BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024438
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2RV29|ZN346_DANRE Zinc finger protein 346 OS=Danio rerio GN=znf346 PE=2 SV=1
Length = 301
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 14/126 (11%)
Query: 112 YATSQPLVNNVTQSIPTQSKVIQPVR---CVVCNIDCNSKDVFQKHISGKKHLRNLQNQH 168
+ + +P+ S QS V + + C VCN+ +S V Q H GK H +NL+ Q
Sbjct: 90 HGSEEPIAKRFKPSGDDQSNVDEKDKYKACSVCNMTFSSPVVAQSHYQGKVHSKNLRMQS 149
Query: 169 NPSAATLKRSCNTINKVSLPSQELEMKRQKLLNGGAAVDSVRVCTVCNIACNGQEAFNDH 228
S +LP E + K+ + G A D R C++C + N H
Sbjct: 150 IGSQTP-----------ALPQPEAQAKKDDGMQGPAEQDPNRFCSICQASFNNPLMAQQH 198
Query: 229 LSGKKH 234
SGKKH
Sbjct: 199 YSGKKH 204
Score = 38.5 bits (88), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 24/97 (24%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C +C N+ + Q+H SGKKH +++ Q + T + P
Sbjct: 182 CSICQASFNNPLMAQQHYSGKKHKKHMNKQ---------KLMETFGPSTAP--------- 223
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKH 234
A+ CTVCNI N E + H+SG KH
Sbjct: 224 ------ASTVKGYPCTVCNIELNSVEQYQAHISGSKH 254
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSA 172
C VCNI+ NS + +Q HISG KH + + + P+A
Sbjct: 232 CTVCNIELNSVEQYQAHISGSKHKNHAKPKKGPNA 266
>sp|Q5U231|ZFR_XENTR Zinc finger RNA-binding protein OS=Xenopus tropicalis GN=zfr PE=2
SV=1
Length = 1065
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 24/109 (22%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C VC I C +++H+ G+KH + A LK S NT + S + +
Sbjct: 333 CDVCKISCAGPQTYKEHLEGQKHKKK--------EAALKASQNTTSS----STAVRGTQN 380
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLA 246
+L C +C+++C G +A+ H+ G KH +V+ L + L
Sbjct: 381 QLR-----------CELCDVSCTGADAYAAHIRGAKH-QKVVKLHTKLG 417
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 209 VRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSS 244
+ C VC I+C G + + +HL G+KH + L +S
Sbjct: 330 IHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKAS 365
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 136 VRCVVCNIDCNSKDVFQKHISGKKHLR 162
+RC +C++ C D + HI G KH +
Sbjct: 382 LRCELCDVSCTGADAYAAHIRGAKHQK 408
>sp|Q6GPM1|ZFR_XENLA Zinc finger RNA-binding protein OS=Xenopus laevis GN=zfr PE=2 SV=1
Length = 1054
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 24/109 (22%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C VC I C +++H+ G+KH + A LK S NT + S + +
Sbjct: 324 CDVCKISCAGPQTYKEHLEGQKHKKK--------EAALKASQNTTSS----STAVRGTQN 371
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLA 246
+L C +C+++C G +A+ H+ G KH +V+ L + L
Sbjct: 372 QLR-----------CELCDVSCTGADAYAAHIRGAKH-QKVVKLHTKLG 408
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 209 VRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSS 244
+ C VC I+C G + + +HL G+KH + L +S
Sbjct: 321 IHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKAS 356
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 136 VRCVVCNIDCNSKDVFQKHISGKKH 160
+RC +C++ C D + HI G KH
Sbjct: 373 LRCELCDVSCTGADAYAAHIRGAKH 397
>sp|Q8AVN9|ZN346_XENLA Zinc finger protein 346 OS=Xenopus laevis GN=znf346 PE=1 SV=1
Length = 524
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C CNI NS + +Q HISG KH +L ++ +S +
Sbjct: 345 CDTCNIVLNSIEQYQAHISGAKHKNHLM---------------SMTPLSEEGHTAAVAPS 389
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+G A C CNI N E + H+SG KH Q++++
Sbjct: 390 AFASGSAGKG--FSCDTCNIVLNSIEQYQAHVSGAKHKNQLMSM 431
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 18/132 (13%)
Query: 103 TSLNSSGDSYATSQPLVNNVTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLR 162
T SSG + A + P+ N+ +P + C CNI NS + +Q H+SG KH
Sbjct: 197 TIYTSSGQTPAQA-PIPLNLNSPMPGSGSAGKGFSCDKCNIVLNSIEQYQAHVSGAKHKN 255
Query: 163 NLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQKLLNGGAAVDSVRVCTVCNIACNGQ 222
L ++ +S + + + +G A C CNI N
Sbjct: 256 QLM---------------SMTPLSEEGHQAVVAPSAIASGSAGKG--FSCDTCNIVLNSI 298
Query: 223 EAFNDHLSGKKH 234
E + H+SG KH
Sbjct: 299 EQYQAHISGAKH 310
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C CNI NS + +Q HISG KH +L+ ++ +S +
Sbjct: 288 CDTCNIVLNSIEQYQAHISGAKHKNHLK---------------SMTPLSEEGHTAAVAPS 332
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+G A C CNI N E + H+SG KH ++++
Sbjct: 333 AFASGSAGKG--FSCDTCNIVLNSIEQYQAHISGAKHKNHLMSM 374
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C VCN+ +S V + H GK H++NL+ + + N K P+ + K
Sbjct: 97 CPVCNMTFSSPVVAESHYIGKTHIKNLRLREQ--GGVKEGMVNQAKKTRTPT--VATKSD 152
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQ 237
++ D + C +C+ N H +GKKH Q
Sbjct: 153 NKMD---HSDRAKFCKLCHSTFNNPLMAEQHYAGKKHKKQ 189
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C +C+ N+ + ++H +GKKH + Q S T + +P +
Sbjct: 164 CKLCHSTFNNPLMAEQHYAGKKHKK--QETKTQIMTIYTSSGQTPAQAPIP-----LNLN 216
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+ G + C CNI N E + H+SG KH Q++++
Sbjct: 217 SPMPGSGSAGKGFSCDKCNIVLNSIEQYQAHVSGAKHKNQLMSM 260
>sp|Q9ULV3|CIZ1_HUMAN Cip1-interacting zinc finger protein OS=Homo sapiens GN=CIZ1 PE=1
SV=2
Length = 898
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 83/208 (39%), Gaps = 42/208 (20%)
Query: 88 WQAGSLTYENGSLPSTSLNSSGDSYATSQPL---------VNNVTQSIPTQSKVIQPVRC 138
W AG GSL T L SS ++ PL V++ + T SK C
Sbjct: 542 WGAG------GSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFC 595
Query: 139 VVCNIDCNSKDVFQKHISGKKHLRNL-QNQHNPSAATL-------------------KRS 178
+C C+S+ FQ H+S +H + L + QH A L +R
Sbjct: 596 YICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRW 655
Query: 179 CNTINKVSLPSQELEMKRQKLLNGGAAVDSVR-VCTVCNIACNGQEAFNDHLSGKKH--- 234
CNT + +L ++ ++ + A S+R CTVCN F +H+ + H
Sbjct: 656 CNTCQLYYM--GDL-IQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDK 712
Query: 235 AAQVITLLSSLAFSLIDSHLMLVFLFCF 262
A ++ +L +A D + + + CF
Sbjct: 713 AKELKSLEKEIAGQDEDHFITVDAVGCF 740
>sp|Q6PCR6|ZFR_DANRE Zinc finger RNA-binding protein OS=Danio rerio GN=zfr PE=2 SV=2
Length = 1074
Score = 39.3 bits (90), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 21/109 (19%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C VC I C +++H+ G+KH + A LK S ++ + S + Q
Sbjct: 326 CDVCKISCAGPQTYKEHLEGQKHKKK--------EAALKVSQSSSSSSGGGSSARGTQNQ 377
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLA 246
+R C +C+++C G +A+ H+ G KH +V+ L + L
Sbjct: 378 -----------LR-CELCDVSCTGADAYAAHIRGAKH-QKVVKLHTKLG 413
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 209 VRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+ C VC I+C G + + +HL G+KH + L
Sbjct: 323 IHYCDVCKISCAGPQTYKEHLEGQKHKKKEAAL 355
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 136 VRCVVCNIDCNSKDVFQKHISGKKHLR 162
+RC +C++ C D + HI G KH +
Sbjct: 378 LRCELCDVSCTGADAYAAHIRGAKHQK 404
>sp|Q5REX3|ZFR_PONAB Zinc finger RNA-binding protein OS=Pongo abelii GN=ZFR PE=2 SV=1
Length = 1074
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 24/109 (22%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C VC I C +++H+ G+KH + A LK S N + + R
Sbjct: 333 CDVCKISCAGPQTYKEHLEGQKHKKK--------EAALKASQNASSSNNSTRGTQNQLR- 383
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLA 246
C +C+++C G +A+ H+ G KH +V+ L + L
Sbjct: 384 --------------CELCDVSCTGADAYAAHIRGAKH-QKVVKLHTKLG 417
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 209 VRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+ C VC I+C G + + +HL G+KH + L
Sbjct: 330 IHYCDVCKISCAGPQTYKEHLEGQKHKKKEAAL 362
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 136 VRCVVCNIDCNSKDVFQKHISGKKHLR 162
+RC +C++ C D + HI G KH +
Sbjct: 382 LRCELCDVSCTGADAYAAHIRGAKHQK 408
>sp|Q96KR1|ZFR_HUMAN Zinc finger RNA-binding protein OS=Homo sapiens GN=ZFR PE=1 SV=2
Length = 1074
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C VC I C +++H+ G+KH + + +L + +
Sbjct: 333 CDVCKISCAGPQTYKEHLEGQKHKKK--------------------EAALKASQNTSSSN 372
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLA 246
G + +R C +C+++C G +A+ H+ G KH +V+ L + L
Sbjct: 373 SSTRG--TQNQLR-CELCDVSCTGADAYAAHIRGAKH-QKVVKLHTKLG 417
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 209 VRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+ C VC I+C G + + +HL G+KH + L
Sbjct: 330 IHYCDVCKISCAGPQTYKEHLEGQKHKKKEAAL 362
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 136 VRCVVCNIDCNSKDVFQKHISGKKHLR 162
+RC +C++ C D + HI G KH +
Sbjct: 382 LRCELCDVSCTGADAYAAHIRGAKHQK 408
>sp|O88532|ZFR_MOUSE Zinc finger RNA-binding protein OS=Mus musculus GN=Zfr PE=1 SV=2
Length = 1074
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C VC I C +++H+ G+KH + + +L + +
Sbjct: 333 CDVCKISCAGPQTYKEHLEGQKHKKK--------------------EAALKASQNTSSSN 372
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLA 246
G + +R C +C+++C G +A+ H+ G KH +V+ L + L
Sbjct: 373 NSTRG--TQNQLR-CELCDVSCTGADAYAAHIRGAKH-QKVVKLHTKLG 417
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 209 VRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+ C VC I+C G + + +HL G+KH + L
Sbjct: 330 IHYCDVCKISCAGPQTYKEHLEGQKHKKKEAAL 362
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 136 VRCVVCNIDCNSKDVFQKHISGKKHLR 162
+RC +C++ C D + HI G KH +
Sbjct: 382 LRCELCDVSCTGADAYAAHIRGAKHQK 408
>sp|Q9JJN2|ZFHX4_MOUSE Zinc finger homeobox protein 4 OS=Mus musculus GN=Zfhx4 PE=1 SV=1
Length = 3550
Score = 38.9 bits (89), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 28/139 (20%)
Query: 130 SKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHN-----------PSAATLKRS 178
++ +P RC VCN +K H+ KHL N+QN N P+ T
Sbjct: 691 TRGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPTPNTSLSG 750
Query: 179 CNTINKVSLPSQELEMKRQKLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQV 238
C T + S P Q+ R C VC+ N H++ +KH +
Sbjct: 751 CGTPSP-SKPKQK----------------PTRRCEVCDYETNVARNLRIHMTSEKHMHNM 793
Query: 239 ITLLSSLAFSLIDSHLMLV 257
+ L ++ + HL L
Sbjct: 794 MLLQQNMKQIQHNLHLGLA 812
>sp|Q6PBT9|Z385B_DANRE Zinc finger protein 385B OS=Danio rerio GN=znf385b PE=2 SV=1
Length = 492
Score = 38.5 bits (88), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C +C + NS + H +G KH L+ + I P +L+++
Sbjct: 308 CSLCKVAVNSLSQLEAHNTGSKHKTMLE---------ARNGAGPIKAYPRPGSKLKVQAT 358
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQV 238
+L G + C +C++ N + H+S ++H +V
Sbjct: 359 QLNKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 399
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 125 SIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNP 170
SIP + K + + C +C + NS + H G KH + L+ Q +P
Sbjct: 134 SIPPKKKQV--ISCNICQLRFNSDSQAEAHYKGSKHAKKLKAQESP 177
>sp|Q9C0A1|ZFHX2_HUMAN Zinc finger homeobox protein 2 OS=Homo sapiens GN=ZFHX2 PE=2 SV=3
Length = 2572
Score = 38.5 bits (88), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 15/109 (13%)
Query: 134 QPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQN-QHNPSAATLKRSCNTINKVSLPSQEL 192
+P RC VCN +K H+ KHL NLQ Q P + + SLP
Sbjct: 506 KPYRCDVCNYSTTTKGNLSIHMQSDKHLANLQGFQAGPGGQ------GSPPEASLPPSAG 559
Query: 193 EMKRQKLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+ + + S C VC+ N H++ +KH V+ L
Sbjct: 560 DKEPK--------TKSSWQCKVCSYETNISRNLRIHMTSEKHMQNVLML 600
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 136 VRCVVCNIDCNSKDVFQKHISGKKHLRNLQ 165
+RC +C+ + NSK+ Q H G H N Q
Sbjct: 821 LRCNICDFESNSKEKMQLHARGAAHEENSQ 850
>sp|B0JZ85|ZN346_XENTR Zinc finger protein 346 OS=Xenopus tropicalis GN=znf346 PE=2 SV=2
Length = 354
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKR- 196
C +CN+ +S V + H SGK H++NL+ L+ + +++L + R
Sbjct: 97 CPICNMTFSSPVVAESHYSGKTHIKNLR---------LREQGGVTEGMLHQAKKLVVTRT 147
Query: 197 ----QKLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQ 237
K+ N D + C +C+ N H +GKKH Q
Sbjct: 148 PTIATKIDNRMDQSDPTKFCKLCHATFNNPLMAEQHYAGKKHKKQ 192
Score = 37.7 bits (86), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 29/156 (18%)
Query: 96 ENGSLPSTSLNSSGDSYATSQPLV-----NNVTQSIPTQSKVIQPVRCVVCNIDCNSKDV 150
E G + L+ + T P + N + QS PT+ C +C+ N+ +
Sbjct: 127 EQGGVTEGMLHQAKKLVVTRTPTIATKIDNRMDQSDPTK-------FCKLCHATFNNPLM 179
Query: 151 FQKHISGKKHLRN-----LQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQKLLNGGAA 205
++H +GKKH + L + S T ++ IN V+ P L G +
Sbjct: 180 AEQHYAGKKHKKQETKTQLMTIYTSSGHTPAQAPIAIN-VNSP-----------LPGSGS 227
Query: 206 VDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
C CNI N E + H+SG KH Q++++
Sbjct: 228 AGKGFSCDTCNIVLNSIEQYQAHVSGAKHKNQLMSM 263
>sp|Q28EG9|ZMAT1_XENTR Zinc finger matrin-type protein 1 OS=Xenopus tropicalis GN=zmat1
PE=2 SV=1
Length = 553
Score = 37.7 bits (86), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 22/97 (22%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C +C N V Q+H SGKKH RN K+ + + E+
Sbjct: 225 CKLCCASFNKALVAQQHYSGKKHARN---------QARKKMMEEMEGTGVADSEVS---- 271
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKH 234
D VC +CNI E + H+ G KH
Sbjct: 272 ---------DGRYVCPICNITLTSIEMYQSHMQGNKH 299
>sp|Q9HA38|ZMAT3_HUMAN Zinc finger matrin-type protein 3 OS=Homo sapiens GN=ZMAT3 PE=1
SV=1
Length = 289
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 130 SKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNP-SAATLKRSCNTINKVSLP 188
++ +P+ C +CN+ NS Q H GK H + L+N + S R N + + P
Sbjct: 64 EELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATP 123
Query: 189 SQELEMKRQKLLNGGAAVDSVR--VCTVCNIACNGQEAFNDHLSGKKHAAQV 238
+ + GG + + C +C+ + + H GK HA ++
Sbjct: 124 VVPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRL 175
>sp|Q61329|ZFHX3_MOUSE Zinc finger homeobox protein 3 OS=Mus musculus GN=Zfhx3 PE=1 SV=1
Length = 3726
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 134 QPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHN 169
+P RC VCN +K H+ KHL N+QN N
Sbjct: 725 KPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQN 760
>sp|Q57886|RIO1_METJA RIO-type serine/threonine-protein kinase Rio1 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=rio1 PE=3 SV=1
Length = 290
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 95 YENGSLPSTSLNSSGDSYATSQPLVNNVTQSIPTQSKVIQPV---RCV-VCN------ID 144
YE G L L+ +P+ + +QS+ TQ + P+ C+ +CN +D
Sbjct: 205 YEEGELVHGDLSEYNILVKDDEPVFIDFSQSVITQHPLAHPLLIRDCINICNFFRRKRVD 264
Query: 145 CNSKDVFQKHISGKK 159
CN KD++ K+I+GK+
Sbjct: 265 CNYKDLY-KYITGKE 278
>sp|Q15911|ZFHX3_HUMAN Zinc finger homeobox protein 3 OS=Homo sapiens GN=ZFHX3 PE=1 SV=2
Length = 3703
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 134 QPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHN 169
+P RC VCN +K H+ KHL N+QN N
Sbjct: 724 KPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQN 759
>sp|Q86UP3|ZFHX4_HUMAN Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1
Length = 3567
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 50/135 (37%), Gaps = 28/135 (20%)
Query: 134 QPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHN-----------PSAATLKRSCNTI 182
+P RC VCN +K H+ KHL N+QN N P+ T C T
Sbjct: 697 KPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPAPNTSLSGCGTP 756
Query: 183 NKVSLPSQELEMKRQKLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLL 242
+ S P Q+ + C VC+ N H++ +KH ++ L
Sbjct: 757 SP-SKPKQKPTWR----------------CEVCDYETNVARNLRIHMTSEKHMHNMMLLQ 799
Query: 243 SSLAFSLIDSHLMLV 257
++ + HL L
Sbjct: 800 QNMKQIQHNLHLGLA 814
>sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D OS=Rattus norvegicus GN=Znf385d PE=2 SV=1
Length = 395
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 19/158 (12%)
Query: 82 SVAWVTWQAGSLTYENGSLPSTSLNSSGDSYATSQPLVNNVTQSIPTQSKVIQPVR---C 138
S A A S S +T L S+ + T+ N S PT+++ + R C
Sbjct: 148 STAGTQVIARSADMRKSSEVTTELTSNAEKSLTAAVAAGN-NSSPPTETEEEKAKRLLYC 206
Query: 139 VVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQK 198
+C + NS + H SG KH L+ ++ + T+K + P MK +
Sbjct: 207 SLCKVAVNSASQLEAHNSGTKHKTMLEARNG--SGTIK---------AFP--RAGMKGKG 253
Query: 199 LLNGG--AAVDSVRVCTVCNIACNGQEAFNDHLSGKKH 234
+N G + C +C++ N + H+S ++H
Sbjct: 254 PVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRH 291
>sp|Q8BXJ8|Z385B_MOUSE Zinc finger protein 385B OS=Mus musculus GN=Znf385b PE=2 SV=1
Length = 482
Score = 35.4 bits (80), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 23/138 (16%)
Query: 101 PSTSLNSSGDSYATSQPLVNNVTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISGKKH 160
PS S N + S A S+ + K + + C +C + NS + H +G KH
Sbjct: 274 PSKSTNGAPGSVAESE------------EEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKH 321
Query: 161 LRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQKLLNGGAAVDSVRVCTVCNIACN 220
++ ++ A +K S P +K Q G + + C +C++ N
Sbjct: 322 KTMVEARNG--AGPIK---------SYPRPGSRLKVQNGSKGSGLQNKMFHCEICDVHVN 370
Query: 221 GQEAFNDHLSGKKHAAQV 238
+ H+S ++H +V
Sbjct: 371 SEIQLKQHISSRRHKDRV 388
>sp|Q66K41|Z385C_HUMAN Zinc finger protein 385C OS=Homo sapiens GN=ZNF385C PE=2 SV=2
Length = 422
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 20/133 (15%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C C + NS Q H +G KH ++ Q + R VS + KR
Sbjct: 223 CPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSRGRP------VSRGGAGHKAKRV 276
Query: 198 KLLNGGAAVDSVRV-CTVCNIACNGQEAFNDHLSGKKHAAQV-------------ITLLS 243
GG S C +C + N + H+S ++H ++ + +
Sbjct: 277 TGGRGGRQGPSPAFHCALCQLQVNSETQLKQHMSSRRHKDRLAGKTPKPSSQHSKLQKHA 336
Query: 244 SLAFSLIDSHLML 256
+LA S++ S L L
Sbjct: 337 ALAVSILKSKLAL 349
>sp|O14213|MU185_SCHPO Meiotically up-regulated gene 185 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug185 PE=1 SV=1
Length = 380
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 16/76 (21%)
Query: 94 TYENGSLPSTSL----NSSGDSYATSQPLVNNVTQSIPTQSKVIQPVRCVVCNIDCNSKD 149
T++N S+ S ++ +S D + S+ +VN+ P+ C+VCN + S++
Sbjct: 236 TFKNQSIASWTIIDQEETSSDDESLSKEIVNS------------NPIMCMVCNKNFRSQN 283
Query: 150 VFQKHISGKKHLRNLQ 165
+ H + KKH +NL+
Sbjct: 284 QLENHENSKKHKKNLR 299
>sp|O08781|ZMAT3_RAT Zinc finger matrin-type protein 3 OS=Rattus norvegicus GN=Zmat3
PE=2 SV=1
Length = 289
Score = 35.0 bits (79), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 131 KVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNP-SAATLKRSCNTINKVSLPS 189
++ +P+ C +CN+ NS Q H GK H + L+N + S R + V+ P
Sbjct: 65 ELCKPLFCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSSVAEPVATPL 124
Query: 190 QELEMKRQKLLNGGAAVDSVR--VCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLAF 247
+ + GG + + C +C+ + + H GK HA + + L + +
Sbjct: 125 VPVPPQVGSCKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKR-LRLAEAQSH 183
Query: 248 SLIDS 252
S DS
Sbjct: 184 SFSDS 188
>sp|O73590|ZFHX4_CHICK Zinc finger homeobox protein 4 OS=Gallus gallus GN=ZFHX4 PE=2 SV=2
Length = 3573
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 134 QPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHN 169
+P RC VCN +K H+ KHL N+QN N
Sbjct: 693 KPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQN 728
>sp|Q7NSK6|PLSX_CHRVO Phosphate acyltransferase OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=plsX PE=3 SV=1
Length = 345
Score = 34.7 bits (78), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 10 PPSFTYLSNHPTIPNPNPSSYFSYPQPAVHHAEPAIYPPGIDPDADSGSHPSTHVGIEN- 68
P S +L +HP + QPA+ AE A++ + H + VG++
Sbjct: 21 PASIQFLQDHP-----DTHLILVGDQPALE-AELALHDGAVRERILI-QHATQVVGMDEA 73
Query: 69 -QIPTQYYVDPNAVSVAWVTWQAGSLTYENGSLPSTSLNSSGDSYATSQPLVNNV-TQSI 126
Q+ + D +++ VA +L E + + S ++G AT++ ++ +
Sbjct: 74 PQLALKNKKD-SSMRVAI------NLVKEGKAQAAVSAGNTGALMATARFVLKTIPGIDR 126
Query: 127 PTQSKVIQPVRCVVC------NIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCN 180
P +K++ V+ C N+DC + + Q I G + + LQ + NPS L
Sbjct: 127 PAIAKLLPNVKGTSCVLDLGANVDCTPEQLLQFGIMGSELMACLQGKANPSVGLLNIGSE 186
Query: 181 TINKVSLPSQELEMKRQKLLNGGAAVDSVRVC--TVCNIACNG 221
I + E+ RQ L+ V+ +C T + C+G
Sbjct: 187 DIKGNDNIKKTAELLRQSELHFYGNVEGDDICKGTTDVVVCDG 229
>sp|Q5R4W8|ZN346_PONAB Zinc finger protein 346 OS=Pongo abelii GN=ZNF346 PE=2 SV=1
Length = 310
Score = 34.7 bits (78), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRN--LQNQHNPSAATLKRSCNTINKVSLPSQELEMK 195
C +CN+ +S V Q H GK H +N L+ Q A KR N L + L +
Sbjct: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLTNPF----LVASTLALH 191
Query: 196 RQKLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+ + + +D + C++C+ N H GKKH Q L
Sbjct: 192 QNREM-----IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKL 232
>sp|O54836|ZMAT3_MOUSE Zinc finger matrin-type protein 3 OS=Mus musculus GN=Zmat3 PE=2
SV=1
Length = 290
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 131 KVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQH--NPSAATLKRSCNTINKVSLP 188
++ +P+ C +CN+ NS Q H GK H + L+N + N + S V+ P
Sbjct: 65 ELCKPLFCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARVSSVVAEPVATP 124
Query: 189 SQELEMKRQKLLNGGAAVDSVR--VCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLA 246
+ + GG + + C +C+ + + H GK HA + + L + +
Sbjct: 125 LVPVPPQVGSCKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKR-LRLAEAQS 183
Query: 247 FSLIDS 252
S DS
Sbjct: 184 HSFSDS 189
>sp|Q562A2|ZFR_RAT Zinc finger RNA-binding protein OS=Rattus norvegicus GN=Zfr PE=1
SV=2
Length = 1073
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 205 AVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLA 246
A + +C +C+++C G +A+ H+ G KH +V+ L + L
Sbjct: 375 ACGKLHLCRLCDVSCTGADAYAAHIRGAKH-QKVVKLHTKLG 415
>sp|Q8BV57|SRCRL_MOUSE Soluble scavenger receptor cysteine-rich domain-containing protein
SSC5D OS=Mus musculus GN=Ssc5d PE=1 SV=1
Length = 1371
Score = 33.9 bits (76), Expect = 1.4, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 11 PSFTYLSNHPT-IPNPNPSSYFSY-PQPAVHHAEPAIYPPGIDPDADSGSHPST 62
P+ + ++HPT IP N +SY + PQP + +P P P + +HPS+
Sbjct: 1115 PTQPFTASHPTSIPQLNTTSYPTIAPQPTTNPQQPRSPHPATSPQPPTNTHPSS 1168
>sp|Q569K4|Z385B_HUMAN Zinc finger protein 385B OS=Homo sapiens GN=ZNF385B PE=2 SV=1
Length = 471
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 129 QSKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLP 188
+ K + + C +C + NS + H +G KH ++ ++ A +K S P
Sbjct: 278 EEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNG--AGPIK---------SYP 326
Query: 189 SQELEMKRQKLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQV 238
+K Q G + C +C++ N + H+S ++H +V
Sbjct: 327 RPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 376
>sp|Q9UL40|ZN346_HUMAN Zinc finger protein 346 OS=Homo sapiens GN=ZNF346 PE=1 SV=1
Length = 294
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 23/104 (22%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C +CN+ +S V Q H GK H +NL+ + + KV Q EM
Sbjct: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQST------------KVEALHQNREM--- 180
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+D + C++C+ N H GKKH Q L
Sbjct: 181 --------IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKL 216
>sp|Q9P374|YLM7_SCHPO Zinc finger protein C19B12.07c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC19B12.07c PE=3 SV=1
Length = 319
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/44 (25%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 119 VNNVTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLR 162
+N + + I + ++ RC+ C++ C +K + ++H++ K+H R
Sbjct: 132 INRLLEKIKNE---LESFRCLCCHVPCKNKKLLREHMNNKRHFR 172
>sp|Q0IIC4|ZMAT3_BOVIN Zinc finger matrin-type protein 3 OS=Bos taurus GN=ZMAT3 PE=2 SV=1
Length = 289
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 130 SKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNP-SAATLKRSCNTINKVSLP 188
++ +P+ C +CN+ NS Q H GK H + L+N + S R N + V+ P
Sbjct: 64 EELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNAVEAVAAP 123
Query: 189 SQELEMKRQKLLNGGAAVDSVR--VCTVCNIACNGQEAFNDHLSGKKHAAQVITLLSSLA 246
+ + + GG + + C +C+ + + H GK HA + + L + +
Sbjct: 124 AVSVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKR-LRLAEAQS 182
Query: 247 FSLIDS 252
S DS
Sbjct: 183 NSFSDS 188
>sp|Q96PM9|Z385A_HUMAN Zinc finger protein 385A OS=Homo sapiens GN=ZNF385A PE=2 SV=1
Length = 366
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRS 178
C +CN+ NS+ ++HIS ++H + + NP + K+S
Sbjct: 243 CEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKS 283
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 22/133 (16%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHN--PSAATLKRSCNTINKVSLPSQELEMK 195
C +C + NS + H G KH L+ + P A + T + P+Q
Sbjct: 183 CALCKVAVNSLSQLEAHNKGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQ----- 237
Query: 196 RQKLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKH----AAQVITLLSSLAFSLID 251
D C +CN+ N + H+S ++H A + LLS S
Sbjct: 238 -----------DRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGA 286
Query: 252 SHLMLVFLFCFKI 264
L F ++
Sbjct: 287 GELAGTLTFSKEL 299
>sp|O73673|GCR_PAROL Glucocorticoid receptor OS=Paralichthys olivaceus GN=nr3c1 PE=2
SV=1
Length = 807
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 60 PSTHVGIENQIPTQYYVDPNAVSVAWVT----WQAGSLTYENGSLPSTSLNSSGDSYATS 115
PS+ VG+++Q P + + AV+ +W + + N LPS +++ S+++S
Sbjct: 360 PSSTVGLQDQKPFGIFSNLPAVAESWTRGGRFGEPSGIQRGNDGLPSAAMSPFSVSFSSS 419
Query: 116 QPLVN-NVTQSIPTQSKVIQPVR--CVVCN----------IDCNS-KDVFQKHISGKKHL 161
P N + ++P SK P C+VC+ + C S K F++ + G +
Sbjct: 420 SPRTGENSSSAVPGLSKPSGPTHKICLVCSDEASGCHYGVVTCGSCKVFFKRAVEGWRAR 479
Query: 162 RNLQNQHN 169
+N QHN
Sbjct: 480 QNTDGQHN 487
>sp|Q9H898|ZMAT4_HUMAN Zinc finger matrin-type protein 4 OS=Homo sapiens GN=ZMAT4 PE=2
SV=1
Length = 229
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 137 RCVVCNIDCNSKDVFQKHISGKKHLRNLQNQ 167
RC +C++ NS + + H+ G KH NL+N+
Sbjct: 199 RCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 229
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 195 KRQKLLNGGAA--VDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLL 242
KR + NG A VD + CT+CN++ + H GK HA ++ LL
Sbjct: 58 KRLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLL 107
Score = 30.8 bits (68), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 21/97 (21%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLPSQELEMKRQ 197
C +C N+ + Q+H GKKH +N A L++ T++ L +
Sbjct: 147 CGLCAAWFNNPLMAQQHYDGKKHKKNA-----ARVALLEQLGTTLDMGELRGLRRNYR-- 199
Query: 198 KLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKH 234
CT+C+++ N E ++ HL G KH
Sbjct: 200 --------------CTICSVSLNSIEQYHAHLKGSKH 222
>sp|Q0VD35|ZMAT4_BOVIN Zinc finger matrin-type protein 4 OS=Bos taurus GN=ZMAT4 PE=2 SV=1
Length = 229
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 137 RCVVCNIDCNSKDVFQKHISGKKHLRNLQNQ 167
RC C++ NS + + H+ G KH NL+N+
Sbjct: 199 RCTTCSVSLNSIEQYHAHLKGSKHQTNLKNK 229
Score = 31.6 bits (70), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 195 KRQKLLNGGAA--VDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLL 242
KR + NG A VD + CT+CN++ + H GK HA ++ LL
Sbjct: 58 KRLRSENGNDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLL 107
>sp|Q8BZ94|ZMAT4_MOUSE Zinc finger matrin-type protein 4 OS=Mus musculus GN=Zmat4 PE=2
SV=1
Length = 229
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 137 RCVVCNIDCNSKDVFQKHISGKKHLRNLQNQ 167
RC C++ NS + + H+ G KH NL+N+
Sbjct: 199 RCTTCSVSLNSIEQYHAHLQGSKHQTNLKNK 229
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 195 KRQKLLNGGAA--VDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITLL 242
KR + NG A VD + CT+CN++ + H GK HA ++ LL
Sbjct: 58 KRLRAENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLL 107
>sp|B8E0Y4|PLSX_DICTD Phosphate acyltransferase OS=Dictyoglomus turgidum (strain Z-1310 /
DSM 6724) GN=plsX PE=3 SV=1
Length = 336
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 98 GSLPSTSLNSSGDSYATSQPLVNNVTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISG 157
G++ S++L G +P ++ + IPT +++ + + N+DC + + Q + G
Sbjct: 104 GAVMSSALLYLGRIRGIKRPAISTL---IPTLTQIPSIILDIGANVDCKKEYLEQFALMG 160
Query: 158 KKHLRNLQNQHNPSAATL 175
K ++ + N NP A L
Sbjct: 161 KVYMEEIFNVKNPKIALL 178
>sp|A9IIH2|PLSX_BORPD Phosphate acyltransferase OS=Bordetella petrii (strain ATCC BAA-461
/ DSM 12804 / CCUG 43448) GN=plsX PE=3 SV=1
Length = 354
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 122 VTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNT 181
+ SIP Q+ V + N+DC ++ + Q I G + + ++ NP+ L
Sbjct: 128 IATSIPNQTGRATTVLDLGANVDCTAEHLLQFAIMGTALTQAVDHRDNPTVGLLNIGEEV 187
Query: 182 INKVSLPSQELEMKRQKLLN--GGAAVDSVRVCTVCNIACNG 221
I + + E+ R+ LN G + + TV + C+G
Sbjct: 188 IKGNEVVKEAAELLRRSPLNFRGNVEGNDIFKGTVDVVVCDG 229
>sp|Q5ZI08|SPT5H_CHICK Transcription elongation factor SPT5 OS=Gallus gallus GN=SUPT5H PE=2
SV=1
Length = 1079
Score = 32.0 bits (71), Expect = 4.5, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 53/147 (36%), Gaps = 30/147 (20%)
Query: 11 PSFTYLSNHPTIPNP-------NPSSYFSYPQPAVHHAEPAIYPPGIDPDADSGSHPSTH 63
PS + S H P+P +P+SY P P + A P+ P G P P +
Sbjct: 896 PSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGY 955
Query: 64 ------VGIEN----------QIPTQ-YYVDPNAVSVAWVTWQAGSLTYENGSLPSTSLN 106
GIE Q+ + Y+D AV Q G + G + S L
Sbjct: 956 NPHTPGSGIEQSSSDWVTTDIQVKVRDTYLDSQAVG------QTGVIRSVTGGMCSVYLK 1009
Query: 107 SSGDSYATSQPLVNNVTQSIPTQSKVI 133
S + S + VT + + KVI
Sbjct: 1010 DSEKVVSISSEHLEPVTPTKSNKVKVI 1036
>sp|Q505G8|ZN827_MOUSE Zinc finger protein 827 OS=Mus musculus GN=Znf827 PE=2 SV=2
Length = 1078
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
Query: 115 SQPLVNNVTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHI 155
SQP +NN + K + CV CN C +K++F++H+
Sbjct: 1002 SQPSLNN-------EEKPEKGFECVFCNFVCKTKNMFERHL 1035
>sp|Q10096|YAOH_SCHPO Zinc finger protein C11D3.17 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC11D3.17 PE=1 SV=1
Length = 585
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 120 NNVTQSIPTQSKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSC 179
N+T+ SK +P+ C C I C KD+ ++HI Q HN + + S
Sbjct: 44 ENLTRHKACHSKA-EPIPCPYCEIKCKRKDLLKRHI---------QRFHNDKSVIEEGSK 93
Query: 180 NTIN-KVSLPSQELEMK 195
+ ++ K + QE MK
Sbjct: 94 DVLDVKAAASQQEDNMK 110
>sp|Q9BYK8|HELZ2_HUMAN Helicase with zinc finger domain 2 OS=Homo sapiens GN=HELZ2 PE=1
SV=6
Length = 2649
Score = 31.6 bits (70), Expect = 5.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 212 CTVCNIACNGQEAFNDHLSGKKHAAQV 238
C C + C+ QEAF +H + +HA V
Sbjct: 42 CPACLVTCHSQEAFENHCASSEHAQMV 68
>sp|Q9H6B1|Z385D_HUMAN Zinc finger protein 385D OS=Homo sapiens GN=ZNF385D PE=2 SV=1
Length = 395
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 129 QSKVIQPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATLKRSCNTINKVSLP 188
+ K + + C +C + NS + H SG KH L+ ++ + T+K + P
Sbjct: 197 EEKAKRLLYCSLCKVAVNSASQLEAHNSGTKHKTMLEARNG--SGTIK---------AFP 245
Query: 189 SQELEMKRQKLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKH 234
++ K + C +C++ N + H+S ++H
Sbjct: 246 RAGVKGKGPVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRH 291
>sp|A7H053|PLSX_CAMC5 Phosphate acyltransferase OS=Campylobacter curvus (strain 525.92)
GN=plsX PE=3 SV=2
Length = 329
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 139 VVCNIDCNSKDVFQKHISGKKHLRNLQNQHNPSAATL---KRSCNTINKVSLPSQELEMK 195
V N+DC S+ +FQ + G+ + + + N+ P L + +C N+VS + EL +
Sbjct: 140 VGANVDCRSEHLFQFAVMGEAYAKEILNRKLPRVGLLSNGEEACKG-NEVSKEAFEL-VS 197
Query: 196 RQKLLNGGAAVDSVRVCTVCNIACNG 221
R G A + V +V I C+G
Sbjct: 198 RLDSFVGNAEGNQVFDGSVDVIVCDG 223
>sp|Q9UPR6|ZFR2_HUMAN Zinc finger RNA-binding protein 2 OS=Homo sapiens GN=ZFR2 PE=2 SV=3
Length = 939
Score = 31.6 bits (70), Expect = 6.2, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 212 CTVCNIACNGQEAFNDHLSGKKH 234
C +C I+C G + + +HL G+KH
Sbjct: 273 CDICKISCAGPQTYREHLGGQKH 295
>sp|Q9R0B7|ZN346_MOUSE Zinc finger protein 346 OS=Mus musculus GN=Znf346 PE=1 SV=1
Length = 294
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 25/105 (23%)
Query: 138 CVVCNIDCNSKDVFQKHISGKKHLRNLQ-NQHNPSAATLKRSCNTINKVSLPSQELEMKR 196
C +CN+ +S V Q H GK H ++L+ Q + A L+ Q EM
Sbjct: 136 CPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALQ-------------QNREM-- 180
Query: 197 QKLLNGGAAVDSVRVCTVCNIACNGQEAFNDHLSGKKHAAQVITL 241
+D + C++C+ N H GK+H Q L
Sbjct: 181 ---------LDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKL 216
>sp|P28167|ZFH2_DROME Zinc finger protein 2 OS=Drosophila melanogaster GN=zfh2 PE=1 SV=2
Length = 3005
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 134 QPVRCVVCNIDCNSKDVFQKHISGKKHLRNLQ 165
+P RC +CN +K H+ KHL N+Q
Sbjct: 612 KPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQ 643
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,759,285
Number of Sequences: 539616
Number of extensions: 4563539
Number of successful extensions: 13638
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 13086
Number of HSP's gapped (non-prelim): 532
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)