Your job contains 1 sequence.
>024438
MYHTQQLQQPPSFTYLSNHPTIPNPNPSSYFSYPQPAVHHAEPAIYPPGIDPDADSGSHP
STHVGIENQIPTQYYVDPNAVSVAWVTWQAGSLTYENGSLPSTSLNSSGDSYATSQPLVN
NVTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCN
TINKVSLPSQELEMKRQKLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVIT
LLSSLAFSLIDSHLMLVFLFCFKIALL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024438
(267 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1C2G8 - symbol:ZMAT3 "Uncharacterized protein"... 124 1.6e-05 1
ZFIN|ZDB-GENE-070209-152 - symbol:znf346 "zinc finger pro... 124 1.8e-05 1
UNIPROTKB|Q0IIC4 - symbol:ZMAT3 "Zinc finger matrin-type ... 121 3.6e-05 1
UNIPROTKB|E2R5Y8 - symbol:ZMAT3 "Uncharacterized protein"... 116 0.00014 1
UNIPROTKB|Q8AVN9 - symbol:znf346 "Zinc finger protein 346... 87 0.00022 2
ZFIN|ZDB-GENE-091204-66 - symbol:si:dkey-26l17.1 "si:dkey... 115 0.00042 1
UNIPROTKB|Q9HA38 - symbol:ZMAT3 "Zinc finger matrin-type ... 111 0.00054 1
ZFIN|ZDB-GENE-070705-184 - symbol:zfr2 "zinc finger RNA b... 83 0.00085 2
>UNIPROTKB|E1C2G8 [details] [associations]
symbol:ZMAT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR015880
SMART:SM00355 SMART:SM00451 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR022755 Pfam:PF12171 CTD:64393
GeneTree:ENSGT00510000046606 KO:K10137 OMA:YNPRPRQ
EMBL:AADN02020835 IPI:IPI00593716 RefSeq:XP_423190.2
Ensembl:ENSGALT00000000162 GeneID:425428 KEGG:gga:425428
NextBio:20827483 Uniprot:E1C2G8
Length = 289
Score = 124 (48.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/143 (23%), Positives = 60/143 (41%)
Query: 101 PSTSLNSSGDSYATSQPLVNNVTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISGKKH 160
P SL Y + V + P ++ +P+ C +CN+ NS Q H GK H
Sbjct: 35 PPKSLGLGPSFYHAQDEELAKVVEQDPMLEELCKPLCCKLCNVTLNSAQQAQAHYQGKNH 94
Query: 161 LRNLQNQHNPSAATLK-RSCNTINKVSLPSQELEMKRQKLLN--GGAAVDSVR--VCTVC 215
+ L+N + ++ R N++ V P Q + + Q + GG + + C +C
Sbjct: 95 SKKLRNYYAANSCPAPTRMSNSVEPV--PPQVVSLPAQMGSSKPGGRVILATENDYCKLC 152
Query: 216 NIACNGQEAFNDHLSGKKHAAQV 238
+ + + H GK HA ++
Sbjct: 153 DASFSSPAVAQAHYQGKNHAKRL 175
>ZFIN|ZDB-GENE-070209-152 [details] [associations]
symbol:znf346 "zinc finger protein 346"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
ZFIN:ZDB-GENE-070209-152 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
InterPro:IPR022755 Pfam:PF12171 GeneTree:ENSGT00510000046606
EMBL:BX649250 IPI:IPI00805223 Ensembl:ENSDART00000085786
ArrayExpress:F1Q771 Bgee:F1Q771 Uniprot:F1Q771
Length = 301
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 36/126 (28%), Positives = 54/126 (42%)
Query: 112 YATSQPLVNNVTQSIPTQSKVIQPVR---CVVCNIDCNSKDVFQKHISGKKHLRNLQNQH 168
+ + +P+ S QS V + + C VCN+ +S V Q H GK H +NL+ Q
Sbjct: 90 HGSEEPIAKRFKPSGDDQSNVDEKDKYKACSVCNMTFSSPVVAQSHYQGKVHSKNLRMQS 149
Query: 169 NPSAATLKRSCNTINKVSLPSQELEMKRQKLLNGGAAVDSVRVCTVCNIACNGQEAFNDH 228
S +LP + + K+ + G A D R C++C + N H
Sbjct: 150 IGSQTP-----------ALPQPKAQAKKDDGMQGPAEQDPNRFCSICQASFNNPLMAQQH 198
Query: 229 LSGKKH 234
SGKKH
Sbjct: 199 YSGKKH 204
>UNIPROTKB|Q0IIC4 [details] [associations]
symbol:ZMAT3 "Zinc finger matrin-type protein 3"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0040008 "regulation of growth" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR003604
InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355 SMART:SM00451
GO:GO:0006915 GO:GO:0005730 GO:GO:0046872 GO:GO:0015031
GO:GO:0008270 GO:GO:0006974 GO:GO:0003723 GO:GO:0040008
InterPro:IPR022755 Pfam:PF12171 EMBL:BC122710 IPI:IPI00717626
RefSeq:NP_001069576.1 UniGene:Bt.60982 ProteinModelPortal:Q0IIC4
STRING:Q0IIC4 Ensembl:ENSBTAT00000016535 GeneID:538512
KEGG:bta:538512 CTD:64393 eggNOG:NOG77347
GeneTree:ENSGT00510000046606 HOGENOM:HOG000065751
HOVERGEN:HBG052765 InParanoid:Q0IIC4 KO:K10137 OMA:YNPRPRQ
OrthoDB:EOG4K6G4Z NextBio:20877410 Uniprot:Q0IIC4
Length = 289
Score = 121 (47.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 131 KVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNP-SAATLKRSCNTINKVSLPS 189
++ +P+ C +CN+ NS Q H GK H + L+N + S R N + V+ P+
Sbjct: 65 ELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNAVEAVAAPA 124
Query: 190 QELEMKRQKLLNGGAAVDSVR--VCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLAF 247
+ + GG + + C +C+ + + H GK HA + + L + +
Sbjct: 125 VSVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKR-LRLAEAQSN 183
Query: 248 SLIDS 252
S DS
Sbjct: 184 SFSDS 188
>UNIPROTKB|E2R5Y8 [details] [associations]
symbol:ZMAT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR015880
SMART:SM00355 SMART:SM00451 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR022755 Pfam:PF12171
GeneTree:ENSGT00510000046606 KO:K10137 OMA:YNPRPRQ
EMBL:AAEX03017248 EMBL:AAEX03017249 RefSeq:XP_003640189.1
Ensembl:ENSCAFT00000017629 GeneID:100855542 KEGG:cfa:100855542
Uniprot:E2R5Y8
Length = 289
Score = 116 (45.9 bits), Expect = 0.00014, P = 0.00014
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 131 KVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNP-SAATLKRSCNTINKVSLPS 189
++ +P+ C +CN+ NS Q H GK H + L+N + S R N + V+ P+
Sbjct: 65 ELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPVAPPA 124
Query: 190 QELEMKRQKLLNGGAAVDSVR--VCTVCNIACNGQEAFNDHLSGKKHAAQV-ITLLSSLA 246
+ + GG + + C +C+ + + H GK HA ++ + S +
Sbjct: 125 VPVAPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNS 184
Query: 247 FS 248
FS
Sbjct: 185 FS 186
>UNIPROTKB|Q8AVN9 [details] [associations]
symbol:znf346 "Zinc finger protein 346" species:8355
"Xenopus laevis" [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003604
InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355 SMART:SM00451
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0003725 HOVERGEN:HBG061007 CTD:23567 EMBL:AF005083
EMBL:BC041713 RefSeq:NP_001080778.1 UniGene:Xl.386 PDB:1ZU1
PDBsum:1ZU1 ProteinModelPortal:Q8AVN9 SMR:Q8AVN9 GeneID:380471
KEGG:xla:380471 Xenbase:XB-GENE-967548 EvolutionaryTrace:Q8AVN9
Uniprot:Q8AVN9
Length = 524
Score = 87 (35.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 103 TSLNSSGDSYATSQPLVNNVTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLR 162
T SSG + A + P+ N+ +P + C CNI NS + +Q H+SG KH
Sbjct: 197 TIYTSSGQTPAQA-PIPLNLNSPMPGSGSAGKGFSCDKCNIVLNSIEQYQAHVSGAKHKN 255
Query: 163 NLQN 166
L +
Sbjct: 256 QLMS 259
Score = 74 (31.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 212 CTVCNIACNGQEAFNDHLSGKKHAAQVITLLSS 244
C CNI N E + H+SG KH Q++++ S
Sbjct: 402 CDTCNIVLNSIEQYQAHVSGAKHKNQLMSMTPS 434
Score = 68 (29.0 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 212 CTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
C CNI N E + H+SG KH ++++
Sbjct: 345 CDTCNIVLNSIEQYQAHISGAKHKNHLMSM 374
>ZFIN|ZDB-GENE-091204-66 [details] [associations]
symbol:si:dkey-26l17.1 "si:dkey-26l17.1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000690 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 ZFIN:ZDB-GENE-091204-66 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00390000002371
EMBL:BX901973 IPI:IPI00608488 RefSeq:XP_001921908.1
UniGene:Dr.130701 Ensembl:ENSDART00000055890 GeneID:793202
KEGG:dre:793202 CTD:201181 NextBio:20931353 Bgee:E7FE25
Uniprot:E7FE25
Length = 460
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 37/136 (27%), Positives = 56/136 (41%)
Query: 101 PSTSLNSSGDSYATSQ--PLVNNVTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISGK 158
P L SGD+ Q P + + P +SK Q + C +C + NS + H SG
Sbjct: 203 PDALLEPSGDTSPPPQDSPAADTPAEKEPKKSK--QHLHCPICKVTVNSSIQMEAHNSGT 260
Query: 159 KHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQKLLNGGAAVDSVRVCTVCNIA 218
KH + Q S +R ++ S S+ L K G A S C VC I
Sbjct: 261 KHKLMMDGQ---SVLPRRRGKAMSSRPSCKSKRLASKGSL----GVASKSF-YCEVCEIH 312
Query: 219 CNGQEAFNDHLSGKKH 234
N + + H++ ++H
Sbjct: 313 VNSETQLSQHMNSRRH 328
>UNIPROTKB|Q9HA38 [details] [associations]
symbol:ZMAT3 "Zinc finger matrin-type protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR003604 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 SMART:SM00451 GO:GO:0006915
GO:GO:0005730 GO:GO:0006917 GO:GO:0046872 GO:GO:0015031
EMBL:CH471052 GO:GO:0008270 GO:GO:0006974 GO:GO:0003723
GO:GO:0040008 InterPro:IPR022755 Pfam:PF12171 HSSP:Q8AVN9 CTD:64393
eggNOG:NOG77347 HOGENOM:HOG000065751 HOVERGEN:HBG052765 KO:K10137
OMA:YNPRPRQ OrthoDB:EOG4K6G4Z EMBL:AF355465 EMBL:AY037945
EMBL:AK022358 EMBL:AK122768 EMBL:AC117456 EMBL:BC002896
IPI:IPI00008281 IPI:IPI00171537 RefSeq:NP_071915.1
RefSeq:NP_689426.1 UniGene:Hs.371609 ProteinModelPortal:Q9HA38
SMR:Q9HA38 IntAct:Q9HA38 MINT:MINT-6542853 STRING:Q9HA38
PhosphoSite:Q9HA38 DMDM:74734128 PaxDb:Q9HA38 PRIDE:Q9HA38
DNASU:64393 Ensembl:ENST00000311417 Ensembl:ENST00000432729
GeneID:64393 KEGG:hsa:64393 UCSC:uc003fjg.3 UCSC:uc003fji.3
GeneCards:GC03M178735 HGNC:HGNC:29983 MIM:606452 neXtProt:NX_Q9HA38
PharmGKB:PA145147560 InParanoid:Q9HA38 PhylomeDB:Q9HA38
GenomeRNAi:64393 NextBio:66321 ArrayExpress:Q9HA38 Bgee:Q9HA38
CleanEx:HS_ZMAT3 Genevestigator:Q9HA38 Uniprot:Q9HA38
Length = 289
Score = 111 (44.1 bits), Expect = 0.00054, P = 0.00054
Identities = 29/122 (23%), Positives = 52/122 (42%)
Query: 131 KVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNP-SAATLKRSCNTINKVSLPS 189
++ +P+ C +CN+ NS Q H GK H + L+N + S R N + + P
Sbjct: 65 ELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPV 124
Query: 190 QELEMKRQKLLNGGAAVDSVR--VCTVCNIACNGQEAFNDHLSGKKHAAQV-ITLLSSLA 246
+ + GG + + C +C+ + + H GK HA ++ + S +
Sbjct: 125 VPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNS 184
Query: 247 FS 248
FS
Sbjct: 185 FS 186
>ZFIN|ZDB-GENE-070705-184 [details] [associations]
symbol:zfr2 "zinc finger RNA binding protein 2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355
SMART:SM00451 ZFIN:ZDB-GENE-070705-184 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00550000074528 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 EMBL:CR936300 IPI:IPI01023707
Ensembl:ENSDART00000122341 ArrayExpress:F6PD25 Uniprot:F6PD25
Length = 1011
Score = 83 (34.3 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLAFSLIDSHLMLV 257
++ NG V + C +C+++C G +A+ H+ G KH +V+ L + L + + +LV
Sbjct: 356 QVTNGPRGVQTQLRCELCDVSCTGADAYAAHIRGSKHQ-KVVKLHTKLGKPIPSTEPVLV 414
Score = 79 (32.9 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 22/84 (26%), Positives = 41/84 (48%)
Query: 100 LPSTSLNSSGDSYATSQPLVNNVTQSIPTQSKVIQPVR---------CVVCNIDCNSKDV 150
L ++S ++SG S + S P V++ + Q+K+ +P C +C I C
Sbjct: 276 LANSSWSNSGGS-SVSSPAVSSYRKPAFHQNKIQKPKGPPKQPQLHYCDICKISCAGPQT 334
Query: 151 FQKHISGKKHLRNLQNQHNPSAAT 174
+++H+ G+KH + Q + S T
Sbjct: 335 YREHLEGQKHKKKEAAQKSGSQVT 358
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.129 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 267 253 0.00083 114 3 11 22 0.47 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 607 (65 KB)
Total size of DFA: 205 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.95u 0.43s 23.38t Elapsed: 00:00:02
Total cpu time: 22.96u 0.43s 23.39t Elapsed: 00:00:02
Start: Fri May 10 06:54:55 2013 End: Fri May 10 06:54:57 2013