Query 024436
Match_columns 268
No_of_seqs 245 out of 2025
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:12:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024436.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024436hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 99.9 1.4E-23 4.8E-28 184.3 25.1 149 89-267 164-312 (322)
2 3sre_A PON1, serum paraoxonase 99.9 1E-22 3.6E-27 181.6 22.9 202 35-266 113-355 (355)
3 3g4e_A Regucalcin; six bladed 99.8 8.6E-18 2.9E-22 145.8 24.1 172 24-205 46-245 (297)
4 3dr2_A Exported gluconolactona 99.8 7.6E-17 2.6E-21 140.2 21.8 146 24-172 77-256 (305)
5 2p4o_A Hypothetical protein; p 99.8 3.7E-16 1.3E-20 136.2 24.8 156 35-199 73-253 (306)
6 3e5z_A Putative gluconolactona 99.7 7.3E-16 2.5E-20 132.8 25.0 143 25-172 61-235 (296)
7 3fvz_A Peptidyl-glycine alpha- 99.7 2.8E-16 9.7E-21 138.1 22.5 221 33-267 23-321 (329)
8 3v64_C Agrin; beta propeller, 99.7 2.5E-15 8.5E-20 133.8 23.6 191 30-265 69-272 (349)
9 1q7f_A NHL, brain tumor CG1071 99.7 8E-15 2.7E-19 125.3 25.3 223 33-267 29-279 (286)
10 3v65_B Low-density lipoprotein 99.7 3.9E-15 1.3E-19 134.3 24.2 189 32-265 114-315 (386)
11 1npe_A Nidogen, entactin; glyc 99.7 5E-15 1.7E-19 126.1 23.6 188 34-267 36-237 (267)
12 1ijq_A LDL receptor, low-densi 99.7 1E-14 3.5E-19 128.0 24.5 193 31-266 27-236 (316)
13 4hw6_A Hypothetical protein, I 99.7 1.1E-14 3.9E-19 133.3 24.4 210 32-267 180-432 (433)
14 3tc9_A Hypothetical hydrolase; 99.7 1.5E-14 5E-19 132.4 25.1 215 24-267 170-429 (430)
15 3hrp_A Uncharacterized protein 99.7 4.9E-14 1.7E-18 128.1 27.0 223 33-267 130-409 (409)
16 4a0p_A LRP6, LRP-6, low-densit 99.7 2.3E-14 7.8E-19 137.0 24.2 196 26-267 29-236 (628)
17 1npe_A Nidogen, entactin; glyc 99.7 1.6E-14 5.5E-19 122.9 20.4 157 32-199 77-248 (267)
18 3p5b_L Low density lipoprotein 99.6 3.2E-14 1.1E-18 128.9 23.3 193 31-266 109-318 (400)
19 3sov_A LRP-6, low-density lipo 99.6 2.2E-14 7.6E-19 126.2 20.7 189 33-266 34-236 (318)
20 2qe8_A Uncharacterized protein 99.6 2.7E-14 9.1E-19 126.3 21.0 155 32-192 65-281 (343)
21 2dg1_A DRP35, lactonase; beta 99.6 9.8E-14 3.4E-18 121.0 24.4 170 24-198 77-271 (333)
22 1rwi_B Serine/threonine-protei 99.6 7.4E-14 2.5E-18 117.9 22.3 225 29-267 16-263 (270)
23 3m0c_C LDL receptor, low-densi 99.6 8.7E-14 3E-18 136.0 24.5 192 32-266 422-630 (791)
24 3sov_A LRP-6, low-density lipo 99.6 1.7E-14 5.7E-19 127.0 17.6 159 32-199 77-248 (318)
25 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 3.1E-14 1E-18 122.8 18.6 140 34-176 71-247 (314)
26 3v64_C Agrin; beta propeller, 99.6 2.6E-14 8.9E-19 127.2 18.3 162 27-199 109-285 (349)
27 2ghs_A AGR_C_1268P; regucalcin 99.6 2.4E-13 8.2E-18 119.4 24.0 164 25-199 83-269 (326)
28 2z2n_A Virginiamycin B lyase; 99.6 1.3E-12 4.6E-17 111.2 28.0 227 24-266 4-253 (299)
29 3v65_B Low-density lipoprotein 99.6 2.2E-14 7.4E-19 129.4 16.7 164 25-199 150-328 (386)
30 2qc5_A Streptogramin B lactona 99.6 2E-12 6.9E-17 110.1 27.8 227 24-266 9-258 (300)
31 1ijq_A LDL receptor, low-densi 99.6 1.4E-13 4.7E-18 120.7 20.2 155 32-197 75-246 (316)
32 3s94_A LRP-6, low-density lipo 99.6 2E-13 6.9E-18 130.3 22.3 146 28-176 343-501 (619)
33 2z2n_A Virginiamycin B lyase; 99.6 4.2E-12 1.4E-16 108.1 27.4 228 23-267 45-294 (299)
34 2qc5_A Streptogramin B lactona 99.6 4.5E-12 1.5E-16 107.9 27.5 226 24-267 51-299 (300)
35 3u4y_A Uncharacterized protein 99.6 3.1E-12 1.1E-16 110.9 26.0 232 24-267 32-303 (331)
36 3s94_A LRP-6, low-density lipo 99.6 3.8E-13 1.3E-17 128.4 21.7 195 28-267 34-242 (619)
37 1q7f_A NHL, brain tumor CG1071 99.6 5.5E-13 1.9E-17 113.8 20.6 176 33-229 76-267 (286)
38 3vgz_A Uncharacterized protein 99.6 1.5E-11 5.2E-16 107.0 29.9 226 24-268 33-303 (353)
39 2ism_A Putative oxidoreductase 99.5 6.7E-13 2.3E-17 118.2 21.1 120 22-174 20-154 (352)
40 3p5b_L Low density lipoprotein 99.5 5.8E-13 2E-17 120.7 20.0 157 32-199 157-330 (400)
41 3kya_A Putative phosphatase; s 99.5 2.3E-12 7.9E-17 119.3 24.0 227 33-267 138-474 (496)
42 1rwi_B Serine/threonine-protei 99.5 7.2E-13 2.5E-17 111.8 18.9 174 30-227 63-248 (270)
43 3e5z_A Putative gluconolactona 99.5 3.1E-12 1.1E-16 109.9 22.7 218 21-268 16-286 (296)
44 3dsm_A Uncharacterized protein 99.5 1.1E-12 3.7E-17 115.3 19.7 166 25-200 118-312 (328)
45 1n7d_A LDL receptor, low-densi 99.5 8E-14 2.7E-18 134.9 12.8 194 31-267 403-613 (699)
46 3tc9_A Hypothetical hydrolase; 99.5 9.3E-13 3.2E-17 120.4 19.0 148 32-189 135-300 (430)
47 3g4e_A Regucalcin; six bladed 99.5 2.1E-11 7.2E-16 105.3 26.5 213 26-258 5-263 (297)
48 2iwa_A Glutamine cyclotransfer 99.5 1.1E-11 3.9E-16 106.0 23.6 164 23-198 10-190 (266)
49 2p4o_A Hypothetical protein; p 99.5 3.6E-11 1.2E-15 104.4 27.1 216 24-258 24-279 (306)
50 3dsm_A Uncharacterized protein 99.5 3E-11 1E-15 106.0 26.0 218 34-267 44-301 (328)
51 3fvz_A Peptidyl-glycine alpha- 99.5 3.7E-12 1.3E-16 111.7 19.3 176 31-226 88-305 (329)
52 3a9g_A Putative uncharacterize 99.5 1.9E-11 6.5E-16 109.0 23.6 148 24-176 20-219 (354)
53 1n7d_A LDL receptor, low-densi 99.5 2.7E-13 9.4E-18 131.1 12.3 157 33-200 452-625 (699)
54 3hrp_A Uncharacterized protein 99.5 3E-12 1E-16 116.2 18.3 140 32-177 217-402 (409)
55 4hw6_A Hypothetical protein, I 99.5 2.6E-12 9E-17 117.6 17.9 143 32-177 137-296 (433)
56 4a0p_A LRP6, LRP-6, low-densit 99.5 1.2E-11 4.1E-16 118.2 23.1 196 27-267 333-548 (628)
57 3vgz_A Uncharacterized protein 99.4 1.9E-10 6.4E-15 100.1 28.3 165 24-199 81-272 (353)
58 3hfq_A Uncharacterized protein 99.4 4.8E-11 1.6E-15 104.4 23.0 140 33-176 85-262 (347)
59 3das_A Putative oxidoreductase 99.4 1.3E-10 4.4E-15 103.1 25.6 216 24-267 23-291 (347)
60 1l0q_A Surface layer protein; 99.4 3.3E-09 1.1E-13 93.8 31.7 227 24-268 24-275 (391)
61 2dg1_A DRP35, lactonase; beta 99.4 3E-10 1E-14 98.7 24.3 137 33-176 44-204 (333)
62 1jof_A Carboxy-CIS,CIS-muconat 99.4 1.3E-09 4.5E-14 96.5 27.8 142 30-176 36-215 (365)
63 1nir_A Nitrite reductase; hemo 99.3 2E-09 6.9E-14 101.0 30.2 232 24-268 171-458 (543)
64 3hfq_A Uncharacterized protein 99.3 3.2E-10 1.1E-14 99.1 22.8 141 33-176 39-209 (347)
65 3m0c_C LDL receptor, low-densi 99.3 5E-10 1.7E-14 109.5 24.9 90 83-175 439-535 (791)
66 1jmx_B Amine dehydrogenase; ox 99.3 1.8E-09 6.3E-14 93.4 24.2 154 36-199 2-185 (349)
67 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 5.5E-10 1.9E-14 95.8 20.4 141 25-176 10-198 (314)
68 3dr2_A Exported gluconolactona 99.3 6.9E-10 2.4E-14 96.0 20.7 141 23-174 35-208 (305)
69 2g8s_A Glucose/sorbosone dehyd 99.3 2.5E-10 8.5E-15 101.6 17.2 122 24-175 9-150 (353)
70 1ri6_A Putative isomerase YBHE 99.2 9.5E-09 3.3E-13 88.5 26.1 148 25-176 31-200 (343)
71 3u4y_A Uncharacterized protein 99.2 1E-08 3.4E-13 88.6 26.0 148 25-176 76-243 (331)
72 3no2_A Uncharacterized protein 99.2 6.6E-09 2.2E-13 89.1 24.2 157 24-197 27-203 (276)
73 3scy_A Hypothetical bacterial 99.2 6.7E-09 2.3E-13 91.2 24.8 137 34-174 100-279 (361)
74 2ghs_A AGR_C_1268P; regucalcin 99.2 7.1E-09 2.4E-13 90.7 24.5 214 25-259 40-294 (326)
75 3kya_A Putative phosphatase; s 99.2 7.3E-10 2.5E-14 102.5 17.8 154 33-193 185-413 (496)
76 1cru_A Protein (soluble quinop 99.2 1.4E-09 4.6E-14 100.1 18.5 125 24-176 18-165 (454)
77 3nol_A Glutamine cyclotransfer 99.2 4.2E-09 1.4E-13 89.4 20.0 133 90-268 65-201 (262)
78 3nok_A Glutaminyl cyclase; bet 99.2 4.7E-09 1.6E-13 89.2 20.2 203 24-266 45-264 (268)
79 2qe8_A Uncharacterized protein 99.2 2.2E-09 7.7E-14 94.5 19.1 141 34-176 17-217 (343)
80 3scy_A Hypothetical bacterial 99.2 4.7E-08 1.6E-12 85.8 27.3 143 32-176 48-233 (361)
81 3mbr_X Glutamine cyclotransfer 99.2 1.3E-08 4.3E-13 85.7 22.3 131 90-268 43-179 (243)
82 3c75_H MADH, methylamine dehyd 99.1 2.4E-09 8.2E-14 97.6 18.5 162 90-266 99-293 (426)
83 1l0q_A Surface layer protein; 99.1 4.4E-08 1.5E-12 86.5 26.2 165 23-199 65-243 (391)
84 1nir_A Nitrite reductase; hemo 99.1 2.6E-08 8.8E-13 93.5 25.8 166 23-199 213-419 (543)
85 3bws_A Protein LP49; two-domai 99.1 2.3E-08 7.7E-13 89.6 24.3 218 35-267 171-431 (433)
86 3bws_A Protein LP49; two-domai 99.1 1.1E-07 3.9E-12 85.0 28.3 144 24-175 115-275 (433)
87 3no2_A Uncharacterized protein 99.1 2.9E-08 1E-12 85.0 22.9 185 24-246 67-273 (276)
88 2mad_H Methylamine dehydrogena 99.1 3.1E-08 1.1E-12 88.6 23.7 102 91-200 48-168 (373)
89 1fwx_A Nitrous oxide reductase 99.1 2E-09 6.8E-14 101.1 16.2 198 23-232 123-407 (595)
90 2mad_H Methylamine dehydrogena 99.1 7.1E-08 2.4E-12 86.3 25.4 53 89-142 96-157 (373)
91 2iwa_A Glutamine cyclotransfer 99.1 4.2E-08 1.4E-12 83.8 22.5 134 88-268 42-181 (266)
92 3c75_H MADH, methylamine dehyd 99.1 3.2E-08 1.1E-12 90.1 22.9 102 23-128 110-246 (426)
93 1pby_B Quinohemoprotein amine 99.1 1.2E-07 4.1E-12 81.3 25.5 143 24-172 23-192 (337)
94 1qks_A Cytochrome CD1 nitrite 99.1 1.4E-08 4.8E-13 95.8 21.1 173 85-268 172-373 (567)
95 3sjl_D Methylamine dehydrogena 99.1 5.1E-09 1.7E-13 94.1 17.1 102 89-199 58-179 (386)
96 1qks_A Cytochrome CD1 nitrite 99.1 1.4E-07 4.9E-12 88.9 27.8 164 24-198 189-382 (567)
97 2p9w_A MAL S 1 allergenic prot 99.1 1.8E-08 6.2E-13 88.2 19.9 130 26-191 6-169 (334)
98 1ri6_A Putative isomerase YBHE 99.1 9.1E-08 3.1E-12 82.3 24.2 149 24-176 76-253 (343)
99 2oiz_A Aromatic amine dehydrog 99.1 1.3E-08 4.4E-13 90.5 19.2 138 89-236 30-185 (361)
100 2oiz_A Aromatic amine dehydrog 99.0 1.6E-07 5.5E-12 83.3 24.5 85 115-225 259-360 (361)
101 3qqz_A Putative uncharacterize 99.0 1E-06 3.4E-11 74.8 27.5 142 29-176 21-195 (255)
102 3a9g_A Putative uncharacterize 99.0 4.6E-08 1.6E-12 87.0 19.8 142 33-176 72-287 (354)
103 1jof_A Carboxy-CIS,CIS-muconat 99.0 1E-07 3.5E-12 84.2 21.2 141 33-176 144-332 (365)
104 1pby_B Quinohemoprotein amine 99.0 3E-07 1E-11 78.8 23.6 78 110-199 241-320 (337)
105 1mda_H Methylamine dehydrogena 99.0 1.7E-08 5.9E-13 90.2 15.8 159 91-267 47-239 (368)
106 2ece_A 462AA long hypothetical 99.0 9.1E-08 3.1E-12 87.1 20.2 189 33-231 137-399 (462)
107 2ymu_A WD-40 repeat protein; u 98.9 1.1E-06 3.8E-11 81.5 27.9 220 24-261 336-573 (577)
108 3nok_A Glutaminyl cyclase; bet 98.9 3E-08 1E-12 84.3 15.5 134 87-268 72-210 (268)
109 2p9w_A MAL S 1 allergenic prot 98.9 4.2E-07 1.5E-11 79.6 22.4 145 24-176 46-256 (334)
110 2ymu_A WD-40 repeat protein; u 98.9 1E-06 3.6E-11 81.6 26.1 217 33-266 303-537 (577)
111 2fp8_A Strictosidine synthase; 98.9 6E-08 2E-12 84.3 16.6 137 33-177 125-305 (322)
112 3sre_A PON1, serum paraoxonase 98.9 1.4E-07 4.6E-12 83.9 18.2 139 31-177 46-244 (355)
113 2hqs_A Protein TOLB; TOLB, PAL 98.9 9.8E-07 3.4E-11 79.6 23.9 134 35-171 180-327 (415)
114 2ism_A Putative oxidoreductase 98.8 1.8E-07 6.2E-12 82.9 17.3 64 110-175 268-335 (352)
115 2ece_A 462AA long hypothetical 98.8 4.6E-07 1.6E-11 82.5 19.4 147 24-172 176-399 (462)
116 3sjl_D Methylamine dehydrogena 98.8 2E-06 7E-11 77.1 23.4 145 24-174 121-300 (386)
117 1mda_H Methylamine dehydrogena 98.8 1.2E-07 4.3E-12 84.7 15.3 79 111-199 262-356 (368)
118 3qqz_A Putative uncharacterize 98.8 9.6E-07 3.3E-11 74.9 19.2 149 22-175 58-244 (255)
119 3das_A Putative oxidoreductase 98.7 6.5E-07 2.2E-11 79.3 17.6 90 87-176 50-161 (347)
120 1gxr_A ESG1, transducin-like e 98.7 2.8E-05 9.6E-10 66.2 26.9 136 34-176 98-246 (337)
121 4ery_A WD repeat-containing pr 98.7 3.8E-05 1.3E-09 65.5 27.2 140 31-176 21-171 (312)
122 1jmx_B Amine dehydrogenase; ox 98.7 1.2E-06 4E-11 75.6 17.6 77 111-199 256-335 (349)
123 2ojh_A Uncharacterized protein 98.7 7.7E-06 2.6E-10 68.1 21.9 134 35-173 43-192 (297)
124 2hqs_A Protein TOLB; TOLB, PAL 98.6 2.5E-06 8.6E-11 76.9 19.2 137 35-175 224-375 (415)
125 2g8s_A Glucose/sorbosone dehyd 98.6 8.9E-07 3E-11 78.5 14.8 64 110-174 271-342 (353)
126 3ow8_A WD repeat-containing pr 98.6 5.3E-05 1.8E-09 65.5 25.8 146 24-176 114-270 (321)
127 3nol_A Glutamine cyclotransfer 98.6 4.6E-06 1.6E-10 70.7 18.1 141 23-173 76-244 (262)
128 3zwl_B Eukaryotic translation 98.6 5.3E-05 1.8E-09 65.2 25.4 139 34-176 33-197 (369)
129 3ei3_B DNA damage-binding prot 98.6 3.5E-05 1.2E-09 67.6 24.1 141 33-176 118-273 (383)
130 2ecf_A Dipeptidyl peptidase IV 98.6 5.2E-05 1.8E-09 72.6 27.1 133 34-175 37-230 (741)
131 1k8k_C P40, ARP2/3 complex 41 98.6 4E-05 1.4E-09 66.4 24.0 139 34-176 9-164 (372)
132 3hxj_A Pyrrolo-quinoline quino 98.6 2.1E-05 7.1E-10 67.4 21.8 197 39-259 103-316 (330)
133 1fwx_A Nitrous oxide reductase 98.5 1.1E-05 3.7E-10 75.9 20.9 139 39-177 90-300 (595)
134 1gxr_A ESG1, transducin-like e 98.5 6.7E-05 2.3E-09 63.8 24.3 136 34-176 142-287 (337)
135 3ei3_B DNA damage-binding prot 98.5 0.00012 4.2E-09 64.1 25.8 143 30-176 70-227 (383)
136 4h5i_A Guanine nucleotide-exch 98.5 0.0004 1.4E-08 61.1 29.2 86 88-176 104-198 (365)
137 3vl1_A 26S proteasome regulato 98.5 4E-05 1.4E-09 67.9 22.6 151 36-197 59-220 (420)
138 3azo_A Aminopeptidase; POP fam 98.5 3.5E-05 1.2E-09 72.9 23.1 133 42-175 87-262 (662)
139 3ow8_A WD repeat-containing pr 98.5 0.00026 8.9E-09 61.1 26.7 138 33-176 80-228 (321)
140 2ojh_A Uncharacterized protein 98.5 1.1E-05 3.7E-10 67.2 17.3 139 35-173 130-291 (297)
141 3o4h_A Acylamino-acid-releasin 98.5 6.8E-06 2.3E-10 76.8 17.6 139 35-176 111-267 (582)
142 3mbr_X Glutamine cyclotransfer 98.5 1.4E-05 4.8E-10 67.0 17.5 142 23-173 54-223 (243)
143 2ynn_A Coatomer subunit beta'; 98.4 0.00014 4.8E-09 62.1 24.0 138 34-176 14-163 (304)
144 2z3z_A Dipeptidyl aminopeptida 98.4 3.8E-05 1.3E-09 73.2 22.4 83 88-172 233-329 (706)
145 3v9f_A Two-component system se 98.4 6.5E-05 2.2E-09 73.0 24.3 217 35-267 364-610 (781)
146 3zwl_B Eukaryotic translation 98.4 0.00056 1.9E-08 58.7 27.7 166 24-197 66-257 (369)
147 1pgu_A Actin interacting prote 98.4 0.00025 8.6E-09 65.6 26.8 164 24-196 55-245 (615)
148 3frx_A Guanine nucleotide-bind 98.4 0.00045 1.5E-08 59.4 26.4 139 34-176 108-259 (319)
149 3frx_A Guanine nucleotide-bind 98.4 0.00014 4.7E-09 62.7 23.1 154 34-197 66-235 (319)
150 3pe7_A Oligogalacturonate lyas 98.4 6.4E-05 2.2E-09 65.8 21.2 132 38-172 85-256 (388)
151 3s25_A Hypothetical 7-bladed b 98.4 0.00016 5.4E-09 62.6 22.6 191 54-267 87-292 (302)
152 1got_B GT-beta; complex (GTP-b 98.4 0.00053 1.8E-08 59.4 26.2 137 33-176 55-206 (340)
153 4aez_A CDC20, WD repeat-contai 98.4 0.00011 3.8E-09 65.2 22.1 144 33-176 217-371 (401)
154 4a2l_A BT_4663, two-component 98.4 0.00029 1E-08 68.5 26.7 213 35-267 358-613 (795)
155 4gqb_B Methylosome protein 50; 98.4 0.00013 4.5E-09 63.9 22.1 139 34-176 128-280 (344)
156 3fm0_A Protein CIAO1; WDR39,SG 98.4 0.00077 2.6E-08 58.6 26.9 146 25-176 8-172 (345)
157 1r5m_A SIR4-interacting protei 98.3 0.00017 5.8E-09 63.3 22.7 216 35-267 110-360 (425)
158 4aez_A CDC20, WD repeat-contai 98.3 0.00098 3.4E-08 58.9 27.9 165 24-198 125-302 (401)
159 4gqb_B Methylosome protein 50; 98.3 0.00012 4E-09 64.3 21.4 136 35-176 84-237 (344)
160 4h5i_A Guanine nucleotide-exch 98.3 0.00021 7.2E-09 62.9 23.1 175 36-231 136-331 (365)
161 3amr_A 3-phytase; beta-propell 98.3 0.00011 3.9E-09 64.7 20.9 136 42-187 37-207 (355)
162 1erj_A Transcriptional repress 98.3 0.0014 4.7E-08 58.0 29.1 150 34-196 65-245 (393)
163 1got_B GT-beta; complex (GTP-b 98.3 0.00066 2.3E-08 58.8 25.6 148 24-176 89-248 (340)
164 1vyh_C Platelet-activating fac 98.3 0.00042 1.4E-08 61.9 24.5 136 35-176 110-256 (410)
165 1erj_A Transcriptional repress 98.3 0.00068 2.3E-08 60.0 25.7 135 36-176 126-278 (393)
166 3mkq_A Coatomer beta'-subunit; 98.3 0.00014 4.8E-09 70.1 22.7 138 34-176 14-163 (814)
167 4g56_B MGC81050 protein; prote 98.3 6.6E-05 2.2E-09 66.0 18.4 138 35-176 96-249 (357)
168 3v9f_A Two-component system se 98.3 0.00023 8E-09 69.1 23.5 213 35-265 408-653 (781)
169 2ecf_A Dipeptidyl peptidase IV 98.3 0.00023 8E-09 68.1 23.2 82 91-175 264-357 (741)
170 1r5m_A SIR4-interacting protei 98.2 0.0003 1E-08 61.7 22.0 136 34-175 46-227 (425)
171 3hxj_A Pyrrolo-quinoline quino 98.2 0.00029 9.8E-09 60.2 21.3 148 36-199 139-293 (330)
172 1k8k_C P40, ARP2/3 complex 41 98.2 0.00032 1.1E-08 60.6 21.8 166 24-199 44-243 (372)
173 2xzm_R RACK1; ribosome, transl 98.2 0.00046 1.6E-08 59.8 22.8 140 34-176 119-277 (343)
174 4ery_A WD repeat-containing pr 98.2 0.0017 5.8E-08 55.0 29.0 137 34-176 66-214 (312)
175 3jrp_A Fusion protein of prote 98.2 0.0006 2.1E-08 58.8 23.3 139 34-176 12-182 (379)
176 3vl1_A 26S proteasome regulato 98.2 0.00054 1.8E-08 60.5 23.0 213 39-267 103-364 (420)
177 3s25_A Hypothetical 7-bladed b 98.2 0.0003 1E-08 60.9 20.6 201 43-267 23-254 (302)
178 2vdu_B TRNA (guanine-N(7)-)-me 98.2 0.0005 1.7E-08 61.9 23.1 88 88-176 123-220 (450)
179 1nr0_A Actin interacting prote 98.2 0.00053 1.8E-08 64.6 24.1 155 34-196 60-228 (611)
180 3dwl_C Actin-related protein 2 98.2 8.3E-05 2.8E-09 64.9 17.2 138 35-176 13-168 (377)
181 3dw8_B Serine/threonine-protei 98.2 0.00053 1.8E-08 60.9 22.8 65 109-176 177-249 (447)
182 2pm9_A Protein WEB1, protein t 98.2 0.00014 4.8E-09 64.0 18.6 155 34-197 114-302 (416)
183 4e54_B DNA damage-binding prot 98.2 0.00014 4.6E-09 65.4 18.6 138 34-176 165-318 (435)
184 2vdu_B TRNA (guanine-N(7)-)-me 98.2 0.0015 5.1E-08 58.7 25.6 151 35-197 104-279 (450)
185 2pbi_B Guanine nucleotide-bind 98.2 0.00036 1.2E-08 61.0 20.9 136 35-176 156-306 (354)
186 3gre_A Serine/threonine-protei 98.2 0.0015 5.1E-08 58.1 25.2 235 23-268 53-359 (437)
187 2pm9_A Protein WEB1, protein t 98.2 0.00031 1.1E-08 61.7 20.2 219 35-267 69-336 (416)
188 2gop_A Trilobed protease; beta 98.1 0.0014 4.6E-08 56.4 23.4 131 33-172 14-187 (347)
189 3c5m_A Oligogalacturonate lyas 98.1 0.00055 1.9E-08 59.7 21.0 131 39-174 86-258 (396)
190 2wg3_C Hedgehog-interacting pr 98.1 0.00012 4.2E-09 67.2 16.6 146 25-173 6-242 (463)
191 1vyh_C Platelet-activating fac 98.1 0.00061 2.1E-08 60.8 20.9 104 34-141 151-265 (410)
192 3lrv_A PRE-mRNA-splicing facto 98.1 0.00089 3E-08 57.9 21.3 144 25-174 117-280 (343)
193 2xzm_R RACK1; ribosome, transl 98.1 0.0018 6.2E-08 56.0 23.0 137 34-176 77-235 (343)
194 4g56_B MGC81050 protein; prote 98.1 0.00025 8.6E-09 62.2 17.6 138 35-176 141-292 (357)
195 3azo_A Aminopeptidase; POP fam 98.1 0.00032 1.1E-08 66.3 19.5 135 36-174 132-313 (662)
196 3dm0_A Maltose-binding peripla 98.1 0.0018 6.2E-08 61.7 24.8 154 34-197 431-600 (694)
197 1xfd_A DIP, dipeptidyl aminope 98.1 0.0022 7.6E-08 61.0 25.2 90 35-128 62-191 (723)
198 4a2l_A BT_4663, two-component 98.0 0.00026 9E-09 68.8 18.9 130 35-173 453-604 (795)
199 1k32_A Tricorn protease; prote 98.0 0.0011 3.8E-08 66.5 23.9 96 34-129 379-491 (1045)
200 3q6k_A 43.2 kDa salivary prote 98.0 0.0016 5.5E-08 58.1 22.2 145 32-176 85-297 (381)
201 2aq5_A Coronin-1A; WD40 repeat 98.0 0.00027 9.2E-09 62.5 17.3 146 24-170 166-329 (402)
202 1nr0_A Actin interacting prote 98.0 0.0013 4.5E-08 61.8 22.9 64 111-176 450-513 (611)
203 1k32_A Tricorn protease; prote 98.0 0.00074 2.5E-08 67.7 22.1 128 35-171 297-437 (1045)
204 1cru_A Protein (soluble quinop 98.0 4.4E-05 1.5E-09 69.9 12.2 71 100-174 17-100 (454)
205 1yfq_A Cell cycle arrest prote 98.0 0.00041 1.4E-08 59.2 17.6 134 33-175 11-170 (342)
206 3k26_A Polycomb protein EED; W 98.0 0.002 6.7E-08 55.2 21.8 150 24-176 9-183 (366)
207 3mkq_A Coatomer beta'-subunit; 98.0 0.00063 2.2E-08 65.5 20.5 162 24-197 47-225 (814)
208 2xyi_A Probable histone-bindin 98.0 0.00074 2.5E-08 60.5 19.5 148 25-176 122-300 (430)
209 1sq9_A Antiviral protein SKI8; 98.0 0.0012 4.2E-08 57.5 20.5 136 34-176 122-313 (397)
210 4aow_A Guanine nucleotide-bind 98.0 0.0055 1.9E-07 51.9 24.1 138 34-176 87-237 (340)
211 3jro_A Fusion protein of prote 98.0 0.00088 3E-08 64.8 21.0 130 31-164 7-155 (753)
212 2xyi_A Probable histone-bindin 98.0 0.0021 7.2E-08 57.5 22.2 148 24-176 173-344 (430)
213 3pe7_A Oligogalacturonate lyas 98.0 0.00029 1E-08 61.6 16.1 135 35-172 189-369 (388)
214 2ynn_A Coatomer subunit beta'; 98.0 0.0011 3.6E-08 56.5 19.1 113 24-141 47-172 (304)
215 3dwl_C Actin-related protein 2 98.0 0.00043 1.5E-08 60.2 16.9 139 34-176 56-227 (377)
216 2pbi_B Guanine nucleotide-bind 98.0 0.0077 2.6E-07 52.4 27.5 138 33-176 64-220 (354)
217 3fm0_A Protein CIAO1; WDR39,SG 98.0 0.00067 2.3E-08 58.9 18.1 137 33-176 61-216 (345)
218 1sq9_A Antiviral protein SKI8; 97.9 0.0045 1.6E-07 53.8 23.3 160 31-198 14-225 (397)
219 2pm7_B Protein transport prote 97.9 0.0068 2.3E-07 51.2 24.3 105 33-141 9-132 (297)
220 2hes_X YDR267CP; beta-propelle 97.9 0.0077 2.6E-07 51.8 25.6 135 34-175 59-220 (330)
221 3sfz_A APAF-1, apoptotic pepti 97.9 0.0056 1.9E-07 62.0 26.8 147 24-175 649-819 (1249)
222 4a11_B DNA excision repair pro 97.9 0.0084 2.9E-07 52.0 26.3 147 21-174 32-207 (408)
223 3f3f_A Nucleoporin SEH1; struc 97.9 0.0033 1.1E-07 52.9 21.5 113 25-141 3-143 (351)
224 1pgu_A Actin interacting prote 97.9 0.0028 9.6E-08 58.5 22.6 151 34-197 19-200 (615)
225 2z3z_A Dipeptidyl aminopeptida 97.9 0.00055 1.9E-08 65.1 18.2 133 35-172 259-418 (706)
226 4aow_A Guanine nucleotide-bind 97.9 0.0076 2.6E-07 51.0 23.3 138 33-175 128-277 (340)
227 3odt_A Protein DOA1; ubiquitin 97.9 0.005 1.7E-07 51.4 21.8 213 34-267 60-295 (313)
228 2aq5_A Coronin-1A; WD40 repeat 97.9 0.0017 5.9E-08 57.2 19.4 139 34-176 132-290 (402)
229 3i2n_A WD repeat-containing pr 97.9 0.0021 7E-08 55.0 19.2 136 34-176 66-234 (357)
230 4a11_B DNA excision repair pro 97.9 0.0028 9.7E-08 55.0 20.4 142 34-176 100-267 (408)
231 4a5s_A Dipeptidyl peptidase 4 97.9 0.0022 7.4E-08 61.8 21.3 103 36-142 19-142 (740)
232 1z68_A Fibroblast activation p 97.8 0.0013 4.6E-08 62.6 19.6 89 36-128 62-187 (719)
233 3dm0_A Maltose-binding peripla 97.8 0.0023 7.9E-08 61.0 21.1 136 34-176 473-624 (694)
234 3k26_A Polycomb protein EED; W 97.8 0.0019 6.6E-08 55.2 18.5 104 34-141 70-192 (366)
235 4a9v_A PHOX; hydrolase, beta-p 97.8 4.5E-05 1.5E-09 71.2 8.3 78 32-132 474-553 (592)
236 4a9v_A PHOX; hydrolase, beta-p 97.8 0.0002 6.8E-09 66.9 12.4 65 108-176 474-553 (592)
237 3mmy_A MRNA export factor; mRN 97.8 0.0044 1.5E-07 52.9 19.9 106 33-142 39-161 (368)
238 3i2n_A WD repeat-containing pr 97.8 0.0022 7.5E-08 54.8 17.9 148 24-176 9-190 (357)
239 1yfq_A Cell cycle arrest prote 97.8 0.00056 1.9E-08 58.4 13.9 136 34-176 57-216 (342)
240 2xdw_A Prolyl endopeptidase; a 97.7 0.0078 2.7E-07 57.6 23.1 99 74-173 133-252 (710)
241 3sfz_A APAF-1, apoptotic pepti 97.7 0.0018 6.3E-08 65.5 19.4 135 35-176 963-1107(1249)
242 3o4h_A Acylamino-acid-releasin 97.7 0.00015 5E-09 67.7 10.4 129 37-175 153-302 (582)
243 4gga_A P55CDC, cell division c 97.7 0.023 7.7E-07 50.4 27.2 232 24-266 137-393 (420)
244 4e54_B DNA damage-binding prot 97.7 0.0023 7.9E-08 57.3 17.6 106 35-176 121-231 (435)
245 3odt_A Protein DOA1; ubiquitin 97.7 0.004 1.4E-07 52.0 17.9 147 35-198 106-264 (313)
246 1xfd_A DIP, dipeptidyl aminope 97.7 0.0002 6.7E-09 68.3 10.6 133 35-173 18-192 (723)
247 3jrp_A Fusion protein of prote 97.7 0.019 6.3E-07 49.2 22.3 138 34-176 56-231 (379)
248 4a5s_A Dipeptidyl peptidase 4 97.6 0.019 6.4E-07 55.2 23.7 87 37-127 65-188 (740)
249 3lrv_A PRE-mRNA-splicing facto 97.6 0.005 1.7E-07 53.1 17.9 132 41-176 44-192 (343)
250 3iz6_a 40S ribosomal protein R 97.6 0.0083 2.8E-07 52.6 19.3 136 35-176 207-366 (380)
251 3dw8_B Serine/threonine-protei 97.6 0.0075 2.5E-07 53.4 19.1 141 28-176 172-364 (447)
252 3iz6_a 40S ribosomal protein R 97.6 0.033 1.1E-06 48.8 28.7 142 33-176 66-271 (380)
253 4gga_A P55CDC, cell division c 97.6 0.018 6.3E-07 51.0 21.5 139 33-176 230-386 (420)
254 2j04_A TAU60, YPL007P, hypothe 97.6 0.0079 2.7E-07 56.4 19.3 133 33-174 85-244 (588)
255 2oaj_A Protein SNI1; WD40 repe 97.6 0.01 3.6E-07 58.7 21.4 138 34-176 18-174 (902)
256 3v7d_B Cell division control p 97.5 0.045 1.5E-06 48.8 27.9 152 33-198 162-350 (464)
257 3amr_A 3-phytase; beta-propell 97.5 0.011 3.7E-07 52.1 18.1 110 87-199 47-179 (355)
258 2oit_A Nucleoporin 214KDA; NH2 97.5 0.031 1.1E-06 50.3 21.8 151 35-196 38-229 (434)
259 4ggc_A P55CDC, cell division c 97.4 0.038 1.3E-06 46.1 21.1 139 33-176 150-306 (318)
260 2j04_A TAU60, YPL007P, hypothe 97.4 0.0027 9.1E-08 59.6 14.3 131 34-176 16-151 (588)
261 2bkl_A Prolyl endopeptidase; m 97.4 0.023 7.9E-07 54.2 21.3 99 74-174 129-247 (695)
262 3mmy_A MRNA export factor; mRN 97.4 0.051 1.7E-06 46.1 21.4 33 34-66 87-119 (368)
263 3gre_A Serine/threonine-protei 97.4 0.026 9.1E-07 49.9 19.9 107 34-141 112-245 (437)
264 3bg1_A Protein SEC13 homolog; 97.3 0.01 3.4E-07 50.7 15.8 142 34-176 104-284 (316)
265 4ggc_A P55CDC, cell division c 97.3 0.056 1.9E-06 45.0 28.7 117 23-141 56-181 (318)
266 3ott_A Two-component system se 97.3 0.049 1.7E-06 52.5 21.9 132 36-173 375-535 (758)
267 2pm7_B Protein transport prote 97.3 0.01 3.6E-07 50.0 15.4 142 35-176 101-276 (297)
268 3q7m_A Lipoprotein YFGL, BAMB; 97.3 0.078 2.7E-06 46.0 22.3 205 44-268 102-337 (376)
269 2wg3_C Hedgehog-interacting pr 97.3 0.0013 4.3E-08 60.4 10.1 71 101-174 5-92 (463)
270 2xdw_A Prolyl endopeptidase; a 97.3 0.055 1.9E-06 51.6 22.0 160 36-199 173-378 (710)
271 2w18_A PALB2, fancn, partner a 97.3 0.058 2E-06 47.5 20.1 121 35-173 113-245 (356)
272 3bg1_A Protein SEC13 homolog; 97.3 0.031 1.1E-06 47.5 18.3 110 28-141 8-136 (316)
273 2hes_X YDR267CP; beta-propelle 97.2 0.082 2.8E-06 45.2 25.1 146 23-176 5-175 (330)
274 1z68_A Fibroblast activation p 97.2 0.0057 2E-07 58.2 14.3 101 36-142 18-140 (719)
275 3zwu_A Alkaline phosphatase PH 97.2 0.0053 1.8E-07 57.9 13.5 68 108-175 382-496 (592)
276 2bkl_A Prolyl endopeptidase; m 97.2 0.093 3.2E-06 49.9 22.6 157 37-199 171-360 (695)
277 1yr2_A Prolyl oligopeptidase; 97.2 0.067 2.3E-06 51.4 21.4 98 74-173 171-287 (741)
278 2ad6_A Methanol dehydrogenase 97.2 0.11 3.7E-06 48.6 22.3 42 215-258 485-527 (571)
279 3f3f_A Nucleoporin SEH1; struc 97.1 0.026 8.7E-07 47.3 16.2 105 34-141 111-249 (351)
280 1kb0_A Quinohemoprotein alcoho 97.1 0.2 6.8E-06 47.8 24.0 65 37-103 246-350 (677)
281 2oaj_A Protein SNI1; WD40 repe 97.1 0.043 1.5E-06 54.2 19.9 136 34-176 59-233 (902)
282 3c5m_A Oligogalacturonate lyas 97.1 0.038 1.3E-06 47.7 17.6 133 35-172 189-369 (396)
283 3vu4_A KMHSV2; beta-propeller 97.0 0.041 1.4E-06 47.7 17.2 142 24-176 93-262 (355)
284 3jro_A Fusion protein of prote 97.0 0.041 1.4E-06 53.0 18.7 138 34-176 54-229 (753)
285 3vu4_A KMHSV2; beta-propeller 96.9 0.17 5.8E-06 43.7 26.9 100 34-140 20-127 (355)
286 2j04_B YDR362CP, TAU91; beta p 96.9 0.072 2.5E-06 49.3 18.2 135 35-176 268-419 (524)
287 1p22_A F-BOX/WD-repeat protein 96.9 0.22 7.4E-06 44.1 22.2 209 39-266 137-363 (435)
288 1yiq_A Quinohemoprotein alcoho 96.8 0.22 7.6E-06 47.6 21.2 66 38-103 239-342 (689)
289 3q7m_A Lipoprotein YFGL, BAMB; 96.7 0.27 9.1E-06 42.6 23.3 200 45-267 53-295 (376)
290 2j04_B YDR362CP, TAU91; beta p 96.7 0.11 3.9E-06 48.0 17.9 136 35-176 209-377 (524)
291 1yr2_A Prolyl oligopeptidase; 96.6 0.45 1.5E-05 45.6 22.3 156 37-199 212-404 (741)
292 1kv9_A Type II quinohemoprotei 96.6 0.44 1.5E-05 45.3 21.8 66 38-103 234-337 (668)
293 2oit_A Nucleoporin 214KDA; NH2 96.5 0.0093 3.2E-07 53.8 8.9 102 35-140 94-222 (434)
294 1flg_A Protein (quinoprotein e 96.5 0.57 2E-05 43.9 22.3 40 215-256 507-547 (582)
295 3sbq_A Nitrous-oxide reductase 96.4 0.036 1.2E-06 51.7 12.1 91 91-182 299-404 (638)
296 2gop_A Trilobed protease; beta 96.4 0.015 5.1E-07 49.7 9.2 76 89-172 42-122 (347)
297 3ott_A Two-component system se 96.3 0.68 2.3E-05 44.4 21.6 132 36-171 326-488 (758)
298 3q6k_A 43.2 kDa salivary prote 96.3 0.11 3.8E-06 46.2 14.3 61 114-175 279-344 (381)
299 3zwu_A Alkaline phosphatase PH 96.2 0.022 7.6E-07 53.6 10.1 65 108-176 474-553 (592)
300 3iuj_A Prolyl endopeptidase; h 96.1 0.54 1.9E-05 44.7 19.6 82 89-173 154-253 (693)
301 2w18_A PALB2, fancn, partner a 96.1 0.64 2.2E-05 40.8 18.6 137 37-176 182-348 (356)
302 3v7d_B Cell division control p 96.1 0.71 2.4E-05 40.8 28.2 98 40-142 127-237 (464)
303 1w6s_A Methanol dehydrogenase 96.0 1 3.4E-05 42.4 23.0 40 215-256 494-534 (599)
304 3iuj_A Prolyl endopeptidase; h 96.0 0.93 3.2E-05 43.1 20.5 156 37-199 178-368 (693)
305 2ovr_B FBW7, F-BOX/WD repeat p 95.8 0.93 3.2E-05 39.9 28.0 209 40-267 124-347 (445)
306 4gq1_A NUP37; propeller, trans 95.8 0.84 2.9E-05 39.8 17.8 102 41-142 97-219 (393)
307 2xe4_A Oligopeptidase B; hydro 95.5 0.7 2.4E-05 44.5 17.7 82 90-173 201-290 (751)
308 2ovr_B FBW7, F-BOX/WD repeat p 95.5 1.2 4.1E-05 39.2 26.5 210 35-267 161-390 (445)
309 4gq1_A NUP37; propeller, trans 95.3 0.47 1.6E-05 41.5 14.5 123 35-176 256-381 (393)
310 1tl2_A L10, protein (tachylect 94.6 0.42 1.4E-05 39.3 11.0 138 25-172 32-199 (236)
311 3sbq_A Nitrous-oxide reductase 94.4 0.4 1.4E-05 44.8 11.6 128 23-175 314-455 (638)
312 1p22_A F-BOX/WD-repeat protein 94.3 2.5 8.6E-05 37.0 25.6 146 35-197 175-333 (435)
313 1kb0_A Quinohemoprotein alcoho 93.3 4.4 0.00015 38.5 17.2 83 89-175 456-540 (677)
314 2hz6_A Endoplasmic reticulum t 92.3 0.35 1.2E-05 42.3 7.5 145 40-198 44-201 (369)
315 2ad6_A Methanol dehydrogenase 92.2 7.3 0.00025 36.1 17.9 85 88-176 442-528 (571)
316 1xip_A Nucleoporin NUP159; bet 91.7 3.9 0.00013 36.2 13.6 102 26-142 83-192 (388)
317 1tl2_A L10, protein (tachylect 91.5 0.41 1.4E-05 39.3 6.3 84 88-175 58-154 (236)
318 1flg_A Protein (quinoprotein e 90.5 4.1 0.00014 38.0 13.1 82 88-175 464-549 (582)
319 1w6s_A Methanol dehydrogenase 89.7 13 0.00045 34.7 18.6 49 215-268 453-503 (599)
320 2hz6_A Endoplasmic reticulum t 88.9 0.27 9.4E-06 43.0 3.5 22 119-141 47-68 (369)
321 2xe4_A Oligopeptidase B; hydro 88.7 17 0.00059 34.7 20.2 106 37-142 177-305 (751)
322 1k3i_A Galactose oxidase precu 85.4 12 0.0004 35.1 13.0 82 92-174 168-262 (656)
323 1yiq_A Quinohemoprotein alcoho 85.1 5.3 0.00018 38.0 10.4 82 89-175 454-538 (689)
324 4asc_A Kelch repeat and BTB do 82.1 20 0.0007 29.6 19.4 101 38-141 39-174 (315)
325 1kv9_A Type II quinohemoprotei 79.8 11 0.00039 35.5 10.4 81 90-175 438-521 (668)
326 3b7f_A Glycosyl hydrolase, BNR 77.9 25 0.00087 30.3 11.5 36 34-70 55-96 (394)
327 1k3i_A Galactose oxidase precu 77.7 28 0.00096 32.5 12.5 109 28-141 182-323 (656)
328 2zwa_A Leucine carboxyl methyl 71.7 69 0.0024 30.3 14.7 106 37-142 443-578 (695)
329 2xbg_A YCF48-like protein; pho 68.2 52 0.0018 27.5 20.4 131 35-175 123-270 (327)
330 3ii7_A Kelch-like protein 7; p 65.3 55 0.0019 26.7 21.4 97 42-141 53-178 (306)
331 2uvk_A YJHT; unknown function, 60.1 75 0.0026 26.5 17.0 90 38-129 13-126 (357)
332 2be1_A Serine/threonine-protei 50.9 43 0.0015 28.8 7.2 31 164-199 110-140 (339)
333 3ii7_A Kelch-like protein 7; p 50.1 1E+02 0.0035 25.0 16.1 126 42-174 99-256 (306)
334 2woz_A Kelch repeat and BTB do 50.1 1E+02 0.0036 25.2 11.6 96 43-141 108-231 (318)
335 2xbg_A YCF48-like protein; pho 48.3 1.2E+02 0.004 25.2 20.8 145 24-174 26-182 (327)
336 3s9j_A Member of DUF4221 famil 48.2 44 0.0015 29.1 6.9 74 118-196 36-116 (369)
337 3b7f_A Glycosyl hydrolase, BNR 48.1 1.3E+02 0.0044 25.6 15.9 34 37-70 180-214 (394)
338 2vpj_A Kelch-like protein 12; 46.1 1.2E+02 0.0039 24.5 22.0 98 41-141 59-184 (301)
339 3hx6_A Type 4 fimbrial biogene 45.9 80 0.0027 29.3 8.5 54 88-142 221-285 (570)
340 1xip_A Nucleoporin NUP159; bet 43.7 1.6E+02 0.0056 25.6 19.6 141 35-199 39-203 (388)
341 2xn4_A Kelch-like protein 2; s 41.3 1.4E+02 0.0047 24.1 21.9 95 44-141 61-182 (302)
342 2vpj_A Kelch-like protein 12; 39.9 1.5E+02 0.005 23.9 19.0 124 43-173 111-261 (301)
343 1sqj_A OXG-RCBH, oligoxylogluc 38.7 2.7E+02 0.0092 26.6 12.1 132 37-171 67-247 (789)
344 1zgk_A Kelch-like ECH-associat 38.4 1.6E+02 0.0054 23.9 15.7 96 43-141 120-240 (308)
345 2xn4_A Kelch-like protein 2; s 37.6 1.6E+02 0.0054 23.7 17.6 124 43-173 107-259 (302)
346 2woz_A Kelch repeat and BTB do 35.6 1.8E+02 0.0061 23.7 21.8 128 38-172 50-213 (318)
347 4asc_A Kelch repeat and BTB do 31.5 2.1E+02 0.0071 23.2 12.1 86 41-129 145-251 (315)
348 1zgk_A Kelch-like ECH-associat 25.4 2.7E+02 0.0091 22.5 19.8 84 55-141 90-193 (308)
349 2cn3_A Xyloglucanase, beta-1,4 24.1 4.5E+02 0.015 24.7 22.9 46 25-70 13-60 (737)
350 3a0f_A Xyloglucanase; beta-pro 23.0 4.9E+02 0.017 24.6 15.7 43 29-71 16-59 (763)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.93 E-value=1.4e-23 Score=184.31 Aligned_cols=149 Identities=36% Similarity=0.648 Sum_probs=123.9
Q ss_pred cceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCE
Q 024436 89 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGF 168 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l 168 (268)
.++|+++|+++++++.+...+..||||+++|||++|||+++.+++|++|++++...+..+.+.++++ |+||++|++|+|
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l 242 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHF 242 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCE
T ss_pred CceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCE
Confidence 3678888888788877777889999999999999999999999999999998765666677767777 999999999999
Q ss_pred EEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeC
Q 024436 169 WVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKD 248 (268)
Q Consensus 169 ~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~ 248 (268)
||+.+..+... + . .... +.+.+++++|+++..+..++|..+..++.+...+
T Consensus 243 ~va~~~~~~~~-------~----------~-----------~~~~-~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~ 293 (322)
T 2fp8_A 243 WVSSSEELDGN-------M----------H-----------GRVD-PKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHD 293 (322)
T ss_dssp EEEEEEETTSS-------T----------T-----------SCEE-EEEEEECTTSCEEEEEECCTTTTTSCCCEEEEET
T ss_pred EEEecCccccc-------c----------c-----------CCCc-cEEEEECCCCCEEEEEECCCCCccccceEEEEeC
Confidence 99998754210 0 0 0112 5689999999999999998876677788888889
Q ss_pred CEEEEeeCCCCeEEEEeCC
Q 024436 249 GNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 249 g~Lyv~s~~~~~v~~~~~~ 267 (268)
++|||++..+++|.+++++
T Consensus 294 g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 294 GLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TEEEEECSSCSEEEEEEC-
T ss_pred CEEEEeecCCCceEEEecc
Confidence 9999999999999999875
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.91 E-value=1e-22 Score=181.60 Aligned_cols=202 Identities=21% Similarity=0.343 Sum_probs=144.7
Q ss_pred CcceEEECC--CCC--EEEEEeCC--C--eEEEEeCCCCeEEEEEEcCCCC-------------C-eeEEE--ee-----
Q 024436 35 GPESLAFDA--LGE--GPYTGVSD--G--RIIKWHQDQRRWLHFARTSPNR-------------N-HISVI--LS----- 85 (268)
Q Consensus 35 ~P~gia~~~--dG~--~l~~~~~~--g--~I~~~~~~g~~~~~~~~~~~~~-------------~-~~~~~--~~----- 85 (268)
.|.||.+.+ +|+ ++++.... . .|++++++++.........+.+ . |+... ++
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 799999976 464 55555442 2 4777888776433222211111 1 22211 11
Q ss_pred ------cCCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC-CCCCceeEEEeCCCCCC
Q 024436 86 ------GDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT-SKAGTIEIVAQLPGFPD 158 (268)
Q Consensus 86 ------~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~-~~~g~~~~~~~l~g~Pd 158 (268)
..+.|+||++|++ +++.+.+++.+||||+|||||++|||+|+..++|++|+++. +.++..+.+ .+++.||
T Consensus 193 ~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PD 269 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVD 269 (355)
T ss_dssp HHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEE
T ss_pred cchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCc
Confidence 2357899999994 67888899999999999999999999999999999999973 345555666 6678999
Q ss_pred ceEEcC-CCCEEEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEEC----CCCCEEEEEEcC
Q 024436 159 NIKRSP-RGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRIS----EQGNVLEILEEI 233 (268)
Q Consensus 159 gia~d~-dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~G~~~~~~~~~ 233 (268)
|+++|+ +|++|+|+..+..+ |.++.+.. + ++ ..+.++. .++++.++|++
T Consensus 270 Gi~vD~e~G~lwva~~~~g~~----v~~~~P~~------~-------------~~--s~v~rI~~~~~~~~~v~~v~~d- 323 (355)
T 3sre_A 270 NISVDPVTGDLWVGCHPNGMR----IFFYDAEN------P-------------PG--SEVLRIQDILSEEPKVTVVYAE- 323 (355)
T ss_dssp EEEECTTTCCEEEEEESCHHH----HHSCCTTS------C-------------CC--EEEEEEECTTSSSCEEEEEEEE-
T ss_pred eEEEeCCCCcEEEEecCCceE----EEEECCCC------C-------------CC--CEEEEEEccCCCCcEEEEEEEc-
Confidence 999999 59999977544334 33444331 0 11 2455554 46889999998
Q ss_pred CCCceeceEEEEEeCCEEEEeeCCCCeEEEEeC
Q 024436 234 GRKMWRSISEVEEKDGNLWIGSVNMPYAGLYNY 266 (268)
Q Consensus 234 ~g~~~~~~s~~~~~~g~Lyv~s~~~~~v~~~~~ 266 (268)
+|+.++.+|+++.++++||+|++.++ +..|++
T Consensus 324 dG~~l~~~T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 324 NGTVLQGSTVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp CSSSCCSEEEEEEETTEEEEEESSSC-EEEEEC
T ss_pred CCCEEEeeEEEEEECCEEEEEEcCCC-ceeccC
Confidence 89999999999999999999999998 667764
No 3
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.81 E-value=8.6e-18 Score=145.75 Aligned_cols=172 Identities=17% Similarity=0.247 Sum_probs=124.4
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC--------------CCCC-eeEEEee---
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTS--------------PNRN-HISVILS--- 85 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~--------------~~~~-~~~~~~~--- 85 (268)
....+..+. .|.+++++++|+++++ . ++.|.++++++..+..+.... +++. |+.....
T Consensus 46 ~~~~~~~~~--~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~ 121 (297)
T 3g4e_A 46 QVQRVTMDA--PVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA 121 (297)
T ss_dssp CEEEEECSS--CEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB
T ss_pred cEEEEeCCC--ceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc
Confidence 344555553 7999999999995554 4 578999998755444443321 1112 3333211
Q ss_pred ----cCCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEcc--CCCCCceeEEEeC---CCC
Q 024436 86 ----GDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK--TSKAGTIEIVAQL---PGF 156 (268)
Q Consensus 86 ----~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~--~~~~g~~~~~~~l---~g~ 156 (268)
....+.||+++++ ++...+...+..||||+|+|||+.||++++..++|++|+++ ++.+...+.+.++ ++.
T Consensus 122 ~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~ 200 (297)
T 3g4e_A 122 PAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQI 200 (297)
T ss_dssp TTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCE
T ss_pred cccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCC
Confidence 1345799999997 77777778888999999999999999999999999999985 3333344556554 367
Q ss_pred CCceEEcCCCCEEEEEecCCCcceeeeEeeCcc-ceeeeeccccceeeee
Q 024436 157 PDNIKRSPRGGFWVGIHSRRKGISKLVLSFPWI-GNVLIKLPIDIVKIHS 205 (268)
Q Consensus 157 Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~~~-g~~l~~i~~~~~~~~~ 205 (268)
|+||++|++|+||++.+.++. |.++.+. |+++..++.|...+++
T Consensus 201 p~g~~~d~~G~lwva~~~~~~-----v~~~d~~tG~~~~~i~~p~~~~t~ 245 (297)
T 3g4e_A 201 PDGMCIDAEGKLWVACYNGGR-----VIRLDPVTGKRLQTVKLPVDKTTS 245 (297)
T ss_dssp EEEEEEBTTSCEEEEEETTTE-----EEEECTTTCCEEEEEECSSSBEEE
T ss_pred CCeeEECCCCCEEEEEcCCCE-----EEEEcCCCceEEEEEECCCCCceE
Confidence 999999999999999998764 7777664 8888888877544443
No 4
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.77 E-value=7.6e-17 Score=140.19 Aligned_cols=146 Identities=15% Similarity=0.139 Sum_probs=105.2
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc--------------CCCCC-eeEEE--ee-
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART--------------SPNRN-HISVI--LS- 85 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~--------------~~~~~-~~~~~--~~- 85 (268)
.++.+..+ ...|++++++++|+++++...+++|.+++++|+. ..+... .+++. |+.+. ..
T Consensus 77 ~~~~~~~~-~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~ 154 (305)
T 3dr2_A 77 TVDVLLDA-TAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLR 154 (305)
T ss_dssp CEEEEEES-CSCEEEEEECTTSCEEEEETTTTEEEEECTTSCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGS
T ss_pred CEEEEeCC-CCccceeeECCCCCEEEEECCCCEEEEECCCCCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcc
Confidence 34444444 3479999999999977777777899999998763 333211 01111 22110 00
Q ss_pred ----------cCCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCC-----cEEEEEEccCCCCCceeEE
Q 024436 86 ----------GDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTS-----CRILRYWLKTSKAGTIEIV 150 (268)
Q Consensus 86 ----------~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~-----~~I~~~~~~~~~~g~~~~~ 150 (268)
....+.|+++|+++++++.+. .+..|||++|+|||+.||++++.. ++|++|+++++.+...+.+
T Consensus 155 ~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~ 233 (305)
T 3dr2_A 155 KPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHF 233 (305)
T ss_dssp CGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEE
T ss_pred ccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEE
Confidence 012478999999878888777 888999999999999999999874 8999999975433344555
Q ss_pred EeC-CCCCCceEEcCCCCEEEEE
Q 024436 151 AQL-PGFPDNIKRSPRGGFWVGI 172 (268)
Q Consensus 151 ~~l-~g~Pdgia~d~dG~l~va~ 172 (268)
.+. ++.|+||++|++|+||++.
T Consensus 234 ~~~~~~~pdgi~~d~~G~lwv~~ 256 (305)
T 3dr2_A 234 ASVPDGLPDGFCVDRGGWLWSSS 256 (305)
T ss_dssp ECCSSSCCCSEEECTTSCEEECC
T ss_pred EECCCCCCCeEEECCCCCEEEec
Confidence 543 5789999999999999987
No 5
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.76 E-value=3.7e-16 Score=136.15 Aligned_cols=156 Identities=16% Similarity=0.170 Sum_probs=111.6
Q ss_pred CcceEEECCCCCEEEEEeCC--CeEEEEeC-CCCeEEEEEEcCCCC-Ce-e------EEEeecCCcceEEEEeCCCCeEE
Q 024436 35 GPESLAFDALGEGPYTGVSD--GRIIKWHQ-DQRRWLHFARTSPNR-NH-I------SVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~--g~I~~~~~-~g~~~~~~~~~~~~~-~~-~------~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
.|.+++++++|++|+++... .+|+++++ +|+ +..++.....+ +. . ..+..+...++||++|+++++.+
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT-VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe-EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 79999999999977777543 46999875 554 44444332111 00 0 12334456789999999865332
Q ss_pred Ee-----------ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC-CCCCceeEEEeCCCCCCceEEcCCCCEEEE
Q 024436 104 VL-----------LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT-SKAGTIEIVAQLPGFPDNIKRSPRGGFWVG 171 (268)
Q Consensus 104 ~~-----------~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~-~~~g~~~~~~~l~g~Pdgia~d~dG~l~va 171 (268)
.. ...+..|||| +|||++|||+++.+++|++|++++ +.++..+.+.++ ..|+||++|++|++||+
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEE
T ss_pred EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEE
Confidence 21 2456789999 899999999999999999999985 445556666665 47999999999999999
Q ss_pred EecCCCcceeeeEeeCcccee--eeecccc
Q 024436 172 IHSRRKGISKLVLSFPWIGNV--LIKLPID 199 (268)
Q Consensus 172 ~~~~~~~~~~~v~~~~~~g~~--l~~i~~~ 199 (268)
++.+++ |.++.+.|++ +..++.+
T Consensus 229 ~~~~~~-----V~~~~~~G~~~~~~~~~~~ 253 (306)
T 2p4o_A 229 THIYNS-----VVRIAPDRSTTIIAQAEQG 253 (306)
T ss_dssp CBTTCC-----EEEECTTCCEEEEECGGGT
T ss_pred eCCCCe-----EEEECCCCCEEEEeecccc
Confidence 998875 7777777876 3345544
No 6
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.75 E-value=7.3e-16 Score=132.78 Aligned_cols=143 Identities=15% Similarity=0.207 Sum_probs=103.7
Q ss_pred EEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeC-CCCeEEEEEEc--------------CCCCC-eeEEE--e--
Q 024436 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQ-DQRRWLHFART--------------SPNRN-HISVI--L-- 84 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~-~g~~~~~~~~~--------------~~~~~-~~~~~--~-- 84 (268)
++.+..+ ...|.+++++++|+++++...+++|.++++ +|+ +..+... .+++. |+.+. .
T Consensus 61 ~~~~~~~-~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~ 138 (296)
T 3e5z_A 61 LSPEMHP-SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE-WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGID 138 (296)
T ss_dssp EEEEESS-CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC-EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHH
T ss_pred eEEEECC-CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc-EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccc
Confidence 4555544 357999999999998777777799999998 565 3333211 11111 22211 0
Q ss_pred ---------ecCCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEcc-CCCC-CceeEEEe-
Q 024436 85 ---------SGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK-TSKA-GTIEIVAQ- 152 (268)
Q Consensus 85 ---------~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~-~~~~-g~~~~~~~- 152 (268)
.....+.|++++++ ++++.+...+..|||++++|||+.| ++++..++|++|+++ .+.+ +....+ .
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~ 215 (296)
T 3e5z_A 139 KPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TV 215 (296)
T ss_dssp CGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CC
T ss_pred cccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eC
Confidence 01134689999998 8888888889999999999999977 999999999999996 3333 334455 4
Q ss_pred CCCCCCceEEcCCCCEEEEE
Q 024436 153 LPGFPDNIKRSPRGGFWVGI 172 (268)
Q Consensus 153 l~g~Pdgia~d~dG~l~va~ 172 (268)
..+.|++|++|++|++|++.
T Consensus 216 ~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 216 EPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp SSSCCCSEEEBTTSCEEEEE
T ss_pred CCCCCCeEEECCCCCEEEEc
Confidence 34689999999999999998
No 7
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=2.8e-16 Score=138.08 Aligned_cols=221 Identities=12% Similarity=0.225 Sum_probs=145.3
Q ss_pred CCCcceEEECCCCCEEEEEeCC------------------------CeEEEEeCC-CCeEEEEEE----------cCCCC
Q 024436 33 AIGPESLAFDALGEGPYTGVSD------------------------GRIIKWHQD-QRRWLHFAR----------TSPNR 77 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~------------------------g~I~~~~~~-g~~~~~~~~----------~~~~~ 77 (268)
+..|.++|++++|++|+++..+ ++|++++++ |+....+.. ..+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 5689999999999988887766 479999986 654322210 01111
Q ss_pred CeeEEEeecCCcceEEEEeCCCC--eEEEe---------ecCCCCcceEEEcc-CCCEEEEEec-CCcEEEEEEccCCCC
Q 024436 78 NHISVILSGDKTGRLMKYDPATK--QVTVL---------LGNLSFPNGVALSE-DGNYILLAET-TSCRILRYWLKTSKA 144 (268)
Q Consensus 78 ~~~~~~~~~~~~g~v~~~d~~~~--~~~~~---------~~~~~~pnGia~sp-dg~~lyva~~-~~~~I~~~~~~~~~~ 144 (268)
. .++.+...++|+++|+++. .+..+ ...+..|++|+++| +| .|||+++ .+++|++|+.++..
T Consensus 103 ~---l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~~~~~g~~- 177 (329)
T 3fvz_A 103 N---YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQFSPSGKF- 177 (329)
T ss_dssp C---EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSCCEEEEECTTSCE-
T ss_pred C---EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCCCeEEEEcCCCCE-
Confidence 1 2334556788999998744 23333 23466899999999 56 5999997 79999999977532
Q ss_pred CceeEEEeC-------C---CCCCceEEcCC-CCEEEEEecCCCcceeeeEeeCcc-ceeeeeccccce--eeeee-cc-
Q 024436 145 GTIEIVAQL-------P---GFPDNIKRSPR-GGFWVGIHSRRKGISKLVLSFPWI-GNVLIKLPIDIV--KIHSS-LV- 208 (268)
Q Consensus 145 g~~~~~~~l-------~---g~Pdgia~d~d-G~l~va~~~~~~~~~~~v~~~~~~-g~~l~~i~~~~~--~~~~~-~~- 208 (268)
...+... + ..|.+|++|++ |+|||++...++ |.++... |+++..+..+.. .+..+ +.
T Consensus 178 --~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-----I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 178 --VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-----IQCFKTDTKEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp --EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-----EEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred --EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-----EEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence 2222210 1 24999999998 899999998874 7777765 888887743310 11100 00
Q ss_pred ------------ccCCCcEEEEEEC-CCCCEEEEEEcCCCCceeceEEEEE-eCCEEEEeeCCCCeEEEEeCC
Q 024436 209 ------------KLSGNGGMAMRIS-EQGNVLEILEEIGRKMWRSISEVEE-KDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 209 ------------~~~~~~~~~~~~~-~~G~~~~~~~~~~g~~~~~~s~~~~-~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
..... ..+..++ .+|+++..+.... ..+..+..++. .+|+||+++..+++|.+++++
T Consensus 251 g~~~~~~g~~~v~~~~~-~~v~~~~~~~g~~~~~~~~~~-~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 251 GFLFAVNGKPYFGDQEP-VQGFVMNFSSGEIIDVFKPVR-KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp TEEEEEECCCCTTCSCC-CCEEEEETTTCCEEEEECCSS-SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred CEEEEeCCCEEeccCCC-cEEEEEEcCCCeEEEEEcCCC-CccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 00011 2355565 4588888775322 23455666655 568999999999999999753
No 8
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.71 E-value=2.5e-15 Score=133.85 Aligned_cols=191 Identities=15% Similarity=0.092 Sum_probs=127.3
Q ss_pred cCCCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC---CCCC-----eeEEEeecCCcceEEEEeCCCC
Q 024436 30 IEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTS---PNRN-----HISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 30 ~~~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~---~~~~-----~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
+..+..|.++++++ ++.+|+++...++|+|++++|.....+...+ +.+- -...++.+...++|+++++++.
T Consensus 69 ~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 69 LNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence 34467899999996 5777778888999999999886433332211 1110 0112344556678999998844
Q ss_pred eEEEee-cCCCCcceEEEccCCCEEEEEecCC-cEEEEEEccCCCCCceeEEEe-CCCCCCceEEcC-CCCEEEEEecCC
Q 024436 101 QVTVLL-GNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSP-RGGFWVGIHSRR 176 (268)
Q Consensus 101 ~~~~~~-~~~~~pnGia~spdg~~lyva~~~~-~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~-dG~l~va~~~~~ 176 (268)
..+.+. ..+..|+||+++|+++.||++|+.. ++|++++++|.. ...+.. --..|+||++|+ +++||+++...+
T Consensus 149 ~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~ 225 (349)
T 3v64_C 149 HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH 225 (349)
T ss_dssp SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEESCCSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC---cEEEEECCCCCcceEEEeCCCCEEEEEECCCC
Confidence 344443 5788999999999888999999998 999999998732 333322 123699999996 567999998765
Q ss_pred CcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEEeeC
Q 024436 177 KGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSV 256 (268)
Q Consensus 177 ~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~ 256 (268)
. |.++ +.+|.....+-... +..+.+++..+++||++++
T Consensus 226 ~-----I~~~----------------------------------~~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~ 263 (349)
T 3v64_C 226 V-----IERA----------------------------------NLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDW 263 (349)
T ss_dssp E-----EEEE----------------------------------ETTSCSCEEEECSS---CSSEEEEEEETTEEEEEET
T ss_pred E-----EEEE----------------------------------eCCCCceEEEEeCC---CCCceEEEEECCEEEEecC
Confidence 2 3333 23332222221111 3445565557788888888
Q ss_pred CCCeEEEEe
Q 024436 257 NMPYAGLYN 265 (268)
Q Consensus 257 ~~~~v~~~~ 265 (268)
.+++|.+++
T Consensus 264 ~~~~V~~~~ 272 (349)
T 3v64_C 264 HTKSINSAN 272 (349)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEEE
Confidence 888888886
No 9
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=8e-15 Score=125.34 Aligned_cols=223 Identities=16% Similarity=0.204 Sum_probs=142.8
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCC--C---CCee--------EEEeecC-CcceEEEEeCC
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSP--N---RNHI--------SVILSGD-KTGRLMKYDPA 98 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~--~---~~~~--------~~~~~~~-~~g~v~~~d~~ 98 (268)
+..|.+++++++|++++++..+++|.+++++++....+...+. . .+.. ..++... ..+.|+++|++
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~ 108 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY 108 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred cCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC
Confidence 5689999999999988888889999999998875444422110 0 0000 1122222 25788888876
Q ss_pred CCeEEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC--CCCCCceEEcCCCCEEEEEecC
Q 024436 99 TKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL--PGFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 99 ~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l--~g~Pdgia~d~dG~l~va~~~~ 175 (268)
+..+..+. .....|++|+++|+|+ |||++..+++|++|+.++.. ...+... ...|.+|++|++|++|++....
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~---~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 184 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNV---LHKFGCSKHLEFPNGVVVNDKQEIFISDNRA 184 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSCE---EEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred CcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCE---EEEeCCCCccCCcEEEEECCCCCEEEEECCC
Confidence 33333332 3456899999999996 99999999999999976521 2233211 1369999999999999999876
Q ss_pred CCcceeeeEeeCccceeeeecccc--ceeeee-ecc-------ccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEE-
Q 024436 176 RKGISKLVLSFPWIGNVLIKLPID--IVKIHS-SLV-------KLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEV- 244 (268)
Q Consensus 176 ~~~~~~~v~~~~~~g~~l~~i~~~--~~~~~~-~~~-------~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~- 244 (268)
+. |.++...++.+..+... ...+.. ++. ........+.+++++|+.+..+..... ...+..+
T Consensus 185 ~~-----i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~--~~~~~~i~ 257 (286)
T 1q7f_A 185 HC-----VKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVK--HAQCFDVA 257 (286)
T ss_dssp TE-----EEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSC--CSCEEEEE
T ss_pred CE-----EEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCC--CCcceeEE
Confidence 54 66777777776665432 111111 111 011110156677777777776654321 1223344
Q ss_pred EEeCCEEEEeeCCCCeEEEEeCC
Q 024436 245 EEKDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 245 ~~~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
...+|+||+++. +++|.++++.
T Consensus 258 ~~~~g~l~vs~~-~~~v~v~~~~ 279 (286)
T 1q7f_A 258 LMDDGSVVLASK-DYRLYIYRYV 279 (286)
T ss_dssp EETTTEEEEEET-TTEEEEEECS
T ss_pred ECCCCcEEEECC-CCeEEEEEcc
Confidence 345789999975 7899988764
No 10
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.70 E-value=3.9e-15 Score=134.33 Aligned_cols=189 Identities=14% Similarity=0.065 Sum_probs=127.7
Q ss_pred CCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC---CCCC-----eeEEEeecCCcceEEEEeCCCCeE
Q 024436 32 GAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTS---PNRN-----HISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 32 ~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~---~~~~-----~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
.+..|.++++++ ++.+|+++...++|++++++|.....+...+ |.+- -...++.+...++|+++++++...
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 467899999996 5777778888999999999987544443221 1110 011234455667899988874443
Q ss_pred EEe-ecCCCCcceEEEccCCCEEEEEecCC-cEEEEEEccCCCCCceeEEEe-CCCCCCceEEcC-CCCEEEEEecCCCc
Q 024436 103 TVL-LGNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSP-RGGFWVGIHSRRKG 178 (268)
Q Consensus 103 ~~~-~~~~~~pnGia~spdg~~lyva~~~~-~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~-dG~l~va~~~~~~~ 178 (268)
+.+ ..++..|+||+++|+++.||+++... ++|++++++|.. ...+.. .-..|.||++|+ +++||+++...+.
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~- 269 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV- 269 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE-
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE-
Confidence 443 45778999999999888999999988 999999998742 333332 123699999996 5679999976652
Q ss_pred ceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEEeeCCC
Q 024436 179 ISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNM 258 (268)
Q Consensus 179 ~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~~~ 258 (268)
|.++ +.+|.....+... + +..+.+++..+++||++++.+
T Consensus 270 ----I~~~----------------------------------d~dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~ 308 (386)
T 3v65_B 270 ----IERA----------------------------------NLDGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHT 308 (386)
T ss_dssp ----EEEE----------------------------------CTTSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTT
T ss_pred ----EEEE----------------------------------eCCCCeeEEEEEC-C--CCCceEEEEECCEEEEeeCCC
Confidence 3333 3333222222211 1 344556655778888888888
Q ss_pred CeEEEEe
Q 024436 259 PYAGLYN 265 (268)
Q Consensus 259 ~~v~~~~ 265 (268)
++|.+++
T Consensus 309 ~~V~~~~ 315 (386)
T 3v65_B 309 KSINSAN 315 (386)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 8888886
No 11
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.70 E-value=5e-15 Score=126.09 Aligned_cols=188 Identities=13% Similarity=0.048 Sum_probs=122.5
Q ss_pred CCcceEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCe--------eEEEeecCCcceEEEEeCCCCeEEE
Q 024436 34 IGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNH--------ISVILSGDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 34 ~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~g~v~~~d~~~~~~~~ 104 (268)
..|++++++++ +.+|+++..+++|.+++++|.....+....-..+. -..++.+...++|++++.++...+.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 36899999995 56666777789999999988643333211101110 0122344556788888887433333
Q ss_pred ee-cCCCCcceEEEccCCCEEEEEecC--CcEEEEEEccCCCCCceeEEEeC-CCCCCceEEcCCC-CEEEEEecCCCcc
Q 024436 105 LL-GNLSFPNGVALSEDGNYILLAETT--SCRILRYWLKTSKAGTIEIVAQL-PGFPDNIKRSPRG-GFWVGIHSRRKGI 179 (268)
Q Consensus 105 ~~-~~~~~pnGia~spdg~~lyva~~~--~~~I~~~~~~~~~~g~~~~~~~l-~g~Pdgia~d~dG-~l~va~~~~~~~~ 179 (268)
+. .++..|+||+++|+++.||+++.. +++|+++++++.. .+.+... ...|.||++|+++ +||+++...+.
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~---~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~-- 190 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN---RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR-- 190 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC---CEEEECTTCSCEEEEEEETTTTEEEEEETTTTE--
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC---cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE--
Confidence 33 456889999999987799999987 6899999998632 3334322 2479999999975 69999987753
Q ss_pred eeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEEeeCCCC
Q 024436 180 SKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMP 259 (268)
Q Consensus 180 ~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~~~~ 259 (268)
|.++...+ .....+... ...+..++..+++||+++..++
T Consensus 191 ---I~~~~~~g----------------------------------~~~~~~~~~----~~~P~gi~~d~~~lyva~~~~~ 229 (267)
T 1npe_A 191 ---AECLNPAQ----------------------------------PGRRKVLEG----LQYPFAVTSYGKNLYYTDWKTN 229 (267)
T ss_dssp ---EEEEETTE----------------------------------EEEEEEEEC----CCSEEEEEEETTEEEEEETTTT
T ss_pred ---EEEEecCC----------------------------------CceEEEecC----CCCceEEEEeCCEEEEEECCCC
Confidence 44433222 111111111 1223455556888999999999
Q ss_pred eEEEEeCC
Q 024436 260 YAGLYNYS 267 (268)
Q Consensus 260 ~v~~~~~~ 267 (268)
+|.+++.+
T Consensus 230 ~v~~~d~~ 237 (267)
T 1npe_A 230 SVIAMDLA 237 (267)
T ss_dssp EEEEEETT
T ss_pred eEEEEeCC
Confidence 99988875
No 12
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.69 E-value=1e-14 Score=128.02 Aligned_cols=193 Identities=11% Similarity=0.044 Sum_probs=124.5
Q ss_pred CCCCCcceEEECCC-CCEEEEEeCCCeEEEEeCCC----CeEEEEEEcCCCCCe--------eEEEeecCCcceEEEEeC
Q 024436 31 EGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQ----RRWLHFARTSPNRNH--------ISVILSGDKTGRLMKYDP 97 (268)
Q Consensus 31 ~~~~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g----~~~~~~~~~~~~~~~--------~~~~~~~~~~g~v~~~d~ 97 (268)
+.+..|++++++++ +.+|+++..+++|++++++| .....+....-..+. -..++.+...++|.++++
T Consensus 27 ~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 34668999999985 56777788889999999887 221222111101110 012334456788999998
Q ss_pred CCCeEEEee-cCCCCcceEEEccCCCEEEEEecCC-cEEEEEEccCCCCCceeEEEe-CCCCCCceEEcCC-CCEEEEEe
Q 024436 98 ATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPR-GGFWVGIH 173 (268)
Q Consensus 98 ~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~-~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~d-G~l~va~~ 173 (268)
++...+.+. ..+..|+||+++|+++.||+++... ++|++++++|.. .+.+.. --..|.||++|++ ++||+++.
T Consensus 107 ~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC---eEEEEECCCCCceEEEEeccCCEEEEEEC
Confidence 854455444 4678999999999888999999876 899999998732 344432 1247999999975 57999997
Q ss_pred cCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEE
Q 024436 174 SRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWI 253 (268)
Q Consensus 174 ~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv 253 (268)
..+. |.++ +.+|....++.... ..+..+.+++..+++||+
T Consensus 184 ~~~~-----I~~~----------------------------------d~dg~~~~~~~~~~-~~~~~P~giav~~~~ly~ 223 (316)
T 1ijq_A 184 KLHS-----ISSI----------------------------------DVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFW 223 (316)
T ss_dssp TTTE-----EEEE----------------------------------ETTSCSCEEEEECT-TTTSSEEEEEEETTEEEE
T ss_pred CCCe-----EEEE----------------------------------ecCCCceEEEeecC-CccCCcEEEEEECCEEEE
Confidence 6652 3333 33332222222111 123445566666788888
Q ss_pred eeCCCCeEEEEeC
Q 024436 254 GSVNMPYAGLYNY 266 (268)
Q Consensus 254 ~s~~~~~v~~~~~ 266 (268)
+++.+++|.+++.
T Consensus 224 ~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 224 TDIINEAIFSANR 236 (316)
T ss_dssp EETTTTEEEEEET
T ss_pred EECCCCeEEEEeC
Confidence 8888888888875
No 13
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.68 E-value=1.1e-14 Score=133.30 Aligned_cols=210 Identities=12% Similarity=0.059 Sum_probs=131.6
Q ss_pred CCCCcceEEECCCCCEEEEEeCC----CeEEEEeCCCCeE--EEEEEc-CCCC----C-eeEEEeecCCcceEEEEeCCC
Q 024436 32 GAIGPESLAFDALGEGPYTGVSD----GRIIKWHQDQRRW--LHFART-SPNR----N-HISVILSGDKTGRLMKYDPAT 99 (268)
Q Consensus 32 ~~~~P~gia~~~dG~~l~~~~~~----g~I~~~~~~g~~~--~~~~~~-~~~~----~-~~~~~~~~~~~g~v~~~d~~~ 99 (268)
.+..|.+++++++|++|+++... ..++.+.+++... ...+.. .|.. + -...++.+..+++|+++|+++
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~ 259 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT 259 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC
Confidence 46789999999999966666532 3466666554321 122211 1111 0 011233556778999999987
Q ss_pred CeE-EEee--cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC--CCCCceeEEEeC---C------------CCCCc
Q 024436 100 KQV-TVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT--SKAGTIEIVAQL---P------------GFPDN 159 (268)
Q Consensus 100 ~~~-~~~~--~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~--~~~g~~~~~~~l---~------------g~Pdg 159 (268)
+++ +.+. .....+++|+++|||++|||+++.+++|+++++++ +.+.....++.. . ..|.|
T Consensus 260 g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~g 339 (433)
T 4hw6_A 260 GTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQ 339 (433)
T ss_dssp CCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEE
T ss_pred CeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCcc
Confidence 776 4333 23355678999999999999999999999999873 223323333321 1 24888
Q ss_pred eEE---------cCCCCEEEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEE
Q 024436 160 IKR---------SPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEIL 230 (268)
Q Consensus 160 ia~---------d~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 230 (268)
|++ |++|+|||+++.+++ |.++.++|++....-.+.. + .. +. .+|.
T Consensus 340 iav~~n~~y~~dd~~g~lyvaD~~n~~-----I~~~~~~G~v~t~~G~g~~----~-----~~-G~-----~dG~----- 394 (433)
T 4hw6_A 340 GIFVKNEAYAGEEDEYDFYFCDRDSHT-----VRVLTPEGRVTTYAGRGNS----R-----EW-GY-----VDGE----- 394 (433)
T ss_dssp EEEEECGGGTTSSCCEEEEEEETTTTE-----EEEECTTSEEEEEECCCTT----C-----SS-CC-----BCEE-----
T ss_pred EEEEccccccccCCCCcEEEEECCCCE-----EEEECCCCCEEEEEeCCCC----C-----cc-cc-----CCCc-----
Confidence 999 999999999999875 6666666644321111100 0 00 00 0010
Q ss_pred EcCCCCceeceEEEEEe--CCEEEEeeCCCCeEEEEeCC
Q 024436 231 EEIGRKMWRSISEVEEK--DGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 231 ~~~~g~~~~~~s~~~~~--~g~Lyv~s~~~~~v~~~~~~ 267 (268)
.+.-..+..+.+++.. +|.|||++..+++|.+|+++
T Consensus 395 -~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 395 -LRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp -TTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred -cccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 0001235667777665 79999999999999999875
No 14
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1.5e-14 Score=132.44 Aligned_cols=215 Identities=14% Similarity=0.127 Sum_probs=132.0
Q ss_pred CEEEEecCCCCCcceEEECCCCC-EEEEEeCCC----eEEEEeCCCCeE--EEEEEc--------CCCCCeeEEEeecCC
Q 024436 24 GVVQYQIEGAIGPESLAFDALGE-GPYTGVSDG----RIIKWHQDQRRW--LHFART--------SPNRNHISVILSGDK 88 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~-~l~~~~~~g----~I~~~~~~g~~~--~~~~~~--------~~~~~~~~~~~~~~~ 88 (268)
.+..+.. .+..|.+|+++++|+ +|+++..++ .++.++++|... ..+... .+...+ .++.+..
T Consensus 170 ~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~--lyv~d~~ 246 (430)
T 3tc9_A 170 YVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGE--LYFNSWN 246 (430)
T ss_dssp EEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCC--EEEEETT
T ss_pred EEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCE--EEEEECC
Confidence 3444433 456899999999999 555554332 566777776532 222211 111111 2334557
Q ss_pred cceEEEEeCCCCeEEEee--cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCC--CCCceeEEEeCC----------
Q 024436 89 TGRLMKYDPATKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS--KAGTIEIVAQLP---------- 154 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~--~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~--~~g~~~~~~~l~---------- 154 (268)
.++|++++++++....+. .....|+||+++|+|++|||++..+++|++|+.++. .+.....+...+
T Consensus 247 ~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~ 326 (430)
T 3tc9_A 247 AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVG 326 (430)
T ss_dssp TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEG
T ss_pred CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCC
Confidence 789999999877653332 334679999999999999999999999999998852 222223332210
Q ss_pred -----CCCC-ceEE--------cCCCCEEEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEE
Q 024436 155 -----GFPD-NIKR--------SPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRI 220 (268)
Q Consensus 155 -----g~Pd-gia~--------d~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 220 (268)
..|. |+++ |++|+||++++.+++ |.++.++|++....-.+. ....+.
T Consensus 327 ~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~-----I~~i~~~G~v~~~~g~g~----------~~~~G~---- 387 (430)
T 3tc9_A 327 KKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC-----IRILTPQGRVTTFAGRGS----------NGTSGY---- 387 (430)
T ss_dssp GGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE-----EEEECTTSEEEEEEECCT----------TSSSSC----
T ss_pred cceEeCCCcceEEEccccccccCCCCeEEEEECCCcE-----EEEECCCCcEEEEEeCCC----------CCCCcc----
Confidence 2477 8888 567999999998774 555555554322111100 000000
Q ss_pred CCCCCEEEEEEcCCCCceeceEEEEEe--CCEEEEeeCCCCeEEEEeCC
Q 024436 221 SEQGNVLEILEEIGRKMWRSISEVEEK--DGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 221 ~~~G~~~~~~~~~~g~~~~~~s~~~~~--~g~Lyv~s~~~~~v~~~~~~ 267 (268)
.+|. ...-..+..+..++.. ++.|||++..+++|-+++.+
T Consensus 388 -~dG~------~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 388 -NDGD------LRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp -BCEE------TTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred -cCCC------chhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 0000 0000125567777664 68999999999999999865
No 15
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.67 E-value=4.9e-14 Score=128.07 Aligned_cols=223 Identities=13% Similarity=0.064 Sum_probs=138.8
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCC--------CCCeeEEEeecC-CcceEEEEeCCCCeE-
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSP--------NRNHISVILSGD-KTGRLMKYDPATKQV- 102 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~--------~~~~~~~~~~~~-~~g~v~~~d~~~~~~- 102 (268)
+..|.+++++++|++|+++..+++|.++++++..+..+..... .+.++ +..+. ..++|++++++++..
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l--~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRV--YSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEE--EEEBSSTTCEEEEEEGGGTTCE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcE--EEEecCCCceEEEEEcCCCcee
Confidence 6789999999999988888888999999998765555443321 11212 22222 223899999875443
Q ss_pred EEe----ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC----C--CCCC-ceEEcC-CCCEEE
Q 024436 103 TVL----LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL----P--GFPD-NIKRSP-RGGFWV 170 (268)
Q Consensus 103 ~~~----~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l----~--g~Pd-gia~d~-dG~l~v 170 (268)
..+ ......|++++++|++..||+++. +++|++|+.+++. ...+... . ..|. +|++|+ +|+||+
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~---~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQE---VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCC---EEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCC---EEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 233 226678999999996558999875 7899999997532 3344221 1 1256 999999 578999
Q ss_pred EEecCCCcceeeeEeeCccceeeeecccc--------------ceeeee-ecc-------ccC-CCcEEEEEEC-CCCCE
Q 024436 171 GIHSRRKGISKLVLSFPWIGNVLIKLPID--------------IVKIHS-SLV-------KLS-GNGGMAMRIS-EQGNV 226 (268)
Q Consensus 171 a~~~~~~~~~~~v~~~~~~g~~l~~i~~~--------------~~~~~~-~~~-------~~~-~~~~~~~~~~-~~G~~ 226 (268)
++...+. |.++..+++.......+ ...+.. ++. ... .. ..+.+++ ++|++
T Consensus 284 ~d~~~~~-----I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~-~~I~~~~~~~G~v 357 (409)
T 3hrp_A 284 SDQNLSS-----VYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG-YCLRKLDILDGYV 357 (409)
T ss_dssp EETTTTE-----EEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT-CEEEEEETTTTEE
T ss_pred EeCCCCE-----EEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC-CEEEEEECCCCEE
Confidence 9988774 66777666532211110 000110 110 011 11 3455555 45554
Q ss_pred EEEEEcC------CC----CceeceEEEEE-eCCEEEEeeCCCCeEEEEeCC
Q 024436 227 LEILEEI------GR----KMWRSISEVEE-KDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 227 ~~~~~~~------~g----~~~~~~s~~~~-~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
......+ +| ..+..+..++. .+|+|||++..+++|.+++++
T Consensus 358 ~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 358 STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 4333321 11 11455777765 459999999999999999864
No 16
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.66 E-value=2.3e-14 Score=137.04 Aligned_cols=196 Identities=13% Similarity=0.093 Sum_probs=133.0
Q ss_pred EEEecCCCCCcceEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEEEEcC---CCCC---e--eEEEeecCCcceEEEEe
Q 024436 26 VQYQIEGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTS---PNRN---H--ISVILSGDKTGRLMKYD 96 (268)
Q Consensus 26 ~~i~~~~~~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~~~~~~~~~---~~~~---~--~~~~~~~~~~g~v~~~d 96 (268)
..++++++..|.+|+++++ +.+|+++..+++|.|++++|.....+...+ |.+- + -..+..+...++|.+++
T Consensus 29 ~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~ 108 (628)
T 4a0p_A 29 VAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSK 108 (628)
T ss_dssp EECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEe
Confidence 3445556678999999985 666677888999999999886444433221 1110 0 11234556778999999
Q ss_pred CCCCeEEEee-cCCCCcceEEEccCCCEEEEEecC-CcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCC-CCEEEEEe
Q 024436 97 PATKQVTVLL-GNLSFPNGVALSEDGNYILLAETT-SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPR-GGFWVGIH 173 (268)
Q Consensus 97 ~~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~-~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~d-G~l~va~~ 173 (268)
+++...+.+. ..+..|++|+++|.+..||++|.. .++|++++++|.. ...+.+--..|.||++|++ ++||+++.
T Consensus 109 ~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~---~~~l~~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 109 LDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE---RTTLVPNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp TTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEEECSCSSEEEEEEETTTTEEEEEET
T ss_pred cCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc---eEEEECCCCCcceEEEccccCEEEEEEC
Confidence 8854444554 788999999999976789999976 6899999999743 3444432247999999996 57999997
Q ss_pred cCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEE
Q 024436 174 SRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWI 253 (268)
Q Consensus 174 ~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv 253 (268)
..+. |. +++.+|.-.+++.+. ++.+.+++..+++||+
T Consensus 186 ~~~~-----I~----------------------------------~~d~dG~~~~v~~~~----l~~P~glav~~~~ly~ 222 (628)
T 4a0p_A 186 DTNL-----IE----------------------------------SSNMLGLNREVIADD----LPHPFGLTQYQDYIYW 222 (628)
T ss_dssp TTTE-----EE----------------------------------EEETTSCSCEEEEEC----CSCEEEEEEETTEEEE
T ss_pred CCCE-----EE----------------------------------EEcCCCCceEEeecc----CCCceEEEEECCEEEE
Confidence 6652 32 223333222233221 3445566667788999
Q ss_pred eeCCCCeEEEEeCC
Q 024436 254 GSVNMPYAGLYNYS 267 (268)
Q Consensus 254 ~s~~~~~v~~~~~~ 267 (268)
+++.+++|.+++..
T Consensus 223 tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 223 TDWSRRSIERANKT 236 (628)
T ss_dssp EETTTTEEEEEETT
T ss_pred ecCCCCEEEEEECC
Confidence 99988998888753
No 17
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.65 E-value=1.6e-14 Score=122.92 Aligned_cols=157 Identities=15% Similarity=0.124 Sum_probs=110.9
Q ss_pred CCCCcceEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEEEEcC----------CCCCeeEEEeecC--CcceEEEEeCC
Q 024436 32 GAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTS----------PNRNHISVILSGD--KTGRLMKYDPA 98 (268)
Q Consensus 32 ~~~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~--~~g~v~~~d~~ 98 (268)
++..|++++++++ +.+|+++...++|.+++.+|+....+.... +...+++ +.+. ..++|++++++
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~ly--v~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLY--WTDWNRDNPKIETSHMD 154 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEE--EEECCSSSCEEEEEETT
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEE--EEECCCCCcEEEEEecC
Confidence 4568999999996 566666777899999999876433322111 1112222 2222 25789999887
Q ss_pred CCeEEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCCC
Q 024436 99 TKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRK 177 (268)
Q Consensus 99 ~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~ 177 (268)
+...+.+. ..+..|+||++++++++||++++..++|+++++++. ....+......|+||++| +++||++++.+++
T Consensus 155 g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~ 230 (267)
T 1npe_A 155 GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP---GRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNS 230 (267)
T ss_dssp SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE---EEEEEEECCCSEEEEEEE-TTEEEEEETTTTE
T ss_pred CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC---ceEEEecCCCCceEEEEe-CCEEEEEECCCCe
Confidence 43334443 567889999999998899999999999999999852 233333333579999998 6899999998874
Q ss_pred cceeeeEeeCc-cceeeeecccc
Q 024436 178 GISKLVLSFPW-IGNVLIKLPID 199 (268)
Q Consensus 178 ~~~~~v~~~~~-~g~~l~~i~~~ 199 (268)
|.++.. +|+.+..++.+
T Consensus 231 -----v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 231 -----VIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp -----EEEEETTTTEEEEEECCS
T ss_pred -----EEEEeCCCCCceEEEccc
Confidence 666654 58888888764
No 18
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.65 E-value=3.2e-14 Score=128.95 Aligned_cols=193 Identities=11% Similarity=0.049 Sum_probs=124.5
Q ss_pred CCCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCe----EEEEEEcCCCCCe--------eEEEeecCCcceEEEEeC
Q 024436 31 EGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRR----WLHFARTSPNRNH--------ISVILSGDKTGRLMKYDP 97 (268)
Q Consensus 31 ~~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~----~~~~~~~~~~~~~--------~~~~~~~~~~g~v~~~d~ 97 (268)
+.+..|.++++++ ++.+|+++...++|++++++|.. ...+.......+. -..++.+...++|.++++
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 3467899999998 56777788889999999988721 1222111111110 112345566788999998
Q ss_pred CCCeEEEee-cCCCCcceEEEccCCCEEEEEecCC-cEEEEEEccCCCCCceeEEEe-CCCCCCceEEcCC-CCEEEEEe
Q 024436 98 ATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPR-GGFWVGIH 173 (268)
Q Consensus 98 ~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~-~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~d-G~l~va~~ 173 (268)
++...+.+. ..+..|+||+++|.++.||++|... ++|++++++|.. ...+.. .-..|.||++|++ ++||+++.
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~---~~~~~~~~l~~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc---cEEEEECCCCceEEEEEEeCCCEEEEEEC
Confidence 855444444 5788899999999878999999764 899999998742 333332 1147999999964 57999987
Q ss_pred cCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEE
Q 024436 174 SRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWI 253 (268)
Q Consensus 174 ~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv 253 (268)
..+. |.+ ++.+|....++.... ..+..+.+++..+++||+
T Consensus 266 ~~~~-----I~~----------------------------------~d~dG~~~~~~~~~~-~~l~~P~gl~v~~~~lyw 305 (400)
T 3p5b_L 266 KLHS-----ISS----------------------------------IDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFW 305 (400)
T ss_dssp TTTE-----EEE----------------------------------EETTSCCCEEEEECS-STTSSEEEEEEETTEEEE
T ss_pred CCCE-----EEE----------------------------------EeCCCCccEEEEeCC-CCCCCCEEEEEeCCEEEE
Confidence 6652 333 333333222222211 124455666667788888
Q ss_pred eeCCCCeEEEEeC
Q 024436 254 GSVNMPYAGLYNY 266 (268)
Q Consensus 254 ~s~~~~~v~~~~~ 266 (268)
+++.+++|.+++.
T Consensus 306 td~~~~~V~~~~~ 318 (400)
T 3p5b_L 306 TDIINEAIFSANR 318 (400)
T ss_dssp EESSSCSEEEEES
T ss_pred ecCCCCeEEEEEc
Confidence 8888888888763
No 19
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.64 E-value=2.2e-14 Score=126.18 Aligned_cols=189 Identities=12% Similarity=0.040 Sum_probs=123.2
Q ss_pred CCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeE--EEEEE--cCCCCC-----eeEEEeecCCcceEEEEeCCCCeE
Q 024436 33 AIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRW--LHFAR--TSPNRN-----HISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 33 ~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~--~~~~~--~~~~~~-----~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
+..|.++++++ ++.+|+++...++|.|++++|... ..... ..+.+- -...++.+...++|.++++++...
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 34588899998 577888888899999999887521 11111 111110 011234555678999999884444
Q ss_pred EEee-cCCCCcceEEEccCCCEEEEEecC-CcEEEEEEccCCCCCceeEEEe-CCCCCCceEEcC-CCCEEEEEecCCCc
Q 024436 103 TVLL-GNLSFPNGVALSEDGNYILLAETT-SCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSP-RGGFWVGIHSRRKG 178 (268)
Q Consensus 103 ~~~~-~~~~~pnGia~spdg~~lyva~~~-~~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~-dG~l~va~~~~~~~ 178 (268)
+.+. ..+..|+||+++|+++.||+++.. .++|++++++|.. ...+.. --..|.||++|+ +++||+++...+.
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~- 189 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF- 189 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEEEECCCCCccEEEEeccCCEEEEEECCCCE-
Confidence 4444 778899999999987799999975 6899999998732 333332 113699999998 5679999977652
Q ss_pred ceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEEeeCCC
Q 024436 179 ISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNM 258 (268)
Q Consensus 179 ~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~~~ 258 (268)
|.++. .+|....++... .+..+.+++..+++||++.+.+
T Consensus 190 ----I~~~d----------------------------------~dG~~~~~~~~~---~~~~P~glav~~~~lywtd~~~ 228 (318)
T 3sov_A 190 ----IHKSN----------------------------------LDGTNRQAVVKG---SLPHPFALTLFEDILYWTDWST 228 (318)
T ss_dssp ----EEEEE----------------------------------TTSCSCEEEECS---CCSCEEEEEEETTEEEEEETTT
T ss_pred ----EEEEc----------------------------------CCCCceEEEecC---CCCCceEEEEeCCEEEEEecCC
Confidence 33333 232222222211 1334455555677788888888
Q ss_pred CeEEEEeC
Q 024436 259 PYAGLYNY 266 (268)
Q Consensus 259 ~~v~~~~~ 266 (268)
++|.+++.
T Consensus 229 ~~V~~~~~ 236 (318)
T 3sov_A 229 HSILACNK 236 (318)
T ss_dssp TEEEEEET
T ss_pred CeEEEEEC
Confidence 88877765
No 20
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.64 E-value=2.7e-14 Score=126.32 Aligned_cols=155 Identities=13% Similarity=0.057 Sum_probs=104.7
Q ss_pred CCCCcceEEECCCCCEEEEEeC-----CCeEEEEeCC-CCeEEEEEEcC---CCCCe----------eEEEeecC---Cc
Q 024436 32 GAIGPESLAFDALGEGPYTGVS-----DGRIIKWHQD-QRRWLHFARTS---PNRNH----------ISVILSGD---KT 89 (268)
Q Consensus 32 ~~~~P~gia~~~dG~~l~~~~~-----~g~I~~~~~~-g~~~~~~~~~~---~~~~~----------~~~~~~~~---~~ 89 (268)
.+..|.+++++++|++|+++.. .++|++++++ |+....+.... ....+ ...++++. ..
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence 3578999999999998888765 6899999986 44333332110 00000 01223433 56
Q ss_pred ceEEEEeCCCCeEEEeecC------------------------------CCCcceEEEccCCCEEEEEecCCcEEEEEEc
Q 024436 90 GRLMKYDPATKQVTVLLGN------------------------------LSFPNGVALSEDGNYILLAETTSCRILRYWL 139 (268)
Q Consensus 90 g~v~~~d~~~~~~~~~~~~------------------------------~~~pnGia~spdg~~lyva~~~~~~I~~~~~ 139 (268)
+.|+++|+++++......+ ...||||+++|||++||++++..++|++++.
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEH
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEH
Confidence 7899999887766554322 0247999999999999999999999999986
Q ss_pred c---CCCCCce------eEEEeCCCCCCceEEcCCCCEEEEEecCCCcceeeeEeeCc-ccee
Q 024436 140 K---TSKAGTI------EIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPW-IGNV 192 (268)
Q Consensus 140 ~---~~~~g~~------~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~~-~g~~ 192 (268)
+ .+.++.. ..... .+.|+||++|++|++|++++..+. |.++.+ +|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~g~-~g~pdgia~d~~G~l~va~~~~~~-----V~~~d~~~G~~ 281 (343)
T 2qe8_A 225 ADLSNLQLTDAELGSKIERYSE-KPICDGISIDKDHNIYVGDLAHSA-----IGVITSADRAY 281 (343)
T ss_dssp HHHTCTTCCHHHHHTTCEEEEE-CCSCSCEEECTTCCEEEEEGGGTE-----EEEEETTTTEE
T ss_pred HHhcCCCCChhhhhcceEeccc-CCCCceEEECCCCCEEEEccCCCe-----EEEEECCCCCE
Confidence 4 1121111 11222 247999999999999999998764 666665 6654
No 21
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.64 E-value=9.8e-14 Score=120.97 Aligned_cols=170 Identities=19% Similarity=0.232 Sum_probs=112.4
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCC----CeEEEEeCCCCeEEEEEE-c-----------CCCCC-eeEEEe--
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSD----GRIIKWHQDQRRWLHFAR-T-----------SPNRN-HISVIL-- 84 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~----g~I~~~~~~g~~~~~~~~-~-----------~~~~~-~~~~~~-- 84 (268)
.+..+.......|.+++++++|+++++...+ +.|+++++++.....+.. . .+++. |+....
T Consensus 77 ~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 156 (333)
T 2dg1_A 77 EIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGY 156 (333)
T ss_dssp CEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCB
T ss_pred cEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccc
Confidence 3343332323579999999999987777666 799999987654332211 1 11111 221110
Q ss_pred ecCCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC--CCCCc--eeEEEeCC--CCCC
Q 024436 85 SGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT--SKAGT--IEIVAQLP--GFPD 158 (268)
Q Consensus 85 ~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~--~~~g~--~~~~~~l~--g~Pd 158 (268)
.....+.|+++|+++++.+.+......|++++++|||+.||++++..++|++|+++. ..... ...+...+ ..|+
T Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~ 236 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPD 236 (333)
T ss_dssp TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEE
T ss_pred ccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCC
Confidence 001257899999987777777666778999999999999999998889999999852 21111 11222333 3799
Q ss_pred ceEEcCCCCEEEEEecCCCcceeeeEeeCccceeeeeccc
Q 024436 159 NIKRSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPI 198 (268)
Q Consensus 159 gia~d~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~ 198 (268)
++++|++|++|++....+. |.++.+.++.+..+..
T Consensus 237 ~i~~d~~G~l~v~~~~~~~-----v~~~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 237 SCCIDSDDNLYVAMYGQGR-----VLVFNKRGYPIGQILI 271 (333)
T ss_dssp EEEEBTTCCEEEEEETTTE-----EEEECTTSCEEEEEEC
T ss_pred ceEECCCCCEEEEEcCCCE-----EEEECCCCCEEEEEEc
Confidence 9999999999999987653 5556556666555543
No 22
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.63 E-value=7.4e-14 Score=117.87 Aligned_cols=225 Identities=15% Similarity=0.195 Sum_probs=131.7
Q ss_pred ecCCCC---CcceEEECCCCCEEE-EEeCCCeEEEEeCCCCeEEEEEEcCCCCCe-------eEEEeecCCcceEEEEeC
Q 024436 29 QIEGAI---GPESLAFDALGEGPY-TGVSDGRIIKWHQDQRRWLHFARTSPNRNH-------ISVILSGDKTGRLMKYDP 97 (268)
Q Consensus 29 ~~~~~~---~P~gia~~~dG~~l~-~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~g~v~~~d~ 97 (268)
+..++. .|++++++++|++|+ ++..+++|.++++++.....+.......+. ...++... .++|+++|+
T Consensus 16 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~ 94 (270)
T 1rwi_B 16 PFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAA 94 (270)
T ss_dssp CCCSCSSCCCEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECT
T ss_pred ccccccccCCccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeC
Confidence 334455 999999999999776 546789999998876432221111000000 01122323 678999999
Q ss_pred CCCeEEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC-CCCCCceEEcCCCCEEEEEecC
Q 024436 98 ATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-PGFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 98 ~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l-~g~Pdgia~d~dG~l~va~~~~ 175 (268)
+++...... .++..|++|+++++|+ |||++...++|++|+..... ....... ...|.+|++|++|++|++....
T Consensus 95 ~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 170 (270)
T 1rwi_B 95 GSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKT---QTVLPFTGLNDPDGVAVDNSGNVYVTDTDN 170 (270)
T ss_dssp TCSCCEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCS---CEECCCCSCCSCCCEEECTTCCEEEEEGGG
T ss_pred CCceEeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCce---eEeeccccCCCceeEEEeCCCCEEEEECCC
Confidence 865554433 4557899999999996 99999988999999643211 1111111 1369999999999999999876
Q ss_pred CCcceeeeEeeCccceeeeeccc-cceeeeee-ccc-------cCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEE
Q 024436 176 RKGISKLVLSFPWIGNVLIKLPI-DIVKIHSS-LVK-------LSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEE 246 (268)
Q Consensus 176 ~~~~~~~v~~~~~~g~~l~~i~~-~~~~~~~~-~~~-------~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~ 246 (268)
+. |.++...+........ ....+..+ +.+ .... +.+.+++++++....... .+ +..+..+..
T Consensus 171 ~~-----i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~-~~v~~~~~~~~~~~~~~~-~~--~~~p~~i~~ 241 (270)
T 1rwi_B 171 NR-----VVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT-NQVVKLLAGSTTSTVLPF-TG--LNTPLAVAV 241 (270)
T ss_dssp TE-----EEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTT-SCEEEECTTCSCCEECCC-CS--CSCEEEEEE
T ss_pred CE-----EEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCC-CcEEEEcCCCCcceeecc-CC--CCCceeEEE
Confidence 53 6666655543322211 11111111 110 0001 224445554433222211 11 234556655
Q ss_pred -eCCEEEEeeCCCCeEEEEeCC
Q 024436 247 -KDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 247 -~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
.+|+||+++..+++|.++++.
T Consensus 242 ~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 242 DSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECCC
T ss_pred CCCCCEEEEECCCCEEEEEcCC
Confidence 468899999999999999875
No 23
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.62 E-value=8.7e-14 Score=135.96 Aligned_cols=192 Identities=11% Similarity=0.074 Sum_probs=127.2
Q ss_pred CCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCe----EEEEEEc---CCCC---Ce--eEEEeecCCcceEEEEeCC
Q 024436 32 GAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRR----WLHFART---SPNR---NH--ISVILSGDKTGRLMKYDPA 98 (268)
Q Consensus 32 ~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~----~~~~~~~---~~~~---~~--~~~~~~~~~~g~v~~~d~~ 98 (268)
.+..|.+|++++ ++.+|+++...++|++++.+|.. ...+... .|.+ .+ -..++.+...++|++++++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 467899999998 56777788888999999988731 1122111 1111 00 1234456677899999998
Q ss_pred CCeEEEee-cCCCCcceEEEccCCCEEEEEecCC-cEEEEEEccCCCCCceeEEEe-CCCCCCceEEcC-CCCEEEEEec
Q 024436 99 TKQVTVLL-GNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSP-RGGFWVGIHS 174 (268)
Q Consensus 99 ~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~-~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~-dG~l~va~~~ 174 (268)
+...+.+. ..+..|+||+++|.+++||++|+.. ++|++++++|.. +.++.. .-..|.||++|+ +|+||+++..
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~---~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc---eEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 55555554 5788899999999877999999876 899999998732 344433 124799999995 5689999876
Q ss_pred CCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEEe
Q 024436 175 RRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIG 254 (268)
Q Consensus 175 ~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~ 254 (268)
.+. | .+++.+|....++.... ..++.+.+++..+++||++
T Consensus 579 ~~~-----I----------------------------------~~~d~dG~~~~~v~~~~-~~l~~P~glav~~~~lYwt 618 (791)
T 3m0c_C 579 LHS-----I----------------------------------SSIDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFWT 618 (791)
T ss_dssp TTE-----E----------------------------------EEEETTSCSCEEEEECT-TTTSSEEEEEEETTEEEEE
T ss_pred CCc-----E----------------------------------EEEecCCCceEEEecCC-CccCCCCEEEEeCCEEEEE
Confidence 542 3 33333333333222211 2245566666678888998
Q ss_pred eCCCCeEEEEeC
Q 024436 255 SVNMPYAGLYNY 266 (268)
Q Consensus 255 s~~~~~v~~~~~ 266 (268)
++..++|.+++.
T Consensus 619 D~~~~~I~~~dk 630 (791)
T 3m0c_C 619 DIINEAIFSANR 630 (791)
T ss_dssp ETTTTEEEEEET
T ss_pred ECCCCEEEEEeC
Confidence 888888888864
No 24
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.62 E-value=1.7e-14 Score=126.98 Aligned_cols=159 Identities=14% Similarity=0.098 Sum_probs=111.8
Q ss_pred CCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCC--------eeEEEeecC-CcceEEEEeCCCCe
Q 024436 32 GAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRN--------HISVILSGD-KTGRLMKYDPATKQ 101 (268)
Q Consensus 32 ~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~-~~g~v~~~d~~~~~ 101 (268)
++..|+|+|+++ +|++|+++...++|.+++++|.....+....-..+ -...+.++. ..++|+++++++..
T Consensus 77 ~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 156 (318)
T 3sov_A 77 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS 156 (318)
T ss_dssp CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC
Confidence 456899999997 67777777788999999999864333321111110 001122332 36899999998433
Q ss_pred EEEe-ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe-CCCCCCceEEcCCCCEEEEEecCCCcc
Q 024436 102 VTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSRRKGI 179 (268)
Q Consensus 102 ~~~~-~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~dG~l~va~~~~~~~~ 179 (268)
.+.+ ..++..||||+++++++.||++|+..++|++++++|. .++++.. ..+.|+||++|. +.+|++++..+.
T Consensus 157 ~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~-- 230 (318)
T 3sov_A 157 RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT---NRQAVVKGSLPHPFALTLFE-DILYWTDWSTHS-- 230 (318)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSCCSCEEEEEEET-TEEEEEETTTTE--
T ss_pred eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC---ceEEEecCCCCCceEEEEeC-CEEEEEecCCCe--
Confidence 3444 3678899999999988899999999999999999873 3455544 235799999984 578999998874
Q ss_pred eeeeEeeCc-cceeeeecccc
Q 024436 180 SKLVLSFPW-IGNVLIKLPID 199 (268)
Q Consensus 180 ~~~v~~~~~-~g~~l~~i~~~ 199 (268)
|.++.+ +|+....+..+
T Consensus 231 ---V~~~~~~~G~~~~~i~~~ 248 (318)
T 3sov_A 231 ---ILACNKYTGEGLREIHSD 248 (318)
T ss_dssp ---EEEEETTTCCSCEEEECC
T ss_pred ---EEEEECCCCCceEEEeCC
Confidence 655554 67766666554
No 25
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=3.1e-14 Score=122.76 Aligned_cols=140 Identities=17% Similarity=0.221 Sum_probs=97.6
Q ss_pred CCcceEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEE-EEcC--------------CCCC-eeEEEee-----------
Q 024436 34 IGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHF-ARTS--------------PNRN-HISVILS----------- 85 (268)
Q Consensus 34 ~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~~~~~-~~~~--------------~~~~-~~~~~~~----------- 85 (268)
..|.+++++++ |++++++. .+.|.+++++|+ +..+ .... +++. |+.....
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~g~-~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADM-RLGLLVVQTDGT-FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp CCEEEEEECSSSSEEEEEET-TTEEEEEETTSC-EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCCceEEEecCCCcEEEEEC-CCCEEEEeCCCC-EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccc
Confidence 47999999999 88665544 458999998855 3333 2110 1111 2211100
Q ss_pred cCCcceEEEEeCCCCeEEEeecCCCCcceEEEc----cCCCEEEEEecCCcEEEEEEcc-CCCCCceeEEEeCC----CC
Q 024436 86 GDKTGRLMKYDPATKQVTVLLGNLSFPNGVALS----EDGNYILLAETTSCRILRYWLK-TSKAGTIEIVAQLP----GF 156 (268)
Q Consensus 86 ~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~s----pdg~~lyva~~~~~~I~~~~~~-~~~~g~~~~~~~l~----g~ 156 (268)
....+.|++++++ ++.+.+......|++++++ |||+.||++++..++|++|+++ .+.......+..++ +.
T Consensus 149 ~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~ 227 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG 227 (314)
T ss_dssp SSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCE
T ss_pred cCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCC
Confidence 0013789999998 7777777777889999999 9998899999999999999986 22222233444443 56
Q ss_pred CCceEEcCCCCEEEEEecCC
Q 024436 157 PDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 157 Pdgia~d~dG~l~va~~~~~ 176 (268)
|+++++|++|++|++....+
T Consensus 228 p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 228 ADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp EEEEEEBTTCCEEEEEETTT
T ss_pred CCceEECCCCCEEEEEcCCC
Confidence 99999999999999997665
No 26
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.61 E-value=2.6e-14 Score=127.21 Aligned_cols=162 Identities=17% Similarity=0.108 Sum_probs=113.5
Q ss_pred EEecCCCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC----------CCCCeeEEEeecCCc-ceEEE
Q 024436 27 QYQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTS----------PNRNHISVILSGDKT-GRLMK 94 (268)
Q Consensus 27 ~i~~~~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~-g~v~~ 94 (268)
.+...++..|+|+|+++ +|++|+++...++|.+++.+|+....+.... +...++ ++++... ++|++
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~l--y~td~~~~~~I~r 186 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTI--YWTDWGNTPRIEA 186 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEE--EEEECSSSCEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeE--EEeccCCCCEEEE
Confidence 33334467899999997 5677777778899999999986433322111 111122 2333444 89999
Q ss_pred EeCCCCeEEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe-CCCCCCceEEcCCCCEEEEE
Q 024436 95 YDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGI 172 (268)
Q Consensus 95 ~d~~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~dG~l~va~ 172 (268)
++.++...+.+. .++..||||+++|+++.||++|+..++|++++++|. .++.+.. -.+.|+||+++ +|++|+++
T Consensus 187 ~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~---~~~~~~~~~~~~P~giav~-~~~ly~td 262 (349)
T 3v64_C 187 SSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---HRKAVISQGLPHPFAITVF-EDSLYWTD 262 (349)
T ss_dssp EETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEE-TTEEEEEE
T ss_pred EeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC---ceEEEEeCCCCCceEEEEE-CCEEEEec
Confidence 998844444443 578899999999988899999999999999999873 2344443 22579999995 67999999
Q ss_pred ecCCCcceeeeEeeC-ccceeeeecccc
Q 024436 173 HSRRKGISKLVLSFP-WIGNVLIKLPID 199 (268)
Q Consensus 173 ~~~~~~~~~~v~~~~-~~g~~l~~i~~~ 199 (268)
+..+. |.++. .+|+....+..+
T Consensus 263 ~~~~~-----V~~~~~~~G~~~~~i~~~ 285 (349)
T 3v64_C 263 WHTKS-----INSANKFTGKNQEIIRNK 285 (349)
T ss_dssp TTTTE-----EEEEETTTCCSCEEEECS
T ss_pred CCCCe-----EEEEEccCCCccEEeccC
Confidence 99874 55554 577766555443
No 27
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.61 E-value=2.4e-13 Score=119.39 Aligned_cols=164 Identities=18% Similarity=0.199 Sum_probs=113.2
Q ss_pred EEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc--------------CCCCC-eeEEEee--cC
Q 024436 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART--------------SPNRN-HISVILS--GD 87 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~--------------~~~~~-~~~~~~~--~~ 87 (268)
+..+..+. .|.+++++++|+++++. .+.|+++++++..+..+... .+++. |+..... ..
T Consensus 83 ~~~~~~~~--~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~ 158 (326)
T 2ghs_A 83 KTVHALPF--MGSALAKISDSKQLIAS--DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAET 158 (326)
T ss_dssp EEEEECSS--CEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCT
T ss_pred EEEEECCC--cceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCC
Confidence 34444443 68999999999976654 44599998754433333221 11111 2221110 11
Q ss_pred CcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEcc--CC-CCCceeEEEeC---CCCCCceE
Q 024436 88 KTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK--TS-KAGTIEIVAQL---PGFPDNIK 161 (268)
Q Consensus 88 ~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~--~~-~~g~~~~~~~l---~g~Pdgia 161 (268)
..+.||+++ + ++++.+......||+++++|||+.||++++..++|++|+++ ++ .+...+.+..+ .+.|+|++
T Consensus 159 ~~~~l~~~~-~-g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~ 236 (326)
T 2ghs_A 159 GAGSIYHVA-K-GKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSV 236 (326)
T ss_dssp TCEEEEEEE-T-TEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEE
T ss_pred CceEEEEEe-C-CcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeE
Confidence 357899999 4 78877766777899999999999999999999999999986 44 44444555543 35799999
Q ss_pred EcCCCCEEEEEecCCCcceeeeEeeCccceeeeecccc
Q 024436 162 RSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPID 199 (268)
Q Consensus 162 ~d~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~ 199 (268)
+|++|++|++.+..+. |.++.+.++.+..+..+
T Consensus 237 ~d~~G~lwva~~~~~~-----v~~~d~~g~~~~~i~~~ 269 (326)
T 2ghs_A 237 CDAEGHIWNARWGEGA-----VDRYDTDGNHIARYEVP 269 (326)
T ss_dssp ECTTSCEEEEEETTTE-----EEEECTTCCEEEEEECS
T ss_pred ECCCCCEEEEEeCCCE-----EEEECCCCCEEEEEECC
Confidence 9999999999987653 66666677776666554
No 28
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.61 E-value=1.3e-12 Score=111.17 Aligned_cols=227 Identities=13% Similarity=0.132 Sum_probs=143.9
Q ss_pred CEEEEecCC-CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCC-CCe-------eEEEeecCCcceEEE
Q 024436 24 GVVQYQIEG-AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPN-RNH-------ISVILSGDKTGRLMK 94 (268)
Q Consensus 24 ~~~~i~~~~-~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~-~~~-------~~~~~~~~~~g~v~~ 94 (268)
.+..++++. ...|++++++++|+++++...++.|.+++++++ +..+...... .+. ...++.....+.|++
T Consensus 4 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 4 KLQELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLDGK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGR 82 (299)
T ss_dssp EEEEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred eEEEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCCCC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEE
Confidence 466777764 468999999999997777666899999998854 3433311111 100 011223344678999
Q ss_pred EeCCCCeEEEee--cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CCCCCCceEEcCCCCEEE
Q 024436 95 YDPATKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGFWV 170 (268)
Q Consensus 95 ~d~~~~~~~~~~--~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~g~Pdgia~d~dG~l~v 170 (268)
+|++ ++.+... .....|++|+++++|+ ||+++...+.|++++.++ ....+.. ....|.++++|++|++|+
T Consensus 83 ~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v 156 (299)
T 2z2n_A 83 ITKK-GIIKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITDDG----KIREYELPNKGSYPSFITLGSDNALWF 156 (299)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSCEEE
T ss_pred ECCC-CcEEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECCCC----CEEEecCCCCCCCCceEEEcCCCCEEE
Confidence 9987 6665543 2456899999999995 999998889999998843 2333321 124699999999999999
Q ss_pred EEecCCCcceeeeEeeCccceeeee-ccccceeeeee-ccc-------cCCCcEEEEEECCCCCEEEEEEcCCCCceece
Q 024436 171 GIHSRRKGISKLVLSFPWIGNVLIK-LPIDIVKIHSS-LVK-------LSGNGGMAMRISEQGNVLEILEEIGRKMWRSI 241 (268)
Q Consensus 171 a~~~~~~~~~~~v~~~~~~g~~l~~-i~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~ 241 (268)
+....+. |.++..++++... ++.....+..+ +.+ .... +.+.+++++|+... +..+. ....+
T Consensus 157 ~~~~~~~-----i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~g~~~~-~~~~~--~~~~~ 227 (299)
T 2z2n_A 157 TENQNNA-----IGRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIG-NKIGRITTSGEITE-FKIPT--PNARP 227 (299)
T ss_dssp EETTTTE-----EEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTT-TEEEEECTTCCEEE-EECSS--TTCCE
T ss_pred EeCCCCE-----EEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCC-ceEEEECCCCcEEE-EECCC--CCCCc
Confidence 9876553 5566556665432 22211112111 110 0111 34566777666443 33221 12345
Q ss_pred EEEEE-eCCEEEEeeCCCCeEEEEeC
Q 024436 242 SEVEE-KDGNLWIGSVNMPYAGLYNY 266 (268)
Q Consensus 242 s~~~~-~~g~Lyv~s~~~~~v~~~~~ 266 (268)
..+.. .+|+||+++..++.|.+++.
T Consensus 228 ~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 228 HAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEEET
T ss_pred eeEEECCCCCEEEeccCCceEEEECC
Confidence 55554 46899999999999999985
No 29
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.60 E-value=2.2e-14 Score=129.45 Aligned_cols=164 Identities=17% Similarity=0.104 Sum_probs=114.8
Q ss_pred EEEEecCCCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC----------CCCCeeEEEeecCCc-ceE
Q 024436 25 VVQYQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTS----------PNRNHISVILSGDKT-GRL 92 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~-g~v 92 (268)
++.+...++..|+|+|+++ +|++|+++...++|.+++++|.....+.... +...++ ++++... ++|
T Consensus 150 ~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~l--y~td~~~~~~I 227 (386)
T 3v65_B 150 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTI--YWTDWGNTPRI 227 (386)
T ss_dssp EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEE--EEEECSSSCEE
T ss_pred cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeE--EEeccCCCCEE
Confidence 3444444567899999997 5666777778899999999886433332111 111222 2333444 899
Q ss_pred EEEeCCCCeEEEe-ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe-CCCCCCceEEcCCCCEEE
Q 024436 93 MKYDPATKQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWV 170 (268)
Q Consensus 93 ~~~d~~~~~~~~~-~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~dG~l~v 170 (268)
+++++++...+.+ ..++..||||+++|+++.||++|+..++|++++++|. .+..+.. -.+.|+||+++ ++++|+
T Consensus 228 ~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~P~giav~-~~~ly~ 303 (386)
T 3v65_B 228 EASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---HRKAVISQGLPHPFAITVF-EDSLYW 303 (386)
T ss_dssp EEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC---SCEEEECSSCSSEEEEEEE-TTEEEE
T ss_pred EEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC---eeEEEEECCCCCceEEEEE-CCEEEE
Confidence 9999984444444 3678899999999988899999999999999999873 2344433 22479999995 578999
Q ss_pred EEecCCCcceeeeEeeC-ccceeeeecccc
Q 024436 171 GIHSRRKGISKLVLSFP-WIGNVLIKLPID 199 (268)
Q Consensus 171 a~~~~~~~~~~~v~~~~-~~g~~l~~i~~~ 199 (268)
+++..+. |.++. .+|+.+..+..+
T Consensus 304 td~~~~~-----V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 304 TDWHTKS-----INSANKFTGKNQEIIRNK 328 (386)
T ss_dssp EETTTTE-----EEEEETTTCCSCEEEECS
T ss_pred eeCCCCe-----EEEEECCCCcceEEEccC
Confidence 9998874 66654 677766666544
No 30
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.60 E-value=2e-12 Score=110.08 Aligned_cols=227 Identities=15% Similarity=0.131 Sum_probs=144.8
Q ss_pred CEEEEecCC-CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCC-CCCe-------eEEEeecCCcceEEE
Q 024436 24 GVVQYQIEG-AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSP-NRNH-------ISVILSGDKTGRLMK 94 (268)
Q Consensus 24 ~~~~i~~~~-~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~-~~~~-------~~~~~~~~~~g~v~~ 94 (268)
.+..++++. ...|++++++++|+++++...+++|.+++++++ +..+..... ..+. ...++.....++|++
T Consensus 9 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~ 87 (300)
T 2qc5_A 9 YLEEFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQSGR-IKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGK 87 (300)
T ss_dssp EEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred eEEEEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCCCc-eEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEE
Confidence 467777764 568999999999998887777899999998855 333321111 1100 011223345678999
Q ss_pred EeCCCCeEEEee--cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CCCCCCceEEcCCCCEEE
Q 024436 95 YDPATKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGFWV 170 (268)
Q Consensus 95 ~d~~~~~~~~~~--~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~g~Pdgia~d~dG~l~v 170 (268)
+|++ ++.+... .....|++|+++++|+ ||+++...++|++++.++ ....+.. ....|.++++|++|++|+
T Consensus 88 ~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v 161 (300)
T 2qc5_A 88 LSKK-GGFTEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTADG----TIYEYDLPNKGSYPAFITLGSDNALWF 161 (300)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTTS----CEEEEECSSTTCCEEEEEECTTSSEEE
T ss_pred ECCC-CCeEEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCCC----CEEEccCCCCCCCceeEEECCCCCEEE
Confidence 9998 7665443 2347799999999996 999998889999998863 2232221 124699999999999999
Q ss_pred EEecCCCcceeeeEeeCccceeeee-ccccceeeeee-cc-------ccCCCcEEEEEECCCCCEEEEEEcCCCCceece
Q 024436 171 GIHSRRKGISKLVLSFPWIGNVLIK-LPIDIVKIHSS-LV-------KLSGNGGMAMRISEQGNVLEILEEIGRKMWRSI 241 (268)
Q Consensus 171 a~~~~~~~~~~~v~~~~~~g~~l~~-i~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~ 241 (268)
+....+. |.++..++++... .+.....+..+ +. ..... +.+.+++++|+..... .+.+ ...+
T Consensus 162 ~~~~~~~-----i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~-~~i~~~~~~g~~~~~~-~~~~--~~~~ 232 (300)
T 2qc5_A 162 TENQNNS-----IGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMG-NKIGRITTTGEISEYD-IPTP--NARP 232 (300)
T ss_dssp EETTTTE-----EEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTT-TEEEEECTTCCEEEEE-CSST--TCCE
T ss_pred EecCCCe-----EEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCC-CEEEEEcCCCcEEEEE-CCCC--CCCc
Confidence 9986653 6666666665431 11111111111 11 00111 3466677766655432 2211 2345
Q ss_pred EEEEE-eCCEEEEeeCCCCeEEEEeC
Q 024436 242 SEVEE-KDGNLWIGSVNMPYAGLYNY 266 (268)
Q Consensus 242 s~~~~-~~g~Lyv~s~~~~~v~~~~~ 266 (268)
..+.. .+|+||+++..++.|.+++.
T Consensus 233 ~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 233 HAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEECT
T ss_pred eEEEECCCCCEEEeccCCCeEEEECC
Confidence 55554 46889999999999999975
No 31
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.59 E-value=1.4e-13 Score=120.74 Aligned_cols=155 Identities=13% Similarity=0.102 Sum_probs=110.4
Q ss_pred CCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC----------CCCCeeEEEeecCC-cceEEEEeCCC
Q 024436 32 GAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTS----------PNRNHISVILSGDK-TGRLMKYDPAT 99 (268)
Q Consensus 32 ~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~-~g~v~~~d~~~ 99 (268)
++..|+|+|+++ ++++|+++..+++|.+++++|+....+.... +...++ ++.+.. .++|+++++++
T Consensus 75 ~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~l--y~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 75 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFM--YWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEE--EEEECSSSCEEEEEETTS
T ss_pred CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEE--EEEccCCCCeEEEEcCCC
Confidence 456899999997 5677777778899999999987544333211 111222 223333 37999999884
Q ss_pred CeEEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC---CCCCCceEEcCCCCEEEEEecC
Q 024436 100 KQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL---PGFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 100 ~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l---~g~Pdgia~d~dG~l~va~~~~ 175 (268)
...+.+. ..+..||||+++++++.||++|+..++|++++++|. ..+++... ...|+||++|. |++|++++..
T Consensus 153 ~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~---~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~ 228 (316)
T 1ijq_A 153 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN 228 (316)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEEECTTTTSSEEEEEEET-TEEEEEETTT
T ss_pred CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC---ceEEEeecCCccCCcEEEEEEC-CEEEEEECCC
Confidence 3344443 568899999999998899999999999999999873 34555442 24799999984 7999999988
Q ss_pred CCcceeeeEeeCc-cceeeeecc
Q 024436 176 RKGISKLVLSFPW-IGNVLIKLP 197 (268)
Q Consensus 176 ~~~~~~~v~~~~~-~g~~l~~i~ 197 (268)
+. |.++.+ +|+.+..+.
T Consensus 229 ~~-----V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 229 EA-----IFSANRLTGSDVNLLA 246 (316)
T ss_dssp TE-----EEEEETTTCCCCEEEE
T ss_pred Ce-----EEEEeCCCCcceEEEe
Confidence 74 666643 676555543
No 32
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.58 E-value=2e-13 Score=130.29 Aligned_cols=146 Identities=15% Similarity=0.139 Sum_probs=103.9
Q ss_pred EecCCCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCC------e--eEEEeecCCcceEEEEeCC
Q 024436 28 YQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRN------H--ISVILSGDKTGRLMKYDPA 98 (268)
Q Consensus 28 i~~~~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~------~--~~~~~~~~~~g~v~~~d~~ 98 (268)
++++++..|.++++++ +|.+|+++...++|.|++++|...+.+....-..+ | ...+.++...++|.+++.+
T Consensus 343 ~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~ 422 (619)
T 3s94_A 343 LQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN 422 (619)
T ss_dssp CCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence 3455677899999998 57777788889999999999864444332211111 0 1123455667888888887
Q ss_pred CCeEEEee-cCCCCcceEEEccCCCEEEEEecCC-cEEEEEEccCCCCCceeEEEe-CCCCCCceEEcC-CCCEEEEEec
Q 024436 99 TKQVTVLL-GNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSP-RGGFWVGIHS 174 (268)
Q Consensus 99 ~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~-~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~-dG~l~va~~~ 174 (268)
+...+.+. .++..|++|+++|....||++|... .+|.+++++|.. ...+.. .-..|.||++|+ +++||+++..
T Consensus 423 G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~---~~~l~~~~l~~P~GlalD~~~~~LY~aD~~ 499 (619)
T 3s94_A 423 GTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD---RVVLVNTSLGWPNGLALDYDEGKIYWGDAK 499 (619)
T ss_dssp SCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCc---cEEEEeCCCCCCeeeEEcccCCEEEEEECC
Confidence 44444444 5789999999999866899999875 799999999742 334433 124799999997 5689999877
Q ss_pred CC
Q 024436 175 RR 176 (268)
Q Consensus 175 ~~ 176 (268)
.+
T Consensus 500 ~~ 501 (619)
T 3s94_A 500 TD 501 (619)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 33
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.57 E-value=4.2e-12 Score=108.05 Aligned_cols=228 Identities=12% Similarity=0.104 Sum_probs=140.3
Q ss_pred CCEEEEecC-CCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCC-CCe-------eEEEeecCCcceEE
Q 024436 23 QGVVQYQIE-GAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPN-RNH-------ISVILSGDKTGRLM 93 (268)
Q Consensus 23 ~~~~~i~~~-~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~-~~~-------~~~~~~~~~~g~v~ 93 (268)
..+..+..+ ....|.+++++++|+++++...+++|.+++++++ +..+...... .++ ...++.....+.|+
T Consensus 45 ~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 123 (299)
T 2z2n_A 45 GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIG 123 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEE
Confidence 445555544 3467999999999998887777899999998866 3333311111 100 01122333467899
Q ss_pred EEeCCCCeEEEee--cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CCCCCCceEEcCCCCEE
Q 024436 94 KYDPATKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGFW 169 (268)
Q Consensus 94 ~~d~~~~~~~~~~--~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~g~Pdgia~d~dG~l~ 169 (268)
++|++ ++..... .....|++|+++++|+ +|+++...+.|++|+.++ ....+.. ....|.+|++|++|++|
T Consensus 124 ~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~ 197 (299)
T 2z2n_A 124 RITDD-GKIREYELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITESG----DITEFKIPTPASGPVGITKGNDDALW 197 (299)
T ss_dssp EECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEE
T ss_pred EECCC-CCEEEecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcCCC----cEEEeeCCCCCCcceeEEECCCCCEE
Confidence 99984 6665443 3457899999999995 999998889999999842 2333311 12368999999999999
Q ss_pred EEEecCCCcceeeeEeeCccceeeee-ccccceeeeeec-c-------ccCCCcEEEEEECCCCCEEEEEEcCCCCceec
Q 024436 170 VGIHSRRKGISKLVLSFPWIGNVLIK-LPIDIVKIHSSL-V-------KLSGNGGMAMRISEQGNVLEILEEIGRKMWRS 240 (268)
Q Consensus 170 va~~~~~~~~~~~v~~~~~~g~~l~~-i~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~ 240 (268)
++....+. |.++.+++++... ++.+...+..+. . ..... +.+.+++++|+. ..+..+.+ ...
T Consensus 198 v~~~~~~~-----i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~d~~g~~-~~~~~~~~--~~~ 268 (299)
T 2z2n_A 198 FVEIIGNK-----IGRITTSGEITEFKIPTPNARPHAITAGAGIDLWFTEWGA-NKIGRLTSNNII-EEYPIQIK--SAE 268 (299)
T ss_dssp EEETTTTE-----EEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-TEEEEEETTTEE-EEEECSSS--SCC
T ss_pred EEccCCce-----EEEECCCCcEEEEECCCCCCCceeEEECCCCCEEEeccCC-ceEEEECCCCce-EEEeCCCC--CCc
Confidence 99976653 6666666664331 221112222211 1 00011 235566666643 33332222 123
Q ss_pred eEEEEEeCCEEEEeeCCCCeEEEEeCC
Q 024436 241 ISEVEEKDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 241 ~s~~~~~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
+..++..+|+||+++. .+.+.+++.+
T Consensus 269 ~~~i~~~~g~l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 269 PHGICFDGETIWFAME-CDKIGKLTLI 294 (299)
T ss_dssp EEEEEECSSCEEEEET-TTEEEEEEEC
T ss_pred cceEEecCCCEEEEec-CCcEEEEEcC
Confidence 4444447899999986 6899998754
No 34
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.57 E-value=4.5e-12 Score=107.93 Aligned_cols=226 Identities=15% Similarity=0.167 Sum_probs=142.5
Q ss_pred CEEEEecCC-CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCC-CCCe-------eEEEeecCCcceEEE
Q 024436 24 GVVQYQIEG-AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSP-NRNH-------ISVILSGDKTGRLMK 94 (268)
Q Consensus 24 ~~~~i~~~~-~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~-~~~~-------~~~~~~~~~~g~v~~ 94 (268)
.+..+.++. ...|.+++++++|+++++...+++|.+++++|+. ..+..... ..++ ...++.....+.|++
T Consensus 51 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 129 (300)
T 2qc5_A 51 RIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGK 129 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred ceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEE
Confidence 445555553 4689999999999988777778999999988663 33322111 1110 011223344678999
Q ss_pred EeCCCCeEEEe--ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CCCCCCceEEcCCCCEEE
Q 024436 95 YDPATKQVTVL--LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGFWV 170 (268)
Q Consensus 95 ~d~~~~~~~~~--~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~g~Pdgia~d~dG~l~v 170 (268)
+|++ ++.... ......|++|+++++|+ ||+++...++|++|+.++ ....+.. ....|.+|++|++|++|+
T Consensus 130 ~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v 203 (300)
T 2qc5_A 130 LTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITNTG----KLEEYPLPTNAAAPVGITSGNDGALWF 203 (300)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEE
T ss_pred ECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECCCC----cEEEeeCCCCCCCcceEEECCCCCEEE
Confidence 9998 766544 23467899999999997 999999889999999853 2233321 113699999999999999
Q ss_pred EEecCCCcceeeeEeeCccceeeee-ccccceeeeeec-c-------ccCCCcEEEEEECCCCCEEEEEEcCCCCceece
Q 024436 171 GIHSRRKGISKLVLSFPWIGNVLIK-LPIDIVKIHSSL-V-------KLSGNGGMAMRISEQGNVLEILEEIGRKMWRSI 241 (268)
Q Consensus 171 a~~~~~~~~~~~v~~~~~~g~~l~~-i~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~ 241 (268)
+....+. |.++...+++... ++.....+..+. . ..... +.+.+++++|+... +.-+.+ ...+
T Consensus 204 ~~~~~~~-----i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~-~~i~~~~~~g~~~~-~~~~~~--~~~~ 274 (300)
T 2qc5_A 204 VEIMGNK-----IGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGA-NQIGRITNDNTIQE-YQLQTE--NAEP 274 (300)
T ss_dssp EETTTTE-----EEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-TEEEEECTTSCEEE-EECCST--TCCC
T ss_pred EccCCCE-----EEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCC-CeEEEECCCCcEEE-EECCcc--CCcc
Confidence 9987653 6666666665432 222222222111 1 00111 34667777766543 322221 1223
Q ss_pred EEEEE-eCCEEEEeeCCCCeEEEEeCC
Q 024436 242 SEVEE-KDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 242 s~~~~-~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
..++. .+|+||+++. + .|.+++.+
T Consensus 275 ~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 275 HGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred ceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 44444 5789999998 6 99998764
No 35
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.56 E-value=3.1e-12 Score=110.90 Aligned_cols=232 Identities=11% Similarity=0.057 Sum_probs=135.8
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEe-CCCeEEEEeCCCCe--EEEEEE---------cCCCCCeeEEEeecCCcc-
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRR--WLHFAR---------TSPNRNHISVILSGDKTG- 90 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~-~~g~I~~~~~~g~~--~~~~~~---------~~~~~~~~~~~~~~~~~g- 90 (268)
.+..+..+ ...| +++++|||+.+|+.. .+++|+.++.+... ...+.. .++++.++. . .....+
T Consensus 32 ~~~~~~~~-~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~-~~~~~~~ 107 (331)
T 3u4y_A 32 ILNQITLG-YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-T-VTGLNHP 107 (331)
T ss_dssp EEEEEECC-CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-E-CCCSSSS
T ss_pred eeeeEEcc-CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-E-ecCCCCc
Confidence 44555555 4456 999999999666554 58999999985443 222211 123344444 2 212223
Q ss_pred -eEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcE-EEEEEccCC-CCCcee-EEEeCCCCCCceEEcCCC
Q 024436 91 -RLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCR-ILRYWLKTS-KAGTIE-IVAQLPGFPDNIKRSPRG 166 (268)
Q Consensus 91 -~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~-I~~~~~~~~-~~g~~~-~~~~l~g~Pdgia~d~dG 166 (268)
.|+.+|.++++..........|++++|+|||++||+++...+. |++|+++.. ...... ........|.++++++||
T Consensus 108 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg 187 (331)
T 3u4y_A 108 FNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDG 187 (331)
T ss_dssp CEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTS
T ss_pred ccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCC
Confidence 8999999888876666666779999999999999999988777 999998742 111111 111123469999999999
Q ss_pred C-EEEEEecCCCcceeeeEee-Ccccee---eeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCc----
Q 024436 167 G-FWVGIHSRRKGISKLVLSF-PWIGNV---LIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKM---- 237 (268)
Q Consensus 167 ~-l~va~~~~~~~~~~~v~~~-~~~g~~---l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~---- 237 (268)
+ +|++....+. |..+ ..+++. +..++.+.......+ +|....++..+.....+.+++-.+|+.
T Consensus 188 ~~l~v~~~~~~~-----v~v~d~~~~~~~~~~~~~~~~~~~~~~~~---spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 188 NFAFVANLIGNS-----IGILETQNPENITLLNAVGTNNLPGTIVV---SRDGSTVYVLTESTVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp SEEEEEETTTTE-----EEEEECSSTTSCEEEEEEECSSCCCCEEE---CTTSSEEEEECSSEEEEEEEETTTTEEEEEE
T ss_pred CEEEEEeCCCCe-----EEEEECCCCcccceeeeccCCCCCceEEE---CCCCCEEEEEEcCCCEEEEEECCCCceeeec
Confidence 7 8888876653 4434 345666 665554321111111 111011222222111122232222221
Q ss_pred ------------eeceEEEE--EeCCEEEEeeCCCCeEEEEeCC
Q 024436 238 ------------WRSISEVE--EKDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 238 ------------~~~~s~~~--~~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
......+. ..+.+||+++..++.|.+++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 260 SFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp EEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 01111122 2456799999999999999876
No 36
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.56 E-value=3.8e-13 Score=128.39 Aligned_cols=195 Identities=11% Similarity=0.032 Sum_probs=122.4
Q ss_pred EecCCCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeE-EEEEEcCCCCC------e--eEEEeecCCcceEEEEeC
Q 024436 28 YQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRW-LHFARTSPNRN------H--ISVILSGDKTGRLMKYDP 97 (268)
Q Consensus 28 i~~~~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~-~~~~~~~~~~~------~--~~~~~~~~~~g~v~~~d~ 97 (268)
+.++.+..|.++++++ ++.+|+++..+++|.|++++|... ..+...+-..+ + -..+.++...++|.+++.
T Consensus 34 ~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~ 113 (619)
T 3s94_A 34 IVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNL 113 (619)
T ss_dssp --CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEEC
Confidence 3444577899999998 566667788899999999988631 22211110111 0 112345567789999999
Q ss_pred CCCeEEEee-cCCCCcceEEEccCCCEEEEEecC-CcEEEEEEccCCCCCceeEEEe-CCCCCCceEEcCC-CCEEEEEe
Q 024436 98 ATKQVTVLL-GNLSFPNGVALSEDGNYILLAETT-SCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPR-GGFWVGIH 173 (268)
Q Consensus 98 ~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~-~~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~d-G~l~va~~ 173 (268)
++...+.+. ..+..|++|+++|.+..||+||.. ..+|++.+++|.. ...+.. --..|.||++|++ ++||+++.
T Consensus 114 dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~---~~~l~~~~~~~P~Glald~~~~~LY~aD~ 190 (619)
T 3s94_A 114 DGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYWADA 190 (619)
T ss_dssp TSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSSEEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc---eEEEEeCCCCCCcEEEEEccCCEEEEEeC
Confidence 854445554 688999999999987799999976 5799999999742 334432 1236999999985 67999987
Q ss_pred cCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEE
Q 024436 174 SRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWI 253 (268)
Q Consensus 174 ~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv 253 (268)
..+. |.++..+| .-...+.... +..+.+++...++||+
T Consensus 191 ~~~~-----I~~~~~dG----------------------------------~~~~~~~~~~---~~~P~gi~~~~~~ly~ 228 (619)
T 3s94_A 191 KLNF-----IHKSNLDG----------------------------------TNRQAVVKGS---LPHPFALTLFEDILYW 228 (619)
T ss_dssp TTCC-----EEEESSSC----------------------------------CEEC------------CCCEEESSSEEEE
T ss_pred CCCe-----EEEecCCC----------------------------------CccEEEEeCC---CCCceEEEEeCCEEEE
Confidence 6653 44444333 2222221100 1223344445668888
Q ss_pred eeCCCCeEEEEeCC
Q 024436 254 GSVNMPYAGLYNYS 267 (268)
Q Consensus 254 ~s~~~~~v~~~~~~ 267 (268)
+++.+++|.+++..
T Consensus 229 td~~~~~V~~~d~~ 242 (619)
T 3s94_A 229 TDWSTHSILACNKY 242 (619)
T ss_dssp ECTTTCSEEEEESS
T ss_pred ecCCCCEEEEEECC
Confidence 88888888888754
No 37
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.56 E-value=5.5e-13 Score=113.84 Aligned_cols=176 Identities=15% Similarity=0.240 Sum_probs=118.6
Q ss_pred CCCcceEEE-CCCCCEEEEEeC-CCeEEEEeCCCCeEEEEEEc----------CCCCCeeEEEeecCCcceEEEEeCCCC
Q 024436 33 AIGPESLAF-DALGEGPYTGVS-DGRIIKWHQDQRRWLHFART----------SPNRNHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 33 ~~~P~gia~-~~dG~~l~~~~~-~g~I~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
+..|.++++ +++|++++++.. +++|.+++++|+....+... .+++. .++.....++|+++|+++.
T Consensus 76 ~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~---l~v~~~~~~~i~~~~~~g~ 152 (286)
T 1q7f_A 76 LLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR---IIVVECKVMRVIIFDQNGN 152 (286)
T ss_dssp BSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSC---EEEEETTTTEEEEECTTSC
T ss_pred ccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCC---EEEEECCCCEEEEEcCCCC
Confidence 357999999 688987777654 89999999888754433211 11111 2233345678999998743
Q ss_pred eEEEee--cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC--CCCCCceEEcCCCCEEEEEecCC
Q 024436 101 QVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL--PGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 101 ~~~~~~--~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l--~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
.+..+. ..+..|++|+++|||+ +||+++.+++|++|+.++.. ...+... ...|.+|++|++|++|++....+
T Consensus 153 ~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~---~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~ 228 (286)
T 1q7f_A 153 VLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNHNN 228 (286)
T ss_dssp EEEEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred EEEEeCCCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCCCE---EEEEccCCccCCCcEEEECCCCCEEEEeCCCC
Confidence 344433 4567899999999995 99999999999999987521 2223211 14699999999999999998764
Q ss_pred CcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEE
Q 024436 177 KGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEI 229 (268)
Q Consensus 177 ~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 229 (268)
.+ |.++.+.++.+..+..... ... ...+.++++|+++..
T Consensus 229 ~~----i~~~~~~g~~~~~~~~~~~---------~~~-~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 229 FN----LTIFTQDGQLISALESKVK---------HAQ-CFDVALMDDGSVVLA 267 (286)
T ss_dssp CE----EEEECTTSCEEEEEEESSC---------CSC-EEEEEEETTTEEEEE
T ss_pred EE----EEEECCCCCEEEEEcccCC---------CCc-ceeEEECCCCcEEEE
Confidence 12 7778888887776654311 111 235666777765444
No 38
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.55 E-value=1.5e-11 Score=107.02 Aligned_cols=226 Identities=10% Similarity=0.076 Sum_probs=135.4
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeC-------CCeEEEEeCCCCeEE-EEEEc--------CCCCCeeEEEeecC
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVS-------DGRIIKWHQDQRRWL-HFART--------SPNRNHISVILSGD 87 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~-------~g~I~~~~~~g~~~~-~~~~~--------~~~~~~~~~~~~~~ 87 (268)
.+...+++. +|.+++++|||+.+|+... +++|..++.++.... .+... ++++.++ +....
T Consensus 33 ~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l--~v~~~ 108 (353)
T 3vgz_A 33 EMLRKAVGK--GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTL--WFGNT 108 (353)
T ss_dssp CEEEEEEES--SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEE--EEEET
T ss_pred hhhhhhhcc--CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEE--EEEec
Confidence 566667665 8999999999998887663 578999998644322 22211 1222322 23344
Q ss_pred CcceEEEEeCCCCeEEEeecC--CC--------CcceEEEccCCCEEEEEec-CCcEEEEEEccCCCCCceeEEEe-CCC
Q 024436 88 KTGRLMKYDPATKQVTVLLGN--LS--------FPNGVALSEDGNYILLAET-TSCRILRYWLKTSKAGTIEIVAQ-LPG 155 (268)
Q Consensus 88 ~~g~v~~~d~~~~~~~~~~~~--~~--------~pnGia~spdg~~lyva~~-~~~~I~~~~~~~~~~g~~~~~~~-l~g 155 (268)
..+.|+.+|+++++....... .. .|++++++|||+++|+++. ..++|++|++++++ ...... ...
T Consensus 109 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~ 185 (353)
T 3vgz_A 109 VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK---LKTAIQNTGK 185 (353)
T ss_dssp TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE---EEEEECCCCT
T ss_pred CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc---eEEEecCCCC
Confidence 567999999988876443321 11 2789999999999999984 56889999987432 211122 223
Q ss_pred CCCceEEcCCCC-EEEEEecCCCcceeeeEe-eCccceeeeeccccce----eeee-eccc--------cCCCcEEEEEE
Q 024436 156 FPDNIKRSPRGG-FWVGIHSRRKGISKLVLS-FPWIGNVLIKLPIDIV----KIHS-SLVK--------LSGNGGMAMRI 220 (268)
Q Consensus 156 ~Pdgia~d~dG~-l~va~~~~~~~~~~~v~~-~~~~g~~l~~i~~~~~----~~~~-~~~~--------~~~~~~~~~~~ 220 (268)
.|.+++++++|+ +|++...+ . +.. ...+++.+..++.+.. .+.. .+.+ .... +.+..+
T Consensus 186 ~~~~~~~s~dg~~l~~~~~~~--~----i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~v~~~ 258 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTNADG--E----LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA-AEVLVV 258 (353)
T ss_dssp TCCCCEEETTTTEEEEECTTS--E----EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS-SEEEEE
T ss_pred ccceEEECCCCCEEEEEcCCC--e----EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC-CEEEEE
Confidence 599999999997 66665533 2 333 3456777766654211 1111 1110 0011 223344
Q ss_pred CC-CCCEEEEEEcCCCCceeceEEEEE-eCCEEEEeeCCCCeEEEEeCCC
Q 024436 221 SE-QGNVLEILEEIGRKMWRSISEVEE-KDGNLWIGSVNMPYAGLYNYSS 268 (268)
Q Consensus 221 ~~-~G~~~~~~~~~~g~~~~~~s~~~~-~~g~Lyv~s~~~~~v~~~~~~~ 268 (268)
|. +++.+..+..+. . ...+.. .+++||+++..++.|.++++++
T Consensus 259 d~~~~~~~~~~~~~~--~---~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 259 DTRNGNILAKVAAPE--S---LAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp ETTTCCEEEEEECSS--C---CCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred ECCCCcEEEEEEcCC--C---ceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 44 244444443221 1 112222 3557999999999999999764
No 39
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.55 E-value=6.7e-13 Score=118.24 Aligned_cols=120 Identities=21% Similarity=0.156 Sum_probs=85.5
Q ss_pred CCCEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCeeEEEeecCCcceEEEEeCCCCe
Q 024436 22 TQGVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNHISVILSGDKTGRLMKYDPATKQ 101 (268)
Q Consensus 22 ~~~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 101 (268)
.-.++++.-+ +..|++++++|||++|+++ ..|+|++++ +|+ ...++. .+
T Consensus 20 ~~~~~~va~~-l~~P~~ia~~pdG~l~V~e-~~g~I~~i~-~g~-~~~~~~--------------~~------------- 68 (352)
T 2ism_A 20 GLRVEEVVGG-LEVPWALAFLPDGGMLIAE-RPGRIRLFR-EGR-LSTYAE--------------LS------------- 68 (352)
T ss_dssp CCCEEEEECC-CSCEEEEEECTTSCEEEEE-TTTEEEEEE-TTE-EEEEEE--------------CC-------------
T ss_pred CcEEEEEECC-CCCceEEEEcCCCeEEEEe-CCCeEEEEE-CCC-ccEeec--------------ce-------------
Confidence 3377777765 7899999999999966665 459999988 554 122110 00
Q ss_pred EEEeecCCCCcceEEEccC---CCEEEEEecCC-----cEEEEEEccCCCCCceeEEEe-CC------CCCCceEEcCCC
Q 024436 102 VTVLLGNLSFPNGVALSED---GNYILLAETTS-----CRILRYWLKTSKAGTIEIVAQ-LP------GFPDNIKRSPRG 166 (268)
Q Consensus 102 ~~~~~~~~~~pnGia~spd---g~~lyva~~~~-----~~I~~~~~~~~~~g~~~~~~~-l~------g~Pdgia~d~dG 166 (268)
+...+...|+||+++|| ++.|||+++.. ++|++|+.+++.+...+++.+ ++ ..|.+|++++||
T Consensus 69 --v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG 146 (352)
T 2ism_A 69 --VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG 146 (352)
T ss_dssp --CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS
T ss_pred --EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC
Confidence 12334577999999999 66899999864 899999998644333344332 43 258899999999
Q ss_pred CEEEEEec
Q 024436 167 GFWVGIHS 174 (268)
Q Consensus 167 ~l~va~~~ 174 (268)
+||++...
T Consensus 147 ~Lyv~~G~ 154 (352)
T 2ism_A 147 MLYVTTGE 154 (352)
T ss_dssp CEEEECCC
T ss_pred CEEEEECC
Confidence 99999754
No 40
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.54 E-value=5.8e-13 Score=120.66 Aligned_cols=157 Identities=13% Similarity=0.098 Sum_probs=112.6
Q ss_pred CCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC----------CCCCeeEEEeecC-CcceEEEEeCCC
Q 024436 32 GAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTS----------PNRNHISVILSGD-KTGRLMKYDPAT 99 (268)
Q Consensus 32 ~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~-~~g~v~~~d~~~ 99 (268)
.+..|+|+|+++ .+++|+++...++|.+++++|+....+.... +...++ ++++. ..++|++++.++
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~l--y~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFM--YWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEE--EEEECSSSCCEEEEETTS
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeE--EEEeCCCCCEEEEEeCCC
Confidence 467899999998 6777778888999999999987544433211 111222 22332 347899999984
Q ss_pred CeEEEe-ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC---CCCCCceEEcCCCCEEEEEecC
Q 024436 100 KQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL---PGFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 100 ~~~~~~-~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l---~g~Pdgia~d~dG~l~va~~~~ 175 (268)
...+.+ ..++..||||+++++++.||++|+..++|++++++|. .++.+... -..|.||+++. +++|++++..
T Consensus 235 ~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~ 310 (400)
T 3p5b_L 235 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN 310 (400)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CCEEEEECSSTTSSEEEEEEET-TEEEEEESSS
T ss_pred CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC---ccEEEEeCCCCCCCCEEEEEeC-CEEEEecCCC
Confidence 444444 4578999999999998899999999999999999873 34455432 24799999964 6899999988
Q ss_pred CCcceeeeEee-Cccceeeeecccc
Q 024436 176 RKGISKLVLSF-PWIGNVLIKLPID 199 (268)
Q Consensus 176 ~~~~~~~v~~~-~~~g~~l~~i~~~ 199 (268)
+. |.++ ..+|+.+..+..+
T Consensus 311 ~~-----V~~~~~~~G~~~~~i~~~ 330 (400)
T 3p5b_L 311 EA-----IFSANRLTGSDVNLLAEN 330 (400)
T ss_dssp CS-----EEEEESSSCCCCEEEECS
T ss_pred Ce-----EEEEEcCCCCceEEEecC
Confidence 74 5555 3677766666544
No 41
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=2.3e-12 Score=119.26 Aligned_cols=227 Identities=11% Similarity=0.043 Sum_probs=139.2
Q ss_pred CCCcceEEECCC--CCEEEEEeCCCeEEEEeCCCCeEEEEEEcCC---CCCee---------------EEEeecCCc---
Q 024436 33 AIGPESLAFDAL--GEGPYTGVSDGRIIKWHQDQRRWLHFARTSP---NRNHI---------------SVILSGDKT--- 89 (268)
Q Consensus 33 ~~~P~gia~~~d--G~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~---~~~~~---------------~~~~~~~~~--- 89 (268)
+..|.+++++|+ +++|++....++|.+++++++.+..+...+. ++++. ..++.+...
T Consensus 138 ~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 138 FSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp CCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred cCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 567999999983 6766666667899999988765555543321 01110 011222221
Q ss_pred ---ceEEEEeCCC-CeE------EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEcc-------CCCC------C-
Q 024436 90 ---GRLMKYDPAT-KQV------TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK-------TSKA------G- 145 (268)
Q Consensus 90 ---g~v~~~d~~~-~~~------~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~-------~~~~------g- 145 (268)
..|+.++.+. |++ ..+. .+..|+|++++|++++||+++..+++|++|+++ ++.. .
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred ccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 2477776543 233 2233 467899999999777899999999999999997 4432 0
Q ss_pred --ceeEEEeCC--CCCCceEEcCCCC-EEEEEecCCCcceeeeEeeCccc---ee-----eeec-cc-----------cc
Q 024436 146 --TIEIVAQLP--GFPDNIKRSPRGG-FWVGIHSRRKGISKLVLSFPWIG---NV-----LIKL-PI-----------DI 200 (268)
Q Consensus 146 --~~~~~~~l~--g~Pdgia~d~dG~-l~va~~~~~~~~~~~v~~~~~~g---~~-----l~~i-~~-----------~~ 200 (268)
..+.+..++ +.|.+|+++++|+ ||+++..+++ |.++..++ ++ +..- .. .+
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~-----I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f 371 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHY-----FMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARM 371 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE-----EEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBC
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCE-----EEEEecCCCcceecccEEecCCCCCCcccCCccccccc
Confidence 022333332 4689999999998 8999998874 44433322 11 1111 00 00
Q ss_pred eeee--eecc---------------ccCCCcEEEEEECCCCCEEEEEEcC--------------CCC-----ceeceEEE
Q 024436 201 VKIH--SSLV---------------KLSGNGGMAMRISEQGNVLEILEEI--------------GRK-----MWRSISEV 244 (268)
Q Consensus 201 ~~~~--~~~~---------------~~~~~~~~~~~~~~~G~~~~~~~~~--------------~g~-----~~~~~s~~ 244 (268)
..+. .+.. .... ..+.+++++|.+....-.. +|. .+..++++
T Consensus 372 ~~P~~gv~vd~~~~~~~~~g~lyVaD~~N--~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gI 449 (496)
T 3kya_A 372 NNPCQGVFVKNPDYTGEEEYDFYFVDRLN--FCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGL 449 (496)
T ss_dssp SSEEEEEEEECTTCCSSCCEEEEEEEGGG--TEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEE
T ss_pred CCCeEEEEEccccccccCCCeEEEEECCC--CEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEE
Confidence 0111 1110 1111 3566788889766555321 221 35667887
Q ss_pred EEe--CCEEEEeeCCCCeEEEEeCC
Q 024436 245 EEK--DGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 245 ~~~--~g~Lyv~s~~~~~v~~~~~~ 267 (268)
+.. +|.|||+...+++|-+++++
T Consensus 450 avd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 450 VYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCEEEEEeCCCCEEEEEECC
Confidence 765 38999999999999999865
No 42
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.53 E-value=7.2e-13 Score=111.76 Aligned_cols=174 Identities=19% Similarity=0.277 Sum_probs=113.3
Q ss_pred cCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc----------CCCCCeeEEEeecCCcceEEEEeCCC
Q 024436 30 IEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART----------SPNRNHISVILSGDKTGRLMKYDPAT 99 (268)
Q Consensus 30 ~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~~~~g~v~~~d~~~ 99 (268)
......|.+++++++|++|+++. +++|.++++++.....+... .+++. .++.....++|++++..+
T Consensus 63 ~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~---l~v~~~~~~~i~~~~~~~ 138 (270)
T 1rwi_B 63 FNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA---VYVADRGNNRVVKLAAGS 138 (270)
T ss_dssp CCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC---EEEEEGGGTEEEEECTTC
T ss_pred eCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC---EEEEECCCCEEEEEECCC
Confidence 34456899999999999766665 89999999887643322111 11111 122333457888887764
Q ss_pred CeEEE-eecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC-CCCCceEEcCCCCEEEEEecCCC
Q 024436 100 KQVTV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP-GFPDNIKRSPRGGFWVGIHSRRK 177 (268)
Q Consensus 100 ~~~~~-~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~-g~Pdgia~d~dG~l~va~~~~~~ 177 (268)
..... ...++..|++|+++++|+ ||+++..+++|++|+.++.. ........ ..|.+|++|++|++|++....+.
T Consensus 139 ~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~ 214 (270)
T 1rwi_B 139 KTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNN---QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ 214 (270)
T ss_dssp CSCEECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCC---EEECCCSSCCSEEEEEECTTCCEEEEETTTSC
T ss_pred ceeEeeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCc---eEeecccCCCCceEEEECCCCCEEEEECCCCc
Confidence 43332 234567899999999997 99999988999999987532 11111111 46999999999999999987764
Q ss_pred cceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEE
Q 024436 178 GISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVL 227 (268)
Q Consensus 178 ~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 227 (268)
|.++...++....++.. .... ...+.++++|++.
T Consensus 215 -----v~~~~~~~~~~~~~~~~----------~~~~-p~~i~~~~~g~l~ 248 (270)
T 1rwi_B 215 -----VVKLLAGSTTSTVLPFT----------GLNT-PLAVAVDSDRTVY 248 (270)
T ss_dssp -----EEEECTTCSCCEECCCC----------SCSC-EEEEEECTTCCEE
T ss_pred -----EEEEcCCCCcceeeccC----------CCCC-ceeEEECCCCCEE
Confidence 66776666543332211 0011 3456777777643
No 43
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.52 E-value=3.1e-12 Score=109.86 Aligned_cols=218 Identities=12% Similarity=0.145 Sum_probs=136.9
Q ss_pred cCCCEEEEecCCCCCcceEEECCCCC-EEEEEeCCCeEEEEeCCCCeEEEEEEc---------CCCCCeeEEEeecCCcc
Q 024436 21 STQGVVQYQIEGAIGPESLAFDALGE-GPYTGVSDGRIIKWHQDQRRWLHFART---------SPNRNHISVILSGDKTG 90 (268)
Q Consensus 21 ~~~~~~~i~~~~~~~P~gia~~~dG~-~l~~~~~~g~I~~~~~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~g 90 (268)
....++.+.-+ ...|+|++++|+|+ +++++..+++|.++++++. ...+... .+++. .+......+
T Consensus 16 ~~~~~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~---l~v~~~~~~ 90 (296)
T 3e5z_A 16 AGAEARRLADG-FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGH---LIACSHGLR 90 (296)
T ss_dssp TTCCCEEEECC-CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCC---EEEEETTTT
T ss_pred CCCcEEEEecC-CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCc---EEEEecCCC
Confidence 34466777754 67899999999998 8888888999999999876 4444321 11222 122334457
Q ss_pred eEEEEeCCCCeEEEeec-----CCCCcceEEEccCCCEEEEEec-----------------CCcEEEEEEccCCCCCcee
Q 024436 91 RLMKYDPATKQVTVLLG-----NLSFPNGVALSEDGNYILLAET-----------------TSCRILRYWLKTSKAGTIE 148 (268)
Q Consensus 91 ~v~~~d~~~~~~~~~~~-----~~~~pnGia~spdg~~lyva~~-----------------~~~~I~~~~~~~~~~g~~~ 148 (268)
.|+++|+++++.+.+.. ....||+++++|||+ ||+++. ..++|++++.++ ...
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g----~~~ 165 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG----TLS 165 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS----CEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCCC----CEE
Confidence 89999997788776542 245789999999996 999864 245899998763 233
Q ss_pred EEEeCCCCCCceEEcCCCCEEEEEecCCCcceeeeEeeCc--ccee---eeeccccceeeeeeccccCCCcEEEEEECCC
Q 024436 149 IVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPW--IGNV---LIKLPIDIVKIHSSLVKLSGNGGMAMRISEQ 223 (268)
Q Consensus 149 ~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~~--~g~~---l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (268)
.+......|.|+++++||+++++....+ + |.++.. .|++ ...+.... ..|. .+.++++
T Consensus 166 ~~~~~~~~~~gi~~s~dg~~lv~~~~~~-~----i~~~~~~~~g~~~~~~~~~~~~~---------~~p~---~i~~d~~ 228 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGNLLVSDTGDN-A----THRYCLNARGETEYQGVHFTVEP---------GKTD---GLRVDAG 228 (296)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTT-E----EEEEEECSSSCEEEEEEEECCSS---------SCCC---SEEEBTT
T ss_pred EeecCCCCCccEEECCCCCEEEEeCCCC-e----EEEEEECCCCcCcCCCeEeeCCC---------CCCC---eEEECCC
Confidence 3433334799999999999777776554 3 444432 3444 11110000 1111 2344444
Q ss_pred CCE-------EEEEEcCCCCceec------eEEEEE---eCCEEEEeeCCCCeEEEEeCCC
Q 024436 224 GNV-------LEILEEIGRKMWRS------ISEVEE---KDGNLWIGSVNMPYAGLYNYSS 268 (268)
Q Consensus 224 G~~-------~~~~~~~~g~~~~~------~s~~~~---~~g~Lyv~s~~~~~v~~~~~~~ 268 (268)
|++ +..+ +++|+.+.. ++.++. .+++||+++ .+.+.+++.++
T Consensus 229 G~l~v~~~~~v~~~-~~~g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t--~~~l~~~~~~~ 286 (296)
T 3e5z_A 229 GLIWASAGDGVHVL-TPDGDELGRVLTPQTTSNLCFGGPEGRTLYMTV--STEFWSIETNV 286 (296)
T ss_dssp SCEEEEETTEEEEE-CTTSCEEEEEECSSCCCEEEEESTTSCEEEEEE--TTEEEEEECSC
T ss_pred CCEEEEcCCeEEEE-CCCCCEEEEEECCCCceeEEEECCCCCEEEEEc--CCeEEEEEccc
Confidence 443 3333 345654322 344444 235799997 99999998764
No 44
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.52 E-value=1.1e-12 Score=115.29 Aligned_cols=166 Identities=12% Similarity=0.072 Sum_probs=108.2
Q ss_pred EEEEecCCC----CCcceEEECCCCCEEEEEe-CCCeEEEEeCCCCeEEEEEEcCC--CC----CeeEEEeecCC-----
Q 024436 25 VVQYQIEGA----IGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSP--NR----NHISVILSGDK----- 88 (268)
Q Consensus 25 ~~~i~~~~~----~~P~gia~~~dG~~l~~~~-~~g~I~~~~~~g~~~~~~~~~~~--~~----~~~~~~~~~~~----- 88 (268)
...++++.. ..|+++++ .++++|+++. .+++|..+++....+......+. .. +-...++....
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTC
T ss_pred EEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCC
Confidence 345666542 27999999 5666555555 38999999987543333222211 11 00011222222
Q ss_pred -----cceEEEEeCCCCeEEEeec--CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC-CCCCCce
Q 024436 89 -----TGRLMKYDPATKQVTVLLG--NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-PGFPDNI 160 (268)
Q Consensus 89 -----~g~v~~~d~~~~~~~~~~~--~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l-~g~Pdgi 160 (268)
.+.|+++|++++++..... ....|++|+++||+++||+++. .|++|+.+++++.. ..+... ...|+||
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~-~~~~~~~~~~p~gi 272 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPV-RPFLEFRDTKYYGL 272 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCS-SCSBCCCSSCEEEE
T ss_pred ccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceee-eeeecCCCCceEEE
Confidence 3789999999888764432 2357999999999999999986 89999987644321 112121 2479999
Q ss_pred EEcC-CCCEEEEE----ecCCCcceeeeEeeCccceeeeeccccc
Q 024436 161 KRSP-RGGFWVGI----HSRRKGISKLVLSFPWIGNVLIKLPIDI 200 (268)
Q Consensus 161 a~d~-dG~l~va~----~~~~~~~~~~v~~~~~~g~~l~~i~~~~ 200 (268)
++|| +|+|||+. ...+. |.+|.+.|+++.+++.+.
T Consensus 273 ~vdp~~g~lyva~~~~y~~~~~-----V~v~d~~g~~~~~i~~G~ 312 (328)
T 3dsm_A 273 TVNPNNGEVYVADAIDYQQQGI-----VYRYSPQGKLIDEFYVGI 312 (328)
T ss_dssp EECTTTCCEEEEECTTSSSEEE-----EEEECTTCCEEEEEEEEE
T ss_pred EEcCCCCeEEEEcccccccCCE-----EEEECCCCCEEEEEEecc
Confidence 9998 67899999 44443 777777788888877653
No 45
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.51 E-value=8e-14 Score=134.86 Aligned_cols=194 Identities=11% Similarity=0.057 Sum_probs=123.2
Q ss_pred CCCCCcceEEECCC-CCEEEEEeCCCeEEEEeCCC----CeEEEEEEc---CCCC---Ce--eEEEeecCCcceEEEEeC
Q 024436 31 EGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQ----RRWLHFART---SPNR---NH--ISVILSGDKTGRLMKYDP 97 (268)
Q Consensus 31 ~~~~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g----~~~~~~~~~---~~~~---~~--~~~~~~~~~~g~v~~~d~ 97 (268)
+.+..|++++++++ +.+|+++...++|+++++++ .....+... .+.+ .+ ...++.+...++|+++++
T Consensus 403 ~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 403 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 34568999999985 55566667789999999876 211111100 0111 00 012335556789999999
Q ss_pred CCCeEEEee-cCCCCcceEEEccCCCEEEEEecCC-cEEEEEEccCCCCCceeEEEe-CCCCCCceEEcCC-CCEEEEEe
Q 024436 98 ATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPR-GGFWVGIH 173 (268)
Q Consensus 98 ~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~-~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~d-G~l~va~~ 173 (268)
++...+.+. .++..|+||+++|++++||+++... ++|++++++|.. ..++.. .-..|.||++|++ ++||+++.
T Consensus 483 dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~---~~~l~~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 483 KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC---CCEESCSSCSSCCCEEECTTTCCEEEEET
T ss_pred CCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC---eeEEEeCCCCCccEEEEeccCCEEEEEec
Confidence 855555554 4678899999999877899999876 899999998632 233322 1247999999986 57999997
Q ss_pred cCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEE
Q 024436 174 SRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWI 253 (268)
Q Consensus 174 ~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv 253 (268)
..+. |.++. .+|....++.... ..+..+.+++..+++||+
T Consensus 560 ~~~~-----I~~~d----------------------------------~dG~~~~~~~~~~-~~~~~P~glavd~~~lyw 599 (699)
T 1n7d_A 560 KLHS-----ISSID----------------------------------VNGGNRKTILEDE-KRLAHPFSLAVFEDKVFW 599 (699)
T ss_dssp TTTE-----EEEEC----------------------------------SSSSCCEEECCCS-SSCSSCCCCEEETTEEEE
T ss_pred CCCe-----EEEEc----------------------------------cCCCceEEEEecC-CcCCCceEeEEECCEEEE
Confidence 6652 33333 3332222221111 113334455556678888
Q ss_pred eeCCCCeEEEEeCC
Q 024436 254 GSVNMPYAGLYNYS 267 (268)
Q Consensus 254 ~s~~~~~v~~~~~~ 267 (268)
+.+..++|.+++..
T Consensus 600 td~~~~~V~~~d~~ 613 (699)
T 1n7d_A 600 TDIINEAIFSANRL 613 (699)
T ss_dssp ECSTTTCEEEEETT
T ss_pred EeCCCCeEEEEEcc
Confidence 88888888888753
No 46
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.51 E-value=9.3e-13 Score=120.43 Aligned_cols=148 Identities=11% Similarity=0.067 Sum_probs=96.6
Q ss_pred CCCCcceEEECC--CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC---------CCCCeeE--EEeecCCcceEEEEeCC
Q 024436 32 GAIGPESLAFDA--LGEGPYTGVSDGRIIKWHQDQRRWLHFARTS---------PNRNHIS--VILSGDKTGRLMKYDPA 98 (268)
Q Consensus 32 ~~~~P~gia~~~--dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~---------~~~~~~~--~~~~~~~~g~v~~~d~~ 98 (268)
++..|.+++++| +|.+|+++.. ++|.++++++..+..+.... +.+++++ +.........++.++++
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 467899999997 4776666655 99999999886555443211 1112121 11111112246666655
Q ss_pred CCeEE--EeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC--CCCCceEEcCCCC-EEEEEe
Q 024436 99 TKQVT--VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP--GFPDNIKRSPRGG-FWVGIH 173 (268)
Q Consensus 99 ~~~~~--~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~--g~Pdgia~d~dG~-l~va~~ 173 (268)
+... .....+..|+|++++|++..|||++..+++|++|+.++.. ...+...+ ..|.+|++|++|+ ||+++.
T Consensus 214 -g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~---~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 214 -SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE---TTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp -GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE---EEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred -CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc---EEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 3222 2223578899999999444699999999999999998532 22333332 4699999999998 999998
Q ss_pred cCCCcceeeeEeeCcc
Q 024436 174 SRRKGISKLVLSFPWI 189 (268)
Q Consensus 174 ~~~~~~~~~v~~~~~~ 189 (268)
..++ |.++..+
T Consensus 290 ~~~~-----I~~~~~d 300 (430)
T 3tc9_A 290 NQHY-----ILRSDYD 300 (430)
T ss_dssp TTTE-----EEEEEEE
T ss_pred CCCE-----EEEEeCC
Confidence 8874 5555433
No 47
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=2.1e-11 Score=105.30 Aligned_cols=213 Identities=9% Similarity=0.071 Sum_probs=131.7
Q ss_pred EEEecCCCCCcceEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEEEE--------cCCCCCeeEEEeecCCcceEEEEe
Q 024436 26 VQYQIEGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFAR--------TSPNRNHISVILSGDKTGRLMKYD 96 (268)
Q Consensus 26 ~~i~~~~~~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~g~v~~~d 96 (268)
+.+.-.+..-+||++++++ +.+++++..+++|+++++++.....+.. ..+++.+.. .. ...|+++|
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v---~~--~~~l~~~d 79 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVA---TI--GTKFCALN 79 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEE---EE--TTEEEEEE
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEE---EE--CCeEEEEE
Confidence 3433444678999999994 6778888889999999987654332211 112222211 11 35899999
Q ss_pred CCCCeEEEeecC-----CCCcceEEEccCCCEEEEEec-----------CCcEEEEEEccCCCCCceeEEEeCCCCCCce
Q 024436 97 PATKQVTVLLGN-----LSFPNGVALSEDGNYILLAET-----------TSCRILRYWLKTSKAGTIEIVAQLPGFPDNI 160 (268)
Q Consensus 97 ~~~~~~~~~~~~-----~~~pnGia~spdg~~lyva~~-----------~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgi 160 (268)
+++++++.+... ...||+++++|||+ +|+++. ..++|++++.++ ....+......|+|+
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g----~~~~~~~~~~~pngi 154 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH----HVKKYFDQVDISNGL 154 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS----CEEEEEEEESBEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCC----CEEEEeeccccccce
Confidence 988888766532 34689999999997 888874 345888888754 223332212369999
Q ss_pred EEcCCCC-EEEEEecCCCcceeeeEeeC---cccee-----eeeccccceeeee-ecc-------ccCCCcEEEEEECCC
Q 024436 161 KRSPRGG-FWVGIHSRRKGISKLVLSFP---WIGNV-----LIKLPIDIVKIHS-SLV-------KLSGNGGMAMRISEQ 223 (268)
Q Consensus 161 a~d~dG~-l~va~~~~~~~~~~~v~~~~---~~g~~-----l~~i~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~ 223 (268)
++++||+ ||++....+ + |.++. .+|++ +..++.....+.. ++. ..... +.+.+++++
T Consensus 155 ~~spdg~~lyv~~~~~~-~----i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-~~v~~~d~~ 228 (297)
T 3g4e_A 155 DWSLDHKIFYYIDSLSY-S----VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-GRVIRLDPV 228 (297)
T ss_dssp EECTTSCEEEEEEGGGT-E----EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-TEEEEECTT
T ss_pred EEcCCCCEEEEecCCCC-c----EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-CEEEEEcCC
Confidence 9999996 889887665 3 44442 34432 2222211001110 110 11111 357888886
Q ss_pred -CCEEEEEEcCCCCceeceEEEEEe---CCEEEEeeCCC
Q 024436 224 -GNVLEILEEIGRKMWRSISEVEEK---DGNLWIGSVNM 258 (268)
Q Consensus 224 -G~~~~~~~~~~g~~~~~~s~~~~~---~g~Lyv~s~~~ 258 (268)
|+++..+..+. ..++.++.. +++|||++...
T Consensus 229 tG~~~~~i~~p~----~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 229 TGKRLQTVKLPV----DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp TCCEEEEEECSS----SBEEEEEEESGGGCEEEEEEBCT
T ss_pred CceEEEEEECCC----CCceEEEEeCCCCCEEEEEcCCc
Confidence 88888887652 335565553 36899998754
No 48
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.50 E-value=1.1e-11 Score=105.98 Aligned_cols=164 Identities=10% Similarity=0.040 Sum_probs=107.1
Q ss_pred CCEEEEecCCCCCcceEEECCCCCEEEEEe---CCCeEEEEeCCCCeEEEEEEcCCCCCee--------EEEeecCCcce
Q 024436 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGV---SDGRIIKWHQDQRRWLHFARTSPNRNHI--------SVILSGDKTGR 91 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~~~dG~~l~~~~---~~g~I~~~~~~g~~~~~~~~~~~~~~~~--------~~~~~~~~~g~ 91 (268)
+-++++++++-..|+|+++++||. +|++. .+++|..+++............ .+.+. ..+......+.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~-~~~fgeGi~~~g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVENIHKMD-DSYFGEGLTLLNEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEETTCSE
T ss_pred eEEEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEEEEEecC-CCcceEEEEEeCCEEEEEEecCCE
Confidence 367889999755789999999986 55543 3689999998643333322221 11111 11223346789
Q ss_pred EEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE--eC--C-CCCCceEEcCCC
Q 024436 92 LMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA--QL--P-GFPDNIKRSPRG 166 (268)
Q Consensus 92 v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~--~l--~-g~Pdgia~d~dG 166 (268)
++++|+++.++..-.... .|.|..+++||++||+++ .+++|+++|.++.+. ...+. .- | ..|+++.+. +|
T Consensus 88 v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v--~~~I~Vg~~~~p~~~~nele~~-dg 162 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKL--IKKHNVKYNGHRVIRLNELEYI-NG 162 (266)
T ss_dssp EEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCE--EEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcE--EEEEEECCCCcccccceeEEEE-CC
Confidence 999999887765444322 578899999999999999 689999999875321 11111 11 1 247788888 78
Q ss_pred CEEEEEecCCCcceeeeEe-eCccceeeeeccc
Q 024436 167 GFWVGIHSRRKGISKLVLS-FPWIGNVLIKLPI 198 (268)
Q Consensus 167 ~l~va~~~~~~~~~~~v~~-~~~~g~~l~~i~~ 198 (268)
.+|++.+..+. |.+ .+.+++++..+++
T Consensus 163 ~lyvn~~~~~~-----V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 163 EVWANIWQTDC-----IARISAKDGTLLGWILL 190 (266)
T ss_dssp EEEEEETTSSE-----EEEEETTTCCEEEEEEC
T ss_pred EEEEecCCCCe-----EEEEECCCCcEEEEEEC
Confidence 99999887653 333 4556666666665
No 49
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.49 E-value=3.6e-11 Score=104.40 Aligned_cols=216 Identities=13% Similarity=0.029 Sum_probs=129.8
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc---------CCCCC-eeEEEeecCCcceEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART---------SPNRN-HISVILSGDKTGRLM 93 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~---------~~~~~-~~~~~~~~~~~g~v~ 93 (268)
-+..++.+ ..|++++++++|++|+++..+++|++++++++. ..+... .+++. |+.+ ......+|+
T Consensus 24 ~~~~~p~~--~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~~~~~~p~gia~~~dG~l~vad--~~~~~~~v~ 98 (306)
T 2p4o_A 24 IITSFPVN--TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHATVEGKVSGLAFTSNGDLVATG--WNADSIPVV 98 (306)
T ss_dssp EEEEECTT--CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEEECSSEEEEEEECTTSCEEEEE--ECTTSCEEE
T ss_pred EeEeCCCC--CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEEeCCCCceeEEEcCCCcEEEEe--ccCCcceEE
Confidence 44555555 489999999999988888889999999999864 222211 12222 2221 112234699
Q ss_pred EEeCCCCeEEEee--cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE--------e-CC--CCCCce
Q 024436 94 KYDPATKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA--------Q-LP--GFPDNI 160 (268)
Q Consensus 94 ~~d~~~~~~~~~~--~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~--------~-l~--g~Pdgi 160 (268)
++|+.+++++.+. ....+++|++..+++ .+|+++..+++|++++.+++. .+++. . .. ..|+||
T Consensus 99 ~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~---~~v~~~~~~~~~~~~~~~~~~pngi 174 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPS---GSIWLEHPMLARSNSESVFPAANGL 174 (306)
T ss_dssp EEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTE---EEEEEECGGGSCSSTTCCSCSEEEE
T ss_pred EEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCc---EeEEEECCccccccccCCCCcCCCc
Confidence 9998778877654 346789999998765 799999989999999986421 11210 0 01 258898
Q ss_pred EEcCCC-CEEEEEecCCCcceeeeEeeCcc--cee-----eeecccccee-ee---eeccccCCCcEEEEEECCCCCEEE
Q 024436 161 KRSPRG-GFWVGIHSRRKGISKLVLSFPWI--GNV-----LIKLPIDIVK-IH---SSLVKLSGNGGMAMRISEQGNVLE 228 (268)
Q Consensus 161 a~d~dG-~l~va~~~~~~~~~~~v~~~~~~--g~~-----l~~i~~~~~~-~~---~~~~~~~~~~~~~~~~~~~G~~~~ 228 (268)
++|| .||+++...+. |.++... |++ +.....|..- +. .++-..... ..+.+++++|+...
T Consensus 175 --s~dg~~lyv~d~~~~~-----I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~-~~V~~~~~~G~~~~ 246 (306)
T 2p4o_A 175 --KRFGNFLYVSNTEKML-----LLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIY-NSVVRIAPDRSTTI 246 (306)
T ss_dssp --EEETTEEEEEETTTTE-----EEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTT-CCEEEECTTCCEEE
T ss_pred --CcCCCEEEEEeCCCCE-----EEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCC-CeEEEECCCCCEEE
Confidence 6666 59999988764 5555433 321 2221111100 00 001011112 34777888887654
Q ss_pred EEEcCCCCceeceEEEEEe-----CCEEEEeeCCC
Q 024436 229 ILEEIGRKMWRSISEVEEK-----DGNLWIGSVNM 258 (268)
Q Consensus 229 ~~~~~~g~~~~~~s~~~~~-----~g~Lyv~s~~~ 258 (268)
...-+.+ +..++.++.. +++|||++..+
T Consensus 247 ~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 247 IAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EECGGGT--CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred Eeecccc--cCCceEEEEecccCCCCEEEEECCCC
Confidence 3322211 3456776653 37999998764
No 50
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.48 E-value=3e-11 Score=105.99 Aligned_cols=218 Identities=11% Similarity=0.044 Sum_probs=130.3
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEEEcCCCCCee------EEEeecCCcceEEEEeCCCCeEEEee
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFARTSPNRNHI------SVILSGDKTGRLMKYDPATKQVTVLL 106 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~~~~~~~~~~------~~~~~~~~~g~v~~~d~~~~~~~~~~ 106 (268)
..|++++++ ++++|++...++.|..+++. ++....+. .......+ ..+......+.|+++|++++++....
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 368999985 46656666668999999986 44323332 11110000 11223224689999999988876544
Q ss_pred cCCC------CcceEEEccCCCEEEEEec-CCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecC----
Q 024436 107 GNLS------FPNGVALSEDGNYILLAET-TSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSR---- 175 (268)
Q Consensus 107 ~~~~------~pnGia~spdg~~lyva~~-~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~---- 175 (268)
.... .|++|++ +++.|||++. ..++|.++++++.+ ..........|.++++|++|++|++....
T Consensus 122 ~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~---~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDK---VVDELTIGIQPTSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp ECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTE---EEEEEECSSCBCCCEECTTSEEEEEBCCBCTTC
T ss_pred EcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCe---EEEEEEcCCCccceEEcCCCCEEEEECCCccCC
Confidence 3334 8999999 4558999998 48899999987532 22122334579999999999999998764
Q ss_pred -----CCcceeeeEee-Cccceeeeeccccc-eeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCc---------ee
Q 024436 176 -----RKGISKLVLSF-PWIGNVLIKLPIDI-VKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKM---------WR 239 (268)
Q Consensus 176 -----~~~~~~~v~~~-~~~g~~l~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~---------~~ 239 (268)
... |.++ +.++++...+..+. ..+..+. .++....++..+. -+..++...++. ..
T Consensus 197 ~~~~~~~~----v~~id~~t~~v~~~~~~~~g~~p~~la--~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~ 267 (328)
T 3dsm_A 197 PYGYEAPS----LYRIDAETFTVEKQFKFKLGDWPSEVQ--LNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEFRDT 267 (328)
T ss_dssp SSCBCCCE----EEEEETTTTEEEEEEECCTTCCCEEEE--ECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCCCSS
T ss_pred ccccCCce----EEEEECCCCeEEEEEecCCCCCceeEE--EecCCCEEEEEcc---EEEEEECCCCceeeeeeecCCCC
Confidence 112 5454 45677777766531 1111111 0111022333332 122333333331 12
Q ss_pred ceEEEEE--eCCEEEEee----CCCCeEEEEeCC
Q 024436 240 SISEVEE--KDGNLWIGS----VNMPYAGLYNYS 267 (268)
Q Consensus 240 ~~s~~~~--~~g~Lyv~s----~~~~~v~~~~~~ 267 (268)
.+..++. .+++||+++ ..+++|.+++.+
T Consensus 268 ~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 268 KYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 3555554 378999999 889999999864
No 51
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.47 E-value=3.7e-12 Score=111.68 Aligned_cols=176 Identities=17% Similarity=0.191 Sum_probs=111.2
Q ss_pred CCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCC--eEEEEEEc------------------CC-CCCeeEEEeecC-C
Q 024436 31 EGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR--RWLHFART------------------SP-NRNHISVILSGD-K 88 (268)
Q Consensus 31 ~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~--~~~~~~~~------------------~~-~~~~~~~~~~~~-~ 88 (268)
+.+..|.+++++++|++|+++..+++|.+++++|+ .+..+... .+ ++ ..++.+. .
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g---~lyv~d~~~ 164 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG---AVFVSDGYC 164 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC---CEEEEECSS
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC---eEEEEeCCC
Confidence 44678999999999998888888999999999886 33333211 11 11 1223343 5
Q ss_pred cceEEEEeCCCCeEEEee-----------cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CCC
Q 024436 89 TGRLMKYDPATKQVTVLL-----------GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPG 155 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~-----------~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~g 155 (268)
+++|++++++ ++..... ..+..|+||+++|++..|||++..+++|.+|+.++++. ...+.. ...
T Consensus 165 ~~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~~~~~~~~ 241 (329)
T 3fvz_A 165 NSRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREIKHASFGR 241 (329)
T ss_dssp CCEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEECCTTTTT
T ss_pred CCeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEEeccccCC
Confidence 7789999877 5443332 23466999999999668999999999999999983221 122211 111
Q ss_pred CCC------ceEEcCCCCEEEEEecCCCcceeeeEeeC-ccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCE
Q 024436 156 FPD------NIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNV 226 (268)
Q Consensus 156 ~Pd------gia~d~dG~l~va~~~~~~~~~~~v~~~~-~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 226 (268)
.|. |+.++.+|++|++...... +..+. .+|+++..+..... .... ...+.++++|.+
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~~~-----v~~~~~~~g~~~~~~~~~~~--------~~~~-p~~ia~~~dG~l 305 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEPVQ-----GFVMNFSSGEIIDVFKPVRK--------HFDM-PHDIVASEDGTV 305 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCCCC-----EEEEETTTCCEEEEECCSSS--------CCSS-EEEEEECTTSEE
T ss_pred CcceeeecCCEEEEeCCCEEeccCCCcE-----EEEEEcCCCeEEEEEcCCCC--------ccCC-eeEEEECCCCCE
Confidence 233 5555557777777665543 44443 56777776542110 0111 446778888843
No 52
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.46 E-value=1.9e-11 Score=108.98 Aligned_cols=148 Identities=16% Similarity=0.116 Sum_probs=97.5
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc---------------CCC---CCeeEEEee
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART---------------SPN---RNHISVILS 85 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~---------------~~~---~~~~~~~~~ 85 (268)
.++++.-+ +..|++++++|||++|++.. .|+|++++++|+ ..+... .++ ..+++....
T Consensus 20 ~~~~va~~-l~~P~~ia~~pdG~l~V~e~-~g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 20 KISEVASD-LEVPWSIAPLGGGRYLVTER-PGRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp EEEEEECS-CSCEEEEEEEETTEEEEEET-TTEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEEEEeCC-CCCCeEEEEcCCCeEEEEeC-CCEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 66666654 78999999999999666654 599999987775 333211 111 112222222
Q ss_pred c-CCc----ceEEEEeCCCC-----eEEEee-----cCCCCcceEEEccCCCEEEEEecC-------------CcEEEEE
Q 024436 86 G-DKT----GRLMKYDPATK-----QVTVLL-----GNLSFPNGVALSEDGNYILLAETT-------------SCRILRY 137 (268)
Q Consensus 86 ~-~~~----g~v~~~d~~~~-----~~~~~~-----~~~~~pnGia~spdg~~lyva~~~-------------~~~I~~~ 137 (268)
. ... .+|++++.+++ +.+.+. ...+.+++|+|+|||+ |||+... .++|+|+
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri 174 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRV 174 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEE
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEE
Confidence 1 112 68888887643 123332 2346789999999995 9999642 3689999
Q ss_pred EccCCCC-----CceeEEEeCCCCCCceEEcC-CCCEEEEEecCC
Q 024436 138 WLKTSKA-----GTIEIVAQLPGFPDNIKRSP-RGGFWVGIHSRR 176 (268)
Q Consensus 138 ~~~~~~~-----g~~~~~~~l~g~Pdgia~d~-dG~l~va~~~~~ 176 (268)
+.++... ...+++..--..|.||++|+ +|+||+++.+.+
T Consensus 175 ~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~ 219 (354)
T 3a9g_A 175 DEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPV 219 (354)
T ss_dssp CTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSS
T ss_pred cCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCC
Confidence 9986311 02355554223699999999 799999998875
No 53
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.46 E-value=2.7e-13 Score=131.13 Aligned_cols=157 Identities=13% Similarity=0.104 Sum_probs=110.0
Q ss_pred CCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC---CC-------CCeeEEEeecCC-cceEEEEeCCCC
Q 024436 33 AIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTS---PN-------RNHISVILSGDK-TGRLMKYDPATK 100 (268)
Q Consensus 33 ~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~---~~-------~~~~~~~~~~~~-~g~v~~~d~~~~ 100 (268)
+..|+|||+++ .|++|+++...++|.+++++|+....+.... |. ..++ ++++.. .++|+++++++.
T Consensus 452 ~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~l--y~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 452 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFM--YWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp C--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCC--EECCCSSSCCEEBCCSSSC
T ss_pred CCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcE--EEcccCCCCeEEEEeCCCC
Confidence 45799999995 5676777777899999999987544443211 11 1122 223333 378999988733
Q ss_pred eEEEe-ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC---CCCCCceEEcCCCCEEEEEecCC
Q 024436 101 QVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL---PGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 101 ~~~~~-~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l---~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
..+.+ ...+..||||+++|++++|||+++..++|++++++|. .++++... ...|+||++|.+ +||++.+..+
T Consensus 530 ~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~ 605 (699)
T 1n7d_A 530 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFED-KVFWTDIINE 605 (699)
T ss_dssp CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS---CCEEECCCSSSCSSCCCCEEETT-EEEEECSTTT
T ss_pred CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC---ceEEEEecCCcCCCceEeEEECC-EEEEEeCCCC
Confidence 33333 3568899999999998899999999999999999863 24444432 247999999975 7999998877
Q ss_pred CcceeeeEeeC-ccceeeeeccccc
Q 024436 177 KGISKLVLSFP-WIGNVLIKLPIDI 200 (268)
Q Consensus 177 ~~~~~~v~~~~-~~g~~l~~i~~~~ 200 (268)
. |.++. .+|+.+..|..+.
T Consensus 606 ~-----V~~~d~~~G~~~~~i~~~~ 625 (699)
T 1n7d_A 606 A-----IFSANRLTGSDVNLLAENL 625 (699)
T ss_dssp C-----EEEEETTTEEEEECCCTTC
T ss_pred e-----EEEEEccCCCceEEeecCC
Confidence 4 66664 5788888776654
No 54
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.46 E-value=3e-12 Score=116.24 Aligned_cols=140 Identities=16% Similarity=0.228 Sum_probs=97.7
Q ss_pred CCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC---CC--CCe---------eEEEeecCCcceEEEEe
Q 024436 32 GAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTS---PN--RNH---------ISVILSGDKTGRLMKYD 96 (268)
Q Consensus 32 ~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~---~~--~~~---------~~~~~~~~~~g~v~~~d 96 (268)
....|++++++| +|. +|+...+++|+++++++.....++... .. .++ -..++.+...++|++++
T Consensus 217 ~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~ 295 (409)
T 3hrp_A 217 FSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKIT 295 (409)
T ss_dssp SCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred hcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEe
Confidence 356899999999 566 555566899999998765444442211 00 001 11233455678899998
Q ss_pred CCCCeEEEeecC---------------CCCcceEEEccCCCEEEEEec-CCcEEEEEEccCCCCCceeEEEeC-------
Q 024436 97 PATKQVTVLLGN---------------LSFPNGVALSEDGNYILLAET-TSCRILRYWLKTSKAGTIEIVAQL------- 153 (268)
Q Consensus 97 ~~~~~~~~~~~~---------------~~~pnGia~spdg~~lyva~~-~~~~I~~~~~~~~~~g~~~~~~~l------- 153 (268)
++ +++..+... +..|+||+++|||+ |||+|+ .+++|++|++.++ ....+...
T Consensus 296 ~~-g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G---~v~~~~g~~~~~g~~ 370 (409)
T 3hrp_A 296 PD-GECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDG---YVSTVAGQVDVASQI 370 (409)
T ss_dssp TT-CCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTT---EEEEEEECTTCBSCC
T ss_pred cC-CCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCC---EEEEEeCCCCCCCcC
Confidence 87 555555432 57899999999997 999999 9999999995432 23333221
Q ss_pred --------CCCCCceEEcCCCCEEEEEecCCC
Q 024436 154 --------PGFPDNIKRSPRGGFWVGIHSRRK 177 (268)
Q Consensus 154 --------~g~Pdgia~d~dG~l~va~~~~~~ 177 (268)
-..|+||++|++|+|||+++.+++
T Consensus 371 ~g~~~~~~~~~P~giavd~~g~lyVad~~n~~ 402 (409)
T 3hrp_A 371 DGTPLEATFNYPYDICYDGEGGYWIAEAWGKA 402 (409)
T ss_dssp CBSTTTCCBSSEEEEEECSSSEEEEEESTTCE
T ss_pred CCChhceEeCCceEEEEcCCCCEEEEECCCCe
Confidence 035999999999999999999874
No 55
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.46 E-value=2.6e-12 Score=117.57 Aligned_cols=143 Identities=13% Similarity=0.024 Sum_probs=88.2
Q ss_pred CCCCcceEEECCC---CCEEEEEeCCCeEEEEeCCCCeEEEEEEcC---------CCCC-eeEEEeecCCcceEEEEeCC
Q 024436 32 GAIGPESLAFDAL---GEGPYTGVSDGRIIKWHQDQRRWLHFARTS---------PNRN-HISVILSGDKTGRLMKYDPA 98 (268)
Q Consensus 32 ~~~~P~gia~~~d---G~~l~~~~~~g~I~~~~~~g~~~~~~~~~~---------~~~~-~~~~~~~~~~~g~v~~~d~~ 98 (268)
.+..|.+++++|+ |++|+++.. ++|.++++++..+..+.... +++. |+.+.........++.++++
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 5678999999985 887777666 99999998544444443210 1111 11111000011224444433
Q ss_pred CCeE-EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC--CCCCCceEEcCCCC-EEEEEec
Q 024436 99 TKQV-TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL--PGFPDNIKRSPRGG-FWVGIHS 174 (268)
Q Consensus 99 ~~~~-~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l--~g~Pdgia~d~dG~-l~va~~~ 174 (268)
.+.. ......+..|+|++++|++..|||++..+++|++|+.+++.. ...+... ...+.+|++|++|+ ||+++..
T Consensus 216 ~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~--~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 216 SGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL--TEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE--EEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE--EEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 2211 112235788999999994446999999999999999874321 1222222 23466899999998 9999998
Q ss_pred CCC
Q 024436 175 RRK 177 (268)
Q Consensus 175 ~~~ 177 (268)
.++
T Consensus 294 ~~~ 296 (433)
T 4hw6_A 294 KHC 296 (433)
T ss_dssp TTE
T ss_pred CCE
Confidence 874
No 56
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.46 E-value=1.2e-11 Score=118.24 Aligned_cols=196 Identities=13% Similarity=0.104 Sum_probs=128.4
Q ss_pred EEecCCCCCcceEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEEEEc------CCCCC------e--eEEEeecCCcce
Q 024436 27 QYQIEGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFART------SPNRN------H--ISVILSGDKTGR 91 (268)
Q Consensus 27 ~i~~~~~~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~~~~~~~~------~~~~~------~--~~~~~~~~~~g~ 91 (268)
.+++.++..+.++++++. +.+|+++...++|.|+..+|.....+... .-..+ + -..+.++...++
T Consensus 333 ~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~ 412 (628)
T 4a0p_A 333 ILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNV 412 (628)
T ss_dssp ECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCE
Confidence 445666778999999984 66777788899999999988642222111 00111 1 112345556778
Q ss_pred EEEEeCCCCeEEEee-cCCCCcceEEEccCCCEEEEEecCCc--EEEEEEccCCCCCceeEEEe-CCCCCCceEEcCC-C
Q 024436 92 LMKYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSC--RILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPR-G 166 (268)
Q Consensus 92 v~~~d~~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~--~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~d-G 166 (268)
|.+++.++...+.+. ..+..|++|+++|....||++|...+ +|++++++|.. +..+.. .-..|.||++|++ +
T Consensus 413 I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~---~~~l~~~~l~~P~gla~D~~~~ 489 (628)
T 4a0p_A 413 INVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTE---REVLFFSGLSKPIALALDSRLG 489 (628)
T ss_dssp EEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTT
T ss_pred EEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCC---cEEEEeccCCCccEEEEeCCCC
Confidence 888888733333443 57889999999996568999999876 89999999742 344433 2247999999986 5
Q ss_pred CEEEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEE
Q 024436 167 GFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEE 246 (268)
Q Consensus 167 ~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~ 246 (268)
+||+++...+. |. +++.+|....++... .+..+.+++.
T Consensus 490 ~LYw~D~~~~~-----I~----------------------------------~~~~dG~~r~~~~~~---~~~~P~glav 527 (628)
T 4a0p_A 490 KLFWADSDLRR-----IE----------------------------------SSDLSGANRIVLEDS---NILQPVGLTV 527 (628)
T ss_dssp EEEEEETTTTE-----EE----------------------------------EEETTSCSCEEEECS---SCSCEEEEEE
T ss_pred EEEEEeCCCCE-----EE----------------------------------EEeCCCCceEEEEcC---CCCCcEEEEE
Confidence 79999876542 33 333333333333321 1344556666
Q ss_pred eCCEEEEeeCCCCeEEEEeCC
Q 024436 247 KDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 247 ~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
.+++||++++..+.|.+++..
T Consensus 528 ~~~~ly~tD~~~~~i~~~~k~ 548 (628)
T 4a0p_A 528 FENWLYWIDKQQQMIEKIDMT 548 (628)
T ss_dssp ETTEEEEEETTTTEEEEEETT
T ss_pred ECCEEEEEECCCCeEEEEECc
Confidence 777888888888888777653
No 57
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.45 E-value=1.9e-10 Score=100.09 Aligned_cols=165 Identities=11% Similarity=0.082 Sum_probs=108.0
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEE-EeCCCeEEEEeCCCCeE-EEEEEc------------------CCCCCeeEEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYT-GVSDGRIIKWHQDQRRW-LHFART------------------SPNRNHISVI 83 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~-~~~~g~I~~~~~~g~~~-~~~~~~------------------~~~~~~~~~~ 83 (268)
.+..++.+. .|.+++++|||+.+|+ ...++.|..++.+.... ..+... ++++.++...
T Consensus 81 ~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 158 (353)
T 3vgz_A 81 VTQAIHNDL--KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYIS 158 (353)
T ss_dssp EEEEEEESS--CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEE
T ss_pred EEEEEecCC--CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEE
Confidence 455555554 6999999999995555 45579999999754322 222111 1222222211
Q ss_pred eecCCcceEEEEeCCCCeEEEeec-CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe----CCCCCC
Q 024436 84 LSGDKTGRLMKYDPATKQVTVLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ----LPGFPD 158 (268)
Q Consensus 84 ~~~~~~g~v~~~d~~~~~~~~~~~-~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~----l~g~Pd 158 (268)
.....+.|+.+|+++++...... ....|++++++|||++||+++. .++|++|+...++. ...+.. ....|.
T Consensus 159 -~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~ 234 (353)
T 3vgz_A 159 -GIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKI--LSRKKLLDDGKEHFFI 234 (353)
T ss_dssp -EESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEE--EEEEECCCSSSCCCEE
T ss_pred -ecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeE--EEEEEcCCCCCCcccc
Confidence 11346789999999888766665 4566999999999999999976 68999999875321 112211 123567
Q ss_pred ceEEcCCCC-EEEEEecCCCcceeeeEee-Cccceeeeecccc
Q 024436 159 NIKRSPRGG-FWVGIHSRRKGISKLVLSF-PWIGNVLIKLPID 199 (268)
Q Consensus 159 gia~d~dG~-l~va~~~~~~~~~~~v~~~-~~~g~~l~~i~~~ 199 (268)
+++++++|+ +|++....+ . |..+ ..+++.+..++.+
T Consensus 235 ~~~~s~dg~~l~~~~~~~~-~----v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 235 NISLDTARQRAFITDSKAA-E----VLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp EEEEETTTTEEEEEESSSS-E----EEEEETTTCCEEEEEECS
T ss_pred eEEECCCCCEEEEEeCCCC-E----EEEEECCCCcEEEEEEcC
Confidence 899999997 788876654 3 4444 3567777777654
No 58
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.42 E-value=4.8e-11 Score=104.40 Aligned_cols=140 Identities=18% Similarity=0.209 Sum_probs=89.1
Q ss_pred CCCcceEEECCCCCEEEEEe-CCCeEEEEeC--CCCe--EEEEE------------------EcCCCCCeeEEEeecCCc
Q 024436 33 AIGPESLAFDALGEGPYTGV-SDGRIIKWHQ--DQRR--WLHFA------------------RTSPNRNHISVILSGDKT 89 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~-~~g~I~~~~~--~g~~--~~~~~------------------~~~~~~~~~~~~~~~~~~ 89 (268)
...|.+++++|||+.+|+.. .++.|..++. +|.. +..+. ..++++. + +......
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l--~v~~~~~ 161 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-L--AVIDLGS 161 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-E--EEEETTT
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-E--EEEeCCC
Confidence 35799999999999887766 6788877764 3432 11111 1122222 1 2233445
Q ss_pred ceEEEEeCC-CCeEEEee----cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEE---EeCC------C
Q 024436 90 GRLMKYDPA-TKQVTVLL----GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIV---AQLP------G 155 (268)
Q Consensus 90 g~v~~~d~~-~~~~~~~~----~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~---~~l~------g 155 (268)
+.|+.++.+ ++++.... .....|++++|+|||++||+++...++|.+|+++... +..... ...+ .
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT-GAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT-TEEEEEEEEESSCTTCCSCC
T ss_pred CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC-CceEEeeeeeecCCCCCCCC
Confidence 566666654 46554321 2334789999999999999999999999999887411 222222 2222 2
Q ss_pred CCCceEEcCCCC-EEEEEecCC
Q 024436 156 FPDNIKRSPRGG-FWVGIHSRR 176 (268)
Q Consensus 156 ~Pdgia~d~dG~-l~va~~~~~ 176 (268)
.|.++++++||+ ||++....+
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYN 262 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTT
T ss_pred cceeEEECCCCCEEEEEeCCCC
Confidence 377799999997 778877654
No 59
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.42 E-value=1.3e-10 Score=103.10 Aligned_cols=216 Identities=10% Similarity=0.063 Sum_probs=130.5
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc----------------CCC---CCeeEEEe
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART----------------SPN---RNHISVIL 84 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~----------------~~~---~~~~~~~~ 84 (268)
.++++.-+ +..|+++++.|||++|++....|+|+++++++.....+... .|+ ..+++.+.
T Consensus 23 ~~~~va~g-L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 23 VLRTVATG-LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred eeEEeecC-CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 45555544 88999999999999777776689999998753322333221 111 01344333
Q ss_pred ecCCcceEEEEeCCCC--------eEEEee-----cCCCCcceEEEccCCCEEEEEec-------------CCcEEEEEE
Q 024436 85 SGDKTGRLMKYDPATK--------QVTVLL-----GNLSFPNGVALSEDGNYILLAET-------------TSCRILRYW 138 (268)
Q Consensus 85 ~~~~~g~v~~~d~~~~--------~~~~~~-----~~~~~pnGia~spdg~~lyva~~-------------~~~~I~~~~ 138 (268)
+....++|.|+..+.+ +.+.+. ...++++.|+|+|||. |||+.. ..++|+|++
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~ 180 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMT 180 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEEC
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEe
Confidence 4345678998876531 223332 2345677899999995 999953 357999999
Q ss_pred ccCCC-----CCceeEEEeCCCCCCceEEcCCCCEEEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCC
Q 024436 139 LKTSK-----AGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGN 213 (268)
Q Consensus 139 ~~~~~-----~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~ 213 (268)
.++.. ....+++..--..|.||++|++|+||+++++... .+.|.. +..+. .+-+ |.
T Consensus 181 ~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~--~deln~----------i~~G~-nyGw------P~ 241 (347)
T 3das_A 181 PDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDT--WDELNA----------IKPGD-NYGW------PE 241 (347)
T ss_dssp TTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSS--CEEEEE----------ECTTC-BCCT------TT
T ss_pred CCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCC--CceeeE----------EcCCC-EecC------Cc
Confidence 98641 1123455542235999999999999999987652 122222 21111 1000 00
Q ss_pred -cEEEEEECCCC--CEEEEEEcCCCCceeceEEEEEeCCEEEEeeCCCCeEEEEeCC
Q 024436 214 -GGMAMRISEQG--NVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 214 -~~~~~~~~~~G--~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
++. . +..+ .++..+. +. ..++++++..+|.+|++.+.+.+|.+++++
T Consensus 242 ~~g~--~-~~~~~~~P~~~~~-~~---~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~ 291 (347)
T 3das_A 242 AEGK--G-GGSGFHDPVAQWS-TD---EASPSGIAYAEGSVWMAGLRGERLWRIPLK 291 (347)
T ss_dssp CCSS--C-CCTTCCCCSEEEC-TT---TCCEEEEEEETTEEEEEESTTCSEEEEEEE
T ss_pred ccCC--C-CCccccCCcEecC-CC---CCCCcceEEEcCceeeccccCCEEEEEEec
Confidence 000 0 0011 1222222 11 135778888899999999999999998753
No 60
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.37 E-value=3.3e-09 Score=93.83 Aligned_cols=227 Identities=10% Similarity=0.107 Sum_probs=139.5
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEE-EEeCCCeEEEEeCCCCeEE-EEE--------EcCCCCCeeEEEeecCCcceEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPY-TGVSDGRIIKWHQDQRRWL-HFA--------RTSPNRNHISVILSGDKTGRLM 93 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~-~~~~~g~I~~~~~~g~~~~-~~~--------~~~~~~~~~~~~~~~~~~g~v~ 93 (268)
.+..+..+. .|.+++++|+|+.++ ++..++.|..++....... .+. ...+++.++. ......+.|+
T Consensus 24 ~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~--~~~~~~~~v~ 99 (391)
T 1l0q_A 24 VTATIPVGS--NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVY--VTNMASSTLS 99 (391)
T ss_dssp EEEEEECSS--SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEE--EEETTTTEEE
T ss_pred EEEEeecCC--CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEE--EEECCCCEEE
Confidence 455555553 699999999999764 5557899999997543222 221 1123333332 2344568999
Q ss_pred EEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-EEEEE
Q 024436 94 KYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGI 172 (268)
Q Consensus 94 ~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l~va~ 172 (268)
.+|.++++..........+++++|+|||+.||++....+.|+.|++..++ ..........|..++++++|+ +|++.
T Consensus 100 v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 100 VIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA---VINTVSVGRSPKGIAVTPDGTKVYVAN 176 (391)
T ss_dssp EEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEECCSSEEEEEECTTSSEEEEEE
T ss_pred EEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc---EEEEEecCCCcceEEECCCCCEEEEEe
Confidence 99999888766666666789999999999999999999999999987532 221222334688999999996 56776
Q ss_pred ecCCCcceeeeEee-CccceeeeeccccceeeeeeccccC----------CCcEEEEEECCC-CCEEEEEEcCCCCceec
Q 024436 173 HSRRKGISKLVLSF-PWIGNVLIKLPIDIVKIHSSLVKLS----------GNGGMAMRISEQ-GNVLEILEEIGRKMWRS 240 (268)
Q Consensus 173 ~~~~~~~~~~v~~~-~~~g~~l~~i~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-G~~~~~~~~~~g~~~~~ 240 (268)
...+ . |..+ ...++.+..++........++.+.. .. +.+..+|.. ++.+..+.... .
T Consensus 177 ~~~~-~----v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-~~v~~~d~~~~~~~~~~~~~~-----~ 245 (391)
T 1l0q_A 177 FDSM-S----ISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYF-NTVSMIDTGTNKITARIPVGP-----D 245 (391)
T ss_dssp TTTT-E----EEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSC-CEEEEEETTTTEEEEEEECCS-----S
T ss_pred CCCC-E----EEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCC-CcEEEEECCCCeEEEEEecCC-----C
Confidence 5554 2 3333 3445555544432211111111000 11 233444432 44444444321 1
Q ss_pred eEEEEE--eCCEEEEeeCCCCeEEEEeCCC
Q 024436 241 ISEVEE--KDGNLWIGSVNMPYAGLYNYSS 268 (268)
Q Consensus 241 ~s~~~~--~~g~Lyv~s~~~~~v~~~~~~~ 268 (268)
+..+.. .+.+||+++..++.|.++++++
T Consensus 246 ~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 246 PAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 334433 2457999999999999998763
No 61
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.37 E-value=3e-10 Score=98.75 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=93.7
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc----------CCCCCeeEEEeecCCc----ceEEEEeCC
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART----------SPNRNHISVILSGDKT----GRLMKYDPA 98 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~~~~----g~v~~~d~~ 98 (268)
...|++++++++|++++++..++.|.++++++..+..+... .+++.. ++..... +.|+++|++
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l---~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRL---FVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCE---EEEECTTSSSCCEEEEECTT
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcE---EEEeCCCCCCCceEEEEeCC
Confidence 46799999999999888888889999999876544433211 112211 1121222 589999998
Q ss_pred CCeEEEee---cCCCCcceEEEccCCCEEEEEecC------CcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-E
Q 024436 99 TKQVTVLL---GNLSFPNGVALSEDGNYILLAETT------SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-F 168 (268)
Q Consensus 99 ~~~~~~~~---~~~~~pnGia~spdg~~lyva~~~------~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l 168 (268)
+++.+.+. .....|++|+++|||+ +|+++.. ...|++++.+++. ...+......|.+++++++|+ +
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRT---VTPIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCC---EEEEEEEESSEEEEEECTTSSEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCE---EEEeecCCCcccceEECCCCCEE
Confidence 77766333 2345789999999996 8888764 4789999876532 233322113589999999997 8
Q ss_pred EEEEecCC
Q 024436 169 WVGIHSRR 176 (268)
Q Consensus 169 ~va~~~~~ 176 (268)
|++....+
T Consensus 197 ~v~~~~~~ 204 (333)
T 2dg1_A 197 WVTETTAN 204 (333)
T ss_dssp EEEEGGGT
T ss_pred EEEeCCCC
Confidence 99886554
No 62
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.35 E-value=1.3e-09 Score=96.49 Aligned_cols=142 Identities=11% Similarity=0.149 Sum_probs=89.7
Q ss_pred cCCCCCcceEEECCCCCEEEEEeCCCeEEEEeC--CCCeEEEEEEc----------CCCCCeeEEEee------------
Q 024436 30 IEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQ--DQRRWLHFART----------SPNRNHISVILS------------ 85 (268)
Q Consensus 30 ~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~--~g~~~~~~~~~----------~~~~~~~~~~~~------------ 85 (268)
.++...|.+++++|||+.+|+...+ .|..++. +|+........ ++++.++..+..
T Consensus 36 ~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 36 IPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp CCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred cCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 3445579999999999988877665 7777764 45432111111 122332222111
Q ss_pred --cCCcceEEEEeCCCCeEEEee-----cCCCCcceEEEccCCCEEEEEecCCcEEEEEEcc-CCCCCceeEEE--eC--
Q 024436 86 --GDKTGRLMKYDPATKQVTVLL-----GNLSFPNGVALSEDGNYILLAETTSCRILRYWLK-TSKAGTIEIVA--QL-- 153 (268)
Q Consensus 86 --~~~~g~v~~~d~~~~~~~~~~-----~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~-~~~~g~~~~~~--~l-- 153 (268)
......+|.++.+ +++.... .....|++++|+|||++||+++...++|++|+++ +++ ..... ..
T Consensus 115 ~~~~g~v~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~---~~~~~~~~~~~ 190 (365)
T 1jof_A 115 YKFAGYGNVFSVSET-GKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE---VELVGSVDAPD 190 (365)
T ss_dssp SSSCCEEEEEEECTT-CCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC---EEEEEEEECSS
T ss_pred ecCCceEEEEccCCC-CcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC---EEEeeeEecCC
Confidence 2233455666554 5443222 2456899999999999999999888999999997 432 22221 22
Q ss_pred -CCCCCceEEcCCCC-EEEEEecCC
Q 024436 154 -PGFPDNIKRSPRGG-FWVGIHSRR 176 (268)
Q Consensus 154 -~g~Pdgia~d~dG~-l~va~~~~~ 176 (268)
...|.++++++||+ +|++....+
T Consensus 191 ~g~~p~~~~~spdg~~l~v~~~~~~ 215 (365)
T 1jof_A 191 PGDHPRWVAMHPTGNYLYALMEAGN 215 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTT
T ss_pred CCCCCCEeEECCCCCEEEEEECCCC
Confidence 23699999999996 677765444
No 63
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.35 E-value=2e-09 Score=101.04 Aligned_cols=232 Identities=9% Similarity=-0.008 Sum_probs=142.3
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeC--C-CCeEEEEE--------EcCC----CCCeeEEEeecCC
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQ--D-QRRWLHFA--------RTSP----NRNHISVILSGDK 88 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~--~-g~~~~~~~--------~~~~----~~~~~~~~~~~~~ 88 (268)
.+.+++.+. .|++++++|||+.+|+...++.|..|+. . ++....+. ..++ ++.++.... ..
T Consensus 171 ~~~~i~~g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~--~~ 246 (543)
T 1nir_A 171 IVKVIDTGY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGA--YW 246 (543)
T ss_dssp EEEEEECST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEE--EE
T ss_pred EEEEEecCc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEE--cc
Confidence 566666664 4999999999999999998999999998 3 22222111 1245 555543322 23
Q ss_pred cceEEEEeCCCCeEEEeecC------------CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCC
Q 024436 89 TGRLMKYDPATKQVTVLLGN------------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGF 156 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~~~------------~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~ 156 (268)
.+.|..+|.++++....... -..+.+|+++||++.+|++....++|+.++......-....+ .....
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~ 325 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPF 325 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSS
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcC
Confidence 46788889887766443321 125678999999999999999999999999875332111122 23347
Q ss_pred CCceEEcCCCC-EEEEEecCCCcceeeeEe-eCccceeeeeccccceee----eeec----------cccCCCcEEEEEE
Q 024436 157 PDNIKRSPRGG-FWVGIHSRRKGISKLVLS-FPWIGNVLIKLPIDIVKI----HSSL----------VKLSGNGGMAMRI 220 (268)
Q Consensus 157 Pdgia~d~dG~-l~va~~~~~~~~~~~v~~-~~~~g~~l~~i~~~~~~~----~~~~----------~~~~~~~~~~~~~ 220 (268)
|.+++++++|+ +|++....+. |.. ...+++++..++.+..+. ..+. +........++-.
T Consensus 326 ~~~~~~spdg~~l~va~~~~~~-----v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 326 LHDGGWDSSHRYFMTAANNSNK-----VAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp CCCEEECTTSCEEEEEEGGGTE-----EEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEEC
T ss_pred ccCceECCCCCEEEEEecCCCe-----EEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEe
Confidence 99999999998 6777765553 333 356788887776532110 0111 0001111222223
Q ss_pred CCC------CCEEEEEEcCCCCceeceEEEE-EeCCEEEEeeCC------CCeEEEEeCCC
Q 024436 221 SEQ------GNVLEILEEIGRKMWRSISEVE-EKDGNLWIGSVN------MPYAGLYNYSS 268 (268)
Q Consensus 221 ~~~------G~~~~~~~~~~g~~~~~~s~~~-~~~g~Lyv~s~~------~~~v~~~~~~~ 268 (268)
++. ++++..+..+.+.. ..... +.+.+||+++.. ++.|.++|+++
T Consensus 401 ~~~~~~~~~~~~v~~l~~~g~~~---~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 401 DPKNHPQYAWKKVAELQGQGGGS---LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp CTTTCTTTBTSEEEEEECSCSCC---CCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred CCCCCchhcCeEEEEEEcCCCCc---eEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC
Confidence 321 56666666543221 11222 345789999853 44999999864
No 64
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.34 E-value=3.2e-10 Score=99.11 Aligned_cols=141 Identities=15% Similarity=0.133 Sum_probs=86.3
Q ss_pred CCCcceEEECCCCCEEEEEeC--CCeEEEEeCCCCeEEEEEE---c---------CCCCCeeEEEeecCCcceEEEEeCC
Q 024436 33 AIGPESLAFDALGEGPYTGVS--DGRIIKWHQDQRRWLHFAR---T---------SPNRNHISVILSGDKTGRLMKYDPA 98 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~--~g~I~~~~~~g~~~~~~~~---~---------~~~~~~~~~~~~~~~~g~v~~~d~~ 98 (268)
...|.+++++|||++++++.. ++.|..++.++........ . ++++.++.. .....+.+..++.+
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~--~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYS--ANYHKGTAEVMKIA 116 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEE--EETTTTEEEEEEEC
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEE--EeCCCCEEEEEEeC
Confidence 458999999999995445442 6889888875433222211 1 233333332 22234555555442
Q ss_pred -CCeEEEee---c---------CCCCcceEEEccCCCEEEEEecCCcEEEEEEcc-CCCCCceeEEEeCC-CCCCceEEc
Q 024436 99 -TKQVTVLL---G---------NLSFPNGVALSEDGNYILLAETTSCRILRYWLK-TSKAGTIEIVAQLP-GFPDNIKRS 163 (268)
Q Consensus 99 -~~~~~~~~---~---------~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~-~~~~g~~~~~~~l~-g~Pdgia~d 163 (268)
+++.+.+. . ....|++++++|||+ +|+++...++|++|+++ ++.+.....+...+ ..|.+++++
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s 195 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS 195 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC
Confidence 24444332 1 123477899999999 99999999999999997 32221111111112 268899999
Q ss_pred CCCC-EEEEEecCC
Q 024436 164 PRGG-FWVGIHSRR 176 (268)
Q Consensus 164 ~dG~-l~va~~~~~ 176 (268)
+||+ +|++....+
T Consensus 196 pdg~~l~v~~~~~~ 209 (347)
T 3hfq_A 196 PDGQYAFLAGELSS 209 (347)
T ss_dssp TTSSEEEEEETTTT
T ss_pred CCCCEEEEEeCCCC
Confidence 9998 788776654
No 65
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.32 E-value=5e-10 Score=109.50 Aligned_cols=90 Identities=12% Similarity=0.051 Sum_probs=67.1
Q ss_pred EeecCCcceEEEEeCCCC----eEEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe-CCCC
Q 024436 83 ILSGDKTGRLMKYDPATK----QVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGF 156 (268)
Q Consensus 83 ~~~~~~~g~v~~~d~~~~----~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~-l~g~ 156 (268)
++.+...++|++++.++. ..+.+. .++..|+|||+++.++.||++|+..++|.+++++|.. .+++.. .-..
T Consensus 439 Y~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~---~~~l~~~~l~~ 515 (791)
T 3m0c_C 439 YWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFRENGSK 515 (791)
T ss_dssp EEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS---EEEEEECTTCC
T ss_pred EEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe---EEEEEeCCCCC
Confidence 345556678888888732 233344 4889999999999998999999999999999998742 444443 2236
Q ss_pred CCceEEcCC-CCEEEEEecC
Q 024436 157 PDNIKRSPR-GGFWVGIHSR 175 (268)
Q Consensus 157 Pdgia~d~d-G~l~va~~~~ 175 (268)
|.||++|+. |+||+++++.
T Consensus 516 P~gIaVDp~~g~LYwtD~g~ 535 (791)
T 3m0c_C 516 PRAIVVDPVHGFMYWTDWGT 535 (791)
T ss_dssp EEEEEEETTTTEEEEEECSS
T ss_pred cceEEEecCCCCEEEecCCC
Confidence 999999986 7899999876
No 66
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.28 E-value=1.8e-09 Score=93.44 Aligned_cols=154 Identities=12% Similarity=0.068 Sum_probs=99.7
Q ss_pred cceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC-----------CCCCeeEEEeecCCcceEEEEeCCCCeEEE
Q 024436 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTS-----------PNRNHISVILSGDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 104 (268)
+.|+++.++++++++...+++|..++.+........... +++.++ +......+.|+.+|.++++...
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~--~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTA--YVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp --CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEE--EEEETTTTEEEEEETTTTEEEE
T ss_pred CccccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEE--EEEeCCCCcEEEEeCCCCcEEE
Confidence 457788999998888889999999998654332222211 122222 2233566899999998887654
Q ss_pred eecC-------CCCcceEEEccCCCEEEEEecC-----------CcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCC
Q 024436 105 LLGN-------LSFPNGVALSEDGNYILLAETT-----------SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRG 166 (268)
Q Consensus 105 ~~~~-------~~~pnGia~spdg~~lyva~~~-----------~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG 166 (268)
.... ...|++++++|||++||++... .++|++|+++++...........+..+.++++++||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 4332 2338999999999999999854 579999998753222111122234468889999999
Q ss_pred CEEEEEecCCCcceeeeEee-Cccceeeeecccc
Q 024436 167 GFWVGIHSRRKGISKLVLSF-PWIGNVLIKLPID 199 (268)
Q Consensus 167 ~l~va~~~~~~~~~~~v~~~-~~~g~~l~~i~~~ 199 (268)
++|++ .. . |..+ ..+++.+..++..
T Consensus 160 ~l~~~--~~--~----i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 160 SLYVA--GP--D----IYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp CEEEE--SS--S----EEEECTTTCCEEEEECST
T ss_pred cEEEc--cC--c----EEEEeCCCCceecccccc
Confidence 98874 22 2 3333 3567776666543
No 67
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.28 E-value=5.5e-10 Score=95.84 Aligned_cols=141 Identities=15% Similarity=0.175 Sum_probs=93.9
Q ss_pred EEEEecCCCCCcceEEECCCCCEEEE-------EeCCCeEEEEeCCCCeEEEEEE-----c---------CCC-CCeeEE
Q 024436 25 VVQYQIEGAIGPESLAFDALGEGPYT-------GVSDGRIIKWHQDQRRWLHFAR-----T---------SPN-RNHISV 82 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~dG~~l~~-------~~~~g~I~~~~~~g~~~~~~~~-----~---------~~~-~~~~~~ 82 (268)
.+.+ ..++..|++++++++|+++++ +..+++|.+++++...+..+.. . .++ +. .
T Consensus 10 ~~~~-~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~---l 85 (314)
T 1pjx_A 10 FTKV-TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ---L 85 (314)
T ss_dssp CEEE-ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE---E
T ss_pred Hhhh-hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc---E
Confidence 3444 344789999999999998877 5678999999964332333321 0 111 11 1
Q ss_pred EeecCCcceEEEEeCCCCeEEEe-ec-----CCCCcceEEEccCCCEEEEEecCC---------------cEEEEEEccC
Q 024436 83 ILSGDKTGRLMKYDPATKQVTVL-LG-----NLSFPNGVALSEDGNYILLAETTS---------------CRILRYWLKT 141 (268)
Q Consensus 83 ~~~~~~~g~v~~~d~~~~~~~~~-~~-----~~~~pnGia~spdg~~lyva~~~~---------------~~I~~~~~~~ 141 (268)
++... ...|+++|++ ++.+.+ .. ....|++|++++||+ +|+++... +.|++++.++
T Consensus 86 ~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 162 (314)
T 1pjx_A 86 FVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG 162 (314)
T ss_dssp EEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS
T ss_pred EEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCCC
Confidence 11211 2378899998 877665 32 234689999999996 89998764 6899998763
Q ss_pred CCCCceeEEEeCCCCCCceEEc----CCC-CEEEEEecCC
Q 024436 142 SKAGTIEIVAQLPGFPDNIKRS----PRG-GFWVGIHSRR 176 (268)
Q Consensus 142 ~~~g~~~~~~~l~g~Pdgia~d----~dG-~l~va~~~~~ 176 (268)
....+......|.+++++ ++| .+|++....+
T Consensus 163 ----~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~ 198 (314)
T 1pjx_A 163 ----QMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTK 198 (314)
T ss_dssp ----CEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTT
T ss_pred ----CEEEeccCCCCcceEEEecccCCCCCEEEEEECCCC
Confidence 233332212368999999 999 5899987655
No 68
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.27 E-value=6.9e-10 Score=95.96 Aligned_cols=141 Identities=17% Similarity=0.278 Sum_probs=99.6
Q ss_pred CCEEEEecCCCCCcceEEECCCCC-EEEEEeCCCeEEEEeCCCCeEEEEEEcC---------CCCCeeEEEeecCCcceE
Q 024436 23 QGVVQYQIEGAIGPESLAFDALGE-GPYTGVSDGRIIKWHQDQRRWLHFARTS---------PNRNHISVILSGDKTGRL 92 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~~~dG~-~l~~~~~~g~I~~~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~g~v 92 (268)
..++.+.-+ ...+||++++++|+ +++++..+++|++++++|+ ...+.... +++. .+......++|
T Consensus 35 ~~~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~dG~---l~v~~~~~~~v 109 (305)
T 3dr2_A 35 ARLLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDAQQR---LVHCEHGRRAI 109 (305)
T ss_dssp CCCEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECTTSC---EEEEETTTTEE
T ss_pred CceEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECCCCC---EEEEECCCCEE
Confidence 467777766 56799999999998 7788888999999999876 34433221 1111 11222345689
Q ss_pred EEEeCCCCeEEEeec-----CCCCcceEEEccCCCEEEEEec-----------------CCcEEEEEEccCCCCCceeEE
Q 024436 93 MKYDPATKQVTVLLG-----NLSFPNGVALSEDGNYILLAET-----------------TSCRILRYWLKTSKAGTIEIV 150 (268)
Q Consensus 93 ~~~d~~~~~~~~~~~-----~~~~pnGia~spdg~~lyva~~-----------------~~~~I~~~~~~~~~~g~~~~~ 150 (268)
++++++ ++.+.+.. .+..||+++++|||+ +|++|. ..+.|++++.++++. ..+
T Consensus 110 ~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~---~~~ 184 (305)
T 3dr2_A 110 TRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL---QRM 184 (305)
T ss_dssp EEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC---EEE
T ss_pred EEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE---EEE
Confidence 999987 77766643 245799999999996 999863 146899998864332 222
Q ss_pred EeCCCCCCceEEcCCCC-EEEEEec
Q 024436 151 AQLPGFPDNIKRSPRGG-FWVGIHS 174 (268)
Q Consensus 151 ~~l~g~Pdgia~d~dG~-l~va~~~ 174 (268)
..+ ..|.|+++++||+ ||++...
T Consensus 185 ~~~-~~p~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 185 ADL-DHPNGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp EEE-SSEEEEEECTTSSEEEEEECC
T ss_pred ecC-CCCcceEEcCCCCEEEEEecC
Confidence 233 3699999999997 8998875
No 69
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.25 E-value=2.5e-10 Score=101.60 Aligned_cols=122 Identities=20% Similarity=0.154 Sum_probs=82.6
Q ss_pred CEEEEecCCCCCcceEEECCCCC-EEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCeeEEEeecCCcceEEEEeCCCCeE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGE-GPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNHISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~-~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
.++++.-+ +..|.+++++|||+ +|++.. .|+|++++++|.....+ ...+
T Consensus 9 ~~~~va~~-l~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~g~~~~~~--------------~~~~-------------- 58 (353)
T 2g8s_A 9 NVEVLQDK-LDHPWALAFLPDNHGMLITLR-GGELRHWQAGKGLSAPL--------------SGVP-------------- 58 (353)
T ss_dssp EEEEEEEE-ESSEEEEEECSTTCCEEEEET-TTEEEEEETTTEECCCC--------------BSCC--------------
T ss_pred EEEEEECC-CCCcEEEEEcCCCCEEEEEeC-CceEEEEeCCCceeeEe--------------cCCc--------------
Confidence 55666653 77899999999999 777764 69999998776420000 0000
Q ss_pred EEeecCCCCcceEEEccC---CCEEEEEecC-------CcEEEEEEccCC--CCCceeEEE-eCC------CCCCceEEc
Q 024436 103 TVLLGNLSFPNGVALSED---GNYILLAETT-------SCRILRYWLKTS--KAGTIEIVA-QLP------GFPDNIKRS 163 (268)
Q Consensus 103 ~~~~~~~~~pnGia~spd---g~~lyva~~~-------~~~I~~~~~~~~--~~g~~~~~~-~l~------g~Pdgia~d 163 (268)
+....+...++||+++|| +++|||+++. ..+|.+|++++. .+...+++. .+| ..|.+|+++
T Consensus 59 ~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~ 138 (353)
T 2g8s_A 59 DVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFD 138 (353)
T ss_dssp CCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEEC
T ss_pred ccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEEC
Confidence 112233456799999997 6689999875 468999998742 233334433 343 137899999
Q ss_pred CCCCEEEEEecC
Q 024436 164 PRGGFWVGIHSR 175 (268)
Q Consensus 164 ~dG~l~va~~~~ 175 (268)
+||+||++....
T Consensus 139 pdG~Lyv~~Gd~ 150 (353)
T 2g8s_A 139 GKGYLFIALGEN 150 (353)
T ss_dssp SSSEEEEEECCT
T ss_pred CCCcEEEEECCC
Confidence 999999998653
No 70
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.24 E-value=9.5e-09 Score=88.54 Aligned_cols=148 Identities=11% Similarity=0.060 Sum_probs=93.4
Q ss_pred EEEEecCCCCCcceEEECCCCCEEEEEeCC-CeEEEEeCC--CCeEEEEEE-----------cCCCCCeeEEEeecCCcc
Q 024436 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSD-GRIIKWHQD--QRRWLHFAR-----------TSPNRNHISVILSGDKTG 90 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~dG~~l~~~~~~-g~I~~~~~~--g~~~~~~~~-----------~~~~~~~~~~~~~~~~~g 90 (268)
+..+..+ ..|.+++++|+|+.+++...+ +.|..++.+ +..+..... .++++.++. ......+
T Consensus 31 ~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~--~~~~~~~ 106 (343)
T 1ri6_A 31 TQVVDVP--GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVF--VGSYNAG 106 (343)
T ss_dssp EEEEECS--SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEE--EEETTTT
T ss_pred eeeEecC--CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEE--EEecCCC
Confidence 3444443 379999999999977776665 888887654 322222211 122233332 2333456
Q ss_pred eEEEEeCCCC---eEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC-CCCCcee--EEEe-CCCCCCceEEc
Q 024436 91 RLMKYDPATK---QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT-SKAGTIE--IVAQ-LPGFPDNIKRS 163 (268)
Q Consensus 91 ~v~~~d~~~~---~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~-~~~g~~~--~~~~-l~g~Pdgia~d 163 (268)
.|..+|.+++ +..........|++++|+|||++||+++...++|++|+++. +...... .+.. ....|.+++++
T Consensus 107 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (343)
T 1ri6_A 107 NVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFH 186 (343)
T ss_dssp EEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEEC
T ss_pred eEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEEC
Confidence 6777766222 33334455667999999999999999998889999999974 3221111 1111 12368899999
Q ss_pred CCCC-EEEEEecCC
Q 024436 164 PRGG-FWVGIHSRR 176 (268)
Q Consensus 164 ~dG~-l~va~~~~~ 176 (268)
++|+ +|++....+
T Consensus 187 pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 187 PNEQYAYCVNELNS 200 (343)
T ss_dssp TTSSEEEEEETTTT
T ss_pred CCCCEEEEEeCCCC
Confidence 9998 777765544
No 71
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.23 E-value=1e-08 Score=88.58 Aligned_cols=148 Identities=18% Similarity=0.168 Sum_probs=95.3
Q ss_pred EEEEecCCCCCcce-EEECCCCCEEEEEeCC-C--eEEEEeCCCCeEEEEE---------EcCCCCCeeEEEeecCCc-c
Q 024436 25 VVQYQIEGAIGPES-LAFDALGEGPYTGVSD-G--RIIKWHQDQRRWLHFA---------RTSPNRNHISVILSGDKT-G 90 (268)
Q Consensus 25 ~~~i~~~~~~~P~g-ia~~~dG~~l~~~~~~-g--~I~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~-g 90 (268)
...+..+. .|.. ++++|||+.+++...+ + .|..++.+........ ..++++.++......... -
T Consensus 76 ~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 76 VVAIQEGQ--SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp EEEEEECS--SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred EEecccCC--CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceE
Confidence 44444443 6888 9999999988865555 3 8999998654322221 123444444333232233 4
Q ss_pred eEEEEeCCCCeE----EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCc-eeEEEeCCCCCCceEEcCC
Q 024436 91 RLMKYDPATKQV----TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT-IEIVAQLPGFPDNIKRSPR 165 (268)
Q Consensus 91 ~v~~~d~~~~~~----~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~-~~~~~~l~g~Pdgia~d~d 165 (268)
.+|.++.+ +.+ .........|++++|+|||++||+++...++|.+|+++.+.... ...+ .....|.++++++|
T Consensus 154 ~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~~~~spd 231 (331)
T 3u4y_A 154 RRFKIDAD-GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAV-GTNNLPGTIVVSRD 231 (331)
T ss_dssp EEEEECTT-CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEE-ECSSCCCCEEECTT
T ss_pred EEEEECCC-CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeec-cCCCCCceEEECCC
Confidence 56666654 433 22234456799999999999999999999999999997543211 1222 23457999999999
Q ss_pred CC-EEEEEecCC
Q 024436 166 GG-FWVGIHSRR 176 (268)
Q Consensus 166 G~-l~va~~~~~ 176 (268)
|+ +|++....+
T Consensus 232 g~~l~v~~~~~~ 243 (331)
T 3u4y_A 232 GSTVYVLTESTV 243 (331)
T ss_dssp SSEEEEECSSEE
T ss_pred CCEEEEEEcCCC
Confidence 98 777765443
No 72
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.22 E-value=6.6e-09 Score=89.12 Aligned_cols=157 Identities=13% Similarity=0.107 Sum_probs=102.1
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc----------CCCCCeeEEEeecCC-cceE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART----------SPNRNHISVILSGDK-TGRL 92 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~~~-~g~v 92 (268)
-+..++.+....+++++++|+|++++ ..+++|..++++|+.+-.+... .++++++ +.... ++++
T Consensus 27 ~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~l---v~~~~~~~~v 101 (276)
T 3no2_A 27 IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNAL---VAWCGHPSTI 101 (276)
T ss_dssp EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEE---EEEESTTEEE
T ss_pred EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEE---EEecCCCCEE
Confidence 34444544324699999999999777 3578899999988743333211 1222222 12223 6899
Q ss_pred EEEeCCCCeE-EEee--c----CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eCCCCCCceEEcC
Q 024436 93 MKYDPATKQV-TVLL--G----NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPGFPDNIKRSP 164 (268)
Q Consensus 93 ~~~d~~~~~~-~~~~--~----~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l~g~Pdgia~d~ 164 (268)
+.+|++ |+. .... . ....|+++++++||+ +++++..+++|..|+.+|. ..+. ..++.|.++.+.+
T Consensus 102 ~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~G~-----~~w~~~~~~~~~~~~~~~ 174 (276)
T 3no2_A 102 LEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREIAPNGQ-----LLNSVKLSGTPFSSAFLD 174 (276)
T ss_dssp EEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEEEECTTSC-----EEEEEECSSCCCEEEECT
T ss_pred EEEeCC-CCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEEEECCCCC-----EEEEEECCCCccceeEcC
Confidence 999997 543 3321 1 123578899999997 6678889999999998742 2221 2445789999999
Q ss_pred CCCEEEEEecCCCcceeeeEeeCcc-ceeeeecc
Q 024436 165 RGGFWVGIHSRRKGISKLVLSFPWI-GNVLIKLP 197 (268)
Q Consensus 165 dG~l~va~~~~~~~~~~~v~~~~~~-g~~l~~i~ 197 (268)
+|+++++...+++ |..+.+. |+++.++.
T Consensus 175 ~g~~~v~~~~~~~-----v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 175 NGDCLVACGDAHC-----FVQLNLESNRIVRRVN 203 (276)
T ss_dssp TSCEEEECBTTSE-----EEEECTTTCCEEEEEE
T ss_pred CCCEEEEeCCCCe-----EEEEeCcCCcEEEEec
Confidence 9999998876652 4444433 66655553
No 73
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.22 E-value=6.7e-09 Score=91.22 Aligned_cols=137 Identities=17% Similarity=0.200 Sum_probs=83.9
Q ss_pred CCcceEEECCCCCEEEEEe-CCCeEEEEeCC--CCe--E-EEE-------------------EEcCCCCCeeEEEeecCC
Q 024436 34 IGPESLAFDALGEGPYTGV-SDGRIIKWHQD--QRR--W-LHF-------------------ARTSPNRNHISVILSGDK 88 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~-~~g~I~~~~~~--g~~--~-~~~-------------------~~~~~~~~~~~~~~~~~~ 88 (268)
..|.++++ +|+.+++.. .++.|..++.+ +.. . ... ...++++.++.. ....
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~--~~~~ 175 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA--DDLG 175 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE--EETT
T ss_pred CCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE--EeCC
Confidence 47899998 788777655 57888887653 321 0 000 122334443332 2333
Q ss_pred cce--EEEEeCCCC----e-E-------EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC
Q 024436 89 TGR--LMKYDPATK----Q-V-------TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP 154 (268)
Q Consensus 89 ~g~--v~~~d~~~~----~-~-------~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~ 154 (268)
.+. +|.++..++ + + .........|++++|+|||++||+++...++|.+|+++++.+.....+...+
T Consensus 176 ~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~ 255 (361)
T 3scy_A 176 TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADT 255 (361)
T ss_dssp TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCS
T ss_pred CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCC
Confidence 444 455565543 2 2 2223445678999999999999999988899999999753221112222222
Q ss_pred ---CCCCceEEcCCCC-EEEEEec
Q 024436 155 ---GFPDNIKRSPRGG-FWVGIHS 174 (268)
Q Consensus 155 ---g~Pdgia~d~dG~-l~va~~~ 174 (268)
..|.++++++||+ ||++...
T Consensus 256 ~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 256 VNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp SCCCCEEEEEECTTSSEEEEEECS
T ss_pred CCCCCcccEEECCCCCEEEEECCC
Confidence 2367999999998 6777766
No 74
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.22 E-value=7.1e-09 Score=90.67 Aligned_cols=214 Identities=16% Similarity=0.113 Sum_probs=128.3
Q ss_pred EEEEecCCCCCcceEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEEEEc--------CCCCCeeEEEeecCCcceEEEE
Q 024436 25 VVQYQIEGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFART--------SPNRNHISVILSGDKTGRLMKY 95 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~g~v~~~ 95 (268)
++.+.-....-+||++++|+ +.+++++..+++|+++++++.....+... .+++.+ ++.. ...|+++
T Consensus 40 ~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l---~v~~--~~gl~~~ 114 (326)
T 2ghs_A 40 GRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQ---LIAS--DDGLFLR 114 (326)
T ss_dssp CEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEE---EEEE--TTEEEEE
T ss_pred eEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeE---EEEE--CCCEEEE
Confidence 55555545567999999997 66777787889999999877543333210 111111 1111 2359999
Q ss_pred eCCCCeEEEeecC-----CCCcceEEEccCCCEEEEEecC------CcEEEEEEccCCCCCceeEEEeCCCCCCceEEcC
Q 024436 96 DPATKQVTVLLGN-----LSFPNGVALSEDGNYILLAETT------SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP 164 (268)
Q Consensus 96 d~~~~~~~~~~~~-----~~~pnGia~spdg~~lyva~~~------~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~ 164 (268)
|+++++++.+... ...+|+++++|||+ +|+++.. .+.|++++ ++ ....+......|.++++++
T Consensus 115 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~-~g----~~~~~~~~~~~~~~i~~s~ 188 (326)
T 2ghs_A 115 DTATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA-KG----KVTKLFADISIPNSICFSP 188 (326)
T ss_dssp ETTTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE-TT----EEEEEEEEESSEEEEEECT
T ss_pred ECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe-CC----cEEEeeCCCcccCCeEEcC
Confidence 9988887766432 23589999999997 8888753 46899998 43 2333322113689999999
Q ss_pred CCC-EEEEEecCCCcceeeeEeeCc---cc-e-----eeeeccccceeeee-ec-------cccCCCcEEEEEECCCCCE
Q 024436 165 RGG-FWVGIHSRRKGISKLVLSFPW---IG-N-----VLIKLPIDIVKIHS-SL-------VKLSGNGGMAMRISEQGNV 226 (268)
Q Consensus 165 dG~-l~va~~~~~~~~~~~v~~~~~---~g-~-----~l~~i~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~G~~ 226 (268)
||+ +|++....+ . |.+++. +| + .+..+......+.. ++ -..... +.+.+++++|+.
T Consensus 189 dg~~lyv~~~~~~-~----I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~-~~v~~~d~~g~~ 262 (326)
T 2ghs_A 189 DGTTGYFVDTKVN-R----LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE-GAVDRYDTDGNH 262 (326)
T ss_dssp TSCEEEEEETTTC-E----EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT-TEEEEECTTCCE
T ss_pred CCCEEEEEECCCC-E----EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC-CEEEEECCCCCE
Confidence 996 888876554 3 444432 34 2 22222110000110 11 011111 347788888888
Q ss_pred EEEEEcCCCCceeceEEEEEe---CCEEEEeeCCCC
Q 024436 227 LEILEEIGRKMWRSISEVEEK---DGNLWIGSVNMP 259 (268)
Q Consensus 227 ~~~~~~~~g~~~~~~s~~~~~---~g~Lyv~s~~~~ 259 (268)
+..+..+. ..++.+... +++||+++....
T Consensus 263 ~~~i~~~~----~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 263 IARYEVPG----KQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp EEEEECSC----SBEEEEEEESTTSCEEEEEEBCTT
T ss_pred EEEEECCC----CCcEEEEEecCCCCEEEEEecCCC
Confidence 87776543 234555543 368999987764
No 75
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.20 E-value=7.3e-10 Score=102.53 Aligned_cols=154 Identities=14% Similarity=0.023 Sum_probs=101.7
Q ss_pred CCCcceEEE-------CCCCCEE-EEEeCC------CeEEEEeCC--CCeE-----EEEEE-cCCC-------CCeeEEE
Q 024436 33 AIGPESLAF-------DALGEGP-YTGVSD------GRIIKWHQD--QRRW-----LHFAR-TSPN-------RNHISVI 83 (268)
Q Consensus 33 ~~~P~gia~-------~~dG~~l-~~~~~~------g~I~~~~~~--g~~~-----~~~~~-~~~~-------~~~~~~~ 83 (268)
+..|.+|++ +++|+.+ +++..+ ..|+.++.+ |... ..++. ..+. ..++ +
T Consensus 185 ~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~L--Y 262 (496)
T 3kya_A 185 TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGEL--Y 262 (496)
T ss_dssp CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCE--E
T ss_pred cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeE--E
Confidence 456999999 9999944 444444 247777543 3321 12221 1111 1122 3
Q ss_pred eecCCcceEEEEeCC-------CCeE------------EEe--ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCC
Q 024436 84 LSGDKTGRLMKYDPA-------TKQV------------TVL--LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 142 (268)
Q Consensus 84 ~~~~~~g~v~~~d~~-------~~~~------------~~~--~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~ 142 (268)
+.....++|+++|++ ++++ +.+ ......|.+|+++|+|+.|||+|+.+++|++++.++.
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~ 342 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEI 342 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCC
Confidence 345677899999987 5654 122 2234678999999999999999999999999988753
Q ss_pred C--CCceeEEEeC---C------------CCCC-ceEEc-------CCCCEEEEEecCCCcceeeeEeeCccceee
Q 024436 143 K--AGTIEIVAQL---P------------GFPD-NIKRS-------PRGGFWVGIHSRRKGISKLVLSFPWIGNVL 193 (268)
Q Consensus 143 ~--~g~~~~~~~l---~------------g~Pd-gia~d-------~dG~l~va~~~~~~~~~~~v~~~~~~g~~l 193 (268)
. +.....++.. . ..|. |+++| ++|+||||++.+++ |+++.++|.+.
T Consensus 343 ~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~r-----Ir~i~~~G~v~ 413 (496)
T 3kya_A 343 KKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFC-----VRKVTPEGIVS 413 (496)
T ss_dssp TTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTE-----EEEECTTCBEE
T ss_pred cceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCE-----EEEEeCCCCEE
Confidence 1 1112334321 1 2588 88998 78999999999985 88888888653
No 76
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.17 E-value=1.4e-09 Score=100.12 Aligned_cols=125 Identities=15% Similarity=0.092 Sum_probs=83.4
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEEEcCCCCCeeEEEeecCCcceEEEEeCCCCeE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFARTSPNRNHISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
.++++.-+ +..|.+++++|||++|++....++|++++++ |. ...+.. +. + .
T Consensus 18 ~~~~~a~~-l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~-~~~~~~----------------------~~-~-~-- 69 (454)
T 1cru_A 18 DKKVILSN-LNKPHALLWGPDNQIWLTERATGKILRVNPESGS-VKTVFQ----------------------VP-E-I-- 69 (454)
T ss_dssp CEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC-EEEEEE----------------------CT-T-C--
T ss_pred EEEEEECC-CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc-EeEEec----------------------CC-c-c--
Confidence 66777654 7899999999999988776655689988764 43 222210 00 0 0
Q ss_pred EEeecCCCCcceEEEccC---CCEEEEEecC------------CcEEEEEEccCC--CCCceeEEEe-CC----CCCCce
Q 024436 103 TVLLGNLSFPNGVALSED---GNYILLAETT------------SCRILRYWLKTS--KAGTIEIVAQ-LP----GFPDNI 160 (268)
Q Consensus 103 ~~~~~~~~~pnGia~spd---g~~lyva~~~------------~~~I~~~~~~~~--~~g~~~~~~~-l~----g~Pdgi 160 (268)
.....+...+.||+|+|| ++.|||+.+. ..+|++|+.++. .+...+++.+ ++ ..+.+|
T Consensus 70 ~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l 149 (454)
T 1cru_A 70 VNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRL 149 (454)
T ss_dssp CCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEE
T ss_pred ccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeE
Confidence 000012344679999996 6689999874 469999998642 2333344433 43 248899
Q ss_pred EEcCCCCEEEEEecCC
Q 024436 161 KRSPRGGFWVGIHSRR 176 (268)
Q Consensus 161 a~d~dG~l~va~~~~~ 176 (268)
++++||+||++.....
T Consensus 150 ~f~pDG~Lyv~~Gd~~ 165 (454)
T 1cru_A 150 VIGPDQKIYYTIGDQG 165 (454)
T ss_dssp EECTTSCEEEEECCTT
T ss_pred eECCCCeEEEEECCCC
Confidence 9999999999987653
No 77
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.17 E-value=4.2e-09 Score=89.41 Aligned_cols=133 Identities=8% Similarity=-0.005 Sum_probs=81.8
Q ss_pred ceEEEEeCCCCeEEEeec--CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC
Q 024436 90 GRLMKYDPATKQVTVLLG--NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG 167 (268)
Q Consensus 90 g~v~~~d~~~~~~~~~~~--~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~ 167 (268)
.+|.++|++++++..-.. .-.+..||++. ++.||++...++++++||.+..+ ....+. .++.+.|++.|. +.
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~--~~~ti~-~~~eG~glt~dg-~~ 138 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLR--QVRSFN-YDGEGWGLTHND-QY 138 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCC--EEEEEE-CSSCCCCEEECS-SC
T ss_pred ceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCc--EEEEEE-CCCCceEEecCC-CE
Confidence 356666666666543332 22345566664 56899999999999999987421 122222 344556777653 46
Q ss_pred EEEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCC-CCEEEEEEc-CCCCceeceEEEE
Q 024436 168 FWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQ-GNVLEILEE-IGRKMWRSISEVE 245 (268)
Q Consensus 168 l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~~~-~~g~~~~~~s~~~ 245 (268)
||+++. .+ + +..+|+. .+++..+.- .+|+.+..+..+.
T Consensus 139 L~~SdG-s~-~--------------------------------------i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe 178 (262)
T 3nol_A 139 LIMSDG-TP-V--------------------------------------LRFLDPESLTPVRTITVTAHGEELPELNELE 178 (262)
T ss_dssp EEECCS-SS-E--------------------------------------EEEECTTTCSEEEEEECEETTEECCCEEEEE
T ss_pred EEEECC-CC-e--------------------------------------EEEEcCCCCeEEEEEEeccCCccccccceeE
Confidence 888763 22 1 3344443 344433321 1345555555555
Q ss_pred EeCCEEEEeeCCCCeEEEEeCCC
Q 024436 246 EKDGNLWIGSVNMPYAGLYNYSS 268 (268)
Q Consensus 246 ~~~g~Lyv~s~~~~~v~~~~~~~ 268 (268)
..+|+||++.+..+.|++||.++
T Consensus 179 ~~~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 179 WVDGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp EETTEEEEEETTSSEEEEECTTT
T ss_pred EECCEEEEEEccCCeEEEEECCC
Confidence 66899999999999999999865
No 78
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.17 E-value=4.7e-09 Score=89.21 Aligned_cols=203 Identities=10% Similarity=0.016 Sum_probs=118.3
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEEcCCC---------CCeeEEEeecCCcceEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFARTSPN---------RNHISVILSGDKTGRLM 93 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~~~~~~---------~~~~~~~~~~~~~g~v~ 93 (268)
=+++++.+.-..-.|+.++ ++.+|.+.-.+|+|.+++++. +..... ..+. +..++. .....+.++
T Consensus 45 Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~--ltw~~~~v~ 119 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGERLYQ--LTWTEGLLF 119 (268)
T ss_dssp EEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEE--EESSSCEEE
T ss_pred EEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCEEEE--EEccCCEEE
Confidence 3567777763344799998 355444444568998888754 322222 2111 111111 223568999
Q ss_pred EEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEE--EeCC---CCCCceEEcCCCCE
Q 024436 94 KYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIV--AQLP---GFPDNIKRSPRGGF 168 (268)
Q Consensus 94 ~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~--~~l~---g~Pdgia~d~dG~l 168 (268)
+||+++.++..-... .+.|..+++||+.||+++ .+++|+.+|+++.+. ...+ ..-+ ..++.+.+. +|.|
T Consensus 120 V~D~~Tl~~~~ti~~--~~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v--~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 120 TWSGMPPQRERTTRY--SGEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFAL--VGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp EEETTTTEEEEEEEC--SSCCCCEEEETTEEEEEC-SSSEEEEECTTTCCE--EEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEECCcCcEEEEEeC--CCceeEEecCCCEEEEEC-CCCEEEEEcCCCCeE--EEEEEeCCCCcccccccccEEe-CCEE
Confidence 999998876554433 245666678899999999 589999999875321 1111 1111 134567766 7899
Q ss_pred EEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEe-
Q 024436 169 WVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEK- 247 (268)
Q Consensus 169 ~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~- 247 (268)
|++.|..+. + ....+.+|+++..|.+.. +.+.. +. + ..+.+ ....+++.+
T Consensus 194 yanvw~s~~-I---~vIDp~TG~V~~~Idl~~-----L~~~~-~~---------~-------~~~~~---~vlNGIA~dp 244 (268)
T 3nok_A 194 YANIWHSSD-V---LEIDPATGTVVGVIDASA-----LTRAV-AG---------Q-------VTNPE---AVLNGIAVEP 244 (268)
T ss_dssp EEEETTCSE-E---EEECTTTCBEEEEEECHH-----HHHHH-TT---------T-------CCCTT---CCEEEEEECT
T ss_pred EEEECCCCe-E---EEEeCCCCcEEEEEECCC-----Ccccc-cc---------c-------ccCcC---CceEEEEEcC
Confidence 999987763 1 223456777777776541 00000 00 0 00011 223455543
Q ss_pred -CCEEEEeeCCCCeEEEEeC
Q 024436 248 -DGNLWIGSVNMPYAGLYNY 266 (268)
Q Consensus 248 -~g~Lyv~s~~~~~v~~~~~ 266 (268)
+++|||++-..+++-.|++
T Consensus 245 ~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 245 GSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp TTCCEEEEETTCSEEEEEEE
T ss_pred CCCEEEEeCCCCCceEEEEE
Confidence 4689999988888887765
No 79
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=2.2e-09 Score=94.50 Aligned_cols=141 Identities=13% Similarity=0.143 Sum_probs=87.4
Q ss_pred CCcceEEECCCCCEEEEEe--CCC--eEEEEeCCCCeEEEEEEc----------------CC-CCCeeEEEee-cCCcce
Q 024436 34 IGPESLAFDALGEGPYTGV--SDG--RIIKWHQDQRRWLHFART----------------SP-NRNHISVILS-GDKTGR 91 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~--~~g--~I~~~~~~g~~~~~~~~~----------------~~-~~~~~~~~~~-~~~~g~ 91 (268)
..|++++++++|+++++.. .++ +|+.++ +|+ +..+... .+ ++-|+.+... ..+..+
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 5899999999999777643 234 888888 654 2322110 00 1112222100 011468
Q ss_pred EEEEeCCCCeEEEeec-------CCCCcceEEEccCCCEEEEEec---CCcEEEEEEccCCCCCc------------e--
Q 024436 92 LMKYDPATKQVTVLLG-------NLSFPNGVALSEDGNYILLAET---TSCRILRYWLKTSKAGT------------I-- 147 (268)
Q Consensus 92 v~~~d~~~~~~~~~~~-------~~~~pnGia~spdg~~lyva~~---~~~~I~~~~~~~~~~g~------------~-- 147 (268)
|+++|++++++..... ...+||+|+++++++.+|+++. ..+.|++|++++++... .
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 9999998887433221 1247899999988778999998 78899999987432100 0
Q ss_pred ----eEEE--e-------CCCCCCceEEcCCCC-EEEEEecCC
Q 024436 148 ----EIVA--Q-------LPGFPDNIKRSPRGG-FWVGIHSRR 176 (268)
Q Consensus 148 ----~~~~--~-------l~g~Pdgia~d~dG~-l~va~~~~~ 176 (268)
..+. . ....|+||++++||+ ||++....+
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~ 217 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST 217 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC
Confidence 0000 0 012478999999996 888887665
No 80
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.16 E-value=4.7e-08 Score=85.76 Aligned_cols=143 Identities=13% Similarity=0.122 Sum_probs=85.4
Q ss_pred CCCCcceEEECCCCCEEEEEeCC----CeEE--EEeCCCCeEEEEEEc--CC--------CCCeeEEEeecCCcceEEEE
Q 024436 32 GAIGPESLAFDALGEGPYTGVSD----GRII--KWHQDQRRWLHFART--SP--------NRNHISVILSGDKTGRLMKY 95 (268)
Q Consensus 32 ~~~~P~gia~~~dG~~l~~~~~~----g~I~--~~~~~g~~~~~~~~~--~~--------~~~~~~~~~~~~~~g~v~~~ 95 (268)
....|.+++++|||+.+|+...+ +.|. .++.++..+...... .. ++.++ +......+.+..+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l--~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNI--VTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEE--EEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEE--EEEECCCCEEEEE
Confidence 34589999999999988887654 6774 456652222322211 11 11122 2233345566666
Q ss_pred eCCC-CeEEEee-----c---------CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCC-------CCce---eEE
Q 024436 96 DPAT-KQVTVLL-----G---------NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSK-------AGTI---EIV 150 (268)
Q Consensus 96 d~~~-~~~~~~~-----~---------~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~-------~g~~---~~~ 150 (268)
+.++ +.+..+. . ....|++++|+|||++||+++...++|++|+++... +... ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 5432 3322110 1 123457899999999999999989999999987422 1100 111
Q ss_pred Ee-CCCCCCceEEcCCCC-EEEEEecCC
Q 024436 151 AQ-LPGFPDNIKRSPRGG-FWVGIHSRR 176 (268)
Q Consensus 151 ~~-l~g~Pdgia~d~dG~-l~va~~~~~ 176 (268)
.. ....|.++++++||+ +|++....+
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~ 233 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGG 233 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence 11 224689999999997 777775554
No 81
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.16 E-value=1.3e-08 Score=85.70 Aligned_cols=131 Identities=13% Similarity=0.085 Sum_probs=83.6
Q ss_pred ceEEEEeCCCCeEEEeec--CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CCCCCCceEEcCC
Q 024436 90 GRLMKYDPATKQVTVLLG--NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPR 165 (268)
Q Consensus 90 g~v~~~d~~~~~~~~~~~--~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~g~Pdgia~d~d 165 (268)
.+|.++|++++++..-.. .-.++.||++. +++||+....++++++||.+. .+...+ .++.+.|++.| .
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~t-----l~~~~ti~~~~~Gwglt~d-g 114 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLAT-----LTPRARFRYPGEGWALTSD-D 114 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTT-----TEEEEEEECSSCCCEEEEC-S
T ss_pred ceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCc-----CcEEEEEeCCCCceEEeeC-C
Confidence 466777777776654432 23445566664 568999999999999999874 233333 34556777765 3
Q ss_pred CCEEEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCC-CCEEEEEEc-CCCCceeceEE
Q 024436 166 GGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQ-GNVLEILEE-IGRKMWRSISE 243 (268)
Q Consensus 166 G~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~~~-~~g~~~~~~s~ 243 (268)
++||+++. .+ + +..+|+. .+++..+.- .+|+.+..+..
T Consensus 115 ~~L~vSdg-s~-~--------------------------------------l~~iDp~t~~~~~~I~V~~~g~~~~~lNe 154 (243)
T 3mbr_X 115 SHLYMSDG-TA-V--------------------------------------IRKLDPDTLQQVGSIKVTAGGRPLDNLNE 154 (243)
T ss_dssp SCEEEECS-SS-E--------------------------------------EEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred CEEEEECC-CC-e--------------------------------------EEEEeCCCCeEEEEEEEccCCccccccee
Confidence 47999874 32 2 2333332 333333221 13445555556
Q ss_pred EEEeCCEEEEeeCCCCeEEEEeCCC
Q 024436 244 VEEKDGNLWIGSVNMPYAGLYNYSS 268 (268)
Q Consensus 244 ~~~~~g~Lyv~s~~~~~v~~~~~~~ 268 (268)
....+|+||+..+..|.|++||.++
T Consensus 155 Le~~~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 155 LEWVNGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp EEEETTEEEEEETTTTEEEEECTTT
T ss_pred eEEeCCEEEEEECCCCeEEEEECCC
Confidence 6667999999999999999999875
No 82
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.14 E-value=2.4e-09 Score=97.56 Aligned_cols=162 Identities=12% Similarity=-0.026 Sum_probs=102.0
Q ss_pred ceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEec---------CCcEEEEEEccCCCCCceeEEEeCC------
Q 024436 90 GRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAET---------TSCRILRYWLKTSKAGTIEIVAQLP------ 154 (268)
Q Consensus 90 g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~---------~~~~I~~~~~~~~~~g~~~~~~~l~------ 154 (268)
+.|.+||++++++.........| ||+++|||++|||+++ ..+.|.++|....+. ...+ .++
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v--v~~I-~v~g~~r~~ 174 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP--IADI-ELPDAPRFL 174 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE--EEEE-EETTCCCCC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE--EEEE-ECCCccccc
Confidence 89999999998877665555679 9999999999999986 356899998864321 1111 122
Q ss_pred --CCCCceEEcCCCC-EEEEEecCCCcceeeeEe-eCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEE
Q 024436 155 --GFPDNIKRSPRGG-FWVGIHSRRKGISKLVLS-FPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEIL 230 (268)
Q Consensus 155 --g~Pdgia~d~dG~-l~va~~~~~~~~~~~v~~-~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 230 (268)
..|.++++++||+ +||+....... |.. ...+++++.+|+++.. . ...+.... ..+.+.++|+++.+-
T Consensus 175 ~g~~P~~~~~spDGk~lyV~n~~~~~~----VsVID~~t~kvv~~I~v~g~-~-~~~p~g~~---~~v~~~~dG~~~~V~ 245 (426)
T 3c75_H 175 VGTYQWMNALTPDNKNLLFYQFSPAPA----VGVVDLEGKTFDRMLDVPDC-Y-HIFPASPT---VFYMNCRDGSLARVD 245 (426)
T ss_dssp BSCCGGGSEECTTSSEEEEEECSSSCE----EEEEETTTTEEEEEEECCSE-E-EEEEEETT---EEEEEETTSSEEEEE
T ss_pred cCCCcceEEEcCCCCEEEEEecCCCCe----EEEEECCCCeEEEEEEcCCc-e-eeccCCCc---EEEEEcCCCCEEEEE
Confidence 3699999999996 89988652222 333 4678999999988632 0 01111111 245566677766554
Q ss_pred EcCCCCceec--------------eEEEEEeCCEEEEeeCCCCeEEEEeC
Q 024436 231 EEIGRKMWRS--------------ISEVEEKDGNLWIGSVNMPYAGLYNY 266 (268)
Q Consensus 231 ~~~~g~~~~~--------------~s~~~~~~g~Lyv~s~~~~~v~~~~~ 266 (268)
. .+++.... .......++++|+.+. .+.|.++|.
T Consensus 246 ~-~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~ 293 (426)
T 3c75_H 246 F-ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADL 293 (426)
T ss_dssp C-CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEE
T ss_pred C-CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEec
Confidence 3 33332210 0011223466777665 457777775
No 83
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.14 E-value=4.4e-08 Score=86.47 Aligned_cols=165 Identities=15% Similarity=0.195 Sum_probs=111.6
Q ss_pred CCEEEEecCCCCCcceEEECCCCCEEEEE-eCCCeEEEEeCCCCeEEEEEE---------cCCCCCeeEEEeecCCcceE
Q 024436 23 QGVVQYQIEGAIGPESLAFDALGEGPYTG-VSDGRIIKWHQDQRRWLHFAR---------TSPNRNHISVILSGDKTGRL 92 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~~~dG~~l~~~-~~~g~I~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~~~~~g~v 92 (268)
+.+..+..+. .+.+++++|+|+.+++. ..++.|..++........... ..+++.++. +.....+.|
T Consensus 65 ~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~--~~~~~~~~v 140 (391)
T 1l0q_A 65 NVIATVPAGS--SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLY--VTNNGDKTV 140 (391)
T ss_dssp EEEEEEECSS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEE--EEETTTTEE
T ss_pred eEEEEEECCC--CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEE--EEeCCCCEE
Confidence 3555666665 89999999999977554 467999999987543222211 123333332 234567899
Q ss_pred EEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-EEEE
Q 024436 93 MKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVG 171 (268)
Q Consensus 93 ~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l~va 171 (268)
+.+|..+++..........|++++|+|||+.||++....++|+.|++..+. ..........|.+++++++|+ +|++
T Consensus 141 ~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~~g~~l~~~ 217 (391)
T 1l0q_A 141 SVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS---VIDTVKVEAAPSGIAVNPEGTKAYVT 217 (391)
T ss_dssp EEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEECSSEEEEEEECTTSSEEEEE
T ss_pred EEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe---EEEEEecCCCccceEECCCCCEEEEE
Confidence 999998888766666567789999999999999999899999999987532 222222334688999999997 6666
Q ss_pred Ee--cCCCcceeeeEeeC-ccceeeeecccc
Q 024436 172 IH--SRRKGISKLVLSFP-WIGNVLIKLPID 199 (268)
Q Consensus 172 ~~--~~~~~~~~~v~~~~-~~g~~l~~i~~~ 199 (268)
.. ..+ . |..+. ..++.+..++..
T Consensus 218 ~~~~~~~-~----v~~~d~~~~~~~~~~~~~ 243 (391)
T 1l0q_A 218 NVDKYFN-T----VSMIDTGTNKITARIPVG 243 (391)
T ss_dssp EECSSCC-E----EEEEETTTTEEEEEEECC
T ss_pred ecCcCCC-c----EEEEECCCCeEEEEEecC
Confidence 64 233 2 44443 456666665543
No 84
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.14 E-value=2.6e-08 Score=93.51 Aligned_cols=166 Identities=13% Similarity=0.118 Sum_probs=103.3
Q ss_pred CCEEEEecCCCCCcceEEECC----CCCEEEEEe-CCCeEEEEeCCC-CeEEEEEEc--------------------CCC
Q 024436 23 QGVVQYQIEGAIGPESLAFDA----LGEGPYTGV-SDGRIIKWHQDQ-RRWLHFART--------------------SPN 76 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~~~----dG~~l~~~~-~~g~I~~~~~~g-~~~~~~~~~--------------------~~~ 76 (268)
+.+.+++.+. .|++++++| ||+.+|+.. .++.|..++... +.+..+... +++
T Consensus 213 ~~~~~i~~g~--~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~ 290 (543)
T 1nir_A 213 TKVAEIKIGI--EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 290 (543)
T ss_dssp EEEEEEECCS--EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS
T ss_pred cEEEEEecCC--CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC
Confidence 3566677554 799999999 999998876 479998888653 322222110 111
Q ss_pred CCeeEEEeecCCcceEEEEeCCCCeE-E-EeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC
Q 024436 77 RNHISVILSGDKTGRLMKYDPATKQV-T-VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP 154 (268)
Q Consensus 77 ~~~~~~~~~~~~~g~v~~~d~~~~~~-~-~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~ 154 (268)
++.+ +......+.|+.+|..+++. . .......+|.+++|+|||+++|++....++|.+||.+.++ ........
T Consensus 291 ~~~~--~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~---l~~~i~~g 365 (543)
T 1nir_A 291 HPEF--IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRR---LSALVDVG 365 (543)
T ss_dssp SSEE--EEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTE---EEEEEECS
T ss_pred CCEE--EEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCe---EEEeeccC
Confidence 1111 22335678899999875432 1 1223457899999999999999999989999999987532 21112222
Q ss_pred CCC---CceEE-cCC-CCEEEEEecCCCcceeeeEeeC-cc-------ceeeeecccc
Q 024436 155 GFP---DNIKR-SPR-GGFWVGIHSRRKGISKLVLSFP-WI-------GNVLIKLPID 199 (268)
Q Consensus 155 g~P---dgia~-d~d-G~l~va~~~~~~~~~~~v~~~~-~~-------g~~l~~i~~~ 199 (268)
..| .|..+ +++ |.+|++....... |..+. .. ++.+..++..
T Consensus 366 ~~ph~g~g~~~~~p~~g~~~~s~~~~d~~----V~v~d~~~~~~~~~~~~~v~~l~~~ 419 (543)
T 1nir_A 366 KTPHPGRGANFVHPKYGPVWSTSHLGDGS----ISLIGTDPKNHPQYAWKKVAELQGQ 419 (543)
T ss_dssp SSBCCTTCEEEEETTTEEEEEEEBSSSSE----EEEEECCTTTCTTTBTSEEEEEECS
T ss_pred CCCCCCCCcccCCCCCccEEEeccCCCce----EEEEEeCCCCCchhcCeEEEEEEcC
Confidence 234 25554 676 6789887633222 33332 22 6677777653
No 85
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.13 E-value=2.3e-08 Score=89.60 Aligned_cols=218 Identities=16% Similarity=0.093 Sum_probs=133.7
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCC-eEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeEEE
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQR-RWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~-~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 104 (268)
...+++++++|++++++..++.|..|+.+.. ....+.. ..+++.++. ......+.|+.+|.++++...
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVY--CSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEE--EEETTTTEEEEEETTTTEEEE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEE--EEecCCCcEEEEECCCCcEEE
Confidence 4567899999998888888999999997643 2222221 112233222 233456899999998887766
Q ss_pred eecCCCCcceEEEccCCCEEEEEec-------CCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-EEEEEecCC
Q 024436 105 LLGNLSFPNGVALSEDGNYILLAET-------TSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRR 176 (268)
Q Consensus 105 ~~~~~~~pnGia~spdg~~lyva~~-------~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l~va~~~~~ 176 (268)
.......+.+++++|||+.||++.. .++.|+.|++.+++ .......++.|.+++++++|+ +|++....+
T Consensus 249 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 249 KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK---LIDTIGPPGNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE---EEEEEEEEECEEEEEECSSTTEEEEEETTTT
T ss_pred EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc---EEeeccCCCCcceEEECCCCCEEEEEecCCC
Confidence 6655667899999999999998875 46799999987532 111112234688999999996 777766655
Q ss_pred CcceeeeEeeC-ccceeeeeccccceeeeeeccccCCC---------------------cEEEEEECC-CCCEEEEEEcC
Q 024436 177 KGISKLVLSFP-WIGNVLIKLPIDIVKIHSSLVKLSGN---------------------GGMAMRISE-QGNVLEILEEI 233 (268)
Q Consensus 177 ~~~~~~v~~~~-~~g~~l~~i~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~-~G~~~~~~~~~ 233 (268)
. +..+. ..++.+..++........++.+.... .+.+..++. +++.+..+...
T Consensus 326 ~-----v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~ 400 (433)
T 3bws_A 326 K-----IEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG 400 (433)
T ss_dssp E-----EEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS
T ss_pred E-----EEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC
Confidence 3 44443 35666665543321111111100000 023444444 34555444431
Q ss_pred CCCceeceEEEEE--eCCEEEEeeCCCCeEEEEeCC
Q 024436 234 GRKMWRSISEVEE--KDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 234 ~g~~~~~~s~~~~--~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
..+..+.. .+..||+++..++.|.+++++
T Consensus 401 -----~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 401 -----NQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp -----SSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred -----CCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 12344444 345788888889999998875
No 86
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.12 E-value=1.1e-07 Score=84.99 Aligned_cols=144 Identities=11% Similarity=0.031 Sum_probs=96.6
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE---------------cCCCCCeeEEEeecCC
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR---------------TSPNRNHISVILSGDK 88 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~---------------~~~~~~~~~~~~~~~~ 88 (268)
.+..++.+. .|.+++++|++.+++++..++.|..|+.+......... ..+++. .+.....
T Consensus 115 ~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~s~~~ 189 (433)
T 3bws_A 115 FISRFKTGF--QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE---LWVSQMQ 189 (433)
T ss_dssp EEEEEECSS--CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE---EEEEEGG
T ss_pred EEEEEcCCC--CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE---EEEEECC
Confidence 445555554 68899999988777776678899999976432222110 011111 1234445
Q ss_pred cceEEEEeCCCCeEEE-eecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC
Q 024436 89 TGRLMKYDPATKQVTV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG 167 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~-~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~ 167 (268)
.+.|..+|.++++... +......+++++|+||++.+|++....+.|++|++..+. ........+.|.+++++++|+
T Consensus 190 d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~g~ 266 (433)
T 3bws_A 190 ANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL---EIRKTDKIGLPRGLLLSKDGK 266 (433)
T ss_dssp GTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE---EEEECCCCSEEEEEEECTTSS
T ss_pred CCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc---EEEEecCCCCceEEEEcCCCC
Confidence 6889999988765543 444566789999999999999999888999999987421 111112234588999999996
Q ss_pred -EEEEEecC
Q 024436 168 -FWVGIHSR 175 (268)
Q Consensus 168 -l~va~~~~ 175 (268)
+|++....
T Consensus 267 ~l~~~~~~~ 275 (433)
T 3bws_A 267 ELYIAQFSA 275 (433)
T ss_dssp EEEEEEEES
T ss_pred EEEEEECCC
Confidence 66666543
No 87
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.11 E-value=2.9e-08 Score=85.02 Aligned_cols=185 Identities=12% Similarity=0.092 Sum_probs=125.2
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeC-CCeEEEEeCCCCeEEEEEEcC---------------CCCCeeEEEeecC
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVS-DGRIIKWHQDQRRWLHFARTS---------------PNRNHISVILSGD 87 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~-~g~I~~~~~~g~~~~~~~~~~---------------~~~~~~~~~~~~~ 87 (268)
-+..+..+......+..+.+||+++++... +++|+.++++|+.+..+.... +++++ ++...
T Consensus 67 ~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~---lv~~~ 143 (276)
T 3no2_A 67 ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY---LVPLF 143 (276)
T ss_dssp EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCE---EEEET
T ss_pred EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCE---EEEec
Confidence 444555542234667899999999999888 899999999998654443211 11122 23445
Q ss_pred CcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CC----CCCCceE
Q 024436 88 KTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LP----GFPDNIK 161 (268)
Q Consensus 88 ~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~----g~Pdgia 161 (268)
.+++|+.+|++ |+..--......|.++.+.++|+ ++|++...++|+.|+.++++. .-.+.. ++ ..|.+++
T Consensus 144 ~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~l~~~~~~~ 219 (276)
T 3no2_A 144 ATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRI--VRRVNANDIEGVQLFFVAQLF 219 (276)
T ss_dssp TTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCE--EEEEEGGGSBSCCCSEEEEEE
T ss_pred CCCEEEEECCC-CCEEEEEECCCCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcE--EEEecCCCCCCccccccccce
Confidence 67899999998 76544444345788999999997 778888889999999884321 112221 22 1488999
Q ss_pred EcCCCCEEEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceece
Q 024436 162 RSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSI 241 (268)
Q Consensus 162 ~d~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~ 241 (268)
+.++|++|++.+.+++. +. ..... +.++.++++|+++..|.+. ..+..+
T Consensus 220 ~~~~G~i~v~~~~g~~~-------~~---------------------~~~~~-~~~~~~~~~g~~~W~~~~~--~~~~~~ 268 (276)
T 3no2_A 220 PLQNGGLYICNWQGHDR-------EA---------------------GKGKH-PQLVEIDSEGKVVWQLNDK--VKFGMI 268 (276)
T ss_dssp ECTTSCEEEEEECTTCT-------TG---------------------GGSCC-CSEEEECTTSBEEEEECCT--TTSCCC
T ss_pred EcCCCCEEEEeccCccc-------cc---------------------cccCC-ceEEEECCCCCEEEEecCc--ccccce
Confidence 99999999999877531 00 00011 3488899999999999764 446777
Q ss_pred EEEEE
Q 024436 242 SEVEE 246 (268)
Q Consensus 242 s~~~~ 246 (268)
|++..
T Consensus 269 ~~~~~ 273 (276)
T 3no2_A 269 STICP 273 (276)
T ss_dssp CEEEE
T ss_pred eeeee
Confidence 77643
No 88
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.11 E-value=3.1e-08 Score=88.64 Aligned_cols=102 Identities=14% Similarity=0.035 Sum_probs=69.7
Q ss_pred eEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEec---------CCcEEEEEEccCCCCCceeEEEeCC-------
Q 024436 91 RLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAET---------TSCRILRYWLKTSKAGTIEIVAQLP------- 154 (268)
Q Consensus 91 ~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~---------~~~~I~~~~~~~~~~g~~~~~~~l~------- 154 (268)
.|++||++++++.........| +|+++|||++|||+++ ..+.|.+||.+..+. ...+ .++
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~--~~~i-~~~~~~~~~~ 123 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP--IADI-ELPDAPRFDV 123 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE--EEEE-ECCCcccccc
Confidence 6788888777765444444567 9999999999999985 256799999864211 1111 122
Q ss_pred -CCCCceEEcCCCC-EEEEEecCCCcceeeeEeeCccceeeee-ccccc
Q 024436 155 -GFPDNIKRSPRGG-FWVGIHSRRKGISKLVLSFPWIGNVLIK-LPIDI 200 (268)
Q Consensus 155 -g~Pdgia~d~dG~-l~va~~~~~~~~~~~v~~~~~~g~~l~~-i~~~~ 200 (268)
..|.+++++|||+ ||++....... |..+..+++++.. ++.+.
T Consensus 124 g~~p~~~~~spDG~~l~v~n~~~~~~----v~viD~t~~~~~~~i~~~~ 168 (373)
T 2mad_H 124 GPYSWMNANTPNNADLLFFQFAAGPA----VGLVVQGGSSDDQLLSSPT 168 (373)
T ss_pred CCCccceEECCCCCEEEEEecCCCCe----EEEEECCCCEEeEEcCCCc
Confidence 2599999999996 88887642222 3333367888888 88763
No 89
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.10 E-value=2e-09 Score=101.05 Aligned_cols=198 Identities=13% Similarity=0.034 Sum_probs=120.3
Q ss_pred CCEEEEecCCCCCcceEEE-C-CCCCEEEEEe------------------CCCeEEEEeCCCCeEEEEEE---------c
Q 024436 23 QGVVQYQIEGAIGPESLAF-D-ALGEGPYTGV------------------SDGRIIKWHQDQRRWLHFAR---------T 73 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~-~-~dG~~l~~~~------------------~~g~I~~~~~~g~~~~~~~~---------~ 73 (268)
+....+.+|....|+|+++ . |+++.+|+.. .++.+..||.+...+..... .
T Consensus 123 ~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~ 202 (595)
T 1fwx_A 123 KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDA 202 (595)
T ss_dssp EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEE
T ss_pred eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEE
Confidence 3455566666678999998 5 8999898873 24567777777543221111 1
Q ss_pred CCCCCeeEEEeecC-----------------------------------CcceEEEEeCCC--CeE-EEeecCCCCcceE
Q 024436 74 SPNRNHISVILSGD-----------------------------------KTGRLMKYDPAT--KQV-TVLLGNLSFPNGV 115 (268)
Q Consensus 74 ~~~~~~~~~~~~~~-----------------------------------~~g~v~~~d~~~--~~~-~~~~~~~~~pnGi 115 (268)
++++.|+....... .-+.|..+|..+ +++ .........|.|+
T Consensus 203 spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv 282 (595)
T 1fwx_A 203 DYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGC 282 (595)
T ss_dssp CSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCE
T ss_pred CCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEE
Confidence 22222222111000 013588899986 333 3333334689999
Q ss_pred EEccCCCEEEEEecCCcEEEEEEccCC------CCC-ceeEEEeC--CCCCCceEEcCCCCEEEEEecCCCcceeeeEee
Q 024436 116 ALSEDGNYILLAETTSCRILRYWLKTS------KAG-TIEIVAQL--PGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSF 186 (268)
Q Consensus 116 a~spdg~~lyva~~~~~~I~~~~~~~~------~~g-~~~~~~~l--~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~ 186 (268)
.++|||+++||++..+++|.+|+.+.. ++. ...+..++ ...|.++++|++|++|++.+-... |.++
T Consensus 283 ~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsq-----V~kw 357 (595)
T 1fwx_A 283 NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQ-----VVKW 357 (595)
T ss_dssp EECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTE-----EEEE
T ss_pred EEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCc-----EEEE
Confidence 999999999999999999999999731 111 11233443 246999999999999999998863 4333
Q ss_pred Ccc-----------ceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEEc
Q 024436 187 PWI-----------GNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILEE 232 (268)
Q Consensus 187 ~~~-----------g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 232 (268)
... .+++.++++..++-+.+. .+...+++||+.+.+...
T Consensus 358 di~~a~~~~~g~~~~~vi~kidV~yqpGh~~~-------~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 358 NIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKT-------VMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EHHHHHHHHHTCSCCCEEEEEECSSCEEEEEE-------TTTTSTTCCSSEEEEEES
T ss_pred EhhHhhhhhcccccceeEEEeeccccccccee-------ccceEeCCCCCEEEEcCC
Confidence 311 456777776543211111 012344566777666653
No 90
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.09 E-value=7.1e-08 Score=86.30 Aligned_cols=53 Identities=11% Similarity=-0.011 Sum_probs=38.6
Q ss_pred cceEEEEeCCCCeEEEeec-C-------CCCcceEEEccCCCEEEEEecC-CcEEEEEEccCC
Q 024436 89 TGRLMKYDPATKQVTVLLG-N-------LSFPNGVALSEDGNYILLAETT-SCRILRYWLKTS 142 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~~-~-------~~~pnGia~spdg~~lyva~~~-~~~I~~~~~~~~ 142 (268)
.+.|..||+++.++..... + ...|.+++++|||++|||++.. .+.|.++| +++
T Consensus 96 ~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~ 157 (373)
T 2mad_H 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGG 157 (373)
T ss_pred CCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCC
Confidence 4567777777654432211 1 2579999999999999999865 68999999 753
No 91
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=4.2e-08 Score=83.80 Aligned_cols=134 Identities=10% Similarity=0.070 Sum_probs=87.6
Q ss_pred CcceEEEEeCCCCeEEEee--cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCC-CCCceEEcC
Q 024436 88 KTGRLMKYDPATKQVTVLL--GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPG-FPDNIKRSP 164 (268)
Q Consensus 88 ~~g~v~~~d~~~~~~~~~~--~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g-~Pdgia~d~ 164 (268)
..++|.++|++++++.... +...++.|++++ |++||+++...+++++||.+. .++..+++- .|.|..+.+
T Consensus 42 ~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t-----~~v~~~i~~g~~~g~glt~ 114 (266)
T 2iwa_A 42 GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRT-----LSNIKNFTHQMKDGWGLAT 114 (266)
T ss_dssp TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTT-----TEEEEEEECCSSSCCEEEE
T ss_pred CCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCC-----CcEEEEEECCCCCeEEEEE
Confidence 4679999999999876543 344566677776 568999999999999999874 233333321 366666666
Q ss_pred CC-CEEEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCC-CCEEEEEEc-CCCCceece
Q 024436 165 RG-GFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQ-GNVLEILEE-IGRKMWRSI 241 (268)
Q Consensus 165 dG-~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~~~-~~g~~~~~~ 241 (268)
|| ++|+++ +.+ . +..+|++ .+++..+.- .+++.+..+
T Consensus 115 Dg~~l~vs~-gs~-~--------------------------------------l~viD~~t~~v~~~I~Vg~~~~p~~~~ 154 (266)
T 2iwa_A 115 DGKILYGSD-GTS-I--------------------------------------LYEIDPHTFKLIKKHNVKYNGHRVIRL 154 (266)
T ss_dssp CSSSEEEEC-SSS-E--------------------------------------EEEECTTTCCEEEEEECEETTEECCCE
T ss_pred CCCEEEEEC-CCC-e--------------------------------------EEEEECCCCcEEEEEEECCCCcccccc
Confidence 66 589876 332 1 3333332 233333321 123334444
Q ss_pred EEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 024436 242 SEVEEKDGNLWIGSVNMPYAGLYNYSS 268 (268)
Q Consensus 242 s~~~~~~g~Lyv~s~~~~~v~~~~~~~ 268 (268)
..+...+|+||++++..+.|++||.++
T Consensus 155 nele~~dg~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 155 NELEYINGEVWANIWQTDCIARISAKD 181 (266)
T ss_dssp EEEEEETTEEEEEETTSSEEEEEETTT
T ss_pred eeEEEECCEEEEecCCCCeEEEEECCC
Confidence 455555889999999999999999875
No 92
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=3.2e-08 Score=90.14 Aligned_cols=102 Identities=10% Similarity=-0.073 Sum_probs=62.8
Q ss_pred CCEEEEecCCCCCcceEEECCCCCEEEEEe----------CCCeEEEEeCCCCeEEEEEEc-----------------CC
Q 024436 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGV----------SDGRIIKWHQDQRRWLHFART-----------------SP 75 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~~~dG~~l~~~~----------~~g~I~~~~~~g~~~~~~~~~-----------------~~ 75 (268)
+-+.+|+++. .| +++++|||+.+|+.+ .++.|..||+........... ++
T Consensus 110 ~vv~~I~vG~--~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp 186 (426)
T 3c75_H 110 RILGMTDGGF--LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP 186 (426)
T ss_dssp EEEEEEEECS--SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT
T ss_pred EEEEEEECCC--CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC
Confidence 3567788876 68 999999999888876 367899999865433322222 12
Q ss_pred CCCeeEEEeecCCcceEEEEeCCCCeEEEeecC----CCCcce----EEEccCCCEEEEEe
Q 024436 76 NRNHISVILSGDKTGRLMKYDPATKQVTVLLGN----LSFPNG----VALSEDGNYILLAE 128 (268)
Q Consensus 76 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~----~~~pnG----ia~spdg~~lyva~ 128 (268)
++.+++... ....+.|..+|.+++++..-..- ...|.| +++++||+.+||+.
T Consensus 187 DGk~lyV~n-~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 187 DNKNLLFYQ-FSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp TSSEEEEEE-CSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEEC
T ss_pred CCCEEEEEe-cCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEEC
Confidence 333443321 12367899999998876543321 122334 56666666555554
No 93
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.08 E-value=1.2e-07 Score=81.33 Aligned_cols=143 Identities=13% Similarity=0.052 Sum_probs=90.2
Q ss_pred CEEEEecCCCC-CcceEEECCCCCEEEE-EeCCCeEEEEeCCC-CeEEEEEEc--------------CCCCCeeEEEeec
Q 024436 24 GVVQYQIEGAI-GPESLAFDALGEGPYT-GVSDGRIIKWHQDQ-RRWLHFART--------------SPNRNHISVILSG 86 (268)
Q Consensus 24 ~~~~i~~~~~~-~P~gia~~~dG~~l~~-~~~~g~I~~~~~~g-~~~~~~~~~--------------~~~~~~~~~~~~~ 86 (268)
.+..+..+... .|.+++++|||+.+|+ ...+++|..++... +....+... ++++.++......
T Consensus 23 ~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 102 (337)
T 1pby_B 23 VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESP 102 (337)
T ss_dssp EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEE
T ss_pred EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecc
Confidence 45566666432 4999999999976655 44578999999754 432222211 1223333222100
Q ss_pred -----C----CcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCC
Q 024436 87 -----D----KTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFP 157 (268)
Q Consensus 87 -----~----~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~P 157 (268)
. ..+.|+.+|.++++..........|++++|+|||++||++ ++.|++|++++++ ..........+
T Consensus 103 ~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~---~~~~~~~~~~~ 176 (337)
T 1pby_B 103 VRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL---GRDLHVMDPEAGT---LVEDKPIQSWE 176 (337)
T ss_dssp EEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE---SSSEEEEETTTTE---EEEEECSTTTT
T ss_pred cccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe---CCeEEEEECCCCc---EeeeeeccccC
Confidence 1 3578999999888776555555679999999999999998 4789999987532 11111222224
Q ss_pred CceEEcCCCC-EEEEE
Q 024436 158 DNIKRSPRGG-FWVGI 172 (268)
Q Consensus 158 dgia~d~dG~-l~va~ 172 (268)
..+++++||+ +|++.
T Consensus 177 ~~~~~s~dg~~l~~~~ 192 (337)
T 1pby_B 177 AETYAQPDVLAVWNQH 192 (337)
T ss_dssp TTTBCCCBCCCCCCCC
T ss_pred CCceeCCCccEEeeec
Confidence 5567888886 55544
No 94
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.08 E-value=1.4e-08 Score=95.84 Aligned_cols=173 Identities=10% Similarity=0.033 Sum_probs=106.8
Q ss_pred ecCCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CCCCCCceEE
Q 024436 85 SGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKR 162 (268)
Q Consensus 85 ~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~g~Pdgia~ 162 (268)
.....++|..+|.+++++.........|++++++|||++|||++. .+.|.+||+...+ .+...+ ....|.++++
T Consensus 172 ~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t---~~~v~~i~~G~~P~~ia~ 247 (567)
T 1qks_A 172 TLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKE---PTTVAEIKIGSEARSIET 247 (567)
T ss_dssp EETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET-TSEEEEEETTSSS---CCEEEEEECCSEEEEEEE
T ss_pred EeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC-CCeEEEEECCCCC---CcEeEEEecCCCCceeEE
Confidence 345678899999988877655545567899999999999999974 6799999985111 122233 2346999999
Q ss_pred c----CCCC-EEEEEecCCCcceeeeEe-eCccceeeeeccccce-----------eeeeeccccCCCcEEEEEECCCCC
Q 024436 163 S----PRGG-FWVGIHSRRKGISKLVLS-FPWIGNVLIKLPIDIV-----------KIHSSLVKLSGNGGMAMRISEQGN 225 (268)
Q Consensus 163 d----~dG~-l~va~~~~~~~~~~~v~~-~~~~g~~l~~i~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~G~ 225 (268)
+ +||+ +|+++...+. +.. ...+.+.+..+++... .+..+....... ..++.+..+|+
T Consensus 248 s~~~~pDGk~l~v~n~~~~~-----v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~-~~vv~~~~~g~ 321 (567)
T 1qks_A 248 SKMEGWEDKYAIAGAYWPPQ-----YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP-EFIVNVKETGK 321 (567)
T ss_dssp CCSTTCTTTEEEEEEEETTE-----EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSS-EEEEEETTTTE
T ss_pred ccccCCCCCEEEEEEccCCe-----EEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCC-EEEEEecCCCe
Confidence 9 6996 8888887663 333 3567778887775421 111111111111 34444444455
Q ss_pred EEEEE-Ec---------CCCCceeceEEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 024436 226 VLEIL-EE---------IGRKMWRSISEVEEKDGNLWIGSVNMPYAGLYNYSS 268 (268)
Q Consensus 226 ~~~~~-~~---------~~g~~~~~~s~~~~~~g~Lyv~s~~~~~v~~~~~~~ 268 (268)
+..+- .+ +.++..+ -......+.++|+++..+|.|+++|+++
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~-d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLH-DGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEE-EEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred EEEEecCCCccceeeeeecccccc-CceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 43321 11 0122111 1112224567999999999999999875
No 95
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.07 E-value=5.1e-09 Score=94.10 Aligned_cols=102 Identities=18% Similarity=0.118 Sum_probs=73.4
Q ss_pred cceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEec---------CCcEEEEEEccCCCCCceeEEEeCC-----
Q 024436 89 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAET---------TSCRILRYWLKTSKAGTIEIVAQLP----- 154 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~---------~~~~I~~~~~~~~~~g~~~~~~~l~----- 154 (268)
.+.|+++|++++++.........|+ ++++|||++|||+++ ..+.|.+||....+. ...+ .++
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v--~~~I-~v~~g~r~ 133 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP--TADI-ELPDAPRF 133 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE--EEEE-EETTCCCC
T ss_pred CCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE--EEEE-ECCCcccc
Confidence 4688899998887765555455685 999999999999985 246799999875321 1111 122
Q ss_pred ---CCCCceEEcCCCC-EEEEEec-CCCcceeeeEe-eCccceeeeecccc
Q 024436 155 ---GFPDNIKRSPRGG-FWVGIHS-RRKGISKLVLS-FPWIGNVLIKLPID 199 (268)
Q Consensus 155 ---g~Pdgia~d~dG~-l~va~~~-~~~~~~~~v~~-~~~~g~~l~~i~~~ 199 (268)
..|.++++++||+ +||+... .+ . |.. ...+++++.+|+.+
T Consensus 134 ~~g~~P~~~a~spDGk~lyVan~~~~~-~----VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 134 LVGTYPWMTSLTPDGKTLLFYQFSPAP-A----VGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp CBSCCGGGEEECTTSSEEEEEECSSSC-E----EEEEETTTTEEEEEEECC
T ss_pred ccCCCCceEEEcCCCCEEEEEEcCCCC-e----EEEEECCCCcEEEEEECC
Confidence 1699999999996 8998864 33 2 433 46789999999876
No 96
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.07 E-value=1.4e-07 Score=88.93 Aligned_cols=164 Identities=9% Similarity=-0.060 Sum_probs=111.7
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCC---CCeEEEEE--------EcC----CCCCeeEEEeecCC
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQD---QRRWLHFA--------RTS----PNRNHISVILSGDK 88 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~---g~~~~~~~--------~~~----~~~~~~~~~~~~~~ 88 (268)
-+.+|+++. .|++++++|||+.+|+...++.|..|+.. ++....+. ..+ +++.+++.... .
T Consensus 189 v~~~i~~g~--~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~--~ 264 (567)
T 1qks_A 189 IKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY--W 264 (567)
T ss_dssp EEEEEECSS--CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE--E
T ss_pred EEEEEeCCC--CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEc--c
Confidence 455666665 79999999999999998889999999983 33222111 123 35555544322 3
Q ss_pred cceEEEEeCCCCeEEEeec--C----------CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEE-EeCCC
Q 024436 89 TGRLMKYDPATKQVTVLLG--N----------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIV-AQLPG 155 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~~--~----------~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~-~~l~g 155 (268)
.+.+..+|.++.++..... + .....+|..++++..++++...+++|+.++..... ...+. .....
T Consensus 265 ~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~--~~~v~~i~~~~ 342 (567)
T 1qks_A 265 PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN--NLKTTEISAER 342 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS--EEEEEEEECCS
T ss_pred CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc--cceeeeeeccc
Confidence 4678888988776544321 1 11346899999999999999899999999987432 11111 12234
Q ss_pred CCCceEEcCCCC-EEEEEecCCCcceeeeEe-eCccceeeeeccc
Q 024436 156 FPDNIKRSPRGG-FWVGIHSRRKGISKLVLS-FPWIGNVLIKLPI 198 (268)
Q Consensus 156 ~Pdgia~d~dG~-l~va~~~~~~~~~~~v~~-~~~~g~~l~~i~~ 198 (268)
.|+++.+|++|+ +|+++...+ + |.. ...+++++..+++
T Consensus 343 ~~~d~~~~pdgr~~~va~~~sn-~----V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 343 FLHDGGLDGSHRYFITAANARN-K----LVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp SEEEEEECTTSCEEEEEEGGGT-E----EEEEETTTTEEEEEEEC
T ss_pred cccCceECCCCCEEEEEeCCCC-e----EEEEECCCCcEEEEEec
Confidence 688999999997 677777665 3 333 4578888888877
No 97
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.07 E-value=1.8e-08 Score=88.22 Aligned_cols=130 Identities=12% Similarity=0.130 Sum_probs=78.4
Q ss_pred EEEecCCCCCcceEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCeeEEEeecCCcceEEEEeCCC--CeE
Q 024436 26 VQYQIEGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNHISVILSGDKTGRLMKYDPAT--KQV 102 (268)
Q Consensus 26 ~~i~~~~~~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~--~~~ 102 (268)
..|+.+. ..||++++++. |.+|+++..+++|.++++++...+.+ .++.-+ +
T Consensus 6 i~~~~~~-~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-----------------------~~~~~s~~g-- 59 (334)
T 2p9w_A 6 IDVKVKN-LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-----------------------VIDGASSNG-- 59 (334)
T ss_dssp EEECCTT-CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-----------------------CCTTTCCSS--
T ss_pred EEecCcc-cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-----------------------ecCCccccC--
Confidence 3444443 58999999884 55445555789999999875432221 000000 1
Q ss_pred EEeecCCCCcceEEE---ccCCCEEEE-Eec------------CCcEEEEEEccCCCCCceeEEEeCC------------
Q 024436 103 TVLLGNLSFPNGVAL---SEDGNYILL-AET------------TSCRILRYWLKTSKAGTIEIVAQLP------------ 154 (268)
Q Consensus 103 ~~~~~~~~~pnGia~---spdg~~lyv-a~~------------~~~~I~~~~~~~~~~g~~~~~~~l~------------ 154 (268)
+....|.||.+ +|+|+ |+| ++. ..+.|.+|++++...+......+|+
T Consensus 60 ----~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~ 134 (334)
T 2p9w_A 60 ----DGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGK 134 (334)
T ss_dssp ----CCSEEEEEEEESSSSSCCE-EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSS
T ss_pred ----CCcceeeEEEEeccCCCCc-EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccc
Confidence 11123579999 78864 666 552 3578999999822112222233331
Q ss_pred --CCCCceEEcCCCCEEEEEecC-CCcceeeeEeeCccce
Q 024436 155 --GFPDNIKRSPRGGFWVGIHSR-RKGISKLVLSFPWIGN 191 (268)
Q Consensus 155 --g~Pdgia~d~dG~l~va~~~~-~~~~~~~v~~~~~~g~ 191 (268)
+.|+.|++|++|+.||+.... .. |.+..++|+
T Consensus 135 ~~~~~nDvavD~~GnaYVt~s~~~~~-----I~rV~pdG~ 169 (334)
T 2p9w_A 135 RPFGVVQSAQDRDGNSYVAFALGMPA-----IARVSADGK 169 (334)
T ss_dssp CCEEEEEEEECTTSCEEEEEEESSCE-----EEEECTTSC
T ss_pred cccCCceeEECCCCCEEEeCCCCCCe-----EEEEeCCCC
Confidence 248899999999999977654 32 445555554
No 98
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.07 E-value=9.1e-08 Score=82.31 Aligned_cols=149 Identities=12% Similarity=0.178 Sum_probs=92.6
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEe-CCCeEEEEeC-CCCeEEEEEE-----------cCCCCCeeEEEeecCCcc
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGV-SDGRIIKWHQ-DQRRWLHFAR-----------TSPNRNHISVILSGDKTG 90 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~-~~g~I~~~~~-~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~g 90 (268)
.+..++.+. .|.+++++|+|+.+++.. .++.|..++. ++........ .++++.++. ......+
T Consensus 76 ~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~--~~~~~~~ 151 (343)
T 1ri6_A 76 FAAESALPG--SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLW--VPALKQD 151 (343)
T ss_dssp EEEEEECSS--CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEE--EEEGGGT
T ss_pred eccccccCC--CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEE--EecCCCC
Confidence 344455544 799999999999776655 4788888876 3321111111 122333332 2323456
Q ss_pred eEEEEeCCC-CeEEEe------ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC--CCCCceeEEEeCC------C
Q 024436 91 RLMKYDPAT-KQVTVL------LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT--SKAGTIEIVAQLP------G 155 (268)
Q Consensus 91 ~v~~~d~~~-~~~~~~------~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~--~~~g~~~~~~~l~------g 155 (268)
.|+.+|.++ +++... ......|++++|+|||++||+++...++|..|+++. +.......+..++ .
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 231 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 231 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCC
T ss_pred EEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccC
Confidence 788877765 655421 223457899999999999999998889999999963 2221122222222 1
Q ss_pred CCCceEEcCCCC-EEEEEecCC
Q 024436 156 FPDNIKRSPRGG-FWVGIHSRR 176 (268)
Q Consensus 156 ~Pdgia~d~dG~-l~va~~~~~ 176 (268)
.|.+++++++|+ ||++....+
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~ 253 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTAS 253 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTT
T ss_pred CccceEECCCCCEEEEEecCCC
Confidence 344699999996 666665544
No 99
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.06 E-value=1.3e-08 Score=90.45 Aligned_cols=138 Identities=14% Similarity=0.022 Sum_probs=83.7
Q ss_pred cceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEec---------CCcEEEEEEccCCCCCceeEEEeC------
Q 024436 89 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAET---------TSCRILRYWLKTSKAGTIEIVAQL------ 153 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~---------~~~~I~~~~~~~~~~g~~~~~~~l------ 153 (268)
.+.|++||++++++.........| +++|+|||++||+++. ..+.|.+|+.+..+. ...+...
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~--~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF--EKEISLPPKRVQG 106 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE--EEEEEECTTBCCB
T ss_pred cCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE--EEEEEcCcccccc
Confidence 457888888777765444444568 9999999999999985 246799999864221 1222111
Q ss_pred CCCCCceEEcCCCC-EEEEEecCCCcceeeeEee-Cccceeeee-ccccceeeeeeccccCCCcEEEEEECCCCCEEEEE
Q 024436 154 PGFPDNIKRSPRGG-FWVGIHSRRKGISKLVLSF-PWIGNVLIK-LPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEIL 230 (268)
Q Consensus 154 ~g~Pdgia~d~dG~-l~va~~~~~~~~~~~v~~~-~~~g~~l~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 230 (268)
...|.++++++||+ ||++....... |..+ ..+++.+.. ++.+........+.. + ...+.+.++|++..+-
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~----v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~-~--~~~~~~~~dg~~~~v~ 179 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATS----IGIVDVAKGDYVEDVTAAAGCWSVIPQPNR-P--RSFMTICGDGGLLTIN 179 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEE----EEEEETTTTEEEEEEGGGTTEEEEEECTTS-S--SEEEEEETTSSEEEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCCe----EEEEECCCCcEEEEEecCCCcceeEEcCCC-C--eeEEEECCCCcEEEEE
Confidence 13699999999996 78888752222 4444 467888888 776532111111111 1 1245556666655544
Q ss_pred EcCCCC
Q 024436 231 EEIGRK 236 (268)
Q Consensus 231 ~~~~g~ 236 (268)
.+.+|+
T Consensus 180 ~~~~g~ 185 (361)
T 2oiz_A 180 LGEDGK 185 (361)
T ss_dssp ECTTSS
T ss_pred ECCCCc
Confidence 333343
No 100
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.02 E-value=1.6e-07 Score=83.34 Aligned_cols=85 Identities=12% Similarity=0.034 Sum_probs=59.5
Q ss_pred EEEccCCCEEEEEec----------CCcEEEEEEccCCCCCceeEEEe--CCCCCCceEEcCCCC-EEEEEecCCCccee
Q 024436 115 VALSEDGNYILLAET----------TSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGG-FWVGIHSRRKGISK 181 (268)
Q Consensus 115 ia~spdg~~lyva~~----------~~~~I~~~~~~~~~~g~~~~~~~--l~g~Pdgia~d~dG~-l~va~~~~~~~~~~ 181 (268)
++++||++++||+.. ..++|++||.+.. +.+.. .+. |.+|++++||+ ||++.. + .
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-----~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~-~--- 326 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-----QRVARIPGRD-ALSMTIDQQRNLMLTLDG--G-N--- 326 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-----EEEEEEECTT-CCEEEEETTTTEEEEECS--S-C---
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC-----cEEEEEecCC-eeEEEECCCCCEEEEeCC--C-e---
Confidence 999999999999865 2458999998742 33333 456 99999999997 566554 3 2
Q ss_pred eeEee-Cccc--eeeeec-cccceeeeeeccccCCCcEEEEEECCCCC
Q 024436 182 LVLSF-PWIG--NVLIKL-PIDIVKIHSSLVKLSGNGGMAMRISEQGN 225 (268)
Q Consensus 182 ~v~~~-~~~g--~~l~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 225 (268)
|..+ ..++ +.+.++ +.+. . ...+.++|+|+
T Consensus 327 -v~v~D~~t~~l~~~~~i~~~G~------------~-P~~~~~~p~G~ 360 (361)
T 2oiz_A 327 -VNVYDISQPEPKLLRTIEGAAE------------A-SLQVQFHPVGG 360 (361)
T ss_dssp -EEEEECSSSSCEEEEEETTSCS------------S-EEEEEECCCSC
T ss_pred -EEEEECCCCcceeeEEeccCCC------------C-cEEEEecCCCC
Confidence 4444 4678 888876 3331 1 45678888875
No 101
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.00 E-value=1e-06 Score=74.77 Aligned_cols=142 Identities=13% Similarity=0.142 Sum_probs=83.9
Q ss_pred ecCCC-CCcceEEECCCCCEEEE-EeCCCeEEEEeCCCCeEEEEEEcC----------CCCCeeEEEeecCCcceEEEEe
Q 024436 29 QIEGA-IGPESLAFDALGEGPYT-GVSDGRIIKWHQDQRRWLHFARTS----------PNRNHISVILSGDKTGRLMKYD 96 (268)
Q Consensus 29 ~~~~~-~~P~gia~~~dG~~l~~-~~~~g~I~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~g~v~~~d 96 (268)
++++. ..+.|++++|+++.+|+ ...+++|++++++|+.+..+...+ +++.|+ +.....++++.++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~---vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFV---ISDERDYAIYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEE---EEETTTTEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEE---EEECCCCcEEEEE
Confidence 67765 67999999998776665 677899999999987544432111 111121 2223446666554
Q ss_pred --CCCCeEE---EeecCC-CCc-----ceEEEccCCCEEEEEecCCc-EEEEEEccCCC-CCceeEEEe------C-CCC
Q 024436 97 --PATKQVT---VLLGNL-SFP-----NGVALSEDGNYILLAETTSC-RILRYWLKTSK-AGTIEIVAQ------L-PGF 156 (268)
Q Consensus 97 --~~~~~~~---~~~~~~-~~p-----nGia~spdg~~lyva~~~~~-~I~~~~~~~~~-~g~~~~~~~------l-~g~ 156 (268)
.+ +++. ...-.+ ..+ .||+++|++++||++..... +|+.|+ +-. ........+ + -.-
T Consensus 98 v~~~-~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 98 LTPN-SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp ECTT-CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHHHHTCCSSC
T ss_pred cCCC-CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhhccccccCC
Confidence 44 3222 111111 234 79999999999999865544 788887 210 011222211 1 124
Q ss_pred CCceEEcCC-CCEEEEEecCC
Q 024436 157 PDNIKRSPR-GGFWVGIHSRR 176 (268)
Q Consensus 157 Pdgia~d~d-G~l~va~~~~~ 176 (268)
+.++++||. |++|+-...++
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~ 195 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESR 195 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTT
T ss_pred ceeEEEcCCCCeEEEEECCCC
Confidence 788999985 56777665554
No 102
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.99 E-value=4.6e-08 Score=86.98 Aligned_cols=142 Identities=12% Similarity=0.120 Sum_probs=85.3
Q ss_pred CCCcceEEECCC----CCEEEEEeC---C----CeEEEEeCCCC--eE---EEE-EEcC------CCC------CeeEEE
Q 024436 33 AIGPESLAFDAL----GEGPYTGVS---D----GRIIKWHQDQR--RW---LHF-ARTS------PNR------NHISVI 83 (268)
Q Consensus 33 ~~~P~gia~~~d----G~~l~~~~~---~----g~I~~~~~~g~--~~---~~~-~~~~------~~~------~~~~~~ 83 (268)
..+|.||+++|+ |.+|++... + ++|.|++.++. .+ ..+ .... +++ .+++..
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 467999999998 554444332 3 78999987653 11 111 1111 110 122221
Q ss_pred eec-----------CCcceEEEEeCCCCe---------EEEeecCCCCcceEEEccCCCEEEEEecCCcE---EEEEEcc
Q 024436 84 LSG-----------DKTGRLMKYDPATKQ---------VTVLLGNLSFPNGVALSEDGNYILLAETTSCR---ILRYWLK 140 (268)
Q Consensus 84 ~~~-----------~~~g~v~~~d~~~~~---------~~~~~~~~~~pnGia~spdg~~lyva~~~~~~---I~~~~~~ 140 (268)
..+ ...|+|+|++++ |+ .+....++..|+||+|+|+...||++|...++ |.++..
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~- 229 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK- 229 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT-
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC-
Confidence 111 234799999998 54 45677888999999999943359999987754 555542
Q ss_pred CCCCC------------ceeEEEeC---CCCCCceEE-------cCCCCEEEEEecCC
Q 024436 141 TSKAG------------TIEIVAQL---PGFPDNIKR-------SPRGGFWVGIHSRR 176 (268)
Q Consensus 141 ~~~~g------------~~~~~~~l---~g~Pdgia~-------d~dG~l~va~~~~~ 176 (268)
+...| ........ ...|.|+++ +.+|++|++.+...
T Consensus 230 G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~ 287 (354)
T 3a9g_A 230 GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGS 287 (354)
T ss_dssp TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTT
T ss_pred CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCC
Confidence 22111 01111122 135899999 56789999987765
No 103
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.97 E-value=1e-07 Score=84.18 Aligned_cols=141 Identities=15% Similarity=0.186 Sum_probs=86.5
Q ss_pred CCCcceEEECCCCCEEEEEe-CCCeEEEEeCC--CCeEEEEE--E------------cCCCCCeeEEEeecCCcceEEEE
Q 024436 33 AIGPESLAFDALGEGPYTGV-SDGRIIKWHQD--QRRWLHFA--R------------TSPNRNHISVILSGDKTGRLMKY 95 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~-~~g~I~~~~~~--g~~~~~~~--~------------~~~~~~~~~~~~~~~~~g~v~~~ 95 (268)
...|++++++|||+.+|+.. .+++|..++.+ |+. .... . .++++.++....+....-.+|.+
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 35799999999999777654 57889888764 442 2211 1 12223343322222223345566
Q ss_pred eCCCCeEEE----e---ecCC---C-------CcceEE-EccCCCEEEEEecCCc-----EEEEEEccCCCCCceeE---
Q 024436 96 DPATKQVTV----L---LGNL---S-------FPNGVA-LSEDGNYILLAETTSC-----RILRYWLKTSKAGTIEI--- 149 (268)
Q Consensus 96 d~~~~~~~~----~---~~~~---~-------~pnGia-~spdg~~lyva~~~~~-----~I~~~~~~~~~~g~~~~--- 149 (268)
|+++++... + ..+. . .|++++ |+|||++||+++...+ +|.+|+++.. +....
T Consensus 223 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~--g~~~~~~~ 300 (365)
T 1jof_A 223 DPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC--GSIEKQLF 300 (365)
T ss_dssp CTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT--SCEEEEEE
T ss_pred eCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC--CCEEEeee
Confidence 765666431 1 1111 2 488999 9999999999987666 8999998621 22332
Q ss_pred EEe-CCCCCCceEEcC---CCC-EEEEEecCC
Q 024436 150 VAQ-LPGFPDNIKRSP---RGG-FWVGIHSRR 176 (268)
Q Consensus 150 ~~~-l~g~Pdgia~d~---dG~-l~va~~~~~ 176 (268)
... ....|.+++++| ||+ ||++....+
T Consensus 301 ~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~ 332 (365)
T 1jof_A 301 LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEG 332 (365)
T ss_dssp EEECSSCCTTCCCEEECTTCTTEEEEECSSSC
T ss_pred eeecCCCCcccceecCCCcCCCEEEEEEcCCC
Confidence 122 234699999999 786 666665544
No 104
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.97 E-value=3e-07 Score=78.83 Aligned_cols=78 Identities=13% Similarity=0.067 Sum_probs=47.3
Q ss_pred CCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-EEEEEecCCCcceeeeEee-C
Q 024436 110 SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRRKGISKLVLSF-P 187 (268)
Q Consensus 110 ~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l~va~~~~~~~~~~~v~~~-~ 187 (268)
..|++++|+|||++||++ .++|++|++++++ .......+..|.++++++||+ +|++.. .+ . |..+ .
T Consensus 241 ~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~-~----i~v~d~ 308 (337)
T 1pby_B 241 VFYFSTAVNPAKTRAFGA---YNVLESFDLEKNA---SIKRVPLPHSYYSVNVSTDGSTVWLGGA-LG-D----LAAYDA 308 (337)
T ss_dssp SCEEEEEECTTSSEEEEE---ESEEEEEETTTTE---EEEEEECSSCCCEEEECTTSCEEEEESB-SS-E----EEEEET
T ss_pred CceeeEEECCCCCEEEEe---CCeEEEEECCCCc---CcceecCCCceeeEEECCCCCEEEEEcC-CC-c----EEEEEC
Confidence 356678888888888887 3788888876421 111122344688888888887 566532 22 2 3333 3
Q ss_pred ccceeeeecccc
Q 024436 188 WIGNVLIKLPID 199 (268)
Q Consensus 188 ~~g~~l~~i~~~ 199 (268)
.+++.+..++.+
T Consensus 309 ~~~~~~~~~~~~ 320 (337)
T 1pby_B 309 ETLEKKGQVDLP 320 (337)
T ss_dssp TTCCEEEEEECG
T ss_pred cCCcEEEEEEcC
Confidence 456666665554
No 105
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.96 E-value=1.7e-08 Score=90.25 Aligned_cols=159 Identities=8% Similarity=-0.172 Sum_probs=95.6
Q ss_pred eEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEec---------CCcEEEEEEccCCCCCceeEEEeCC-------
Q 024436 91 RLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAET---------TSCRILRYWLKTSKAGTIEIVAQLP------- 154 (268)
Q Consensus 91 ~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~---------~~~~I~~~~~~~~~~g~~~~~~~l~------- 154 (268)
+|..||++++++..-......| |++++|||++|||+++ ..+.|.+||+...+. ...+ .++
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v--v~~I-~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP--IADI-ELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE--EEEE-EETTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE--EEEE-ECCCcccccc
Confidence 8889999988876655445668 9999999999999984 368899999875321 1111 122
Q ss_pred -CCCCceEEcCCCC-EEEEEecCCCcceeeeEe--eCccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEE
Q 024436 155 -GFPDNIKRSPRGG-FWVGIHSRRKGISKLVLS--FPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEIL 230 (268)
Q Consensus 155 -g~Pdgia~d~dG~-l~va~~~~~~~~~~~v~~--~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 230 (268)
..|.++++++||+ +||+....... +.. ..... +.+++.+. ++. ..+.. . ...+...++|+++..-
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~----v~V~~iD~~t--v~~i~v~~-~~~-~~p~g-~--~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAA----AGLSVPGASD--DQLTKSAS-CFH-IHPGA-A--ATHYLGSCPASLAASD 191 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCE----EEEEETTTEE--EEEEECSS-CCC-CEEEE-T--TEEECCCCTTSCEEEE
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCe----EEEEEEchhh--ceEEECCC-ceE-EccCC-C--eEEEEEcCCCCEEEEE
Confidence 2599999999995 89998753322 333 32211 55665541 111 11111 1 1234555667664432
Q ss_pred EcC----CCCcee----------ceEEEEEeCCEEEEeeCCCCeEEEEeCC
Q 024436 231 EEI----GRKMWR----------SISEVEEKDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 231 ~~~----~g~~~~----------~~s~~~~~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
.+. +|+... .+. +...++++|+.+. +.|.++|++
T Consensus 192 ~~~~~~~~~~v~~~~t~~i~vg~~P~-~~~~~~~~~~vs~--~~V~viD~~ 239 (368)
T 1mda_H 192 LAAAPAAAGIVGAQCTGAQNCSSQAA-QANYPGMLVWAVA--SSILQGDIP 239 (368)
T ss_dssp CCSSCCCCEECCCCSCTTSCBCSCCE-EETTTTEEEECBS--SCCEEEECC
T ss_pred CccccccCCeEEEEeeeeeeCCCCcc-ccccCCEEEEEcC--CEEEEEECC
Confidence 221 122210 111 2445677777776 889988874
No 106
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.95 E-value=9.1e-08 Score=87.14 Aligned_cols=189 Identities=10% Similarity=0.052 Sum_probs=117.5
Q ss_pred CCCcceEEECCCCCEEEEEeCC------CeEEEEeCCCCeEEEEEEcC-------------CCCCeeEEEee--------
Q 024436 33 AIGPESLAFDALGEGPYTGVSD------GRIIKWHQDQRRWLHFARTS-------------PNRNHISVILS-------- 85 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~------g~I~~~~~~g~~~~~~~~~~-------------~~~~~~~~~~~-------- 85 (268)
...|+++.+.||| ++++...+ |.|..+|.++..+...-..+ ++++.+... +
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS-~wg~p~~~~ 214 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSS-EWAVPNTIE 214 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEEC-BCCCHHHHT
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEc-cCcCccccc
Confidence 3479999999999 77776655 89999998743333221111 112222111 0
Q ss_pred ---------cCCcceEEEEeCCCCeEEEeecC---CCCcceEEE--ccCCCEEEEEec-----CCcEEEEEEccCCCCCc
Q 024436 86 ---------GDKTGRLMKYDPATKQVTVLLGN---LSFPNGVAL--SEDGNYILLAET-----TSCRILRYWLKTSKAGT 146 (268)
Q Consensus 86 ---------~~~~g~v~~~d~~~~~~~~~~~~---~~~pnGia~--spdg~~lyva~~-----~~~~I~~~~~~~~~~g~ 146 (268)
.....+|..||.+++++.....- ...|.+|.| +|||+++||+.. .++.|++|..+++....
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~ 294 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA 294 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE
Confidence 02357899999987765543322 246888877 999999999998 88999988877532211
Q ss_pred eeEE--E------eC----------CCCCCceEEcCCCC-EEEEEecCCCcceeeeEeeC----ccceeeeeccccce--
Q 024436 147 IEIV--A------QL----------PGFPDNIKRSPRGG-FWVGIHSRRKGISKLVLSFP----WIGNVLIKLPIDIV-- 201 (268)
Q Consensus 147 ~~~~--~------~l----------~g~Pdgia~d~dG~-l~va~~~~~~~~~~~v~~~~----~~g~~l~~i~~~~~-- 201 (268)
..++ . .+ ++.|.+|.+++||+ |||++++.+. |.+|. ...+++..++++-.
T Consensus 295 ~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~-----VavfdV~d~~~~~lv~~I~tGG~~~ 369 (462)
T 2ece_A 295 EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE-----VRQYDISNPFKPVLTGKVKLGGIFH 369 (462)
T ss_dssp EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE-----EEEEECSSTTSCEEEEEEECBTTTT
T ss_pred EEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE-----EEEEEecCCCCcEEEEEEEeCCeec
Confidence 1111 0 11 25689999999997 8999998874 55543 23567777766410
Q ss_pred eeeeecc---ccCCCcEEEEEECCCCCEEEEEE
Q 024436 202 KIHSSLV---KLSGNGGMAMRISEQGNVLEILE 231 (268)
Q Consensus 202 ~~~~~~~---~~~~~~~~~~~~~~~G~~~~~~~ 231 (268)
.+-.+-+ ...|+ -+.+++||+.+.+..
T Consensus 370 ~~~~~~G~~~~ggPr---~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 370 RADHPAGHKLTGAPQ---MLEISRDGRRVYVTN 399 (462)
T ss_dssp CBCCTTSCCCCSCCC---CEEECTTSSEEEEEC
T ss_pred cccccccccCCCCCC---EEEEcCCCCEEEEEc
Confidence 0000000 01233 578888888777765
No 107
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.94 E-value=1.1e-06 Score=81.48 Aligned_cols=220 Identities=15% Similarity=0.147 Sum_probs=129.6
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE---------cCCCCCeeEEEeecCCcceEEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR---------TSPNRNHISVILSGDKTGRLMK 94 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~ 94 (268)
.+..+... .....+++++|+|+.++++..++.|..++.+++....+.. .++++.++. ....++.|..
T Consensus 336 ~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~---~~~~d~~v~~ 411 (577)
T 2ymu_A 336 HLQTLTGH-SSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIA---SASDDKTVKL 411 (577)
T ss_dssp EEEEECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEE---EEETTSEEEE
T ss_pred eeEEEeCC-CCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEE---EEeCCCEEEE
Confidence 44444322 3457889999999999999999999999988765433321 123333332 2234577888
Q ss_pred EeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEec
Q 024436 95 YDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHS 174 (268)
Q Consensus 95 ~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~ 174 (268)
+|.....+..+...-....+++|+||+++|. +.+..+.|..|+.++.. ...+..-......++++|||+++++...
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~-~~~~d~~v~~w~~~~~~---~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 412 WNRNGQLLQTLTGHSSSVWGVAFSPDDQTIA-SASDDKTVKLWNRNGQL---LQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp ECTTCCEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTSCE---EEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred EeCCCCEEEEecCCCCCeEEEEECCCCCEEE-EEcCCCEEEEEECCCCE---EEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 8876444455555555568999999998665 55577899999976421 2222222234568999999998777665
Q ss_pred CCCcceeeeEeeCccceeeeeccccceeeeeec-c-------ccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEE
Q 024436 175 RRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSL-V-------KLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEE 246 (268)
Q Consensus 175 ~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~ 246 (268)
.+. |..+..+++.+..+......++++. . ..... +.+...+.+|+.+..+....+. ++.+..
T Consensus 488 d~~-----i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-g~v~lwd~~~~~~~~~~~h~~~----v~~~~f 557 (577)
T 2ymu_A 488 DKT-----VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD-KTVKLWNRNGQLLQTLTGHSSS----VWGVAF 557 (577)
T ss_dssp TSE-----EEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETT-SEEEEECTTSCEEEEEECCSSC----EEEEEE
T ss_pred CCE-----EEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECc-CEEEEEeCCCCEEEEEcCCCCC----EEEEEE
Confidence 543 4445566776665543222232221 0 01111 3445556667777777654332 344444
Q ss_pred -eCCEEEEeeCCCCeE
Q 024436 247 -KDGNLWIGSVNMPYA 261 (268)
Q Consensus 247 -~~g~Lyv~s~~~~~v 261 (268)
.+++.+++...+..|
T Consensus 558 s~dg~~l~s~~~D~~i 573 (577)
T 2ymu_A 558 SPDGQTIASASSDKTV 573 (577)
T ss_dssp CTTSSCEEEEETTSCE
T ss_pred cCCCCEEEEEeCCCEE
Confidence 455544443334444
No 108
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.94 E-value=3e-08 Score=84.26 Aligned_cols=134 Identities=10% Similarity=-0.013 Sum_probs=87.3
Q ss_pred CCcceEEEEeCCCCeEEEe-ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CCCCCCceEEc
Q 024436 87 DKTGRLMKYDPATKQVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRS 163 (268)
Q Consensus 87 ~~~g~v~~~d~~~~~~~~~-~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~g~Pdgia~d 163 (268)
...|+|.++|++++++..- .+.-.+..||++. |+.||++...++++++||.+. .+...+ .++.+.|++.|
T Consensus 72 G~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~T-----l~~~~ti~~~~eGwGLt~D 144 (268)
T 3nok_A 72 GHQGTLRQLSLESAQPVWMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMP-----PQRERTTRYSGEGWGLCYW 144 (268)
T ss_dssp TTTTEEEECCSSCSSCSEEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTT-----TEEEEEEECSSCCCCEEEE
T ss_pred CCCCEEEEEECCCCcEEeEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCc-----CcEEEEEeCCCceeEEecC
Confidence 4556799999999876433 3334455677665 557999999999999999874 233333 33456677765
Q ss_pred CCCCEEEEEecCCCcceeeeEeeCccceeeeeccccceeeeeeccccCCCcEEEEEECCC-CCEEEEEEc-CCCCceece
Q 024436 164 PRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQ-GNVLEILEE-IGRKMWRSI 241 (268)
Q Consensus 164 ~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~~~-~~g~~~~~~ 241 (268)
. ++||+++. .+ + +..+|++ .+++..+.- .+|+.+..+
T Consensus 145 g-~~L~vSdG-s~-~--------------------------------------l~~iDp~T~~v~~~I~V~~~g~~v~~l 183 (268)
T 3nok_A 145 N-GKLVRSDG-GT-M--------------------------------------LTFHEPDGFALVGAVQVKLRGQPVELI 183 (268)
T ss_dssp T-TEEEEECS-SS-E--------------------------------------EEEECTTTCCEEEEEECEETTEECCCE
T ss_pred C-CEEEEECC-CC-E--------------------------------------EEEEcCCCCeEEEEEEeCCCCcccccc
Confidence 3 46888863 32 1 3333332 333333221 134445555
Q ss_pred EEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 024436 242 SEVEEKDGNLWIGSVNMPYAGLYNYSS 268 (268)
Q Consensus 242 s~~~~~~g~Lyv~s~~~~~v~~~~~~~ 268 (268)
......+|+||++.+..+.|++||.++
T Consensus 184 NeLe~~dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 184 NELECANGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp EEEEEETTEEEEEETTCSEEEEECTTT
T ss_pred cccEEeCCEEEEEECCCCeEEEEeCCC
Confidence 666667899999999999999999875
No 109
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.91 E-value=4.2e-07 Score=79.56 Aligned_cols=145 Identities=12% Similarity=0.064 Sum_probs=90.9
Q ss_pred CEEEEecCCCC-------CcceEEE---CCCCCEEEEEe-------------CCCeEEEEeCC----CCeEEEEEEc---
Q 024436 24 GVVQYQIEGAI-------GPESLAF---DALGEGPYTGV-------------SDGRIIKWHQD----QRRWLHFART--- 73 (268)
Q Consensus 24 ~~~~i~~~~~~-------~P~gia~---~~dG~~l~~~~-------------~~g~I~~~~~~----g~~~~~~~~~--- 73 (268)
.+..+.++.+. .|.||.+ +|+|+++++.. .+..|++++++ ++... .+..
T Consensus 46 ~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~-~~dL~~~ 124 (334)
T 2p9w_A 46 SHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVW-SVNFEKV 124 (334)
T ss_dssp CEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSE-EEESHHH
T ss_pred eEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEE-EecCccc
Confidence 44555555422 5789999 79999887643 26889999977 54311 1111
Q ss_pred ---------------------CCCCCeeEEEeecCCc-ceEEEEeCCCCeEEEee------cCCCCcceEEEccCCCEEE
Q 024436 74 ---------------------SPNRNHISVILSGDKT-GRLMKYDPATKQVTVLL------GNLSFPNGVALSEDGNYIL 125 (268)
Q Consensus 74 ---------------------~~~~~~~~~~~~~~~~-g~v~~~d~~~~~~~~~~------~~~~~pnGia~spdg~~ly 125 (268)
..+.-|+.+ ... +.|+++++++..+.... .....+|||++.|||+.|+
T Consensus 125 ~~~~~~~~g~~~~~~nDvavD~~GnaYVt~----s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Li 200 (334)
T 2p9w_A 125 QDEFEKKAGKRPFGVVQSAQDRDGNSYVAF----ALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLI 200 (334)
T ss_dssp HHHHHHHHSSCCEEEEEEEECTTSCEEEEE----EESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEE
T ss_pred cccccccccccccCCceeEECCCCCEEEeC----CCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEE
Confidence 111123332 234 78999999944344332 1234578999999999999
Q ss_pred EEecCCcEEEEEEccCCCCCceeEEE------eCCCCCCce-EEcCCCCE-EEEEecCC
Q 024436 126 LAETTSCRILRYWLKTSKAGTIEIVA------QLPGFPDNI-KRSPRGGF-WVGIHSRR 176 (268)
Q Consensus 126 va~~~~~~I~~~~~~~~~~g~~~~~~------~l~g~Pdgi-a~d~dG~l-~va~~~~~ 176 (268)
++++ .++|++|+++...... .... .+. .||+| +...+|++ +|+...+.
T Consensus 201 v~~~-~g~L~~fD~~~pv~~~-v~~~~~G~~~~~~-~~dgilp~~~~G~vllV~~~~~~ 256 (334)
T 2p9w_A 201 AFGG-PRALTAFDVSKPYAWP-EPVKINGDFGTLS-GTEKIVTVPVGNESVLVGARAPY 256 (334)
T ss_dssp EESS-SSSEEEEECSSSSCCC-EECEESSCCCCCT-TEEEEEEEEETTEEEEEEEETTE
T ss_pred EEcC-CCeEEEEcCCCCccee-ecccccCCccccc-CcccccccccCCEEEEEEcCCCC
Confidence 9998 9999999987321100 1111 122 58995 66778886 77776543
No 110
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.90 E-value=1e-06 Score=81.63 Aligned_cols=217 Identities=16% Similarity=0.183 Sum_probs=125.9
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
.....+++++|+|+.+++...++.|..|+.++.....+. ...+++.++. .....+.+..+|.....+.
T Consensus 303 ~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~---~~~~dg~v~~~~~~~~~~~ 379 (577)
T 2ymu_A 303 SSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIA---SASDDKTVKLWNRNGQLLQ 379 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEE---EEETTSEEEEEETTCCEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEE---EEeCCCEEEEEcCCCCEEE
Confidence 345789999999999999999999999988776433221 1123333332 2345677888887644455
Q ss_pred EeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCCCcceeee
Q 024436 104 VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLV 183 (268)
Q Consensus 104 ~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v 183 (268)
.+...-...++++|+|||++|. +....+.|..|+.++.. ...+.........+++.+|++++++....+. +
T Consensus 380 ~~~~~~~~v~~~~~s~dg~~l~-~~~~d~~v~~~~~~~~~---~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-----v 450 (577)
T 2ymu_A 380 TLTGHSSSVRGVAFSPDGQTIA-SASDDKTVKLWNRNGQL---LQTLTGHSSSVWGVAFSPDDQTIASASDDKT-----V 450 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEE-EEETTSEEEEECTTCCE---EEEEECCSSCEEEEEECTTSSEEEEEETTSE-----E
T ss_pred EecCCCCCeEEEEECCCCCEEE-EEeCCCEEEEEeCCCCE---EEEecCCCCCeEEEEECCCCCEEEEEcCCCE-----E
Confidence 5555555678999999998665 55567899999865421 2222222234567899999987776665543 4
Q ss_pred EeeCccceeeeeccccceeeeeec-cc-------cCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEE-eCCEEEEe
Q 024436 184 LSFPWIGNVLIKLPIDIVKIHSSL-VK-------LSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEE-KDGNLWIG 254 (268)
Q Consensus 184 ~~~~~~g~~l~~i~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~-~~g~Lyv~ 254 (268)
..+..+++.+..+......++++. .+ .... +.+...+.+|+.+..+....+ .++.+.. .++++.++
T Consensus 451 ~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d-~~i~iw~~~~~~~~~~~~h~~----~v~~l~~s~dg~~l~s 525 (577)
T 2ymu_A 451 KLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD-KTVKLWNRNGQLLQTLTGHSS----SVRGVAFSPDGQTIAS 525 (577)
T ss_dssp EEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETT-SEEEEEETTSCEEEEEECCSS----CEEEEEECTTSSCEEE
T ss_pred EEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC-CEEEEEcCCCCEEEEEeCCCC----CEEEEEEcCCCCEEEE
Confidence 445556666555433222222211 00 0111 223344455666666655432 2344443 35554444
Q ss_pred eCCCCeEEEEeC
Q 024436 255 SVNMPYAGLYNY 266 (268)
Q Consensus 255 s~~~~~v~~~~~ 266 (268)
...+..|.+.++
T Consensus 526 ~~~dg~v~lwd~ 537 (577)
T 2ymu_A 526 ASDDKTVKLWNR 537 (577)
T ss_dssp EETTSEEEEECT
T ss_pred EECcCEEEEEeC
Confidence 445556666553
No 111
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.90 E-value=6e-08 Score=84.31 Aligned_cols=137 Identities=16% Similarity=0.255 Sum_probs=89.9
Q ss_pred CCCcceEEECC-CCCEEEEEeC-----------------CCeEEEEeCCCCeEEEEEE---------cCCCCCeeEEEee
Q 024436 33 AIGPESLAFDA-LGEGPYTGVS-----------------DGRIIKWHQDQRRWLHFAR---------TSPNRNHISVILS 85 (268)
Q Consensus 33 ~~~P~gia~~~-dG~~l~~~~~-----------------~g~I~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~ 85 (268)
+..|+++++++ +|++|+++.. +++|+++++++.....+.. ..+++.++ ++.
T Consensus 125 ~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~l--yv~ 202 (322)
T 2fp8_A 125 FKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFV--LVA 202 (322)
T ss_dssp CSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEE--EEE
T ss_pred ccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEE--EEE
Confidence 45799999999 9998887643 3889999987543333221 12222222 223
Q ss_pred cCCcceEEEEeCCC---CeEEEeecCCCCcceEEEccCCCEEEEEecC----------CcEEEEEEccCCCCCceeEEEe
Q 024436 86 GDKTGRLMKYDPAT---KQVTVLLGNLSFPNGVALSEDGNYILLAETT----------SCRILRYWLKTSKAGTIEIVAQ 152 (268)
Q Consensus 86 ~~~~g~v~~~d~~~---~~~~~~~~~~~~pnGia~spdg~~lyva~~~----------~~~I~~~~~~~~~~g~~~~~~~ 152 (268)
+...++|++++.++ ++.+.+.. +..|+||+++++|+ |||++.. .++|++|+.++.. ...+..
T Consensus 203 d~~~~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~---~~~~~~ 277 (322)
T 2fp8_A 203 EFLSHQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNI---LEVIPL 277 (322)
T ss_dssp EGGGTEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCE---EEEEEC
T ss_pred eCCCCeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCE---EEEEEC
Confidence 34567899999874 23444433 22299999999996 9999876 5789999887521 223322
Q ss_pred CC----CCCCceEEcCCCCEEEEEecCCC
Q 024436 153 LP----GFPDNIKRSPRGGFWVGIHSRRK 177 (268)
Q Consensus 153 l~----g~Pdgia~d~dG~l~va~~~~~~ 177 (268)
-. ..|.+++. .+|+||++....+.
T Consensus 278 ~~g~~~~~~~~~~~-~~g~L~v~~~~~~~ 305 (322)
T 2fp8_A 278 PPPFAGEHFEQIQE-HDGLLYIGTLFHGS 305 (322)
T ss_dssp CTTTTTSCCCEEEE-ETTEEEEECSSCSE
T ss_pred CCCCccccceEEEE-eCCEEEEeecCCCc
Confidence 11 24777777 47899999877663
No 112
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.88 E-value=1.4e-07 Score=83.94 Aligned_cols=139 Identities=17% Similarity=0.216 Sum_probs=88.7
Q ss_pred CC-CCCcceEEECCCCCEEEEEe-------------CCCeEEEEeCCCC--eEEEEEEcC--CC----CCeeEEEee---
Q 024436 31 EG-AIGPESLAFDALGEGPYTGV-------------SDGRIIKWHQDQR--RWLHFARTS--PN----RNHISVILS--- 85 (268)
Q Consensus 31 ~~-~~~P~gia~~~dG~~l~~~~-------------~~g~I~~~~~~g~--~~~~~~~~~--~~----~~~~~~~~~--- 85 (268)
++ ..+||.++++|+|. +|+++ .+|+|++++++.. ....+...+ .+ +++..++..
T Consensus 46 ~~~~~G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 46 KGIDNGSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD 124 (355)
T ss_dssp TTCCSCCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT
T ss_pred CCCCCCcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC
Confidence 44 35899999999987 45554 6899999998732 233333222 11 222222211
Q ss_pred ----------c--CCcceEEEEeCCCCeEEEee----cCCCCcceEEEccCCCEEEEEec-----------------CCc
Q 024436 86 ----------G--DKTGRLMKYDPATKQVTVLL----GNLSFPNGVALSEDGNYILLAET-----------------TSC 132 (268)
Q Consensus 86 ----------~--~~~g~v~~~d~~~~~~~~~~----~~~~~pnGia~spdg~~lyva~~-----------------~~~ 132 (268)
. .....+++++++++..+.+. ..+..||+++++++| .+|+++. ..+
T Consensus 125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHHHHHHHHHTTCCCE
T ss_pred CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCC-CEEecCCcEeCCcccccchhhccCCcc
Confidence 1 12234777777644433321 347789999999999 5999875 246
Q ss_pred EEEEEEccCCCCCceeEEEe-CCCCCCceEEcCCCC-EEEEEecCCC
Q 024436 133 RILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGG-FWVGIHSRRK 177 (268)
Q Consensus 133 ~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~dG~-l~va~~~~~~ 177 (268)
+|++|+.. +.+.+.+ +. .|+||++++||+ +|+++...+.
T Consensus 204 ~vyr~d~~-----~~~~~~~~l~-~pNGia~spDg~~lYvadt~~~~ 244 (355)
T 3sre_A 204 FVTYYSPN-----DVRVVAEGFD-FANGINISPDGKYVYIAELLAHK 244 (355)
T ss_dssp EEEEECTT-----CCEEEEEEES-SEEEEEECTTSSEEEEEEGGGTE
T ss_pred EEEEEECC-----eEEEeecCCc-ccCcceECCCCCEEEEEeCCCCe
Confidence 88888762 2344433 43 799999999995 8999987763
No 113
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.86 E-value=9.8e-07 Score=79.60 Aligned_cols=134 Identities=13% Similarity=0.060 Sum_probs=87.6
Q ss_pred CcceEEECCCCCEEEEEeCC---CeEEEEeCCCCeEEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCCeE
Q 024436 35 GPESLAFDALGEGPYTGVSD---GRIIKWHQDQRRWLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~---g~I~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
...+++++|||+.+++...+ ..|+.++..+.....+. ..+|++.++...........|+.+|.++++.
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI 259 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE
Confidence 46778999999987776655 48988987543322222 1234444443222334456799999988888
Q ss_pred EEeecCCCCcceEEEccCCCEEEEEecCC--cEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEE
Q 024436 103 TVLLGNLSFPNGVALSEDGNYILLAETTS--CRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVG 171 (268)
Q Consensus 103 ~~~~~~~~~pnGia~spdg~~lyva~~~~--~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va 171 (268)
+.+.........++|+|||++|+++.... .+|++++++++. ...+.........+++++||+.++.
T Consensus 260 ~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~ 327 (415)
T 2hqs_A 260 RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVM 327 (415)
T ss_dssp EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEE
T ss_pred EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEE
Confidence 77766555678899999999888775433 389999987633 2222111223457899999985443
No 114
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.82 E-value=1.8e-07 Score=82.93 Aligned_cols=64 Identities=20% Similarity=0.270 Sum_probs=48.5
Q ss_pred CCcceEEEccCCCEEEEEecCCcEEEEEEccCCC----CCceeEEEeCCCCCCceEEcCCCCEEEEEecC
Q 024436 110 SFPNGVALSEDGNYILLAETTSCRILRYWLKTSK----AGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 110 ~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~----~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~ 175 (268)
..|.|++|. +| .+||++...++|+++++++.. .+..+.+....+.|.++++++||.||++.+..
T Consensus 268 ~ap~G~~~~-~G-~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~~ 335 (352)
T 2ism_A 268 FPPGNLAFF-RG-DLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSNR 335 (352)
T ss_dssp CCEEEEEEE-TT-EEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECST
T ss_pred CCCcceEEE-CC-EEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeCC
Confidence 468899994 66 599999999999999987432 11123333323689999999999999999864
No 115
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.81 E-value=4.6e-07 Score=82.54 Aligned_cols=147 Identities=14% Similarity=0.160 Sum_probs=90.9
Q ss_pred CEEEEecCCC--CCcceEEECCCCCEEEEEe-------------------CCCeEEEEeCCCCeEEEEEEc---------
Q 024436 24 GVVQYQIEGA--IGPESLAFDALGEGPYTGV-------------------SDGRIIKWHQDQRRWLHFART--------- 73 (268)
Q Consensus 24 ~~~~i~~~~~--~~P~gia~~~dG~~l~~~~-------------------~~g~I~~~~~~g~~~~~~~~~--------- 73 (268)
-+.+++++.. ..++.+.+.|+++.+|++. ..++|..++.+..........
T Consensus 176 v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~ 255 (462)
T 2ece_A 176 PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALE 255 (462)
T ss_dssp EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEE
T ss_pred EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccce
Confidence 3455555532 2355577899999888873 368999998765433322222
Q ss_pred -----CCCCCeeEEEee---cCCcceEEEEeCCCCeEEEee-----c-----C-----------CCCcceEEEccCCCEE
Q 024436 74 -----SPNRNHISVILS---GDKTGRLMKYDPATKQVTVLL-----G-----N-----------LSFPNGVALSEDGNYI 124 (268)
Q Consensus 74 -----~~~~~~~~~~~~---~~~~g~v~~~d~~~~~~~~~~-----~-----~-----------~~~pnGia~spdg~~l 124 (268)
.+++.+++...+ ..-.+.|+++..+.|+.+... . . ...|.+|.+|+||++|
T Consensus 256 i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfL 335 (462)
T 2ece_A 256 LRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFL 335 (462)
T ss_dssp EEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEE
T ss_pred eEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEE
Confidence 334445444433 112345544333324332211 0 0 2568999999999999
Q ss_pred EEEecCCcEEEEEEccCCCCCceeEEEe--C---------------CCCCCceEEcCCCC-EEEEE
Q 024436 125 LLAETTSCRILRYWLKTSKAGTIEIVAQ--L---------------PGFPDNIKRSPRGG-FWVGI 172 (268)
Q Consensus 125 yva~~~~~~I~~~~~~~~~~g~~~~~~~--l---------------~g~Pdgia~d~dG~-l~va~ 172 (268)
||+++..+.|.+|+++... +.+.... . .+.|+++++++||+ |||+.
T Consensus 336 YVSnrg~d~VavfdV~d~~--~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 336 YLSLWGIGEVRQYDISNPF--KPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEETTTTEEEEEECSSTT--SCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEeCCCCEEEEEEecCCC--CcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999999999986321 2222222 1 23599999999996 78877
No 116
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.80 E-value=2e-06 Score=77.12 Aligned_cols=145 Identities=11% Similarity=0.060 Sum_probs=86.5
Q ss_pred CEEEEecCC------CCCcceEEECCCCCEEEEEeC--CCeEEEEeCCCCeEEEEEEcCC--------CCCeeEEEeecC
Q 024436 24 GVVQYQIEG------AIGPESLAFDALGEGPYTGVS--DGRIIKWHQDQRRWLHFARTSP--------NRNHISVILSGD 87 (268)
Q Consensus 24 ~~~~i~~~~------~~~P~gia~~~dG~~l~~~~~--~g~I~~~~~~g~~~~~~~~~~~--------~~~~~~~~~~~~ 87 (268)
-+.+|+++. ...|++++++|||+.+|+.+. ++.|..||.....+.......+ .+.|+ ...
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~----~~~ 196 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFF----MHC 196 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEE----EEE
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeE----EEC
Confidence 456677764 247999999999999998763 6899999987654333222211 11122 223
Q ss_pred CcceEEEEeCCC-CeEEEeecC------CCCcceEEEc-cCCCEEEEEecCCcEEEEEEccCCCCC---ceeEEEe--C-
Q 024436 88 KTGRLMKYDPAT-KQVTVLLGN------LSFPNGVALS-EDGNYILLAETTSCRILRYWLKTSKAG---TIEIVAQ--L- 153 (268)
Q Consensus 88 ~~g~v~~~d~~~-~~~~~~~~~------~~~pnGia~s-pdg~~lyva~~~~~~I~~~~~~~~~~g---~~~~~~~--l- 153 (268)
++|++..++.++ +++...... ....+..+|+ +||+.+|+++ .++|++++..+.... ...++.. .
T Consensus 197 ~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 197 RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp TTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred CCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcceeecceecccccccc
Confidence 567888888865 555221111 1122335664 7887777766 578999998754311 1111111 0
Q ss_pred CC-CCC---ceEEcCCC-CEEEEEec
Q 024436 154 PG-FPD---NIKRSPRG-GFWVGIHS 174 (268)
Q Consensus 154 ~g-~Pd---gia~d~dG-~l~va~~~ 174 (268)
++ .|. .+++++++ ++||+...
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~ 300 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQ 300 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred ccccCCCcceeeECCCCCeEEEEecc
Confidence 11 243 48899887 48998763
No 117
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.79 E-value=1.2e-07 Score=84.66 Aligned_cols=79 Identities=10% Similarity=-0.018 Sum_probs=58.6
Q ss_pred Ccce---EEEccCCCEEEEEec-C-------CcEEEEEEccCCCCCceeEEEeC--CCCCCceEEcCCCC-EEEEEe-cC
Q 024436 111 FPNG---VALSEDGNYILLAET-T-------SCRILRYWLKTSKAGTIEIVAQL--PGFPDNIKRSPRGG-FWVGIH-SR 175 (268)
Q Consensus 111 ~pnG---ia~spdg~~lyva~~-~-------~~~I~~~~~~~~~~g~~~~~~~l--~g~Pdgia~d~dG~-l~va~~-~~ 175 (268)
.|.| ++++|||+++||+.. . .+.+.++|++. .+++..+ ++.|+||++++||+ +|+++. ..
T Consensus 262 ~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-----~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~ 336 (368)
T 1mda_H 262 RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-----GQTSGPISNGHDSDAIIAAQDGASDNYANSAGT 336 (368)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-----CCEEECCEEEEEECEEEECCSSSCEEEEEETTT
T ss_pred ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC-----CeEEEEEECCCCcceEEECCCCCEEEEEccCCC
Confidence 4566 999999999999865 3 35677999874 2334443 34699999999996 899998 45
Q ss_pred CCcceeeeEee-Cccceeeeecccc
Q 024436 176 RKGISKLVLSF-PWIGNVLIKLPID 199 (268)
Q Consensus 176 ~~~~~~~v~~~-~~~g~~l~~i~~~ 199 (268)
+. |..+ ..+++++..|+.+
T Consensus 337 ~~-----VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 337 EV-----LDIYDAASDQDQSSVELD 356 (368)
T ss_dssp TE-----EEEEESSSCEEEEECCCC
T ss_pred Ce-----EEEEECCCCcEEEEEECC
Confidence 53 4444 5789999999876
No 118
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.77 E-value=9.6e-07 Score=74.88 Aligned_cols=149 Identities=10% Similarity=0.079 Sum_probs=95.7
Q ss_pred CCCEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEe--CCCCeE-EEEEEc-----CCCC-----------CeeEE
Q 024436 22 TQGVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWH--QDQRRW-LHFART-----SPNR-----------NHISV 82 (268)
Q Consensus 22 ~~~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~--~~g~~~-~~~~~~-----~~~~-----------~~~~~ 82 (268)
.+-++.+++++...+|||++.++|.++++.-.+++++.++ .++..+ ...... .++. +.+..
T Consensus 58 g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v 137 (255)
T 3qqz_A 58 GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF 137 (255)
T ss_dssp CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE
T ss_pred CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEE
Confidence 3456677788777899999999998666666678888775 344311 111111 0111 11222
Q ss_pred EeecCCcceEEEEeC--CCCeEEEeec-------CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC
Q 024436 83 ILSGDKTGRLMKYDP--ATKQVTVLLG-------NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL 153 (268)
Q Consensus 83 ~~~~~~~g~v~~~d~--~~~~~~~~~~-------~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l 153 (268)
. .......||.++. .+..++.... .+.-+.+|+++|.-++||+....+++|..+|.+|. ...+..|
T Consensus 138 a-~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~----~~~~~~L 212 (255)
T 3qqz_A 138 F-KEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE----VIGEMSL 212 (255)
T ss_dssp E-EESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEEC
T ss_pred E-ECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC----EEEEEEc
Confidence 1 2233447888872 2222333211 23457899999999999999999999999998763 2333333
Q ss_pred C-C---------CCCceEEcCCCCEEEEEecC
Q 024436 154 P-G---------FPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 154 ~-g---------~Pdgia~d~dG~l~va~~~~ 175 (268)
. | .|.||++|++|+|||++-.+
T Consensus 213 ~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 213 TKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp STTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred CCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 2 1 68999999999999997665
No 119
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.73 E-value=6.5e-07 Score=79.28 Aligned_cols=90 Identities=21% Similarity=0.240 Sum_probs=63.7
Q ss_pred CCcceEEEEeCCCCeEEEe-------ecCCCCcceEEEccC---CCEEEEEec--CCcEEEEEEccCC-----CCCceeE
Q 024436 87 DKTGRLMKYDPATKQVTVL-------LGNLSFPNGVALSED---GNYILLAET--TSCRILRYWLKTS-----KAGTIEI 149 (268)
Q Consensus 87 ~~~g~v~~~d~~~~~~~~~-------~~~~~~pnGia~spd---g~~lyva~~--~~~~I~~~~~~~~-----~~g~~~~ 149 (268)
...|+|+++++++++.+.+ ..+...++||+++|| +++|||+.+ ..++|.||++++. .+...++
T Consensus 50 r~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~ 129 (347)
T 3das_A 50 RDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDT 129 (347)
T ss_dssp TTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEE
T ss_pred ecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEE
Confidence 4579999999876665433 234567899999996 457999754 5679999998762 3334444
Q ss_pred E-EeCCC----CCCceEEcCCCCEEEEEecCC
Q 024436 150 V-AQLPG----FPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 150 ~-~~l~g----~Pdgia~d~dG~l~va~~~~~ 176 (268)
+ ..+|. .+..|++++||+||++.....
T Consensus 130 i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~ 161 (347)
T 3das_A 130 VFRGIPKGVIHNGGRIAFGPDKMLYAGTGESG 161 (347)
T ss_dssp EEEEECCCSSCCCCCEEECTTSCEEEECBCTT
T ss_pred EEEcCCCCCCccCccccCCCCCCEEEEECCCC
Confidence 3 33442 456799999999999986543
No 120
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.70 E-value=2.8e-05 Score=66.18 Aligned_cols=136 Identities=12% Similarity=0.082 Sum_probs=90.3
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeE---EEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCe
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRW---LHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQ 101 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~---~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 101 (268)
....+++++|+|+.++++..++.|..++.+.... ..+.. ..++++++. ....++.|..+|..+++
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~---~~~~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF---SCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEE---EEETTSCEEEEETTTTE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEE---EEeCCCcEEEEeCCCCc
Confidence 4578899999999999999999999998765421 11111 122222222 23456789999988776
Q ss_pred EEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 102 VTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 102 ~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
..... ........++++||++.|+++ +..+.|..|++..+. .......++.+..++++++|+++++....+
T Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~ 246 (337)
T 1gxr_A 175 LVRQFQGHTDGASCIDISNDGTKLWTG-GLDNTVRSWDLREGR---QLQQHDFTSQIFSLGYCPTGEWLAVGMESS 246 (337)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTE---EEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeeecccCceEEEEECCCCCEEEEE-ecCCcEEEEECCCCc---eEeeecCCCceEEEEECCCCCEEEEEcCCC
Confidence 55444 344567899999999866654 567899999987532 111122344577899999998766665544
No 121
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.69 E-value=3.8e-05 Score=65.48 Aligned_cols=140 Identities=15% Similarity=0.138 Sum_probs=90.2
Q ss_pred CCCCCcceEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCC
Q 024436 31 EGAIGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 31 ~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
+......+++++|+|++++++..++.|..|+.. ++....+. ...++.+++. ....++.|..+|.+++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~---s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV---SASDDKTLKIWDVSSG 97 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE---EEETTSEEEEEETTTC
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEE---EECCCCEEEEEECCCC
Confidence 334567899999999999999999999999864 33222221 1123333322 3345678888888776
Q ss_pred eEE-EeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 101 QVT-VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 101 ~~~-~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
+.. .+.......+.++|+|+++.| ++....+.|..|++..+. ....+..-......++++++|+++++....+
T Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 98 KCLKTLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCE--EEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 644 344444556789999999855 455677899999987432 1122211122345789999998776665554
No 122
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.68 E-value=1.2e-06 Score=75.57 Aligned_cols=77 Identities=19% Similarity=0.137 Sum_probs=50.5
Q ss_pred CcceEEEcc-CCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-EEEEEecCCCcceeeeEee-C
Q 024436 111 FPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRRKGISKLVLSF-P 187 (268)
Q Consensus 111 ~pnGia~sp-dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l~va~~~~~~~~~~~v~~~-~ 187 (268)
.+.+++++| ||++||++ .++|++|+++.++ .......+..|.++++++||+ ||++. ..+ . |..+ .
T Consensus 256 ~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~-~----v~v~d~ 323 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRK---LIKAANLDHTYYCVAFDKKGDKLYLGG-TFN-D----LAVFNP 323 (349)
T ss_dssp CEEEEEECSSCTTEEEEE---ESEEEEEETTTTE---EEEEEECSSCCCEEEECSSSSCEEEES-BSS-E----EEEEET
T ss_pred cceeeEecCCCCCEEEEE---cCeEEEEECccCe---EEEEEcCCCCccceEECCCCCEEEEec-CCC-e----EEEEec
Confidence 355677779 99999998 5799999987522 212222445689999999985 77753 222 2 3333 3
Q ss_pred ccceeeeecccc
Q 024436 188 WIGNVLIKLPID 199 (268)
Q Consensus 188 ~~g~~l~~i~~~ 199 (268)
.+++.+..++.+
T Consensus 324 ~~~~~~~~~~~~ 335 (349)
T 1jmx_B 324 DTLEKVKNIKLP 335 (349)
T ss_dssp TTTEEEEEEECS
T ss_pred cccceeeeeecC
Confidence 456667666654
No 123
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.67 E-value=7.7e-06 Score=68.10 Aligned_cols=134 Identities=11% Similarity=0.028 Sum_probs=84.4
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEE-----------cCCCCCeeEEEee-cCCcceEEEEeCCCCe
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFAR-----------TSPNRNHISVILS-GDKTGRLMKYDPATKQ 101 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~~-----------~~~~~~~~~~~~~-~~~~g~v~~~d~~~~~ 101 (268)
...+++++|||+.+++.. ++.|+.++.++ ........ .++++.++..... ......|+.++.++++
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~ 121 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT 121 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc
Confidence 678999999999877765 78999998765 32222211 1233333332211 2246789999988776
Q ss_pred EEEeecCCCCcceEEEccCCCEEEEEecCCc--EEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-EEEEEe
Q 024436 102 VTVLLGNLSFPNGVALSEDGNYILLAETTSC--RILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIH 173 (268)
Q Consensus 102 ~~~~~~~~~~pnGia~spdg~~lyva~~~~~--~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l~va~~ 173 (268)
.+.+... ...+.++|+|||+.|+++....+ +|+.++.+++ ....+...++.+..++++++|+ ++++..
T Consensus 122 ~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 122 PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG---VETRLTHGEGRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC---CEEECCCSSSCEEEEEECTTSSEEEEEEC
T ss_pred eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC---cceEcccCCCccccceECCCCCEEEEEec
Confidence 6655433 34788999999998887665556 4555555432 2222222334567899999998 444443
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.64 E-value=2.5e-06 Score=76.90 Aligned_cols=137 Identities=10% Similarity=0.083 Sum_probs=88.1
Q ss_pred CcceEEECCCCCEEE-EEeCC--CeEEEEeCCCCeEEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCCeE
Q 024436 35 GPESLAFDALGEGPY-TGVSD--GRIIKWHQDQRRWLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 35 ~P~gia~~~dG~~l~-~~~~~--g~I~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
...+++++|||+.++ +...+ ..|+.++.++.....+. ..+|++.++...........|+.+|.++++.
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~ 303 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP 303 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE
Confidence 567899999999666 55444 45998987654322211 1234444443222223344899999988877
Q ss_pred EEeecCCCCcceEEEccCCCEEEEEecC--CcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCE-EEEEecC
Q 024436 103 TVLLGNLSFPNGVALSEDGNYILLAETT--SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGF-WVGIHSR 175 (268)
Q Consensus 103 ~~~~~~~~~pnGia~spdg~~lyva~~~--~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l-~va~~~~ 175 (268)
+.+.........++|+|||++|+++... ...|++|+++++. ...+... .....+++.|||+. +.+....
T Consensus 304 ~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~---~~~l~~~-~~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 304 QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG---VQVLSST-FLDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC---EEECCCS-SSCEEEEECTTSSEEEEEEEET
T ss_pred EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC---EEEecCC-CCcCCeEEcCCCCEEEEEEcCC
Confidence 6665554566789999999999887764 4689999987532 2222221 24678899999984 4444433
No 125
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.60 E-value=8.9e-07 Score=78.52 Aligned_cols=64 Identities=9% Similarity=0.124 Sum_probs=47.0
Q ss_pred CCcceEEEcc-------CCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eCCCCCCceEEcCCCCEEEEEec
Q 024436 110 SFPNGVALSE-------DGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPGFPDNIKRSPRGGFWVGIHS 174 (268)
Q Consensus 110 ~~pnGia~sp-------dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l~g~Pdgia~d~dG~l~va~~~ 174 (268)
..|.|++|.+ +| .+||++...++|++++++++.....+.+. ...+.|.++++++||.||++...
T Consensus 271 ~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~ 342 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDE 342 (353)
T ss_dssp CCEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECS
T ss_pred cCcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeC
Confidence 3688999975 45 69999999999999999853211112222 22357999999999999998653
No 126
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.60 E-value=5.3e-05 Score=65.55 Aligned_cols=146 Identities=16% Similarity=0.185 Sum_probs=94.4
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCC-eEEEEE---------EcCCCCCeeEEEeecCCcceEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR-RWLHFA---------RTSPNRNHISVILSGDKTGRLM 93 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~-~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~ 93 (268)
.+..+..+. .....++++|+|+.++++..++.|..++.... ....+. ..++++.++. .+..++.|.
T Consensus 114 ~~~~~~~~~-~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la---sg~~dg~i~ 189 (321)
T 3ow8_A 114 QIKSIDAGP-VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA---SGAIDGIIN 189 (321)
T ss_dssp EEEEEECCT-TCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEE---EEETTSCEE
T ss_pred EEEEEeCCC-ccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEE---EEcCCCeEE
Confidence 445554442 35678999999999999999999998886532 211111 1233444332 334567888
Q ss_pred EEeCCCCeEEEeecC-CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEE
Q 024436 94 KYDPATKQVTVLLGN-LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGI 172 (268)
Q Consensus 94 ~~d~~~~~~~~~~~~-~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~ 172 (268)
.+|..+++......+ ....+.++|+||+++| ++.+..+.|..|++..... ...+..-.+....+++.|+|+++++.
T Consensus 190 iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l-~s~s~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~sp~~~~l~s~ 266 (321)
T 3ow8_A 190 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL-VTASDDGYIKIYDVQHANL--AGTLSGHASWVLNVAFCPDDTHFVSS 266 (321)
T ss_dssp EEETTTTEEEEEECCCSSCCCEEEECTTSCEE-EEECTTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEECCCCcEEEEEcccCCceeEEEEcCCCCEE-EEEcCCCeEEEEECCCcce--eEEEcCCCCceEEEEECCCCCEEEEE
Confidence 999887776544443 3445899999999855 5666788999999874321 12221112345678999999877766
Q ss_pred ecCC
Q 024436 173 HSRR 176 (268)
Q Consensus 173 ~~~~ 176 (268)
...+
T Consensus 267 s~D~ 270 (321)
T 3ow8_A 267 SSDK 270 (321)
T ss_dssp ETTS
T ss_pred eCCC
Confidence 6554
No 127
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.59 E-value=4.6e-06 Score=70.72 Aligned_cols=141 Identities=18% Similarity=0.152 Sum_probs=89.4
Q ss_pred CCEEEEecCCCCCcceEEECCCCCEEEE-EeCCCeEEEEeCCC-CeEEEEEEcC------CCCCeeEEEeecCCcceEEE
Q 024436 23 QGVVQYQIEGAIGPESLAFDALGEGPYT-GVSDGRIIKWHQDQ-RRWLHFARTS------PNRNHISVILSGDKTGRLMK 94 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~~~dG~~l~~-~~~~g~I~~~~~~g-~~~~~~~~~~------~~~~~~~~~~~~~~~g~v~~ 94 (268)
+-++.++++.-...+|++++ |+.+|. ...+++++.+|++. +....+.... .++..+ +.+ +..++|+.
T Consensus 76 kv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L--~~S-dGs~~i~~ 150 (262)
T 3nol_A 76 KTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYL--IMS-DGTPVLRF 150 (262)
T ss_dssp CEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEEECSSCE--EEC-CSSSEEEE
T ss_pred cEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEecCCCEE--EEE-CCCCeEEE
Confidence 34566777753334667765 444555 45689999999864 3333333211 111111 223 34688999
Q ss_pred EeCCCCeEEEee------cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC-------------C
Q 024436 95 YDPATKQVTVLL------GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP-------------G 155 (268)
Q Consensus 95 ~d~~~~~~~~~~------~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~-------------g 155 (268)
+||++.++..-. ..+..+|.+.+. || .||++...++.|.++|++.++ .....+++ .
T Consensus 151 iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~---V~~~Id~~~L~~~~~~~~~~~~ 225 (262)
T 3nol_A 151 LDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANVWQTNKIVRIDPETGK---VTGIIDLNGILAEAGPLPSPID 225 (262)
T ss_dssp ECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCB---EEEEEECTTGGGGSCSCCSSCC
T ss_pred EcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEEccCCeEEEEECCCCc---EEEEEECCcCccccccccCcCC
Confidence 999987654321 134667889987 77 699999999999999987543 22222221 2
Q ss_pred CCCceEEcCCC-CEEEEEe
Q 024436 156 FPDNIKRSPRG-GFWVGIH 173 (268)
Q Consensus 156 ~Pdgia~d~dG-~l~va~~ 173 (268)
.|+|||+|+++ +|||+.-
T Consensus 226 vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 226 VLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CEEEEEEETTTTEEEEEET
T ss_pred ceEEEEEcCCCCEEEEECC
Confidence 68999999987 5888774
No 128
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.59 E-value=5.3e-05 Score=65.23 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=91.3
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
....+++++|+|++++++..+|.|..|+.. ++....+. ...+++.++. ....++.|..+|..+++..
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~---s~~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCV---TGSADYSIKLWDVSNGQCV 109 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE---EEETTTEEEEEETTTCCEE
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEE---EEeCCCeEEEEECCCCcEE
Confidence 468899999999999999999999999864 33322221 1123333332 3345688999998877766
Q ss_pred EeecCCCCcceEEEccCCCEEEEEecCC-----cEEEEEEccCCCC-Ccee--------EEEeCCC--CCCceEEcCCCC
Q 024436 104 VLLGNLSFPNGVALSEDGNYILLAETTS-----CRILRYWLKTSKA-GTIE--------IVAQLPG--FPDNIKRSPRGG 167 (268)
Q Consensus 104 ~~~~~~~~pnGia~spdg~~lyva~~~~-----~~I~~~~~~~~~~-g~~~--------~~~~l~g--~Pdgia~d~dG~ 167 (268)
...........++|+|+++.|+++. .. +.|..|++..... .... .+....+ ....++++++|+
T Consensus 110 ~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 110 ATWKSPVPVKRVEFSPCGNYFLAIL-DNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEE-CCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred EEeecCCCeEEEEEccCCCEEEEec-CCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 5555556678999999999776654 44 7899999874321 1111 1111112 466788999998
Q ss_pred EEEEEecCC
Q 024436 168 FWVGIHSRR 176 (268)
Q Consensus 168 l~va~~~~~ 176 (268)
++++....+
T Consensus 189 ~l~~~~~dg 197 (369)
T 3zwl_B 189 YIIAGHKDG 197 (369)
T ss_dssp EEEEEETTS
T ss_pred EEEEEcCCC
Confidence 666655544
No 129
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.57 E-value=3.5e-05 Score=67.60 Aligned_cols=141 Identities=12% Similarity=0.096 Sum_probs=94.8
Q ss_pred CCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEc------------CCCCCeeEEEeecCCcceEEEEeCCC
Q 024436 33 AIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFART------------SPNRNHISVILSGDKTGRLMKYDPAT 99 (268)
Q Consensus 33 ~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~------------~~~~~~~~~~~~~~~~g~v~~~d~~~ 99 (268)
.....++++.| +++.++++..++.|..|+..+.....+... .++..++ .....++.|..+|...
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~d~~i~i~d~~~ 194 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQML---ATGDSTGRLLLLGLDG 194 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEE---EEEETTSEEEEEETTS
T ss_pred CCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEE---EEECCCCCEEEEECCC
Confidence 34678999999 788899999999999999887644333221 1222222 2334568888898875
Q ss_pred CeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCC-CceeEEEeCCCCCCceEEcC-CCCEEEEEecCC
Q 024436 100 KQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKA-GTIEIVAQLPGFPDNIKRSP-RGGFWVGIHSRR 176 (268)
Q Consensus 100 ~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~-g~~~~~~~l~g~Pdgia~d~-dG~l~va~~~~~ 176 (268)
..+..+.......+.++|+|+++.++++.+..+.|..|++..... +.........+....+++++ +|+++++....+
T Consensus 195 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~ 273 (383)
T 3ei3_B 195 HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRN 273 (383)
T ss_dssp CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSS
T ss_pred CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCC
Confidence 555566656667889999999984556667789999999974221 11211112234577899999 998766665544
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.57 E-value=5.2e-05 Score=72.63 Aligned_cols=133 Identities=12% Similarity=0.054 Sum_probs=87.3
Q ss_pred CCcceEEECCCCCEEEEEeC-CC-----eEEEEeCCCCeEEEEEE----------------------------------c
Q 024436 34 IGPESLAFDALGEGPYTGVS-DG-----RIIKWHQDQRRWLHFAR----------------------------------T 73 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~-~g-----~I~~~~~~g~~~~~~~~----------------------------------~ 73 (268)
..+..++++|||+.+++... ++ .|+.++.++........ .
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 35889999999998887776 77 89999976543222211 1
Q ss_pred CCCCCeeEEEeecCCcceEEEEeCCCC---eEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEE
Q 024436 74 SPNRNHISVILSGDKTGRLMKYDPATK---QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIV 150 (268)
Q Consensus 74 ~~~~~~~~~~~~~~~~g~v~~~d~~~~---~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~ 150 (268)
+|++.++... . .+.|+.+|.+++ +.+.+.......+.++|||||++|+++. .+.|+.|+++++. ...+
T Consensus 117 SpDg~~l~~~-~---~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~---~~~~ 187 (741)
T 2ecf_A 117 SPDAQRLLFP-L---GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGR---QMQL 187 (741)
T ss_dssp CTTSSEEEEE-E---TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTE---EEEC
T ss_pred CCCCCEEEEE-e---CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe--CCcEEEEecCCCC---EEEe
Confidence 2333333211 1 178999999877 6666665556678999999999887765 3589999987532 2211
Q ss_pred EeCCC-----------------CCCceEEcCCCC-EEEEEecC
Q 024436 151 AQLPG-----------------FPDNIKRSPRGG-FWVGIHSR 175 (268)
Q Consensus 151 ~~l~g-----------------~Pdgia~d~dG~-l~va~~~~ 175 (268)
..... .+.+++++|||+ |+++....
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 11111 157899999997 66655443
No 131
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.56 E-value=4e-05 Score=66.39 Aligned_cols=139 Identities=6% Similarity=-0.010 Sum_probs=87.0
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe---EEEEEEc---------CCCCCeeEEEeecCCcceEEEEeCCCCe
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR---WLHFART---------SPNRNHISVILSGDKTGRLMKYDPATKQ 101 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~---~~~~~~~---------~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 101 (268)
....+++++|+|++++++..++.|..++.++.. ...+... .++..++. ....++.|..+|..+++
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~---~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV---TCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEE---EEETTSCEEEEEEETTE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEE---EEcCCCeEEEEECCCCe
Confidence 357899999999999998889999999876542 2222111 12223322 22345667777766665
Q ss_pred EEEe---ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCc-eeEEEe-CCCCCCceEEcCCCCEEEEEecCC
Q 024436 102 VTVL---LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT-IEIVAQ-LPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 102 ~~~~---~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~-~~~~~~-l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
.... .......+.++|+||++.|+++. ..+.|..|+++...... ...+.. .......+++.++|+++++....+
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 4332 33445578999999998776554 66888888887532100 111111 123467899999998776665544
No 132
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.55 E-value=2.1e-05 Score=67.41 Aligned_cols=197 Identities=14% Similarity=0.098 Sum_probs=114.8
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCC-C-Cee---EEEeecCCcceEEEEeCCCCeEE-EeecCCCCc
Q 024436 39 LAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPN-R-NHI---SVILSGDKTGRLMKYDPATKQVT-VLLGNLSFP 112 (268)
Q Consensus 39 ia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~-~-~~~---~~~~~~~~~g~v~~~d~~~~~~~-~~~~~~~~p 112 (268)
.++. +|. ++++..++.|++++++|+.........+. . ... ..+......+.|+++|++ ++.. .........
T Consensus 103 ~~~~-~~~-l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~ 179 (330)
T 3hxj_A 103 FTIF-EDI-LYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAIT 179 (330)
T ss_dssp EEEE-TTE-EEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCC
T ss_pred ceEE-CCE-EEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCce
Confidence 3444 555 77777789999999886532222111110 0 000 011122345789999998 6543 233233455
Q ss_pred ceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eC-CCCCCceEEcCCCCEEEEEecCCCcceeeeEeeCccc
Q 024436 113 NGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QL-PGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPWIG 190 (268)
Q Consensus 113 nGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l-~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~~~g 190 (268)
..++++++|+ ||++. +.|++++.++. ..+. .. ......+++|++|++|++...++ +.++.+++
T Consensus 180 ~~~~~d~~g~-l~v~t---~~l~~~d~~g~-----~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~g------l~~~~~~g 244 (330)
T 3hxj_A 180 SAASIGKDGT-IYFGS---DKVYAINPDGT-----EKWNFYAGYWTVTRPAISEDGTIYVTSLDGH------LYAINPDG 244 (330)
T ss_dssp SCCEECTTCC-EEEES---SSEEEECTTSC-----EEEEECCSSCCCSCCEECTTSCEEEEETTTE------EEEECTTS
T ss_pred eeeEEcCCCE-EEEEe---CEEEEECCCCc-----EEEEEccCCcceeceEECCCCeEEEEcCCCe------EEEECCCC
Confidence 6788888885 88886 78999984331 1221 12 23577899999999999987554 55566677
Q ss_pred eeeeeccccceeeee--------eccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEE-eCCEEEEeeCCCC
Q 024436 191 NVLIKLPIDIVKIHS--------SLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEE-KDGNLWIGSVNMP 259 (268)
Q Consensus 191 ~~l~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~-~~g~Lyv~s~~~~ 259 (268)
+.+...+.+...... ++- .+.. +-+.+++++|+.+..+..+. .. +..+.. .+|+||+++..+-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~-ggl~~~d~~g~~~~~~~~~~-~~---~~~~~~d~~g~l~~gt~~G~ 316 (330)
T 3hxj_A 245 TEKWRFKTGKRIESSPVIGNTDTIYF-GSYD-GHLYAINPDGTEKWNFETGS-WI---IATPVIDENGTIYFGTRNGK 316 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTSCEEE-ECTT-CEEEEECTTSCEEEEEECSS-CC---CSCCEECTTCCEEEECTTSC
T ss_pred CEeEEeeCCCCccccceEcCCCeEEE-ecCC-CCEEEECCCCcEEEEEEcCC-cc---ccceEEcCCCEEEEEcCCCe
Confidence 766555433111110 111 1222 45778888888887776542 11 223333 7899999887653
No 133
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.55 E-value=1.1e-05 Score=75.87 Aligned_cols=139 Identities=9% Similarity=0.068 Sum_probs=84.6
Q ss_pred EEECC-----CCCEEEEEe-CCCeEEEEeCCCCeEEEE------------EEcC-CCCCeeEEEe---------------
Q 024436 39 LAFDA-----LGEGPYTGV-SDGRIIKWHQDQRRWLHF------------ARTS-PNRNHISVIL--------------- 84 (268)
Q Consensus 39 ia~~~-----dG~~l~~~~-~~g~I~~~~~~g~~~~~~------------~~~~-~~~~~~~~~~--------------- 84 (268)
++++. ||+.+|+.. .+++|.+|+.+....... +... |+..|+....
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~ 169 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 169 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence 77777 888888755 478999999876432221 1112 3333433221
Q ss_pred ecCCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCC--------------cEEEEEEccC-------CC
Q 024436 85 SGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTS--------------CRILRYWLKT-------SK 143 (268)
Q Consensus 85 ~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~--------------~~I~~~~~~~-------~~ 143 (268)
.....+.+..+|.++.++.....-...|.+++++|||+++|++...+ ..|.++++.. ++
T Consensus 170 ~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk 249 (595)
T 1fwx_A 170 VANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 249 (595)
T ss_dssp GGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred ccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence 01234578899999877654332222799999999999999999776 3455544321 00
Q ss_pred ---CCce----------eE-EEe--CCCCCCceEEcCCCC-EEEEEecCCC
Q 024436 144 ---AGTI----------EI-VAQ--LPGFPDNIKRSPRGG-FWVGIHSRRK 177 (268)
Q Consensus 144 ---~g~~----------~~-~~~--l~g~Pdgia~d~dG~-l~va~~~~~~ 177 (268)
.+.. .. ... .+..|.|+.++|||+ +|++......
T Consensus 250 ~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~ 300 (595)
T 1fwx_A 250 YQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPT 300 (595)
T ss_dssp SEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSB
T ss_pred eeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCe
Confidence 0000 11 111 224699999999997 6666666653
No 134
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.53 E-value=6.7e-05 Score=63.78 Aligned_cols=136 Identities=13% Similarity=0.120 Sum_probs=92.9
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeE-EEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRW-LHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~-~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
....+++++|+++.++++..++.|..++...... ..+.. ..++++++. .....+.|..+|..+++..
T Consensus 142 ~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~---~~~~dg~i~~~d~~~~~~~ 218 (337)
T 1gxr_A 142 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLW---TGGLDNTVRSWDLREGRQL 218 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE---EEETTSEEEEEETTTTEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEE---EEecCCcEEEEECCCCceE
Confidence 3467899999999999999999999998764422 22211 122223222 3345688999998877766
Q ss_pred EeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 104 VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 104 ~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
...........++++||++.|+++ ...+.|..|++.... ...+....+....++++++|+++++....+
T Consensus 219 ~~~~~~~~v~~~~~s~~~~~l~~~-~~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 219 QQHDFTSQIFSLGYCPTGEWLAVG-MESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeecCCCceEEEEECCCCCEEEEE-cCCCcEEEEECCCCC---eEEEcCCccceeEEEECCCCCEEEEecCCC
Confidence 555555567899999999977655 467889999987532 222222234577899999999777665554
No 135
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.51 E-value=0.00012 Score=64.09 Aligned_cols=143 Identities=15% Similarity=0.100 Sum_probs=91.9
Q ss_pred cCCCCCcceEEECCCC-CEEEEEeCCCeEEEEeCCCCeEEEEEEc-CCCCC-----e----eEEEeecCCcceEEEEeCC
Q 024436 30 IEGAIGPESLAFDALG-EGPYTGVSDGRIIKWHQDQRRWLHFART-SPNRN-----H----ISVILSGDKTGRLMKYDPA 98 (268)
Q Consensus 30 ~~~~~~P~gia~~~dG-~~l~~~~~~g~I~~~~~~g~~~~~~~~~-~~~~~-----~----~~~~~~~~~~g~v~~~d~~ 98 (268)
.+.-....+++++|+| ++++++..++.|..|+.++......... +.... | ...++....++.|..+|..
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 3334578899999999 8999999999999998764322222111 01100 0 1122334456788888888
Q ss_pred CCeEEEeecCC---CCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-EEEEEec
Q 024436 99 TKQVTVLLGNL---SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHS 174 (268)
Q Consensus 99 ~~~~~~~~~~~---~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l~va~~~ 174 (268)
+..+..+.... .....++|+||++.|+ +....+.|..|++.+. ....+..-.+....++++++|+ ++++...
T Consensus 150 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~---~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 150 GSVIQVFAKTDSWDYWYCCVDVSVSRQMLA-TGDSTGRLLLLGLDGH---EIFKEKLHKAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp SCEEEEEECCCCSSCCEEEEEEETTTTEEE-EEETTSEEEEEETTSC---EEEEEECSSSCEEEEEECSSCTTEEEEEET
T ss_pred CCceEEEeccCCCCCCeEEEEECCCCCEEE-EECCCCCEEEEECCCC---EEEEeccCCCcEEEEEECCCCCCEEEEEeC
Confidence 66565554433 4467999999998665 5557789999998642 1222322234567899999998 7666655
Q ss_pred CC
Q 024436 175 RR 176 (268)
Q Consensus 175 ~~ 176 (268)
.+
T Consensus 226 d~ 227 (383)
T 3ei3_B 226 DA 227 (383)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 136
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.50 E-value=0.0004 Score=61.08 Aligned_cols=86 Identities=17% Similarity=0.131 Sum_probs=55.0
Q ss_pred CcceEEEEeCCCCeEEEee--------cCCCCcceEEEccCCCEEEEEec-CCcEEEEEEccCCCCCceeEEEeCCCCCC
Q 024436 88 KTGRLMKYDPATKQVTVLL--------GNLSFPNGVALSEDGNYILLAET-TSCRILRYWLKTSKAGTIEIVAQLPGFPD 158 (268)
Q Consensus 88 ~~g~v~~~d~~~~~~~~~~--------~~~~~pnGia~spdg~~lyva~~-~~~~I~~~~~~~~~~g~~~~~~~l~g~Pd 158 (268)
..-++|.++...+.++.+. ..-.+.+.++|||||++|.++.. ..+.|..|++.... ....+ .-.+...
T Consensus 104 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~--~~~~~-~~~~~V~ 180 (365)
T 4h5i_A 104 KHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT--EKFEI-ETRGEVK 180 (365)
T ss_dssp CCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE--EEEEE-ECSSCCC
T ss_pred CcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc--EEEEe-CCCCceE
Confidence 3446777777655544331 11234567999999998877654 45789999987522 11111 2234567
Q ss_pred ceEEcCCCCEEEEEecCC
Q 024436 159 NIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 159 gia~d~dG~l~va~~~~~ 176 (268)
.+++.|||+++++.....
T Consensus 181 ~v~fspdg~~l~s~s~~~ 198 (365)
T 4h5i_A 181 DLHFSTDGKVVAYITGSS 198 (365)
T ss_dssp EEEECTTSSEEEEECSSC
T ss_pred EEEEccCCceEEecccee
Confidence 899999999887776543
No 137
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.49 E-value=4e-05 Score=67.86 Aligned_cols=151 Identities=11% Similarity=0.117 Sum_probs=98.0
Q ss_pred cceEEECCCCCEEEEEeCCCeEEEEeCCCC---------eEEEEEEcCCCCCeeEEEeecCCcceEEEEeCCCCeEEEee
Q 024436 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQR---------RWLHFARTSPNRNHISVILSGDKTGRLMKYDPATKQVTVLL 106 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~~g~I~~~~~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 106 (268)
..+++++|+|+.++++..++.|..++.... .........+++.++. .+...+.|..+|..+++.....
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFI---LGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEE---EEETTSCEEEECTTSCEEEEET
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEE---EEECCCCEEEEeCCCcceeeec
Confidence 458999999999999999999999986532 1122222233433322 3345678888998877766554
Q ss_pred -cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCCCcceeeeEe
Q 024436 107 -GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLS 185 (268)
Q Consensus 107 -~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~ 185 (268)
......+.++|+||++.|+ +-+..+.|..|++..+.. ...+..-.+....+++.++|+++++....+. |..
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~-----v~i 207 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALI-SSSQDMQLKIWSVKDGSN--PRTLIGHRATVTDIAIIDRGRNVLSASLDGT-----IRL 207 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCC--CEEEECCSSCEEEEEEETTTTEEEEEETTSC-----EEE
T ss_pred ccccCccEEEEECCCCCEEE-EEeCCCeEEEEeCCCCcC--ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCc-----EEE
Confidence 4455668999999998665 556778999999975321 2333322344678999999987666555442 333
Q ss_pred eC-ccceeeeecc
Q 024436 186 FP-WIGNVLIKLP 197 (268)
Q Consensus 186 ~~-~~g~~l~~i~ 197 (268)
+. ..++.+..+.
T Consensus 208 wd~~~~~~~~~~~ 220 (420)
T 3vl1_A 208 WECGTGTTIHTFN 220 (420)
T ss_dssp EETTTTEEEEEEC
T ss_pred eECCCCceeEEee
Confidence 32 4455555544
No 138
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.48 E-value=3.5e-05 Score=72.92 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=83.7
Q ss_pred CCCCCE-EEEEe-CCCeEEEEeCC----CCeEEEE--------------EEcCCCCCeeEEEeec-------CCcceEEE
Q 024436 42 DALGEG-PYTGV-SDGRIIKWHQD----QRRWLHF--------------ARTSPNRNHISVILSG-------DKTGRLMK 94 (268)
Q Consensus 42 ~~dG~~-l~~~~-~~g~I~~~~~~----g~~~~~~--------------~~~~~~~~~~~~~~~~-------~~~g~v~~ 94 (268)
+|||+. ++... .+.+|+.++.+ +.. ..+ ...++++.++.-.... .....|+.
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 399986 55443 47889999877 431 111 1123455444322222 22358999
Q ss_pred EeCCC------CeEEEee-cCCCCcceEEEccCCCEEEEEecCC-------cEEEEEEccC-CCCCceeEEEe-CCCCCC
Q 024436 95 YDPAT------KQVTVLL-GNLSFPNGVALSEDGNYILLAETTS-------CRILRYWLKT-SKAGTIEIVAQ-LPGFPD 158 (268)
Q Consensus 95 ~d~~~------~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~-------~~I~~~~~~~-~~~g~~~~~~~-l~g~Pd 158 (268)
+|.++ ++.+.+. .+......++|||||++|+++.... ..|+.+++++ +..+....+.. ..+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~ 245 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA 245 (662)
T ss_dssp EETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE
T ss_pred EECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc
Confidence 99987 7777776 6556677899999999998776433 5899999983 32212333332 234567
Q ss_pred ceEEcCCCCEEEEEecC
Q 024436 159 NIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 159 gia~d~dG~l~va~~~~ 175 (268)
.+++.+||++++.....
T Consensus 246 ~~~~spdg~l~~~~~~~ 262 (662)
T 3azo_A 246 QAEWAPDGSLIVATDRT 262 (662)
T ss_dssp EEEECTTSCEEEEECTT
T ss_pred ceEECCCCeEEEEECCC
Confidence 78999999976655443
No 139
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.47 E-value=0.00026 Score=61.11 Aligned_cols=138 Identities=16% Similarity=0.177 Sum_probs=90.5
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCC-eEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeE
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR-RWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~-~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
...-.++++.+++.+++++..|+.|..|+.... ....+.. ..+++.++ ..+...+.+..++.++++.
T Consensus 80 ~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l---~~g~~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 80 QLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL---ATGTHVGKVNIFGVESGKK 156 (321)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEE---EEECTTSEEEEEETTTCSE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEE---EEEcCCCcEEEEEcCCCce
Confidence 345678899999999999999999999997543 2222211 12233332 2345667888888876654
Q ss_pred EE-eecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 103 TV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 103 ~~-~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
.. +.........++|+|||++|+ +....+.|..|++..++. ...+..-......++++++|+++++....+
T Consensus 157 ~~~~~~~~~~v~~~~~spdg~~la-sg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 157 EYSLDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEE--EEEECCCSSCCCEEEECTTSCEEEEECTTS
T ss_pred eEEecCCCceEEEEEECCCCCEEE-EEcCCCeEEEEECCCCcE--EEEEcccCCceeEEEEcCCCCEEEEEcCCC
Confidence 43 334445568999999998665 555778999999874321 112211123357899999999877766554
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.47 E-value=1.1e-05 Score=67.16 Aligned_cols=139 Identities=13% Similarity=0.005 Sum_probs=86.4
Q ss_pred CcceEEECCCCCEEE-EEeCCC--eEEEEeCCCCeEEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCCeE
Q 024436 35 GPESLAFDALGEGPY-TGVSDG--RIIKWHQDQRRWLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 35 ~P~gia~~~dG~~l~-~~~~~g--~I~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
....++++|||+.++ +...++ +|+.++.++.....+. ..++++.++...........||.++.++++.
T Consensus 130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~ 209 (297)
T 2ojh_A 130 PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV 209 (297)
T ss_dssp SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE
T ss_pred CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc
Confidence 467789999999766 555666 5666666543222211 1234444443222234567899999776777
Q ss_pred EEeecCCCCcceEEEccCCCEEEEEecC----------CcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCE-EEE
Q 024436 103 TVLLGNLSFPNGVALSEDGNYILLAETT----------SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGF-WVG 171 (268)
Q Consensus 103 ~~~~~~~~~pnGia~spdg~~lyva~~~----------~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l-~va 171 (268)
..+.........++|+|||++|+++... ..+|+.|++++++......+....+....++++++|+. +++
T Consensus 210 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 210 ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYV 289 (297)
T ss_dssp EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEE
T ss_pred EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEE
Confidence 7666554556789999999988776543 26799999986432111111122345778999999984 444
Q ss_pred Ee
Q 024436 172 IH 173 (268)
Q Consensus 172 ~~ 173 (268)
..
T Consensus 290 ~~ 291 (297)
T 2ojh_A 290 RY 291 (297)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.47 E-value=6.8e-06 Score=76.85 Aligned_cols=139 Identities=14% Similarity=0.056 Sum_probs=86.1
Q ss_pred CcceEEECCCCC-EEEEEeCCCeEEEEeCCCCeEEEEEE-------cCCCCCeeEEEeec-CCcceEEEEeCCCCeEEEe
Q 024436 35 GPESLAFDALGE-GPYTGVSDGRIIKWHQDQRRWLHFAR-------TSPNRNHISVILSG-DKTGRLMKYDPATKQVTVL 105 (268)
Q Consensus 35 ~P~gia~~~dG~-~l~~~~~~g~I~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~-~~~g~v~~~d~~~~~~~~~ 105 (268)
+....+++|||+ ++++...++.+..++.++.....+.. .+|++.++...... .....|+.+|.++++.+.+
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l 190 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF 190 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe
Confidence 455668888886 35555555555566765443222221 12344443322221 2336799999988888887
Q ss_pred ecCCCCcceEEEccCCCEEEEEecCC-cEEEEEEccCCCCCceeEEEeCCCCCCceE--------EcCCCCEEEEEecCC
Q 024436 106 LGNLSFPNGVALSEDGNYILLAETTS-CRILRYWLKTSKAGTIEIVAQLPGFPDNIK--------RSPRGGFWVGIHSRR 176 (268)
Q Consensus 106 ~~~~~~pnGia~spdg~~lyva~~~~-~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia--------~d~dG~l~va~~~~~ 176 (268)
.......+.++|||||+.|+.++... .+|++|+++++. ...+....+.+.+++ +++||.++++....+
T Consensus 191 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 191 DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS---VEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC---EEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc---EEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 76666678999999999999655433 389999998643 232211222344566 999998877766554
No 142
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.46 E-value=1.4e-05 Score=67.04 Aligned_cols=142 Identities=15% Similarity=0.087 Sum_probs=89.1
Q ss_pred CCEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEEcC------CCCCeeEEEeecCCcceEEEE
Q 024436 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFARTS------PNRNHISVILSGDKTGRLMKY 95 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~~~~------~~~~~~~~~~~~~~~g~v~~~ 95 (268)
+-++.++++.-...+|+++. ++++|.....+++++.+|++.-. ...+.... .++..+ +.+ +..++|+.+
T Consensus 54 kv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L--~vS-dgs~~l~~i 129 (243)
T 3mbr_X 54 RILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALTSDDSHL--YMS-DGTAVIRKL 129 (243)
T ss_dssp CEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEEECSSCE--EEE-CSSSEEEEE
T ss_pred CEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEeeCCCEE--EEE-CCCCeEEEE
Confidence 45566777763445666665 24444455568999999986533 23332111 111111 223 357899999
Q ss_pred eCCCCeEEEee----c--CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe---C----------C-C
Q 024436 96 DPATKQVTVLL----G--NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ---L----------P-G 155 (268)
Q Consensus 96 d~~~~~~~~~~----~--~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~---l----------~-g 155 (268)
||++.++..-. . .+.+.|.+.+. +| .||++...++.|.++|+..++ .....+ + . .
T Consensus 130 Dp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp~tG~---V~~~idl~~l~~~~~~~~~~~~~ 204 (243)
T 3mbr_X 130 DPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG-ELLANVWLTSRIARIDPASGK---VVAWIDLQALVPDADALTDSTND 204 (243)
T ss_dssp CTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTTTEEEEECTTTCB---EEEEEECGGGSTTTTSCCCTTSS
T ss_pred eCCCCeEEEEEEEccCCcccccceeeEEe-CC-EEEEEECCCCeEEEEECCCCC---EEEEEECCcCccccccccCCcCC
Confidence 99987654322 1 24567888876 66 599999899999999997543 222222 1 0 2
Q ss_pred CCCceEEcCCC-CEEEEEe
Q 024436 156 FPDNIKRSPRG-GFWVGIH 173 (268)
Q Consensus 156 ~Pdgia~d~dG-~l~va~~ 173 (268)
.|+|||.|+++ +|||+.-
T Consensus 205 vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 205 VLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CEEEEEEETTTTEEEEEET
T ss_pred ceEEEEEcCCCCEEEEECC
Confidence 67999999976 5888763
No 143
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.44 E-value=0.00014 Score=62.07 Aligned_cols=138 Identities=13% Similarity=0.147 Sum_probs=88.8
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEEc---------CCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFART---------SPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~~~---------~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
..-.+++|+|+|++++++..||.|..|+..... ...+... .++++++ ..+..++.|..+|..+++..
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~s~s~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWI---IVGSDDFRIRVFNYNTGEKV 90 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEE---EEEETTSEEEEEETTTCCEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEE---EEECCCCEEEEEECCCCcEE
Confidence 468899999999999999999999999976442 2222111 1112222 23345678888888877654
Q ss_pred -EeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcC-CCCEEEEEecCC
Q 024436 104 -VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP-RGGFWVGIHSRR 176 (268)
Q Consensus 104 -~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~-dG~l~va~~~~~ 176 (268)
.+...-..-+.++|+|++++| ++.+..+.|..|++..+.. ....+..-......++++| +++++++....+
T Consensus 91 ~~~~~h~~~v~~~~~~~~~~~l-~sgs~D~~v~lWd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 91 VDFEAHPDYIRSIAVHPTKPYV-LSGSDDLTVKLWNWENNWA-LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEE-EEEETTSCEEEEEGGGTTE-EEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred EEEeCCCCcEEEEEEcCCCCEE-EEECCCCeEEEEECCCCcc-hhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 344445567899999999855 5667889999999874310 0111211122356788888 567666555444
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.44 E-value=3.8e-05 Score=73.23 Aligned_cols=83 Identities=18% Similarity=0.184 Sum_probs=54.4
Q ss_pred CcceEEEEeCCCCeEEEeecC---CCCcceEEEccCCCEEEEEecCC----cEEEEEEccCCCCCceeEEE-e-CCC---
Q 024436 88 KTGRLMKYDPATKQVTVLLGN---LSFPNGVALSEDGNYILLAETTS----CRILRYWLKTSKAGTIEIVA-Q-LPG--- 155 (268)
Q Consensus 88 ~~g~v~~~d~~~~~~~~~~~~---~~~pnGia~spdg~~lyva~~~~----~~I~~~~~~~~~~g~~~~~~-~-l~g--- 155 (268)
....|+.+|.++++.+.+... ...+..++|+|||++|+++.... ..|+.|+++++. ....+. . ...
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVETDKHYVE 310 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEECSSCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEccCCCeEC
Confidence 446899999998877665422 23467899999999898865433 488999987531 122222 1 111
Q ss_pred CCCceEEcC--CCCEEEEE
Q 024436 156 FPDNIKRSP--RGGFWVGI 172 (268)
Q Consensus 156 ~Pdgia~d~--dG~l~va~ 172 (268)
....+++.+ ||+++++.
T Consensus 311 ~~~~~~~sp~~dg~~l~~~ 329 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQS 329 (706)
T ss_dssp CCSCCEECTTCSSEEEEEE
T ss_pred ccCCceeecCCCCEEEEEE
Confidence 236789999 99854444
No 145
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=6.5e-05 Score=72.99 Aligned_cols=217 Identities=17% Similarity=0.180 Sum_probs=121.8
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc-CCCCCeeEEEeec--------CCcceEEEEeCCCCeEEEe
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART-SPNRNHISVILSG--------DKTGRLMKYDPATKQVTVL 105 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~--------~~~g~v~~~d~~~~~~~~~ 105 (268)
...+++.+++|+ ++++..++.|.+++++...+..+... +.....+..+..+ ...+.|+++++++++.+..
T Consensus 364 ~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~ 442 (781)
T 3v9f_A 364 VVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQII 442 (781)
T ss_dssp CEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEEC
T ss_pred ceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEe
Confidence 456788899999 55666667788888765433222100 0001112222111 2236799999987877765
Q ss_pred ecC---CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC------CCCCCceEEcCCCCEEEEEecCC
Q 024436 106 LGN---LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL------PGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 106 ~~~---~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l------~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
... ......|+.+++| .||++.. +.|++|+.+++. ...+... ...+..|+.|++|+||++....+
T Consensus 443 ~~~~~~~~~v~~i~~d~~g-~lwigt~--~Gl~~~~~~~~~---~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G 516 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNK-KIWIGTH--AGVFVIDLASKK---VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG 516 (781)
T ss_dssp CSTTTCCCCEEEEEECTTS-EEEEEET--TEEEEEESSSSS---CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC
T ss_pred ccCCCCCCeEEEEEECCCC-CEEEEEC--CceEEEeCCCCe---EEecccCcccccccceeEEEEEcCCCCEEEEEcCCC
Confidence 431 2345678888888 5998865 679999987533 2223221 12456789999999999997554
Q ss_pred CcceeeeEeeCccceeeeeccc----cceeeeeeccc-------cCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEE
Q 024436 177 KGISKLVLSFPWIGNVLIKLPI----DIVKIHSSLVK-------LSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVE 245 (268)
Q Consensus 177 ~~~~~~v~~~~~~g~~l~~i~~----~~~~~~~~~~~-------~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~ 245 (268)
+.++.+..+....+.. +...+.+++.. .+.. |.+.+++++.+....+...+|-.-..+..+.
T Consensus 517 ------l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~-Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~ 589 (781)
T 3v9f_A 517 ------VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGE-GLVCFPSARNFDYQVFQRKEGLPNTHIRAIS 589 (781)
T ss_dssp ------EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETT-EEEEESCTTTCCCEEECGGGTCSCCCCCEEE
T ss_pred ------EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECC-CceEEECCCCCcEEEccccCCCCCceEEEEE
Confidence 5555544333332221 11112222110 1122 5446677765445555544442222344454
Q ss_pred E-eCCEEEEeeCCCCeEEEEeCC
Q 024436 246 E-KDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 246 ~-~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
. .+|+||+++. +.|.+++.+
T Consensus 590 ~d~~g~lW~~t~--~Gl~~~~~~ 610 (781)
T 3v9f_A 590 EDKNGNIWASTN--TGISCYITS 610 (781)
T ss_dssp ECSSSCEEEECS--SCEEEEETT
T ss_pred ECCCCCEEEEcC--CceEEEECC
Confidence 4 4789999984 457777654
No 146
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.43 E-value=0.00056 Score=58.67 Aligned_cols=166 Identities=16% Similarity=0.175 Sum_probs=93.9
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEE--------EcCCCCCeeEEEeec--CCcceE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFA--------RTSPNRNHISVILSG--DKTGRL 92 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~--------~~~~~~~~~~~~~~~--~~~g~v 92 (268)
.+..+.-. .....+++++|+++.++++..++.|..|+... +....+. ...++..++...... ...+.|
T Consensus 66 ~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 66 RLGTLDGH-TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSI 144 (369)
T ss_dssp EEEEECCC-SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEE
T ss_pred hhhhhhhc-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEE
Confidence 44444322 34578999999999999999999999998754 3222221 112333333221110 112566
Q ss_pred EEEeCCCCe------------EEEeecC--CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCC
Q 024436 93 MKYDPATKQ------------VTVLLGN--LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPD 158 (268)
Q Consensus 93 ~~~d~~~~~------------~~~~~~~--~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pd 158 (268)
..+|..+++ ...+... ......++++|+++.|+++ ...+.|..|++.... .....+....+...
T Consensus 145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~ 222 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG-HKDGKISKYDVSNNY-EYVDSIDLHEKSIS 222 (369)
T ss_dssp EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE-ETTSEEEEEETTTTT-EEEEEEECCSSCEE
T ss_pred EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE-cCCCEEEEEECCCCc-EeEEEEecCCCcee
Confidence 666554321 1111111 1267889999999877655 567899999987421 11122222234567
Q ss_pred ceEEcCCCCEEEEEecCCCcceeeeEeeC-ccceeeeecc
Q 024436 159 NIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLP 197 (268)
Q Consensus 159 gia~d~dG~l~va~~~~~~~~~~~v~~~~-~~g~~l~~i~ 197 (268)
.++++++|+++++....+. |..+. ..++.+..+.
T Consensus 223 ~~~~~~~~~~l~~~~~d~~-----i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 223 DMQFSPDLTYFITSSRDTN-----SFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEECTTSSEEEEEETTSE-----EEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEEEEecCCce-----EEEEECCCCceeeeec
Confidence 8999999987666655442 33332 4455555444
No 147
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.41 E-value=0.00025 Score=65.62 Aligned_cols=164 Identities=19% Similarity=0.240 Sum_probs=99.8
Q ss_pred CEEEEecCCCCC-cceEEECC--CCCEEEEEeCCCeEEEEeCC-C--------CeEEEEE---------EcCCCCCeeEE
Q 024436 24 GVVQYQIEGAIG-PESLAFDA--LGEGPYTGVSDGRIIKWHQD-Q--------RRWLHFA---------RTSPNRNHISV 82 (268)
Q Consensus 24 ~~~~i~~~~~~~-P~gia~~~--dG~~l~~~~~~g~I~~~~~~-g--------~~~~~~~---------~~~~~~~~~~~ 82 (268)
.+..+.-.. .. ..+++++| +|++++++..+|.|..|+.. + +....+. ..++++.++..
T Consensus 55 ~~~~~~~h~-~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 55 PVVQFTGHG-SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp SEEEECTTT-TSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred cceEEecCC-CceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 444444332 34 68999999 99999999999999988863 2 1111111 11233333322
Q ss_pred Eeec-CCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCC---CCC
Q 024436 83 ILSG-DKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPG---FPD 158 (268)
Q Consensus 83 ~~~~-~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g---~Pd 158 (268)
...+ ...+.|+.+|.. .....+.......+.++|+|+++.++++....+.|..|++.... ....+....+ ...
T Consensus 134 ~~~~~~~~~~v~~~d~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~~~~~~~~~v~ 210 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSG-NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDRTHHKQGSFVR 210 (615)
T ss_dssp EECCSSCSEEEEETTTC-CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEECSSSCTTCCEE
T ss_pred eccCCCCccEEEEEECC-CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeecccCCCCceEE
Confidence 2111 123788888844 44555555556678999999998666777788999999976421 1111211122 345
Q ss_pred ceEEcCC-CCEEEEEecCCCcceeeeEeeC-ccceeeeec
Q 024436 159 NIKRSPR-GGFWVGIHSRRKGISKLVLSFP-WIGNVLIKL 196 (268)
Q Consensus 159 gia~d~d-G~l~va~~~~~~~~~~~v~~~~-~~g~~l~~i 196 (268)
.+++.++ |+++++....+. |..+. ..++.+..+
T Consensus 211 ~~~~~~~~~~~l~~~~~dg~-----i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 211 DVEFSPDSGEFVITVGSDRK-----ISCFDGKSGEFLKYI 245 (615)
T ss_dssp EEEECSTTCCEEEEEETTCC-----EEEEETTTCCEEEEC
T ss_pred EEEECCCCCCEEEEEeCCCe-----EEEEECCCCCEeEEe
Confidence 7899999 987666555442 44443 456666666
No 148
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.40 E-value=0.00045 Score=59.39 Aligned_cols=139 Identities=17% Similarity=0.164 Sum_probs=90.9
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE---------cCCCCCe---eEEEeecCCcceEEEEeCCCCe
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR---------TSPNRNH---ISVILSGDKTGRLMKYDPATKQ 101 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~---------~~~~~~~---~~~~~~~~~~g~v~~~d~~~~~ 101 (268)
....+++++|++++++++..|+.|..|+..+.....+.. ..+.... ...+.....++.|..+|..+++
T Consensus 108 ~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 187 (319)
T 3frx_A 108 SDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ 187 (319)
T ss_dssp SCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch
Confidence 467889999999999999999999999987764332211 0111100 0012344456788888887666
Q ss_pred EEEe-ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 102 VTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 102 ~~~~-~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
.... ...-...+.++|+|||++| ++-...+.|..|++...+. ...+ ........+++.|+|.++++.....
T Consensus 188 ~~~~~~~h~~~v~~~~~sp~g~~l-~s~~~dg~i~iwd~~~~~~--~~~~-~~~~~v~~~~~sp~~~~la~~~~~~ 259 (319)
T 3frx_A 188 IEADFIGHNSNINTLTASPDGTLI-ASAGKDGEIMLWNLAAKKA--MYTL-SAQDEVFSLAFSPNRYWLAAATATG 259 (319)
T ss_dssp EEEEECCCCSCEEEEEECTTSSEE-EEEETTCEEEEEETTTTEE--EEEE-ECCSCEEEEEECSSSSEEEEEETTE
T ss_pred hheeecCCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCcE--EEEe-cCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 5443 3444556899999999855 5666789999999875321 1111 1223466899999998777665543
No 149
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.40 E-value=0.00014 Score=62.66 Aligned_cols=154 Identities=11% Similarity=0.155 Sum_probs=94.8
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEEc---------CCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFART---------SPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~~~---------~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
..-..+++.|+|++++++..|+.|..|+... +....+... .++..++ ..+..++.|..+|.++..+.
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l---~s~s~D~~i~vwd~~~~~~~ 142 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMI---ISGSRDKTIKVWTIKGQCLA 142 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEE---EEEETTSCEEEEETTSCEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEE---EEEeCCCeEEEEECCCCeEE
Confidence 4567899999999999999999999999754 332222211 1222222 23345667777887755555
Q ss_pred EeecCCCCcceEEEccCCC-----EEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCCCc
Q 024436 104 VLLGNLSFPNGVALSEDGN-----YILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKG 178 (268)
Q Consensus 104 ~~~~~~~~pnGia~spdg~-----~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~ 178 (268)
.+.......+.+++.|+++ .++++....+.|..|++..... ...+..-.+....+++.|+|+++++....+.
T Consensus 143 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~- 219 (319)
T 3frx_A 143 TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI--EADFIGHNSNINTLTASPDGTLIASAGKDGE- 219 (319)
T ss_dssp EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE--EEEECCCCSCEEEEEECTTSSEEEEEETTCE-
T ss_pred EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh--heeecCCCCcEEEEEEcCCCCEEEEEeCCCe-
Confidence 5655555667889988532 2556777889999999874211 1112111234567899999997776665543
Q ss_pred ceeeeEeeC-ccceeeeecc
Q 024436 179 ISKLVLSFP-WIGNVLIKLP 197 (268)
Q Consensus 179 ~~~~v~~~~-~~g~~l~~i~ 197 (268)
|..+. ..++.+..+.
T Consensus 220 ----i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 220 ----IMLWNLAAKKAMYTLS 235 (319)
T ss_dssp ----EEEEETTTTEEEEEEE
T ss_pred ----EEEEECCCCcEEEEec
Confidence 33332 3455554443
No 150
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.40 E-value=6.4e-05 Score=65.83 Aligned_cols=132 Identities=11% Similarity=0.042 Sum_probs=83.8
Q ss_pred eEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE------------cCCCCCeeEEEe-------------------ec
Q 024436 38 SLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR------------TSPNRNHISVIL-------------------SG 86 (268)
Q Consensus 38 gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~------------~~~~~~~~~~~~-------------------~~ 86 (268)
+++++|||+.++....++.|++++.++........ ..+++.++.... ..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 67999999988888888899999876542221111 123332222110 12
Q ss_pred CCcceEEEEeCCCCeEEEeecCCCCcceEEEcc-CCCEEEEEecC-----CcEEEEEEccCCCCCceeEEEeCC-C-CCC
Q 024436 87 DKTGRLMKYDPATKQVTVLLGNLSFPNGVALSE-DGNYILLAETT-----SCRILRYWLKTSKAGTIEIVAQLP-G-FPD 158 (268)
Q Consensus 87 ~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~sp-dg~~lyva~~~-----~~~I~~~~~~~~~~g~~~~~~~l~-g-~Pd 158 (268)
.....|+.+|.++++.+.+.......+.++|+| ||+.|+++... ..+|+.++.+++. ...+.... + ...
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~ 241 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN---MRKVKTHAEGESCT 241 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC---CEESCCCCTTEEEE
T ss_pred CCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc---eEEeeeCCCCcccc
Confidence 344789999999898888876666678999999 99877655433 4489999987632 22222111 1 123
Q ss_pred ceEEcCCCC-EEEEE
Q 024436 159 NIKRSPRGG-FWVGI 172 (268)
Q Consensus 159 gia~d~dG~-l~va~ 172 (268)
..+++|||+ |+...
T Consensus 242 ~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 242 HEFWVPDGSALVYVS 256 (388)
T ss_dssp EEEECTTSSCEEEEE
T ss_pred cceECCCCCEEEEEe
Confidence 468999997 53433
No 151
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.37 E-value=0.00016 Score=62.64 Aligned_cols=191 Identities=7% Similarity=0.008 Sum_probs=109.5
Q ss_pred CCeEEEEeCCCCeEEEEEE-----cCCCCCeeEEEe-ecCCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEE
Q 024436 54 DGRIIKWHQDQRRWLHFAR-----TSPNRNHISVIL-SGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLA 127 (268)
Q Consensus 54 ~g~I~~~~~~g~~~~~~~~-----~~~~~~~~~~~~-~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva 127 (268)
.+.|++++.+|...+.+.. .++..++++-.. .......|++++.++...+++..... ++++++|+.||++
T Consensus 87 ~~~Iy~i~~dg~~~~~l~~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t 162 (302)
T 3s25_A 87 RNSLCRIKRNGHGSTVLDPDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYN 162 (302)
T ss_dssp SEEEEEEETTSCCCEEEECSCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEE
T ss_pred CCeEEEEeCCCCcceEeecCCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEE
Confidence 3689999998864222211 111222322111 12456789999998666666665533 5679999999999
Q ss_pred ecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCC-CEEEEEecCCCcceeeeEeeCccceeeeecccc-c-----
Q 024436 128 ETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRG-GFWVGIHSRRKGISKLVLSFPWIGNVLIKLPID-I----- 200 (268)
Q Consensus 128 ~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG-~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~-~----- 200 (268)
+....+|++.+++|+. .+.+.. + +..+.+.|+| .||.+.+..+.+ |.+...+|.-...+... .
T Consensus 163 ~~g~~~Iy~~~l~g~~---~~~l~~--~-~~~~~~~P~g~~iy~t~~~~~~~----I~~~~ldG~~~~~Lt~~~~~~~~~ 232 (302)
T 3s25_A 163 NPKNGQLYRYDTASQS---EALFYD--C-NCYKPVVLDDTNVYYMDVNRDNA----IVHVNINNPNPVVLTEANIEHYNV 232 (302)
T ss_dssp CTTTCCEEEEETTTTE---EEEEEC--S-CEEEEEEEETTEEEEEEGGGTTE----EEEECSSSCCCEECSCSCEEEEEE
T ss_pred eCCCceEEEEECCCCC---EEEEeC--C-CccceeeecCCEEEEEEcCCCcE----EEEEECCCCCeEEEeCCCcceEEE
Confidence 9888899999998732 333322 2 3344566665 477777764323 44444444432222211 0
Q ss_pred --eeeeeeccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEEEeeCCCCeEEEEeCC
Q 024436 201 --VKIHSSLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 201 --~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
..+..+-. ... ..+..++.||...+.+... . ...+...+++||.+.+....|.+++++
T Consensus 233 ~g~~Iy~~~~--~~~-~~i~~~~~DG~~r~~l~~~--~----~~~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 233 YGSLIFYQRG--GDN-PALCVVKNDGTGFKELAKG--E----FCNINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp ETTEEEEEEC--SSS-CEEEEEETTSCCCEEEEES--C----EEEEEECSSEEEEEETTTCCEEEEESS
T ss_pred CCCEEEEEEC--CCC-cEEEEEECCCCccEEeeCC--c----cceEEEeCCEEEEEECCCCeEEEEECC
Confidence 11111111 111 3456666666544444321 1 224566899999999999989888764
No 152
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.37 E-value=0.00053 Score=59.39 Aligned_cols=137 Identities=12% Similarity=0.183 Sum_probs=86.4
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCCe-
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATKQ- 101 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~- 101 (268)
...-.+++++|||++++++..|+.|..|+.. ++....+. ...+++.++. .+...+.+..++..+++
T Consensus 55 ~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~---s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 55 LAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA---CGGLDNICSIYNLKTREG 131 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEE---EEETTCEEEEEETTTCSB
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEE---EEeCCCeEEEEECccCCC
Confidence 4567899999999999999999999999864 33222221 1123333332 22345667777765432
Q ss_pred ----EEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 102 ----VTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 102 ----~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
...+.........++|+++++ + ++.+..+.|..|++..+. ....+..-.+....+++.++|+++++....+
T Consensus 132 ~~~~~~~~~~h~~~v~~~~~~~~~~-l-~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~ 206 (340)
T 1got_B 132 NVRVSRELAGHTGYLSCCRFLDDNQ-I-VTSSGDTTCALWDIETGQ--QTTTFTGHTGDVMSLSLAPDTRLFVSGACDA 206 (340)
T ss_dssp SCEEEEEEECCSSCEEEEEEEETTE-E-EEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeEEEecCCCccEEEEEECCCCc-E-EEEECCCcEEEEECCCCc--EEEEEcCCCCceEEEEECCCCCEEEEEeCCC
Confidence 223344445567899999884 4 455678899999987421 1122211123456789999999877766555
No 153
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.36 E-value=0.00011 Score=65.16 Aligned_cols=144 Identities=13% Similarity=0.037 Sum_probs=95.6
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCC-eEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeE
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR-RWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~-~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
.....+++++|+|+.++++..++.|..|+.... ....+.. ..+....+.....+..++.|..+|..+++.
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 346889999999999999999999999987643 2222211 122222332222233578999999887776
Q ss_pred EEeecCCCCcceEEEccCCCEEEEEe-cCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 103 TVLLGNLSFPNGVALSEDGNYILLAE-TTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 103 ~~~~~~~~~pnGia~spdg~~lyva~-~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
..........+.++|+|+++.|+++. ...+.|..|++..+.......+..-.+....++++++|+++++....+
T Consensus 297 ~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 297 VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDE 371 (401)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTS
T ss_pred EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 65555556678999999999887763 467899999987532111111111224577899999998777665554
No 154
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.35 E-value=0.00029 Score=68.50 Aligned_cols=213 Identities=13% Similarity=0.185 Sum_probs=120.1
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC--C----CCCeeEEEee---------cCCcceEEEEeCCC
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTS--P----NRNHISVILS---------GDKTGRLMKYDPAT 99 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~--~----~~~~~~~~~~---------~~~~g~v~~~d~~~ 99 (268)
...+++.+++|+ ++++..++.|.++++....+..+.... + ..+.+..+.. +...+.|+++|+++
T Consensus 358 ~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~ 436 (795)
T 4a2l_A 358 VVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS 436 (795)
T ss_dssp SEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT
T ss_pred eeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC
Confidence 356788999999 556777778999988755444442110 0 0111222211 11235799999988
Q ss_pred CeEEEeecC-----CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe------CC-CCCCceEEcCCCC
Q 024436 100 KQVTVLLGN-----LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ------LP-GFPDNIKRSPRGG 167 (268)
Q Consensus 100 ~~~~~~~~~-----~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~------l~-g~Pdgia~d~dG~ 167 (268)
++.+..... ......|+.+++|+ ||++.. +.|++|+.+++ ....+.. ++ .....++.|++|+
T Consensus 437 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwigt~--~Gl~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~i~~d~~g~ 510 (795)
T 4a2l_A 437 GQVENFNQRNSQLVNENVYAILPDGEGN-LWLGTL--SALVRFNPEQR---SFTTIEKEKDGTPVVSKQITTLFRDSHKR 510 (795)
T ss_dssp CCEEEECTTTSCCSCSCEEEEEECSSSC-EEEEES--SCEEEEETTTT---EEEECCBCTTCCBCCCCCEEEEEECTTCC
T ss_pred CcEEEeecCCCCcCCCeeEEEEECCCCC-EEEEec--CceeEEeCCCC---eEEEccccccccccCCceEEEEEECCCCC
Confidence 877765421 12346788888886 888865 56899997642 2222211 11 2345688999999
Q ss_pred EEEEEecCCCcceeeeEeeCc-cceeeeecc-------ccceeeeeecccc-------CCCcEEEEEECCCCCEEEEEEc
Q 024436 168 FWVGIHSRRKGISKLVLSFPW-IGNVLIKLP-------IDIVKIHSSLVKL-------SGNGGMAMRISEQGNVLEILEE 232 (268)
Q Consensus 168 l~va~~~~~~~~~~~v~~~~~-~g~~l~~i~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~G~~~~~~~~ 232 (268)
+|++.. .+ +.++.+ .+++ .+. .+...+.+++... +.. | +.+++++......+..
T Consensus 511 lWigt~-~G------l~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-G-l~~~d~~~~~~~~~~~ 579 (795)
T 4a2l_A 511 LWIGGE-EG------LSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-G-FYCFNEKDKQIKRYNT 579 (795)
T ss_dssp EEEEES-SC------EEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-C-EEEEETTTTEEEEECG
T ss_pred EEEEeC-Cc------eEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-C-ceeECCCCCcEEEeCC
Confidence 999987 33 444432 2333 211 1111222222110 111 2 4567776666666654
Q ss_pred CCCCceeceEEEEE-eCCEEEEeeCCCCeEEEEeCC
Q 024436 233 IGRKMWRSISEVEE-KDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 233 ~~g~~~~~~s~~~~-~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
.+|-.-..+..+.. .+|+||+++ .+.|.+++.+
T Consensus 580 ~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~ 613 (795)
T 4a2l_A 580 TNGLPNNVVYGILEDSFGRLWLST--NRGISCFNPE 613 (795)
T ss_dssp GGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEETT
T ss_pred CCCCchhheEEEEECCCCCEEEEc--CCceEEEcCC
Confidence 44422233455554 468999999 4678887654
No 155
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.35 E-value=0.00013 Score=63.91 Aligned_cols=139 Identities=14% Similarity=0.173 Sum_probs=87.2
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCC-eEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQR-RWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~-~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
..-.+++++|||++++++..|+.|..|+.... ....+.. ..++...+ +.....++.|..+|..+++..
T Consensus 128 ~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~--l~s~s~D~~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 128 DIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV--FLSCSEDNRILLWDTRCPKPA 205 (344)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE--EEEEETTSCEEEEETTSSSCE
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc--eeeecccccccccccccccee
Confidence 35688999999999999999999999997543 2222211 11222212 123345678888888776544
Q ss_pred Eee---cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCC-CEEEEEecCC
Q 024436 104 VLL---GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRG-GFWVGIHSRR 176 (268)
Q Consensus 104 ~~~---~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG-~l~va~~~~~ 176 (268)
... ......+.++++|++..++++.+.++.|..|++..++. ...+..-.+....+++.|+| +++++....+
T Consensus 206 ~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~ 280 (344)
T 4gqb_B 206 SQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSEDC 280 (344)
T ss_dssp EECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred eeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeCCC
Confidence 332 22335678999997766778878889999999875321 22222212335678999998 4555554443
No 156
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.35 E-value=0.00077 Score=58.56 Aligned_cols=146 Identities=16% Similarity=0.142 Sum_probs=85.7
Q ss_pred EEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEE-EEE------------cCCCCCeeEEEeecCCcce
Q 024436 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLH-FAR------------TSPNRNHISVILSGDKTGR 91 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~-~~~------------~~~~~~~~~~~~~~~~~g~ 91 (268)
+.++.-........++++|+|++++++..|+.|..|+.++..+.. ... .++++.++. ....++.
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~---s~s~D~~ 84 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLA---SASFDAT 84 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEE---EEETTSC
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEE---EEECCCc
Confidence 444443322246789999999999999999999988765543221 111 123333332 2223444
Q ss_pred EEEEeCCCCeE---EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC---CCCCCceEEcCC
Q 024436 92 LMKYDPATKQV---TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL---PGFPDNIKRSPR 165 (268)
Q Consensus 92 v~~~d~~~~~~---~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l---~g~Pdgia~d~d 165 (268)
+..++..+++. ..+...-...+.++|+|||++| ++-+..+.|..|+++... .......+ ......+++.++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-~s~s~D~~v~iwd~~~~~--~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL-ATCSRDKSVWVWEVDEED--EYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEEECTTS--CEEEEEEECCCCSCEEEEEECSS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEE-EEEECCCeEEEEECCCCC--CeEEEEEecCcCCCeEEEEECCC
Confidence 44444443332 2333444556899999999855 566677899999987432 12222222 223457889999
Q ss_pred CCEEEEEecCC
Q 024436 166 GGFWVGIHSRR 176 (268)
Q Consensus 166 G~l~va~~~~~ 176 (268)
|+++++....+
T Consensus 162 ~~~l~s~s~d~ 172 (345)
T 3fm0_A 162 QELLASASYDD 172 (345)
T ss_dssp SSCEEEEETTS
T ss_pred CCEEEEEeCCC
Confidence 98666555444
No 157
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.35 E-value=0.00017 Score=63.28 Aligned_cols=216 Identities=15% Similarity=0.086 Sum_probs=119.6
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeEEEe
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQVTVL 105 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 105 (268)
...+++++|+|++++++..+|.|..|+.+++....+.. ..++..++. .....+.|..+|..+++....
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHII---SMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEE---EEETTCCEEEEETTTTEEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEE---EEecCCeEEEEECCCCcEEEE
Confidence 57899999999999999999999999977764333321 123333332 234567888888877765443
Q ss_pred ecCCC-C---------------cceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEE
Q 024436 106 LGNLS-F---------------PNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFW 169 (268)
Q Consensus 106 ~~~~~-~---------------pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~ 169 (268)
..... . ...++++|++. + ++....+.|..|++..... ...+....+....++++++|+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~g~i~~~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDK-F-VIPGPKGAIFVYQITEKTP--TGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTE-E-EEECGGGCEEEEETTCSSC--SEEECCCSSCEEEEEEETTTTEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCE-E-EEEcCCCeEEEEEcCCCce--eeeeccCCCceEEEEECCCCCEE
Confidence 32221 2 67899999873 4 4556678999999875321 22222222345678999999866
Q ss_pred EEEecCCCcceeeeEeeC-ccceeeeeccccceeeeeec-cc------cCCCcEEEEEECC-CCCEEEEEEcCCCCceec
Q 024436 170 VGIHSRRKGISKLVLSFP-WIGNVLIKLPIDIVKIHSSL-VK------LSGNGGMAMRISE-QGNVLEILEEIGRKMWRS 240 (268)
Q Consensus 170 va~~~~~~~~~~~v~~~~-~~g~~l~~i~~~~~~~~~~~-~~------~~~~~~~~~~~~~-~G~~~~~~~~~~g~~~~~ 240 (268)
++....+. |..+. ..++.+..+......+.++. .+ .... +.+...+. .++.+..+....+ .
T Consensus 263 ~~~~~d~~-----i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~----~ 332 (425)
T 1r5m_A 263 LSASDDGT-----LRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMD-GSVRLWSLKQNTLLALSIVDGV----P 332 (425)
T ss_dssp EEEETTSC-----EEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETT-SEEEEEETTTTEEEEEEECTTC----C
T ss_pred EEEcCCCE-----EEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCC-CcEEEEECCCCcEeEecccCCc----c
Confidence 66554442 33333 33443333322111122111 00 0111 22333443 3455555544322 2
Q ss_pred eEEEEE-eCCEEEEeeCCCCeEEEEeCC
Q 024436 241 ISEVEE-KDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 241 ~s~~~~-~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
++.+.. .++++++....+..|.+++++
T Consensus 333 i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 333 IFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred EEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 334443 345555545556778877753
No 158
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.35 E-value=0.00098 Score=58.94 Aligned_cols=165 Identities=14% Similarity=0.111 Sum_probs=99.6
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEEcCC-------CCCeeEEEeecCCcceEEEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFARTSP-------NRNHISVILSGDKTGRLMKY 95 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~~~~~-------~~~~~~~~~~~~~~g~v~~~ 95 (268)
....+..+......+++++|+|++++++..+|.|..|+... +....+..... ++.+ +..+...+.|..+
T Consensus 125 ~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---l~~~~~dg~i~i~ 201 (401)
T 4aez_A 125 VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHV---LSSGSRSGAIHHH 201 (401)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTE---EEEEETTSEEEEE
T ss_pred EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCE---EEEEcCCCCEEEE
Confidence 44455554345688999999999999999999999998754 32222211000 0111 2233456788888
Q ss_pred eCCC-C-eEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-EEEEE
Q 024436 96 DPAT-K-QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGI 172 (268)
Q Consensus 96 d~~~-~-~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l~va~ 172 (268)
|..+ + ....+........+++|+||++.|+ +.+..+.|..|++.... ....+....+....+++.++|. ++++.
T Consensus 202 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 202 DVRIANHQIGTLQGHSSEVCGLAWRSDGLQLA-SGGNDNVVQIWDARSSI--PKFTKTNHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTCSS--EEEEECCCSSCCCEEEECTTSTTEEEEE
T ss_pred ecccCcceeeEEcCCCCCeeEEEEcCCCCEEE-EEeCCCeEEEccCCCCC--ccEEecCCcceEEEEEECCCCCCEEEEe
Confidence 8763 2 3444555556678999999998665 55567899999987422 1122222234567899999874 66654
Q ss_pred ec-CCCcceeeeEeeC-ccceeeeeccc
Q 024436 173 HS-RRKGISKLVLSFP-WIGNVLIKLPI 198 (268)
Q Consensus 173 ~~-~~~~~~~~v~~~~-~~g~~l~~i~~ 198 (268)
.+ .... |..+. ..++.+..+..
T Consensus 279 ~gs~d~~----i~i~d~~~~~~~~~~~~ 302 (401)
T 4aez_A 279 GGTMDKQ----IHFWNAATGARVNTVDA 302 (401)
T ss_dssp CCTTTCE----EEEEETTTCCEEEEEEC
T ss_pred cCCCCCE----EEEEECCCCCEEEEEeC
Confidence 31 1212 33332 45665555543
No 159
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.34 E-value=0.00012 Score=64.28 Aligned_cols=136 Identities=18% Similarity=0.228 Sum_probs=86.5
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEE--EEE-----------EcCCCCCeeEEEeecCCcceEEEEeCCCC
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWL--HFA-----------RTSPNRNHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~--~~~-----------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
.-.++++.||+. ++++..+|.|..|+.+. +... .+. ..++++.++. .+...+.|..+|..++
T Consensus 84 ~v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~---sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 84 GVADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAV---SGSKDICIKVWDLAQQ 159 (344)
T ss_dssp CEEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEE---EEETTSCEEEEETTTT
T ss_pred CEEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEE---EEeCCCeEEEEECCCC
Confidence 356799999976 77888999999888643 2111 111 1123333332 3445678888898877
Q ss_pred eEEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eCC-CCCCceEEcCCC-CEEEEEecCC
Q 024436 101 QVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLP-GFPDNIKRSPRG-GFWVGIHSRR 176 (268)
Q Consensus 101 ~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l~-g~Pdgia~d~dG-~l~va~~~~~ 176 (268)
+..... .+-..-+.++|+|+++.++++.+..+.|..|++..++. ...+. ... ..+..+++.+++ +++++....+
T Consensus 160 ~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 160 VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce--eeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 765444 34455689999999977888888889999999875321 12221 111 235678888854 6766555444
No 160
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.34 E-value=0.00021 Score=62.94 Aligned_cols=175 Identities=8% Similarity=-0.034 Sum_probs=96.7
Q ss_pred cceEEECCCCCEEEEEe--CCCeEEEEeCCCCe-EEEEEE--------cCCCCCeeEEEeecCCcceEEEEeCCCCeEEE
Q 024436 36 PESLAFDALGEGPYTGV--SDGRIIKWHQDQRR-WLHFAR--------TSPNRNHISVILSGDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~--~~g~I~~~~~~g~~-~~~~~~--------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 104 (268)
...++|+|||++++++. .++.|..|+..... ...+.. .+|++.++... ..+.+.+++..+++...
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~----s~~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYI----TGSSLEVISTVTGSCIA 211 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEE----CSSCEEEEETTTCCEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEec----cceeEEEEEeccCccee
Confidence 45799999999887654 47888888876442 222211 12333333211 23456666655554332
Q ss_pred ee---cCCCCcceEEEccCCCEEEEEecCCc---EEEEEEccCCCCCceeEEEeCC---CCCCceEEcCCCCEEEEEecC
Q 024436 105 LL---GNLSFPNGVALSEDGNYILLAETTSC---RILRYWLKTSKAGTIEIVAQLP---GFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 105 ~~---~~~~~pnGia~spdg~~lyva~~~~~---~I~~~~~~~~~~g~~~~~~~l~---g~Pdgia~d~dG~l~va~~~~ 175 (268)
.. ..-...+.++|+|||+.++.+..... .++.|+....... ......+. .....++++|||+++++....
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D 290 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS-VLRSKQVTNRFKGITSMDVDMKGELAVLASND 290 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE-EEEEEEEESSCSCEEEEEECTTSCEEEEEETT
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec-ceeeeeecCCCCCeEeEEECCCCCceEEEcCC
Confidence 21 12233578999999987766543332 5667776532110 11111121 234578999999987766555
Q ss_pred CCcceeeeEeeC-ccceeeeeccccceeeeeeccccCCCcEEEEEECCCCCEEEEEE
Q 024436 176 RKGISKLVLSFP-WIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISEQGNVLEILE 231 (268)
Q Consensus 176 ~~~~~~~v~~~~-~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 231 (268)
+. |..+. .+++.+..+..+ .... ..-+.++|||+.+.+-.
T Consensus 291 ~~-----V~iwd~~~~~~~~~~~~g----------H~~~-V~~v~fSpdg~~laS~S 331 (365)
T 4h5i_A 291 NS-----IALVKLKDLSMSKIFKQA----------HSFA-ITEVTISPDSTYVASVS 331 (365)
T ss_dssp SC-----EEEEETTTTEEEEEETTS----------SSSC-EEEEEECTTSCEEEEEE
T ss_pred CE-----EEEEECCCCcEEEEecCc----------ccCC-EEEEEECCCCCEEEEEe
Confidence 43 44443 456666554322 1222 45677777777766654
No 161
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.33 E-value=0.00011 Score=64.69 Aligned_cols=136 Identities=13% Similarity=0.231 Sum_probs=85.4
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCC-------C-e------e-EEEeecCC--cc--eEEEEeCCCCeE
Q 024436 42 DALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNR-------N-H------I-SVILSGDK--TG--RLMKYDPATKQV 102 (268)
Q Consensus 42 ~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~-------~-~------~-~~~~~~~~--~g--~v~~~d~~~~~~ 102 (268)
+|...+++.....+.+..++.+|+.+..+. .++ + + + ..+.+... .+ ++|.+||+++++
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl~G~~l~~~~---~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSLDGKMLHSYN---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEETTSCEEEEEC---CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred CCCccEEEEEcCCCCEEEEcCCCcEEEEcc---CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 445565555556678888888887543321 111 0 1 0 12334444 45 557779888877
Q ss_pred EEee-------cCCCCcceEEE--ccC-CC-EEEEEecCCcEEEEEEccCCCCC--ceeEEEe--CCCCCCceEEcCC-C
Q 024436 103 TVLL-------GNLSFPNGVAL--SED-GN-YILLAETTSCRILRYWLKTSKAG--TIEIVAQ--LPGFPDNIKRSPR-G 166 (268)
Q Consensus 103 ~~~~-------~~~~~pnGia~--spd-g~-~lyva~~~~~~I~~~~~~~~~~g--~~~~~~~--l~g~Pdgia~d~d-G 166 (268)
+.+. ..+..|.|+++ +|+ ++ ++||++.. +++..|++.....+ ..+.+.+ +++.|.|+++|++ |
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g 192 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYG 192 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTT
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCC
Confidence 7662 34578999999 775 43 68888765 89999888421111 2233333 5678999999974 6
Q ss_pred CEEEEEecCCCcceeeeEeeC
Q 024436 167 GFWVGIHSRRKGISKLVLSFP 187 (268)
Q Consensus 167 ~l~va~~~~~~~~~~~v~~~~ 187 (268)
.||++....+ |++|.
T Consensus 193 ~Lyv~eEd~G------Iw~~d 207 (355)
T 3amr_A 193 RLYIAEEDEA------IWKFS 207 (355)
T ss_dssp EEEEEETTTE------EEEEE
T ss_pred eEEEecccce------EEEEe
Confidence 8999998854 55554
No 162
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.33 E-value=0.0014 Score=58.01 Aligned_cols=150 Identities=15% Similarity=0.180 Sum_probs=90.3
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeC-CCCeEEEEE---------------------------EcCCCCCeeEEEee
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQ-DQRRWLHFA---------------------------RTSPNRNHISVILS 85 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~-~g~~~~~~~---------------------------~~~~~~~~~~~~~~ 85 (268)
....+++++|||++++++. ++.+..++. +|+....+. ..++++.++ ..
T Consensus 65 ~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l---~s 140 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL---AT 140 (393)
T ss_dssp SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE---EE
T ss_pred CEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE---EE
Confidence 3568999999999888765 566766664 333222111 011222222 23
Q ss_pred cCCcceEEEEeCCCCeEEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcC
Q 024436 86 GDKTGRLMKYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP 164 (268)
Q Consensus 86 ~~~~g~v~~~d~~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~ 164 (268)
+..++.|..+|.++++..... ..-...+.++|+||++.|+ +.+..+.|..|++..+. .............+++.+
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~~---~~~~~~~~~~v~~~~~~~ 216 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTGQ---CSLTLSIEDGVTTVAVSP 216 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE---EEEEEECSSCEEEEEECS
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCCe---eEEEEEcCCCcEEEEEEC
Confidence 345678888888877665444 3444568999999998664 56678999999987532 111122333456788888
Q ss_pred -CCCEEEEEecCCCcceeeeEeeC-ccceeeeec
Q 024436 165 -RGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKL 196 (268)
Q Consensus 165 -dG~l~va~~~~~~~~~~~v~~~~-~~g~~l~~i 196 (268)
+|+++++....+. |..+. ..++.+..+
T Consensus 217 ~~~~~l~~~s~d~~-----v~iwd~~~~~~~~~~ 245 (393)
T 1erj_A 217 GDGKYIAAGSLDRA-----VRVWDSETGFLVERL 245 (393)
T ss_dssp TTCCEEEEEETTSC-----EEEEETTTCCEEEEE
T ss_pred CCCCEEEEEcCCCc-----EEEEECCCCcEEEee
Confidence 7887776655543 33332 345555444
No 163
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.32 E-value=0.00066 Score=58.80 Aligned_cols=148 Identities=13% Similarity=0.073 Sum_probs=93.1
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCC----eE-EEEEEcCCCCC----ee--EEEeecCCcceE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR----RW-LHFARTSPNRN----HI--SVILSGDKTGRL 92 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~----~~-~~~~~~~~~~~----~~--~~~~~~~~~g~v 92 (268)
.+..++... .....++++|+|++++++..++.|..++.... .. ..+... .+.- +. ..++.....+.|
T Consensus 89 ~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~l~s~s~d~~i 166 (340)
T 1got_B 89 KVHAIPLRS-SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGH-TGYLSCCRFLDDNQIVTSSGDTTC 166 (340)
T ss_dssp EEEEEECSS-SCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECC-SSCEEEEEEEETTEEEEEETTSCE
T ss_pred cceEeecCC-ccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCC-CccEEEEEECCCCcEEEEECCCcE
Confidence 445555442 35678999999999999999999988886432 11 111110 0000 00 012334456788
Q ss_pred EEEeCCCCeEEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEE
Q 024436 93 MKYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVG 171 (268)
Q Consensus 93 ~~~d~~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va 171 (268)
..+|..+++..... ..-...+.++|+|+++ ++++.+..+.|..|++..+. ....+..-......+++.|+|+++++
T Consensus 167 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~s 243 (340)
T 1got_B 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGM--CRQTFTGHESDINAICFFPNGNAFAT 243 (340)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCS--EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCcEEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe--eEEEEcCCcCCEEEEEEcCCCCEEEE
Confidence 88898877655443 3344568999999997 55677788999999987432 12222222234668999999997777
Q ss_pred EecCC
Q 024436 172 IHSRR 176 (268)
Q Consensus 172 ~~~~~ 176 (268)
....+
T Consensus 244 ~s~d~ 248 (340)
T 1got_B 244 GSDDA 248 (340)
T ss_dssp EETTS
T ss_pred EcCCC
Confidence 66554
No 164
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.30 E-value=0.00042 Score=61.89 Aligned_cols=136 Identities=10% Similarity=0.093 Sum_probs=87.5
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCCeEEE
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 104 (268)
....++++|++.+++++..|+.|..|+... +....+. ...+++.++ ..+..++.|..+|..+++...
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l---~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL---ASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEE---EEEETTSCCCEEETTSSCEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEE---EEEeCCCeEEEEeCCCCceeE
Confidence 567899999999999999999999998653 2212211 112333322 233445667777777655433
Q ss_pred -eecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 105 -LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 105 -~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
+...-...+.++|+|+++.| ++.+..+.|..|++..+. ....+..-......++++++|+++++....+
T Consensus 187 ~~~~h~~~V~~v~~~p~~~~l-~s~s~D~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 187 TMHGHDHNVSSVSIMPNGDHI-VSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp CCCCCSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEcCCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCc--EEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 33444556889999999855 566678999999987532 1222322222355678889998777766554
No 165
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.30 E-value=0.00068 Score=60.01 Aligned_cols=135 Identities=20% Similarity=0.170 Sum_probs=88.1
Q ss_pred cceEEECCCCCEEEEEeCCCeEEEEeCCCCeEE-EEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCCeEEEe
Q 024436 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWL-HFA---------RTSPNRNHISVILSGDKTGRLMKYDPATKQVTVL 105 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~-~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 105 (268)
..+++++|||++++++..|+.|..|+....... .+. ...+++.++ +....++.|..+|..+++....
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l---~s~s~d~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL---VSGSGDRTVRIWDLRTGQCSLT 202 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE---EEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEE---EEecCCCcEEEEECCCCeeEEE
Confidence 468999999999999999999999997654322 111 112233322 2334567888899887776555
Q ss_pred ecCCCCcceEEEcc-CCCEEEEEecCCcEEEEEEccCCCCCceeEEEe----C---CCCCCceEEcCCCCEEEEEecCC
Q 024436 106 LGNLSFPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ----L---PGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 106 ~~~~~~pnGia~sp-dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~----l---~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
.........++++| ||+ ++++.+..+.|..|++..+.. ...+.. . ......++++++|+++++....+
T Consensus 203 ~~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 203 LSIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp EECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 54445567899999 787 445666788999999875321 111110 0 12345789999998776665544
No 166
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.30 E-value=0.00014 Score=70.10 Aligned_cols=138 Identities=13% Similarity=0.127 Sum_probs=90.2
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEEEc---------CCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFART---------SPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~~~---------~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
....+++++|+|++++++..+|.|..|+.. ++....+... +++++++. .....|.|..+|..+++..
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~---~~~~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWII---VGSDDFRIRVFNYNTGEKV 90 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEE---EEETTSEEEEEETTTCCEE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEE---EEeCCCeEEEEECCCCcEE
Confidence 468999999999999999999999999964 3332222211 12222222 2335688888988777654
Q ss_pred -EeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcC-CCCEEEEEecCC
Q 024436 104 -VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP-RGGFWVGIHSRR 176 (268)
Q Consensus 104 -~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~-dG~l~va~~~~~ 176 (268)
.+.........++|+||++.|++ .+..+.|..|+++.+. .....+....+....+++.| +|+++++....+
T Consensus 91 ~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 91 VDFEAHPDYIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEE-EETTSEEEEEEGGGTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred EEEecCCCCEEEEEEeCCCCEEEE-EcCCCEEEEEECCCCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC
Confidence 34445556789999999987664 4567899999997531 11122222234467889998 777666555544
No 167
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.28 E-value=6.6e-05 Score=65.96 Aligned_cols=138 Identities=18% Similarity=0.161 Sum_probs=82.2
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeE--EEEE-----------EcCCCCCeeEEEeecCCcceEEEEeCCCC
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRW--LHFA-----------RTSPNRNHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~--~~~~-----------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
.-.++++.|+++ ++++..+|.|..|+... +.. ..+. ...+++.++ ......+.|..+|..++
T Consensus 96 ~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l---~sgs~dg~v~iwd~~~~ 171 (357)
T 4g56_B 96 GVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQA---VSGGKDFSVKVWDLSQK 171 (357)
T ss_dssp CEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEE---EEEETTSCEEEEETTTT
T ss_pred CEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEE---EEEeCCCeEEEEECCCC
Confidence 457899999998 55667789988876532 110 0010 112333333 23345678888998877
Q ss_pred eEEEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCC-CEEEEEecCC
Q 024436 101 QVTVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRG-GFWVGIHSRR 176 (268)
Q Consensus 101 ~~~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG-~l~va~~~~~ 176 (268)
+..... ..-...+.++|+|+++.++++....+.|..|++..++......+......+..+++.|++ +++++....+
T Consensus 172 ~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~ 249 (357)
T 4g56_B 172 AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG 249 (357)
T ss_dssp EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS
T ss_pred cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc
Confidence 765444 344556899999998777788888899999998743211111111112346678888875 5655544433
No 168
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=0.00023 Score=69.05 Aligned_cols=213 Identities=14% Similarity=0.148 Sum_probs=118.1
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCeeEEEeec--------CCcceEEEEeCCCCeEEEee
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNHISVILSG--------DKTGRLMKYDPATKQVTVLL 106 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~g~v~~~d~~~~~~~~~~ 106 (268)
...+++.+++|+ ++++...+.+.++++....+..+.........+..+.++ .. +.|+++|+++++.+...
T Consensus 408 ~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 408 SVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp BEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEE
T ss_pred ceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecc
Confidence 456788899998 555666678889988654443332110011112211111 11 46889999877665543
Q ss_pred cC------CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCC----CceEEcCCCCEEEEEecCC
Q 024436 107 GN------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFP----DNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 107 ~~------~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~P----dgia~d~dG~l~va~~~~~ 176 (268)
.. ....+.|+.+++|+ ||++... +.|++|+.++. ....+....+.| ..|+.|++|+||++.. .+
T Consensus 486 ~~~~~~~~~~~i~~i~~d~~g~-lWigt~~-~Gl~~~~~~~~---~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~G 559 (781)
T 3v9f_A 486 DTSNSQLLENFVRSIAQDSEGR-FWIGTFG-GGVGIYTPDMQ---LVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EG 559 (781)
T ss_dssp CTTTSSCSCSCEEEEEECTTCC-EEEEESS-SCEEEECTTCC---EEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TE
T ss_pred cCcccccccceeEEEEEcCCCC-EEEEEcC-CCEEEEeCCCC---eEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CC
Confidence 21 24567899999996 8888643 45888887642 233332222333 4688899999999987 32
Q ss_pred Ccceeee-EeeCccceeeeeccc----cceeeeeeccc-------cCCCcEEEEEECCCCCEEEEEEcCCCCceec---e
Q 024436 177 KGISKLV-LSFPWIGNVLIKLPI----DIVKIHSSLVK-------LSGNGGMAMRISEQGNVLEILEEIGRKMWRS---I 241 (268)
Q Consensus 177 ~~~~~~v-~~~~~~g~~l~~i~~----~~~~~~~~~~~-------~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~---~ 241 (268)
+ .++.+....+..+.. +...+.+++.. .... | +.+++++.+.+..+...+|-.... -
T Consensus 560 ------lv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~-G-l~~~~~~~~~~~~~~~~dGl~~~~f~~~ 631 (781)
T 3v9f_A 560 ------LVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNT-G-ISCYITSKKCFYTYDHSNNIPQGSFISG 631 (781)
T ss_dssp ------EEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECSS-C-EEEEETTTTEEEEECGGGTCCSSCEEEE
T ss_pred ------ceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcCC-c-eEEEECCCCceEEecccCCccccccccC
Confidence 3 555433222222211 11111111110 1122 3 567888777777776666532221 2
Q ss_pred EEEEEeCCEEEEeeCCCCeEEEEe
Q 024436 242 SEVEEKDGNLWIGSVNMPYAGLYN 265 (268)
Q Consensus 242 s~~~~~~g~Lyv~s~~~~~v~~~~ 265 (268)
+.+...+|+||+|+..+ +.+++
T Consensus 632 ~~~~~~~G~l~~g~~~G--l~~f~ 653 (781)
T 3v9f_A 632 CVTKDHNGLIYFGSING--LCFFN 653 (781)
T ss_dssp EEEECTTSCEEEEETTE--EEEEC
T ss_pred ceEECCCCEEEEECCCc--eEEEC
Confidence 23334579999999764 55554
No 169
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.26 E-value=0.00023 Score=68.07 Aligned_cols=82 Identities=11% Similarity=0.106 Sum_probs=53.2
Q ss_pred eEEEEeCCC-CeEEEeec---CCCCcceEEEccCCCEEEEEec----CCcEEEEEEccCCCCCceeEEEe-CCC---CCC
Q 024436 91 RLMKYDPAT-KQVTVLLG---NLSFPNGVALSEDGNYILLAET----TSCRILRYWLKTSKAGTIEIVAQ-LPG---FPD 158 (268)
Q Consensus 91 ~v~~~d~~~-~~~~~~~~---~~~~pnGia~spdg~~lyva~~----~~~~I~~~~~~~~~~g~~~~~~~-l~g---~Pd 158 (268)
.|+.+|.++ ++.+.+.. .......++| |||++|+++.. ....|+.++++++.. ...+.. ..+ ...
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ--RVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE--EEEEEEECSSCCCCCS
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce--EEEEEcCCCCcCCcCC
Confidence 788999887 77665542 2344578999 99999988754 245889999875431 122221 111 235
Q ss_pred ceEEcCCCCEEEEEecC
Q 024436 159 NIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 159 gia~d~dG~l~va~~~~ 175 (268)
.+++.+||+++++....
T Consensus 341 ~~~~spdg~~~~~~~~~ 357 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERT 357 (741)
T ss_dssp CCEECTTSCEEEEECTT
T ss_pred ceEECCCCeEEEEecCC
Confidence 89999999965554433
No 170
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.25 E-value=0.0003 Score=61.66 Aligned_cols=136 Identities=13% Similarity=0.041 Sum_probs=82.8
Q ss_pred CCcceEEECCCCC-EEEEEeCCCeEEEEeC----CCCe-------EEEEEE-------------------cCCCCCeeEE
Q 024436 34 IGPESLAFDALGE-GPYTGVSDGRIIKWHQ----DQRR-------WLHFAR-------------------TSPNRNHISV 82 (268)
Q Consensus 34 ~~P~gia~~~dG~-~l~~~~~~g~I~~~~~----~g~~-------~~~~~~-------------------~~~~~~~~~~ 82 (268)
....+++++|+|+ +++++..++.|..|+. .... ...+.. ..+++.++.
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~- 124 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIV- 124 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEE-
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEE-
Confidence 4688999999999 9999999999998876 4322 111111 012222222
Q ss_pred EeecCCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCC------
Q 024436 83 ILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGF------ 156 (268)
Q Consensus 83 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~------ 156 (268)
....++.|..+|.+...+..+.........++|+|+++.|+++ ...+.|..|++..+.. ...+......
T Consensus 125 --~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 125 --TGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISM-DVENVTILWNVISGTV--MQHFELKETGGSSINA 199 (425)
T ss_dssp --EEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEE-ETTCCEEEEETTTTEE--EEEECCC---------
T ss_pred --EEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEE-ecCCeEEEEECCCCcE--EEEeeccccCccceee
Confidence 2334577888886544444455455667899999999977655 4578899999874321 1111111111
Q ss_pred ---------CCceEEcCCCCEEEEEecC
Q 024436 157 ---------PDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 157 ---------Pdgia~d~dG~l~va~~~~ 175 (268)
...+++.+++.++++...+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g 227 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDKFVIPGPKG 227 (425)
T ss_dssp ------CCCBSCCEEEETTEEEEECGGG
T ss_pred ccccCCcceeeEEEEcCCCEEEEEcCCC
Confidence 6678888877766655544
No 171
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.24 E-value=0.00029 Score=60.16 Aligned_cols=148 Identities=11% Similarity=0.090 Sum_probs=91.4
Q ss_pred cceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCC--Cee----EEEeecCCcceEEEEeCCCCeEE-EeecC
Q 024436 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNR--NHI----SVILSGDKTGRLMKYDPATKQVT-VLLGN 108 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~--~~~----~~~~~~~~~g~v~~~d~~~~~~~-~~~~~ 108 (268)
...++++++|. ++++..++.|++++++|+....+....+.- ... ..++. . +.|+++|++ ++.. .....
T Consensus 139 ~~~~~~~~~g~-l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d~~-g~~~~~~~~~ 213 (330)
T 3hxj_A 139 YATPIVSEDGT-IYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAINPD-GTEKWNFYAG 213 (330)
T ss_dssp CSCCEECTTSC-EEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEECTT-SCEEEEECCS
T ss_pred eeeeEEcCCCE-EEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEECCC-CcEEEEEccC
Confidence 45678888998 566677899999999866422222111100 000 01112 2 789999954 5433 23333
Q ss_pred CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCCCcceeeeEeeCc
Q 024436 109 LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPW 188 (268)
Q Consensus 109 ~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~~ 188 (268)
....+.++++++|+ ||++.. .+.|++++.++.. ...+......+..+++|++|+||++...++ +.++.+
T Consensus 214 ~~~~~~~~~~~~g~-l~v~t~-~~gl~~~~~~g~~---~~~~~~~~~~~~~~~~~~~g~l~v~t~~gg------l~~~d~ 282 (330)
T 3hxj_A 214 YWTVTRPAISEDGT-IYVTSL-DGHLYAINPDGTE---KWRFKTGKRIESSPVIGNTDTIYFGSYDGH------LYAINP 282 (330)
T ss_dssp SCCCSCCEECTTSC-EEEEET-TTEEEEECTTSCE---EEEEECSSCCCSCCEECTTSCEEEECTTCE------EEEECT
T ss_pred CcceeceEECCCCe-EEEEcC-CCeEEEECCCCCE---eEEeeCCCCccccceEcCCCeEEEecCCCC------EEEECC
Confidence 35577899999985 888754 5788999754421 122222223466789999999999987654 666666
Q ss_pred cceeeeecccc
Q 024436 189 IGNVLIKLPID 199 (268)
Q Consensus 189 ~g~~l~~i~~~ 199 (268)
+|+.+.....+
T Consensus 283 ~g~~~~~~~~~ 293 (330)
T 3hxj_A 283 DGTEKWNFETG 293 (330)
T ss_dssp TSCEEEEEECS
T ss_pred CCcEEEEEEcC
Confidence 78877665543
No 172
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.24 E-value=0.00032 Score=60.56 Aligned_cols=166 Identities=10% Similarity=0.017 Sum_probs=94.4
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE------------cCCCCCeeEEEeecCCcce
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR------------TSPNRNHISVILSGDKTGR 91 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~g~ 91 (268)
.+..+.-. -....+++++|+|++++++..++.|..|+.....+..... ..+++.++. ....++.
T Consensus 44 ~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~~~~d~~ 119 (372)
T 1k8k_C 44 QVHELKEH-NGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFA---VGSGSRV 119 (372)
T ss_dssp EEEEEECC-SSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEE---EEETTSS
T ss_pred eeeeecCC-CCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEE---EEeCCCE
Confidence 34444422 3467899999999999999999999988865432221111 122223222 2223455
Q ss_pred EEEEeCCCCe----EEEeec-CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCC-------------CCceeEEEeC
Q 024436 92 LMKYDPATKQ----VTVLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSK-------------AGTIEIVAQL 153 (268)
Q Consensus 92 v~~~d~~~~~----~~~~~~-~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~-------------~g~~~~~~~l 153 (268)
|..+|.++++ ...... .....+.++|+|+++.|+ +.+..+.|..|++.... .........+
T Consensus 120 v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (372)
T 1k8k_C 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA-AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 198 (372)
T ss_dssp EEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE-EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC
T ss_pred EEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE-EEcCCCCEEEEEcccccccccccccccccccchhhheEec
Confidence 5444444333 222222 245568999999998665 45567899999964210 0011222222
Q ss_pred ---CCCCCceEEcCCCCEEEEEecCCCcceeeeEeeC-ccceeeeecccc
Q 024436 154 ---PGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPID 199 (268)
Q Consensus 154 ---~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~-~~g~~l~~i~~~ 199 (268)
.+....++++++|+++++....+. |..+. ..++.+..+...
T Consensus 199 ~~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 199 SSSCGWVHGVCFSANGSRVAWVSHDST-----VCLADADKKMAVATLASE 243 (372)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTTE-----EEEEEGGGTTEEEEEECS
T ss_pred CCCCCeEEEEEECCCCCEEEEEeCCCE-----EEEEECCCCceeEEEccC
Confidence 234678999999986666555542 44443 356666555443
No 173
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.24 E-value=0.00046 Score=59.79 Aligned_cols=140 Identities=16% Similarity=0.089 Sum_probs=86.9
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE------------EcCCCC-------CeeEEEeecCCcceEEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFA------------RTSPNR-------NHISVILSGDKTGRLMK 94 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~------------~~~~~~-------~~~~~~~~~~~~g~v~~ 94 (268)
....+++++|+|+.++++..|+.|..|+..+....... ...+.. ++...+.....++.|..
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 198 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKV 198 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEE
Confidence 45788999999999999999999999987654221111 011111 00011223345678888
Q ss_pred EeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEec
Q 024436 95 YDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHS 174 (268)
Q Consensus 95 ~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~ 174 (268)
+|........+...-...+.++|+|||++| ++.+..+.|..|++..... ....+. .......++++|++.+..+...
T Consensus 199 wd~~~~~~~~~~~h~~~v~~~~~s~~g~~l-~sgs~dg~v~iwd~~~~~~-~~~~~~-~~~~v~~v~~sp~~~~la~~~d 275 (343)
T 2xzm_R 199 WNTNFQIRYTFKAHESNVNHLSISPNGKYI-ATGGKDKKLLIWDILNLTY-PQREFD-AGSTINQIAFNPKLQWVAVGTD 275 (343)
T ss_dssp EETTTEEEEEEECCSSCEEEEEECTTSSEE-EEEETTCEEEEEESSCCSS-CSEEEE-CSSCEEEEEECSSSCEEEEEES
T ss_pred EcCCCceeEEEcCccccceEEEECCCCCEE-EEEcCCCeEEEEECCCCcc-cceeec-CCCcEEEEEECCCCCEEEEECC
Confidence 886533333344444567899999999855 5666789999999843211 112221 2224678999999987665554
Q ss_pred CC
Q 024436 175 RR 176 (268)
Q Consensus 175 ~~ 176 (268)
..
T Consensus 276 ~~ 277 (343)
T 2xzm_R 276 QG 277 (343)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 174
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.23 E-value=0.0017 Score=55.04 Aligned_cols=137 Identities=15% Similarity=0.176 Sum_probs=88.0
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
....+++++|+|++++++..++.|..|+... +....+.. ..++.+++ ..+..++.|..+|..+++..
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~s~~~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRIWDVKTGKCL 142 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE---EEEETTSCEEEEETTTCCEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE---EEEeCCCcEEEEECCCCEEE
Confidence 4678899999999999999999999998753 32222211 12222322 23345678888998876654
Q ss_pred Eee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC-CCCCCceEEcCCCCEEEEEecCC
Q 024436 104 VLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-PGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 104 ~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l-~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
... ........++|+|+++.|+ +.+..+.|..|++..+. ....+... ......++++++|+++++....+
T Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 214 (312)
T 4ery_A 143 KTLPAHSDPVSAVHFNRDGSLIV-SSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 214 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTCC--EEEEECCSSCCCEEEEEECTTSSEEEEEETTT
T ss_pred EEecCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCc--eeeEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 333 3334457899999998554 55677899999987432 11222111 12235689999998777665554
No 175
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.23 E-value=0.0006 Score=58.78 Aligned_cols=139 Identities=12% Similarity=0.060 Sum_probs=85.0
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc------------CCC--CCeeEEEeecCCcceEEEEeCCC
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART------------SPN--RNHISVILSGDKTGRLMKYDPAT 99 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~------------~~~--~~~~~~~~~~~~~g~v~~~d~~~ 99 (268)
....+++++|+|++++++..+|.|..|+.++......... .+. ..++ .....++.|..+|..+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l---~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTIL---ASCSYDGKVLIWKEEN 88 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE---EEEETTSCEEEEEEET
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEE---EEeccCCEEEEEEcCC
Confidence 4678999999999999999999999887653221111111 111 2222 2333456777777766
Q ss_pred CeE---EEeecCCCCcceEEEccC--CCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcC----------
Q 024436 100 KQV---TVLLGNLSFPNGVALSED--GNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP---------- 164 (268)
Q Consensus 100 ~~~---~~~~~~~~~pnGia~spd--g~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~---------- 164 (268)
++. ..+.........++|+|+ ++.|+ +-+..+.|..|++..........+.........+++.+
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 167 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLL-VASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 167 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--------
T ss_pred CceeEeeeecCCCcceEEEEeCCCCCCCEEE-EecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccccc
Confidence 652 223334456789999999 87555 45677899999997542212222222223356777887
Q ss_pred ---CCCEEEEEecCC
Q 024436 165 ---RGGFWVGIHSRR 176 (268)
Q Consensus 165 ---dG~l~va~~~~~ 176 (268)
+++++++....+
T Consensus 168 ~~~~~~~l~~~~~dg 182 (379)
T 3jrp_A 168 GTKESRKFVTGGADN 182 (379)
T ss_dssp --CTTCEEEEEETTS
T ss_pred CCCCCCEEEEEeCCC
Confidence 687766665554
No 176
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.21 E-value=0.00054 Score=60.45 Aligned_cols=213 Identities=15% Similarity=0.124 Sum_probs=117.3
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE----------EcCCCCCeeEEEeecCCcceEEEEeCCCCeE-EEeec
Q 024436 39 LAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFA----------RTSPNRNHISVILSGDKTGRLMKYDPATKQV-TVLLG 107 (268)
Q Consensus 39 ia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~-~~~~~ 107 (268)
.++.++|++++++..++.|..|+.......... ...+++.++ .....++.|..+|..+++. ..+..
T Consensus 103 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l---~s~s~d~~i~iwd~~~~~~~~~~~~ 179 (420)
T 3vl1_A 103 DTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEAL---ISSSQDMQLKIWSVKDGSNPRTLIG 179 (420)
T ss_dssp EEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEE---EEEETTSEEEEEETTTCCCCEEEEC
T ss_pred EEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEE---EEEeCCCeEEEEeCCCCcCceEEcC
Confidence 367899999999999999999987654322210 112233322 2334567888888876654 34444
Q ss_pred CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC------------------------CCCCCceEEc
Q 024436 108 NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL------------------------PGFPDNIKRS 163 (268)
Q Consensus 108 ~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l------------------------~g~Pdgia~d 163 (268)
.....+.++|+||++.|+ +.+..+.|..|++..+.. ...+... ......++++
T Consensus 180 h~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 180 HRATVTDIAIIDRGRNVL-SASLDGTIRLWECGTGTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp CSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTTEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred CCCcEEEEEEcCCCCEEE-EEcCCCcEEEeECCCCce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 555678999999998665 556778899999874321 1111100 1234567888
Q ss_pred CCCCEEEEEecCCCcceeeeEeeC-ccceeeeeccccc-eeeeeeccccCCCcE-EEEEECCCCC-----------EEEE
Q 024436 164 PRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPIDI-VKIHSSLVKLSGNGG-MAMRISEQGN-----------VLEI 229 (268)
Q Consensus 164 ~dG~l~va~~~~~~~~~~~v~~~~-~~g~~l~~i~~~~-~~~~~~~~~~~~~~~-~~~~~~~~G~-----------~~~~ 229 (268)
++|+++++....+. |..+. ..++.+..+.... ..+.++. ..+... .++.-+.+|. ++..
T Consensus 257 ~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~ 329 (420)
T 3vl1_A 257 TYGKYVIAGHVSGV-----ITVHNVFSKEQTIQLPSKFTCSCNSLT--VDGNNANYIYAGYENGMLAQWDLRSPECPVGE 329 (420)
T ss_dssp CTTEEEEEEETTSC-----EEEEETTTCCEEEEECCTTSSCEEEEE--ECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred CCCCEEEEEcCCCe-----EEEEECCCCceeEEcccccCCCceeEE--EeCCCCCEEEEEeCCCeEEEEEcCCCcCchhh
Confidence 99987666655543 33332 3455444443321 1122211 011101 2333332332 2233
Q ss_pred EEcCCCCceeceEEEEEeCCEEEEeeCCCCeEEEEeCC
Q 024436 230 LEEIGRKMWRSISEVEEKDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 230 ~~~~~g~~~~~~s~~~~~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
+....+ ..++.+...+++++++...+..|.+.+++
T Consensus 330 ~~~~~~---~~v~~~~~~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 330 FLINEG---TPINNVYFAAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp EEESTT---SCEEEEEEETTEEEEEETTTEEEEEEEEC
T ss_pred hhccCC---CCceEEEeCCCCEEEEecCCccEEEEecc
Confidence 322111 12444555678877777778888777653
No 177
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.21 E-value=0.0003 Score=60.90 Aligned_cols=201 Identities=10% Similarity=0.058 Sum_probs=107.8
Q ss_pred CCCCEEEEEe--CCCeEEEEeCCCCeEEEEEE-----cCCCCCeeEEEeecC-----------CcceEEEEeCCCCeEEE
Q 024436 43 ALGEGPYTGV--SDGRIIKWHQDQRRWLHFAR-----TSPNRNHISVILSGD-----------KTGRLMKYDPATKQVTV 104 (268)
Q Consensus 43 ~dG~~l~~~~--~~g~I~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~-----------~~g~v~~~d~~~~~~~~ 104 (268)
.+|+.+|... ++++|++++.+|.....+.. ..+.+.|+.=.-... ....|++++.++++.+.
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~ 102 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV 102 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE
Confidence 4555555544 36999999999863222211 122233332111111 24689999999776666
Q ss_pred eecCCCCcceEEEccCCCEEEEEe---cCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-EEEEEecCCCcce
Q 024436 105 LLGNLSFPNGVALSEDGNYILLAE---TTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRRKGIS 180 (268)
Q Consensus 105 ~~~~~~~pnGia~spdg~~lyva~---~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l~va~~~~~~~~~ 180 (268)
+.... +.+++++|++||+++ .....|++.+++|.. .+.+..-.. ++++++|+ ||.+..+.. .
T Consensus 103 l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~---~~~lt~~~~----~~~~~~g~~iy~t~~g~~-~-- 168 (302)
T 3s25_A 103 LDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE---KKKIKNHYL----FTCNTSDRYFYYNNPKNG-Q-- 168 (302)
T ss_dssp EECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC---CEEEESSCC----CCSEEETTEEEEECTTTC-C--
T ss_pred eecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC---eEEEeCCCc----eEeeEECCEEEEEeCCCc-e--
Confidence 65442 458899999999998 677899999999742 344433221 34455553 555444222 2
Q ss_pred eeeEeeCccceeeeecccc-ceeeee-------eccccCCCcEEEEEECCCCCEEEEEEcCCCCceeceEEEEEeCCEEE
Q 024436 181 KLVLSFPWIGNVLIKLPID-IVKIHS-------SLVKLSGNGGMAMRISEQGNVLEILEEIGRKMWRSISEVEEKDGNLW 252 (268)
Q Consensus 181 ~~v~~~~~~g~~l~~i~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~~s~~~~~~g~Ly 252 (268)
|.+.+..|.-..++... ...+.. ....... ..+.+.+.+|.-..++.+. . ++ .+...+++||
T Consensus 169 --Iy~~~l~g~~~~~l~~~~~~~~~~P~g~~iy~t~~~~~--~~I~~~~ldG~~~~~Lt~~--~-~~---~~~~~g~~Iy 238 (302)
T 3s25_A 169 --LYRYDTASQSEALFYDCNCYKPVVLDDTNVYYMDVNRD--NAIVHVNINNPNPVVLTEA--N-IE---HYNVYGSLIF 238 (302)
T ss_dssp --EEEEETTTTEEEEEECSCEEEEEEEETTEEEEEEGGGT--TEEEEECSSSCCCEECSCS--C-EE---EEEEETTEEE
T ss_pred --EEEEECCCCCEEEEeCCCccceeeecCCEEEEEEcCCC--cEEEEEECCCCCeEEEeCC--C-cc---eEEECCCEEE
Confidence 32332222221121111 000000 0000011 2466777776655555431 1 22 3566788999
Q ss_pred Ee-eCCCCeEEEEeCC
Q 024436 253 IG-SVNMPYAGLYNYS 267 (268)
Q Consensus 253 v~-s~~~~~v~~~~~~ 267 (268)
.+ ....+.|.+++++
T Consensus 239 ~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 239 YQRGGDNPALCVVKND 254 (302)
T ss_dssp EEECSSSCEEEEEETT
T ss_pred EEECCCCcEEEEEECC
Confidence 86 4456888888765
No 178
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.21 E-value=0.0005 Score=61.94 Aligned_cols=88 Identities=14% Similarity=0.169 Sum_probs=53.2
Q ss_pred CcceEEEEeCC--CCeEEEee---cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCc--eeEEEeCCCCCCce
Q 024436 88 KTGRLMKYDPA--TKQVTVLL---GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT--IEIVAQLPGFPDNI 160 (268)
Q Consensus 88 ~~g~v~~~d~~--~~~~~~~~---~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~--~~~~~~l~g~Pdgi 160 (268)
..+.|..||.. +++..... .....++.++|+|||++|+++. ..+.|+.|++....... ...+..-.+....+
T Consensus 123 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 201 (450)
T 2vdu_B 123 SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIAD-KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDV 201 (450)
T ss_dssp GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEE
T ss_pred CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEe-CCCcEEEEecCCcccccccceeeecccCceEEE
Confidence 44556555554 45433332 2335578999999999887775 47889999987533211 11121112346778
Q ss_pred EEcCC---CCEEEEEecCC
Q 024436 161 KRSPR---GGFWVGIHSRR 176 (268)
Q Consensus 161 a~d~d---G~l~va~~~~~ 176 (268)
++.++ |+++++....+
T Consensus 202 ~~sp~~~~~~~l~s~~~d~ 220 (450)
T 2vdu_B 202 HLIKDSDGHQFIITSDRDE 220 (450)
T ss_dssp EEEECTTSCEEEEEEETTS
T ss_pred EEcCCCCCCcEEEEEcCCC
Confidence 99998 86666554443
No 179
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.21 E-value=0.00053 Score=64.55 Aligned_cols=155 Identities=11% Similarity=0.160 Sum_probs=94.3
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCC-CCe--EEEEE---------EcCCCCCeeEEEeec-CCcceEEEEeCCCC
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRR--WLHFA---------RTSPNRNHISVILSG-DKTGRLMKYDPATK 100 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~--~~~~~---------~~~~~~~~~~~~~~~-~~~g~v~~~d~~~~ 100 (268)
..-..++++|||++++++..|+.|..|+.. ++. ...+. ..++++.++.....+ ...+.|+.+|.. .
T Consensus 60 ~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~-~ 138 (611)
T 1nr0_A 60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG-T 138 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC-C
T ss_pred CceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC-C
Confidence 456789999999999999999999999863 221 11111 112333333322111 123577777753 2
Q ss_pred eEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCCCcce
Q 024436 101 QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGIS 180 (268)
Q Consensus 101 ~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~ 180 (268)
....+..+-...+.++|+|+++..+++.+..+.|..|+....+ ....+..-.+....+++.|||+++++....+.
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--~~~~l~~H~~~V~~v~fspdg~~las~s~D~~--- 213 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT--- 213 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSC---
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--EeeeeccccCceEEEEECCCCCEEEEEECCCc---
Confidence 2333444445668999999997667788888999999975311 01112111234568899999998777665553
Q ss_pred eeeEeeC-ccceeeeec
Q 024436 181 KLVLSFP-WIGNVLIKL 196 (268)
Q Consensus 181 ~~v~~~~-~~g~~l~~i 196 (268)
|..+. .+++.+..+
T Consensus 214 --i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 214 --IVLYNGVDGTKTGVF 228 (611)
T ss_dssp --EEEEETTTCCEEEEC
T ss_pred --EEEEECCCCcEeeee
Confidence 43343 445555444
No 180
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.20 E-value=8.3e-05 Score=64.86 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=80.3
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE------------EcCCCCCeeEEEeecCCcceEEEEeCCCCe-
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFA------------RTSPNRNHISVILSGDKTGRLMKYDPATKQ- 101 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~------------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~- 101 (268)
.-.+++++|+|++++++..++.|..|+.++..+.... ...++++++. ....++.|..+|..+++
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~---s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIV---TCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEE---EEETTSSEEEC------C
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEE---EEeCCCeEEEEEcCCCCc
Confidence 5788999999998888888888888876543111111 1123333332 22345677777776554
Q ss_pred ---EEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCC-CceeEEEe-CCCCCCceEEcCCCCEEEEEecCC
Q 024436 102 ---VTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKA-GTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 102 ---~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~-g~~~~~~~-l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
...+...-...+.++|+||++.|+.+ +..+.|..|+++.+.. .....+.. ..+....+++.++|+++++....+
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVG-SGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEE-ESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEE-ecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 33344445566899999999866544 5678899999875321 01222322 234467899999998766655544
No 181
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.20 E-value=0.00053 Score=60.91 Aligned_cols=65 Identities=20% Similarity=0.213 Sum_probs=41.4
Q ss_pred CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE----e---CCCCCCceEEcCCC-CEEEEEecCC
Q 024436 109 LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA----Q---LPGFPDNIKRSPRG-GFWVGIHSRR 176 (268)
Q Consensus 109 ~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~----~---l~g~Pdgia~d~dG-~l~va~~~~~ 176 (268)
-...+.++|+||++.|..+ ..+.|..|++.... .....+. . ..+....++++++| +++++....+
T Consensus 177 ~~~v~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg 249 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSA--DDLRINLWHLEITD-RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG 249 (447)
T ss_dssp SSCCCEEEECTTSSEEEEE--CSSEEEEEETTEEE-EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS
T ss_pred CcceEEEEEcCCCCEEEEe--CCCeEEEEECCCCC-ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC
Confidence 3446789999999866554 58999999987210 0011110 1 12346688999998 7777665554
No 182
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.19 E-value=0.00014 Score=63.97 Aligned_cols=155 Identities=14% Similarity=0.105 Sum_probs=95.2
Q ss_pred CCcceEEECCC-CCEEEEEeCCCeEEEEeCCCCe-------EEEEE------------EcCCC-CCeeEEEeecCCcceE
Q 024436 34 IGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRR-------WLHFA------------RTSPN-RNHISVILSGDKTGRL 92 (268)
Q Consensus 34 ~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~-------~~~~~------------~~~~~-~~~~~~~~~~~~~g~v 92 (268)
....+++++|+ +++++++..++.|..|+..... ..... ...++ ..+ +......+.|
T Consensus 114 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---l~~~~~dg~v 190 (416)
T 2pm9_A 114 SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHV---FASAGSSNFA 190 (416)
T ss_dssp SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTE---EEEESSSSCE
T ss_pred cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcE---EEEEcCCCCE
Confidence 46789999998 8989999899999998865321 11110 01122 111 2233567889
Q ss_pred EEEeCCCCeEEEeecC-------CCCcceEEEccCCCEEEEEecCCc---EEEEEEccCCCCCceeEEE-eCCCCCCceE
Q 024436 93 MKYDPATKQVTVLLGN-------LSFPNGVALSEDGNYILLAETTSC---RILRYWLKTSKAGTIEIVA-QLPGFPDNIK 161 (268)
Q Consensus 93 ~~~d~~~~~~~~~~~~-------~~~pnGia~spdg~~lyva~~~~~---~I~~~~~~~~~~g~~~~~~-~l~g~Pdgia 161 (268)
..+|..+++....... ....+.++|+|+++.++++....+ .|..|++..... ....+. .-.+....++
T Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~ 269 (416)
T 2pm9_A 191 SIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-PLQTLNQGHQKGILSLD 269 (416)
T ss_dssp EEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEE
T ss_pred EEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCccCceeEEE
Confidence 9999887765544432 345789999999855666666666 999999875311 111121 1123466889
Q ss_pred EcC-CCCEEEEEecCCCcceeeeEeeC-ccceeeeecc
Q 024436 162 RSP-RGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLP 197 (268)
Q Consensus 162 ~d~-dG~l~va~~~~~~~~~~~v~~~~-~~g~~l~~i~ 197 (268)
+.+ +|+++++....+. |..+. ..++.+..+.
T Consensus 270 ~s~~~~~~l~s~~~dg~-----v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 270 WCHQDEHLLLSSGRDNT-----VLLWNPESAEQLSQFP 302 (416)
T ss_dssp ECSSCSSCEEEEESSSE-----EEEECSSSCCEEEEEE
T ss_pred eCCCCCCeEEEEeCCCC-----EEEeeCCCCccceeec
Confidence 998 7876666655442 44443 4455555554
No 183
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.18 E-value=0.00014 Score=65.45 Aligned_cols=138 Identities=14% Similarity=0.104 Sum_probs=91.0
Q ss_pred CCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC------------CCCCeeEEEeecCCcceEEEEeCCCC
Q 024436 34 IGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTS------------PNRNHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 34 ~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~------------~~~~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
..-.+++|+| ++++++++..|+.|..|+..+.....+.... +++.+ +..+...|.|..+|.++.
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRM---VVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp CCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTE---EEEECSSSBEEEEESSSC
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCE---EEEEeCCCcEeeeccCcc
Confidence 4568999998 7889999999999999998876443332211 11122 224456788888888755
Q ss_pred eEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC---CCCCCceEEcCCCCEEEEEecCC
Q 024436 101 QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL---PGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 101 ~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l---~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
.+..+...-..-+.++|+|+++.++++.+..+.|..|++..... ...+... ......++++++|+++++....+
T Consensus 242 ~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~--~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~ 318 (435)
T 4e54_B 242 ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG--KASFLYSLPHRHPVNAACFSPDGARLLTTDQKS 318 (435)
T ss_dssp BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS--SSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS
T ss_pred eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccc--cceEEEeeeccccccceeECCCCCeeEEEcCCC
Confidence 44444444455689999999987888888889999999874321 1111111 12245678899998766655444
No 184
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=0.0015 Score=58.74 Aligned_cols=151 Identities=15% Similarity=0.137 Sum_probs=92.5
Q ss_pred CcceEEECCCCCEE-EEEeCCCeEEEEeCC---CCeEEEEEE-----------cCCCCCeeEEEeecCCcceEEEEeCCC
Q 024436 35 GPESLAFDALGEGP-YTGVSDGRIIKWHQD---QRRWLHFAR-----------TSPNRNHISVILSGDKTGRLMKYDPAT 99 (268)
Q Consensus 35 ~P~gia~~~dG~~l-~~~~~~g~I~~~~~~---g~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~v~~~d~~~ 99 (268)
...+++++|+|+.+ +++..++.|..|+.. ++....+.. ..+++.++. .....|.++.++..+
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~---~~~~~g~v~~~~~~~ 180 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVI---IADKFGDVYSIDINS 180 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEE---EEETTSEEEEEETTS
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEE---EEeCCCcEEEEecCC
Confidence 47899999999986 677788998888754 433333221 123333332 224467888888765
Q ss_pred CeEE-----EeecCCCCcceEEEccC---CCEEEEEecCCcEEEEEEccCCCCCceeEEEe-CCCCCCceEEcCCCCEEE
Q 024436 100 KQVT-----VLLGNLSFPNGVALSED---GNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWV 170 (268)
Q Consensus 100 ~~~~-----~~~~~~~~pnGia~spd---g~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~dG~l~v 170 (268)
++.. .+.......+.++|+|| +++| ++....+.|..|++..+.. ...+.. -.+....+++. +|++++
T Consensus 181 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l-~s~~~d~~i~vwd~~~~~~--~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 181 IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFI-ITSDRDEHIKISHYPQCFI--VDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEE-EEEETTSCEEEEEESCTTC--EEEECCCCSSCEEEEEEC-STTEEE
T ss_pred cccccccceeeecccCceEEEEEcCCCCCCcEE-EEEcCCCcEEEEECCCCce--eeeeecCCCCceEEEEEC-CCCEEE
Confidence 5432 23334455688999999 8655 4555678999999875321 222221 12356789999 998777
Q ss_pred EEecCCCcceeeeEeeC-ccceeeeecc
Q 024436 171 GIHSRRKGISKLVLSFP-WIGNVLIKLP 197 (268)
Q Consensus 171 a~~~~~~~~~~~v~~~~-~~g~~l~~i~ 197 (268)
+....+. |..+. ..++.+..+.
T Consensus 257 s~~~d~~-----v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 257 SAGGDDK-----IFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EEESSSE-----EEEEETTTCCEEEEEE
T ss_pred EEeCCCe-----EEEEECCCCcEeeeec
Confidence 6655442 33332 4566555554
No 185
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.18 E-value=0.00036 Score=61.04 Aligned_cols=136 Identities=16% Similarity=0.150 Sum_probs=88.7
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEEEc---------CC--CCCeeEEEeecCCcceEEEEeCCCCeE
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFART---------SP--NRNHISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~~~---------~~--~~~~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
...++++.|++..++++..|+.|..|+.. ++....+... .+ .+++ +..+..++.|..+|..+++.
T Consensus 156 ~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~---l~sgs~Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT---FVSGGCDKKAMVWDMRSGQC 232 (354)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE---EEEEETTSCEEEEETTTCCE
T ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE---EEEEeCCCeEEEEECCCCcE
Confidence 45688999999999999999999999875 3333333211 11 1122 22344678899999887765
Q ss_pred EEee-cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC--CCCCCceEEcCCCCEEEEEecCC
Q 024436 103 TVLL-GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL--PGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 103 ~~~~-~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l--~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
.... ..-...+.++|+|+++.| ++-+..+.|..|++.... ....+... ......+++.++|+++++....+
T Consensus 233 ~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~ 306 (354)
T 2pbi_B 233 VQAFETHESDVNSVRYYPSGDAF-ASGSDDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY 306 (354)
T ss_dssp EEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEecCCCCCeEEEEEeCCCCEE-EEEeCCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEECCC
Confidence 4443 344556899999999855 566678999999986421 11222111 11245788999999777666554
No 186
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.17 E-value=0.0015 Score=58.08 Aligned_cols=235 Identities=11% Similarity=0.132 Sum_probs=125.4
Q ss_pred CCEEEEecCCCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCC----C---eEEEEE--------EcCCCCCeeEEEeec
Q 024436 23 QGVVQYQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQ----R---RWLHFA--------RTSPNRNHISVILSG 86 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g----~---~~~~~~--------~~~~~~~~~~~~~~~ 86 (268)
+.+..+..+.-....+++++| +|++++++..||.|..|+... . ....+. ...++..++. ..
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~---s~ 129 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFA---VS 129 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEE---EE
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEE---EE
Confidence 355666455445789999999 999999999999999987532 1 011111 1123333222 22
Q ss_pred CCcceEEEEeCC---CCeEEEee-----------c--CCCCcceEE--EccCCCEEEEEecCCcEEEEEEccCCCCCcee
Q 024436 87 DKTGRLMKYDPA---TKQVTVLL-----------G--NLSFPNGVA--LSEDGNYILLAETTSCRILRYWLKTSKAGTIE 148 (268)
Q Consensus 87 ~~~g~v~~~d~~---~~~~~~~~-----------~--~~~~pnGia--~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~ 148 (268)
..++.|..+|.+ +++..... . .......++ +++|++ ++++.+..+.|..|++..... ..
T Consensus 130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~--~~ 206 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLER--LQ 206 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCCE--EE
T ss_pred eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCee--eE
Confidence 344555555442 23222111 0 223334455 557886 445666789999999975321 22
Q ss_pred EEEe--CCCCCCceEEcCCCCEEEEEecCCCcceeeeEeeC-ccceeeeecccc-ceeeeee--ccccCCCc--------
Q 024436 149 IVAQ--LPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPID-IVKIHSS--LVKLSGNG-------- 214 (268)
Q Consensus 149 ~~~~--l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~-~~g~~l~~i~~~-~~~~~~~--~~~~~~~~-------- 214 (268)
.+.. -.+....++++++|+++++....+. |..+. ..++.+..+..+ ...++++ .+..++..
T Consensus 207 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~ 281 (437)
T 3gre_A 207 IIENSPRHGAVSSICIDEECCVLILGTTRGI-----IDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS 281 (437)
T ss_dssp EEECCGGGCCEEEEEECTTSCEEEEEETTSC-----EEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEEST
T ss_pred EEccCCCCCceEEEEECCCCCEEEEEcCCCe-----EEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcC
Confidence 2222 1245678999999987776655543 33332 346666555422 1222222 01111220
Q ss_pred -EEEEEECC-CCCEEEEEEcCCCCc----------------------eeceEEEEEeCCEEEEeeCCCCeEEEEeCCC
Q 024436 215 -GMAMRISE-QGNVLEILEEIGRKM----------------------WRSISEVEEKDGNLWIGSVNMPYAGLYNYSS 268 (268)
Q Consensus 215 -~~~~~~~~-~G~~~~~~~~~~g~~----------------------~~~~s~~~~~~g~Lyv~s~~~~~v~~~~~~~ 268 (268)
+.+...+. .++.+..+...++.. ...++.+...+++++++...+..|.+.++++
T Consensus 282 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTC
T ss_pred CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCC
Confidence 33333443 255555555332111 1124445555778777777888888888753
No 187
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.16 E-value=0.00031 Score=61.72 Aligned_cols=219 Identities=10% Similarity=0.061 Sum_probs=119.7
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCC----C-eEEEEEE---------cCCC-CCeeEEEeecCCcceEEEEeCCC
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQ----R-RWLHFAR---------TSPN-RNHISVILSGDKTGRLMKYDPAT 99 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g----~-~~~~~~~---------~~~~-~~~~~~~~~~~~~g~v~~~d~~~ 99 (268)
...+++++|+|++++++..+|.|..|+.+. . ....+.. ..++ ..++ .....++.|..+|..+
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l---~s~~~dg~v~iwd~~~ 145 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVL---ASGGNNGEIFIWDMNK 145 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBE---EEECSSSCEEBCBTTT
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEE---EEEcCCCeEEEEECCC
Confidence 567899999999999999999999998764 2 2222111 1122 2222 2334567888888876
Q ss_pred Ce------EEE-e---ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC------CCCCCceEEc
Q 024436 100 KQ------VTV-L---LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL------PGFPDNIKRS 163 (268)
Q Consensus 100 ~~------~~~-~---~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l------~g~Pdgia~d 163 (268)
++ ... + .......+.++|+|++..++++....+.|..|++..+.. ...+... ......++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 146 CTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE--VIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE--EEEECCCCCSSCCCCCEEEEEEC
T ss_pred CccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc--ceEEeccccccccCCceEEEEEC
Confidence 54 111 1 223345679999999444667777889999999875321 1112111 2346789999
Q ss_pred CCC-CEEEEEecCCC--cceeeeEeeC-ccc-eeeeecc-ccceeeeee-ccc--------cCCCcEEEEEECC-CCCEE
Q 024436 164 PRG-GFWVGIHSRRK--GISKLVLSFP-WIG-NVLIKLP-IDIVKIHSS-LVK--------LSGNGGMAMRISE-QGNVL 227 (268)
Q Consensus 164 ~dG-~l~va~~~~~~--~~~~~v~~~~-~~g-~~l~~i~-~~~~~~~~~-~~~--------~~~~~~~~~~~~~-~G~~~ 227 (268)
++| +++++....+. . |..+. ..+ +.+..+. .....+.++ +.+ .... +.+...+. .++.+
T Consensus 224 ~~~~~~l~~~~~d~~~~~----i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-g~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPS----ILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-NTVLLWNPESAEQL 298 (416)
T ss_dssp SSCTTEEEEEECCSSSCC----CCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-SEEEEECSSSCCEE
T ss_pred CCCCCEEEEEECCCCCce----EEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC-CCEEEeeCCCCccc
Confidence 998 56655544420 1 22222 121 2222222 111111111 100 0111 33444454 36666
Q ss_pred EEEEcCCCCceeceEEEEE-eCC-EEEEeeCCCCeEEEEeCC
Q 024436 228 EILEEIGRKMWRSISEVEE-KDG-NLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 228 ~~~~~~~g~~~~~~s~~~~-~~g-~Lyv~s~~~~~v~~~~~~ 267 (268)
..+....+. ++.+.. .++ +++++...+..|.+.+++
T Consensus 299 ~~~~~~~~~----v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 299 SQFPARGNW----CFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp EEEECSSSC----CCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred eeecCCCCc----eEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 666654322 233333 344 677777778888888765
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.13 E-value=0.0014 Score=56.38 Aligned_cols=131 Identities=13% Similarity=0.081 Sum_probs=82.4
Q ss_pred CCCcceEEECCCCCEEEEEe---------CCCeEEEEeCCCCeEEEE-----EEcCCCCCeeEEEeecC--CcceEEEEe
Q 024436 33 AIGPESLAFDALGEGPYTGV---------SDGRIIKWHQDQRRWLHF-----ARTSPNRNHISVILSGD--KTGRLMKYD 96 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~---------~~g~I~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~--~~g~v~~~d 96 (268)
+..+.++++ ||+.++... .++.|+.++.++.....+ ...+|++.++.-..... ....|+.++
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~ 91 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVAD 91 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEEESCEEEEECTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEcccCCCeEECCCCCEEEEEEeccCCCcceEEEEE
Confidence 345567777 887664421 156788888765432222 12356665543222222 345799999
Q ss_pred CCCCeEEEeecCCCCcceEEEccCCCEEEEEecC--------------------------CcEEEEEEccCCCCCce-eE
Q 024436 97 PATKQVTVLLGNLSFPNGVALSEDGNYILLAETT--------------------------SCRILRYWLKTSKAGTI-EI 149 (268)
Q Consensus 97 ~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~--------------------------~~~I~~~~~~~~~~g~~-~~ 149 (268)
.++++.+.+...-. ...++|+|||+.|+++... ..+|++++++++. . ..
T Consensus 92 ~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~---~~~~ 167 (347)
T 2gop_A 92 LETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE---VIEE 167 (347)
T ss_dssp TTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE---EEEE
T ss_pred CCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe---EEee
Confidence 98888776654333 7899999999988887532 3679999987532 2 33
Q ss_pred EEeCCCCCCceEEcCCCCEEEEE
Q 024436 150 VAQLPGFPDNIKRSPRGGFWVGI 172 (268)
Q Consensus 150 ~~~l~g~Pdgia~d~dG~l~va~ 172 (268)
+.. + ....+++.+|| ++++.
T Consensus 168 l~~-~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 168 FEK-P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp EEE-E-TTCEEEEETTE-EEEEE
T ss_pred ecC-C-CcccccCCCCe-EEEEE
Confidence 333 3 56788999999 65544
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.13 E-value=0.00055 Score=59.70 Aligned_cols=131 Identities=11% Similarity=0.021 Sum_probs=80.2
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCeeEE---------------------E--------e----e
Q 024436 39 LAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNHISV---------------------I--------L----S 85 (268)
Q Consensus 39 ia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~~~~---------------------~--------~----~ 85 (268)
++++|||+.++....++.|+.++.++.....+...... +... + + .
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc--cCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 78899999887777778899999865432222211100 1000 0 0 0
Q ss_pred cCCcceEEEEeCCCCeEEEeecCCCCcceEEEcc-CCCEEEEE-ecCC----cEEEEEEccCCCCCceeEEEe-CCC-CC
Q 024436 86 GDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSE-DGNYILLA-ETTS----CRILRYWLKTSKAGTIEIVAQ-LPG-FP 157 (268)
Q Consensus 86 ~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~sp-dg~~lyva-~~~~----~~I~~~~~~~~~~g~~~~~~~-l~g-~P 157 (268)
......|+.+|.++++.+.+.........++|+| ||+.|+++ +... .+|+.++++++. ...+.. .++ .+
T Consensus 164 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---VRKIKEHAEGESC 240 (396)
T ss_dssp TCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC---CEESSCCCTTEEE
T ss_pred CCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc---eeEeeccCCCccc
Confidence 1345689999998888877766555677899999 78756554 4222 479999987532 122211 111 24
Q ss_pred CceEEcCCCC-EEEEEec
Q 024436 158 DNIKRSPRGG-FWVGIHS 174 (268)
Q Consensus 158 dgia~d~dG~-l~va~~~ 174 (268)
..+++++||+ |+.+...
T Consensus 241 ~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp EEEEECTTSSCEEEEEEE
T ss_pred cceEECCCCCEEEEEecC
Confidence 4578999997 5555443
No 190
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.09 E-value=0.00012 Score=67.17 Aligned_cols=146 Identities=12% Similarity=0.097 Sum_probs=85.3
Q ss_pred EEEEecCCCCCcceEEECCCCC--EEEEEeCCCeEEEEeCCCCeE-EEEEEc-----C------CCC-------------
Q 024436 25 VVQYQIEGAIGPESLAFDALGE--GPYTGVSDGRIIKWHQDQRRW-LHFART-----S------PNR------------- 77 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~dG~--~l~~~~~~g~I~~~~~~g~~~-~~~~~~-----~------~~~------------- 77 (268)
+++++-+ +..|.+|++.|||+ +|++ ...|+|++++++|... ..+... . ..+
T Consensus 6 v~~va~g-L~~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 6 IQEVVSG-LRQPVGALHSGDGSQRLFIL-EKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEE-ESSEEEEECCSSSSCCEEEE-ETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred EEEeccC-CCCceEEEECCCCCeEEEEE-eCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 5556544 77899999999995 5555 5679999998776420 111111 0 011
Q ss_pred CeeEEEeecCC----------cceEEEEeCCCC--------eEEEee-----cCCCCcceEEEccCCCEEEEEecC----
Q 024436 78 NHISVILSGDK----------TGRLMKYDPATK--------QVTVLL-----GNLSFPNGVALSEDGNYILLAETT---- 130 (268)
Q Consensus 78 ~~~~~~~~~~~----------~g~v~~~d~~~~--------~~~~~~-----~~~~~pnGia~spdg~~lyva~~~---- 130 (268)
.+++...+... ..+|.|+....+ +.+++. ...++...|+|+|||+ |||+-..
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd~~~~ 162 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGDGMIT 162 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECCTTCC
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCCCCCC
Confidence 13333332211 136766654311 122322 2335567899999995 9998432
Q ss_pred -------------CcEEEEEEccCC------CC-------C----ceeEEEeCCCCCCceEEcCC-----CCE--EEEEe
Q 024436 131 -------------SCRILRYWLKTS------KA-------G----TIEIVAQLPGFPDNIKRSPR-----GGF--WVGIH 173 (268)
Q Consensus 131 -------------~~~I~~~~~~~~------~~-------g----~~~~~~~l~g~Pdgia~d~d-----G~l--~va~~ 173 (268)
.++|+|+++++. .+ + ..++++.--..|.|+++|++ |+| |.++.
T Consensus 163 ~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 163 LDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp HHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred CCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEeccc
Confidence 368999999873 10 1 23556542236999999997 655 44554
No 191
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.09 E-value=0.00061 Score=60.82 Aligned_cols=104 Identities=16% Similarity=0.234 Sum_probs=71.9
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
....+++++|+|++++++..|+.|..|+..+.. ...+. ...+++.++ ..+..++.|..+|..+++..
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l---~s~s~D~~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHI---VSASRDKTIKMWEVQTGYCV 227 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEE---EEEETTSEEEEEETTTCCEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEE---EEEeCCCeEEEEECCCCcEE
Confidence 356889999999999999999999999876532 11110 112333332 23446678888888777643
Q ss_pred -EeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC
Q 024436 104 -VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT 141 (268)
Q Consensus 104 -~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~ 141 (268)
.+...-...+.++++|||+ ++++.+..+.|..|++..
T Consensus 228 ~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 228 KTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred EEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCC
Confidence 3444455668899999998 445666788999999874
No 192
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.08 E-value=0.00089 Score=57.91 Aligned_cols=144 Identities=9% Similarity=0.026 Sum_probs=89.0
Q ss_pred EEEEecCCCCCcceEEECC--CCCEEEEEeCCCeEEEEeCCCCeEEEEEE-----------cCCCCCeeEEEeecCCcce
Q 024436 25 VVQYQIEGAIGPESLAFDA--LGEGPYTGVSDGRIIKWHQDQRRWLHFAR-----------TSPNRNHISVILSGDKTGR 91 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~--dG~~l~~~~~~g~I~~~~~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~ 91 (268)
++.+..+.-....+++++| +|++++++..|+.|..|+........... ..+++.++ ..+..++.
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~l---asg~~dg~ 193 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLL---ALYSPDGI 193 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEE---EEECTTSC
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEE---EEEcCCCE
Confidence 4555555434578999999 99999999999999999875433222111 11222222 23456788
Q ss_pred EEEEeCCCCeEE--Eeec-CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCC-CceeEEEeCCCCCC---ceEEcC
Q 024436 92 LMKYDPATKQVT--VLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKA-GTIEIVAQLPGFPD---NIKRSP 164 (268)
Q Consensus 92 v~~~d~~~~~~~--~~~~-~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~-g~~~~~~~l~g~Pd---gia~d~ 164 (268)
|..+|..+++.. .+.. +....+.++|+|||++|..+. . +.|..|++..... .....+. ....+- .+++++
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D-QTVVCFDLRKDVGTLAYPTYT-IPEFKTGTVTYDIDD 270 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S-SBEEEEETTSSTTCBSSCCCB-C-----CCEEEEECT
T ss_pred EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C-CeEEEEEcCCCCcceeecccc-cccccccceEEEECC
Confidence 888888876643 3333 345668999999998776665 3 4999999975321 1111110 011232 499999
Q ss_pred CCCEEEEEec
Q 024436 165 RGGFWVGIHS 174 (268)
Q Consensus 165 dG~l~va~~~ 174 (268)
+|+++++...
T Consensus 271 ~g~~l~~~s~ 280 (343)
T 3lrv_A 271 SGKNMIAYSN 280 (343)
T ss_dssp TSSEEEEEET
T ss_pred CCCEEEEecC
Confidence 9997777555
No 193
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.07 E-value=0.0018 Score=55.98 Aligned_cols=137 Identities=11% Similarity=0.024 Sum_probs=84.7
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
..-..++++|++.+++++..|+.|..|+.. ++....+.. ..++..++. .....+.|..+|..+....
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~---s~~~d~~i~~wd~~~~~~~ 153 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQIL---SAGAEREIKLWNILGECKF 153 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEE---EEETTSCEEEEESSSCEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEE---EEcCCCEEEEEeccCCcee
Confidence 356789999999999999999999999875 333333221 123333332 2334567777777633332
Q ss_pred Eee---cCCCCcceEEEccCCC---------EEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEE
Q 024436 104 VLL---GNLSFPNGVALSEDGN---------YILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVG 171 (268)
Q Consensus 104 ~~~---~~~~~pnGia~spdg~---------~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va 171 (268)
... ......+.++|+|+++ .++++-...+.|..|+... .....+..-.+....++++++|+++++
T Consensus 154 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~h~~~v~~~~~s~~g~~l~s 230 (343)
T 2xzm_R 154 SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF---QIRYTFKAHESNVNHLSISPNGKYIAT 230 (343)
T ss_dssp ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT---EEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC---ceeEEEcCccccceEEEECCCCCEEEE
Confidence 222 2233457899999872 2556667789999999542 111222222234567899999987776
Q ss_pred EecCC
Q 024436 172 IHSRR 176 (268)
Q Consensus 172 ~~~~~ 176 (268)
....+
T Consensus 231 gs~dg 235 (343)
T 2xzm_R 231 GGKDK 235 (343)
T ss_dssp EETTC
T ss_pred EcCCC
Confidence 65554
No 194
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.07 E-value=0.00025 Score=62.17 Aligned_cols=138 Identities=14% Similarity=0.208 Sum_probs=85.4
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeEEE
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 104 (268)
...+++++|+|++++++..++.|..|+..... ...+.. ..+..... +.....++.|..+|..+++...
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~--~~s~~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI--FLSCGEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC--EEEEETTSCEEECCTTSSSCBC
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce--eeeeccCCceEEEECCCCceee
Confidence 46789999999999999999999999876442 222211 11222111 1123356778888887665433
Q ss_pred ee---cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC-EEEEEecCC
Q 024436 105 LL---GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG-FWVGIHSRR 176 (268)
Q Consensus 105 ~~---~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~-l~va~~~~~ 176 (268)
.. .....++.++|+|++..++++....+.|..|++..+.. ...+..-.+....+++.++|. ++++....+
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~ 292 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS--AQTSAVHSQNITGLAYSYHSSPFLASISEDC 292 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG--CEEECCCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE--eEEEeccceeEEEEEEcCCCCCEEEEEeCCC
Confidence 22 22344678999999766777777788999999875321 222221122346789999884 555444433
No 195
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.07 E-value=0.00032 Score=66.25 Aligned_cols=135 Identities=11% Similarity=0.005 Sum_probs=81.8
Q ss_pred cceEEECCCCCEEEEEeCC----------CeEEEEeCCC------CeEEEEE----------EcCCCCCeeEEEeecC--
Q 024436 36 PESLAFDALGEGPYTGVSD----------GRIIKWHQDQ------RRWLHFA----------RTSPNRNHISVILSGD-- 87 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~~----------g~I~~~~~~g------~~~~~~~----------~~~~~~~~~~~~~~~~-- 87 (268)
..+++++|||+.+++...+ .+|++++.++ .....+. ..+|++.++.-.....
T Consensus 132 ~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~ 211 (662)
T 3azo_A 132 WADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPR 211 (662)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTC
T ss_pred ccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCC
Confidence 5678999999988765544 5899998876 3222211 1245555443222222
Q ss_pred ---CcceEEEEeCC-CC---eEEEeecC-CCCcceEEEccCCCEEEEEecCCc--EEEEEEccCCCCCceeEEEeCC---
Q 024436 88 ---KTGRLMKYDPA-TK---QVTVLLGN-LSFPNGVALSEDGNYILLAETTSC--RILRYWLKTSKAGTIEIVAQLP--- 154 (268)
Q Consensus 88 ---~~g~v~~~d~~-~~---~~~~~~~~-~~~pnGia~spdg~~lyva~~~~~--~I~~~~~~~~~~g~~~~~~~l~--- 154 (268)
....|+.+|.+ ++ +.+.+..+ ......++|+|||+ +|++....+ +|++++++++. ...+....
T Consensus 212 ~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~ 287 (662)
T 3azo_A 212 MPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA---ATQLCRREEEF 287 (662)
T ss_dssp CTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC---EEESSCCSSBS
T ss_pred CCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc---eeecccccccc
Confidence 23579999987 46 56666544 35677899999999 555544445 88888875432 22221110
Q ss_pred C----C--CCceEEcCCCCEEEEEec
Q 024436 155 G----F--PDNIKRSPRGGFWVGIHS 174 (268)
Q Consensus 155 g----~--Pdgia~d~dG~l~va~~~ 174 (268)
. . ...+++.++|++++....
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred cCccccccCceEeEeCCCEEEEEEEc
Confidence 0 1 346788888887776654
No 196
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.06 E-value=0.0018 Score=61.69 Aligned_cols=154 Identities=16% Similarity=0.170 Sum_probs=94.7
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCC-eEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQR-RWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~-~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
....+++++|+|++++++..|+.|..|+.... ....+.. .++++.++ .+...++.|..+|..+....
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l---~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI---VSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCE---EEEETTSCEEEECTTSCEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEE---EEEeCCCEEEEEECCCCcce
Confidence 45678999999999999999999999987543 2222211 12333322 23345677888887643333
Q ss_pred Eeec----CCCCcceEEEccCCC-EEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCCCc
Q 024436 104 VLLG----NLSFPNGVALSEDGN-YILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKG 178 (268)
Q Consensus 104 ~~~~----~~~~pnGia~spdg~-~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~ 178 (268)
.+.. +...-+.++|+|++. .++++.+..+.|..|++..... ...+..-.+....++++++|+++++....+.
T Consensus 508 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~- 584 (694)
T 3dm0_A 508 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RSTLAGHTGYVSTVAVSPDGSLCASGGKDGV- 584 (694)
T ss_dssp EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSB-
T ss_pred eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe-
Confidence 3322 223357899999873 3566777889999999875321 1222112234668999999998777665543
Q ss_pred ceeeeEee-Cccceeeeecc
Q 024436 179 ISKLVLSF-PWIGNVLIKLP 197 (268)
Q Consensus 179 ~~~~v~~~-~~~g~~l~~i~ 197 (268)
|..+ ...++.+..+.
T Consensus 585 ----i~iwd~~~~~~~~~~~ 600 (694)
T 3dm0_A 585 ----VLLWDLAEGKKLYSLE 600 (694)
T ss_dssp ----CEEEETTTTEEEECCB
T ss_pred ----EEEEECCCCceEEEec
Confidence 3333 24555555443
No 197
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.05 E-value=0.0022 Score=60.95 Aligned_cols=90 Identities=10% Similarity=-0.014 Sum_probs=58.2
Q ss_pred CcceEEECCCCCEEEEEeCC---------CeEEEEeCCCCeEEEEE------------EcCCCCCeeEEEeecCCcceEE
Q 024436 35 GPESLAFDALGEGPYTGVSD---------GRIIKWHQDQRRWLHFA------------RTSPNRNHISVILSGDKTGRLM 93 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~---------g~I~~~~~~g~~~~~~~------------~~~~~~~~~~~~~~~~~~g~v~ 93 (268)
...+++++|||+.+++...+ +.|+.++.++.....+. ..+|++.++. +.. .+.|+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la-~~~---~~~i~ 137 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLI-FIF---ENNIY 137 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEE-EEE---TTEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEE-EEE---CCeEE
Confidence 37899999999988776653 77888887654222221 1133443332 212 26899
Q ss_pred EEeCCCCeEEEeecCCC-------------------CcceEEEccCCCEEEEEe
Q 024436 94 KYDPATKQVTVLLGNLS-------------------FPNGVALSEDGNYILLAE 128 (268)
Q Consensus 94 ~~d~~~~~~~~~~~~~~-------------------~pnGia~spdg~~lyva~ 128 (268)
.+|.++++...+..... ...+++|||||++|+++.
T Consensus 138 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 138 YCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp EESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred EEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 99998777666543311 236899999999887765
No 198
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.05 E-value=0.00026 Score=68.84 Aligned_cols=130 Identities=14% Similarity=0.243 Sum_probs=77.6
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcC-C---CCCeeEEEeecCC-------cceEEEEeCCCCeEE
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTS-P---NRNHISVILSGDK-------TGRLMKYDPATKQVT 103 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~-~---~~~~~~~~~~~~~-------~g~v~~~d~~~~~~~ 103 (268)
...+++.+++|++++. .. +.+.+++++...+..+.... + ...++..+..+.. .+.|+++|+++++.
T Consensus 453 ~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~- 529 (795)
T 4a2l_A 453 NVYAILPDGEGNLWLG-TL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQEGLDI- 529 (795)
T ss_dssp CEEEEEECSSSCEEEE-ES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEESSCEEEEEEETTEE-
T ss_pred eeEEEEECCCCCEEEE-ec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeCCceEEEeCCCCeE-
Confidence 4678899999995554 44 56889998765444432110 0 0112222222110 14578888876665
Q ss_pred Eee---c--CC--CCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCC----ceEEcCCCCEEEEE
Q 024436 104 VLL---G--NL--SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPD----NIKRSPRGGFWVGI 172 (268)
Q Consensus 104 ~~~---~--~~--~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pd----gia~d~dG~l~va~ 172 (268)
... . ++ ...+.|..+++|+ ||++... .|++|+.++. ....+....|.|+ +|+.|++|+||++.
T Consensus 530 ~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~~--Gl~~~d~~~~---~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 530 QKASILPVSNVTKLFTNCIYEASNGI-IWVGTRE--GFYCFNEKDK---QIKRYNTTNGLPNNVVYGILEDSFGRLWLST 603 (795)
T ss_dssp EECCCSCSCGGGGSCEEEEEECTTSC-EEEEESS--CEEEEETTTT---EEEEECGGGTCSCSCEEEEEECTTSCEEEEE
T ss_pred EEecCCCCCCCCCCeeEEEEECCCCC-EEEEeCC--CceeECCCCC---cEEEeCCCCCCchhheEEEEECCCCCEEEEc
Confidence 322 1 11 2346788899996 8887543 7899997642 2333332234554 48889999999998
Q ss_pred e
Q 024436 173 H 173 (268)
Q Consensus 173 ~ 173 (268)
.
T Consensus 604 ~ 604 (795)
T 4a2l_A 604 N 604 (795)
T ss_dssp T
T ss_pred C
Confidence 4
No 199
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.05 E-value=0.0011 Score=66.45 Aligned_cols=96 Identities=11% Similarity=0.012 Sum_probs=68.7
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE----------EcCCCCCeeEEEeec-------CCcceEEEEe
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFA----------RTSPNRNHISVILSG-------DKTGRLMKYD 96 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~~-------~~~g~v~~~d 96 (268)
..+..++++|||+.+++...++.|+.++.++....... ..+|++.++...... ...+.|+.+|
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence 46789999999999988888999999998654333222 113444544322221 2346899999
Q ss_pred CCCCeEEEeecCCCCcceEEEccCCCEEEEEec
Q 024436 97 PATKQVTVLLGNLSFPNGVALSEDGNYILLAET 129 (268)
Q Consensus 97 ~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~ 129 (268)
.++++...+.........++|+|||++||++..
T Consensus 459 ~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 459 MEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 998887777666666788999999999988754
No 200
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.04 E-value=0.0016 Score=58.07 Aligned_cols=145 Identities=10% Similarity=0.066 Sum_probs=91.1
Q ss_pred CCCCcceEEECCCCCEEEEEeCC---------------CeEEEEeCCCC--eEE-EEE----------------Ec--CC
Q 024436 32 GAIGPESLAFDALGEGPYTGVSD---------------GRIIKWHQDQR--RWL-HFA----------------RT--SP 75 (268)
Q Consensus 32 ~~~~P~gia~~~dG~~l~~~~~~---------------g~I~~~~~~g~--~~~-~~~----------------~~--~~ 75 (268)
++....++.+|+.|++++.+.+. -+|+.+|.... .+. .+. .. .+
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 46788999999999988887641 25677776543 222 221 11 11
Q ss_pred C--CCeeEEEeecCCcceEEEEeCCCCeEEEeec--------------C-----CCCcceEEEccC----CCEEEEEecC
Q 024436 76 N--RNHISVILSGDKTGRLMKYDPATKQVTVLLG--------------N-----LSFPNGVALSED----GNYILLAETT 130 (268)
Q Consensus 76 ~--~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--------------~-----~~~pnGia~spd----g~~lyva~~~ 130 (268)
. ..-...++++.....|.++|..+++..++.. + ....+||++||+ +++||+.-..
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls 244 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS 244 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC
Confidence 1 1112334455566788889888776554431 1 124568999999 8999999999
Q ss_pred CcEEEEEEcc---CCCC-CceeEEEeCCCCCC--ceEEc-CCCCEEEEEecCC
Q 024436 131 SCRILRYWLK---TSKA-GTIEIVAQLPGFPD--NIKRS-PRGGFWVGIHSRR 176 (268)
Q Consensus 131 ~~~I~~~~~~---~~~~-g~~~~~~~l~g~Pd--gia~d-~dG~l~va~~~~~ 176 (268)
+.++++...+ ...+ ...+.+.+-+...+ ++++| .+|+||.+....+
T Consensus 245 s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~ 297 (381)
T 3q6k_A 245 AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTK 297 (381)
T ss_dssp CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSS
T ss_pred CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCC
Confidence 8999999854 2222 22333333211245 56786 7899999998776
No 201
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.04 E-value=0.00027 Score=62.52 Aligned_cols=146 Identities=12% Similarity=0.038 Sum_probs=93.3
Q ss_pred CEEEEe-cCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEEc-----------CCCCCeeEEEeecCCcc
Q 024436 24 GVVQYQ-IEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFART-----------SPNRNHISVILSGDKTG 90 (268)
Q Consensus 24 ~~~~i~-~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~~~-----------~~~~~~~~~~~~~~~~g 90 (268)
.+..+. .+......+++++|+|++++++..++.|..|+..... ...+... .+++.++..-+.....+
T Consensus 166 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 166 AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp EEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred ccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence 444442 2223467899999999999999999999999976442 2222111 11112222111114678
Q ss_pred eEEEEeCCCCeE---EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC--CCCCCceEEcCC
Q 024436 91 RLMKYDPATKQV---TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL--PGFPDNIKRSPR 165 (268)
Q Consensus 91 ~v~~~d~~~~~~---~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l--~g~Pdgia~d~d 165 (268)
.|..+|..+++. ............++|+||++.||++....+.|..|++..+.. ....+... .+...++++.++
T Consensus 246 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~-~~~~l~~~~~~~~v~~~~~sp~ 324 (402)
T 2aq5_A 246 QVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP-FLHYLSMFSSKESQRGMGYMPK 324 (402)
T ss_dssp EEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT-CEEEEEEECCSSCCSEEEECCG
T ss_pred eEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc-ceEeecccccCCcccceEEecc
Confidence 899998875432 122234455788999999999999988889999999985331 02233222 245788999998
Q ss_pred CCEEE
Q 024436 166 GGFWV 170 (268)
Q Consensus 166 G~l~v 170 (268)
|.+.+
T Consensus 325 ~~~~~ 329 (402)
T 2aq5_A 325 RGLEV 329 (402)
T ss_dssp GGSCG
T ss_pred cccce
Confidence 87654
No 202
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.03 E-value=0.0013 Score=61.84 Aligned_cols=64 Identities=20% Similarity=0.288 Sum_probs=43.7
Q ss_pred CcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 111 FPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 111 ~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
..+.++|+|||++| ++.+..+.|..|+++++....... ..-++....+++.|||+++++....+
T Consensus 450 ~v~~va~spdg~~l-asgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~ 513 (611)
T 1nr0_A 450 NSSCVALSNDKQFV-AVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSR 513 (611)
T ss_dssp CEEEEEECTTSCEE-EEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTS
T ss_pred CceEEEEeCCCCEE-EEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCC
Confidence 45789999999855 555677899999987532111111 12234567899999999877766555
No 203
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.02 E-value=0.00074 Score=67.70 Aligned_cols=128 Identities=14% Similarity=0.113 Sum_probs=83.8
Q ss_pred CcceEEEC-CCCCEEEEEeCCCeEEEEeCCCCeEEEEE----------EcCCCCCeeEEEeecCCcceEE-EEeCCCCeE
Q 024436 35 GPESLAFD-ALGEGPYTGVSDGRIIKWHQDQRRWLHFA----------RTSPNRNHISVILSGDKTGRLM-KYDPATKQV 102 (268)
Q Consensus 35 ~P~gia~~-~dG~~l~~~~~~g~I~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~g~v~-~~d~~~~~~ 102 (268)
.+.+++++ |||+.+++.. ++.|+.++.++.....+. ..+ ++..+. +.. . .+.++ .++.++++.
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~-~~s-~-~~~l~~~~d~~~~~~ 371 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFI-HGT-R-EGDFLGIYDYRTGKA 371 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEE-EEE-T-TEEEEEEEETTTCCE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEE-EEE-C-CCceEEEEECCCCCc
Confidence 47899999 9999776655 788888876644322211 011 111111 112 2 56889 899887777
Q ss_pred EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eCCCCCCceEEcCCCCEEEE
Q 024436 103 TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPGFPDNIKRSPRGGFWVG 171 (268)
Q Consensus 103 ~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l~g~Pdgia~d~dG~l~va 171 (268)
+.+.........++|+|||++|+++. ..+.|+.|+++++. ...+. ...+....++++|||+.++.
T Consensus 372 ~~l~~~~~~~~~~~~SpDG~~la~~~-~~~~v~~~d~~tg~---~~~~~~~~~~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 372 EKFEENLGNVFAMGVDRNGKFAVVAN-DRFEIMTVDLETGK---PTVIERSREAMITDFTISDNSRFIAY 437 (1045)
T ss_dssp EECCCCCCSEEEEEECTTSSEEEEEE-TTSEEEEEETTTCC---EEEEEECSSSCCCCEEECTTSCEEEE
T ss_pred eEecCCccceeeeEECCCCCEEEEEC-CCCeEEEEECCCCc---eEEeccCCCCCccceEECCCCCeEEE
Confidence 76664446678999999999887665 45799999997532 33333 22334578999999985443
No 204
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.02 E-value=4.4e-05 Score=69.94 Aligned_cols=71 Identities=23% Similarity=0.274 Sum_probs=54.6
Q ss_pred CeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC---------CCCCceEEcC----CC
Q 024436 100 KQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP---------GFPDNIKRSP----RG 166 (268)
Q Consensus 100 ~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~---------g~Pdgia~d~----dG 166 (268)
-+++++++++..|.+|+|.|||+ |||++...++|++++.+++ ..+.+..++ +.+-||+++| +|
T Consensus 17 f~~~~~a~~l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g---~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g 92 (454)
T 1cru_A 17 FDKKVILSNLNKPHALLWGPDNQ-IWLTERATGKILRVNPESG---SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNP 92 (454)
T ss_dssp SCEEEEECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTC---CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSC
T ss_pred eEEEEEECCCCCceEEEEcCCCc-EEEEEcCCCEEEEEECCCC---cEeEEecCCccccccCCCCceeEEEECCCcCcCC
Confidence 46778888999999999999996 9999988789999986532 234444332 2345999999 67
Q ss_pred CEEEEEec
Q 024436 167 GFWVGIHS 174 (268)
Q Consensus 167 ~l~va~~~ 174 (268)
.||++...
T Consensus 93 ~lYv~~s~ 100 (454)
T 1cru_A 93 YIYISGTF 100 (454)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 89998864
No 205
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.01 E-value=0.00041 Score=59.20 Aligned_cols=134 Identities=12% Similarity=0.038 Sum_probs=86.6
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe----EEEEEEc---------CCCCC-eeEEEeecCCcceEEEEeC-
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR----WLHFART---------SPNRN-HISVILSGDKTGRLMKYDP- 97 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~----~~~~~~~---------~~~~~-~~~~~~~~~~~g~v~~~d~- 97 (268)
-....+++++|+|++++++..++.|..|+.+... ....... .++.. ++ +.+...+.|..+|.
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l---~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQI---YVGTVQGEILKVDLI 87 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEE---EEEETTSCEEEECSS
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEE---EEEcCCCeEEEEEec
Confidence 3468899999999999999999999888754322 2221111 12222 22 23345688999998
Q ss_pred CCCeEEEeec--CCCCcceEEEccCCCEEEEEecCCcEEEEEEccC---------CCCCceeEEEeCCCCCCceEEcCCC
Q 024436 98 ATKQVTVLLG--NLSFPNGVALSEDGNYILLAETTSCRILRYWLKT---------SKAGTIEIVAQLPGFPDNIKRSPRG 166 (268)
Q Consensus 98 ~~~~~~~~~~--~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~---------~~~g~~~~~~~l~g~Pdgia~d~dG 166 (268)
.+++...+.. .-...+.++|+| ++.|+ +.+..+.|..|++.. ... ...+ ..++.+..+++++++
T Consensus 88 ~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~-~~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 88 GSPSFQALTNNEANLGICRICKYG-DDKLI-AASWDGLIEVIDPRNYGDGVIAVKNLN--SNNT-KVKNKIFTMDTNSSR 162 (342)
T ss_dssp SSSSEEECBSCCCCSCEEEEEEET-TTEEE-EEETTSEEEEECHHHHTTBCEEEEESC--SSSS-SSCCCEEEEEECSSE
T ss_pred cCCceEeccccCCCCceEEEEeCC-CCEEE-EEcCCCeEEEEcccccccccccccCCe--eeEE-eeCCceEEEEecCCc
Confidence 8777766665 556678999999 77554 556778999999863 110 0001 123456778888877
Q ss_pred CEEEEEecC
Q 024436 167 GFWVGIHSR 175 (268)
Q Consensus 167 ~l~va~~~~ 175 (268)
++++...+
T Consensus 163 -l~~~~~d~ 170 (342)
T 1yfq_A 163 -LIVGMNNS 170 (342)
T ss_dssp -EEEEESTT
T ss_pred -EEEEeCCC
Confidence 66665544
No 206
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.01 E-value=0.002 Score=55.18 Aligned_cols=150 Identities=12% Similarity=0.075 Sum_probs=91.8
Q ss_pred CEEEEecCCCCCcceEEECCC----CCEEEEEeCCCeEEEEeCC-CCeEEEEEEc--------------CCCCCe-eEEE
Q 024436 24 GVVQYQIEGAIGPESLAFDAL----GEGPYTGVSDGRIIKWHQD-QRRWLHFART--------------SPNRNH-ISVI 83 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~d----G~~l~~~~~~g~I~~~~~~-g~~~~~~~~~--------------~~~~~~-~~~~ 83 (268)
.++.+..+......+++++|+ ...+++...++.|..|+.. ++.+..+... .++... ...+
T Consensus 9 ~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 9 CVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp EEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEE
T ss_pred EEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEE
Confidence 445666565567899999984 4456666667788888765 3322222211 011000 0112
Q ss_pred eecCCcceEEEEeCCCCeEEE-eecCCCCcceEEEcc-CCCEEEEEecCCcEEEEEEccCCCCCceeEEEe---CCCCCC
Q 024436 84 LSGDKTGRLMKYDPATKQVTV-LLGNLSFPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ---LPGFPD 158 (268)
Q Consensus 84 ~~~~~~g~v~~~d~~~~~~~~-~~~~~~~pnGia~sp-dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~---l~g~Pd 158 (268)
..+..+|.|..+|..+++... +...-...+.++|+| +++.| ++-...+.|..|++..+. ....+.. ..+...
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~v~ 165 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLL-LSVSKDHALRLWNIQTDT--LVAIFGGVEGHRDEVL 165 (366)
T ss_dssp EEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEE-EEEETTSCEEEEETTTTE--EEEEECSTTSCSSCEE
T ss_pred EEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEE-EEEeCCCeEEEEEeecCe--EEEEecccccccCcee
Confidence 334567889999988776544 334555678999999 88755 555677899999987432 1222211 123567
Q ss_pred ceEEcCCCCEEEEEecCC
Q 024436 159 NIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 159 gia~d~dG~l~va~~~~~ 176 (268)
.++++++|+++++....+
T Consensus 166 ~~~~~~~~~~l~~~~~dg 183 (366)
T 3k26_A 166 SADYDLLGEKIMSCGMDH 183 (366)
T ss_dssp EEEECTTSSEEEEEETTS
T ss_pred EEEECCCCCEEEEecCCC
Confidence 899999998777665554
No 207
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.00 E-value=0.00063 Score=65.49 Aligned_cols=162 Identities=13% Similarity=0.105 Sum_probs=99.3
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEEE---------cCCCCCeeEEEeecCCcceEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFAR---------TSPNRNHISVILSGDKTGRLM 93 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~ 93 (268)
.+..+... -....+++++|+|+.++++..+|.|..|+.+ ++....+.. ..++++++. ....+|.|.
T Consensus 47 ~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~---~~~~dg~i~ 122 (814)
T 3mkq_A 47 EVRSIQVT-ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVL---SGSDDLTVK 122 (814)
T ss_dssp EEEEEECC-SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEE---EEETTSEEE
T ss_pred eEEEEecC-CCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEE---EEcCCCEEE
Confidence 44555533 3467899999999999999999999999864 443222221 123333332 234567777
Q ss_pred EEeCCCC-eEE-EeecCCCCcceEEEcc-CCCEEEEEecCCcEEEEEEccCCCCCceeEEEe-CCCCCCceEEcC--CCC
Q 024436 94 KYDPATK-QVT-VLLGNLSFPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSP--RGG 167 (268)
Q Consensus 94 ~~d~~~~-~~~-~~~~~~~~pnGia~sp-dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~--dG~ 167 (268)
.+|.+++ ... .+...-.....++|+| |++ ++++.+..+.|..|++..+.. ...+.. .......+++.+ +|+
T Consensus 123 vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~ 199 (814)
T 3mkq_A 123 LWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDKP 199 (814)
T ss_dssp EEEGGGTSEEEEEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCSSC--SEEEECCCTTCCCEEEECCSTTCC
T ss_pred EEECCCCceEEEEEcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcc--eeEEecCCCCCEEEEEEEECCCCC
Confidence 7777654 333 3344445578999999 775 555666789999999875321 122222 223466788888 888
Q ss_pred EEEEEecCCCcceeeeEeeC-ccceeeeecc
Q 024436 168 FWVGIHSRRKGISKLVLSFP-WIGNVLIKLP 197 (268)
Q Consensus 168 l~va~~~~~~~~~~~v~~~~-~~g~~l~~i~ 197 (268)
++++....+. |..+. ..++.+..+.
T Consensus 200 ~l~~~~~dg~-----i~~~d~~~~~~~~~~~ 225 (814)
T 3mkq_A 200 YMITASDDLT-----IKIWDYQTKSCVATLE 225 (814)
T ss_dssp EEEEECTTSE-----EEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCE-----EEEEECCCCcEEEEEc
Confidence 7776665542 33333 4455554443
No 208
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.99 E-value=0.00074 Score=60.52 Aligned_cols=148 Identities=10% Similarity=0.103 Sum_probs=91.4
Q ss_pred EEEEecCCCCCcceEEECCC-CCEEEEEeCCCeEEEEeCCC-----------CeEEEEEEc---------CCCCCeeEEE
Q 024436 25 VVQYQIEGAIGPESLAFDAL-GEGPYTGVSDGRIIKWHQDQ-----------RRWLHFART---------SPNRNHISVI 83 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g-----------~~~~~~~~~---------~~~~~~~~~~ 83 (268)
...+...+ .+..+++.|+ +++++++..+|.|..|+... .....+... .+.... .+
T Consensus 122 ~~~~~h~~--~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~--~l 197 (430)
T 2xyi_A 122 EIKINHEG--EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNG--YL 197 (430)
T ss_dssp EEEEEESS--CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTT--EE
T ss_pred EEEEcCCC--cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCC--eE
Confidence 33444443 7999999998 77888888899998887542 211222111 112221 12
Q ss_pred eecCCcceEEEEeCCCCe--------EEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCC-CCceeEEEeCC
Q 024436 84 LSGDKTGRLMKYDPATKQ--------VTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSK-AGTIEIVAQLP 154 (268)
Q Consensus 84 ~~~~~~g~v~~~d~~~~~--------~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~-~g~~~~~~~l~ 154 (268)
+.+...|.|..++..++. ...+.......+.++|+|++..++++....+.|..|++.... ......+..-.
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 344567788888876521 122334445578999999655677888889999999997532 11122222223
Q ss_pred CCCCceEEcCCCC-EEEEEecCC
Q 024436 155 GFPDNIKRSPRGG-FWVGIHSRR 176 (268)
Q Consensus 155 g~Pdgia~d~dG~-l~va~~~~~ 176 (268)
..+..+++.++|. ++++....+
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg 300 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADK 300 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTS
T ss_pred CCeEEEEeCCCCCCEEEEEeCCC
Confidence 4578899999986 666655544
No 209
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.99 E-value=0.0012 Score=57.53 Aligned_cols=136 Identities=13% Similarity=0.064 Sum_probs=86.2
Q ss_pred CCcceEEEC----CCCCE-EEEEeCCCeEEEEeCCC-------CeEE-----EEEE----------------cCCCCCee
Q 024436 34 IGPESLAFD----ALGEG-PYTGVSDGRIIKWHQDQ-------RRWL-----HFAR----------------TSPNRNHI 80 (268)
Q Consensus 34 ~~P~gia~~----~dG~~-l~~~~~~g~I~~~~~~g-------~~~~-----~~~~----------------~~~~~~~~ 80 (268)
....++++. |+++. ++++..++.|..|+... +... .+.. ..++.
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 198 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--- 198 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS---
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc---
Confidence 467899999 99999 89998999998887543 2111 2211 01222
Q ss_pred EEEeecCCcceEEEEeCCCCeEEEeecC-------CCCcceEEEccCCCEEEEEecCC---cEEEEEEccCCCCCceeEE
Q 024436 81 SVILSGDKTGRLMKYDPATKQVTVLLGN-------LSFPNGVALSEDGNYILLAETTS---CRILRYWLKTSKAGTIEIV 150 (268)
Q Consensus 81 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~-------~~~pnGia~spdg~~lyva~~~~---~~I~~~~~~~~~~g~~~~~ 150 (268)
.+......+.|..+|..+++....... ....+.++|+|++++|+++ ... +.|..|++.... ....+
T Consensus 199 -~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~-~~d~~~g~i~i~d~~~~~--~~~~~ 274 (397)
T 1sq9_A 199 -LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA-HDSNSFGCITLYETEFGE--RIGSL 274 (397)
T ss_dssp -EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE-EEETTEEEEEEEETTTCC--EEEEE
T ss_pred -eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE-ecCCCCceEEEEECCCCc--cccee
Confidence 233445678899999887766544443 5567899999999866655 455 799999987432 12222
Q ss_pred Ee-------------CCCCCCceEEcCCCCEEEEEecCC
Q 024436 151 AQ-------------LPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 151 ~~-------------l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
.. ..+....++++++|+++++....+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 313 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 313 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS
T ss_pred ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence 21 123356789999998766665544
No 210
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.98 E-value=0.0055 Score=51.94 Aligned_cols=138 Identities=13% Similarity=0.125 Sum_probs=84.6
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc----------CCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART----------SPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
....+++++|+|++++++..|+.|..++............ .+..+++ .....++.+..+|.......
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~s~s~d~~~~~~d~~~~~~~ 163 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI---VSGSRDKTIKLWNTLGVCKY 163 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCE---EEEETTSCEEEECTTSCEEE
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccc---eeecCCCeEEEEEeCCCceE
Confidence 4578899999999999999999999888765432221111 1111222 12334567777877643332
Q ss_pred Eee--cCCCCcceEEEccCCC-EEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 104 VLL--GNLSFPNGVALSEDGN-YILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 104 ~~~--~~~~~pnGia~spdg~-~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
... ......+.+++++++. .++++....+.|..|++..... ...+..-.+....++++++|+++++....+
T Consensus 164 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~--~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 164 TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL--KTNHIGHTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce--eeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 222 2234456788988764 3556777778999999874321 111211123456789999999777665544
No 211
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.98 E-value=0.00088 Score=64.85 Aligned_cols=130 Identities=12% Similarity=0.065 Sum_probs=78.7
Q ss_pred CCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc------------CCC--CCeeEEEeecCCcceEEEEe
Q 024436 31 EGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART------------SPN--RNHISVILSGDKTGRLMKYD 96 (268)
Q Consensus 31 ~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~------------~~~--~~~~~~~~~~~~~g~v~~~d 96 (268)
+.-....+++++|+|++++++..+|.|..|+..+......... .++ +.++ ..+..+|.|..+|
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l---~s~s~Dg~I~vwd 83 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTIL---ASCSYDGKVLIWK 83 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEE---EEEETTSCEEEEE
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEE---EEEeCCCeEEEEE
Confidence 3344678899999999999999999999887653221111111 111 2222 2334567777777
Q ss_pred CCCCeE---EEeecCCCCcceEEEccC--CCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcC
Q 024436 97 PATKQV---TVLLGNLSFPNGVALSED--GNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP 164 (268)
Q Consensus 97 ~~~~~~---~~~~~~~~~pnGia~spd--g~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~ 164 (268)
..+++. ..........+.++|+|+ ++.+ ++-+..+.|..|++..........+...++....+++++
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l-~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p 155 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL-LVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 155 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECC
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEE-EEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecC
Confidence 766653 233344456689999999 8755 455678999999997542211222222223455677777
No 212
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.98 E-value=0.0021 Score=57.51 Aligned_cols=148 Identities=12% Similarity=0.084 Sum_probs=94.3
Q ss_pred CEEEEecCCCCCcceEEECCCCC-EEEEEeCCCeEEEEeCCCC----eE----EEEE---------EcCC-CCCeeEEEe
Q 024436 24 GVVQYQIEGAIGPESLAFDALGE-GPYTGVSDGRIIKWHQDQR----RW----LHFA---------RTSP-NRNHISVIL 84 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~-~l~~~~~~g~I~~~~~~g~----~~----~~~~---------~~~~-~~~~~~~~~ 84 (268)
.+..+.-. .....+++++|++. +++++..+|.|..|+.... .. ..+. ...+ +..++ .
T Consensus 173 ~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l---~ 248 (430)
T 2xyi_A 173 PDLRLRGH-QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLF---G 248 (430)
T ss_dssp CSEEEECC-SSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEE---E
T ss_pred CcEEecCC-CCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEE---E
Confidence 34444433 23578999999998 8999999999999987541 10 1110 0112 11211 2
Q ss_pred ecCCcceEEEEeCCCC----eEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCce
Q 024436 85 SGDKTGRLMKYDPATK----QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNI 160 (268)
Q Consensus 85 ~~~~~g~v~~~d~~~~----~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgi 160 (268)
.....+.|..+|..++ .+..+...-..++.|+|+|+++.++++....+.|..|++.... .....+....+....+
T Consensus 249 s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~~~v~~i 327 (430)
T 2xyi_A 249 SVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQV 327 (430)
T ss_dssp EEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEECCSSCEEEE
T ss_pred EEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEeecCCCCEEEE
Confidence 3345688888888755 2333444456689999999998788888888999999997421 1122332223456789
Q ss_pred EEcCCCC-EEEEEecCC
Q 024436 161 KRSPRGG-FWVGIHSRR 176 (268)
Q Consensus 161 a~d~dG~-l~va~~~~~ 176 (268)
++.++|. ++++....+
T Consensus 328 ~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 328 QWSPHNETILASSGTDR 344 (430)
T ss_dssp EECSSCTTEEEEEETTS
T ss_pred EECCCCCCEEEEEeCCC
Confidence 9999984 666665544
No 213
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.97 E-value=0.00029 Score=61.55 Aligned_cols=135 Identities=13% Similarity=0.020 Sum_probs=80.2
Q ss_pred CcceEEECC-CCCEEEEEeC------CCeEEEEeCCCCeEEE-----------EEEcCCCCCeeE-EEeec-CCcceEEE
Q 024436 35 GPESLAFDA-LGEGPYTGVS------DGRIIKWHQDQRRWLH-----------FARTSPNRNHIS-VILSG-DKTGRLMK 94 (268)
Q Consensus 35 ~P~gia~~~-dG~~l~~~~~------~g~I~~~~~~g~~~~~-----------~~~~~~~~~~~~-~~~~~-~~~g~v~~ 94 (268)
....++++| ||+.++.... ..+|+.++.++..... ....+|++.++. ..... .....|+.
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYS 268 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEE
T ss_pred cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEE
Confidence 356889999 9987654433 3489888876542111 112345554332 21121 12235999
Q ss_pred EeCCCCeEEEeecCC------CCcceEEEccCCCEEEEEe--------cCCcEEEEEEccCCCCCceeEEEeCCC-----
Q 024436 95 YDPATKQVTVLLGNL------SFPNGVALSEDGNYILLAE--------TTSCRILRYWLKTSKAGTIEIVAQLPG----- 155 (268)
Q Consensus 95 ~d~~~~~~~~~~~~~------~~pnGia~spdg~~lyva~--------~~~~~I~~~~~~~~~~g~~~~~~~l~g----- 155 (268)
+|.++++.+.+...- ..+.+++|+|||+.|+++. .....|++++++++. ...+...++
T Consensus 269 ~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~l~~~~~~~~~~ 345 (388)
T 3pe7_A 269 ADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT---QHRVARHDTSWKVF 345 (388)
T ss_dssp ECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE---EEEEEECCCCCCCB
T ss_pred EecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc---eEEeccccCccccc
Confidence 999988876654321 1267789999999888753 456689999998632 333333222
Q ss_pred ------CCCceEEcCCCC-EEEEE
Q 024436 156 ------FPDNIKRSPRGG-FWVGI 172 (268)
Q Consensus 156 ------~Pdgia~d~dG~-l~va~ 172 (268)
....+++++||+ |+.+.
T Consensus 346 ~~~~~~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 346 EGDRQVTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp TTBSSTTCCCCEECTTSSEEEEEE
T ss_pred ccccccCCCCccCCCCCCEEEEEe
Confidence 356789999997 44443
No 214
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.96 E-value=0.0011 Score=56.52 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=73.8
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEEE---------cCCCCCeeEEEeecCCcceEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFAR---------TSPNRNHISVILSGDKTGRLM 93 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~ 93 (268)
.+..+.... ..-..+++.|++++++++..|+.|..|+.. ++....+.. ..++++++. .+..++.|.
T Consensus 47 ~~~~~~~~~-~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~---sgs~D~~v~ 122 (304)
T 2ynn_A 47 EVRSIQVTE-TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVL---SGSDDLTVK 122 (304)
T ss_dssp EEEEEECCS-SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEE---EEETTSCEE
T ss_pred eeEEeeccC-CcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEE---EECCCCeEE
Confidence 445554442 345788999999999999999999999875 443333321 123333332 334567777
Q ss_pred EEeCCCC-eEEE-eecCCCCcceEEEcc-CCCEEEEEecCCcEEEEEEccC
Q 024436 94 KYDPATK-QVTV-LLGNLSFPNGVALSE-DGNYILLAETTSCRILRYWLKT 141 (268)
Q Consensus 94 ~~d~~~~-~~~~-~~~~~~~pnGia~sp-dg~~lyva~~~~~~I~~~~~~~ 141 (268)
.+|.+++ .... +...-...+.++|+| |++ ++++.+..+.|..|++..
T Consensus 123 lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 123 LWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp EEEGGGTTEEEEEECCCCSCEEEEEECTTCTT-EEEEEETTSEEEEEETTC
T ss_pred EEECCCCcchhhhhcccCCcEEEEEECCCCCC-EEEEEeCCCeEEEEECCC
Confidence 7776644 3333 334445568999999 555 556777889999999864
No 215
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.96 E-value=0.00043 Score=60.25 Aligned_cols=139 Identities=12% Similarity=0.028 Sum_probs=80.0
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe----EEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCC
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR----WLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~----~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
....+++++|+|++++++..|+.|..|+..... ...+. ...++..++. .....+.|..+|.+++
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFA---VGSGARVISVCYFEQE 132 (377)
T ss_dssp SCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCE---EEESSSCEEECCC---
T ss_pred ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEE---EEecCCeEEEEEECCc
Confidence 356889999999999999999999888765421 11110 1122222222 2234567777777755
Q ss_pred e----EEEeec-CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCC-------------ceeEEEeC--CCCCCce
Q 024436 101 Q----VTVLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAG-------------TIEIVAQL--PGFPDNI 160 (268)
Q Consensus 101 ~----~~~~~~-~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g-------------~~~~~~~l--~g~Pdgi 160 (268)
+ ...+.. .-...+.++|+||+++|+ +.+..+.|..|++...... .......+ .+....+
T Consensus 133 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 211 (377)
T 3dwl_C 133 NDWWVSKHLKRPLRSTILSLDWHPNNVLLA-AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAV 211 (377)
T ss_dssp --CCCCEEECSSCCSCEEEEEECTTSSEEE-EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEE
T ss_pred ccceeeeEeecccCCCeEEEEEcCCCCEEE-EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEE
Confidence 4 344444 455678999999998665 5556788999998521100 01122222 2235678
Q ss_pred EEcCCCCEEEEEecCC
Q 024436 161 KRSPRGGFWVGIHSRR 176 (268)
Q Consensus 161 a~d~dG~l~va~~~~~ 176 (268)
+++++|+++++....+
T Consensus 212 ~~sp~~~~l~~~~~d~ 227 (377)
T 3dwl_C 212 GFSPSGNALAYAGHDS 227 (377)
T ss_dssp EECTTSSCEEEEETTT
T ss_pred EECCCCCEEEEEeCCC
Confidence 9999998666554443
No 216
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.96 E-value=0.0077 Score=52.41 Aligned_cols=138 Identities=9% Similarity=0.102 Sum_probs=80.3
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCC--
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATK-- 100 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~-- 100 (268)
...-.+++++|||++++++..|+.|..|+... +....+.. .+|++.++. .+..++.+..++....
T Consensus 64 ~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~la---sg~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 64 GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIA---CGGLDNKCSVYPLTFDKN 140 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEE---EESTTSEEEEEECCCCTT
T ss_pred CCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEE---EeeCCCCEEEEEEecccc
Confidence 44678999999999999999999999998643 32222211 123333222 2334455555544311
Q ss_pred -----eEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcC--CCCEEEEEe
Q 024436 101 -----QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP--RGGFWVGIH 173 (268)
Q Consensus 101 -----~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~--dG~l~va~~ 173 (268)
....+.......+.++|+|+++.|+ +.+..+.|..|++..+.. ...+..-......+++.+ +|+++++..
T Consensus 141 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~D~~v~lwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 141 ENMAAKKKSVAMHTNYLSACSFTNSDMQIL-TASGDGTCALWDVESGQL--LQSFHGHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp CCSGGGCEEEEECSSCEEEEEECSSSSEEE-EEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred ccccccceeeeccCCcEEEEEEeCCCCEEE-EEeCCCcEEEEeCCCCeE--EEEEcCCCCCeEEEEEEeCCCCCEEEEEe
Confidence 1223333445567899999998665 666789999999875321 222221112233455654 567666555
Q ss_pred cCC
Q 024436 174 SRR 176 (268)
Q Consensus 174 ~~~ 176 (268)
..+
T Consensus 218 ~Dg 220 (354)
T 2pbi_B 218 CDK 220 (354)
T ss_dssp TTS
T ss_pred CCC
Confidence 444
No 217
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.96 E-value=0.00067 Score=58.92 Aligned_cols=137 Identities=12% Similarity=0.135 Sum_probs=83.6
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE------------cCCCCCeeEEEeecCCcceEEEEeCCCC
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR------------TSPNRNHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
...-.+++++|+|++++++..|+.|..|+.+......... ..+++.++. ....++.|..+|.+++
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~---s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLA---TCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEE---EEETTSCEEEEEECTT
T ss_pred CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEE---EEECCCeEEEEECCCC
Confidence 3457889999999999999999999888754332111111 123333332 2234455666655433
Q ss_pred e----EEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC---CCCCceEEcCCCCEEEEEe
Q 024436 101 Q----VTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP---GFPDNIKRSPRGGFWVGIH 173 (268)
Q Consensus 101 ~----~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~---g~Pdgia~d~dG~l~va~~ 173 (268)
+ +..+.......+.++|+|+++.| ++.+..+.|..|+...+. ......+. +....++++++|+++++..
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~d~~i~~w~~~~~~---~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELL-ASASYDDTVKLYREEEDD---WVCCATLEGHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCE-EEEETTSCEEEEEEETTE---EEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEE-EEEeCCCcEEEEEecCCC---EEEEEEecCCCCceEEEEECCCCCEEEEEe
Confidence 2 22233344456789999999855 555677889999876421 12122222 3456799999998777665
Q ss_pred cCC
Q 024436 174 SRR 176 (268)
Q Consensus 174 ~~~ 176 (268)
..+
T Consensus 214 ~D~ 216 (345)
T 3fm0_A 214 DDR 216 (345)
T ss_dssp TTS
T ss_pred CCC
Confidence 554
No 218
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.94 E-value=0.0045 Score=53.85 Aligned_cols=160 Identities=11% Similarity=-0.032 Sum_probs=88.9
Q ss_pred CCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-------EEEEEEc---------CCC----CCeeEEEeecCCcc
Q 024436 31 EGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-------WLHFART---------SPN----RNHISVILSGDKTG 90 (268)
Q Consensus 31 ~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-------~~~~~~~---------~~~----~~~~~~~~~~~~~g 90 (268)
+.-....+++++| ++++++..+|.|..|+.+... ...+... .++ +.-...+......+
T Consensus 14 ~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg 91 (397)
T 1sq9_A 14 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSG 91 (397)
T ss_dssp CSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTS
T ss_pred hhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCC
Confidence 3345678999998 778999999999999875432 2322211 111 10001122333456
Q ss_pred eEEEEeCCCCe------EEEeecC-----CCCcceEEEc----cCCCEEEEEecCCcEEEEEEccC------CCCCc---
Q 024436 91 RLMKYDPATKQ------VTVLLGN-----LSFPNGVALS----EDGNYILLAETTSCRILRYWLKT------SKAGT--- 146 (268)
Q Consensus 91 ~v~~~d~~~~~------~~~~~~~-----~~~pnGia~s----pdg~~lyva~~~~~~I~~~~~~~------~~~g~--- 146 (268)
.|..+|..+++ ...+... -...+.++|+ |+++.++++-+..+.|..|++.. ...-.
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 171 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP 171 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCC
T ss_pred CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccC
Confidence 66666665554 4444333 2567899999 99987244555678899999875 32111
Q ss_pred eeEEE------e-CCCCCCceEEcCCCCEEEEEecCCCcceeeeEeeC-ccceeeeeccc
Q 024436 147 IEIVA------Q-LPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPI 198 (268)
Q Consensus 147 ~~~~~------~-l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~-~~g~~l~~i~~ 198 (268)
...+. . -......+++.++| ++++....+. |..+. ..++.+..+..
T Consensus 172 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~-----i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 172 TLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGT-----VQISELSTLRPLYNFES 225 (397)
T ss_dssp EEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSE-----EEEEETTTTEEEEEEEC
T ss_pred cceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCc-----EEEEECCCCceeEEEec
Confidence 01232 1 13457889999999 6665555442 33333 34555555443
No 219
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.94 E-value=0.0068 Score=51.22 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=67.4
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCC---eEEEEEEc---------CCC--CCeeEEEeecCCcceEEEEeCC
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR---RWLHFART---------SPN--RNHISVILSGDKTGRLMKYDPA 98 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~---~~~~~~~~---------~~~--~~~~~~~~~~~~~g~v~~~d~~ 98 (268)
-..-..++++|+|++++++..|+.|..|+.++. ....+... .+. +.+ +.+...++.|..+|..
T Consensus 9 ~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~---l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTI---LASCSYDGKVMIWKEE 85 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSE---EEEEETTTEEEEEEBS
T ss_pred cCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCE---EEEEcCCCEEEEEEcC
Confidence 345678999999999999999999998886532 11222110 111 122 2233456777777776
Q ss_pred CCeE---EEeecCCCCcceEEEccC--CCEEEEEecCCcEEEEEEccC
Q 024436 99 TKQV---TVLLGNLSFPNGVALSED--GNYILLAETTSCRILRYWLKT 141 (268)
Q Consensus 99 ~~~~---~~~~~~~~~pnGia~spd--g~~lyva~~~~~~I~~~~~~~ 141 (268)
+++. ..+...-...+.++|+|+ |+.| ++-+..+.|..|++..
T Consensus 86 ~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l-~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPML-LVASSDGKVSVVEFKE 132 (297)
T ss_dssp SSCBCCCEEECCCSSCEEEEEECCGGGCSEE-EEEETTSEEEEEEBCS
T ss_pred CCceEEEEEeecCCCceeEEEeCcCCCCcEE-EEEECCCcEEEEEecC
Confidence 5532 223333445689999998 7655 5566789999999874
No 220
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.94 E-value=0.0077 Score=51.76 Aligned_cols=135 Identities=10% Similarity=0.009 Sum_probs=80.1
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCC--------eEEEEE---------EcCCCCCeeEEEeecCCcceEEEEe
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQR--------RWLHFA---------RTSPNRNHISVILSGDKTGRLMKYD 96 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~--------~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d 96 (268)
..-.+++++|+|++++++..|+.|..|+.... ....+. ..++++.++. ....++.|..+|
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~la---s~s~D~~v~iwd 135 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLA---TCSRDKSVWIWE 135 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEE---EEETTSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEE---EEeCCCEEEEEe
Confidence 45788999999999999999999998876321 111110 1123333332 333456777777
Q ss_pred CCC-C---e-EEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC---CCCCceEEcCC--C
Q 024436 97 PAT-K---Q-VTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP---GFPDNIKRSPR--G 166 (268)
Q Consensus 97 ~~~-~---~-~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~---g~Pdgia~d~d--G 166 (268)
... + + +..+...-...+.++|+|+++.| ++-+..+.|..|+...+ ..+.+..+. +....++++++ +
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~i~iW~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~ 211 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALL-ASSSYDDTVRIWKDYDD---DWECVAVLNGHEGTVWSSDFDKTEGV 211 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEE-EEEETTSCEEEEEEETT---EEEEEEEECCCSSCEEEEEECCSSSS
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEE-EEEcCCCeEEEEECCCC---CeeEEEEccCCCCcEEEEEecCCCCe
Confidence 631 2 2 23334444557899999999854 56677889999987532 112222222 23456788887 5
Q ss_pred CEEEEEecC
Q 024436 167 GFWVGIHSR 175 (268)
Q Consensus 167 ~l~va~~~~ 175 (268)
.++++....
T Consensus 212 ~~l~s~s~D 220 (330)
T 2hes_X 212 FRLCSGSDD 220 (330)
T ss_dssp CEEEEEETT
T ss_pred eEEEEEeCC
Confidence 554444433
No 221
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.93 E-value=0.0056 Score=61.98 Aligned_cols=147 Identities=12% Similarity=0.130 Sum_probs=92.5
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEEc---------CCCCCeeEEEeecCCcceEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFART---------SPNRNHISVILSGDKTGRLM 93 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~~~---------~~~~~~~~~~~~~~~~g~v~ 93 (268)
.+..+.- .-....+++++|+|++++++..++.|..|+... +....+... .+..+.. .+..+..++.|.
T Consensus 649 ~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~sg~~d~~v~ 726 (1249)
T 3sfz_A 649 KLLDIKA-HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHL-LLATGSNDFFLK 726 (1249)
T ss_dssp EEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCC-EEEEEETTSCEE
T ss_pred EEEEecc-CCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCce-EEEEEeCCCeEE
Confidence 3444442 234678999999999999999999999998753 332222211 1111111 112334567888
Q ss_pred EEeCCCCeEEE-eecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe-------------CCCCCCc
Q 024436 94 KYDPATKQVTV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-------------LPGFPDN 159 (268)
Q Consensus 94 ~~d~~~~~~~~-~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~-------------l~g~Pdg 159 (268)
.+|..+++... +.......+.++|+||++.| ++.+..+.|..|++..+.. ...+.. .......
T Consensus 727 vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l-~s~s~dg~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 727 LWDLNQKECRNTMFGHTNSVNHCRFSPDDELL-ASCSADGTLRLWDVRSANE--RKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp EEETTSSSEEEEECCCSSCEEEEEECSSTTEE-EEEESSSEEEEEEGGGTEE--EEEEECCCCC--------CCCCCBCC
T ss_pred EEECCCcchhheecCCCCCEEEEEEecCCCEE-EEEECCCeEEEEeCCCCcc--cceecccccccccCCccccccceEEE
Confidence 88888776543 34444567899999999855 5556778999999874321 111110 1124567
Q ss_pred eEEcCCCCEEEEEecC
Q 024436 160 IKRSPRGGFWVGIHSR 175 (268)
Q Consensus 160 ia~d~dG~l~va~~~~ 175 (268)
+++.++|+.+++...+
T Consensus 804 ~~~s~dg~~l~~~~~~ 819 (1249)
T 3sfz_A 804 CSWSADGDKIIVAAKN 819 (1249)
T ss_dssp CCBCTTSSEEEEEETT
T ss_pred EEECCCCCEEEEEcCC
Confidence 8999999877766544
No 222
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.93 E-value=0.0084 Score=51.99 Aligned_cols=147 Identities=15% Similarity=0.081 Sum_probs=89.0
Q ss_pred cCCCEEEEecCCCCCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCe----EEE--EE-----------------EcCC-
Q 024436 21 STQGVVQYQIEGAIGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRR----WLH--FA-----------------RTSP- 75 (268)
Q Consensus 21 ~~~~~~~i~~~~~~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~----~~~--~~-----------------~~~~- 75 (268)
..+..+.+. +.-....+++++| +|++++++..+|.|..|+.+... ... .. ...+
T Consensus 32 ~~~~~~~~~-~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 110 (408)
T 4a11_B 32 LNKDRDVER-IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH 110 (408)
T ss_dssp ECTTEEECC-CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTT
T ss_pred cCcceeeee-ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccC
Confidence 333444443 3345789999999 99999999999999999875421 110 00 0011
Q ss_pred CCCeeEEEeecCCcceEEEEeCCCCeEEEeecCCCCcceEEEccC---CCEEEEEecCCcEEEEEEccCCCCCceeEEEe
Q 024436 76 NRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPNGVALSED---GNYILLAETTSCRILRYWLKTSKAGTIEIVAQ 152 (268)
Q Consensus 76 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spd---g~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~ 152 (268)
+..++ ......+.|..+|..+++.............++++|. ++.+ ++....+.|..|++..+.. ...+..
T Consensus 111 ~~~~l---~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~d~~~~~~--~~~~~~ 184 (408)
T 4a11_B 111 DTGMF---TSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLV-AVGTRGPKVQLCDLKSGSC--SHILQG 184 (408)
T ss_dssp CTTCE---EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEE-EEEESSSSEEEEESSSSCC--CEEECC
T ss_pred CCcEE---EEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEE-EEEcCCCeEEEEeCCCcce--eeeecC
Confidence 11122 2334567889999887777666555556678999885 4345 4556778999999875321 222221
Q ss_pred CCCCCCceEEcCCCC-EEEEEec
Q 024436 153 LPGFPDNIKRSPRGG-FWVGIHS 174 (268)
Q Consensus 153 l~g~Pdgia~d~dG~-l~va~~~ 174 (268)
..+....+++.++|. ++++...
T Consensus 185 ~~~~v~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 185 HRQEILAVSWSPRYDYILATASA 207 (408)
T ss_dssp CCSCEEEEEECSSCTTEEEEEET
T ss_pred CCCcEEEEEECCCCCcEEEEEcC
Confidence 223355677777775 4444433
No 223
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.92 E-value=0.0033 Score=52.92 Aligned_cols=113 Identities=12% Similarity=0.031 Sum_probs=71.4
Q ss_pred EEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCC-----eEEEEEE---------cCC--CCCeeEEEeecCC
Q 024436 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR-----RWLHFAR---------TSP--NRNHISVILSGDK 88 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~-----~~~~~~~---------~~~--~~~~~~~~~~~~~ 88 (268)
++.+..+.-....+++++|+|++++++..+|.|..|+.+.. ....+.. ..+ ++.++ .....
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l---~s~~~ 79 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRII---ASASY 79 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEE---EEEET
T ss_pred ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEE---EEEcC
Confidence 34455555557899999999999999999999999876532 1111111 112 12222 22334
Q ss_pred cceEEEEeCCCCe----------EEEeecCCCCcceEEEccC--CCEEEEEecCCcEEEEEEccC
Q 024436 89 TGRLMKYDPATKQ----------VTVLLGNLSFPNGVALSED--GNYILLAETTSCRILRYWLKT 141 (268)
Q Consensus 89 ~g~v~~~d~~~~~----------~~~~~~~~~~pnGia~spd--g~~lyva~~~~~~I~~~~~~~ 141 (268)
++.|..+|..+++ ...+...-.....++|+|+ ++.|+ +-+..+.|..|++..
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA-CLGNDGILRLYDALE 143 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTCEEEEEECSS
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEE-EecCCCcEEEecCCC
Confidence 5666666665442 3333344455689999999 87555 555778999999864
No 224
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.92 E-value=0.0028 Score=58.48 Aligned_cols=151 Identities=9% Similarity=0.019 Sum_probs=85.9
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCC-C----CeEEEEE----------EcCC--CCCeeEEEeecCCcceEEEEe
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQD-Q----RRWLHFA----------RTSP--NRNHISVILSGDKTGRLMKYD 96 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g----~~~~~~~----------~~~~--~~~~~~~~~~~~~~g~v~~~d 96 (268)
..+..++++|||++++++. ++.|..++.+ + +....+. ..++ ++.++. ....+|.|..+|
T Consensus 19 ~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~---s~~~dg~v~vw~ 94 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLC---SGDESGKVIVWG 94 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEE---EEETTSEEEEEE
T ss_pred CceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEE---EecCCCEEEEEe
Confidence 5688999999999888776 7788888764 3 2222221 1234 444332 223456676666
Q ss_pred CCCC--------eEE-EeecCCCCcceEEEccCCCEEEEEecCC---cEEEEEEccCCCCCceeEEEeCCCCCCceEEcC
Q 024436 97 PATK--------QVT-VLLGNLSFPNGVALSEDGNYILLAETTS---CRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP 164 (268)
Q Consensus 97 ~~~~--------~~~-~~~~~~~~pnGia~spdg~~lyva~~~~---~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~ 164 (268)
..++ +.. .+.......+.++|+|||++|+++.... +.|+.|+.. . ....+..-.+....+++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~--~--~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG--N--SLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC--C--EEEECCSCSSCEEEEEECS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC--C--cceeeecCCccEEEEEECC
Confidence 6433 222 2333444568999999999887776443 577777621 1 1111111123456789999
Q ss_pred CCC-EEEEEecCCCcceeeeEee-Cccceeeeecc
Q 024436 165 RGG-FWVGIHSRRKGISKLVLSF-PWIGNVLIKLP 197 (268)
Q Consensus 165 dG~-l~va~~~~~~~~~~~v~~~-~~~g~~l~~i~ 197 (268)
+|. ++++....+. +..+ ...++.+..+.
T Consensus 171 ~~~~~l~~~~~d~~-----v~vwd~~~~~~~~~~~ 200 (615)
T 1pgu_A 171 SRPMRSMTVGDDGS-----VVFYQGPPFKFSASDR 200 (615)
T ss_dssp SSSCEEEEEETTTE-----EEEEETTTBEEEEEEC
T ss_pred CCCcEEEEEeCCCc-----EEEEeCCCcceeeeec
Confidence 996 5555544432 3333 24455555544
No 225
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.92 E-value=0.00055 Score=65.12 Aligned_cols=133 Identities=13% Similarity=0.094 Sum_probs=82.2
Q ss_pred CcceEEECCCCCEEEEEeCC-----CeEEEEeCCCC-eEEEEE--------------EcCC--CCCeeEEEeecCCcceE
Q 024436 35 GPESLAFDALGEGPYTGVSD-----GRIIKWHQDQR-RWLHFA--------------RTSP--NRNHISVILSGDKTGRL 92 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~-----g~I~~~~~~g~-~~~~~~--------------~~~~--~~~~~~~~~~~~~~g~v 92 (268)
.+..++++|||+.+++...+ ..|..++.++. ...... ..++ ++.++. ........+|
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~-~~~~~g~~~l 337 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIW-QSRRDGWNHL 337 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEE-EECTTSSCEE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEE-EEccCCccEE
Confidence 35689999999977765443 38888887654 332221 1123 333332 1122345689
Q ss_pred EEEeCCCCeEEEeecCCCCcce-EEEccCCCEEEEEecCCc----EEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCC
Q 024436 93 MKYDPATKQVTVLLGNLSFPNG-VALSEDGNYILLAETTSC----RILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGG 167 (268)
Q Consensus 93 ~~~d~~~~~~~~~~~~~~~pnG-ia~spdg~~lyva~~~~~----~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~ 167 (268)
|.++.+++.++.+..+...... ++|+|||+.||++....+ +|++++.+++. ...+.. ......+++++||+
T Consensus 338 ~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~-~~~~~~~~~spdg~ 413 (706)
T 2z3z_A 338 YLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK---TKDLTP-ESGMHRTQLSPDGS 413 (706)
T ss_dssp EEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC---CEESCC-SSSEEEEEECTTSS
T ss_pred EEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC---ceeccC-CCceEEEEECCCCC
Confidence 9999765666666544322334 799999999999877654 88888887532 222221 12356789999998
Q ss_pred EEEEE
Q 024436 168 FWVGI 172 (268)
Q Consensus 168 l~va~ 172 (268)
.++..
T Consensus 414 ~l~~~ 418 (706)
T 2z3z_A 414 AIIDI 418 (706)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65544
No 226
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.89 E-value=0.0076 Score=51.01 Aligned_cols=138 Identities=16% Similarity=0.129 Sum_probs=85.8
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE-----------cCCCCCeeEEEeecCCcceEEEEeCCCCe
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR-----------TSPNRNHISVILSGDKTGRLMKYDPATKQ 101 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 101 (268)
........+.++++.++++..++.+..++..+........ ..+..... .+......+.|..+|..+++
T Consensus 128 ~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~s~~~d~~i~i~d~~~~~ 206 (340)
T 4aow_A 128 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP-IIVSCGWDKLVKVWNLANCK 206 (340)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSC-EEEEEETTSCEEEEETTTTE
T ss_pred CCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCc-EEEEEcCCCEEEEEECCCCc
Confidence 3467778889999999999999999888876542111110 01111111 11223345678888888776
Q ss_pred EEEeec-CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecC
Q 024436 102 VTVLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 102 ~~~~~~-~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~ 175 (268)
...... .-...+.++|+|||++| ++.+..+.|..|++.... ....+ ........+++.+++.++.+...+
T Consensus 207 ~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~Dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~~~~~d~ 277 (340)
T 4aow_A 207 LKTNHIGHTGYLNTVTVSPDGSLC-ASGGKDGQAMLWDLNEGK--HLYTL-DGGDIINALCFSPNRYWLCAATGP 277 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEE-EEEETTCEEEEEETTTTE--EEEEE-ECSSCEEEEEECSSSSEEEEEETT
T ss_pred eeeEecCCCCcEEEEEECCCCCEE-EEEeCCCeEEEEEeccCc--eeeee-cCCceEEeeecCCCCceeeccCCC
Confidence 654443 33445789999999855 455677899999987421 11111 122345677888888877766554
No 227
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.88 E-value=0.005 Score=51.42 Aligned_cols=213 Identities=12% Similarity=0.028 Sum_probs=117.6
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCC----CeEEEEEEcC-------CCCCeeEEEeecCCcceEEEEeCCCCeE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQ----RRWLHFARTS-------PNRNHISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g----~~~~~~~~~~-------~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
.....++++|+++.++++..++.|..++... +....+.... .+..+ ++....++.|..+|.. ...
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~~~~~d~~i~~~d~~-~~~ 135 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGV---VISGSWDKTAKVWKEG-SLV 135 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTE---EEEEETTSEEEEEETT-EEE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecCCE---EEEEeCCCCEEEEcCC-cEE
Confidence 4688999999999999999999998776432 1111110000 01111 2233456788888843 334
Q ss_pred EEeecCCCCcceEEEcc-CCCEEEEEecCCcEEEEEEccCCCCCceeEEEe-CCCCCCceEEcCCCCEEEEEecCCCcce
Q 024436 103 TVLLGNLSFPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVGIHSRRKGIS 180 (268)
Q Consensus 103 ~~~~~~~~~pnGia~sp-dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~dG~l~va~~~~~~~~~ 180 (268)
..+.........+++.| +++.++ +.+..+.|..|+... ....+.. .......+++.++|.++++...+.
T Consensus 136 ~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~---- 206 (313)
T 3odt_A 136 YNLQAHNASVWDAKVVSFSENKFL-TASADKTIKLWQNDK----VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGL---- 206 (313)
T ss_dssp EEEECCSSCEEEEEEEETTTTEEE-EEETTSCEEEEETTE----EEEEECSSCSSCEEEEEEEETTEEEEEETTSE----
T ss_pred EecccCCCceeEEEEccCCCCEEE-EEECCCCEEEEecCc----eEEEEeccCcccEEEEEEcCCCeEEEccCCCe----
Confidence 44445555667899988 887655 555678999998431 1222222 234567788988888555544432
Q ss_pred eeeEeeC-ccceeeeeccccceeeeeec-c------ccCCCcEEEEEECC-CCCEEEEEEcCCCCceeceEEEEE-eCCE
Q 024436 181 KLVLSFP-WIGNVLIKLPIDIVKIHSSL-V------KLSGNGGMAMRISE-QGNVLEILEEIGRKMWRSISEVEE-KDGN 250 (268)
Q Consensus 181 ~~v~~~~-~~g~~l~~i~~~~~~~~~~~-~------~~~~~~~~~~~~~~-~G~~~~~~~~~~g~~~~~~s~~~~-~~g~ 250 (268)
|..+. ..++.+..+......++++. . ..... +.+...+. +++.+..+..+.+ .++.+.. .+++
T Consensus 207 --i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d-g~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~~~~~ 279 (313)
T 3odt_A 207 --IKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGED-RTVRIWSKENGSLKQVITLPAI----SIWSVDCMSNGD 279 (313)
T ss_dssp --EEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETT-SEEEEECTTTCCEEEEEECSSS----CEEEEEECTTSC
T ss_pred --EEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecC-CEEEEEECCCCceeEEEeccCc----eEEEEEEccCCC
Confidence 33332 34555554432222222211 0 01111 34555554 4666666665432 2444444 4566
Q ss_pred EEEeeCCCCeEEEEeCC
Q 024436 251 LWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 251 Lyv~s~~~~~v~~~~~~ 267 (268)
++ +...+..|.+.+++
T Consensus 280 ~~-~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 280 II-VGSSDNLVRIFSQE 295 (313)
T ss_dssp EE-EEETTSCEEEEESC
T ss_pred EE-EEeCCCcEEEEeCC
Confidence 54 45567788887765
No 228
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.87 E-value=0.0017 Score=57.21 Aligned_cols=139 Identities=10% Similarity=0.027 Sum_probs=87.4
Q ss_pred CCcceEEECCCC-CEEEEEeCCCeEEEEeCCCCeE-EEEE-----------EcCCCCCeeEEEeecCCcceEEEEeCCCC
Q 024436 34 IGPESLAFDALG-EGPYTGVSDGRIIKWHQDQRRW-LHFA-----------RTSPNRNHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 34 ~~P~gia~~~dG-~~l~~~~~~g~I~~~~~~g~~~-~~~~-----------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
....+++++|+| ++++++..++.|..|+...... ..+. ...+++.++. ....++.|..+|..++
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC---TSCRDKRVRVIEPRKG 208 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE---EEETTSEEEEEETTTT
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE---EEecCCcEEEEeCCCC
Confidence 467889999998 6888999999999998754422 2220 0112222222 3345688999999877
Q ss_pred eEEEee-cCCC--CcceEEEccCCCEEEEEe--cCCcEEEEEEccCCCCCceeEEE-eCCCCCCceEEcCCCCEEE-EEe
Q 024436 101 QVTVLL-GNLS--FPNGVALSEDGNYILLAE--TTSCRILRYWLKTSKAGTIEIVA-QLPGFPDNIKRSPRGGFWV-GIH 173 (268)
Q Consensus 101 ~~~~~~-~~~~--~pnGia~spdg~~lyva~--~~~~~I~~~~~~~~~~g~~~~~~-~l~g~Pdgia~d~dG~l~v-a~~ 173 (268)
+..... .... .+..++|+||++.|+++. +..+.|..|++...... ..... ........++++++|++++ +..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~g~ 287 (402)
T 2aq5_A 209 TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP-LSLQELDTSSGVLLPFFDPDTNIVYLCGK 287 (402)
T ss_dssp EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC-SEEEECCCCSSCEEEEEETTTTEEEEEET
T ss_pred ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC-ceEEeccCCCceeEEEEcCCCCEEEEEEc
Confidence 665443 2222 368999999997554432 57789999999753211 11111 1223467889999998654 443
Q ss_pred cCC
Q 024436 174 SRR 176 (268)
Q Consensus 174 ~~~ 176 (268)
..+
T Consensus 288 ~dg 290 (402)
T 2aq5_A 288 GDS 290 (402)
T ss_dssp TCS
T ss_pred CCC
Confidence 333
No 229
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.86 E-value=0.0021 Score=54.95 Aligned_cols=136 Identities=14% Similarity=0.091 Sum_probs=82.5
Q ss_pred CCcceEEECCC---CCEEEEEeCCCeEEEEeCCCC--eEEEEEE---------------cCCCCCeeEEEeecCCcceEE
Q 024436 34 IGPESLAFDAL---GEGPYTGVSDGRIIKWHQDQR--RWLHFAR---------------TSPNRNHISVILSGDKTGRLM 93 (268)
Q Consensus 34 ~~P~gia~~~d---G~~l~~~~~~g~I~~~~~~g~--~~~~~~~---------------~~~~~~~~~~~~~~~~~g~v~ 93 (268)
....++++.|+ |++++++..++.|..|+.... ....+.. .+++.+++ ......+.|.
T Consensus 66 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l---~~~~~d~~i~ 142 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEI---VTGSRDGTVK 142 (357)
T ss_dssp SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEE---EEEETTSCEE
T ss_pred CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEE---EEEeCCCeEE
Confidence 46789999999 698999999999999986532 1122110 01222222 2334567888
Q ss_pred EEeCCCCe--EEEeecCC----CCcceEE----EccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEc
Q 024436 94 KYDPATKQ--VTVLLGNL----SFPNGVA----LSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRS 163 (268)
Q Consensus 94 ~~d~~~~~--~~~~~~~~----~~pnGia----~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d 163 (268)
.+|..+++ +..+.... ...+.++ ++|+++.|+ +....+.|..|++.... .............++++
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~---~~~~~~~~~~v~~~~~~ 218 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVC-AGYDNGDIKLFDLRNMA---LRWETNIKNGVCSLEFD 218 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEE-EEETTSEEEEEETTTTE---EEEEEECSSCEEEEEES
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEE-EEccCCeEEEEECccCc---eeeecCCCCceEEEEcC
Confidence 88887654 33332111 1334556 789998665 44567899999997532 22222234457789999
Q ss_pred C---CCCEEEEEecCC
Q 024436 164 P---RGGFWVGIHSRR 176 (268)
Q Consensus 164 ~---dG~l~va~~~~~ 176 (268)
+ +|+++++....+
T Consensus 219 ~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 219 RKDISMNKLVATSLEG 234 (357)
T ss_dssp CSSSSCCEEEEEESTT
T ss_pred CCCCCCCEEEEECCCC
Confidence 8 888666555444
No 230
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.86 E-value=0.0028 Score=55.04 Aligned_cols=142 Identities=12% Similarity=0.124 Sum_probs=88.7
Q ss_pred CCcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEc---------CCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 34 IGPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFART---------SPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 34 ~~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
....++++.| ++++++++..++.|..|+.+.......... .+..+....+......+.|..+|..+++..
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 4678899999 788888888999999999765432221111 111110001223345678888888766543
Q ss_pred E-eecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE---------------eCCCCCCceEEcCCCC
Q 024436 104 V-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA---------------QLPGFPDNIKRSPRGG 167 (268)
Q Consensus 104 ~-~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~---------------~l~g~Pdgia~d~dG~ 167 (268)
. +.......+.++|+|++++++++....+.|..|++..... ....+. ...+....++++++|+
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 258 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASG-CLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL 258 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSC-CSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCc-ccccccccccccceeeccccccccCceeEEEEcCCCC
Confidence 3 3334455689999999987777777889999999864220 011110 0112356789999998
Q ss_pred EEEEEecCC
Q 024436 168 FWVGIHSRR 176 (268)
Q Consensus 168 l~va~~~~~ 176 (268)
++++....+
T Consensus 259 ~l~~~~~dg 267 (408)
T 4a11_B 259 HLLTVGTDN 267 (408)
T ss_dssp EEEEEETTS
T ss_pred EEEEecCCC
Confidence 766665554
No 231
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.86 E-value=0.0022 Score=61.84 Aligned_cols=103 Identities=17% Similarity=0.046 Sum_probs=68.7
Q ss_pred cceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE---------------EcCCCCCeeEEEeec------CCcceEEE
Q 024436 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFA---------------RTSPNRNHISVILSG------DKTGRLMK 94 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~---------------~~~~~~~~~~~~~~~------~~~g~v~~ 94 (268)
-.++++.|||++++++ ++.|..++.++.....+. ..+|++.++.-.... ...+.++.
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 4578999999977775 899999987543222221 114555443221111 12377899
Q ss_pred EeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCC
Q 024436 95 YDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 142 (268)
Q Consensus 95 ~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~ 142 (268)
+|.++++.+.+......-...+|||||+.|.++. .+.|+.++.+++
T Consensus 97 ~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~ 142 (740)
T 4a5s_A 97 YDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNL 142 (740)
T ss_dssp EETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTS
T ss_pred EECCCCcEEEcccCCCcceeeEECCCCCEEEEEE--CCeEEEEECCCC
Confidence 9999888776655444567899999999776663 478999988753
No 232
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.85 E-value=0.0013 Score=62.63 Aligned_cols=89 Identities=9% Similarity=0.061 Sum_probs=58.7
Q ss_pred cceEEECCCCCEEEEEeC---------CCeEEEEeCCCCeE---EEE------EEcCCCCCeeEEEeecCCcceEEEEeC
Q 024436 36 PESLAFDALGEGPYTGVS---------DGRIIKWHQDQRRW---LHF------ARTSPNRNHISVILSGDKTGRLMKYDP 97 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~---------~g~I~~~~~~g~~~---~~~------~~~~~~~~~~~~~~~~~~~g~v~~~d~ 97 (268)
...++++|||+.+++... ++.|+.++.++... ..+ ...+|++.++.-. ..+.|+.++.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~----~~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYV----YQNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEE----ETTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEE----ECCeEEEEeC
Confidence 678999999998876654 58899998766533 111 1234555544322 2468999998
Q ss_pred CCCeEEEeecCC-------------------CCcceEEEccCCCEEEEEe
Q 024436 98 ATKQVTVLLGNL-------------------SFPNGVALSEDGNYILLAE 128 (268)
Q Consensus 98 ~~~~~~~~~~~~-------------------~~pnGia~spdg~~lyva~ 128 (268)
++++...+.... ....+++|||||++|+++.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 877766553211 1225899999999888764
No 233
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.85 E-value=0.0023 Score=60.96 Aligned_cols=136 Identities=16% Similarity=0.152 Sum_probs=89.4
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE-------------cCCCCCeeEEEeecCCcceEEEEeCCCC
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR-------------TSPNRNHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
....+++++|+|+.++++..|+.|..|+..+........ ..++... ..+.....++.|..+|..++
T Consensus 473 ~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~s~d~~v~vwd~~~~ 551 (694)
T 3dm0_A 473 KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ-PTIVSASWDKTVKVWNLSNC 551 (694)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS-CEEEEEETTSCEEEEETTTC
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc-ceEEEEeCCCeEEEEECCCC
Confidence 467899999999999999999999999876543222111 0111100 01223345677888888766
Q ss_pred eEEEe-ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC--CCCCCceEEcCCCCEEEEEecCC
Q 024436 101 QVTVL-LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL--PGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 101 ~~~~~-~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l--~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
+.... ..+-...+.++|+|||++ +++.+..+.|..|++..+ +.+..+ ......+++++++.++++.....
T Consensus 552 ~~~~~~~~h~~~v~~v~~spdg~~-l~sg~~Dg~i~iwd~~~~-----~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~ 624 (694)
T 3dm0_A 552 KLRSTLAGHTGYVSTVAVSPDGSL-CASGGKDGVVLLWDLAEG-----KKLYSLEANSVIHALCFSPNRYWLCAATEHG 624 (694)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSE-EEEEETTSBCEEEETTTT-----EEEECCBCSSCEEEEEECSSSSEEEEEETTE
T ss_pred cEEEEEcCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCCC-----ceEEEecCCCcEEEEEEcCCCcEEEEEcCCC
Confidence 65443 344455689999999985 456677899999998742 122222 23466789999998777766543
No 234
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.82 E-value=0.0019 Score=55.22 Aligned_cols=104 Identities=14% Similarity=0.047 Sum_probs=71.6
Q ss_pred CCcceEEECCC----CCEEEEEeCCCeEEEEeCC-CCeEEEEEE---------cCC-CCCeeEEEeecCCcceEEEEeCC
Q 024436 34 IGPESLAFDAL----GEGPYTGVSDGRIIKWHQD-QRRWLHFAR---------TSP-NRNHISVILSGDKTGRLMKYDPA 98 (268)
Q Consensus 34 ~~P~gia~~~d----G~~l~~~~~~g~I~~~~~~-g~~~~~~~~---------~~~-~~~~~~~~~~~~~~g~v~~~d~~ 98 (268)
....++++.|+ |++++++..+|.|..|+.. ++....+.. ..+ ++.++ .....++.|..+|..
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l---~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLL---LSVSKDHALRLWNIQ 146 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEE---EEEETTSCEEEEETT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEE---EEEeCCCeEEEEEee
Confidence 35788999999 6789999999999999865 333222221 122 22322 233456788889988
Q ss_pred CCeEEEee----cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC
Q 024436 99 TKQVTVLL----GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT 141 (268)
Q Consensus 99 ~~~~~~~~----~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~ 141 (268)
+++..... ........++|+|+++.|+. ....+.|..|++..
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMS-CGMDHSLKLWRINS 192 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEE-EETTSCEEEEESCS
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEE-ecCCCCEEEEECCC
Confidence 77665544 34456789999999986654 45678999999874
No 235
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.82 E-value=4.5e-05 Score=71.21 Aligned_cols=78 Identities=18% Similarity=0.226 Sum_probs=55.6
Q ss_pred CCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCeeEEEeecCCcceEEEEeCCCCeEEEeecC--C
Q 024436 32 GAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNHISVILSGDKTGRLMKYDPATKQVTVLLGN--L 109 (268)
Q Consensus 32 ~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~ 109 (268)
.+..|.+|+|+++|.++++....-. .++. ++...+..+|++++++|+++.+... .
T Consensus 474 ~fnsPDnL~fd~~G~LWf~TD~~~~-----~~g~------------------~~~~gnn~v~~~dp~tGel~~fl~~P~~ 530 (592)
T 4a9v_A 474 MFNSPDGLGFDKAGRLWILTDGDSS-----NAGD------------------FAGMGNNQMLCADPATGEIRRFMVGPIG 530 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCC-----CSGG------------------GTTCCSCEEEEECTTTCCEEEEEECCTT
T ss_pred ccCCCCceEECCCCCEEEEeCCCcC-----cccc------------------ccccCCceEEEEeCCCCeEEEEEeCCCC
Confidence 3688999999999997774321110 0111 1223456899999988999888754 4
Q ss_pred CCcceEEEccCCCEEEEEecCCc
Q 024436 110 SFPNGVALSEDGNYILLAETTSC 132 (268)
Q Consensus 110 ~~pnGia~spdg~~lyva~~~~~ 132 (268)
..|||++|+||+++|||+-..-+
T Consensus 531 aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 531 CEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CEEEEEEECTTSSEEEEEEESTT
T ss_pred ccccCCEECCCCCEEEEEEeCCC
Confidence 67999999999999999865433
No 236
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.81 E-value=0.0002 Score=66.90 Aligned_cols=65 Identities=22% Similarity=0.312 Sum_probs=49.2
Q ss_pred CCCCcceEEEccCCCEEEE-EecC-----------CcEEEEEEccCCCCCceeEEEeCC--CCCCceEEcCCCC-EEEEE
Q 024436 108 NLSFPNGVALSEDGNYILL-AETT-----------SCRILRYWLKTSKAGTIEIVAQLP--GFPDNIKRSPRGG-FWVGI 172 (268)
Q Consensus 108 ~~~~pnGia~spdg~~lyv-a~~~-----------~~~I~~~~~~~~~~g~~~~~~~l~--g~Pdgia~d~dG~-l~va~ 172 (268)
.+..||+|+|+++|. ||+ +|.. ++.+++++.+. ++...|...| ..|.|++++||++ |||+.
T Consensus 474 ~fnsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t---Gel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 474 MFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPAT---GEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTT---CCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred ccCCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCC---CeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 478899999999996 888 7753 34788887754 3456666543 3589999999996 89988
Q ss_pred ecCC
Q 024436 173 HSRR 176 (268)
Q Consensus 173 ~~~~ 176 (268)
...+
T Consensus 550 QHPG 553 (592)
T 4a9v_A 550 QHPG 553 (592)
T ss_dssp ESTT
T ss_pred eCCC
Confidence 6554
No 237
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.77 E-value=0.0044 Score=52.92 Aligned_cols=106 Identities=8% Similarity=0.037 Sum_probs=75.4
Q ss_pred CCCcceEEECCC---CCEEEEEeCCCeEEEEeCC--CCeE-EEEEE---------cCCCCCeeEEEeecCCcceEEEEeC
Q 024436 33 AIGPESLAFDAL---GEGPYTGVSDGRIIKWHQD--QRRW-LHFAR---------TSPNRNHISVILSGDKTGRLMKYDP 97 (268)
Q Consensus 33 ~~~P~gia~~~d---G~~l~~~~~~g~I~~~~~~--g~~~-~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~ 97 (268)
-..-.+++++|+ |++++++..+|.|..|+.+ +... ..+.. ..+++.++. ....++.|..+|.
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~---s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF---TASCDKTAKMWDL 115 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE---EEETTSEEEEEET
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE---EEcCCCcEEEEEc
Confidence 457899999999 6989999999999988865 3332 22211 123333332 3345688999999
Q ss_pred CCCeEEEeecCCCCcceEEE--ccCCCEEEEEecCCcEEEEEEccCC
Q 024436 98 ATKQVTVLLGNLSFPNGVAL--SEDGNYILLAETTSCRILRYWLKTS 142 (268)
Q Consensus 98 ~~~~~~~~~~~~~~pnGia~--spdg~~lyva~~~~~~I~~~~~~~~ 142 (268)
.+++.......-...+.++| +|+++.| ++.+..+.|..|++..+
T Consensus 116 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 116 SSNQAIQIAQHDAPVKTIHWIKAPNYSCV-MTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp TTTEEEEEEECSSCEEEEEEEECSSCEEE-EEEETTSEEEEECSSCS
T ss_pred CCCCceeeccccCceEEEEEEeCCCCCEE-EEccCCCcEEEEECCCC
Confidence 88887776666666789999 8998645 55567789999998753
No 238
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.77 E-value=0.0022 Score=54.79 Aligned_cols=148 Identities=9% Similarity=0.049 Sum_probs=82.8
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEE-EEeC---CCeEEEEeCCCCeEEEE---EE--------cCCC---CCeeEEEee
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPY-TGVS---DGRIIKWHQDQRRWLHF---AR--------TSPN---RNHISVILS 85 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~-~~~~---~g~I~~~~~~g~~~~~~---~~--------~~~~---~~~~~~~~~ 85 (268)
-++.+..+.-....+++++|+|..++ ++.. ++.|..|+.++...... .. ..++ +.++. .
T Consensus 9 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~---~ 85 (357)
T 3i2n_A 9 IIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLA---T 85 (357)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEE---E
T ss_pred HhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEE---E
Confidence 44444444445789999999996554 4444 89999888654322211 11 1232 23222 3
Q ss_pred cCCcceEEEEeCCCCe--EEEeecCCCCcceE------EEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCC--
Q 024436 86 GDKTGRLMKYDPATKQ--VTVLLGNLSFPNGV------ALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPG-- 155 (268)
Q Consensus 86 ~~~~g~v~~~d~~~~~--~~~~~~~~~~pnGi------a~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g-- 155 (268)
+..++.|..+|..+++ +..+.......+.+ +|+||++.|+ +....+.|..|++..+.. ....+....+
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~-~~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~ 163 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIV-TGSRDGTVKVWDPRQKDD-PVANMEPVQGEN 163 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEE-EEETTSCEEEECTTSCSS-CSEEECCCTTSC
T ss_pred ecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEE-EEeCCCeEEEEeCCCCCC-cceeccccCCCC
Confidence 3456778888877654 33444343445566 5678998665 555778999999875321 1222221111
Q ss_pred --CCCceE----EcCCCCEEEEEecCC
Q 024436 156 --FPDNIK----RSPRGGFWVGIHSRR 176 (268)
Q Consensus 156 --~Pdgia----~d~dG~l~va~~~~~ 176 (268)
....++ ++++|+++++....+
T Consensus 164 ~~~v~~~~~~~~~~~~~~~l~~~~~d~ 190 (357)
T 3i2n_A 164 KRDCWTVAFGNAYNQEERVVCAGYDNG 190 (357)
T ss_dssp CCCEEEEEEECCCC-CCCEEEEEETTS
T ss_pred CCceEEEEEEeccCCCCCEEEEEccCC
Confidence 122334 678898777666554
No 239
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.76 E-value=0.00056 Score=58.38 Aligned_cols=136 Identities=9% Similarity=0.037 Sum_probs=84.2
Q ss_pred CCcceEEECCCCC-EEEEEeCCCeEEEEeC-CCCeEEEEEE--c---------CCCCCeeEEEeecCCcceEEEEeCCC-
Q 024436 34 IGPESLAFDALGE-GPYTGVSDGRIIKWHQ-DQRRWLHFAR--T---------SPNRNHISVILSGDKTGRLMKYDPAT- 99 (268)
Q Consensus 34 ~~P~gia~~~dG~-~l~~~~~~g~I~~~~~-~g~~~~~~~~--~---------~~~~~~~~~~~~~~~~g~v~~~d~~~- 99 (268)
....+++++|+|+ .++++..+|.|..|+. ++.....+.. . .+ ..+ ++....++.|..+|..+
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~---l~s~~~d~~i~iwd~~~~ 132 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDK---LIAASWDGLIEVIDPRNY 132 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTE---EEEEETTSEEEEECHHHH
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCE---EEEEcCCCeEEEEccccc
Confidence 4688999999999 9999999999999997 6543322211 0 11 111 12333456777777653
Q ss_pred --------CeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC-CCCCceeEEEeCCCCCCceEEcC-CCCEE
Q 024436 100 --------KQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT-SKAGTIEIVAQLPGFPDNIKRSP-RGGFW 169 (268)
Q Consensus 100 --------~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~-~~~g~~~~~~~l~g~Pdgia~d~-dG~l~ 169 (268)
++.......-.....++++|++ +++ .+..+.|..|++.. ...............+..+++.+ +|+++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l 209 (342)
T 1yfq_A 133 GDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIV-GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGY 209 (342)
T ss_dssp TTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEE-EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEE
T ss_pred ccccccccCCeeeEEeeCCceEEEEecCCc--EEE-EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEE
Confidence 2222122233456789999986 544 45678999999875 32111111112234567899999 99877
Q ss_pred EEEecCC
Q 024436 170 VGIHSRR 176 (268)
Q Consensus 170 va~~~~~ 176 (268)
++....+
T Consensus 210 ~~~~~dg 216 (342)
T 1yfq_A 210 ACSSIDG 216 (342)
T ss_dssp EEEETTS
T ss_pred EEEecCC
Confidence 6665554
No 240
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.74 E-value=0.0078 Score=57.56 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=58.5
Q ss_pred CCCCCeeEEEeecCC--cceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCC---------------cEEEE
Q 024436 74 SPNRNHISVILSGDK--TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTS---------------CRILR 136 (268)
Q Consensus 74 ~~~~~~~~~~~~~~~--~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~---------------~~I~~ 136 (268)
+|++.++.-.....+ ...|+.+|.++++.......-....+++|+|||+.||++.... .+|++
T Consensus 133 SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~ 212 (710)
T 2xdw_A 133 SEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYY 212 (710)
T ss_dssp CTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEE
T ss_pred CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEE
Confidence 455554432222222 2389999999887765321111246799999999998875432 35999
Q ss_pred EEccCCCCCceeEEEeCC---CCCCceEEcCCCC-EEEEEe
Q 024436 137 YWLKTSKAGTIEIVAQLP---GFPDNIKRSPRGG-FWVGIH 173 (268)
Q Consensus 137 ~~~~~~~~g~~~~~~~l~---g~Pdgia~d~dG~-l~va~~ 173 (268)
+++.++.... ..+.+.+ ....++++++||+ |+++..
T Consensus 213 ~~l~t~~~~~-~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 213 HVLGTDQSED-ILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp EETTSCGGGC-EEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred EECCCCcccc-eEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 9987543211 2222322 2234789999998 444443
No 241
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.74 E-value=0.0018 Score=65.53 Aligned_cols=135 Identities=11% Similarity=0.018 Sum_probs=91.0
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeEEE
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 104 (268)
....++++|+|+.++++..+|.|..++... +....+.. .++++.++. ....++.|..+|..+++...
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~---s~~~dg~i~vwd~~~~~~~~ 1039 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLI---SSSEDSVIQVWNWQTGDYVF 1039 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEE---EECSSSBEEEEETTTTEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEE---EEcCCCEEEEEECCCCceEE
Confidence 577899999999999999999999998643 32222111 122333332 33567889999998887766
Q ss_pred eecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 105 LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 105 ~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
..........++++|+++ + ++-+..+.|..|++..+.. ...+..-.+....+++.++|+++++....+
T Consensus 1040 ~~~~~~~v~~~~~~~~~~-l-~~~~~dg~v~vwd~~~~~~--~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~ 1107 (1249)
T 3sfz_A 1040 LQAHQETVKDFRLLQDSR-L-LSWSFDGTVKVWNVITGRI--ERDFTCHQGTVLSCAISSDATKFSSTSADK 1107 (1249)
T ss_dssp CBCCSSCEEEEEECSSSE-E-EEEESSSEEEEEETTTTCC--CEEEECCSSCCCCEEECSSSSSCEEECCSS
T ss_pred EecCCCcEEEEEEcCCCc-E-EEEECCCcEEEEECCCCce--eEEEcccCCcEEEEEECCCCCEEEEEcCCC
Confidence 655556677899999874 4 3555678999999975432 233332234567899999998666554443
No 242
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.72 E-value=0.00015 Score=67.69 Aligned_cols=129 Identities=16% Similarity=0.005 Sum_probs=81.2
Q ss_pred ceEEECCCCCEEEEEeCC----CeEEEEeCCCCeEEEE---------EEcCCCCCeeEEEeecCCcceEEEEeCCCCeEE
Q 024436 37 ESLAFDALGEGPYTGVSD----GRIIKWHQDQRRWLHF---------ARTSPNRNHISVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 37 ~gia~~~dG~~l~~~~~~----g~I~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
..++++|||+.++....+ ..|++++.++.....+ ...+|++.++. .........|+.+|.++++.+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTA-GLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEE-EEECSSCEEEEEECTTTCCEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEE-EccCCCeeEEEEEcCCCCcEE
Confidence 788999999988865543 6788998654322222 12356666555 222223348999999988877
Q ss_pred EeecCCCCcceEE--------EccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecC
Q 024436 104 VLLGNLSFPNGVA--------LSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 104 ~~~~~~~~pnGia--------~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~ 175 (268)
.+......+.+++ |+||| .+|++....+++..|.+ +. .. ....+....++++ +|++++.....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~----~~--~~~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 232 DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-GE----RV--EAPQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-TE----EE--CCCSSEEEEEEEE-TTEEEEEEEET
T ss_pred EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-CC----ee--ccCCCceEEEEec-CCEEEEEEcCC
Confidence 3332223344566 99999 57777777788888887 41 11 1222345578888 88876654433
No 243
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.72 E-value=0.023 Score=50.42 Aligned_cols=232 Identities=13% Similarity=0.098 Sum_probs=121.8
Q ss_pred CEEEEecCC-CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEEcCCCCCe-e----EEEeecCCcceEEEEe
Q 024436 24 GVVQYQIEG-AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFARTSPNRNH-I----SVILSGDKTGRLMKYD 96 (268)
Q Consensus 24 ~~~~i~~~~-~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~~~~~~~~~-~----~~~~~~~~~g~v~~~d 96 (268)
.++.+...+ ...-.+++++|||++++++..||.|..|+..... +..+... ..+.. + ..+..+...+.+..+|
T Consensus 137 ~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h-~~~v~~~s~~~~~l~sgs~d~~i~~~d 215 (420)
T 4gga_A 137 ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH-SARVGSLSWNSYILSSGSRSGHIHHHD 215 (420)
T ss_dssp EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEETTEEEEEETTSEEEEEE
T ss_pred EEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCC-CCceEEEeeCCCEEEEEeCCCceeEee
Confidence 455555543 2345899999999999999999999999976432 2222110 00000 0 0112334566777777
Q ss_pred CCCC--eEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCc--eeEEEeCCCCCCceEEcCCC-CEEEE
Q 024436 97 PATK--QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT--IEIVAQLPGFPDNIKRSPRG-GFWVG 171 (268)
Q Consensus 97 ~~~~--~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~--~~~~~~l~g~Pdgia~d~dG-~l~va 171 (268)
.... .+..+........++.++|+|+.+ ++....+.+..|+...+.... ........+....+++.+++ ++++.
T Consensus 216 ~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l-~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~ 294 (420)
T 4gga_A 216 VRVAEHHVATLSGHSQEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT 294 (420)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEE
T ss_pred ecccceeeEEecccccceeeeeecCCCCee-eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEE
Confidence 6532 334455566677899999999855 455677889999987432111 11111122334567787765 45443
Q ss_pred Eec-CCCcceeeeEee-Cccceeeeeccccceeeeeeccc---------cCCCcEEEEEECC-CCCEEEEEEcCCCCcee
Q 024436 172 IHS-RRKGISKLVLSF-PWIGNVLIKLPIDIVKIHSSLVK---------LSGNGGMAMRISE-QGNVLEILEEIGRKMWR 239 (268)
Q Consensus 172 ~~~-~~~~~~~~v~~~-~~~g~~l~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~G~~~~~~~~~~g~~~~ 239 (268)
..+ .... |..+ ..+++.+..+.........++.. .... +.+...+. +++.+..+.+..+
T Consensus 295 ~~gs~D~~----I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d-~~I~iwd~~~~~~v~~l~gH~~---- 365 (420)
T 4gga_A 295 GGGTSDRH----IRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ-NQLVIWKYPTMAKVAELKGHTS---- 365 (420)
T ss_dssp EECTTTCE----EEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTT-CCEEEEETTTCCEEEEECCCSS----
T ss_pred EeecCCCE----EEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCC-CEEEEEECCCCcEEEEEcCCCC----
Confidence 332 2211 2222 24555555544332211111110 0011 22333333 4666666665443
Q ss_pred ceEEEEE-eCCEEEEeeCCCCeEEEEeC
Q 024436 240 SISEVEE-KDGNLWIGSVNMPYAGLYNY 266 (268)
Q Consensus 240 ~~s~~~~-~~g~Lyv~s~~~~~v~~~~~ 266 (268)
.++.+.. .+|+.+++...+..|-+-++
T Consensus 366 ~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 366 RVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp CEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred CEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 2344444 45665555555666655443
No 244
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.70 E-value=0.0023 Score=57.30 Aligned_cols=106 Identities=14% Similarity=0.106 Sum_probs=65.3
Q ss_pred CcceEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCeeEEEeecCCcceEEEEeCCCCeEEEeecCCCCcc
Q 024436 35 GPESLAFDA-LGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFPN 113 (268)
Q Consensus 35 ~P~gia~~~-dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~pn 113 (268)
.-.+++++| ++++++++..||.|..|+.+..... .+. .+..+-..-+
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~----------------------~~~----------~~~gH~~~V~ 168 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP----------------------TFI----------KGIGAGGSIT 168 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC----------------------EEE----------CCCSSSCCCC
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce----------------------eEE----------EccCCCCCEE
Confidence 467788888 5667778888888877765432100 000 0111223346
Q ss_pred eEEEcc-CCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC---CCCCCceEEcCCCCEEEEEecCC
Q 024436 114 GVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL---PGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 114 Gia~sp-dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l---~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
+|+|+| |++. +++-+..+.|..|++.+. ....+... ......++++++|+++++....+
T Consensus 169 ~l~f~p~~~~~-l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg 231 (435)
T 4e54_B 169 GLKFNPLNTNQ-FYASSMEGTTRLQDFKGN---ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG 231 (435)
T ss_dssp EEEECSSCTTE-EEEECSSSCEEEEETTSC---EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS
T ss_pred EEEEeCCCCCE-EEEEeCCCEEEEeeccCC---ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC
Confidence 899998 5664 456677899999998753 22333321 12345788999998777665554
No 245
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.68 E-value=0.004 Score=52.02 Aligned_cols=147 Identities=16% Similarity=0.180 Sum_probs=87.2
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE----------cCCCCCeeEEEeecCCcceEEEEeCCCCeEEE
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR----------TSPNRNHISVILSGDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 104 (268)
....+++ +++.++++..++.|..++ .++....+.. ...+..++ ......+.|..+|.. .....
T Consensus 106 ~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l---~~~~~d~~i~i~d~~-~~~~~ 178 (313)
T 3odt_A 106 NVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKF---LTASADKTIKLWQND-KVIKT 178 (313)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEE---EEEETTSCEEEEETT-EEEEE
T ss_pred CEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEE---EEEECCCCEEEEecC-ceEEE
Confidence 4556666 678899999999999998 3332222211 11122222 223456788888854 33333
Q ss_pred eec-CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCCCcceeee
Q 024436 105 LLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLV 183 (268)
Q Consensus 105 ~~~-~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v 183 (268)
+.. .....+.++++|+++ +++....+.|..|++..+. ....+..-.+....++++++|.++.+...+. |
T Consensus 179 ~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~------v 248 (313)
T 3odt_A 179 FSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGD--VLRTYEGHESFVYCIKLLPNGDIVSCGEDRT------V 248 (313)
T ss_dssp ECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSCEEEEETTSE------E
T ss_pred EeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchh--hhhhhhcCCceEEEEEEecCCCEEEEecCCE------E
Confidence 333 445568999999996 4566678899999987432 1222222234567899999997666555443 4
Q ss_pred EeeC-ccceeeeeccc
Q 024436 184 LSFP-WIGNVLIKLPI 198 (268)
Q Consensus 184 ~~~~-~~g~~l~~i~~ 198 (268)
..+. ..++.+..+..
T Consensus 249 ~iwd~~~~~~~~~~~~ 264 (313)
T 3odt_A 249 RIWSKENGSLKQVITL 264 (313)
T ss_dssp EEECTTTCCEEEEEEC
T ss_pred EEEECCCCceeEEEec
Confidence 4443 45555555443
No 246
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.67 E-value=0.0002 Score=68.33 Aligned_cols=133 Identities=13% Similarity=0.009 Sum_probs=81.9
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE-------------EcCCCCCeeEEEeecC------CcceEEEE
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFA-------------RTSPNRNHISVILSGD------KTGRLMKY 95 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~-------------~~~~~~~~~~~~~~~~------~~g~v~~~ 95 (268)
.+..++++|||+++++ ..+|.|..++.++....... ..+|++.++....... ..+.++.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 5788999999997665 56889998886533211111 1234444443221111 13789999
Q ss_pred eCCCCeEEEeecCCC---CcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC-------C----------
Q 024436 96 DPATKQVTVLLGNLS---FPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP-------G---------- 155 (268)
Q Consensus 96 d~~~~~~~~~~~~~~---~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~-------g---------- 155 (268)
|.++++.+.+..... ....++|||||+.|.++.. +.|++++++++. ...+...+ |
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~---~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQ---AIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSC---CEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCCc---eEEEecCCCCCceECcccceeEEEEe
Confidence 998887755543222 2668999999987776653 689999987643 22222211 0
Q ss_pred --CCCceEEcCCCC-EEEEEe
Q 024436 156 --FPDNIKRSPRGG-FWVGIH 173 (268)
Q Consensus 156 --~Pdgia~d~dG~-l~va~~ 173 (268)
...+++++|||+ |+.+..
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEE
T ss_pred ccCcceEEECCCCCEEEEEEE
Confidence 125799999997 444443
No 247
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.019 Score=49.21 Aligned_cols=138 Identities=12% Similarity=0.214 Sum_probs=84.9
Q ss_pred CCcceEEECCC--CCEEEEEeCCCeEEEEeCCCCeEEEEEEc------------CCC--CCeeEEEeecCCcceEEEEeC
Q 024436 34 IGPESLAFDAL--GEGPYTGVSDGRIIKWHQDQRRWLHFART------------SPN--RNHISVILSGDKTGRLMKYDP 97 (268)
Q Consensus 34 ~~P~gia~~~d--G~~l~~~~~~g~I~~~~~~g~~~~~~~~~------------~~~--~~~~~~~~~~~~~g~v~~~d~ 97 (268)
....++++.++ +++++++..||.|..|+.+...+...... .+. +.++ +.....+.|..+|.
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l---~~~~~d~~i~v~d~ 132 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL---LVASSDGKVSVVEF 132 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE---EEEETTSEEEEEEC
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEE---EEecCCCcEEEEec
Confidence 45678999887 99999999999999988754432221111 122 2222 23345677777777
Q ss_pred CCCe---EEEeecCCCCcceEEEcc-------------CCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC---CCCCC
Q 024436 98 ATKQ---VTVLLGNLSFPNGVALSE-------------DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL---PGFPD 158 (268)
Q Consensus 98 ~~~~---~~~~~~~~~~pnGia~sp-------------dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l---~g~Pd 158 (268)
.++. ...+.......+.++|+| |++.| ++.+..+.|..|++..+.. .......+ .+...
T Consensus 133 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~h~~~v~ 210 (379)
T 3jrp_A 133 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDAQ-TYVLESTLEGHSDWVR 210 (379)
T ss_dssp CTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE-EEEETTSCEEEEEEETTTT-EEEEEEEECCCSSCEE
T ss_pred CCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE-EEEeCCCeEEEEEecCCCc-ceeeEEEEecccCcEe
Confidence 6542 223334445568999999 68755 5556778999999874321 11122222 23456
Q ss_pred ceEEcCC---CCEEEEEecCC
Q 024436 159 NIKRSPR---GGFWVGIHSRR 176 (268)
Q Consensus 159 gia~d~d---G~l~va~~~~~ 176 (268)
.++++++ |+++++....+
T Consensus 211 ~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp EEEECCCCSSSEEEEEEETTS
T ss_pred EEEECCCCCCCCeEEEEeCCC
Confidence 8999999 77666665554
No 248
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.61 E-value=0.019 Score=55.21 Aligned_cols=87 Identities=9% Similarity=0.055 Sum_probs=54.5
Q ss_pred ceEEECCCCCEEEEEeCC---------CeEEEEeCCCCeEE---------EEEEcCCCCCeeEEEeecCCcceEEEEeCC
Q 024436 37 ESLAFDALGEGPYTGVSD---------GRIIKWHQDQRRWL---------HFARTSPNRNHISVILSGDKTGRLMKYDPA 98 (268)
Q Consensus 37 ~gia~~~dG~~l~~~~~~---------g~I~~~~~~g~~~~---------~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 98 (268)
++++++|||+.++...++ +.++.++..+.... .....+|++.++. +.. .+.||.++.+
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la-~~~---~~~i~~~~~~ 140 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLA-YVW---NNDIYVKIEP 140 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEE-EEE---TTEEEEESST
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEE-EEE---CCeEEEEECC
Confidence 447899999988776654 56667777654221 1223356665442 222 3679999988
Q ss_pred CCeEEEeecCC-------------------CCcceEEEccCCCEEEEE
Q 024436 99 TKQVTVLLGNL-------------------SFPNGVALSEDGNYILLA 127 (268)
Q Consensus 99 ~~~~~~~~~~~-------------------~~pnGia~spdg~~lyva 127 (268)
+++.+.+.... ....+++|||||++|.++
T Consensus 141 ~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 141 NLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp TSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred CCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 77766553211 222458999999988765
No 249
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.005 Score=53.09 Aligned_cols=132 Identities=10% Similarity=-0.056 Sum_probs=75.8
Q ss_pred ECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEEEcCCCC-CeeEEEeecCCcceEEEEeCC---------CCe-EEEee-c
Q 024436 41 FDALGEGPYTGVSDGRIIKWHQD-QRRWLHFARTSPNR-NHISVILSGDKTGRLMKYDPA---------TKQ-VTVLL-G 107 (268)
Q Consensus 41 ~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~~~~~~~-~~~~~~~~~~~~g~v~~~d~~---------~~~-~~~~~-~ 107 (268)
+.+|+++++++..||.|..|+.. ++....+....-.. .+...++....++.|..++.+ +++ ++... .
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 34578889999999999999864 44333322110000 000003344455666665444 333 22222 2
Q ss_pred CCCCcceEEEcc--CCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CCCCCCceEEcCCCCEEEEEecCC
Q 024436 108 NLSFPNGVALSE--DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 108 ~~~~pnGia~sp--dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
.-...+.++++| ++++ +++-+..+.|..|++..+. ...... .......++++++|+++++....+
T Consensus 124 ~~~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~---~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDS---QYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp CSSCEEEEECCC---CCE-EEEEETTCCEEEEESSSSC---EEEEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred CCCCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCc---EEEEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence 223467899999 9974 4566678999999997532 221121 222467889999999877765554
No 250
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.59 E-value=0.0083 Score=52.65 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=86.6
Q ss_pred CcceEEECC-CCCEEEEEeCCCeEEEEeCC--CCeEEEEEE---------cCCCCCeeEEEeecCCcceEEEEeCCCCeE
Q 024436 35 GPESLAFDA-LGEGPYTGVSDGRIIKWHQD--QRRWLHFAR---------TSPNRNHISVILSGDKTGRLMKYDPATKQV 102 (268)
Q Consensus 35 ~P~gia~~~-dG~~l~~~~~~g~I~~~~~~--g~~~~~~~~---------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 102 (268)
....+++.+ ++++++++..|+.|..|+.. +.....+.. ..|++.++ ..+..++.|..+|..+++.
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l---~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRF---GTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEE---EEECSSSCEEEEETTTTEE
T ss_pred CeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeE---EEEcCCCeEEEEECCCCcE
Confidence 456677866 88999999999999999864 222222211 12333332 2445678888999887765
Q ss_pred EEeecC--------CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC----CCCCCceEEcCCCCEEE
Q 024436 103 TVLLGN--------LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL----PGFPDNIKRSPRGGFWV 170 (268)
Q Consensus 103 ~~~~~~--------~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l----~g~Pdgia~d~dG~l~v 170 (268)
...... ......++|+|+|++|+ +...++.|+.|+...+. ....+..+ .+....+++++||++++
T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~g~~dg~i~vwd~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 360 (380)
T 3iz6_a 284 LQVYNREPDRNDNELPIVTSVAFSISGRLLF-AGYSNGDCYVWDTLLAE--MVLNLGTLQNSHEGRISCLGLSSDGSALC 360 (380)
T ss_dssp EEEECCCCSSSCCSSCSCSEEEECSSSSEEE-EECTTSCEEEEETTTCC--EEEEECCSCSSCCCCCCEEEECSSSSEEE
T ss_pred EEEecccccccccccCceEEEEECCCCCEEE-EEECCCCEEEEECCCCc--eEEEEecccCCCCCceEEEEECCCCCEEE
Confidence 443321 12357899999998654 56678999999986422 11122111 23466789999999777
Q ss_pred EEecCC
Q 024436 171 GIHSRR 176 (268)
Q Consensus 171 a~~~~~ 176 (268)
+....+
T Consensus 361 sgs~D~ 366 (380)
T 3iz6_a 361 TGSWDK 366 (380)
T ss_dssp EECTTS
T ss_pred EeeCCC
Confidence 665444
No 251
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.59 E-value=0.0075 Score=53.36 Aligned_cols=141 Identities=13% Similarity=0.134 Sum_probs=85.2
Q ss_pred EecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCC-CC-eEEEE----------------EEcCCCC-CeeEEEeecCC
Q 024436 28 YQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQD-QR-RWLHF----------------ARTSPNR-NHISVILSGDK 88 (268)
Q Consensus 28 i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~-~~~~~----------------~~~~~~~-~~~~~~~~~~~ 88 (268)
+..+......+++++|+|++++++ .|+.|..|+.. +. .+..+ ....+.. .++ ..+..
T Consensus 172 ~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l---~s~~~ 247 (447)
T 3dw8_B 172 FANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTF---VYSSS 247 (447)
T ss_dssp ECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEE---EEEET
T ss_pred eccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEE---EEEeC
Confidence 333444568899999999999888 79999999877 22 11111 0011222 222 23345
Q ss_pred cceEEEEeCCCCeE-----EEeecCCC------------CcceEEEccCCCEEEEEecCCcEEEEEEccC-CCCCceeEE
Q 024436 89 TGRLMKYDPATKQV-----TVLLGNLS------------FPNGVALSEDGNYILLAETTSCRILRYWLKT-SKAGTIEIV 150 (268)
Q Consensus 89 ~g~v~~~d~~~~~~-----~~~~~~~~------------~pnGia~spdg~~lyva~~~~~~I~~~~~~~-~~~g~~~~~ 150 (268)
++.|..+|..+++. ..+..... ..+.++|+|||++|+.+. . +.|..|++.. +.. ...+
T Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~-~~v~iwd~~~~~~~--~~~~ 323 (447)
T 3dw8_B 248 KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-Y-LSVKVWDLNMENRP--VETY 323 (447)
T ss_dssp TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-S-SEEEEEETTCCSSC--SCCE
T ss_pred CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-C-CeEEEEeCCCCccc--ccee
Confidence 67888888876653 33333322 567999999998776554 4 9999999863 221 1112
Q ss_pred EeCCCC---------------CCceEEcCCCCEEEEEecCC
Q 024436 151 AQLPGF---------------PDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 151 ~~l~g~---------------Pdgia~d~dG~l~va~~~~~ 176 (268)
..-... .-.++++++|+++++....+
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg 364 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN 364 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT
T ss_pred eccccccccccccccccccccceEEEECCCCCEEEEeccCC
Confidence 110000 11289999998776665554
No 252
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.58 E-value=0.033 Score=48.75 Aligned_cols=142 Identities=14% Similarity=0.189 Sum_probs=87.1
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEE---------cCCCCC------------------------
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFAR---------TSPNRN------------------------ 78 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~~---------~~~~~~------------------------ 78 (268)
-..-.+++++|+|++++++..|+.|..|+..... ...+.. ..+++.
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~ 145 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDG 145 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCC
T ss_pred ccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccC
Confidence 4567899999999999999999999999864321 111110 001100
Q ss_pred -------------------ee----EEEeecCCcceEEEEeCCCCeEEEee------cCCCCcceEEEcc-CCCEEEEEe
Q 024436 79 -------------------HI----SVILSGDKTGRLMKYDPATKQVTVLL------GNLSFPNGVALSE-DGNYILLAE 128 (268)
Q Consensus 79 -------------------~~----~~~~~~~~~g~v~~~d~~~~~~~~~~------~~~~~pnGia~sp-dg~~lyva~ 128 (268)
|. ..+..+..++.|..+|..+++..... ........+++++ +++ ++++.
T Consensus 146 ~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~sg 224 (380)
T 3iz6_a 146 NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNAN-MFISG 224 (380)
T ss_dssp SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCC-EEEEE
T ss_pred CccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCC-EEEEE
Confidence 00 01234445677888888776554332 1222345788876 665 66787
Q ss_pred cCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 129 TTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 129 ~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
+..+.|..|++.... .....+..-.+....+++.|+|+++++....+
T Consensus 225 s~D~~v~~wd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 271 (380)
T 3iz6_a 225 SCDTTVRLWDLRITS-RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDG 271 (380)
T ss_dssp ETTSCEEEEETTTTC-CCCEEECCCSSCCCEEEECTTSSEEEEECSSS
T ss_pred ECCCeEEEEECCCCC-cceEEECCcCCCeEEEEEecCCCeEEEEcCCC
Confidence 888999999986321 11222222224567899999999877766554
No 253
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.57 E-value=0.018 Score=50.99 Aligned_cols=139 Identities=12% Similarity=0.108 Sum_probs=93.8
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCC-Ce----EEEE---------EEcCCCCCeeEEEeecCCcceEEEEeCC
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RR----WLHF---------ARTSPNRNHISVILSGDKTGRLMKYDPA 98 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~----~~~~---------~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 98 (268)
.....++.+.|+|+.+++...|+.|..++... +. .... ....+....+.....+..++.|..+|..
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC
Confidence 45678899999999999999999998887532 10 0111 0112222233333344567889999998
Q ss_pred CCeEEEeecCCCCcceEEEccCCCEEEEEec-CCcEEEEEEccCCCCCceeEEEeCC---CCCCceEEcCCCCEEEEEec
Q 024436 99 TKQVTVLLGNLSFPNGVALSEDGNYILLAET-TSCRILRYWLKTSKAGTIEIVAQLP---GFPDNIKRSPRGGFWVGIHS 174 (268)
Q Consensus 99 ~~~~~~~~~~~~~pnGia~spdg~~lyva~~-~~~~I~~~~~~~~~~g~~~~~~~l~---g~Pdgia~d~dG~l~va~~~ 174 (268)
+++.............+.++|+++.++++.. ..+.|..|++... +.+..+. +....++++|||+++++...
T Consensus 310 t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-----~~v~~l~gH~~~V~~l~~spdg~~l~S~s~ 384 (420)
T 4gga_A 310 SGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-----AKVAELKGHTSRVLSLTMSPDGATVASAAA 384 (420)
T ss_dssp TTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-----CEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred ccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC-----cEEEEEcCCCCCEEEEEEcCCCCEEEEEec
Confidence 8887766666667889999999998877653 5689999998742 2223332 23567899999987666554
Q ss_pred CC
Q 024436 175 RR 176 (268)
Q Consensus 175 ~~ 176 (268)
.+
T Consensus 385 D~ 386 (420)
T 4gga_A 385 DE 386 (420)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 254
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.0079 Score=56.45 Aligned_cols=133 Identities=11% Similarity=0.115 Sum_probs=83.8
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE-------------EcCCCCCeeEEEeecCCcceEEEEeCCC
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFA-------------RTSPNRNHISVILSGDKTGRLMKYDPAT 99 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 99 (268)
-....+++++|||+++.+...+|.|..|+.++ .+..+. .-+|++.++. .+...|.|..+|..+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LA---sgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIV---VGNEDGELQFFSIRK 160 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEE---EEETTSEEEEEECCC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEE---EEcCCCEEEEEECCC
Confidence 34688999999999999999999999998443 111111 1234444443 234567888888876
Q ss_pred Ce--------EEEee----cCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCc-eeEEEeCC-CCCCceEEcCC
Q 024436 100 KQ--------VTVLL----GNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGT-IEIVAQLP-GFPDNIKRSPR 165 (268)
Q Consensus 100 ~~--------~~~~~----~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~-~~~~~~l~-g~Pdgia~d~d 165 (268)
++ +..+. ++...-..++|+||| +++.+..+.|+.|+++++...+ ...+.... .....+++.
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-- 235 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-- 235 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--
Confidence 64 24442 223466799999998 4566678999999998654211 12232111 246788887
Q ss_pred CCEEEEEec
Q 024436 166 GGFWVGIHS 174 (268)
Q Consensus 166 G~l~va~~~ 174 (268)
|+..++...
T Consensus 236 g~~LASa~~ 244 (588)
T 2j04_A 236 DYKVVLTCP 244 (588)
T ss_dssp TTEEEEECS
T ss_pred CCEEEEEeC
Confidence 455454443
No 255
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.01 Score=58.66 Aligned_cols=138 Identities=11% Similarity=0.036 Sum_probs=85.9
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE---------EcCCCCCeeEEEeecCCcceEEEEeCCCCeEEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFA---------RTSPNRNHISVILSGDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 104 (268)
....+++++|+|++++++..||.|..|+..+....... ...+ +.++ .....++.|..+|.++++...
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L---~S~s~D~~v~lWd~~~~~~~~ 93 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYL---VVINAKDTVYVLSLYSQKVLT 93 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEE---EEEETTCEEEEEETTTCSEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEE---EEEECcCeEEEEECCCCcEEE
Confidence 36899999999999999999999999987654211110 0012 1222 233456788888887665443
Q ss_pred eecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeE--E----EeC---CCCCCceEEcCCC-CEEEEEec
Q 024436 105 LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEI--V----AQL---PGFPDNIKRSPRG-GFWVGIHS 174 (268)
Q Consensus 105 ~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~--~----~~l---~g~Pdgia~d~dG-~l~va~~~ 174 (268)
....-...+.++|+||+++|+++ +.++.|..|++++........ + ..+ .+....++++|++ +++++...
T Consensus 94 ~~~~~~~V~~v~~sp~g~~l~sg-s~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~ 172 (902)
T 2oaj_A 94 TVFVPGKITSIDTDASLDWMLIG-LQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE 172 (902)
T ss_dssp EEECSSCEEEEECCTTCSEEEEE-ETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS
T ss_pred EEcCCCCEEEEEECCCCCEEEEE-cCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeC
Confidence 33333456789999999977765 467899999997543210000 0 011 2346789999964 44444444
Q ss_pred CC
Q 024436 175 RR 176 (268)
Q Consensus 175 ~~ 176 (268)
.+
T Consensus 173 dg 174 (902)
T 2oaj_A 173 YV 174 (902)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 256
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.52 E-value=0.045 Score=48.77 Aligned_cols=152 Identities=14% Similarity=0.144 Sum_probs=87.6
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCCC-eEEEEEEc-----------CCCCCeeEEEeecCCcceEEEEeCCCC
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR-RWLHFART-----------SPNRNHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~-~~~~~~~~-----------~~~~~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
-.....+++.+++ .++++..||.|..|+.+.. ....+... .++.. .+.....++.|..+|..++
T Consensus 162 ~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~---~l~s~s~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 162 DGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIK---YIVTGSRDNTLHVWKLPKE 237 (464)
T ss_dssp SSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCE---EEEEEETTSCEEEEECCCC
T ss_pred CcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCC---EEEEEcCCCcEEEeeCCCC
Confidence 3468889999988 6889999999999987543 22222100 01111 1223345667777776644
Q ss_pred eEE------------------------EeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCC
Q 024436 101 QVT------------------------VLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGF 156 (268)
Q Consensus 101 ~~~------------------------~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~ 156 (268)
+.. .+... ...-.+++++++.|+ +.+..+.|..|++.... ....+..-.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~l~-~~~~d~~i~vwd~~~~~--~~~~~~~~~~~ 312 (464)
T 3v7d_B 238 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH--MASVRTVSGHGNIVV-SGSYDNTLIVWDVAQMK--CLYILSGHTDR 312 (464)
T ss_dssp CCC------CCSSEEESCGGGCTTEEEEECCC--SSCEEEEEEETTEEE-EEETTSCEEEEETTTTE--EEEEECCCSSC
T ss_pred cccccccccCCcceEeeccCCCeEEEEEccCc--cceEEEEcCCCCEEE-EEeCCCeEEEEECCCCc--EEEEecCCCCC
Confidence 311 11111 122345678888665 44567899999987421 11122111234
Q ss_pred CCceEEcCCCCEEEEEecCCCcceeeeEeeC-ccceeeeeccc
Q 024436 157 PDNIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGNVLIKLPI 198 (268)
Q Consensus 157 Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~-~~g~~l~~i~~ 198 (268)
...++++++|+.+++....+. |..+. ..++.+..+..
T Consensus 313 v~~~~~~~~~~~l~sg~~dg~-----i~vwd~~~~~~~~~~~~ 350 (464)
T 3v7d_B 313 IYSTIYDHERKRCISASMDTT-----IRIWDLENGELMYTLQG 350 (464)
T ss_dssp EEEEEEETTTTEEEEEETTSC-----EEEEETTTTEEEEEECC
T ss_pred EEEEEEcCCCCEEEEEeCCCc-----EEEEECCCCcEEEEEeC
Confidence 567899999987776665543 44443 45666665543
No 257
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.48 E-value=0.011 Score=52.11 Aligned_cols=110 Identities=14% Similarity=0.175 Sum_probs=65.1
Q ss_pred CCcceEEEEeCCCCeEEEeecCCCCcceEEEccCCC-------EEEEEecC--CcEEEEEEccCCCCCceeEEEeC--C-
Q 024436 87 DKTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGN-------YILLAETT--SCRILRYWLKTSKAGTIEIVAQL--P- 154 (268)
Q Consensus 87 ~~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~-------~lyva~~~--~~~I~~~~~~~~~~g~~~~~~~l--~- 154 (268)
.+.+.|+.||.+ |+....... ..+|++.+-|+=+ .+|+++.. +++|..|+++... +....+..+ |
T Consensus 47 ~k~~gL~Vydl~-G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~-~~l~~i~~~~~pv 123 (355)
T 3amr_A 47 NKKSGLVVYSLD-GKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN-GTLQSMTDPDHPI 123 (355)
T ss_dssp ETTTEEEEEETT-SCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT-CCEEECSCTTSCE
T ss_pred cCCCCEEEEcCC-CcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC-CceeeccccccCc
Confidence 345789999997 555444433 5689998888422 57999998 9999999886321 123333221 2
Q ss_pred ----CCCCceEE--cCC-CCEEEEEecCCCcceeeeEeeC----ccceeeeecccc
Q 024436 155 ----GFPDNIKR--SPR-GGFWVGIHSRRKGISKLVLSFP----WIGNVLIKLPID 199 (268)
Q Consensus 155 ----g~Pdgia~--d~d-G~l~va~~~~~~~~~~~v~~~~----~~g~~l~~i~~~ 199 (268)
..|.|+|+ ++. |.+|+-......++.+|-.... ..++++++++.+
T Consensus 124 ~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg 179 (355)
T 3amr_A 124 ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN 179 (355)
T ss_dssp ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS
T ss_pred CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC
Confidence 46999999 875 5544433333334333322222 234455555554
No 258
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.47 E-value=0.031 Score=50.35 Aligned_cols=151 Identities=13% Similarity=0.053 Sum_probs=84.6
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCC---------C---Ce--------------EEEEEEcCCCCCeeEEEe-ecC
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQD---------Q---RR--------------WLHFARTSPNRNHISVIL-SGD 87 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~---------g---~~--------------~~~~~~~~~~~~~~~~~~-~~~ 87 (268)
..+-+++++++.+++++..++ +..++.+ + .. +... ..++++.++.... .+.
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l-~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHL-ALSCDNLTLSACMMSSE 115 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEE-EECTTSCEEEEEEEETT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEE-EEcCCCCEEEEEEeccC
Confidence 456789999999888887666 4332210 0 00 1111 1123333333211 345
Q ss_pred CcceEEEEeCCCC-----e-------EEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC--
Q 024436 88 KTGRLMKYDPATK-----Q-------VTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL-- 153 (268)
Q Consensus 88 ~~g~v~~~d~~~~-----~-------~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l-- 153 (268)
..+.|..||..++ + ...+..+-...+.++|+|++..++++.+..+.|..|++..+ .......
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~----~~~~~~~~~ 191 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET----VKVCATLPS 191 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS----EEEEEEECG
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC----cceeeccCC
Confidence 5677777776432 0 12222233457899999984346677778899999998743 1122111
Q ss_pred CCCCCceEEcCCCCEEEEEecCCCcceeeeEeeCccceeeeec
Q 024436 154 PGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKL 196 (268)
Q Consensus 154 ~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i 196 (268)
......++++++|+.+++....+. |..+...++....+
T Consensus 192 ~~~v~~v~wspdg~~lasgs~dg~-----v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQLAVGKQNGT-----VVQYLPTLQEKKVI 229 (434)
T ss_dssp GGCEEEEEECTTSSCEEEEETTSC-----EEEECTTCCEEEEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCc-----EEEEccCCcccccc
Confidence 235778999999975554444443 55554444444433
No 259
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.44 E-value=0.038 Score=46.06 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=90.7
Q ss_pred CCCcceEEECCCCCEEEEEeCCCeEEEEeCCC-Ce----EEEE---------EEcCCCCCeeEEEeecCCcceEEEEeCC
Q 024436 33 AIGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RR----WLHF---------ARTSPNRNHISVILSGDKTGRLMKYDPA 98 (268)
Q Consensus 33 ~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~----~~~~---------~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 98 (268)
......+++.++|+.++++..++.|..++... +. .... ....+..........+...+.|..+|..
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 45678889999999999999999999887642 10 0000 0111222223333345566778888887
Q ss_pred CCeEEEeecCCCCcceEEEccCCCEEEEEe-cCCcEEEEEEccCCCCCceeEEEeCC---CCCCceEEcCCCCEEEEEec
Q 024436 99 TKQVTVLLGNLSFPNGVALSEDGNYILLAE-TTSCRILRYWLKTSKAGTIEIVAQLP---GFPDNIKRSPRGGFWVGIHS 174 (268)
Q Consensus 99 ~~~~~~~~~~~~~pnGia~spdg~~lyva~-~~~~~I~~~~~~~~~~g~~~~~~~l~---g~Pdgia~d~dG~l~va~~~ 174 (268)
+...............+.++|+++.++++. ...+.|..|++..+. .+..+. +....+++.+||+++++...
T Consensus 230 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~-----~~~~l~gH~~~V~~l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 230 SGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA-----KVAELKGHTSRVLSLTMSPDGATVASAAA 304 (318)
T ss_dssp TCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-----EEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred cccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc-----EEEEEcCCCCCEEEEEEcCCCCEEEEEec
Confidence 666655555556678899999999887764 356899999987432 222332 23567899999987666554
Q ss_pred CC
Q 024436 175 RR 176 (268)
Q Consensus 175 ~~ 176 (268)
.+
T Consensus 305 D~ 306 (318)
T 4ggc_A 305 DE 306 (318)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 260
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.0027 Score=59.64 Aligned_cols=131 Identities=9% Similarity=-0.029 Sum_probs=68.9
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCeeE-EEeecCCcceEEEEeCCCCeEEEeecCCCCc
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNHIS-VILSGDKTGRLMKYDPATKQVTVLLGNLSFP 112 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p 112 (268)
..-++++++|||++++++..|+.|. ++... ..+ .+....+. ..+...+..+.+.++...+....-..+-...
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~--~~l---~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V 88 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYA--KDI---NCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYP 88 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCC--SCC---SSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCE
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--ccccc--cee---cCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcE
Confidence 4688999999999888888888886 32211 101 00000011 1111111112222221111111011223456
Q ss_pred ceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eC---CCCCCceEEcCCCCEEEEEecCC
Q 024436 113 NGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QL---PGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 113 nGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l---~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
..++|||||++|- +-+.++.|..|+.++ ....+. +. ....+.+++.|||++.++....+
T Consensus 89 ~~vawSPdG~~LA-s~s~dg~V~iwd~~~----~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 89 RVCKPSPIDDWMA-VLSNNGNVSVFKDNK----MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp EEEEECSSSSCEE-EEETTSCEEEEETTE----EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred EEEEECCCCCEEE-EEeCCCcEEEEeCCc----eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence 7999999998665 556778899998542 111111 10 01256799999998655555554
No 261
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.42 E-value=0.023 Score=54.17 Aligned_cols=99 Identities=13% Similarity=0.005 Sum_probs=57.7
Q ss_pred CCCCCeeEEEee--cCCcceEEEEeCCCCeEEEeecCCCC--cceEEEccCCCEEEEEecC------------CcEEEEE
Q 024436 74 SPNRNHISVILS--GDKTGRLMKYDPATKQVTVLLGNLSF--PNGVALSEDGNYILLAETT------------SCRILRY 137 (268)
Q Consensus 74 ~~~~~~~~~~~~--~~~~g~v~~~d~~~~~~~~~~~~~~~--pnGia~spdg~~lyva~~~------------~~~I~~~ 137 (268)
+|++.++.-... +.....|+.+|.++++... ...+.. ..+++|+|||+.||++... ..+|+++
T Consensus 129 SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 129 SWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp CTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEE
Confidence 455554432222 2234689999999887531 111111 2689999999988887542 2459999
Q ss_pred EccCCCCCceeEEEeCCC---CCCceEEcCCCC-EEEEEec
Q 024436 138 WLKTSKAGTIEIVAQLPG---FPDNIKRSPRGG-FWVGIHS 174 (268)
Q Consensus 138 ~~~~~~~g~~~~~~~l~g---~Pdgia~d~dG~-l~va~~~ 174 (268)
++.++.... ..+...+. .-.++++++||+ |.++...
T Consensus 208 ~l~t~~~~~-~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 208 TLGTEPSKD-TVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp ETTSCGGGC-EEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred ECCCCchhc-eEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 987543211 22323222 234788999997 4444443
No 262
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.38 E-value=0.051 Score=46.09 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=28.6
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR 66 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~ 66 (268)
....+++++|+|+.++++..+|.|..|+.+...
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 119 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ 119 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC
Confidence 468899999999999999999999999876543
No 263
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.026 Score=49.86 Aligned_cols=107 Identities=11% Similarity=0.088 Sum_probs=70.8
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeC----CCCeEEEEE-------EcCC--CCCe-----------eEEEeecCCc
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQ----DQRRWLHFA-------RTSP--NRNH-----------ISVILSGDKT 89 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~----~g~~~~~~~-------~~~~--~~~~-----------~~~~~~~~~~ 89 (268)
....++++.|+++.++++..|+.|..|+. .++...... ...+ ...+ ...+.....+
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 191 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL 191 (437)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC
Confidence 36889999999999999999999988875 343211110 0111 0000 1112234456
Q ss_pred ceEEEEeCCCCeEEEeec---CCCCcceEEEccCCCEEEEEecCCcEEEEEEccC
Q 024436 90 GRLMKYDPATKQVTVLLG---NLSFPNGVALSEDGNYILLAETTSCRILRYWLKT 141 (268)
Q Consensus 90 g~v~~~d~~~~~~~~~~~---~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~ 141 (268)
+.|..+|..+++...... .....+.++|+|++++|+ +.+..+.|..|++..
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLI-LGTTRGIIDIWDIRF 245 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEE-EEETTSCEEEEETTT
T ss_pred CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEE-EEcCCCeEEEEEcCC
Confidence 889999988776544333 345678999999998665 555678999999874
No 264
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.31 E-value=0.01 Score=50.70 Aligned_cols=142 Identities=13% Similarity=0.115 Sum_probs=81.1
Q ss_pred CCcceEEECCC--CCEEEEEeCCCeEEEEeCCCC-eEEEEEEc------------CCCC--------------CeeEEEe
Q 024436 34 IGPESLAFDAL--GEGPYTGVSDGRIIKWHQDQR-RWLHFART------------SPNR--------------NHISVIL 84 (268)
Q Consensus 34 ~~P~gia~~~d--G~~l~~~~~~g~I~~~~~~g~-~~~~~~~~------------~~~~--------------~~~~~~~ 84 (268)
....+++++|+ |.+++++..|+.|..++..+. .+...... .+.. ++...+.
T Consensus 104 ~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 183 (316)
T 3bg1_A 104 SSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFA 183 (316)
T ss_dssp SCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEE
T ss_pred CceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEE
Confidence 35789999998 888899999999988875432 12111000 1110 0001122
Q ss_pred ecCCcceEEEEeCCCC-e---EEEeecCCCCcceEEEccCC----CEEEEEecCCcEEEEEEccCCCCC--ceeEEEeCC
Q 024436 85 SGDKTGRLMKYDPATK-Q---VTVLLGNLSFPNGVALSEDG----NYILLAETTSCRILRYWLKTSKAG--TIEIVAQLP 154 (268)
Q Consensus 85 ~~~~~g~v~~~d~~~~-~---~~~~~~~~~~pnGia~spdg----~~lyva~~~~~~I~~~~~~~~~~g--~~~~~~~l~ 154 (268)
.+..++.|..+|..++ + ...+..+-..-+.++|+|++ + ++++-+..++|..|+++....+ ....+....
T Consensus 184 sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~-~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 262 (316)
T 3bg1_A 184 SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS-TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFN 262 (316)
T ss_dssp CCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC-EEEEEETTCEEEEEECSSTTCCCCBCCEEEECS
T ss_pred EecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc-eEEEEcCCCeEEEEEccCccccchhhhhhhcCC
Confidence 3334455555554422 2 22233344456899999986 4 5567778899999998752111 112222233
Q ss_pred CCCCceEEcCCCCEEEEEecCC
Q 024436 155 GFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 155 g~Pdgia~d~dG~l~va~~~~~ 176 (268)
+....+++.|+|+++++....+
T Consensus 263 ~~v~~v~~sp~g~~las~~~D~ 284 (316)
T 3bg1_A 263 DVVWHVSWSITANILAVSGGDN 284 (316)
T ss_dssp SCEEEEEECTTTCCEEEEESSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCC
Confidence 4456788999998666554443
No 265
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.31 E-value=0.056 Score=45.04 Aligned_cols=117 Identities=17% Similarity=0.188 Sum_probs=72.3
Q ss_pred CCEEEEecCCC-CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEEcCCCCCee-----EEEeecCCcceEEEE
Q 024436 23 QGVVQYQIEGA-IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFARTSPNRNHI-----SVILSGDKTGRLMKY 95 (268)
Q Consensus 23 ~~~~~i~~~~~-~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~~~~~~~~~~-----~~~~~~~~~g~v~~~ 95 (268)
+.++++...+- ..-.+++++|+|+.++++..|+.|..|+..... ...+... ...... ..+..+...+.+..+
T Consensus 56 ~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h-~~~~~~~~~~~~~l~s~~~~~~~~~~ 134 (318)
T 4ggc_A 56 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH-SARVGSLSWNSYILSSGSRSGHIHHH 134 (318)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEETTEEEEEETTSEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCc-cceEEEeecCCCEEEEEecCCceEee
Confidence 35566665432 335789999999999999999999999876442 2222111 110000 011122344555555
Q ss_pred eCCCC--eEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC
Q 024436 96 DPATK--QVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT 141 (268)
Q Consensus 96 d~~~~--~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~ 141 (268)
+..++ .+..+.........++++++++.| ++....+.|..|++..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 135 DVRVAEHHVATLSGHSQEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAP 181 (318)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEESSC
T ss_pred ecCCCceeEEEEcCccCceEEEEEcCCCCEE-EEEecCcceeEEECCC
Confidence 55433 234445556667889999999855 4556778999999874
No 266
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.28 E-value=0.049 Score=52.45 Aligned_cols=132 Identities=19% Similarity=0.248 Sum_probs=75.6
Q ss_pred cceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCC----CCeeEEEeecC--------CcceEEEEeCCC----
Q 024436 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPN----RNHISVILSGD--------KTGRLMKYDPAT---- 99 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~--------~~g~v~~~d~~~---- 99 (268)
..++..+++|++++ +. ++.+.++++.+..+..+...... .+++..+.++. ..+.|+++|+++
T Consensus 375 v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~ 452 (758)
T 3ott_A 375 IRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQS 452 (758)
T ss_dssp EEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHC
T ss_pred eEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEcccccccc
Confidence 56788899999555 55 46899999876655554321111 12233333321 123566776542
Q ss_pred --CeEE---Ee--ecCC--CCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe--CC--CCCCceEEcCCC
Q 024436 100 --KQVT---VL--LGNL--SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ--LP--GFPDNIKRSPRG 166 (268)
Q Consensus 100 --~~~~---~~--~~~~--~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~--l~--g~Pdgia~d~dG 166 (268)
+... .. ..++ ...+.|..+++|+ ||+.....+.|.+|+.+.. ....+.. +. ..+..+..|.+|
T Consensus 453 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~~---~~~~~~~~~~~~~~~~~~i~~d~~g 528 (758)
T 3ott_A 453 TSGQYIAEQNYSVHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRTR---EVTKLFADELTGEKSPNYLLCDEDG 528 (758)
T ss_dssp CSSEEECSEEECGGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTTT---EEEEECTTTSCGGGCEEEEEECTTS
T ss_pred CCcceecccccccccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCCC---ceEEecCCCcCCCcccceEEECCCC
Confidence 1111 11 1122 1345788898886 9983333466999998642 2233211 21 246678999999
Q ss_pred CEEEEEe
Q 024436 167 GFWVGIH 173 (268)
Q Consensus 167 ~l~va~~ 173 (268)
+||++..
T Consensus 529 ~lWigt~ 535 (758)
T 3ott_A 529 LLWVGFH 535 (758)
T ss_dssp CEEEEET
T ss_pred CEEEEec
Confidence 9999975
No 267
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.28 E-value=0.01 Score=50.03 Aligned_cols=142 Identities=11% Similarity=0.085 Sum_probs=80.3
Q ss_pred CcceEEECCC--CCEEEEEeCCCeEEEEeCCCC-eE--EEEE---------EcCCCCC----------eeEEEeecCCcc
Q 024436 35 GPESLAFDAL--GEGPYTGVSDGRIIKWHQDQR-RW--LHFA---------RTSPNRN----------HISVILSGDKTG 90 (268)
Q Consensus 35 ~P~gia~~~d--G~~l~~~~~~g~I~~~~~~g~-~~--~~~~---------~~~~~~~----------~~~~~~~~~~~g 90 (268)
...+++++|+ |.+++++..|+.|..++.... .. ..+. ...+... ....+..+..++
T Consensus 101 ~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~ 180 (297)
T 2pm7_B 101 SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTS
T ss_pred ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC
Confidence 5678999997 888999999999988875432 11 1111 0112100 000122233345
Q ss_pred eEEEEeCCCCe----E-EEeecCCCCcceEEEccCC--CEEEEEecCCcEEEEEEccCCCCCceeEEEe---CCCCCCce
Q 024436 91 RLMKYDPATKQ----V-TVLLGNLSFPNGVALSEDG--NYILLAETTSCRILRYWLKTSKAGTIEIVAQ---LPGFPDNI 160 (268)
Q Consensus 91 ~v~~~d~~~~~----~-~~~~~~~~~pnGia~spdg--~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~---l~g~Pdgi 160 (268)
.|..+|..+++ . ..+..+-...+.++|+|++ ..++++-+..+.|..|+++............ .++....+
T Consensus 181 ~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~ 260 (297)
T 2pm7_B 181 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRA 260 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEE
T ss_pred cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEE
Confidence 55555443332 2 2333444556899999996 3566777888999999987532111111111 12334567
Q ss_pred EEcCCCCEEEEEecCC
Q 024436 161 KRSPRGGFWVGIHSRR 176 (268)
Q Consensus 161 a~d~dG~l~va~~~~~ 176 (268)
+++++|+++++....+
T Consensus 261 ~~s~~g~~las~~~D~ 276 (297)
T 2pm7_B 261 SWSLSGNVLALSGGDN 276 (297)
T ss_dssp EECSSSCCEEEEETTS
T ss_pred EECCCCCEEEEEcCCC
Confidence 8999998766655544
No 268
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.27 E-value=0.078 Score=46.03 Aligned_cols=205 Identities=14% Similarity=0.157 Sum_probs=103.9
Q ss_pred CCCEEEEEeCCCeEEEEeCC-CCe-EEEEEEcCCC--CCee--EEEeecCCcceEEEEeCCCCeEEEeecCCCC------
Q 024436 44 LGEGPYTGVSDGRIIKWHQD-QRR-WLHFARTSPN--RNHI--SVILSGDKTGRLMKYDPATKQVTVLLGNLSF------ 111 (268)
Q Consensus 44 dG~~l~~~~~~g~I~~~~~~-g~~-~~~~~~~~~~--~~~~--~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~------ 111 (268)
++..+|+...++.|+.++++ |+. |..- ..... .+.. ..++.....+.|+.+|+++|+..-.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~-~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTK-VAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEE-CSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEe-CCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 34457788889999999975 653 3221 11100 0100 0122234568999999988875422211110
Q ss_pred cceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eCCC---C--------CCceEEcCCCCEEEEEecCCCcc
Q 024436 112 PNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPG---F--------PDNIKRSPRGGFWVGIHSRRKGI 179 (268)
Q Consensus 112 pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l~g---~--------Pdgia~d~dG~l~va~~~~~~~~ 179 (268)
....++. ++ .+|+. +..+.|+.++..+++ ..+. ..+. . .....+..+|.+|++...+.
T Consensus 181 ~~~~~~~-~~-~v~~g-~~~g~l~~~d~~tG~----~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~--- 250 (376)
T 3q7m_A 181 ESAPTTA-FG-AAVVG-GDNGRVSAVLMEQGQ----MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN--- 250 (376)
T ss_dssp CCCCEEE-TT-EEEEC-CTTTEEEEEETTTCC----EEEEEECCC-----------CCCCCCEEETTEEEEECTTSC---
T ss_pred CCCcEEE-CC-EEEEE-cCCCEEEEEECCCCc----EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE---
Confidence 1233444 44 68775 456789999986432 1111 1110 0 11111223578888875543
Q ss_pred eeeeEee-Cccceeeeecccccee-ee----eeccccCCCcEEEEEECC-CCCEEEEEEcCCCCceeceEEEEEeCCEEE
Q 024436 180 SKLVLSF-PWIGNVLIKLPIDIVK-IH----SSLVKLSGNGGMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKDGNLW 252 (268)
Q Consensus 180 ~~~v~~~-~~~g~~l~~i~~~~~~-~~----~~~~~~~~~~~~~~~~~~-~G~~~~~~~~~~g~~~~~~s~~~~~~g~Ly 252 (268)
+..+ ..+|+.+.+.+.+... +. .++-. ... +.++.+|+ +|+.+.......+.. .+..+..+++||
T Consensus 251 ---l~~~d~~tG~~~w~~~~~~~~~~~~~~~~l~~~-~~~-g~l~~~d~~tG~~~w~~~~~~~~~---~~~~~~~~~~l~ 322 (376)
T 3q7m_A 251 ---LTALDLRSGQIMWKRELGSVNDFIVDGNRIYLV-DQN-DRVMALTIDGGVTLWTQSDLLHRL---LTSPVLYNGNLV 322 (376)
T ss_dssp ---EEEEETTTCCEEEEECCCCEEEEEEETTEEEEE-ETT-CCEEEEETTTCCEEEEECTTTTSC---CCCCEEETTEEE
T ss_pred ---EEEEECCCCcEEeeccCCCCCCceEECCEEEEE-cCC-CeEEEEECCCCcEEEeecccCCCc---ccCCEEECCEEE
Confidence 3333 4578877665543211 00 01100 111 34666776 477766654322222 223345689999
Q ss_pred EeeCCCCeEEEEeCCC
Q 024436 253 IGSVNMPYAGLYNYSS 268 (268)
Q Consensus 253 v~s~~~~~v~~~~~~~ 268 (268)
+++. +..|..++.++
T Consensus 323 v~~~-~g~l~~~d~~t 337 (376)
T 3q7m_A 323 VGDS-EGYLHWINVED 337 (376)
T ss_dssp EECT-TSEEEEEETTT
T ss_pred EEeC-CCeEEEEECCC
Confidence 9986 35677777653
No 269
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.27 E-value=0.0013 Score=60.37 Aligned_cols=71 Identities=15% Similarity=0.149 Sum_probs=51.4
Q ss_pred eEEEeecCCCCcceEEEccCCC-EEEEEecCCcEEEEEEccCCCCCceeEEEeC------------CCCCCceEEcCC--
Q 024436 101 QVTVLLGNLSFPNGVALSEDGN-YILLAETTSCRILRYWLKTSKAGTIEIVAQL------------PGFPDNIKRSPR-- 165 (268)
Q Consensus 101 ~~~~~~~~~~~pnGia~spdg~-~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l------------~g~Pdgia~d~d-- 165 (268)
+++++++++..|-+|++.|||+ +|||++. .++|++++.++... ...+.++ .+.+-||+++|+
T Consensus 5 ~v~~va~gL~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~--~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~ 81 (463)
T 2wg3_C 5 CIQEVVSGLRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIF--KEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYK 81 (463)
T ss_dssp EEEEEEEEESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBC--SSCSEECTTTBCCCCSSSCCCSEEEEEECTTHH
T ss_pred EEEEeccCCCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCee--eeeecCCcceeccCccccCCCcceeeEeCCCCc
Confidence 5677888999999999999995 6999997 48999997665321 1112221 134668999986
Q ss_pred --CCEEEEEec
Q 024436 166 --GGFWVGIHS 174 (268)
Q Consensus 166 --G~l~va~~~ 174 (268)
|.||++...
T Consensus 82 ~n~~lYv~yt~ 92 (463)
T 2wg3_C 82 KNGKLYVSYTT 92 (463)
T ss_dssp HHCEEEEEEEE
T ss_pred CCCEEEEEEeC
Confidence 889998753
No 270
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.27 E-value=0.055 Score=51.63 Aligned_cols=160 Identities=11% Similarity=0.102 Sum_probs=89.6
Q ss_pred cceEEECCCCCEEEEEeCCC----------------eEEEEeCCCCe---EEEE-----------EEcCCCCCeeEEEee
Q 024436 36 PESLAFDALGEGPYTGVSDG----------------RIIKWHQDQRR---WLHF-----------ARTSPNRNHISVILS 85 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~~g----------------~I~~~~~~g~~---~~~~-----------~~~~~~~~~~~~~~~ 85 (268)
..+++++|||+.++....++ +|++++.++.. ...+ ...++++.++.....
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 46799999999777655443 38888765421 1111 122455555443322
Q ss_pred cCC--cceEEEEeCCC------C--eEEEeecCCCCcceEEEccCCCEEEEEecC---CcEEEEEEccCCCCCceeEEEe
Q 024436 86 GDK--TGRLMKYDPAT------K--QVTVLLGNLSFPNGVALSEDGNYILLAETT---SCRILRYWLKTSKAGTIEIVAQ 152 (268)
Q Consensus 86 ~~~--~g~v~~~d~~~------~--~~~~~~~~~~~pnGia~spdg~~lyva~~~---~~~I~~~~~~~~~~g~~~~~~~ 152 (268)
... ...|+.+|.++ + +.+.+...... ..-.++|||+.||+.... +.+|++++++++.....+.+..
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccC
Confidence 121 56899999875 4 45556544332 233689999999887543 3489999987542112233322
Q ss_pred -CC-CCCCceEEcCCCCEEEEEecCCCcceeeeEeeCc-cceeeeecccc
Q 024436 153 -LP-GFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFPW-IGNVLIKLPID 199 (268)
Q Consensus 153 -l~-g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~~-~g~~l~~i~~~ 199 (268)
.+ ....++++.+++.++++....... -|..+.. +|+.+..++.+
T Consensus 332 ~~~~~~~~~~~~~~~~~lv~~~~~~g~~---~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 332 EHEKDVLEWVACVRSNFLVLCYLHDVKN---TLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp CCSSCEEEEEEEETTTEEEEEEEETTEE---EEEEEETTTCCEEEEECCC
T ss_pred CCCCCeEEEEEEEcCCEEEEEEEECCEE---EEEEEECCCCCEEEecCCC
Confidence 11 124467777666776665544321 1333433 56666666554
No 271
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.26 E-value=0.058 Score=47.46 Aligned_cols=121 Identities=12% Similarity=0.021 Sum_probs=65.4
Q ss_pred CcceEEECCC----CCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCeeEEEee-cCCcceEEEEeCCCCeE-EEeecC
Q 024436 35 GPESLAFDAL----GEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNHISVILS-GDKTGRLMKYDPATKQV-TVLLGN 108 (268)
Q Consensus 35 ~P~gia~~~d----G~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~g~v~~~d~~~~~~-~~~~~~ 108 (268)
.-+.++++|| +..++.+.++.+|+.+ ++|+.+... .. ..+.-+++-+.++ |+. ..+...
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l-~~g~lv~ss-------------~~g~d~~V~~~~~s~d-G~~~~s~~~~ 177 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGL-TKRRLVSSS-------------GTLSDQQVEVMTFAED-GGGKENQFLM 177 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEE-TTTEEEEEE-------------SSSTTCEEEEEEECTT-SCEEEEEEEC
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEec-CCCcEEEec-------------ccCCCCcEEEEEECCC-CceeeeeccC
Confidence 3567788888 7777765555555544 233321110 01 1233345556555 443 333333
Q ss_pred CCCcceEEEcc---CCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCc---eEEcCCCCEEEEEe
Q 024436 109 LSFPNGVALSE---DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDN---IKRSPRGGFWVGIH 173 (268)
Q Consensus 109 ~~~pnGia~sp---dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdg---ia~d~dG~l~va~~ 173 (268)
-..-+-++|+| |+. ++++.+..+.|..|+++.++. ...+..-...... +++.|+|.++++..
T Consensus 178 ~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~--l~tL~g~~~~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 178 PPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQL--LKKMHIDDSYQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp CCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCE--EEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred CCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcE--EEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence 34456789999 666 778888999999999985331 2333211111223 47889998776543
No 272
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.26 E-value=0.031 Score=47.52 Aligned_cols=110 Identities=14% Similarity=0.036 Sum_probs=67.8
Q ss_pred EecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe---EEEEEEc---------CC--CCCeeEEEeecCCcceEE
Q 024436 28 YQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR---WLHFART---------SP--NRNHISVILSGDKTGRLM 93 (268)
Q Consensus 28 i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~---~~~~~~~---------~~--~~~~~~~~~~~~~~g~v~ 93 (268)
+..+.-..-..++++|+|++++++..|+.|..|+..... ...+... .+ ++.++ .....++.|.
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l---~s~s~D~~v~ 84 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNIL---ASCSYDRKVI 84 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCE---EEEETTSCEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEE---EEEECCCEEE
Confidence 333433456889999999999999999999988864321 1111110 11 01111 2334567788
Q ss_pred EEeCCCCe---EEEeecCCCCcceEEEccC--CCEEEEEecCCcEEEEEEccC
Q 024436 94 KYDPATKQ---VTVLLGNLSFPNGVALSED--GNYILLAETTSCRILRYWLKT 141 (268)
Q Consensus 94 ~~d~~~~~---~~~~~~~~~~pnGia~spd--g~~lyva~~~~~~I~~~~~~~ 141 (268)
.+|..+++ ...+...-...+.++|+|+ |+ ++++.+..+.|..|++..
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTG 136 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECS
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCC
Confidence 88887653 2233344456789999998 65 556777788999999874
No 273
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.082 Score=45.17 Aligned_cols=146 Identities=14% Similarity=0.126 Sum_probs=81.2
Q ss_pred CCEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe--EEEEEEc------------CCCCCeeEEEeecCC
Q 024436 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR--WLHFART------------SPNRNHISVILSGDK 88 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~--~~~~~~~------------~~~~~~~~~~~~~~~ 88 (268)
+.+.++.-. -..-.+++++++ +++++..|+.|..++..... ....... .|++.++ .....
T Consensus 5 ~~~~~~~~h-~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l---as~s~ 78 (330)
T 2hes_X 5 NLIKSLKLY-KEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLL---AAGSF 78 (330)
T ss_dssp EEEEEEECC-SSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEE---EEEET
T ss_pred ccceeeccC-CCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEE---EEEeC
Confidence 345555533 235677888877 78889999999988875421 1111101 1222222 12234
Q ss_pred cceEEEEeCCC-------CeE-EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC---CCC
Q 024436 89 TGRLMKYDPAT-------KQV-TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP---GFP 157 (268)
Q Consensus 89 ~g~v~~~d~~~-------~~~-~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~---g~P 157 (268)
++.|..+|..+ .+. ..+...-..-+.++|+|||++| ++-+..+.|..|++.... ...+....+. ...
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l-as~s~D~~v~iwd~~~~~-~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYL-ATCSRDKSVWIWETDESG-EEYECISVLQEHSQDV 156 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEE-EEEETTSCEEEEECCTTC-CCCEEEEEECCCSSCE
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEE-EEEeCCCEEEEEeccCCC-CCeEEEEEeccCCCce
Confidence 55666666532 122 2233344456789999999855 566678899999984211 0112222222 335
Q ss_pred CceEEcCCCCEEEEEecCC
Q 024436 158 DNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 158 dgia~d~dG~l~va~~~~~ 176 (268)
..+++.|+|+++++....+
T Consensus 157 ~~v~~~p~~~~l~s~s~D~ 175 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDD 175 (330)
T ss_dssp EEEEECSSSSEEEEEETTS
T ss_pred EEEEECCCCCEEEEEcCCC
Confidence 6789999998777665554
No 274
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.20 E-value=0.0057 Score=58.23 Aligned_cols=101 Identities=13% Similarity=0.013 Sum_probs=66.8
Q ss_pred cceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE-------------EcCCCCCeeEEEeec------CCcceEEEEe
Q 024436 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFA-------------RTSPNRNHISVILSG------DKTGRLMKYD 96 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~-------------~~~~~~~~~~~~~~~------~~~g~v~~~d 96 (268)
+.+++++|||+++++ ..++.|+.++.++.....+. ..+|++.++.-.... ...+.|+.+|
T Consensus 18 ~~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 18 TFFPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCCCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 457899999975554 46899999997654322221 124555544322111 1247899999
Q ss_pred CCCCeE---EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCC
Q 024436 97 PATKQV---TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 142 (268)
Q Consensus 97 ~~~~~~---~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~ 142 (268)
.++++. +.+. ...+.++|||||+.|.++. .+.|++++++++
T Consensus 97 ~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g 140 (719)
T 1z68_A 97 LSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGD 140 (719)
T ss_dssp TTTTEECCSSCCC---SSBCCEEECSSTTCEEEEE--TTEEEEESSTTS
T ss_pred CCCCccccceecC---cccccceECCCCCEEEEEE--CCeEEEEeCCCC
Confidence 988876 4432 3467899999999887764 479999998753
No 275
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.19 E-value=0.0053 Score=57.86 Aligned_cols=68 Identities=16% Similarity=0.305 Sum_probs=46.7
Q ss_pred CCCCcceEEEccCCCEEEEEecC---------------------CcEEEEEEccCCCCC----ceeEEEe--CC------
Q 024436 108 NLSFPNGVALSEDGNYILLAETT---------------------SCRILRYWLKTSKAG----TIEIVAQ--LP------ 154 (268)
Q Consensus 108 ~~~~pnGia~spdg~~lyva~~~---------------------~~~I~~~~~~~~~~g----~~~~~~~--l~------ 154 (268)
.+..|.||.++|....+|++-+. .+.|++|..++.... ..+.+.. -|
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 35678999999854569998764 257999988643211 1122211 00
Q ss_pred --------------CCCCceEEcCCCCEEEEEecC
Q 024436 155 --------------GFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 155 --------------g~Pdgia~d~dG~l~va~~~~ 175 (268)
..||||++|++|+||++.-.+
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~ 496 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGD 496 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCC
T ss_pred ccccccccCCCCCccCCcceEECCCCCEEEEecCC
Confidence 259999999999999998764
No 276
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.18 E-value=0.093 Score=49.95 Aligned_cols=157 Identities=8% Similarity=0.009 Sum_probs=87.3
Q ss_pred ceEEECCCCCEEEEEeCCC-------------eEEEEeCCCCe---EEEE-----------EEcCCCCCeeEEEeecC-C
Q 024436 37 ESLAFDALGEGPYTGVSDG-------------RIIKWHQDQRR---WLHF-----------ARTSPNRNHISVILSGD-K 88 (268)
Q Consensus 37 ~gia~~~dG~~l~~~~~~g-------------~I~~~~~~g~~---~~~~-----------~~~~~~~~~~~~~~~~~-~ 88 (268)
.+++++|||+.++....+. +|++++.++.. ...+ ...++++.++....... .
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 6789999999777665443 38888765321 1111 12245555544332223 4
Q ss_pred cceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEec---CCcEEEEEEccCCCCCceeEEEe-CC-CCCCceEEc
Q 024436 89 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAET---TSCRILRYWLKTSKAGTIEIVAQ-LP-GFPDNIKRS 163 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~---~~~~I~~~~~~~~~~g~~~~~~~-l~-g~Pdgia~d 163 (268)
+..||.++..+++.+.+...........+ +||+ +|+... .+.+|++++++++.......+.. -+ ....+++++
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE
Confidence 56899998766777777655444455555 7887 777543 35799999987532211233221 11 123456776
Q ss_pred CCCCEEEEEecCCCcceeeeEeeCccceeeeecccc
Q 024436 164 PRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPID 199 (268)
Q Consensus 164 ~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~ 199 (268)
++.++++....... + |..+...|+.+..++.+
T Consensus 329 -~~~lv~~~~~dg~~--~-l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 329 -GGHLSLEYLKDATS--E-VRVATLKGKPVRTVQLP 360 (695)
T ss_dssp -TTEEEEEEEETTEE--E-EEEEETTCCEEEECCCS
T ss_pred -CCEEEEEEEECCEE--E-EEEEeCCCCeeEEecCC
Confidence 56676665544321 1 33344446555555543
No 277
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.16 E-value=0.067 Score=51.38 Aligned_cols=98 Identities=11% Similarity=0.014 Sum_probs=56.1
Q ss_pred CCCCCeeEEEeecCC--cceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecC-------------CcEEEEEE
Q 024436 74 SPNRNHISVILSGDK--TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETT-------------SCRILRYW 138 (268)
Q Consensus 74 ~~~~~~~~~~~~~~~--~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~-------------~~~I~~~~ 138 (268)
+|++.++.-.....+ ...|+.+|.++|+.......-....+++|+|| +.||++... ..+|++++
T Consensus 171 SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~ 249 (741)
T 1yr2_A 171 SDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHR 249 (741)
T ss_dssp CTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEE
T ss_pred CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEE
Confidence 566555432222222 25799999998876543111111257999999 888887643 23699999
Q ss_pred ccCCCCCceeEEEeCCCC---CCceEEcCCCC-EEEEEe
Q 024436 139 LKTSKAGTIEIVAQLPGF---PDNIKRSPRGG-FWVGIH 173 (268)
Q Consensus 139 ~~~~~~g~~~~~~~l~g~---Pdgia~d~dG~-l~va~~ 173 (268)
+.++.... ..+...+.. -.++.+++||+ |.+...
T Consensus 250 lgt~~~~~-~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 250 LGTPQSAD-QPVFATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp TTSCGGGC-EEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred CCCCchhC-EEEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 86432211 223332222 34788999997 444443
No 278
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.15 E-value=0.11 Score=48.64 Aligned_cols=42 Identities=19% Similarity=0.138 Sum_probs=26.2
Q ss_pred EEEEEECC-CCCEEEEEEcCCCCceeceEEEEEeCCEEEEeeCCC
Q 024436 215 GMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNM 258 (268)
Q Consensus 215 ~~~~~~~~-~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~~~ 258 (268)
+.++++|. +|+++..+..+.+ .... ..+...+|++|++...+
T Consensus 485 g~l~a~D~~tG~~lw~~~~~~~-~~~~-p~~~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 485 GYLKALDNKDGKELWNFKMPSG-GIGS-PMTYSFKGKQYIGSMYG 527 (571)
T ss_dssp SEEEEEETTTCCEEEEEECSSC-CCSC-CEEEEETTEEEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEeCCCC-cEee-eEEEEECCEEEEEEECC
Confidence 56778886 5888888876543 2222 22234788999876533
No 279
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.12 E-value=0.026 Score=47.31 Aligned_cols=105 Identities=12% Similarity=0.126 Sum_probs=64.4
Q ss_pred CCcceEEECCC--CCEEEEEeCCCeEEEEeCCC-Ce---EEE--EEEc-----------------CCC---CCeeEEEee
Q 024436 34 IGPESLAFDAL--GEGPYTGVSDGRIIKWHQDQ-RR---WLH--FART-----------------SPN---RNHISVILS 85 (268)
Q Consensus 34 ~~P~gia~~~d--G~~l~~~~~~g~I~~~~~~g-~~---~~~--~~~~-----------------~~~---~~~~~~~~~ 85 (268)
....+++++|+ +++++++..++.|..|+... +. +.. -... .+. ..+ +..
T Consensus 111 ~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---l~~ 187 (351)
T 3f3f_A 111 GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEK---LAV 187 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCE---EEE
T ss_pred CceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcE---EEE
Confidence 46789999999 99999999999999998643 21 110 0000 011 111 112
Q ss_pred cCCcceEEEEeCCCCeEEE---eecCCCCcceEEEccCCC---EEEEEecCCcEEEEEEccC
Q 024436 86 GDKTGRLMKYDPATKQVTV---LLGNLSFPNGVALSEDGN---YILLAETTSCRILRYWLKT 141 (268)
Q Consensus 86 ~~~~g~v~~~d~~~~~~~~---~~~~~~~pnGia~spdg~---~lyva~~~~~~I~~~~~~~ 141 (268)
....+.+..++..+++... +...-...+.++|+|++. .++++....+.|..|++..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 188 SALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred ecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 2344555555555455432 223334567999999982 3556667788999999874
No 280
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.11 E-value=0.2 Score=47.85 Aligned_cols=65 Identities=26% Similarity=0.492 Sum_probs=41.7
Q ss_pred ceEEECCCCCEEEEEeCCC-------------------eEEEEeCC-CCe-EEEEEEcCCC---------CCee------
Q 024436 37 ESLAFDALGEGPYTGVSDG-------------------RIIKWHQD-QRR-WLHFARTSPN---------RNHI------ 80 (268)
Q Consensus 37 ~gia~~~dG~~l~~~~~~g-------------------~I~~~~~~-g~~-~~~~~~~~~~---------~~~~------ 80 (268)
..++++++++++|+...++ .|+.++++ |+. |. +. ..+. .+.+
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~-~~-~~~~d~wd~~~~~~p~l~~~~~d 323 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWH-YQ-ETPGDNWDYTSTQPMILADIKIA 323 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEE-EE-SSTTCCSCCCCCSCCEEEEEEET
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEE-Ee-cCCCcccccccCCCcEEEecccC
Confidence 4678999999999887654 48888875 542 32 11 1111 1111
Q ss_pred ----EEEeecCCcceEEEEeCCCCeEE
Q 024436 81 ----SVILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 81 ----~~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
..++....+|.++.+|.++|++.
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 22345567899999999998764
No 281
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.043 Score=54.24 Aligned_cols=136 Identities=13% Similarity=0.058 Sum_probs=86.3
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEE--------EcCCCCCeeEEEeecCCcceEEEEeCCCCeEEE
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFA--------RTSPNRNHISVILSGDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~--------~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 104 (268)
..-..++|.| |+++++...|+.|..|+.+. +....+. ...++..++. .+..+|.|..+|.++++...
T Consensus 59 ~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~---sgs~dg~V~lwd~~~~~~~~ 134 (902)
T 2oaj_A 59 SAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWML---IGLQNGSMIVYDIDRDQLSS 134 (902)
T ss_dssp CCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEE---EEETTSCEEEEETTTTEEEE
T ss_pred CCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEE---EEcCCCcEEEEECCCCcccc
Confidence 3568899999 88888888999999999754 3322221 1123334332 33457888899988776532
Q ss_pred e------------ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC--C----------------
Q 024436 105 L------------LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL--P---------------- 154 (268)
Q Consensus 105 ~------------~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l--~---------------- 154 (268)
. .......+.++|+|++..++++....+.| .|++..+.. ...+..- +
T Consensus 135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce--EEEEecccCCcCCCcccccccccccC
Confidence 1 11234567899999754455566777889 999875321 1122110 0
Q ss_pred CCCCceEEcCCCCEEEEEecCC
Q 024436 155 GFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 155 g~Pdgia~d~dG~l~va~~~~~ 176 (268)
+....+++.++|+++++....+
T Consensus 212 ~~V~~v~fspdg~~lasgs~Dg 233 (902)
T 2oaj_A 212 PKVIQSLYHPNSLHIITIHEDN 233 (902)
T ss_dssp CCEEEEEECTTSSEEEEEETTC
T ss_pred CCeEEEEEcCCCCEEEEEECCC
Confidence 2245789999999877776655
No 282
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.10 E-value=0.038 Score=47.74 Aligned_cols=133 Identities=9% Similarity=0.004 Sum_probs=75.6
Q ss_pred CcceEEECC-CCCEE-EEEeCC-----CeEEEEeCCCCeEEEE-----------EEcCCCCCeeEEEeecCCc--ceEEE
Q 024436 35 GPESLAFDA-LGEGP-YTGVSD-----GRIIKWHQDQRRWLHF-----------ARTSPNRNHISVILSGDKT--GRLMK 94 (268)
Q Consensus 35 ~P~gia~~~-dG~~l-~~~~~~-----g~I~~~~~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~--g~v~~ 94 (268)
....++++| ||+.+ ++.... .+|+.++.++..+..+ ...++++.++.-....... +.|+.
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEE
Confidence 356788999 77744 444322 4788888765421111 1224444443222122222 45999
Q ss_pred EeCCCCeEEEeecCCCCcceEEEcc-CCCEEEEEec---------------CCcEEEEEEccCCCCCceeEEEeCCC---
Q 024436 95 YDPATKQVTVLLGNLSFPNGVALSE-DGNYILLAET---------------TSCRILRYWLKTSKAGTIEIVAQLPG--- 155 (268)
Q Consensus 95 ~d~~~~~~~~~~~~~~~pnGia~sp-dg~~lyva~~---------------~~~~I~~~~~~~~~~g~~~~~~~l~g--- 155 (268)
+|.++++.+.+... ...+ ++|+| ||+.++++.. ....|++++++++.. ..+...+.
T Consensus 269 ~d~~~g~~~~l~~~-~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~ 343 (396)
T 3c5m_A 269 ANPETLENEEVMVM-PPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA---QKLCKHSTSWD 343 (396)
T ss_dssp ECTTTCCEEEEEEC-CSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC---CEEEECCCCCC
T ss_pred EECCCCCeEEeeeC-CCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce---EEccCCCCccc
Confidence 99988877665432 1223 89999 9996665432 346899999876432 23332221
Q ss_pred --------CCCceEEcCCCC-EEEEE
Q 024436 156 --------FPDNIKRSPRGG-FWVGI 172 (268)
Q Consensus 156 --------~Pdgia~d~dG~-l~va~ 172 (268)
.+..+++++||+ |+.+.
T Consensus 344 ~~~~~~~~~~~~~~~s~dg~~l~~~s 369 (396)
T 3c5m_A 344 VLDGDRQITHPHPSFTPNDDGVLFTS 369 (396)
T ss_dssp CBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred cccccccCCCCCceEccCCCeEEEEe
Confidence 145578899997 44443
No 283
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.05 E-value=0.041 Score=47.75 Aligned_cols=142 Identities=9% Similarity=0.012 Sum_probs=83.0
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCC--eE---EE---EEEcCCCCCeeEEEeecCCcceEEEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQR--RW---LH---FARTSPNRNHISVILSGDKTGRLMKY 95 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~--~~---~~---~~~~~~~~~~~~~~~~~~~~g~v~~~ 95 (268)
.+..+..+. ...++++++++ +++. .+++|..++.... .+ .. ....++ .+ ..+..+...|.|..+
T Consensus 93 ~~~~~~~~~--~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~-la~~sg~~~g~v~iw 164 (355)
T 3vu4_A 93 DVSRIKVDA--PVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GL-LVYSNEFNLGQIHIT 164 (355)
T ss_dssp EEEEEECSS--CEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TE-EEEEESSCTTCEEEE
T ss_pred EEEEEECCC--ceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEc--cE-EEEeCCCcCcEEEEE
Confidence 455555443 56777777765 3332 3677777775432 11 10 000111 11 112125677888888
Q ss_pred eCCCCe-----------------EEEeecCCCCcceEEEccCCCEEEEEecCCcE-EEEEEccCCCCCceeEEEe--CCC
Q 024436 96 DPATKQ-----------------VTVLLGNLSFPNGVALSEDGNYILLAETTSCR-ILRYWLKTSKAGTIEIVAQ--LPG 155 (268)
Q Consensus 96 d~~~~~-----------------~~~~~~~~~~pnGia~spdg~~lyva~~~~~~-I~~~~~~~~~~g~~~~~~~--l~g 155 (268)
|..+++ +..+..+-...+.++|+|||++| ++.+..+. |..|++..+. ....+.. -.+
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l-~s~s~d~~~v~iwd~~~~~--~~~~~~~g~h~~ 241 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV-ATCSQDGTIIRVFKTEDGV--LVREFRRGLDRA 241 (355)
T ss_dssp ECCC------------------CCEEECCCSSCEEEEEECTTSSEE-EEEETTCSEEEEEETTTCC--EEEEEECTTCCS
T ss_pred ECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEE-EEEeCCCCEEEEEECCCCc--EEEEEEcCCCCC
Confidence 887654 44455555567899999999855 56667787 9999987432 1233331 223
Q ss_pred CCCceEEcCCCCEEEEEecCC
Q 024436 156 FPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 156 ~Pdgia~d~dG~l~va~~~~~ 176 (268)
....++++++|+++++....+
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTC
T ss_pred cEEEEEECCCCCEEEEEECCC
Confidence 456789999999777666554
No 284
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.04 E-value=0.041 Score=53.05 Aligned_cols=138 Identities=12% Similarity=0.214 Sum_probs=85.6
Q ss_pred CCcceEEECCC--CCEEEEEeCCCeEEEEeCCCCeEEEEEEc------------CCC--CCeeEEEeecCCcceEEEEeC
Q 024436 34 IGPESLAFDAL--GEGPYTGVSDGRIIKWHQDQRRWLHFART------------SPN--RNHISVILSGDKTGRLMKYDP 97 (268)
Q Consensus 34 ~~P~gia~~~d--G~~l~~~~~~g~I~~~~~~g~~~~~~~~~------------~~~--~~~~~~~~~~~~~g~v~~~d~ 97 (268)
....+++++++ |+.++++..||.|..|+.++..+...... .+. +.++ ..+..+|.|..+|.
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l---~sgs~dg~I~vwdl 130 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL---LVASSDGKVSVVEF 130 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE---EEEETTSEEEEEEC
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEE---EEEeCCCcEEEEEe
Confidence 45678999988 99999999999999998755432221111 122 2222 23345677888887
Q ss_pred CCCe---EEEeecCCCCcceEEEcc-------------CCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC---CCCCC
Q 024436 98 ATKQ---VTVLLGNLSFPNGVALSE-------------DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL---PGFPD 158 (268)
Q Consensus 98 ~~~~---~~~~~~~~~~pnGia~sp-------------dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l---~g~Pd 158 (268)
.++. ...+.......+.++++| |++.| ++.+..+.|..|++..+.. .......+ .+...
T Consensus 131 ~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l-~sgs~dg~I~iwd~~~~~~-~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDAQ-TYVLESTLEGHSDWVR 208 (753)
T ss_dssp CSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCE-EEEETTSCEEEEEEETTTT-EEEEEEEECCCSSCEE
T ss_pred ecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEE-EEEECCCeEEEEeccCCcc-cceeeeeecCCCCcEE
Confidence 6542 223334445567899999 57655 5556778999999875321 11222222 23467
Q ss_pred ceEEcCC---CCEEEEEecCC
Q 024436 159 NIKRSPR---GGFWVGIHSRR 176 (268)
Q Consensus 159 gia~d~d---G~l~va~~~~~ 176 (268)
.+++.|+ |+++++....+
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSS
T ss_pred EEEeccCCCCCCEEEEEecCC
Confidence 8899999 77766665554
No 285
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.92 E-value=0.17 Score=43.71 Aligned_cols=100 Identities=9% Similarity=-0.030 Sum_probs=52.1
Q ss_pred CCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEc--------CCCCCeeEEEeecCCcceEEEEeCCCCeEEEe
Q 024436 34 IGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFART--------SPNRNHISVILSGDKTGRLMKYDPATKQVTVL 105 (268)
Q Consensus 34 ~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 105 (268)
..-.+++|+|||++++++..++ +..++.+.......... ....+++. +.+...+.|..+|..+++....
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVA--FVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEE--EECSSTTEEEEEETTTTEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEE--EEECCccEEEEEECCCCcEEEE
Confidence 4678999999999888877664 44555432211111111 11112221 2334456888888877765443
Q ss_pred ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEcc
Q 024436 106 LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK 140 (268)
Q Consensus 106 ~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~ 140 (268)
.........+++++++ ++++. .++|+.|++.
T Consensus 97 ~~~~~~v~~v~~~~~~--~~~~~--~~~i~i~d~~ 127 (355)
T 3vu4_A 97 IKVDAPVKDLFLSREF--IVVSY--GDVISVFKFG 127 (355)
T ss_dssp EECSSCEEEEEECSSE--EEEEE--TTEEEEEESS
T ss_pred EECCCceEEEEEcCCE--EEEEE--cCEEEEEECC
Confidence 3333334566666553 33332 2345555543
No 286
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.072 Score=49.33 Aligned_cols=135 Identities=9% Similarity=-0.025 Sum_probs=81.3
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCC-CCe-EEEE----------E-EcCCCC-CeeEEEeecCCcceEEEEeCCCC
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQD-QRR-WLHF----------A-RTSPNR-NHISVILSGDKTGRLMKYDPATK 100 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~-g~~-~~~~----------~-~~~~~~-~~~~~~~~~~~~g~v~~~d~~~~ 100 (268)
...++++++++ .++++..||.|..|+.. +.. ...+ + ..++++ .++ .+...++.|..+|..++
T Consensus 268 ~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~l---aS~S~D~tvklWD~~~~ 343 (524)
T 2j04_B 268 LITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVV---STVAVDGYFYIFNPKDI 343 (524)
T ss_dssp CEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEE---EEEETTSEEEEECGGGH
T ss_pred CEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEE---EEeccCCeEEEEECCCC
Confidence 46688998875 68999999999999875 321 1111 1 112222 222 23345567777777644
Q ss_pred eEE-EeecCC--CCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 101 QVT-VLLGNL--SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 101 ~~~-~~~~~~--~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
+.. .+.... ...+.++|+||++. +++....+.|..|++..... ...+..-.+....+++.|+|+++++....+
T Consensus 344 ~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~--~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 344 ATTKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFA--VHPLVSRETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp HHHCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTC--CEEEEECSSCEEEEECCSSCCBCEEEETTT
T ss_pred CcccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECccccc--ceeeecCCCceEEEEeCCCCCeEEEEECCC
Confidence 321 122222 12467999999985 56666778899999875321 122332223467889999998766655554
No 287
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.87 E-value=0.22 Score=44.09 Aligned_cols=209 Identities=10% Similarity=0.084 Sum_probs=106.4
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEEcC-------CCCCeeEEEeecCCcceEEEEeCCCCeEEEe-ecCC
Q 024436 39 LAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFARTS-------PNRNHISVILSGDKTGRLMKYDPATKQVTVL-LGNL 109 (268)
Q Consensus 39 ia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~~~~-------~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~~~ 109 (268)
.++..+|+.++++..+|.|..++... +....+.... .++.+ +..+..+|.|..+|..+++.... ....
T Consensus 137 ~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~---l~sg~~dg~i~vwd~~~~~~~~~~~~h~ 213 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVNTGEMLNTLIHHC 213 (435)
T ss_dssp EEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSE---EEEEETTSCEEEEESSSCCEEEEECCCC
T ss_pred EEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCE---EEEEcCCCeEEEEECCCCcEEEEEcCCC
Confidence 36667899999999999999998754 3222221100 01111 22344567888888877765433 3333
Q ss_pred CCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCce-eEEEeCCCCCCceEEcCCCCEEEEEecCCCcceeeeEeeC-
Q 024436 110 SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTI-EIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFP- 187 (268)
Q Consensus 110 ~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~-~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~- 187 (268)
.....+++++ +.| ++.+..+.|..|++..+..... ..+..-.+....+++ +|+.+++....+. |..+.
T Consensus 214 ~~v~~l~~~~--~~l-~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~-----i~vwd~ 283 (435)
T 1p22_A 214 EAVLHLRFNN--GMM-VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRT-----IKVWNT 283 (435)
T ss_dssp SCEEEEECCT--TEE-EEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSE-----EEEEET
T ss_pred CcEEEEEEcC--CEE-EEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCe-----EEEEEC
Confidence 4456788864 344 5666789999999975322111 111111122334555 5666555554442 33332
Q ss_pred ccceeeeeccccceeeeeecc------ccCCCcEEEEEECC-CCCEEEEEEcCCCCceeceEEEEEeCCEEEEeeCCCCe
Q 024436 188 WIGNVLIKLPIDIVKIHSSLV------KLSGNGGMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMPY 260 (268)
Q Consensus 188 ~~g~~l~~i~~~~~~~~~~~~------~~~~~~~~~~~~~~-~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~~~~~ 260 (268)
..++.+..+......+.++.. ..... +.+...|. .|+.+..+.... ..++.+...+..|+.|+ .+..
T Consensus 284 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~d-g~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~~~~l~sg~-~dg~ 357 (435)
T 1p22_A 284 STCEFVRTLNGHKRGIACLQYRDRLVVSGSSD-NTIRLWDIECGACLRVLEGHE----ELVRCIRFDNKRIVSGA-YDGK 357 (435)
T ss_dssp TTCCEEEEEECCSSCEEEEEEETTEEEEEETT-SCEEEEETTTCCEEEEECCCS----SCEEEEECCSSEEEEEE-TTSC
T ss_pred CcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCC-CeEEEEECCCCCEEEEEeCCc----CcEEEEEecCCEEEEEe-CCCc
Confidence 445555544432222222110 00111 22344444 366666665432 22344444444455554 5566
Q ss_pred EEEEeC
Q 024436 261 AGLYNY 266 (268)
Q Consensus 261 v~~~~~ 266 (268)
|.+.++
T Consensus 358 i~vwd~ 363 (435)
T 1p22_A 358 IKVWDL 363 (435)
T ss_dssp EEEEEH
T ss_pred EEEEEC
Confidence 776654
No 288
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.78 E-value=0.22 Score=47.62 Aligned_cols=66 Identities=24% Similarity=0.360 Sum_probs=41.4
Q ss_pred eEEECCCCCEEEEEeCCCe-------------------EEEEeCC-CCe-EEEEEEcCC-------CCCeeE--------
Q 024436 38 SLAFDALGEGPYTGVSDGR-------------------IIKWHQD-QRR-WLHFARTSP-------NRNHIS-------- 81 (268)
Q Consensus 38 gia~~~dG~~l~~~~~~g~-------------------I~~~~~~-g~~-~~~~~~~~~-------~~~~~~-------- 81 (268)
.++++|+++++|+...++. |+.++++ |+. |........ ....+.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5789999999999887764 8899875 543 322110000 000111
Q ss_pred --EEeecCCcceEEEEeCCCCeEE
Q 024436 82 --VILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 82 --~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
.+.....+|.++.+|.++|++.
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEEEECCCCeEEEEECCCCCEe
Confidence 2334567899999999999864
No 289
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.69 E-value=0.27 Score=42.57 Aligned_cols=200 Identities=12% Similarity=0.077 Sum_probs=99.2
Q ss_pred CCEEEEEeCCCeEEEEeC-CCCe-EEEEEEcCC------CCCeeE-------EEeecCCcceEEEEeCCCCeEEEeec-C
Q 024436 45 GEGPYTGVSDGRIIKWHQ-DQRR-WLHFARTSP------NRNHIS-------VILSGDKTGRLMKYDPATKQVTVLLG-N 108 (268)
Q Consensus 45 G~~l~~~~~~g~I~~~~~-~g~~-~~~~~~~~~------~~~~~~-------~~~~~~~~g~v~~~d~~~~~~~~~~~-~ 108 (268)
++.+|+...++.|+.+++ +|+. |..-..... ...... .++.....+.|+.+|+++|+..--.. .
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 455777778899999998 4653 322110000 111000 11122345789999998887542211 1
Q ss_pred CCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eCCCC------CCceEEcCCCCEEEEEecCCCccee
Q 024436 109 LSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPGF------PDNIKRSPRGGFWVGIHSRRKGISK 181 (268)
Q Consensus 109 ~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l~g~------Pdgia~d~dG~l~va~~~~~~~~~~ 181 (268)
.......++. ++ .+|+.. ..+.|+.++..+++ ..+. ..+.. ....+++ +|.+|++...+.
T Consensus 133 ~~~~~~p~~~-~~-~v~v~~-~~g~l~~~d~~tG~----~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~----- 199 (376)
T 3q7m_A 133 GEALSRPVVS-DG-LVLIHT-SNGQLQALNEADGA----VKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGR----- 199 (376)
T ss_dssp SCCCSCCEEE-TT-EEEEEC-TTSEEEEEETTTCC----EEEEEECCC-----CCCCCCEEE-TTEEEECCTTTE-----
T ss_pred CceEcCCEEE-CC-EEEEEc-CCCeEEEEECCCCc----EEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCE-----
Confidence 1111122333 44 688764 56789999986432 1121 11110 1233444 567888654432
Q ss_pred eeEe-eCccceeeeeccccce---------------eee---eeccccCCCcEEEEEECC-CCCEEEEEEcCCCCceece
Q 024436 182 LVLS-FPWIGNVLIKLPIDIV---------------KIH---SSLVKLSGNGGMAMRISE-QGNVLEILEEIGRKMWRSI 241 (268)
Q Consensus 182 ~v~~-~~~~g~~l~~i~~~~~---------------~~~---~~~~~~~~~~~~~~~~~~-~G~~~~~~~~~~g~~~~~~ 241 (268)
+.. ...+|+.+.+.+.+.. +.. .++-. ... +.+..+++ +|+.+..... ...
T Consensus 200 -l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~-~~~-g~l~~~d~~tG~~~w~~~~------~~~ 270 (376)
T 3q7m_A 200 -VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFAL-AYN-GNLTALDLRSGQIMWKREL------GSV 270 (376)
T ss_dssp -EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEE-CTT-SCEEEEETTTCCEEEEECC------CCE
T ss_pred -EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEE-ecC-cEEEEEECCCCcEEeeccC------CCC
Confidence 333 3457777655543210 000 00000 111 23555555 4665544432 123
Q ss_pred EEEEEeCCEEEEeeCCCCeEEEEeCC
Q 024436 242 SEVEEKDGNLWIGSVNMPYAGLYNYS 267 (268)
Q Consensus 242 s~~~~~~g~Lyv~s~~~~~v~~~~~~ 267 (268)
...+..+++||+++. +..|..++.+
T Consensus 271 ~~~~~~~~~l~~~~~-~g~l~~~d~~ 295 (376)
T 3q7m_A 271 NDFIVDGNRIYLVDQ-NDRVMALTID 295 (376)
T ss_dssp EEEEEETTEEEEEET-TCCEEEEETT
T ss_pred CCceEECCEEEEEcC-CCeEEEEECC
Confidence 445667999999986 4467777764
No 290
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.68 E-value=0.11 Score=47.98 Aligned_cols=136 Identities=11% Similarity=0.004 Sum_probs=83.9
Q ss_pred CcceEEECCC------CCEEEEEeCCCeEEEEeCCCCe-----E-------EEEE---------EcCCCCCeeEEEeecC
Q 024436 35 GPESLAFDAL------GEGPYTGVSDGRIIKWHQDQRR-----W-------LHFA---------RTSPNRNHISVILSGD 87 (268)
Q Consensus 35 ~P~gia~~~d------G~~l~~~~~~g~I~~~~~~g~~-----~-------~~~~---------~~~~~~~~~~~~~~~~ 87 (268)
....+++.|+ +++++++..||.|..|+..... . ..+. ...++ . .+..+.
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~---~lasgs 284 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-T---TVVCGF 284 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-S---EEEEEE
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-C---eEEEEe
Confidence 4678999986 5788989999999988864321 0 0110 00111 1 133445
Q ss_pred CcceEEEEeCCCCeE--EEeecCCCCcceE--EEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eCC-CCCCceE
Q 024436 88 KTGRLMKYDPATKQV--TVLLGNLSFPNGV--ALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLP-GFPDNIK 161 (268)
Q Consensus 88 ~~g~v~~~d~~~~~~--~~~~~~~~~pnGi--a~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l~-g~Pdgia 161 (268)
.+|.|..+|..+++. ..+...-..-+.| +++|+|..++++-+..+.|..|++..... ...+. ... +....++
T Consensus 285 ~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~--~~~~~~~~~~~~v~~v~ 362 (524)
T 2j04_B 285 KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT--TKTTVSRFRGSNLVPVV 362 (524)
T ss_dssp TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH--HCEEEEECSCCSCCCEE
T ss_pred CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc--ccccccccccCcccceE
Confidence 678888888875422 2233444455778 57888734677888899999999864221 11221 222 1245789
Q ss_pred EcCCCCEEEEEecCC
Q 024436 162 RSPRGGFWVGIHSRR 176 (268)
Q Consensus 162 ~d~dG~l~va~~~~~ 176 (268)
+.|+|..+++....+
T Consensus 363 fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 363 YCPQIYSYIYSDGAS 377 (524)
T ss_dssp EETTTTEEEEECSSS
T ss_pred eCCCcCeEEEeCCCC
Confidence 999998877765554
No 291
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.63 E-value=0.45 Score=45.59 Aligned_cols=156 Identities=13% Similarity=0.095 Sum_probs=82.4
Q ss_pred ceEEECCCCCEEEEEeCC--------------CeEEEEeCCCCe---EEEE-----------EEcCCCCCeeEEEeecC-
Q 024436 37 ESLAFDALGEGPYTGVSD--------------GRIIKWHQDQRR---WLHF-----------ARTSPNRNHISVILSGD- 87 (268)
Q Consensus 37 ~gia~~~dG~~l~~~~~~--------------g~I~~~~~~g~~---~~~~-----------~~~~~~~~~~~~~~~~~- 87 (268)
.+++++|| +.++....+ .+|++++..+.. ...+ ...++++.++.......
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 46789999 655554432 247777754321 1111 12345555554333222
Q ss_pred -CcceEEEEeCCCC--e-EEEeecCCCCcceEEEccCCCEEEEEec---CCcEEEEEEccCCCCCceeEEEe-CCCCCCc
Q 024436 88 -KTGRLMKYDPATK--Q-VTVLLGNLSFPNGVALSEDGNYILLAET---TSCRILRYWLKTSKAGTIEIVAQ-LPGFPDN 159 (268)
Q Consensus 88 -~~g~v~~~d~~~~--~-~~~~~~~~~~pnGia~spdg~~lyva~~---~~~~I~~~~~~~~~~g~~~~~~~-l~g~Pdg 159 (268)
.+..|+.+|.+++ + .+.+......-... ++|||+.||+... .+.+|++++++++. +....+.. ......+
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLES 368 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEE
T ss_pred CCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEE
Confidence 3558999988766 5 56665544333334 4589998888643 24689999987532 22222221 1122335
Q ss_pred eEEcCCCCEEEEEecCCCcceeeeEeeCccceeeeecccc
Q 024436 160 IKRSPRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPID 199 (268)
Q Consensus 160 ia~d~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~ 199 (268)
++++ ++.++++....... -|..+...|+....++.+
T Consensus 369 ~~~~-~~~lv~~~~~dg~~---~l~~~~~~g~~~~~l~~~ 404 (741)
T 1yr2_A 369 VGIA-GNRLFASYIHDAKS---QVLAFDLDGKPAGAVSLP 404 (741)
T ss_dssp EEEE-BTEEEEEEEETTEE---EEEEEETTSCEEEECBCS
T ss_pred EEEE-CCEEEEEEEECCEE---EEEEEeCCCCceeeccCC
Confidence 5666 45666655443321 133344456655555543
No 292
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.60 E-value=0.44 Score=45.33 Aligned_cols=66 Identities=20% Similarity=0.364 Sum_probs=40.6
Q ss_pred eEEECCCCCEEEEEeCCC-------------------eEEEEeCC-CCe-EEEEEEcCC-------CCCeeE--------
Q 024436 38 SLAFDALGEGPYTGVSDG-------------------RIIKWHQD-QRR-WLHFARTSP-------NRNHIS-------- 81 (268)
Q Consensus 38 gia~~~dG~~l~~~~~~g-------------------~I~~~~~~-g~~-~~~~~~~~~-------~~~~~~-------- 81 (268)
.++++++++++|+...++ .|+.++++ |+. |..-..... ....+.
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 478999988899887765 38888864 542 322111000 011111
Q ss_pred --EEeecCCcceEEEEeCCCCeEE
Q 024436 82 --VILSGDKTGRLMKYDPATKQVT 103 (268)
Q Consensus 82 --~~~~~~~~g~v~~~d~~~~~~~ 103 (268)
.++....+|.+|.+|.++|++.
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEEEECCCCEEEEEECCCCCEe
Confidence 2344567899999999988764
No 293
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.48 E-value=0.0093 Score=53.80 Aligned_cols=102 Identities=11% Similarity=0.077 Sum_probs=63.8
Q ss_pred CcceEEECCCCCEEE----EEeCCCeEEEEeCCC---------CeEEEEE------------EcCCC-CCeeEEEeecCC
Q 024436 35 GPESLAFDALGEGPY----TGVSDGRIIKWHQDQ---------RRWLHFA------------RTSPN-RNHISVILSGDK 88 (268)
Q Consensus 35 ~P~gia~~~dG~~l~----~~~~~g~I~~~~~~g---------~~~~~~~------------~~~~~-~~~~~~~~~~~~ 88 (268)
...+++++|+|++++ ++..++.|..|+... +.+..+. ...+. +.++ .....
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l---as~s~ 170 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV---AVCLA 170 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEE---EEEET
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEE---EEEEC
Confidence 589999999999888 445678888876421 1001111 11222 2222 12335
Q ss_pred cceEEEEeCCCCeEEE-eecCCCCcceEEEccCCCEEEEEecCCcEEEEEEcc
Q 024436 89 TGRLMKYDPATKQVTV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK 140 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~-~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~ 140 (268)
+|.|..+|..+++... ....-...+.++|+|||++|+++. ..+.|..|++.
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~ 222 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPT 222 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTT
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccC
Confidence 6778888877664322 222334578999999999776554 67899999987
No 294
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.48 E-value=0.57 Score=43.85 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=24.8
Q ss_pred EEEEEECC-CCCEEEEEEcCCCCceeceEEEEEeCCEEEEeeC
Q 024436 215 GMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSV 256 (268)
Q Consensus 215 ~~~~~~~~-~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~ 256 (268)
+.+.++|. +|+.+..+..+.+- ...+. +...+|++||+..
T Consensus 507 g~l~A~D~~tG~~lW~~~~~~g~-~a~P~-~y~~~G~qYv~~~ 547 (582)
T 1flg_A 507 GYFKAFDAKSGKELWKFQTGSGI-VSPPI-TWEQDGEQYLGVT 547 (582)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-CSCCE-EEEETTEEEEEEE
T ss_pred CcEEEEECCCCCEEEEecCCCCc-ccCce-EEEECCEEEEEEE
Confidence 55777776 58888888776442 22222 2247888888743
No 295
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.40 E-value=0.036 Score=51.66 Aligned_cols=91 Identities=20% Similarity=0.158 Sum_probs=65.3
Q ss_pred eEEEEeCCC-----CeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccC------CCC-Cc-eeEEEe--CCC
Q 024436 91 RLMKYDPAT-----KQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKT------SKA-GT-IEIVAQ--LPG 155 (268)
Q Consensus 91 ~v~~~d~~~-----~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~------~~~-g~-~~~~~~--l~g 155 (268)
.+-++|+.. ..+......-..|.|+.++|||+++|++.-.+.++.+|+.+. .++ .. ..++++ +.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 466787763 124445555688999999999999999999999999999872 111 11 122333 223
Q ss_pred CCCceEEcCCCCEEEEEecCCCcceee
Q 024436 156 FPDNIKRSPRGGFWVGIHSRRKGISKL 182 (268)
Q Consensus 156 ~Pdgia~d~dG~l~va~~~~~~~~~~~ 182 (268)
.|--.++|++|+.|.+.+-.. .+.+|
T Consensus 379 GPlHt~Fd~~G~aYTtlfidS-qvvkW 404 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDS-QVVKW 404 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTT-EEEEE
T ss_pred cccEEEECCCCceEeeeeecc-eEEEE
Confidence 599999999999999998776 44444
No 296
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.38 E-value=0.015 Score=49.70 Aligned_cols=76 Identities=9% Similarity=0.045 Sum_probs=53.2
Q ss_pred cceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecC----CcEEEEEEccCCCCCceeEEEeCCCCCCceEEcC
Q 024436 89 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETT----SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP 164 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~----~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~ 164 (268)
.+.|+.+|.++++.+.+ .....++|+|||++|+++... ...|++++++++ ....+...+. ...+++.|
T Consensus 42 ~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g---~~~~l~~~~~-~~~~~wsp 113 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL---SSKKILEAKN-IRSLEWNE 113 (347)
T ss_dssp EEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT---EEEEEEEESE-EEEEEECT
T ss_pred cceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC---ceEEEEcCCC-ccceeECC
Confidence 46799999988877666 446689999999988776532 346999998753 2333333334 67889999
Q ss_pred CCC-EEEEE
Q 024436 165 RGG-FWVGI 172 (268)
Q Consensus 165 dG~-l~va~ 172 (268)
||+ |+.+.
T Consensus 114 dg~~l~~~~ 122 (347)
T 2gop_A 114 DSRKLLIVG 122 (347)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEE
Confidence 997 55544
No 297
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.34 E-value=0.68 Score=44.38 Aligned_cols=132 Identities=18% Similarity=0.205 Sum_probs=69.2
Q ss_pred cceEEECCCCCEEEEEeCCCeEEEEeCCCC---eEEEEEEcC-C---CCCeeEEEeecC-------CcceEEEEeCCCCe
Q 024436 36 PESLAFDALGEGPYTGVSDGRIIKWHQDQR---RWLHFARTS-P---NRNHISVILSGD-------KTGRLMKYDPATKQ 101 (268)
Q Consensus 36 P~gia~~~dG~~l~~~~~~g~I~~~~~~g~---~~~~~~~~~-~---~~~~~~~~~~~~-------~~g~v~~~d~~~~~ 101 (268)
-.++..+++|++++ +.. +.+.++++... .+..+.... + ..+.+..+.++. ..+.|+++|+++++
T Consensus 326 v~~i~~D~~g~lWi-Gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~GL~~~~~~~~~ 403 (758)
T 3ott_A 326 FYSLFRDSKGFYWF-GGA-NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIATDGSINRYDYATRQ 403 (758)
T ss_dssp EEEEEECTTCCEEE-EET-TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEETTEEEEEETTTTE
T ss_pred EEEEEEcCCCCEEE-eeC-CcceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEeCCcHhhcCcCCCc
Confidence 46778889999554 444 45778865431 111111000 0 001122222111 02478999998887
Q ss_pred EEEee--cC-----CCCcceEEEccCCCEEEEEecCCcEEEEEEccCC---CCCce---eEEEeCCCC----CCceEEcC
Q 024436 102 VTVLL--GN-----LSFPNGVALSEDGNYILLAETTSCRILRYWLKTS---KAGTI---EIVAQLPGF----PDNIKRSP 164 (268)
Q Consensus 102 ~~~~~--~~-----~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~---~~g~~---~~~~~l~g~----Pdgia~d~ 164 (268)
.+... .. ......|..+++| .||++- ..+-|++|+.+.. ..+.. ..+....+. ...|..|+
T Consensus 404 ~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigT-~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~ 481 (758)
T 3ott_A 404 FIHYNIVDNTGTYNTNWTYYIFEDTAG-QLWIST-CLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDN 481 (758)
T ss_dssp EEEEEEECCC--CBSSSEEEEEECTTS-EEEEEE-SSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECT
T ss_pred EEEeecCCCcCCCCCceEEEEEEcCCC-CEEEEE-CCCceEEEccccccccCCcceecccccccccccccceeeeEEEcC
Confidence 76543 11 1123467777777 599874 3456888886521 00001 111111223 34588999
Q ss_pred CCCEEEE
Q 024436 165 RGGFWVG 171 (268)
Q Consensus 165 dG~l~va 171 (268)
+|+||++
T Consensus 482 ~g~lWi~ 488 (758)
T 3ott_A 482 EGNVWVL 488 (758)
T ss_dssp TSCEEEE
T ss_pred CCCEEEE
Confidence 9999993
No 298
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.27 E-value=0.11 Score=46.16 Aligned_cols=61 Identities=16% Similarity=0.293 Sum_probs=46.2
Q ss_pred eEEEc-cCCCEEEEEecCCcEEEEEEccC-CC-CCceeEEEeCC--CCCCceEEcCCCCEEEEEecC
Q 024436 114 GVALS-EDGNYILLAETTSCRILRYWLKT-SK-AGTIEIVAQLP--GFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 114 Gia~s-pdg~~lyva~~~~~~I~~~~~~~-~~-~g~~~~~~~l~--g~Pdgia~d~dG~l~va~~~~ 175 (268)
+++++ .+| .||+++...+.|.+|+.++ .. ..+...+.+-+ ..|+++.+|.+|.||+....-
T Consensus 279 ~~~~D~~~G-~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~l 344 (381)
T 3q6k_A 279 ALAYDPKTK-VIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNGF 344 (381)
T ss_dssp EEEECTTTC-EEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECSC
T ss_pred eEEEeCCCC-eEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECcc
Confidence 56776 556 7999999999999999876 32 23455655422 369999999999999987543
No 299
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.24 E-value=0.022 Score=53.63 Aligned_cols=65 Identities=22% Similarity=0.289 Sum_probs=44.9
Q ss_pred CCCCcceEEEccCCCEEEEEecC------------CcEEEEEEccCCCCCceeEEEeCC--CCCCceEEcCCCC-EEEEE
Q 024436 108 NLSFPNGVALSEDGNYILLAETT------------SCRILRYWLKTSKAGTIEIVAQLP--GFPDNIKRSPRGG-FWVGI 172 (268)
Q Consensus 108 ~~~~pnGia~spdg~~lyva~~~------------~~~I~~~~~~~~~~g~~~~~~~l~--g~Pdgia~d~dG~-l~va~ 172 (268)
.+..|-+|+|+|+|+ |||++-. ++.++.++... ++...|...| .-..|++++|||+ |||..
T Consensus 474 ~f~~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~---g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 474 MFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPAT---GEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTT---CCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CccCCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCC---CeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 467889999999997 6666432 35677776543 4566676543 2356999999996 88876
Q ss_pred ecCC
Q 024436 173 HSRR 176 (268)
Q Consensus 173 ~~~~ 176 (268)
...+
T Consensus 550 QHPG 553 (592)
T 3zwu_A 550 QHPG 553 (592)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 5443
No 300
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.14 E-value=0.54 Score=44.69 Aligned_cols=82 Identities=9% Similarity=-0.017 Sum_probs=49.6
Q ss_pred cceEEEEeCCCCeEEEee-cCCCCcceEEEccCCCEEEEEecC------------CcEEEEEEccCCCCCceeEEEeCCC
Q 024436 89 TGRLMKYDPATKQVTVLL-GNLSFPNGVALSEDGNYILLAETT------------SCRILRYWLKTSKAGTIEIVAQLPG 155 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~-~~~~~pnGia~spdg~~lyva~~~------------~~~I~~~~~~~~~~g~~~~~~~l~g 155 (268)
...|+.+|.++|+..... ... ...+++|+ ||+.||++... ..+|+++++.++.. ....+.+.+.
T Consensus 154 ~~~i~v~dl~tg~~~~~~~~~~-k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-~~~~v~~~~~ 230 (693)
T 3iuj_A 154 WREIHLMDVESKQPLETPLKDV-KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQE-DDRLVFGAIP 230 (693)
T ss_dssp EEEEEEEETTTCSEEEEEEEEE-ESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGG-GCEEEESCSG
T ss_pred eEEEEEEECCCCCCCccccCCc-eeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcc-cceEEEecCC
Confidence 357899999988754431 111 12478999 99999887644 25799999864321 2223333222
Q ss_pred -CC---CceEEcCCCC-EEEEEe
Q 024436 156 -FP---DNIKRSPRGG-FWVGIH 173 (268)
Q Consensus 156 -~P---dgia~d~dG~-l~va~~ 173 (268)
.| .++.+++||+ |++...
T Consensus 231 ~~~~~~~~~~~SpDg~~l~~~~~ 253 (693)
T 3iuj_A 231 AQHHRYVGATVTEDDRFLLISAA 253 (693)
T ss_dssp GGCCSEEEEEECTTSCEEEEEEE
T ss_pred CCCeEEEEEEEcCCCCEEEEEEc
Confidence 12 3678899998 444443
No 301
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.11 E-value=0.64 Score=40.78 Aligned_cols=137 Identities=12% Similarity=-0.022 Sum_probs=73.6
Q ss_pred ceEEECC---CCCEEEEEeCCCeEEEEeCC-CCeEEEEEE------------cCCCCCeeE---------EEeecCCcce
Q 024436 37 ESLAFDA---LGEGPYTGVSDGRIIKWHQD-QRRWLHFAR------------TSPNRNHIS---------VILSGDKTGR 91 (268)
Q Consensus 37 ~gia~~~---dG~~l~~~~~~g~I~~~~~~-g~~~~~~~~------------~~~~~~~~~---------~~~~~~~~g~ 91 (268)
+.++|++ ++++++++..|+.|..|+.. |+.+..+.. .+|++.+.. +..++...+.
T Consensus 182 ~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp CEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE
T ss_pred eeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 4467777 77888888999999999976 554444421 112221111 1123345567
Q ss_pred EEEEeCCCCeEEEeec----CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCC-ceEEcCCC
Q 024436 92 LMKYDPATKQVTVLLG----NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPD-NIKRSPRG 166 (268)
Q Consensus 92 v~~~d~~~~~~~~~~~----~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pd-gia~d~dG 166 (268)
+..+|+++++...... ....-+-+..+.++. +.++-+.++.|..||+..++. ...+..-...+. .+++.|||
T Consensus 262 IklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~-~lASgS~DgTIkIWDl~tGk~--l~tL~gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDH-CAAAILTSGTIAIWDLLLGQC--TALLPPVSDQHWSFVKWSGTD 338 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETT-EEEEEETTSCEEEEETTTCSE--EEEECCC--CCCCEEEECSSS
T ss_pred EEEEECCCCEEEEEEEeeccCCCcceeEccccCCC-EEEEEcCCCcEEEEECCCCcE--EEEecCCCCCeEEEEEECCCC
Confidence 7778888776533210 000001122222243 556777788999999975321 122211111233 37899999
Q ss_pred CEEEEEecCC
Q 024436 167 GFWVGIHSRR 176 (268)
Q Consensus 167 ~l~va~~~~~ 176 (268)
+++++....+
T Consensus 339 ~~LaSGS~D~ 348 (356)
T 2w18_A 339 SHLLAGQKDG 348 (356)
T ss_dssp SEEEEECTTS
T ss_pred CEEEEEECCC
Confidence 9777665544
No 302
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.06 E-value=0.71 Score=40.79 Aligned_cols=98 Identities=11% Similarity=0.124 Sum_probs=63.3
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCCC-eEEEEEEc---------CCCCCeeEEEeecCCcceEEEEeCCCCeEEEeec-C
Q 024436 40 AFDALGEGPYTGVSDGRIIKWHQDQR-RWLHFART---------SPNRNHISVILSGDKTGRLMKYDPATKQVTVLLG-N 108 (268)
Q Consensus 40 a~~~dG~~l~~~~~~g~I~~~~~~g~-~~~~~~~~---------~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~ 108 (268)
++..++++++++..||.|..|+.... ....+... .++. .+..+..++.|..+|.++++...... .
T Consensus 127 ~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~----~l~s~s~dg~i~vwd~~~~~~~~~~~~h 202 (464)
T 3v7d_B 127 CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG----ILVSGSTDRTVRVWDIKKGCCTHVFEGH 202 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT----EEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC----EEEEEeCCCCEEEEECCCCcEEEEECCC
Confidence 45557788999999999999996543 22222110 1111 12344567888888888776554443 4
Q ss_pred CCCcceEEEc--cCCCEEEEEecCCcEEEEEEccCC
Q 024436 109 LSFPNGVALS--EDGNYILLAETTSCRILRYWLKTS 142 (268)
Q Consensus 109 ~~~pnGia~s--pdg~~lyva~~~~~~I~~~~~~~~ 142 (268)
....+.++++ ++++ ++++.+..+.|..|++...
T Consensus 203 ~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 203 NSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKE 237 (464)
T ss_dssp SSCEEEEEEEESSSCE-EEEEEETTSCEEEEECCCC
T ss_pred CCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCCCC
Confidence 4455788888 4665 5556677899999998753
No 303
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.04 E-value=1 Score=42.40 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=26.0
Q ss_pred EEEEEECC-CCCEEEEEEcCCCCceeceEEEEEeCCEEEEeeC
Q 024436 215 GMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSV 256 (268)
Q Consensus 215 ~~~~~~~~-~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~ 256 (268)
+.+.++|. +|+.+..++-+.|. ...+.. ...+|++||+..
T Consensus 494 g~l~A~D~~tG~~lW~~~l~~g~-~~~P~~-y~~~G~qyv~~~ 534 (599)
T 1w6s_A 494 GYLKARDSDTGDLLWKFKIPSGA-IGYPMT-YTHKGTQYVAIY 534 (599)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-CSCCEE-EEETTEEEEEEE
T ss_pred CeEEEEECCCCCEEEEeeCCCCc-EeccEE-EEeCCEEEEEEE
Confidence 56778887 59998888776542 232222 247889888654
No 304
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.01 E-value=0.93 Score=43.06 Aligned_cols=156 Identities=11% Similarity=0.141 Sum_probs=81.8
Q ss_pred ceEEECCCCCEEEEEeCC-------------CeEEEEeCCCCe---EEE------------EEEcCCCCCeeEEEeecC-
Q 024436 37 ESLAFDALGEGPYTGVSD-------------GRIIKWHQDQRR---WLH------------FARTSPNRNHISVILSGD- 87 (268)
Q Consensus 37 ~gia~~~dG~~l~~~~~~-------------g~I~~~~~~g~~---~~~------------~~~~~~~~~~~~~~~~~~- 87 (268)
.+++++ ||+.++....+ .+|++++..... ... ....++++.++.......
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 456888 88866554433 357777643210 111 112345555543332222
Q ss_pred CcceEEEEeCCCC--eEEEeecCCCCcceEEEccCCCEEEEEecC---CcEEEEEEccCCCCCceeEEEeCCCCCCceEE
Q 024436 88 KTGRLMKYDPATK--QVTVLLGNLSFPNGVALSEDGNYILLAETT---SCRILRYWLKTSKAGTIEIVAQLPGFPDNIKR 162 (268)
Q Consensus 88 ~~g~v~~~d~~~~--~~~~~~~~~~~pnGia~spdg~~lyva~~~---~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~ 162 (268)
....||.+|.+++ +.+.+......-... ++++|+.||+.... +.+|++++++++.....+.+.. ..++-+.+
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~--~~~~~~~~ 333 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP--ERQQVLTV 333 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC--CCSSCEEE
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec--CCCCEEEE
Confidence 3358999997654 556665443322222 67888888876432 4699999998643322344332 22233366
Q ss_pred cCCCC-EEEEEecCCCcceeeeEeeCccceeeeecccc
Q 024436 163 SPRGG-FWVGIHSRRKGISKLVLSFPWIGNVLIKLPID 199 (268)
Q Consensus 163 d~dG~-l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~ 199 (268)
+++|+ |+++....... -|..++..++....++.+
T Consensus 334 s~~g~~lv~~~~~~g~~---~l~~~d~~g~~~~~l~~p 368 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDATA---RVEQFDYEGKRVREVALP 368 (693)
T ss_dssp EEETTEEEEEEEETTEE---EEEEECTTSCEEEEECCS
T ss_pred EEECCEEEEEEEECCee---EEEEEECCCCeeEEeecC
Confidence 67776 44444333211 144455556665655544
No 305
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.78 E-value=0.93 Score=39.93 Aligned_cols=209 Identities=14% Similarity=0.098 Sum_probs=105.6
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEEEcCCCCCee-----EEEeecCCcceEEEEeCCCCeEEEeec-CCCCc
Q 024436 40 AFDALGEGPYTGVSDGRIIKWHQD-QRRWLHFARTSPNRNHI-----SVILSGDKTGRLMKYDPATKQVTVLLG-NLSFP 112 (268)
Q Consensus 40 a~~~dG~~l~~~~~~g~I~~~~~~-g~~~~~~~~~~~~~~~~-----~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p 112 (268)
++.++|+.++++..+|.|..|+.. ++....+... ...-+. ..+..+..++.|..+|.++++...... .-...
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v 202 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH-TGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV 202 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCC-SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCC-CCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcE
Confidence 566789999999999999999875 3322222100 000000 012244567888999988776544433 33445
Q ss_pred ceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCCCcceeeeEeeC-ccce
Q 024436 113 NGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKLVLSFP-WIGN 191 (268)
Q Consensus 113 nGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~~~v~~~~-~~g~ 191 (268)
+.++++ ++.+ ++.+..+.|..|++..+.. ...+..-.+....+++ +|+++++....+. |..+. ..++
T Consensus 203 ~~~~~~--~~~l-~s~s~dg~i~~wd~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-----i~iwd~~~~~ 270 (445)
T 2ovr_B 203 RCMHLH--EKRV-VSGSRDATLRVWDIETGQC--LHVLMGHVAAVRCVQY--DGRRVVSGAYDFM-----VKVWDPETET 270 (445)
T ss_dssp EEEEEE--TTEE-EEEETTSEEEEEESSSCCE--EEEEECCSSCEEEEEE--CSSCEEEEETTSC-----EEEEEGGGTE
T ss_pred EEEEec--CCEE-EEEeCCCEEEEEECCCCcE--EEEEcCCcccEEEEEE--CCCEEEEEcCCCE-----EEEEECCCCc
Confidence 677775 4445 4556779999999875321 1222211223345555 5654444444432 33332 3455
Q ss_pred eeeeccccceeeeeeccc------cCCCcEEEEEECC-CCCEEEEEEcCCCCceeceEEEEEeCCEEEEeeCCCCeEEEE
Q 024436 192 VLIKLPIDIVKIHSSLVK------LSGNGGMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKDGNLWIGSVNMPYAGLY 264 (268)
Q Consensus 192 ~l~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~-~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~s~~~~~v~~~ 264 (268)
.+..+......+.++... .... +.+...+. +++.+..+.... ..+..+...++.|+.++ .+..|.+.
T Consensus 271 ~~~~~~~~~~~v~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~----~~v~~~~~~~~~l~~~~-~dg~i~vw 344 (445)
T 2ovr_B 271 CLHTLQGHTNRVYSLQFDGIHVVSGSLD-TSIRVWDVETGNCIHTLTGHQ----SLTSGMELKDNILVSGN-ADSTVKIW 344 (445)
T ss_dssp EEEEECCCSSCEEEEEECSSEEEEEETT-SCEEEEETTTCCEEEEECCCC----SCEEEEEEETTEEEEEE-TTSCEEEE
T ss_pred EeEEecCCCCceEEEEECCCEEEEEeCC-CeEEEEECCCCCEEEEEcCCc----ccEEEEEEeCCEEEEEe-CCCeEEEE
Confidence 555544322222222100 0011 22333333 355555554332 22334444555555554 55677777
Q ss_pred eCC
Q 024436 265 NYS 267 (268)
Q Consensus 265 ~~~ 267 (268)
+++
T Consensus 345 d~~ 347 (445)
T 2ovr_B 345 DIK 347 (445)
T ss_dssp ETT
T ss_pred ECC
Confidence 764
No 306
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=95.75 E-value=0.84 Score=39.83 Aligned_cols=102 Identities=11% Similarity=-0.072 Sum_probs=59.7
Q ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEE---cCCCCC------e-----------eEEEeecCCcceEEEEeCCC-
Q 024436 41 FDALGEGPYTGVSDGRIIKWHQDQRRWLHFAR---TSPNRN------H-----------ISVILSGDKTGRLMKYDPAT- 99 (268)
Q Consensus 41 ~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~---~~~~~~------~-----------~~~~~~~~~~g~v~~~d~~~- 99 (268)
+.+++.++.++..|+.|..|+.+......... ..+... | ...+.+...++.|..+|..+
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 34456667788889988888765432111111 111111 0 01122333445555555433
Q ss_pred CeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCC
Q 024436 100 KQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 142 (268)
Q Consensus 100 ~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~ 142 (268)
+....+...-.....++|+|++..++++....+.|..|++..+
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 3444555555566899999998767777788899999998743
No 307
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.54 E-value=0.7 Score=44.54 Aligned_cols=82 Identities=9% Similarity=0.124 Sum_probs=48.4
Q ss_pred ceEEEEeCCCC-eEEEeecCCC-CcceEEEccCCCEEEEEecCC----cEEEEEEccCCCCCceeEEEe-CCCCCCceEE
Q 024436 90 GRLMKYDPATK-QVTVLLGNLS-FPNGVALSEDGNYILLAETTS----CRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKR 162 (268)
Q Consensus 90 g~v~~~d~~~~-~~~~~~~~~~-~pnGia~spdg~~lyva~~~~----~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~ 162 (268)
..|+.+|.+++ +. +.+.+. ...+++|+|||+.||++.... .+|+++++.++......++.. -...--++.+
T Consensus 201 ~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~ 278 (751)
T 2xe4_A 201 YTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYK 278 (751)
T ss_dssp EEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEE
T ss_pred EEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEE
Confidence 46999999877 52 111111 135799999998888775432 479999987543222233322 1122235678
Q ss_pred cCCCC-EEEEEe
Q 024436 163 SPRGG-FWVGIH 173 (268)
Q Consensus 163 d~dG~-l~va~~ 173 (268)
++||+ |++..+
T Consensus 279 SpDg~~l~~~~~ 290 (751)
T 2xe4_A 279 AADTNTLCIGSQ 290 (751)
T ss_dssp CTTSSEEEEEEE
T ss_pred CCCCCEEEEEec
Confidence 99997 444444
No 308
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.49 E-value=1.2 Score=39.19 Aligned_cols=210 Identities=14% Similarity=0.145 Sum_probs=108.4
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEEcCC-------CCCeeEEEeecCCcceEEEEeCCCCeEEE-e
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFARTSP-------NRNHISVILSGDKTGRLMKYDPATKQVTV-L 105 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~~~~~-------~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-~ 105 (268)
...+++++ +++++++..+|.|..|+.+... ...+..... ..++ +..+..++.|..+|..+++... +
T Consensus 161 ~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~---l~s~s~dg~i~~wd~~~~~~~~~~ 235 (445)
T 2ovr_B 161 GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVL 235 (445)
T ss_dssp CEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTE---EEEEETTSEEEEEESSSCCEEEEE
T ss_pred CEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCE---EEEEeCCCEEEEEECCCCcEEEEE
Confidence 45566665 6788999999999999875432 222210000 0111 2334567888889887666543 3
Q ss_pred ecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCC---CCCCceEEcCCCCEEEEEecCCCcceee
Q 024436 106 LGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLP---GFPDNIKRSPRGGFWVGIHSRRKGISKL 182 (268)
Q Consensus 106 ~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~---g~Pdgia~d~dG~l~va~~~~~~~~~~~ 182 (268)
.......+.+++ +++.++ +.+..+.|..|++..+ +....+. +....+++ +|+.+++....+.
T Consensus 236 ~~~~~~v~~~~~--~~~~l~-~~~~dg~i~iwd~~~~-----~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~----- 300 (445)
T 2ovr_B 236 MGHVAAVRCVQY--DGRRVV-SGAYDFMVKVWDPETE-----TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS----- 300 (445)
T ss_dssp ECCSSCEEEEEE--CSSCEE-EEETTSCEEEEEGGGT-----EEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-----
T ss_pred cCCcccEEEEEE--CCCEEE-EEcCCCEEEEEECCCC-----cEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-----
Confidence 344445567777 666554 5556789999998742 2222222 22334555 5665555444432
Q ss_pred eEeeC-ccceeeeeccccceeeeeecc------ccCCCcEEEEEECC-CCCEEEEEEcCCCCceeceEEEEEeCCEEEEe
Q 024436 183 VLSFP-WIGNVLIKLPIDIVKIHSSLV------KLSGNGGMAMRISE-QGNVLEILEEIGRKMWRSISEVEEKDGNLWIG 254 (268)
Q Consensus 183 v~~~~-~~g~~l~~i~~~~~~~~~~~~------~~~~~~~~~~~~~~-~G~~~~~~~~~~g~~~~~~s~~~~~~g~Lyv~ 254 (268)
|..+. .+++.+..+......+.++.. ..... +.+...+. +++.+..+..+.+ ....++.+...+ +++++
T Consensus 301 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~l~s 377 (445)
T 2ovr_B 301 IRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNAD-STVKIWDIKTGQCLQTLQGPNK-HQSAVTCLQFNK-NFVIT 377 (445)
T ss_dssp EEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETT-SCEEEEETTTCCEEEEECSTTS-CSSCEEEEEECS-SEEEE
T ss_pred EEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCC-CeEEEEECCCCcEEEEEccCCC-CCCCEEEEEECC-CEEEE
Confidence 33332 345555444322111111100 00111 23444444 4666666654321 123344555544 44445
Q ss_pred eCCCCeEEEEeCC
Q 024436 255 SVNMPYAGLYNYS 267 (268)
Q Consensus 255 s~~~~~v~~~~~~ 267 (268)
+..+..|.+.+++
T Consensus 378 ~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 378 SSDDGTVKLWDLK 390 (445)
T ss_dssp EETTSEEEEEETT
T ss_pred EeCCCeEEEEECC
Confidence 5566778877765
No 309
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=95.34 E-value=0.47 Score=41.52 Aligned_cols=123 Identities=13% Similarity=0.038 Sum_probs=63.0
Q ss_pred CcceEEEC-CCCCEEEEEeCCCeEEEEeCCCCe-EEEEEEcCCCCCeeEEEeecCCcceEEEEeCCCCeEEEeecCCCCc
Q 024436 35 GPESLAFD-ALGEGPYTGVSDGRIIKWHQDQRR-WLHFARTSPNRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSFP 112 (268)
Q Consensus 35 ~P~gia~~-~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p 112 (268)
.-..+++. +||+.+++...++.+..++..... ...+. ...+.+..+... ...+... .....
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~---------------~~~~~~~~~~~~-~~~~~~~-~~~~~ 318 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEIS---------------DSTMKLGPKNLL-PNVQGIS-LFPSL 318 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC----------------------------------CCS-CSEEEEC-SSCCS
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEe---------------eecCccccEEEc-ccccccc-ccCcc
Confidence 34456654 788888888888888888754321 11110 011122211111 1111111 22233
Q ss_pred ceEEEcc-CCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCC
Q 024436 113 NGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRR 176 (268)
Q Consensus 113 nGia~sp-dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~ 176 (268)
.+..+.| .++.+.++.+..++|+.|+...+.. .............++++|||+++++....+
T Consensus 319 ~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~--~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAHSQHGLIQLINTYEKDS--NSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp SCCEECSSCTTEEEEEETTTTEEEEEETTCTTC--CEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred eeEEEccCCCCEEEEEECCCCEEEEEECCCCcE--EEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 3444554 3445666777789999999875432 222222223356899999999877665554
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.62 E-value=0.42 Score=39.29 Aligned_cols=138 Identities=13% Similarity=0.045 Sum_probs=75.5
Q ss_pred EEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCC-C--eE----EEEEE----------cCCCCCeeEEEeecC
Q 024436 25 VVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQ-R--RW----LHFAR----------TSPNRNHISVILSGD 87 (268)
Q Consensus 25 ~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~--~~----~~~~~----------~~~~~~~~~~~~~~~ 87 (268)
...+..+++.+...+|++|+|.+|.+ .+|.++++++.. . .| +.+.. ..+++ .++..
T Consensus 32 a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G-~LYav---- 104 (236)
T 1tl2_A 32 ATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNG-YLYAV---- 104 (236)
T ss_dssp SEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTS-CEEEE----
T ss_pred ccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCC-CEEEe----
Confidence 44566656778899999999996666 789999998743 1 11 11110 01111 12222
Q ss_pred CcceEEEEeCCC-Ce------EEEeec-CCCCcceEEEccCCCEEEEEecCCcEEEEEEcc-CCC---CCceeEEEe-CC
Q 024436 88 KTGRLMKYDPAT-KQ------VTVLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLK-TSK---AGTIEIVAQ-LP 154 (268)
Q Consensus 88 ~~g~v~~~d~~~-~~------~~~~~~-~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~-~~~---~g~~~~~~~-l~ 154 (268)
.+|.|||+++-+ +. -+.+-+ +-..-.-|.++|||. ||... .+++++-..- +.. +.....+.+ .-
T Consensus 105 ~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~ 181 (236)
T 1tl2_A 105 SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGW 181 (236)
T ss_dssp ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSG
T ss_pred CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCCcccccccceeccCCc
Confidence 338888888732 11 112211 222236799999995 99887 5667663321 110 111122221 00
Q ss_pred CCCCceEEcCCCCEEEEE
Q 024436 155 GFPDNIKRSPRGGFWVGI 172 (268)
Q Consensus 155 g~Pdgia~d~dG~l~va~ 172 (268)
..=.=+.++++|+||.+.
T Consensus 182 ~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 182 DTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp GGEEEEEECTTSCEEEEE
T ss_pred ceEEEEEECCCCcEEEEe
Confidence 011125688888888877
No 311
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.42 E-value=0.4 Score=44.79 Aligned_cols=128 Identities=12% Similarity=0.063 Sum_probs=78.1
Q ss_pred CCEEEEecCCCCCcceEEECCCCCEEEEEe-CCCeEEEEeCCCCeEEEEEEcCCCCCeeEEEeecCCcceEEEEeCCCCe
Q 024436 23 QGVVQYQIEGAIGPESLAFDALGEGPYTGV-SDGRIIKWHQDQRRWLHFARTSPNRNHISVILSGDKTGRLMKYDPATKQ 101 (268)
Q Consensus 23 ~~~~~i~~~~~~~P~gia~~~dG~~l~~~~-~~g~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 101 (268)
+....||+|. .|+|+-++|||+.+++.. .+.++..++-+.- .+.+.+ . .++++ ..
T Consensus 314 ~~~~~iP~pk--sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~---------------~~~~~~----k--~~~~~-~~ 369 (638)
T 3sbq_A 314 KFTRYVPVPK--NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKL---------------PDLFAG----K--LADPR-DV 369 (638)
T ss_dssp SSEEEEEESS--SCCCEEECTTSCEEEEECTTSSBEEEEEGGGH---------------HHHHTT----C--CSCGG-GG
T ss_pred ceEEEEeCCC--CCcceeeCCCCCEEEEcCCCCCeEEEEEeehh---------------hhhhhc----c--ccCcc-cc
Confidence 4778899997 999999999999777643 2445543332210 000010 1 11333 22
Q ss_pred EEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCC---CCCc--eeEEEeC-----CC---CCCceEEcCCCCE
Q 024436 102 VTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS---KAGT--IEIVAQL-----PG---FPDNIKRSPRGGF 168 (268)
Q Consensus 102 ~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~---~~g~--~~~~~~l-----~g---~Pdgia~d~dG~l 168 (268)
+....+....|-..+|+++| ..|.+-.-...|.+|+++.. ..|+ ..++..+ || .+.|=..++||+.
T Consensus 370 ~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~ 448 (638)
T 3sbq_A 370 IVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKW 448 (638)
T ss_dssp EEECCBCCSCEEEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCE
T ss_pred eEeeccCCCcccEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccE
Confidence 22222334568899999999 79999999999999999731 0111 1222222 22 2445566899999
Q ss_pred EEEEecC
Q 024436 169 WVGIHSR 175 (268)
Q Consensus 169 ~va~~~~ 175 (268)
+++....
T Consensus 449 lv~lnK~ 455 (638)
T 3sbq_A 449 LVALSKF 455 (638)
T ss_dssp EEEEESC
T ss_pred EEEeccc
Confidence 9988754
No 312
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.31 E-value=2.5 Score=37.03 Aligned_cols=146 Identities=18% Similarity=0.167 Sum_probs=78.2
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEEcC-------CCCCeeEEEeecCCcceEEEEeCCCCeE----
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQ-RRWLHFARTS-------PNRNHISVILSGDKTGRLMKYDPATKQV---- 102 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g-~~~~~~~~~~-------~~~~~~~~~~~~~~~g~v~~~d~~~~~~---- 102 (268)
...++++ ++++++++..+|.|..++... +....+.... -...+ +..+..++.|..+|..+++.
T Consensus 175 ~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~---l~s~s~dg~i~vwd~~~~~~~~~~ 249 (435)
T 1p22_A 175 SVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVWDMASPTDITLR 249 (435)
T ss_dssp CEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTE---EEEEETTSCEEEEECSSSSCCEEE
T ss_pred cEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCE---EEEeeCCCcEEEEeCCCCCCceee
Confidence 3445554 888999999999999998753 3222221100 00111 22334567788888765542
Q ss_pred EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEecCCCcceee
Q 024436 103 TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGISKL 182 (268)
Q Consensus 103 ~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~~~~~~~~~~ 182 (268)
..+.......+.+++ +++.|+ +.+..+.|..|++..+.. ...+..-.+....+++ +++++++....+.
T Consensus 250 ~~~~~~~~~v~~~~~--~~~~l~-s~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~----- 317 (435)
T 1p22_A 250 RVLVGHRAAVNVVDF--DDKYIV-SASGDRTIKVWNTSTCEF--VRTLNGHKRGIACLQY--RDRLVVSGSSDNT----- 317 (435)
T ss_dssp EEECCCSSCEEEEEE--ETTEEE-EEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEE--ETTEEEEEETTSC-----
T ss_pred eEecCCCCcEEEEEe--CCCEEE-EEeCCCeEEEEECCcCcE--EEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-----
Confidence 223333344566777 666665 445678999999875321 2222211122334445 4566555554442
Q ss_pred eEeeC-ccceeeeecc
Q 024436 183 VLSFP-WIGNVLIKLP 197 (268)
Q Consensus 183 v~~~~-~~g~~l~~i~ 197 (268)
|..+. .+++.+..+.
T Consensus 318 i~iwd~~~~~~~~~~~ 333 (435)
T 1p22_A 318 IRLWDIECGACLRVLE 333 (435)
T ss_dssp EEEEETTTCCEEEEEC
T ss_pred EEEEECCCCCEEEEEe
Confidence 44443 4466555554
No 313
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.29 E-value=4.4 Score=38.46 Aligned_cols=83 Identities=20% Similarity=0.281 Sum_probs=51.8
Q ss_pred cceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCC--CCCceEEcCCC
Q 024436 89 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPG--FPDNIKRSPRG 166 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g--~Pdgia~d~dG 166 (268)
.|.|..+|+.||++.--.......++..+..+|+.+|+. +..+.++.||...++. .-.+ .++. .-.-+....+|
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~--lw~~-~~~~~~~~~p~~y~~~G 531 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEK--LWEA-PTGTGVVAAPSTYMVDG 531 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCE--EEEE-ECSSCCCSCCEEEEETT
T ss_pred ccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCce--eeee-eCCCCcccCCEEEEeCC
Confidence 388999999988764332222234677777788888887 6789999999875321 1112 2321 11224445788
Q ss_pred CEEEEEecC
Q 024436 167 GFWVGIHSR 175 (268)
Q Consensus 167 ~l~va~~~~ 175 (268)
+.|++...+
T Consensus 532 ~~~v~~~~G 540 (677)
T 1kb0_A 532 RQYVSVAVG 540 (677)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 888876433
No 314
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.33 E-value=0.35 Score=42.28 Aligned_cols=145 Identities=16% Similarity=0.086 Sum_probs=59.0
Q ss_pred EECCCCCEEEEEeCCCeEEEEeC-CCCeEEEEEE-------cCCCCCeeEEEeecCCcceEEEEeCCCCeEEEeecCCCC
Q 024436 40 AFDALGEGPYTGVSDGRIIKWHQ-DQRRWLHFAR-------TSPNRNHISVILSGDKTGRLMKYDPATKQVTVLLGNLSF 111 (268)
Q Consensus 40 a~~~dG~~l~~~~~~g~I~~~~~-~g~~~~~~~~-------~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~ 111 (268)
.+..+|.+++++..++.|+.++. +|+..-.+.. .++--..-..++.+...+.|+.+|+++|+..-... .
T Consensus 44 p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~---~ 120 (369)
T 2hz6_A 44 PTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLS---S 120 (369)
T ss_dssp C-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC-------------
T ss_pred ceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEec---C
Confidence 34567776776678899999987 4542111110 01100000112233346789999999887542221 1
Q ss_pred cceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcC----CCCEEEEEecCCCcceeeeEee-
Q 024436 112 PNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSP----RGGFWVGIHSRRKGISKLVLSF- 186 (268)
Q Consensus 112 pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~----dG~l~va~~~~~~~~~~~v~~~- 186 (268)
+....++|+++.||++. ..+.|+.|+.++++.--...+... ...+++. ++.+|++...+. +..+
T Consensus 121 ~~~~~~~p~~~~v~~~~-~dg~v~a~d~~tG~~~W~~~~~~~----~~~~~~~~~~~~~~v~~~~~dg~------v~a~d 189 (369)
T 2hz6_A 121 AFADSLSPSTSLLYLGR-TEYTITMYDTKTRELRWNATYFDY----AASLPEDDVDYKMSHFVSNGDGL------VVTVD 189 (369)
T ss_dssp ------------EEEEE-EEEEEECCCSSSSSCCCEEEEEEE----CCBCCCCCTTCCCCEEEEETSCE------EEEEC
T ss_pred CCcccccccCCEEEEEe-cCCEEEEEECCCCCEEEeEecccc----cCccccCCccccceEEEECCCCE------EEEEE
Confidence 22355677888888764 457899998865432111111111 1223333 367888766543 4344
Q ss_pred Cccceeeeeccc
Q 024436 187 PWIGNVLIKLPI 198 (268)
Q Consensus 187 ~~~g~~l~~i~~ 198 (268)
..+|+.+.+...
T Consensus 190 ~~tG~~~W~~~~ 201 (369)
T 2hz6_A 190 SESGDVLWIQNY 201 (369)
T ss_dssp TTTCCEEEEEEC
T ss_pred CCCCcEEEEecC
Confidence 457877765543
No 315
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.17 E-value=7.3 Score=36.11 Aligned_cols=85 Identities=16% Similarity=0.092 Sum_probs=49.2
Q ss_pred CcceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCC--ceEEcCC
Q 024436 88 KTGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPD--NIKRSPR 165 (268)
Q Consensus 88 ~~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pd--gia~d~d 165 (268)
..|.|+.+|+.+|++.--........+..+...+..+|+. +..+.|+.+|.++++. .-.+ .++.... -+....+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g-~~dg~l~a~D~~tG~~--lw~~-~~~~~~~~~p~~~~~~ 517 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYA-TLDGYLKALDNKDGKE--LWNF-KMPSGGIGSPMTYSFK 517 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEE-CTTSEEEEEETTTCCE--EEEE-ECSSCCCSCCEEEEET
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEE-cCCCeEEEEECCCCCE--EEEE-eCCCCcEeeeEEEEEC
Confidence 4589999999988754322221223344444445578885 5678999999875321 1111 2322122 2333368
Q ss_pred CCEEEEEecCC
Q 024436 166 GGFWVGIHSRR 176 (268)
Q Consensus 166 G~l~va~~~~~ 176 (268)
|++|++...+.
T Consensus 518 G~~yv~~~~G~ 528 (571)
T 2ad6_A 518 GKQYIGSMYGV 528 (571)
T ss_dssp TEEEEEEEECC
T ss_pred CEEEEEEECCC
Confidence 99999887654
No 316
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=91.69 E-value=3.9 Score=36.15 Aligned_cols=102 Identities=9% Similarity=0.082 Sum_probs=64.4
Q ss_pred EEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEEc-------CCCCCeeEEEeecCCcceEEEEeC
Q 024436 26 VQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRR-WLHFART-------SPNRNHISVILSGDKTGRLMKYDP 97 (268)
Q Consensus 26 ~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~-~~~~~~~-------~~~~~~~~~~~~~~~~g~v~~~d~ 97 (268)
..++++. +..+++ |++.++++ .++.|..++..... -...... .+..+. +.....+|.|+.+|.
T Consensus 83 ~~~~lp~---V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~---~av~~~dG~L~v~dl 153 (388)
T 1xip_A 83 WEKEIPD---VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT---LVILNSVNDLSALDL 153 (388)
T ss_dssp EEEECTT---EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE---EEEEETTSEEEEEET
T ss_pred EEeeCCC---eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC---EEEEECCCCEEEEEc
Confidence 4556663 999999 89989888 77899998864321 0111000 001111 222246789999999
Q ss_pred CCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCC
Q 024436 98 ATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTS 142 (268)
Q Consensus 98 ~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~ 142 (268)
+++....+.. ....++|+|+| +++ -..++.+..|++++.
T Consensus 154 ~~~~~~~~~~---~Vs~v~WSpkG--~~v-g~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 154 RTKSTKQLAQ---NVTSFDVTNSQ--LAV-LLKDRSFQSFAWRNG 192 (388)
T ss_dssp TTCCEEEEEE---SEEEEEECSSE--EEE-EETTSCEEEEEEETT
T ss_pred cCCccccccC---CceEEEEcCCc--eEE-EEcCCcEEEEcCCCc
Confidence 8666654432 45689999999 333 345688888888753
No 317
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.45 E-value=0.41 Score=39.34 Aligned_cols=84 Identities=8% Similarity=0.017 Sum_probs=50.1
Q ss_pred CcceEEEEeCCC-------CeEEEeec-CCCCcceEEEccCCCEEEEEecCCcEEEEEEcc--CCC--CCceeEEEeCC-
Q 024436 88 KTGRLMKYDPAT-------KQVTVLLG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLK--TSK--AGTIEIVAQLP- 154 (268)
Q Consensus 88 ~~g~v~~~d~~~-------~~~~~~~~-~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~--~~~--~g~~~~~~~l~- 154 (268)
..|.||++++.+ +.-+.+-. +...-..+.|+|+|. ||++ + +++|+|++.- +.. ++....+.+-.
T Consensus 58 ~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav-~-dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw 134 (236)
T 1tl2_A 58 LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV-S-KDKLYKASPPQSDTDNWIARATEVGSGGW 134 (236)
T ss_dssp ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC-EEEE-E-TTEEEEESCCCSTTCCHHHHSEEEECSSG
T ss_pred eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC-EEEe-C-CCEEEEeCCCcCCCCceeccccEeccCCC
Confidence 456788888755 22222211 222245799999995 9988 3 3899998762 211 12223332210
Q ss_pred CCCCceEEcCCCCEEEEEecC
Q 024436 155 GFPDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 155 g~Pdgia~d~dG~l~va~~~~ 175 (268)
..-+-|.++|+|.||... .+
T Consensus 135 ~~~~~lff~p~G~Lyav~-dg 154 (236)
T 1tl2_A 135 SGFKFLFFHPNGYLYAVH-GQ 154 (236)
T ss_dssp GGEEEEEECTTSCEEEEE-TT
T ss_pred CceEEEEECCCceEEEEe-CC
Confidence 123678999999999988 44
No 318
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=90.47 E-value=4.1 Score=38.00 Aligned_cols=82 Identities=22% Similarity=0.262 Sum_probs=49.0
Q ss_pred CcceEEEEeCCCCeEEE-eecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eCCCC--CCceEEc
Q 024436 88 KTGRLMKYDPATKQVTV-LLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPGF--PDNIKRS 163 (268)
Q Consensus 88 ~~g~v~~~d~~~~~~~~-~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l~g~--Pdgia~d 163 (268)
..|.|+.+|+.+|++.= ...+...-.+.... .|..+|+. +..+.++.||.++++ ..+. +++.. ..-+...
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~g-~~dg~l~A~D~~tG~----~lW~~~~~~g~~a~P~~y~ 537 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT-AGNLVFTG-TGDGYFKAFDAKSGK----ELWKFQTGSGIVSPPITWE 537 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEE-TTTEEEEE-CTTSEEEEEETTTCC----EEEEEECSSCCCSCCEEEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEe-CCCEEEEE-CCCCcEEEEECCCCC----EEEEecCCCCcccCceEEE
Confidence 46899999999887642 12222211233333 34578875 467899999987532 2221 23321 2225666
Q ss_pred CCCCEEEEEecC
Q 024436 164 PRGGFWVGIHSR 175 (268)
Q Consensus 164 ~dG~l~va~~~~ 175 (268)
.+|+.||+...+
T Consensus 538 ~~G~qYv~~~~G 549 (582)
T 1flg_A 538 QDGEQYLGVTVG 549 (582)
T ss_dssp ETTEEEEEEEEC
T ss_pred ECCEEEEEEEcc
Confidence 789999988765
No 319
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.65 E-value=13 Score=34.70 Aligned_cols=49 Identities=10% Similarity=0.022 Sum_probs=33.6
Q ss_pred EEEEEECC-CCCEEEEEEcCCCCceeceEE-EEEeCCEEEEeeCCCCeEEEEeCCC
Q 024436 215 GMAMRISE-QGNVLEILEEIGRKMWRSISE-VEEKDGNLWIGSVNMPYAGLYNYSS 268 (268)
Q Consensus 215 ~~~~~~~~-~G~~~~~~~~~~g~~~~~~s~-~~~~~g~Lyv~s~~~~~v~~~~~~~ 268 (268)
+.+..+|+ +|+++....... +..++ ++..++.||+++. +.++..+|.++
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagg~vf~gt~-dg~l~A~D~~t 503 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERF----AVWGGTMATAGDLVFYGTL-DGYLKARDSDT 503 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESS----CCCSBCEEETTTEEEEECT-TSEEEEEETTT
T ss_pred CeEEEEECCCCCEEeEecCCC----CccCcceEecCCEEEEECC-CCeEEEEECCC
Confidence 78999999 499988875421 22223 4557889999765 56777777654
No 320
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=88.86 E-value=0.27 Score=42.96 Aligned_cols=22 Identities=9% Similarity=0.099 Sum_probs=11.2
Q ss_pred cCCCEEEEEecCCcEEEEEEccC
Q 024436 119 EDGNYILLAETTSCRILRYWLKT 141 (268)
Q Consensus 119 pdg~~lyva~~~~~~I~~~~~~~ 141 (268)
.+|+ +|++.+..+.|+.|+.++
T Consensus 47 ~~g~-~~v~~s~dg~l~a~d~~t 68 (369)
T 2hz6_A 47 VEEP-AFLPDPNDGSLYTLGSKN 68 (369)
T ss_dssp ---C-CEEECTTTCCEEEC----
T ss_pred cCCC-EEEEeCCCCEEEEEECCC
Confidence 4554 667766778888888753
No 321
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=88.71 E-value=17 Score=34.72 Aligned_cols=106 Identities=9% Similarity=-0.013 Sum_probs=60.0
Q ss_pred ceEEEC-CCCCEEE-EEeCCC----eEEEEeCCCC-e-----EEEE---EEcCCCCCeeEEEeecC-C-cceEEEEeCCC
Q 024436 37 ESLAFD-ALGEGPY-TGVSDG----RIIKWHQDQR-R-----WLHF---ARTSPNRNHISVILSGD-K-TGRLMKYDPAT 99 (268)
Q Consensus 37 ~gia~~-~dG~~l~-~~~~~g----~I~~~~~~g~-~-----~~~~---~~~~~~~~~~~~~~~~~-~-~g~v~~~d~~~ 99 (268)
.+.+++ |||+.++ +...+| +|+.++.++. . +... ..-++++..+.-..... . ...||+++.++
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt 256 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGK 256 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTS
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCC
Confidence 457899 9999654 433333 4888887654 2 1111 01134443222111111 1 24799998876
Q ss_pred CeE--EEee--cCCCCcceEEEccCCCEEEEEec--CCcEEEEEEccCC
Q 024436 100 KQV--TVLL--GNLSFPNGVALSEDGNYILLAET--TSCRILRYWLKTS 142 (268)
Q Consensus 100 ~~~--~~~~--~~~~~pnGia~spdg~~lyva~~--~~~~I~~~~~~~~ 142 (268)
+.. +.+. ..-.+-.++.+||||++|+++.. ....|+.++++++
T Consensus 257 ~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 257 LQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp CGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 532 2232 22234457899999999887653 3468999998753
No 322
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=85.41 E-value=12 Score=35.11 Aligned_cols=82 Identities=12% Similarity=0.038 Sum_probs=48.5
Q ss_pred EEEEeCCCCeEEEeecCCCCcceEEEcc-CCCEEEEEecC-----------CcEEEEEEccCCCCCceeEEEeC-CCCCC
Q 024436 92 LMKYDPATKQVTVLLGNLSFPNGVALSE-DGNYILLAETT-----------SCRILRYWLKTSKAGTIEIVAQL-PGFPD 158 (268)
Q Consensus 92 v~~~d~~~~~~~~~~~~~~~pnGia~sp-dg~~lyva~~~-----------~~~I~~~~~~~~~~g~~~~~~~l-~g~Pd 158 (268)
+..+|+.+++.+.+..--..+...++.+ +| .||+.... ...+++|++....-........- ...-.
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~ 246 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVPAAAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP 246 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCCSEEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC
T ss_pred cccCCCCCCeeeeeccCCCCceeEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc
Confidence 4456777777776654434567889988 66 58887422 12688898875332112211110 11223
Q ss_pred ceEEcCCCCEEEEEec
Q 024436 159 NIKRSPRGGFWVGIHS 174 (268)
Q Consensus 159 gia~d~dG~l~va~~~ 174 (268)
+.++..+|+||+....
T Consensus 247 ~~~~~~~g~lyv~GG~ 262 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGN 262 (656)
T ss_dssp EEEECTTSCEEEECSS
T ss_pred cccCCCCCCEEEeCCC
Confidence 5677789999997653
No 323
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=85.11 E-value=5.3 Score=37.99 Aligned_cols=82 Identities=21% Similarity=0.350 Sum_probs=51.0
Q ss_pred cceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eCC--CCCCceEEcCC
Q 024436 89 TGRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLP--GFPDNIKRSPR 165 (268)
Q Consensus 89 ~g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l~--g~Pdgia~d~d 165 (268)
.|.|..+|+.||++.--.......++-.++..|..+|+. +.++.|+.||.++++ ..+. +++ ....-+....+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~----~lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGE----KLWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC----EEEEEECSSCCCSCCEEEEET
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCc----cceeeeCCCCcccCceEEEEC
Confidence 388999999999764322211112344666667778776 578999999987532 2221 233 12223666678
Q ss_pred CCEEEEEecC
Q 024436 166 GGFWVGIHSR 175 (268)
Q Consensus 166 G~l~va~~~~ 175 (268)
|+.||+...+
T Consensus 529 G~qyv~~~~G 538 (689)
T 1yiq_A 529 GEQYVTFMAG 538 (689)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999987654
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=82.14 E-value=20 Score=29.65 Aligned_cols=101 Identities=14% Similarity=0.096 Sum_probs=57.4
Q ss_pred eEEECCCCCEEEEEeC-----------CCeEEEEeCCCCeEEEEEEcCCCC---------CeeEEEee------cCCcce
Q 024436 38 SLAFDALGEGPYTGVS-----------DGRIIKWHQDQRRWLHFARTSPNR---------NHISVILS------GDKTGR 91 (268)
Q Consensus 38 gia~~~dG~~l~~~~~-----------~g~I~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~------~~~~g~ 91 (268)
.-++..++++++.+-. ...++++++....|.........| ..+..+.. ......
T Consensus 39 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 118 (315)
T 4asc_A 39 VSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDS 118 (315)
T ss_dssp EEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCC
T ss_pred eEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccce
Confidence 3345567887776531 123778898877776654332222 11222211 122357
Q ss_pred EEEEeCCCCeEEEeecCCCCc---ceEEEccCCCEEEEEecC------CcEEEEEEccC
Q 024436 92 LMKYDPATKQVTVLLGNLSFP---NGVALSEDGNYILLAETT------SCRILRYWLKT 141 (268)
Q Consensus 92 v~~~d~~~~~~~~~~~~~~~p---nGia~spdg~~lyva~~~------~~~I~~~~~~~ 141 (268)
++++|+.+.+.+.+.. +..| ...+. -++ .|||.... .+.+++|++..
T Consensus 119 ~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 119 VMCYDRLSFKWGESDP-LPYVVYGHTVLS-HMD-LVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp EEEEETTTTEEEECCC-CSSCCBSCEEEE-ETT-EEEEECCBCTTSCBCCCEEEEETTT
T ss_pred EEEECCCCCcEeECCC-CCCcccceeEEE-ECC-EEEEEeCCCCCCcccceEEEEeCCC
Confidence 9999999888877653 2222 23333 355 58887643 24789999864
No 325
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=79.77 E-value=11 Score=35.51 Aligned_cols=81 Identities=19% Similarity=0.283 Sum_probs=49.2
Q ss_pred ceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEE-eCCC--CCCceEEcCCC
Q 024436 90 GRLMKYDPATKQVTVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVA-QLPG--FPDNIKRSPRG 166 (268)
Q Consensus 90 g~v~~~d~~~~~~~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~-~l~g--~Pdgia~d~dG 166 (268)
|.|+.+|+.||++.=-.......++-.+...|..+|+. +..+.++.|+.+.++ ..+. .++. ...-+....+|
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~----~l~~~~~~~~~~~~p~~~~~~G 512 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADKGE----ALWQFEAQSGIVAAPMTFELAG 512 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC----EEEEEECSSCCCSCCEEEEETT
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhcCh----hheEecCCCCcccCceEEEECC
Confidence 88999999999764222222223455566667788887 577999999987432 1111 2221 11234444678
Q ss_pred CEEEEEecC
Q 024436 167 GFWVGIHSR 175 (268)
Q Consensus 167 ~l~va~~~~ 175 (268)
++|++...+
T Consensus 513 ~~yva~~~G 521 (668)
T 1kv9_A 513 RQYVAIMAG 521 (668)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 888876543
No 326
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=77.88 E-value=25 Score=30.25 Aligned_cols=36 Identities=8% Similarity=0.140 Sum_probs=24.7
Q ss_pred CCcceEEECC--CCCEEEEEeCCC----eEEEEeCCCCeEEEE
Q 024436 34 IGPESLAFDA--LGEGPYTGVSDG----RIIKWHQDQRRWLHF 70 (268)
Q Consensus 34 ~~P~gia~~~--dG~~l~~~~~~g----~I~~~~~~g~~~~~~ 70 (268)
...++|+++| ++. +|++...| .|++....|+.|...
T Consensus 55 ~~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s~D~G~tW~~~ 96 (394)
T 3b7f_A 55 HTIHHIVQDPREPER-MLMAARTGHLGPTVFRSDDGGGNWTEA 96 (394)
T ss_dssp SEEEEEEECSSSTTC-EEEEEEC--CCEEEEEESSTTSCCEEC
T ss_pred CceEEEEECCCCCCe-EEEEecCCCCCccEEEeCCCCCCceEC
Confidence 4578999999 666 55555555 788877777766654
No 327
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=77.74 E-value=28 Score=32.47 Aligned_cols=109 Identities=14% Similarity=0.092 Sum_probs=65.4
Q ss_pred EecCCCCCcceEEECC-CCCEEEEEeCC-----------CeEEEEeCCCCeEEEEEEcCCCC------------CeeEEE
Q 024436 28 YQIEGAIGPESLAFDA-LGEGPYTGVSD-----------GRIIKWHQDQRRWLHFARTSPNR------------NHISVI 83 (268)
Q Consensus 28 i~~~~~~~P~gia~~~-dG~~l~~~~~~-----------g~I~~~~~~g~~~~~~~~~~~~~------------~~~~~~ 83 (268)
.++|. .+.+.++.+ +|++|+.+-.+ ..+.++++....|.........+ ..+..+
T Consensus 182 ~~~P~--~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~ 259 (656)
T 1k3i_A 182 IDLPI--VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVT 259 (656)
T ss_dssp EECSS--CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEE
T ss_pred ccCCC--CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEe
Confidence 44554 567888888 88877775321 15778888766554433221111 112211
Q ss_pred eecCCcceEEEEeCCCCeEEEeecCCCCc---ceEEEccCCCEEEEEec-CC-----cEEEEEEccC
Q 024436 84 LSGDKTGRLMKYDPATKQVTVLLGNLSFP---NGVALSEDGNYILLAET-TS-----CRILRYWLKT 141 (268)
Q Consensus 84 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~p---nGia~spdg~~lyva~~-~~-----~~I~~~~~~~ 141 (268)
.+.....++++|+.+++.+.+. .+..| ...++.+||+ |||... .. ..+.+|++..
T Consensus 260 -GG~~~~~v~~yd~~t~~W~~~~-~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 260 -GGNDAKKTSLYDSSSDSWIPGP-DMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp -CSSSTTCEEEEEGGGTEEEECC-CCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTT
T ss_pred -CCCCCCceEEecCcCCceeECC-CCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCC
Confidence 2223347999999988887764 23333 3567777886 888755 22 5688898864
No 328
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=71.66 E-value=69 Score=30.25 Aligned_cols=106 Identities=8% Similarity=0.069 Sum_probs=61.4
Q ss_pred ceEEECC-CCCEEEEEeC------CCeEEEEeCCCCeEEEEEEcCCCC----------CeeEEEeecCCcceEEEEeCCC
Q 024436 37 ESLAFDA-LGEGPYTGVS------DGRIIKWHQDQRRWLHFARTSPNR----------NHISVILSGDKTGRLMKYDPAT 99 (268)
Q Consensus 37 ~gia~~~-dG~~l~~~~~------~g~I~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~g~v~~~d~~~ 99 (268)
++.++.+ +|++|+.+-. ...++++++....|.........+ ..++.+......+.+++||+.+
T Consensus 443 hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 443 HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT
T ss_pred eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCC
Confidence 3445544 7776666421 245788898887787664332222 1122221111222799999998
Q ss_pred CeEEEeecC--CCC----cceEEEccCCCEEEEEecC-------CcEEEEEEccCC
Q 024436 100 KQVTVLLGN--LSF----PNGVALSEDGNYILLAETT-------SCRILRYWLKTS 142 (268)
Q Consensus 100 ~~~~~~~~~--~~~----pnGia~spdg~~lyva~~~-------~~~I~~~~~~~~ 142 (268)
.+++.+... +.. ...++++.+.+.|||.... .+.+++|++...
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 888876532 211 2236666663479997643 357999998753
No 329
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=68.24 E-value=52 Score=27.52 Aligned_cols=131 Identities=11% Similarity=0.095 Sum_probs=63.7
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCCCCeeEEEeec--------CCcceEEEEeCC-CCeEEEe
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPNRNHISVILSG--------DKTGRLMKYDPA-TKQVTVL 105 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~g~v~~~d~~-~~~~~~~ 105 (268)
.+.++++.++++++++ ..+|.|+|-...|+.|.......+. . +..+... ...|.+++-+.. ....+.+
T Consensus 123 ~~~~i~~~~~~~~~~~-~~~g~v~~S~DgG~tW~~~~~~~~~-~-~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~ 199 (327)
T 2xbg_A 123 SPRLIKALGNGSAEMI-TNVGAIYRTKDSGKNWQALVQEAIG-V-MRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH 199 (327)
T ss_dssp CEEEEEEEETTEEEEE-ETTCCEEEESSTTSSEEEEECSCCC-C-EEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE
T ss_pred CeEEEEEECCCCEEEE-eCCccEEEEcCCCCCCEEeecCCCc-c-eEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC
Confidence 3567777777775544 4567787755557777665321111 1 1111110 122344444321 1223332
Q ss_pred ec-CCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeC--CCC-----CCceEEcCCCCEEEEEecC
Q 024436 106 LG-NLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQL--PGF-----PDNIKRSPRGGFWVGIHSR 175 (268)
Q Consensus 106 ~~-~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l--~g~-----Pdgia~d~dG~l~va~~~~ 175 (268)
.. .-.....++++++++ +|++.. .+.+++.+.+++ ..+..+ +.. ...+++++++.+|++...+
T Consensus 200 ~~~~~~~~~~~~~~~~g~-~~~~~~-~G~~~~s~~D~G-----~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g 270 (327)
T 2xbg_A 200 NRTTSRRLHNMGFTPDGR-LWMIVN-GGKIAFSDPDNS-----ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG 270 (327)
T ss_dssp ECCSSSCEEEEEECTTSC-EEEEET-TTEEEEEETTEE-----EEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT
T ss_pred CCCCCCccceeEECCCCC-EEEEeC-CceEEEecCCCC-----CeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC
Confidence 21 112345788888886 666543 466666544421 222221 111 1245567777888876543
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=65.31 E-value=55 Score=26.69 Aligned_cols=97 Identities=13% Similarity=0.015 Sum_probs=56.5
Q ss_pred CCCCCEEEEEe----CCCeEEEEeCCCCeEEEEEEcCCCCC---------eeEEEee----cCCcceEEEEeCCCCeEEE
Q 024436 42 DALGEGPYTGV----SDGRIIKWHQDQRRWLHFARTSPNRN---------HISVILS----GDKTGRLMKYDPATKQVTV 104 (268)
Q Consensus 42 ~~dG~~l~~~~----~~g~I~~~~~~g~~~~~~~~~~~~~~---------~~~~~~~----~~~~g~v~~~d~~~~~~~~ 104 (268)
.-++.+|+.+- ....++++++....|.........+. .+..+.. ......++++|+.+.+.+.
T Consensus 53 ~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 53 FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 34666665543 23678889998887877654433321 1222211 1123569999999888877
Q ss_pred eecCCCCc---ceEEEccCCCEEEEEecC---------CcEEEEEEccC
Q 024436 105 LLGNLSFP---NGVALSEDGNYILLAETT---------SCRILRYWLKT 141 (268)
Q Consensus 105 ~~~~~~~p---nGia~spdg~~lyva~~~---------~~~I~~~~~~~ 141 (268)
+.. +..| ...+.. ++ .||+.... .+.+++|++..
T Consensus 133 ~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 133 KPS-MLTQRCSHGMVEA-NG-LIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp ECC-CSSCCBSCEEEEE-TT-EEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCC-CcCCcceeEEEEE-CC-EEEEECCCCCCCCcccccceEEEeCCCC
Confidence 642 2222 233333 55 68886531 46689999874
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=60.13 E-value=75 Score=26.52 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=49.7
Q ss_pred eEEECCCCCEEEEE-eCCCeEEEEeCCC--CeEEEEEEcC-CCCC---------eeEEEeec--------CCcceEEEEe
Q 024436 38 SLAFDALGEGPYTG-VSDGRIIKWHQDQ--RRWLHFARTS-PNRN---------HISVILSG--------DKTGRLMKYD 96 (268)
Q Consensus 38 gia~~~dG~~l~~~-~~~g~I~~~~~~g--~~~~~~~~~~-~~~~---------~~~~~~~~--------~~~g~v~~~d 96 (268)
+.++.-++++|+.+ .....+++++++. ..|....... ..|. .++.+... .....++++|
T Consensus 13 ~~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd 92 (357)
T 2uvk_A 13 GTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYN 92 (357)
T ss_dssp CEEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEE
T ss_pred eEEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEe
Confidence 34444477766654 3356899999863 5577665433 2331 12222110 0134689999
Q ss_pred CCCCeEEEeecCCCCc--c-eEEEccCCCEEEEEec
Q 024436 97 PATKQVTVLLGNLSFP--N-GVALSEDGNYILLAET 129 (268)
Q Consensus 97 ~~~~~~~~~~~~~~~p--n-Gia~spdg~~lyva~~ 129 (268)
+.+.+.+.+......| . ..+. -++ .|||...
T Consensus 93 ~~~~~W~~~~~~~p~~r~~~~~~~-~~~-~iyv~GG 126 (357)
T 2uvk_A 93 PKTNSWVKLMSHAPMGMAGHVTFV-HNG-KAYVTGG 126 (357)
T ss_dssp TTTTEEEECSCCCSSCCSSEEEEE-ETT-EEEEEEC
T ss_pred CCCCcEEECCCCCCcccccceEEE-ECC-EEEEEeC
Confidence 9988888765432122 1 2333 455 5888764
No 332
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=50.86 E-value=43 Score=28.80 Aligned_cols=31 Identities=6% Similarity=-0.033 Sum_probs=19.6
Q ss_pred CCCCEEEEEecCCCcceeeeEeeCccceeeeecccc
Q 024436 164 PRGGFWVGIHSRRKGISKLVLSFPWIGNVLIKLPID 199 (268)
Q Consensus 164 ~dG~l~va~~~~~~~~~~~v~~~~~~g~~l~~i~~~ 199 (268)
.+|.+|++...++. .+....+|+++......
T Consensus 110 ~~g~Vy~Gs~~g~l-----~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 110 EDEKVYTGSMRTIM-----YTINMLNGEIISAFGPG 140 (339)
T ss_dssp CCEEEEECEEEEEE-----EEEETTTCCEEEEESTT
T ss_pred cCCEEEEEecCCEE-----EEEECCCCcEEEEEecC
Confidence 56778888777642 34455677777666543
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=50.13 E-value=1e+02 Score=25.00 Aligned_cols=126 Identities=18% Similarity=0.102 Sum_probs=67.0
Q ss_pred CCCCCEEEEEeC------CCeEEEEeCCCCeEEEEEEcCCCCC---------eeEEEe--ecC-C----cceEEEEeCCC
Q 024436 42 DALGEGPYTGVS------DGRIIKWHQDQRRWLHFARTSPNRN---------HISVIL--SGD-K----TGRLMKYDPAT 99 (268)
Q Consensus 42 ~~dG~~l~~~~~------~g~I~~~~~~g~~~~~~~~~~~~~~---------~~~~~~--~~~-~----~g~v~~~d~~~ 99 (268)
.-++++|+.+-. ...++++++....|.........+. .++.+. ... . ...++++|+.+
T Consensus 99 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 99 AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 336776665421 2568889988887877644322221 122111 111 1 45699999998
Q ss_pred CeEEEeecCCCCc---ceEEEccCCCEEEEEecC-----CcEEEEEEccCCCCCceeEEEeCCC--CCCceEEcCCCCEE
Q 024436 100 KQVTVLLGNLSFP---NGVALSEDGNYILLAETT-----SCRILRYWLKTSKAGTIEIVAQLPG--FPDNIKRSPRGGFW 169 (268)
Q Consensus 100 ~~~~~~~~~~~~p---nGia~spdg~~lyva~~~-----~~~I~~~~~~~~~~g~~~~~~~l~g--~Pdgia~d~dG~l~ 169 (268)
.+.+.+.. +..| ..++.. ++ .||+.... .+.+++|++... ....+..+|. .-..+++- ++++|
T Consensus 179 ~~W~~~~~-~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~-~~~i~ 251 (306)
T 3ii7_A 179 ETWTELCP-MIEARKNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYDIKLN---EWKMVSPMPWKGVTVKCAAV-GSIVY 251 (306)
T ss_dssp TEEEEECC-CSSCCBSCEEEEE-TT-EEEEECCEETTEEBCCEEEEETTTT---EEEECCCCSCCBSCCEEEEE-TTEEE
T ss_pred CeEEECCC-ccchhhcceEEEE-CC-EEEEEeCCCCCCCCceEEEeeCCCC---cEEECCCCCCCccceeEEEE-CCEEE
Confidence 88887652 2222 234444 44 58887432 246899998742 2233222321 11223332 56787
Q ss_pred EEEec
Q 024436 170 VGIHS 174 (268)
Q Consensus 170 va~~~ 174 (268)
+....
T Consensus 252 v~GG~ 256 (306)
T 3ii7_A 252 VLAGF 256 (306)
T ss_dssp EEECB
T ss_pred EEeCc
Confidence 76543
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=50.09 E-value=1e+02 Score=25.15 Aligned_cols=96 Identities=20% Similarity=0.242 Sum_probs=54.2
Q ss_pred CCCCEEEEEeCC-------CeEEEEeCCCCeEEEEEEcCCCC---------CeeEEEee----cCCcceEEEEeCCCCeE
Q 024436 43 ALGEGPYTGVSD-------GRIIKWHQDQRRWLHFARTSPNR---------NHISVILS----GDKTGRLMKYDPATKQV 102 (268)
Q Consensus 43 ~dG~~l~~~~~~-------g~I~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~----~~~~g~v~~~d~~~~~~ 102 (268)
-++++|+.+-.+ ..++++++....|.........+ ..+..+.. ......++++|+.+.+.
T Consensus 108 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 108 VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 367766664321 45778888877787764332221 11222210 11235699999998888
Q ss_pred EEeecCCCCc---ceEEEccCCCEEEEEecC-----CcEEEEEEccC
Q 024436 103 TVLLGNLSFP---NGVALSEDGNYILLAETT-----SCRILRYWLKT 141 (268)
Q Consensus 103 ~~~~~~~~~p---nGia~spdg~~lyva~~~-----~~~I~~~~~~~ 141 (268)
+.+.. +..| .+.+.. ++ .|||.... .+.+++|+++.
T Consensus 188 ~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 188 KDLAP-MKTPRSMFGVAIH-KG-KIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEECC-CSSCCBSCEEEEE-TT-EEEEEEEEETTEEEEEEEEEETTT
T ss_pred EECCC-CCCCcccceEEEE-CC-EEEEEcCcCCCCccceEEEEECCC
Confidence 87642 2222 234443 45 68887532 24788898864
No 335
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=48.30 E-value=1.2e+02 Score=25.24 Aligned_cols=145 Identities=12% Similarity=0.120 Sum_probs=74.1
Q ss_pred CEEEEecCCCCCcceEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEEcCCC-CCeeEEEeec-------CCcceEEEE
Q 024436 24 GVVQYQIEGAIGPESLAFDALGEGPYTGVSDGRIIKWHQDQRRWLHFARTSPN-RNHISVILSG-------DKTGRLMKY 95 (268)
Q Consensus 24 ~~~~i~~~~~~~P~gia~~~dG~~l~~~~~~g~I~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~-------~~~g~v~~~ 95 (268)
.=+.+..+......+|++.+++..++++ ..|.|++-...|+.|.......+. ...+..+... ...+.|++-
T Consensus 26 ~W~~~~~~~~~~~~~v~~~~~~~~~~~G-~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~S 104 (327)
T 2xbg_A 26 PWEAIQLPTTATILDMSFIDRHHGWLVG-VNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHT 104 (327)
T ss_dssp CEEEEECSCSSCEEEEEESSSSCEEEEE-TTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEEE
T ss_pred CceEeecCCCCcEEEEEECCCCcEEEEc-CCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEEE
Confidence 3445555554568889998888867654 567888765556666654321111 1111111111 112445553
Q ss_pred eCCCCeEEEeecC--C-CCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEe-CCCCCCceEEcCCCCEEEE
Q 024436 96 DPATKQVTVLLGN--L-SFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQ-LPGFPDNIKRSPRGGFWVG 171 (268)
Q Consensus 96 d~~~~~~~~~~~~--~-~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~-l~g~Pdgia~d~dG~l~va 171 (268)
+-.....+.+... + ..+++|++.+++ .+|++.. .+.|++ ..|++. +.+.... .++...+++++++|.+|+.
T Consensus 105 ~DgG~tW~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~-~g~v~~-S~DgG~--tW~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (327)
T 2xbg_A 105 TDGGQSWSQIPLDPKLPGSPRLIKALGNG-SAEMITN-VGAIYR-TKDSGK--NWQALVQEAIGVMRNLNRSPSGEYVAV 179 (327)
T ss_dssp SSTTSSCEECCCCTTCSSCEEEEEEEETT-EEEEEET-TCCEEE-ESSTTS--SEEEEECSCCCCEEEEEECTTSCEEEE
T ss_pred CCCCCCceECccccCCCCCeEEEEEECCC-CEEEEeC-CccEEE-EcCCCC--CCEEeecCCCcceEEEEEcCCCcEEEE
Confidence 3222233443321 1 235678888777 4776653 455655 344332 1232222 2233456778888887765
Q ss_pred Eec
Q 024436 172 IHS 174 (268)
Q Consensus 172 ~~~ 174 (268)
...
T Consensus 180 g~~ 182 (327)
T 2xbg_A 180 SSR 182 (327)
T ss_dssp ETT
T ss_pred ECC
Confidence 533
No 336
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=48.20 E-value=44 Score=29.14 Aligned_cols=74 Identities=9% Similarity=0.081 Sum_probs=46.0
Q ss_pred ccCCCEEEEEecCCc--EEEEEEccCCCCCceeEEEe-CC---CCCC-ceEEcCCCCEEEEEecCCCcceeeeEeeCccc
Q 024436 118 SEDGNYILLAETTSC--RILRYWLKTSKAGTIEIVAQ-LP---GFPD-NIKRSPRGGFWVGIHSRRKGISKLVLSFPWIG 190 (268)
Q Consensus 118 spdg~~lyva~~~~~--~I~~~~~~~~~~g~~~~~~~-l~---g~Pd-gia~d~dG~l~va~~~~~~~~~~~v~~~~~~g 190 (268)
+++.++||.-+...+ .|..++++..++-..-.+.. .| +.+. ++-+-.+..+|+..+.... |..+...|
T Consensus 36 ~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~-----i~l~n~~G 110 (369)
T 3s9j_A 36 ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISR-----LSSINSQG 110 (369)
T ss_dssp ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTE-----EEEECTTC
T ss_pred cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcce-----EEEECCCc
Confidence 455568888888888 99999998643211111211 22 2343 3545567789998876543 55566777
Q ss_pred eeeeec
Q 024436 191 NVLIKL 196 (268)
Q Consensus 191 ~~l~~i 196 (268)
+++.++
T Consensus 111 ~~~~k~ 116 (369)
T 3s9j_A 111 EIIRNY 116 (369)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 776665
No 337
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=48.09 E-value=1.3e+02 Score=25.61 Aligned_cols=34 Identities=21% Similarity=0.398 Sum_probs=22.9
Q ss_pred ceEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEE
Q 024436 37 ESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHF 70 (268)
Q Consensus 37 ~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~~~~~ 70 (268)
..|+++|. .+.+|++...+.|++-...|+.|...
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~ 214 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPL 214 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEESSTTSSCEEC
T ss_pred eEEEECCCCCCEEEEEECCCCEEEECCCCCCceEC
Confidence 47888873 33366666667788877777767654
No 338
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=46.15 E-value=1.2e+02 Score=24.51 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=54.9
Q ss_pred ECCCCCEEEEEeC-----CCeEEEEeCCCCe---EEEEEEcCCCCC---------eeEEEee---cCCcceEEEEeCCCC
Q 024436 41 FDALGEGPYTGVS-----DGRIIKWHQDQRR---WLHFARTSPNRN---------HISVILS---GDKTGRLMKYDPATK 100 (268)
Q Consensus 41 ~~~dG~~l~~~~~-----~g~I~~~~~~g~~---~~~~~~~~~~~~---------~~~~~~~---~~~~g~v~~~d~~~~ 100 (268)
+..++++++.+-. ...++++++.... |.........+. .+..+.. ......++++|+.+.
T Consensus 59 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 59 VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCC
Confidence 3346666655432 2568888887766 776643322221 1222211 112357999999988
Q ss_pred eEEEeecCCCCc---ceEEEccCCCEEEEEecC-----CcEEEEEEccC
Q 024436 101 QVTVLLGNLSFP---NGVALSEDGNYILLAETT-----SCRILRYWLKT 141 (268)
Q Consensus 101 ~~~~~~~~~~~p---nGia~spdg~~lyva~~~-----~~~I~~~~~~~ 141 (268)
+.+.+.. +..| ...+.. ++ .||+.... .+.+++|++..
T Consensus 139 ~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 139 QWSMLGD-MQTAREGAGLVVA-SG-VIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp EEEEEEE-CSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCCEEEEETTT
T ss_pred eEEECCC-CCCCcccceEEEE-CC-EEEEECCCCCCcccceEEEEeCCC
Confidence 8877643 2222 233333 55 58887432 35789999874
No 339
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=45.92 E-value=80 Score=29.31 Aligned_cols=54 Identities=22% Similarity=0.366 Sum_probs=36.7
Q ss_pred CcceEEEEeCCCCeEEEee---cCCCCcceE----EEccCC----CEEEEEecCCcEEEEEEccCC
Q 024436 88 KTGRLMKYDPATKQVTVLL---GNLSFPNGV----ALSEDG----NYILLAETTSCRILRYWLKTS 142 (268)
Q Consensus 88 ~~g~v~~~d~~~~~~~~~~---~~~~~pnGi----a~spdg----~~lyva~~~~~~I~~~~~~~~ 142 (268)
....||.+|.++|++..-+ .....+||+ .++.|+ +++|+.|. .+.|||||+.+.
T Consensus 221 ~~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~ 285 (570)
T 3hx6_A 221 DKAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDL-QGNLWRFDLIAG 285 (570)
T ss_dssp CCEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEET-TSEEEEEECSCS
T ss_pred CccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeC-CCcEEEEEcCCC
Confidence 3468999999988754322 122346665 355454 47999985 589999999753
No 340
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=43.66 E-value=1.6e+02 Score=25.57 Aligned_cols=141 Identities=9% Similarity=0.057 Sum_probs=74.5
Q ss_pred CcceEEECCCCCEEEEEeCCCeEEEEeCC----------C---Ce-------EEEEEEcCCCCCeeEEEeecCCcceEEE
Q 024436 35 GPESLAFDALGEGPYTGVSDGRIIKWHQD----------Q---RR-------WLHFARTSPNRNHISVILSGDKTGRLMK 94 (268)
Q Consensus 35 ~P~gia~~~dG~~l~~~~~~g~I~~~~~~----------g---~~-------~~~~~~~~~~~~~~~~~~~~~~~g~v~~ 94 (268)
..+-+++++...+++++..++-+. ++.+ + .. +...+- +..++... ..+.|..
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v-~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f---d~~~L~v~----~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVV-GELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF---HGDQVLVS----TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEE-EEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE---ETTEEEEE----ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCEEEE-EEhhHhhhhhccccccccceEEeeCCCeeEEEE---CCCEEEEE----cCCcEEE
Confidence 578899999999888887764443 4311 0 00 111111 22222221 3467778
Q ss_pred EeCCCCeE-EEeecCCCCcceEEEccCCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCCCceEEcCCCCEEEEEe
Q 024436 95 YDPATKQV-TVLLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIH 173 (268)
Q Consensus 95 ~d~~~~~~-~~~~~~~~~pnGia~spdg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~Pdgia~d~dG~l~va~~ 173 (268)
||..+... ......-..-+.+.+.+. .+.+. +.++.|++|++..+. ...... ....+++.++| +.++..
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~-~~dG~L~v~dl~~~~---~~~~~~---~Vs~v~WSpkG-~~vg~~ 180 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVIL-NSVNDLSALDLRTKS---TKQLAQ---NVTSFDVTNSQ-LAVLLK 180 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEE-ETTSEEEEEETTTCC---EEEEEE---SEEEEEECSSE-EEEEET
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEE-ECCCCEEEEEccCCc---cccccC---CceEEEEcCCc-eEEEEc
Confidence 87653221 111111111345655544 24444 567999999997532 222222 36689999999 555555
Q ss_pred cCCCcceeeeEeeCcccee---eeecccc
Q 024436 174 SRRKGISKLVLSFPWIGNV---LIKLPID 199 (268)
Q Consensus 174 ~~~~~~~~~v~~~~~~g~~---l~~i~~~ 199 (268)
.+. +..|.+.+.. .+.|+.|
T Consensus 181 dg~------i~~~~~~~~~~~~k~~I~~P 203 (388)
T 1xip_A 181 DRS------FQSFAWRNGEMEKQFEFSLP 203 (388)
T ss_dssp TSC------EEEEEEETTEEEEEEEECCC
T ss_pred CCc------EEEEcCCCccccccceecCC
Confidence 443 5566555443 4556443
No 341
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=41.29 E-value=1.4e+02 Score=24.06 Aligned_cols=95 Identities=12% Similarity=0.100 Sum_probs=54.1
Q ss_pred CCCEEEEEeC-----CCeEEEEeCCCCeEEEEEEcCCCCC---------eeEEEee---cCCcceEEEEeCCCCeEEEee
Q 024436 44 LGEGPYTGVS-----DGRIIKWHQDQRRWLHFARTSPNRN---------HISVILS---GDKTGRLMKYDPATKQVTVLL 106 (268)
Q Consensus 44 dG~~l~~~~~-----~g~I~~~~~~g~~~~~~~~~~~~~~---------~~~~~~~---~~~~g~v~~~d~~~~~~~~~~ 106 (268)
++.+++.+-. ...++++++....|.........+. .+..+.. ......++++|+.+.+.+.+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 6665655321 2468888988777877654332221 1222211 112246899999988887764
Q ss_pred cCCCCc---ceEEEccCCCEEEEEecC-------CcEEEEEEccC
Q 024436 107 GNLSFP---NGVALSEDGNYILLAETT-------SCRILRYWLKT 141 (268)
Q Consensus 107 ~~~~~p---nGia~spdg~~lyva~~~-------~~~I~~~~~~~ 141 (268)
. +..| ...+.. ++ .||+.... .+.+++|++..
T Consensus 141 ~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 141 P-MNTRRSSVGVGVV-GG-LLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp C-CSSCCBSCEEEEE-TT-EEEEECCEETTTTEECCCEEEEETTT
T ss_pred C-CCCcccCceEEEE-CC-EEEEEeCCCCCCCccccEEEEEeCCC
Confidence 2 2222 233333 45 68886431 35688999864
No 342
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=39.89 E-value=1.5e+02 Score=23.88 Aligned_cols=124 Identities=16% Similarity=0.160 Sum_probs=67.2
Q ss_pred CCCCEEEEEeC-----CCeEEEEeCCCCeEEEEEEcCCCCC---------eeEEEeec---CCcceEEEEeCCCCeEEEe
Q 024436 43 ALGEGPYTGVS-----DGRIIKWHQDQRRWLHFARTSPNRN---------HISVILSG---DKTGRLMKYDPATKQVTVL 105 (268)
Q Consensus 43 ~dG~~l~~~~~-----~g~I~~~~~~g~~~~~~~~~~~~~~---------~~~~~~~~---~~~g~v~~~d~~~~~~~~~ 105 (268)
-++++++.+-. ...+.++++....|.........+. .+..+... .....++++|+.+.+.+.+
T Consensus 111 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 190 (301)
T 2vpj_A 111 LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV 190 (301)
T ss_dssp ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE
T ss_pred ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeC
Confidence 36776665421 3568889998888887765433331 12222110 1235789999998888876
Q ss_pred ecCCCCcc---eEEEccCCCEEEEEecC-----CcEEEEEEccCCCCCceeEEEeCCC--CCCceEEcCCCCEEEEEe
Q 024436 106 LGNLSFPN---GVALSEDGNYILLAETT-----SCRILRYWLKTSKAGTIEIVAQLPG--FPDNIKRSPRGGFWVGIH 173 (268)
Q Consensus 106 ~~~~~~pn---Gia~spdg~~lyva~~~-----~~~I~~~~~~~~~~g~~~~~~~l~g--~Pdgia~d~dG~l~va~~ 173 (268)
. .+..|. .++.. ++ .||+.... .+.+++|+++.. ....+..+|. .-..+++- +|++|+...
T Consensus 191 ~-~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG 261 (301)
T 2vpj_A 191 T-PMATKRSGAGVALL-ND-HIYVVGGFDGTAHLSSVEAYNIRTD---SWTTVTSMTTPRCYVGATVL-RGRLYAIAG 261 (301)
T ss_dssp C-CCSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred C-CCCcccccceEEEE-CC-EEEEEeCCCCCcccceEEEEeCCCC---cEEECCCCCCcccceeEEEE-CCEEEEEcC
Confidence 4 233232 33333 44 68887543 357899998742 2333333321 11123332 567777543
No 343
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=38.66 E-value=2.7e+02 Score=26.61 Aligned_cols=132 Identities=15% Similarity=0.070 Sum_probs=0.0
Q ss_pred ceEEECC-CCCEEEEEeCC------CeEEEEeCCCCeEEEEEE----------------cCCCCCeeEEEeecCCcceEE
Q 024436 37 ESLAFDA-LGEGPYTGVSD------GRIIKWHQDQRRWLHFAR----------------TSPNRNHISVILSGDKTGRLM 93 (268)
Q Consensus 37 ~gia~~~-dG~~l~~~~~~------g~I~~~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~g~v~ 93 (268)
..|+++| +.+.+|+...+ +.|++=...|+.|..... ..-....-..++.....+.||
T Consensus 67 ~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~ 146 (789)
T 1sqj_A 67 ESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW 146 (789)
T ss_dssp EEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE
T ss_pred eEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE
Q ss_pred EEeCCCCeEEEeecCC------CCcceEEEcc-CCCEEEEEecCCcEEEEEEccCCCCCceeEEEeCCCCC---------
Q 024436 94 KYDPATKQVTVLLGNL------SFPNGVALSE-DGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFP--------- 157 (268)
Q Consensus 94 ~~d~~~~~~~~~~~~~------~~pnGia~sp-dg~~lyva~~~~~~I~~~~~~~~~~g~~~~~~~l~g~P--------- 157 (268)
+=+-.....+.+.... .....|+++| +++.||++......|++ ..|+++. .+.+..++...
T Consensus 147 ~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~-S~DgG~T--W~~~~~~~~~~~~~~~~~~~ 223 (789)
T 1sqj_A 147 KSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYV-THDGGVS--WEPVAGQPSSWLNRTTGAFP 223 (789)
T ss_dssp EESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEE-ESSTTSS--CEECTTCCCSCCHHHHHTST
T ss_pred EECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEE-EcCCCcC--cccCCCCcCccccccccccC
Q ss_pred ---------CceEEcC-CCCEEEE
Q 024436 158 ---------DNIKRSP-RGGFWVG 171 (268)
Q Consensus 158 ---------dgia~d~-dG~l~va 171 (268)
..+++++ ++.||++
T Consensus 224 ~~~~~~~~~~~~~~~p~~~~l~~~ 247 (789)
T 1sqj_A 224 DKKPASIAPQPMKVALTPNFLYVT 247 (789)
T ss_dssp TCCCSSSSCEEEEEEECSSEEEEE
T ss_pred cccccccccceeEEcCCCCeEEEE
No 344
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=38.44 E-value=1.6e+02 Score=23.90 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=54.8
Q ss_pred CCCCEEEEEe-----CCCeEEEEeCCCCeEEEEEEcCCCC---------CeeEEEee---cCCcceEEEEeCCCCeEEEe
Q 024436 43 ALGEGPYTGV-----SDGRIIKWHQDQRRWLHFARTSPNR---------NHISVILS---GDKTGRLMKYDPATKQVTVL 105 (268)
Q Consensus 43 ~dG~~l~~~~-----~~g~I~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~---~~~~g~v~~~d~~~~~~~~~ 105 (268)
-++++|+.+- ....+.++++....|.........+ ..+..+.. ......++++|+.+.+.+.+
T Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 199 (308)
T 1zgk_A 120 IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMI 199 (308)
T ss_dssp ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEC
T ss_pred ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC
Confidence 3677666532 1356888888877777654332222 11222211 01135789999998888776
Q ss_pred ecCCCCc---ceEEEccCCCEEEEEecC-----CcEEEEEEccC
Q 024436 106 LGNLSFP---NGVALSEDGNYILLAETT-----SCRILRYWLKT 141 (268)
Q Consensus 106 ~~~~~~p---nGia~spdg~~lyva~~~-----~~~I~~~~~~~ 141 (268)
.. +..| ..++.. ++ .||+.... .+.+++|+++.
T Consensus 200 ~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 200 TA-MNTIRSGAGVCVL-HN-CIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp CC-CSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETTT
T ss_pred CC-CCCccccceEEEE-CC-EEEEEeCCCCCCccceEEEEeCCC
Confidence 42 2222 234443 44 68887643 35799999874
No 345
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=37.62 E-value=1.6e+02 Score=23.68 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=65.8
Q ss_pred CCCCEEEEEeCC-----CeEEEEeCCCCeEEEEEEcCCCCC---------eeEEEe--ecC---CcceEEEEeCCCCeEE
Q 024436 43 ALGEGPYTGVSD-----GRIIKWHQDQRRWLHFARTSPNRN---------HISVIL--SGD---KTGRLMKYDPATKQVT 103 (268)
Q Consensus 43 ~dG~~l~~~~~~-----g~I~~~~~~g~~~~~~~~~~~~~~---------~~~~~~--~~~---~~g~v~~~d~~~~~~~ 103 (268)
-++++|+.+-.+ ..+.++++....|.........+. .++.+. ... ....++++|+.+.+.+
T Consensus 107 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 107 LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 467766665321 457788888877877653322221 122211 111 1356899999988888
Q ss_pred EeecCCCCc---ceEEEccCCCEEEEEecC-----CcEEEEEEccCCCCCceeEEEeCCC--CCCceEEcCCCCEEEEEe
Q 024436 104 VLLGNLSFP---NGVALSEDGNYILLAETT-----SCRILRYWLKTSKAGTIEIVAQLPG--FPDNIKRSPRGGFWVGIH 173 (268)
Q Consensus 104 ~~~~~~~~p---nGia~spdg~~lyva~~~-----~~~I~~~~~~~~~~g~~~~~~~l~g--~Pdgia~d~dG~l~va~~ 173 (268)
.+.. +..| ..++.. ++ .||+.... .+.+++|+++.. ....+..++. .-.+++. -+|++|+...
T Consensus 187 ~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG 259 (302)
T 2xn4_A 187 YIAE-MSTRRSGAGVGVL-NN-LLYAVGGHDGPLVRKSVEVYDPTTN---AWRQVADMNMCRRNAGVCA-VNGLLYVVGG 259 (302)
T ss_dssp EECC-CSSCCBSCEEEEE-TT-EEEEECCBSSSSBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEE-ETTEEEEECC
T ss_pred ECCC-CccccccccEEEE-CC-EEEEECCCCCCcccceEEEEeCCCC---CEeeCCCCCCccccCeEEE-ECCEEEEECC
Confidence 7642 2222 233333 44 68887543 357999998742 2333333321 1122333 2567777543
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=35.59 E-value=1.8e+02 Score=23.66 Aligned_cols=128 Identities=14% Similarity=0.183 Sum_probs=67.6
Q ss_pred eEEECCCCCEEEEEeC----CC-------eEEEEeCCCCeEEEEEEcCCCC---------CeeEEEee-----cCCcceE
Q 024436 38 SLAFDALGEGPYTGVS----DG-------RIIKWHQDQRRWLHFARTSPNR---------NHISVILS-----GDKTGRL 92 (268)
Q Consensus 38 gia~~~dG~~l~~~~~----~g-------~I~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~-----~~~~g~v 92 (268)
.-++..++.+++.+-. ++ .++++++....|.........| ..+..+.. ......+
T Consensus 50 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 50 SSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp EEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEE
T ss_pred eEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceE
Confidence 3445667887776531 11 2788898877787654332222 12222211 1123568
Q ss_pred EEEeCCCCeEEEeecCCCCc---ceEEEccCCCEEEEEecC------CcEEEEEEccCCCCCceeEEEeCCC--CCCceE
Q 024436 93 MKYDPATKQVTVLLGNLSFP---NGVALSEDGNYILLAETT------SCRILRYWLKTSKAGTIEIVAQLPG--FPDNIK 161 (268)
Q Consensus 93 ~~~d~~~~~~~~~~~~~~~p---nGia~spdg~~lyva~~~------~~~I~~~~~~~~~~g~~~~~~~l~g--~Pdgia 161 (268)
+++|+.+.+.+.+.. +..| ...+. -++ .||+.... .+.+++|++... ....+..+|. .-..++
T Consensus 130 ~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~ 203 (318)
T 2woz_A 130 LCYDPVAAKWSEVKN-LPIKVYGHNVIS-HNG-MIYCLGGKTDDKKCTNRVFIYNPKKG---DWKDLAPMKTPRSMFGVA 203 (318)
T ss_dssp EEEETTTTEEEEECC-CSSCEESCEEEE-ETT-EEEEECCEESSSCBCCCEEEEETTTT---EEEEECCCSSCCBSCEEE
T ss_pred EEEeCCCCCEeECCC-CCCcccccEEEE-ECC-EEEEEcCCCCCCCccceEEEEcCCCC---EEEECCCCCCCcccceEE
Confidence 999999888887642 2222 23333 455 58886532 346899998742 2333333321 112333
Q ss_pred EcCCCCEEEEE
Q 024436 162 RSPRGGFWVGI 172 (268)
Q Consensus 162 ~d~dG~l~va~ 172 (268)
+ -++++|+..
T Consensus 204 ~-~~~~iyv~G 213 (318)
T 2woz_A 204 I-HKGKIVIAG 213 (318)
T ss_dssp E-ETTEEEEEE
T ss_pred E-ECCEEEEEc
Confidence 3 356777754
No 347
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=31.52 E-value=2.1e+02 Score=23.20 Aligned_cols=86 Identities=10% Similarity=0.068 Sum_probs=47.2
Q ss_pred ECCCCCEEEEEeC------CCeEEEEeCCCCeEEEEEEcCCCCC---------eeEEEeecC---CcceEEEEeCCCCeE
Q 024436 41 FDALGEGPYTGVS------DGRIIKWHQDQRRWLHFARTSPNRN---------HISVILSGD---KTGRLMKYDPATKQV 102 (268)
Q Consensus 41 ~~~dG~~l~~~~~------~g~I~~~~~~g~~~~~~~~~~~~~~---------~~~~~~~~~---~~g~v~~~d~~~~~~ 102 (268)
+.-++++++.+-. ...+.++++....|+........+. .+..+.... ....++++|+++.+.
T Consensus 145 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 145 LSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp EEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred EEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 3356776665422 2568888988877877643322221 122221111 134789999998888
Q ss_pred EEeecCCCCc---ceEEEccCCCEEEEEec
Q 024436 103 TVLLGNLSFP---NGVALSEDGNYILLAET 129 (268)
Q Consensus 103 ~~~~~~~~~p---nGia~spdg~~lyva~~ 129 (268)
+.+.. +..| ..++.. ++ .||+...
T Consensus 225 ~~~~~-~p~~r~~~~~~~~-~~-~l~v~GG 251 (315)
T 4asc_A 225 APFEA-FPQERSSLSLVSL-VG-TLYAIGG 251 (315)
T ss_dssp EEECC-CSSCCBSCEEEEE-TT-EEEEEEE
T ss_pred EECCC-CCCcccceeEEEE-CC-EEEEECC
Confidence 87753 2222 233333 44 5887643
No 348
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=25.44 E-value=2.7e+02 Score=22.46 Aligned_cols=84 Identities=15% Similarity=0.192 Sum_probs=47.7
Q ss_pred CeEEEEeCCCCeEEEEEEcCCCCC---------eeEEEe--e-cCCcceEEEEeCCCCeEEEeecCCCCc---ceEEEcc
Q 024436 55 GRIIKWHQDQRRWLHFARTSPNRN---------HISVIL--S-GDKTGRLMKYDPATKQVTVLLGNLSFP---NGVALSE 119 (268)
Q Consensus 55 g~I~~~~~~g~~~~~~~~~~~~~~---------~~~~~~--~-~~~~g~v~~~d~~~~~~~~~~~~~~~p---nGia~sp 119 (268)
..++++++....|.........+. .+..+. . ......++++|+.+.+.+.+.. +..| ...+..
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~- 167 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP-MLTRRIGVGVAVL- 167 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE-
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCC-CCccccceEEEEE-
Confidence 468888988777776543322221 122111 0 0113468999999888877643 2222 233333
Q ss_pred CCCEEEEEecC-----CcEEEEEEccC
Q 024436 120 DGNYILLAETT-----SCRILRYWLKT 141 (268)
Q Consensus 120 dg~~lyva~~~-----~~~I~~~~~~~ 141 (268)
++ .||+.... .+.+++|++..
T Consensus 168 ~~-~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 168 NR-LLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp TT-EEEEECCBCSSCBCCCEEEEETTT
T ss_pred CC-EEEEEeCCCCCCcCceEEEEeCCC
Confidence 44 68887432 35789999864
No 349
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=24.07 E-value=4.5e+02 Score=24.67 Aligned_cols=46 Identities=15% Similarity=0.297 Sum_probs=32.7
Q ss_pred EEEEecCCCC-CcceEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEE
Q 024436 25 VVQYQIEGAI-GPESLAFDAL-GEGPYTGVSDGRIIKWHQDQRRWLHF 70 (268)
Q Consensus 25 ~~~i~~~~~~-~P~gia~~~d-G~~l~~~~~~g~I~~~~~~g~~~~~~ 70 (268)
-+.+..+... ...+|+++|+ .+.+|+....+.|+|-+..|+.|+.+
T Consensus 13 w~~~~~~~~~g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i 60 (737)
T 2cn3_A 13 WDNVVIGGGGGFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPL 60 (737)
T ss_dssp EEEECCCSBCSCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEEC
T ss_pred eEEcccCCCcceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEEC
Confidence 3444444333 6779999986 35588888788999988888877764
No 350
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=23.00 E-value=4.9e+02 Score=24.63 Aligned_cols=43 Identities=16% Similarity=0.265 Sum_probs=32.9
Q ss_pred ecCCCCCcceEEECCCC-CEEEEEeCCCeEEEEeCCCCeEEEEE
Q 024436 29 QIEGAIGPESLAFDALG-EGPYTGVSDGRIIKWHQDQRRWLHFA 71 (268)
Q Consensus 29 ~~~~~~~P~gia~~~dG-~~l~~~~~~g~I~~~~~~g~~~~~~~ 71 (268)
.++....-.+|+++|.+ +++|++...|.|+|-...|+.|....
T Consensus 16 ~~g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~ 59 (763)
T 3a0f_A 16 TISGGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPIT 59 (763)
T ss_dssp SCCBCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESC
T ss_pred EecCCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECc
Confidence 34444578899999975 67888888899999888888777643
Done!