------EEEEECCTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEcCCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 478999999999999999998877543 37789999999999988764
No 26
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=93.83 E-value=0.057 Score=35.66 Aligned_cols=46 Identities=28% Similarity=0.449 Sum_probs=34.9
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-+.+|..+.+++||.++.+-+..+ .+.|.||+. ++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~-~~~~~i~~~i 60 (71)
T 2xmw_A 15 AACASSIERAIAKVPGVQSCQVNFALE-------------------QAVVSYHGE-TTPQILTDAV 60 (71)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEEC----CHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC-------------------EEEEEECCC-CCHHHHHHHH
Confidence 478999999999999999998876543 366889987 8888887753
No 27
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=93.51 E-value=0.083 Score=35.66 Aligned_cols=46 Identities=28% Similarity=0.445 Sum_probs=38.6
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
++|-|-+|..+.+++||.++.+-+..+ .+.|.| +..++.++|++..
T Consensus 14 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~-~~~~~~~~i~~~i 59 (69)
T 4a4j_A 14 TSCASSIERAIAKVPGVQSCQVNFALE-------------------QAVVSY-HGETTPQILTDAV 59 (69)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEE-CTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEE-CCCCCHHHHHHHH
Confidence 479999999999999999999876543 367889 7889999998865
No 28
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=93.08 E-value=0.1 Score=34.52 Aligned_cols=46 Identities=30% Similarity=0.472 Sum_probs=37.2
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
++|-+.+|..+.+++||.++.+-+..+ .+.|.||+. ++.++|++..
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~-~~~~~i~~~i 57 (69)
T 2kt2_A 12 DSCAAHVKEALEKVPGVQSALVSYPKG-------------------TAQLAIVPG-TSPDALTAAV 57 (69)
T ss_dssp THHHHHHHHHHHHSTTEEEEEEETTTT-------------------EEEEEECTT-SCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEEccCC-------------------EEEEEECCC-CCHHHHHHHH
Confidence 478999999999999999998876543 356889987 6888887764
No 29
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=92.97 E-value=0.14 Score=33.21 Aligned_cols=46 Identities=20% Similarity=0.317 Sum_probs=36.4
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
++|-|.+|..+.+++||.+..+-+..+ .+.|.||+.. +.++|.+..
T Consensus 13 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~-~~~~i~~~i 58 (66)
T 1yg0_A 13 NHCVDKIEKFVGEIEGVSFIDVSVEKK-------------------SVVVEFDAPA-TQDLIKEAL 58 (66)
T ss_dssp SHHHHHHHHHHTTSSSEEEEEEETTTT-------------------EEEEEECTTC-CHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEEcCCC-------------------EEEEEECCCC-CHHHHHHHH
Confidence 579999999999999999988866433 3568899875 777777653
No 30
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=92.41 E-value=0.1 Score=35.38 Aligned_cols=47 Identities=30% Similarity=0.558 Sum_probs=37.6
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-+.+|..+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 61 (80)
T 1jww_A 15 AACANRIEKRLNKIEGVANAPVNFALE-------------------TVTVEYNPKEASVSDLKEAV 61 (80)
T ss_dssp HHHHHHHHHHHHTSTTEEECCCCSSSS-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 468999999999999998877655433 36689999999988887754
No 31
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=90.96 E-value=0.23 Score=40.95 Aligned_cols=47 Identities=26% Similarity=0.445 Sum_probs=39.9
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
++|-|.+|..+.+++||.++.+-+..+ .+.|.||+..++.++|++..
T Consensus 134 ~~C~~~ie~~l~~~~GV~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 180 (202)
T 2rop_A 134 ASCVHSIEGMISQLEGVQQISVSLAEG-------------------TATVLYNPAVISPEELRAAI 180 (202)
T ss_dssp THHHHHHHHHGGGSSSEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEccCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 479999999999999999999876543 36789999999999888764
No 32
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=90.84 E-value=0.37 Score=34.81 Aligned_cols=47 Identities=17% Similarity=0.002 Sum_probs=38.5
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-+.+|..+.+++||.++.+-+..+ .+.|.||+..++-++|.+..
T Consensus 28 ~~C~~~ie~~l~~~~GV~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 74 (95)
T 2kkh_A 28 TSEVPIIENILKSLDGVKEYSVIVPSR-------------------TVIVVHDSLLISPFQIAKAL 74 (95)
T ss_dssp TTTHHHHHHHHHHSSSEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEccCC-------------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999988866433 36688999888888887764
No 33
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=90.78 E-value=0.19 Score=33.21 Aligned_cols=46 Identities=22% Similarity=0.478 Sum_probs=36.4
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+|-+.+|..+.+++||.++.+-+..+ .+.|.|| ..++.++|.+..
T Consensus 14 ~~c~~~i~~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~-~~~~~~~i~~~i 59 (72)
T 1fvq_A 14 SACTNTINTQLRALKGVTKCDISLVTN-------------------ECQVTYD-NEVTADSIKEII 59 (72)
T ss_dssp HHHHHHHHHHHHTSSSEEEECCBTTTT-------------------EEEEEEC-TTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEEC-CCCCHHHHHHHH
Confidence 468999999999999999887755433 3668899 788888887763
No 34
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=90.01 E-value=0.45 Score=31.94 Aligned_cols=44 Identities=23% Similarity=0.283 Sum_probs=34.2
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDM 172 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~ 172 (268)
++|-|.+|..+.+++||.++.+-+..+ .+.|.||+. ..++|.+.
T Consensus 15 ~~C~~~ie~~l~~~~gV~~~~v~~~~~-------------------~~~v~~~~~--~~~~i~~~ 58 (73)
T 1mwy_A 15 AACARKVENAVRQLAGVNQVQVLFATE-------------------KLVVDADND--IRAQVESA 58 (73)
T ss_dssp TTHHHHHHHHHHTSSSEEEEEEETTTT-------------------EEEEEESSC--CHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC-------------------EEEEEECCC--CHHHHHHH
Confidence 579999999999999999998876543 356889984 35666554
No 35
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=88.88 E-value=0.5 Score=38.91 Aligned_cols=46 Identities=24% Similarity=0.374 Sum_probs=38.3
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDM 172 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~ 172 (268)
++|-|.+|..+.+++||.++.|-+..+ .+.|.||+..++.++|.+.
T Consensus 32 ~~C~~~ie~~l~~~~GV~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~ 77 (202)
T 2rop_A 32 KSCVLNIEENIGQLLGVQSIQVSLENK-------------------TAQVKYDPSCTSPVALQRA 77 (202)
T ss_dssp STHHHHHHHHTTSBTTEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC-------------------EEEEEECCCCCCHHHHHHH
Confidence 579999999999999999998876543 3668899998998887765
No 36
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=87.13 E-value=0.6 Score=35.53 Aligned_cols=47 Identities=23% Similarity=0.395 Sum_probs=37.8
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
+||-|.+|..+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 16 ~~C~~~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 62 (149)
T 2ew9_A 16 ASCVSNIERNLQKEAGVLSVLVALMAG-------------------KAEIKYDPEVIQPLEIAQFI 62 (149)
T ss_dssp SSHHHHHHHHHHTTSSCCCEEEETTTT-------------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecCC-------------------EEEEEEcCCCCCHHHHHHHH
Confidence 589999999999999999888765433 36688999989888776653
No 37
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=83.42 E-value=0.8 Score=46.11 Aligned_cols=49 Identities=22% Similarity=0.378 Sum_probs=42.2
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHh
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWA 175 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~ 175 (268)
++|-|.+|+.+.+++||.++.+-++.+ .+.|+||+..++.++|.+..=.
T Consensus 14 a~Ca~~Ie~~L~~~~GV~~v~Vnl~~~-------------------~~~V~~d~~~~~~~~i~~ai~~ 62 (723)
T 3j09_A 14 AMCVKSIETAVGSLEGVEEVRVNLATE-------------------TAFIRFDEKRIDFETIKRVIED 62 (723)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT-------------------EEEEEECTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCceEEEEEcCCC-------------------EEEEEeCCCcCCHHHHHHHHHh
Confidence 579999999999999999999987544 3679999999999999987654
No 38
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=80.56 E-value=0.94 Score=31.17 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=34.2
Q ss_pred ecCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 107 GAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 107 AgGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
-++|-|-+|..+.+ +||.++.+-+. ...+.|.|| +.++|.+..
T Consensus 16 C~~C~~~ie~~l~~-~gv~~~~v~~~-------------------~~~~~v~~~----~~~~i~~~i 58 (73)
T 3fry_A 16 CHHCVARVKKALEE-AGAKVEKVDLN-------------------EAVVAGNKE----DVDKYIKAV 58 (73)
T ss_dssp CGGGHHHHHHHHHH-TTCEEEEECSS-------------------EEEEEEEGG----GHHHHHHHH
T ss_pred CHHHHHHHHHHhcc-CCcEEEEEEcc-------------------CCEEEEEEC----CHHHHHHHH
Confidence 35799999999999 99999988654 345778898 777777665
No 39
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=79.50 E-value=1.8 Score=29.45 Aligned_cols=45 Identities=20% Similarity=0.387 Sum_probs=34.1
Q ss_pred ecCcchhhhhhhhcCC-CeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 107 GAGCFWGVELAFQRVP-GVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 107 AgGCFWgvEa~F~~l~-GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
-++|-|.+|..+.+++ ||.++.+-+..+. +.|.+ .++.++|++..
T Consensus 15 C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~-------------------~~v~~---~~~~~~i~~~i 60 (73)
T 1cc8_A 15 CSGCSGAVNKVLTKLEPDVSKIDISLEKQL-------------------VDVYT---TLPYDFILEKI 60 (73)
T ss_dssp SHHHHHHHHHHHHTTTTSEEEEEEETTTTE-------------------EEEEE---SSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCceEEEEECCCCE-------------------EEEEE---eCCHHHHHHHH
Confidence 3689999999999999 9999998775442 44555 36677777654
No 40
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=78.64 E-value=1.4 Score=29.97 Aligned_cols=44 Identities=30% Similarity=0.441 Sum_probs=34.1
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFW 174 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~ 174 (268)
++|-|-+|..+.+++|| ++.+-+..+ .+.|.| .++.++|++..-
T Consensus 13 ~~C~~~i~~~l~~~~gV-~v~v~~~~~-------------------~~~v~~---~~~~~~i~~~i~ 56 (68)
T 3iwl_A 13 GGCAEAVSRVLNKLGGV-KYDIDLPNK-------------------KVCIES---EHSMDTLLATLK 56 (68)
T ss_dssp HHHHHHHHHHHHHHCSE-EEEEETTTT-------------------EEEEEE---SSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCe-EEEEEcCCC-------------------EEEEEe---cCCHHHHHHHHH
Confidence 47899999999999999 999887644 245666 367888887763
No 41
>2kwa_A Kinase A inhibitor; bacterial signal transduction, KIPI, histidine kinase inhibi bacillus subtilis, transferase inhibitor; NMR {Bacillus subtilis}
Probab=75.46 E-value=1.1 Score=34.24 Aligned_cols=31 Identities=23% Similarity=0.411 Sum_probs=25.7
Q ss_pred CCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCC----------CHHHHHHH
Q 024432 121 VPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKEC----------SFDTLLDM 172 (268)
Q Consensus 121 l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~I----------Sye~LL~~ 172 (268)
++||++++.||. .|.|.|||.++ +++.|...
T Consensus 45 ~~Gv~EiVPa~~---------------------SllV~ydp~~i~~~~~~~~~~~~~~l~~~ 85 (101)
T 2kwa_A 45 FPGFIECIPAFT---------------------SLTVFYDMYEVYKHLPQGISSPFESVKRD 85 (101)
T ss_dssp CTTEEEEEECSS---------------------EEEEEECHHHHHTTCCTTCCSHHHHHHHH
T ss_pred CCCeEEeccCce---------------------EEEEEEcchHhcccccccccCCHHHHHHH
Confidence 789999999985 58899999888 67766654
No 42
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=72.30 E-value=4.4 Score=30.86 Aligned_cols=46 Identities=33% Similarity=0.563 Sum_probs=36.4
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDM 172 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~ 172 (268)
.+|-+.+|..+.+++||.+..+-+..+ .+.|.||+..++.++|.+.
T Consensus 18 ~~C~~~ie~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~ 63 (151)
T 1p6t_A 18 AACAARIEKGLKRMPGVTDANVNLATE-------------------TVNVIYDPAETGTAAIQEK 63 (151)
T ss_dssp SHHHHHHHHHHTTSSSEEEEEEEGGGT-------------------EEEEEECTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEccCC-------------------EEEEEEcCCcCCHHHHHHH
Confidence 578899999999999999888776533 2457899888888777654
No 43
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.06 E-value=3.5 Score=30.53 Aligned_cols=45 Identities=22% Similarity=0.288 Sum_probs=34.4
Q ss_pred ecCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 107 GAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 107 AgGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
-.+|-|.+|..+.+++||.++.+-+..+ .+.|.|+ ++.++|++..
T Consensus 29 C~~C~~~Ie~aL~~l~GV~~v~vdl~~~-------------------~~~V~~~---~~~~~i~~~i 73 (98)
T 2crl_A 29 CQSCVDAVRKSLQGVAGVQDVEVHLEDQ-------------------MVLVHTT---LPSQEVQALL 73 (98)
T ss_dssp SHHHHHHHHHTTTTCTTCCEEEEETTTT-------------------EEEEEES---SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCceEEEEECCCC-------------------EEEEEEe---CCHHHHHHHH
Confidence 4579999999999999999999876543 2456664 5677777765
No 44
>2phc_B Uncharacterized protein PH0987; structural genomics, southeas collaboratory for structural genomics, secsg, PSI, protein initiative; 2.29A {Pyrococcus horikoshii} SCOP: b.62.1.4 d.74.5.1
Probab=68.70 E-value=6.2 Score=34.81 Aligned_cols=39 Identities=21% Similarity=0.349 Sum_probs=30.0
Q ss_pred hhhhhhc--CCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 114 VELAFQR--VPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 114 vEa~F~~--l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
+.+.+++ ++||++++.||. .|.|.|||.++++++|++..
T Consensus 30 l~~~l~~~~~~gv~e~vP~~~---------------------sl~V~~dp~~~~~~~l~~~l 70 (225)
T 2phc_B 30 LAKAIEKESPEWLVELVPAYS---------------------SLLVIYDPLKASYEEVESYL 70 (225)
T ss_dssp HHHHHHHHCCTTEEEEEEETT---------------------EEEEEECTTTSCHHHHHHHH
T ss_pred HHHHHhccCCCCeEEeeccce---------------------EEEEEEcCCcCCHHHHHHHH
Confidence 3334444 799999999985 58899999999998776643
No 45
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=68.50 E-value=1.5 Score=28.94 Aligned_cols=41 Identities=24% Similarity=0.357 Sum_probs=31.4
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHH
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDM 172 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~ 172 (268)
++|-|.+|..+.++ ||.+..+-+..+ .+.|.||+. ++|.+.
T Consensus 13 ~~C~~~i~~~l~~~-gv~~~~v~~~~~-------------------~~~v~~~~~----~~i~~~ 53 (67)
T 2kyz_A 13 NHCKMRISKALEEL-GVKNYEVSVEEK-------------------KVVVETENL----DSVLKK 53 (67)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEEETTTT-------------------EEEEECSCH----HHHHHH
T ss_pred HHHHHHHHHHHHHc-CCeEEEEECCCC-------------------EEEEEECCH----HHHHHH
Confidence 47999999999999 999888876543 255788875 566554
No 46
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=67.82 E-value=4.2 Score=26.51 Aligned_cols=27 Identities=41% Similarity=0.728 Sum_probs=23.0
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCC
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQG 134 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG 134 (268)
++|-+.+|..+.+++||.+..+-+..+
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~ 38 (66)
T 2roe_A 12 NHCVMAVTKALKKVPGVEKVEVSLEKG 38 (66)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEECSSSC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 478999999999999999988866544
No 47
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=64.12 E-value=2.8 Score=30.24 Aligned_cols=27 Identities=7% Similarity=0.002 Sum_probs=23.3
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCC
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQG 134 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG 134 (268)
++|-|.+|..+.+++||.++.+-+..+
T Consensus 34 ~~C~~~Ie~aL~~~~GV~~v~v~l~~~ 60 (85)
T 2k2p_A 34 GHCAGVIKGAIEKTVPGAAVHADPASR 60 (85)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEETTTT
T ss_pred HHHHHHHHHHHhcCCCeeEEEEECCCC
Confidence 479999999999999999998876543
No 48
>1ans_A Neurotoxin III; NMR {Anemonia sulcata} SCOP: g.11.1.1
Probab=60.87 E-value=2.1 Score=26.45 Aligned_cols=6 Identities=67% Similarity=1.974 Sum_probs=5.6
Q ss_pred cCcchh
Q 024432 108 AGCFWG 113 (268)
Q Consensus 108 gGCFWg 113 (268)
+|||||
T Consensus 9 ~gCpWG 14 (27)
T 1ans_A 9 GGCPWG 14 (27)
T ss_dssp TTCSSS
T ss_pred cCCccc
Confidence 899998
No 49
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=54.47 E-value=23 Score=38.27 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=45.7
Q ss_pred hhhhhhhhc--CCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHh---cCCCCCCCCCC
Q 024432 112 WGVELAFQR--VPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWA---RHDPTMLNRQG 186 (268)
Q Consensus 112 WgvEa~F~~--l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~---~hDPT~~nrQG 186 (268)
|.+...+++ ++||++++.||. .+.|.|||.++++++|++..-. ...+....
T Consensus 866 ~al~~~l~~~~~~gv~e~vP~~~---------------------sl~v~~dp~~~~~~~l~~~l~~~~~~~~~~~~~--- 921 (1236)
T 3va7_A 866 NRLIHQVERHQTVGIVEMSQGVR---------------------SVLIEFDGSKINQKALLKCLIAYESEIQFDKNW--- 921 (1236)
T ss_dssp HHHHHHHHHHTCTTEEEEEECSS---------------------EEEEEECTTTSCHHHHHHHHHHHHTTCCCCTTC---
T ss_pred HHHHHHHhccCCCCeEEeeccce---------------------EEEEEECCCCCCHHHHHHHHHHHHhhccccccc---
Confidence 555555554 799999998874 3789999999999988876533 32221110
Q ss_pred CCCCCCcceeeccCCHHHHHH
Q 024432 187 NDVGTQYRSGIYFYTPEQEKA 207 (268)
Q Consensus 187 ~D~G~QYRSaIfy~deeQ~~~ 207 (268)
..-+...+-=+.|.++..++.
T Consensus 922 ~~~~r~v~iPv~y~~~~~~~~ 942 (1236)
T 3va7_A 922 NVKSKIFKLPMAFEDSKTLDC 942 (1236)
T ss_dssp EEEEEEEEEEEEETCHHHHHH
T ss_pred CCCCcEEEEeeEeCCcchhhH
Confidence 011344556677888754333
No 50
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=52.39 E-value=3.6 Score=27.23 Aligned_cols=25 Identities=24% Similarity=0.430 Sum_probs=21.8
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeee
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYS 132 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYa 132 (268)
++|-|.+|..+.+++||.++.+-+.
T Consensus 15 ~~C~~~ie~~l~~~~gv~~~~v~~~ 39 (71)
T 2aj0_A 15 TNCAAKFERNVKEIEGVTEAIVNFG 39 (71)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEECCS
T ss_pred HHHHHHHHHHHHcCCCeEEEEEECC
Confidence 4689999999999999999888664
No 51
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=50.01 E-value=2.6 Score=26.67 Aligned_cols=27 Identities=19% Similarity=0.193 Sum_probs=22.7
Q ss_pred cCcchhhhhhhhcCCCeeEeeeeeeCC
Q 024432 108 AGCFWGVELAFQRVPGVTKTEVGYSQG 134 (268)
Q Consensus 108 gGCFWgvEa~F~~l~GVv~t~vGYaGG 134 (268)
.+|-|.+|..+.+++||.+..+-+..+
T Consensus 13 ~~C~~~i~~~l~~~~gv~~~~v~~~~~ 39 (64)
T 2xmm_A 13 EACAEAVTKAVQNEDAQATVQVDLTSK 39 (64)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEECTTTC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 479999999999999999888766543
No 52
>3oep_A Putative uncharacterized protein TTHA0988; KIPI, KIPA, cyclophilin, allophanate hydrolase, structural G unknown function, NPPSFA; 1.75A {Thermus thermophilus} PDB: 3opf_A 3ore_A
Probab=49.09 E-value=35 Score=33.54 Aligned_cols=71 Identities=20% Similarity=0.306 Sum_probs=44.9
Q ss_pred hhhhhhhhc--CCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCCCCCCCC
Q 024432 112 WGVELAFQR--VPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDV 189 (268)
Q Consensus 112 WgvEa~F~~--l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~~hDPT~~nrQG~D~ 189 (268)
|.+.+.+++ ++||++++.+|. .|.|.|||.++++++|++..-..... . ...
T Consensus 22 ~al~~~L~~~~~~gv~e~vP~~~---------------------sllV~ydp~~~~~~~l~~~l~~~~~~--~----~~~ 74 (494)
T 3oep_A 22 LALAEALLRAPPPGLLDAVPAYG---------------------VLYLEYDPRRLSRGRLLRLLKGLPQE--R----AEE 74 (494)
T ss_dssp HHHHHHHHHSCCTTEEEEEEETT---------------------EEEEEECTTTSCHHHHHHHHHHCC------------
T ss_pred HHHHHHHhccCCCCcEEeecccc---------------------EEEEEecCCCCCHHHHHHHHHHhhhc--c----cCC
Confidence 444455544 689999998874 37899999999999999876543321 1 112
Q ss_pred CCCcceeeccCCHHHHHHHH
Q 024432 190 GTQYRSGIYFYTPEQEKAAK 209 (268)
Q Consensus 190 G~QYRSaIfy~deeQ~~~A~ 209 (268)
+...+-=+.|.+++=.++|+
T Consensus 75 ~r~v~IPV~Y~g~DL~~vA~ 94 (494)
T 3oep_A 75 GRVVEIPVRYDGEDLPEVAS 94 (494)
T ss_dssp -CEEEEEEECCCTTHHHHHH
T ss_pred CcEEEEEeecChHHHHHHHH
Confidence 34556667777764444443
No 53
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=36.50 E-value=38 Score=29.23 Aligned_cols=46 Identities=15% Similarity=0.378 Sum_probs=34.7
Q ss_pred ecCcchhhhhhhhcCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHH
Q 024432 107 GAGCFWGVELAFQRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFW 174 (268)
Q Consensus 107 AgGCFWgvEa~F~~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~ 174 (268)
-++|-|.+|..+.+++||.++.+-+..+ .+.|.+ .++.++|++..=
T Consensus 16 C~~Ca~~IekaL~~l~GV~~v~Vnl~~~-------------------~v~V~~---~~~~~~I~~aI~ 61 (222)
T 1qup_A 16 CENCVNDIKACLKNVPGINSLNFDIEQQ-------------------IMSVES---SVAPSTIINTLR 61 (222)
T ss_dssp STTHHHHHHHHHTTCTTEEEEEEETTTT-------------------EEEEEE---SSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCeeEEEEEcCCC-------------------EEEEec---cCCHHHHHHHHH
Confidence 3689999999999999999999877543 234554 367777777653
No 54
>3pvh_A UPF0603 protein AT1G54780, chloroplastic; TAP domain, rossman fold, acid phosphatase, arabidopsis THAL thylakoid lumen, hydrolase; 1.60A {Arabidopsis thaliana} PDB: 3pw9_A 3ptj_A
Probab=32.99 E-value=89 Score=25.16 Aligned_cols=49 Identities=16% Similarity=-0.008 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCceEEEEEeCCC-cccCchhHHHHHHhCC
Q 024432 200 YTPEQEKAAKESLERQQKVLNRKIVTEILPAKK-FYRAEEYHQQYLAKGG 248 (268)
Q Consensus 200 ~deeQ~~~A~~s~~~lq~~~~~~IvTeI~p~~~-Fy~AEeYHQ~Yl~Knp 248 (268)
-+++|++..++.+++++++.+..|++-+.+--. =..+|+|=++.+++.+
T Consensus 25 Ls~~~~~~l~~~l~~le~~t~~qi~Vvtv~~~~~g~~i~~~A~~l~~~wg 74 (153)
T 3pvh_A 25 LSRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWY 74 (153)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCCEEEEEEESCCSSSCCHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHhhCCEEEEEEEcCCCCCCCHHHHHHHHHHHhC
Confidence 478888888999999999888888888887655 3789999999999854
No 55
>2kpt_A Putative secreted protein; methods development, alpha/beta, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum}
Probab=23.80 E-value=1.2e+02 Score=24.43 Aligned_cols=49 Identities=14% Similarity=0.168 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCceEEEEEeCCCcccCchhHHHHHHhCC
Q 024432 200 YTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGG 248 (268)
Q Consensus 200 ~deeQ~~~A~~s~~~lq~~~~~~IvTeI~p~~~Fy~AEeYHQ~Yl~Knp 248 (268)
-++++++..++.+++++++.+..|++-+.|--.=...|+|=++.+++.+
T Consensus 24 Ls~~~~~~L~~~l~~l~~~tg~qi~VvtV~sl~g~~ie~yA~~l~~~wg 72 (148)
T 2kpt_A 24 ISSSDITNIQAAIDDVKASEQKVIFVVFLSSFDGVDPETWTQQALQANG 72 (148)
T ss_dssp SCHHHHHHHHHHHHHHHHHSCCEEEEEECSCCTTTCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHhhCCEEEEEEECCCCCCCHHHHHHHHHHHhC
Confidence 4788888899999999988877777666654333678899999998864
No 56
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=23.40 E-value=17 Score=33.18 Aligned_cols=27 Identities=26% Similarity=0.261 Sum_probs=0.0
Q ss_pred eeeeeeEeeeccCcceeehccccCCCC
Q 024432 10 TTTTTTVAATISKSPLLLISSSLSSPK 36 (268)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (268)
++|+++..-...++|++++++.+++|+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (261)
T 2j89_A 12 TSTSTTTPLLLLSKPFLSPSAKSQLSH 38 (261)
T ss_dssp ---------------------------
T ss_pred ccccCCccceeeccccccchhhhcccC
Confidence 444444444557889999888777764
No 57
>3mml_B Allophanate hydrolase subunit 1; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=21.43 E-value=1.7e+02 Score=25.63 Aligned_cols=67 Identities=9% Similarity=0.006 Sum_probs=40.5
Q ss_pred cCCCeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHHHhcCCCCCCC--CCCCCCCCCcceee
Q 024432 120 RVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLN--RQGNDVGTQYRSGI 197 (268)
Q Consensus 120 ~l~GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F~~~hDPT~~n--rQG~D~G~QYRSaI 197 (268)
.++||++++.||. .|.|.|||..++. ++++.. +..+-.... ..-...+...+-=+
T Consensus 53 ~~~gv~e~vP~~~---------------------SllV~ydp~~~~~-~~~~~l-~~l~~~~~~~~~~~~~~~r~v~IPV 109 (228)
T 3mml_B 53 ELLGVVDIVPAAR---------------------TVLVKLAGPRYQA-PTRQRL-GKLRVRPEAITHQPPGDRVDVTIDV 109 (228)
T ss_dssp TCTTEEEEEECSS---------------------EEEEEESSGGGHH-HHHHHH-TTCCCSCSSCCCSCGGGCCSEEEEE
T ss_pred CCCCcEEeecccc---------------------EEEEEEcCccCCH-HHHHHH-HHHHhcccccccccCCCCcEEEEec
Confidence 4689999998874 3789999999987 455543 333221110 01112345566667
Q ss_pred ccCCHHHHHHHH
Q 024432 198 YFYTPEQEKAAK 209 (268)
Q Consensus 198 fy~deeQ~~~A~ 209 (268)
.|.+++=..+|+
T Consensus 110 ~Y~gpDL~~vA~ 121 (228)
T 3mml_B 110 VYDGADLHEVAS 121 (228)
T ss_dssp ECCCTTHHHHHH
T ss_pred cCCCCCHHHHHH
Confidence 777765555554
No 58
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=20.44 E-value=20 Score=28.44 Aligned_cols=40 Identities=15% Similarity=0.228 Sum_probs=30.3
Q ss_pred hhhhhhhcCC--CeeEeeeeeeCCCCCCCCccccccCCCCceEEEEEEEcCCCCCHHHHHHHH
Q 024432 113 GVELAFQRVP--GVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMF 173 (268)
Q Consensus 113 gvEa~F~~l~--GVv~t~vGYaGG~~~nPTYe~VcsG~TGHaEaV~V~YDp~~ISye~LL~~F 173 (268)
.+++.+.+|. |++.+.-| .||. ++.-||+.|++.++++..
T Consensus 39 ~l~kIl~~L~~aGlv~s~rG-~GGy--------------------~Lar~p~~Itl~dVi~av 80 (145)
T 1xd7_A 39 VVRRMISLLKKADILTSRAG-VPGA--------------------SLKKDPADISLLEVYRAV 80 (145)
T ss_dssp HHHHHHHHHHHTTSEECCSS-SSSC--------------------EESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHHHCCceEeecC-CCCc--------------------eecCCHHHCCHHHHHHHH
Confidence 3567777764 99988888 7663 355688999999998875
Done!