Query 024439
Match_columns 267
No_of_seqs 122 out of 1191
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 08:14:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024439.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024439hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1goj_A Kinesin, kinesin heavy 100.0 3.4E-71 1.2E-75 489.1 17.8 244 1-266 85-333 (355)
2 1bg2_A Kinesin; motor protein, 100.0 1.9E-71 6.5E-76 485.7 15.2 240 1-263 82-325 (325)
3 2zfi_A Kinesin-like protein KI 100.0 9.1E-71 3.1E-75 488.6 19.5 246 1-266 94-357 (366)
4 2y65_A Kinesin, kinesin heavy 100.0 7.9E-71 2.7E-75 488.0 19.0 243 1-266 89-336 (365)
5 2h58_A Kinesin-like protein KI 100.0 1.3E-69 4.6E-74 475.0 23.9 238 1-264 85-329 (330)
6 3bfn_A Kinesin-like protein KI 100.0 8.7E-71 3E-75 489.3 15.7 241 1-266 103-350 (388)
7 3cob_A Kinesin heavy chain-lik 100.0 9.6E-70 3.3E-74 481.2 21.4 240 1-266 84-330 (369)
8 2wbe_C Bipolar kinesin KRP-130 100.0 3.9E-70 1.3E-74 485.3 18.9 248 1-266 105-364 (373)
9 2vvg_A Kinesin-2; motor protei 100.0 3.6E-70 1.2E-74 481.3 18.4 241 1-266 94-338 (350)
10 2rep_A Kinesin-like protein KI 100.0 4.8E-70 1.6E-74 484.3 19.1 242 1-263 120-376 (376)
11 1x88_A Kinesin-like protein KI 100.0 1.2E-70 4.2E-75 486.7 15.0 248 1-266 93-353 (359)
12 3b6u_A Kinesin-like protein KI 100.0 1.6E-70 5.5E-75 486.2 14.5 246 1-266 106-356 (372)
13 1f9v_A Kinesin-like protein KA 100.0 2.2E-69 7.4E-74 476.7 20.6 238 1-265 89-343 (347)
14 3gbj_A KIF13B protein; kinesin 100.0 5.4E-69 1.8E-73 475.3 22.0 240 1-262 97-349 (354)
15 3lre_A Kinesin-like protein KI 100.0 1.8E-69 6.2E-74 478.5 18.3 239 1-263 110-355 (355)
16 1t5c_A CENP-E protein, centrom 100.0 2.9E-69 1E-73 475.7 19.1 243 1-266 82-331 (349)
17 1ry6_A Internal kinesin; kines 100.0 8E-69 2.7E-73 474.4 21.7 239 1-265 89-333 (360)
18 3t0q_A AGR253WP; kinesin, alph 100.0 8.1E-69 2.8E-73 473.7 20.4 237 1-264 90-345 (349)
19 2owm_A Nckin3-434, related to 100.0 6E-69 2.1E-73 486.5 18.3 242 1-266 141-416 (443)
20 4a14_A Kinesin, kinesin-like p 100.0 4.1E-69 1.4E-73 475.1 16.0 247 1-261 88-344 (344)
21 2nr8_A Kinesin-like protein KI 100.0 2.2E-69 7.6E-74 477.6 13.8 241 1-263 108-358 (358)
22 3nwn_A Kinesin-like protein KI 100.0 2.4E-69 8.2E-74 477.5 13.8 241 1-263 109-359 (359)
23 2heh_A KIF2C protein; kinesin, 100.0 2.1E-68 7.1E-73 474.0 19.0 238 1-266 139-385 (387)
24 1v8k_A Kinesin-like protein KI 100.0 1.2E-67 4.2E-72 471.7 19.4 236 1-264 159-403 (410)
25 4etp_A Kinesin-like protein KA 100.0 1.3E-67 4.5E-72 473.8 18.4 238 1-265 145-399 (403)
26 3dc4_A Kinesin-like protein NO 100.0 2.5E-67 8.4E-72 462.2 16.9 230 1-264 99-336 (344)
27 3u06_A Protein claret segregat 100.0 1.7E-66 5.7E-71 466.6 17.2 234 1-264 143-383 (412)
28 4h1g_A Maltose binding protein 100.0 1.3E-64 4.4E-69 487.4 20.6 237 1-264 467-712 (715)
29 2kin_B Kinesin; motor protein, 99.9 6E-28 2E-32 173.5 5.4 76 191-266 3-79 (100)
30 3kin_B Kinesin heavy chain; mo 99.9 4.1E-26 1.4E-30 169.6 5.0 74 193-266 1-75 (117)
31 2o0a_A S.cerevisiae chromosome 99.3 3.3E-12 1.1E-16 107.0 8.1 188 1-265 97-291 (298)
32 2kjq_A DNAA-related protein; s 84.5 0.22 7.6E-06 37.6 0.4 12 3-14 42-53 (149)
33 3ec2_A DNA replication protein 84.4 0.19 6.6E-06 38.8 0.0 12 3-14 44-55 (180)
34 2w58_A DNAI, primosome compone 78.9 0.39 1.3E-05 37.6 -0.0 13 2-14 59-71 (202)
35 2qgz_A Helicase loader, putati 77.4 0.46 1.6E-05 40.4 -0.0 13 2-14 157-169 (308)
36 1ixz_A ATP-dependent metallopr 76.6 0.5 1.7E-05 38.6 -0.1 13 2-14 54-66 (254)
37 2eyu_A Twitching motility prot 76.4 0.51 1.8E-05 39.2 -0.1 12 3-14 31-42 (261)
38 1jbk_A CLPB protein; beta barr 76.3 0.51 1.7E-05 35.9 -0.1 13 2-14 48-60 (195)
39 4b4t_K 26S protease regulatory 76.2 1.6 5.5E-05 39.0 3.1 43 2-44 211-266 (428)
40 2p65_A Hypothetical protein PF 75.2 0.52 1.8E-05 35.8 -0.3 13 2-14 48-60 (187)
41 3bos_A Putative DNA replicatio 73.9 0.65 2.2E-05 37.0 -0.0 13 2-14 57-69 (242)
42 4gp7_A Metallophosphoesterase; 73.6 0.65 2.2E-05 35.6 -0.1 12 3-14 15-26 (171)
43 2r62_A Cell division protease 73.5 0.71 2.4E-05 37.9 0.1 13 2-14 49-61 (268)
44 3jvv_A Twitching mobility prot 73.4 0.68 2.3E-05 40.4 -0.1 12 3-14 129-140 (356)
45 3a00_A Guanylate kinase, GMP k 73.2 0.7 2.4E-05 35.8 0.0 12 3-14 7-18 (186)
46 1l8q_A Chromosomal replication 72.7 0.74 2.5E-05 39.1 0.0 13 2-14 42-54 (324)
47 1iy2_A ATP-dependent metallopr 72.2 0.75 2.6E-05 38.2 -0.1 13 2-14 78-90 (278)
48 2qz4_A Paraplegin; AAA+, SPG7, 71.8 0.77 2.6E-05 37.4 -0.1 13 2-14 44-56 (262)
49 3tr0_A Guanylate kinase, GMP k 71.7 0.77 2.7E-05 35.8 -0.1 12 3-14 13-24 (205)
50 1lvg_A Guanylate kinase, GMP k 71.6 0.79 2.7E-05 36.1 -0.1 12 3-14 10-21 (198)
51 1lv7_A FTSH; alpha/beta domain 71.5 0.79 2.7E-05 37.4 -0.1 13 2-14 50-62 (257)
52 3co5_A Putative two-component 71.5 0.73 2.5E-05 34.1 -0.3 13 2-14 32-44 (143)
53 3n70_A Transport activator; si 70.9 0.91 3.1E-05 33.7 0.2 13 2-14 29-41 (145)
54 2chg_A Replication factor C sm 70.8 0.85 2.9E-05 35.6 -0.0 13 2-14 43-55 (226)
55 1kgd_A CASK, peripheral plasma 70.7 0.84 2.9E-05 35.2 -0.1 12 3-14 11-22 (180)
56 1p9r_A General secretion pathw 70.6 0.85 2.9E-05 40.6 -0.1 12 3-14 173-184 (418)
57 4b4t_M 26S protease regulatory 69.7 2 6.9E-05 38.4 2.1 43 2-44 220-275 (434)
58 4b4t_J 26S protease regulatory 69.6 2.6 8.9E-05 37.3 2.8 44 2-45 187-243 (405)
59 1in4_A RUVB, holliday junction 69.6 0.93 3.2E-05 38.8 -0.0 12 3-14 57-68 (334)
60 2oap_1 GSPE-2, type II secreti 69.5 0.91 3.1E-05 41.6 -0.1 12 3-14 266-277 (511)
61 3h4m_A Proteasome-activating n 69.2 0.99 3.4E-05 37.3 0.0 13 2-14 56-68 (285)
62 2ewv_A Twitching motility prot 68.6 1 3.5E-05 39.4 0.0 12 3-14 142-153 (372)
63 1d2n_A N-ethylmaleimide-sensit 68.6 1 3.5E-05 37.2 -0.0 13 2-14 69-81 (272)
64 4b4t_L 26S protease subunit RP 68.2 3.2 0.00011 37.2 3.1 43 2-44 220-275 (437)
65 3syl_A Protein CBBX; photosynt 67.9 1 3.5E-05 37.7 -0.2 13 2-14 72-84 (309)
66 3cf0_A Transitional endoplasmi 67.8 1.1 3.7E-05 37.8 0.0 13 2-14 54-66 (301)
67 3c8u_A Fructokinase; YP_612366 67.6 1.2 4E-05 35.2 0.1 12 3-14 28-39 (208)
68 1sxj_C Activator 1 40 kDa subu 67.6 1.1 3.8E-05 38.3 0.0 13 2-14 51-63 (340)
69 1ofh_A ATP-dependent HSL prote 67.5 1.1 3.7E-05 37.4 -0.1 13 2-14 55-67 (310)
70 1znw_A Guanylate kinase, GMP k 67.3 1.1 3.8E-05 35.3 -0.0 12 3-14 26-37 (207)
71 2x8a_A Nuclear valosin-contain 67.2 1.1 3.8E-05 37.3 -0.1 39 2-40 49-100 (274)
72 1ye8_A Protein THEP1, hypothet 66.8 1.1 3.9E-05 34.7 -0.1 12 3-14 6-17 (178)
73 2z4s_A Chromosomal replication 66.1 1.2 4.2E-05 39.8 0.0 13 2-14 135-147 (440)
74 4b3f_X DNA-binding protein smu 66.1 1.2 4.1E-05 41.9 -0.1 12 3-14 211-222 (646)
75 3tau_A Guanylate kinase, GMP k 66.0 1.2 4.1E-05 35.2 -0.1 12 3-14 14-25 (208)
76 3b9p_A CG5977-PA, isoform A; A 65.8 1.3 4.3E-05 37.0 -0.0 13 2-14 59-71 (297)
77 1z6g_A Guanylate kinase; struc 65.7 1.2 4.3E-05 35.5 -0.0 12 3-14 29-40 (218)
78 3llm_A ATP-dependent RNA helic 65.6 1.1 3.7E-05 36.1 -0.4 13 2-14 81-93 (235)
79 3lnc_A Guanylate kinase, GMP k 65.6 1.4 4.8E-05 35.3 0.2 12 3-14 33-44 (231)
80 3t15_A Ribulose bisphosphate c 65.4 1.3 4.4E-05 37.2 -0.0 13 2-14 41-53 (293)
81 1njg_A DNA polymerase III subu 64.8 1.3 4.5E-05 34.9 -0.1 13 2-14 50-62 (250)
82 3eie_A Vacuolar protein sortin 63.8 1.4 4.9E-05 37.4 -0.0 42 2-43 56-110 (322)
83 3asz_A Uridine kinase; cytidin 63.6 1.4 4.8E-05 34.6 -0.1 12 3-14 12-23 (211)
84 3te6_A Regulatory protein SIR3 63.5 1.1 3.7E-05 38.4 -0.9 13 2-14 50-62 (318)
85 1xwi_A SKD1 protein; VPS4B, AA 63.3 1.5 5.1E-05 37.4 -0.0 41 2-42 50-104 (322)
86 1g8p_A Magnesium-chelatase 38 63.3 1.6 5.4E-05 37.1 0.2 13 2-14 50-62 (350)
87 1tue_A Replication protein E1; 63.1 1.4 4.9E-05 35.3 -0.1 13 2-14 63-75 (212)
88 2gza_A Type IV secretion syste 63.1 1.5 5E-05 38.2 -0.1 12 3-14 181-192 (361)
89 2bjv_A PSP operon transcriptio 62.3 1.6 5.3E-05 35.8 -0.1 13 2-14 34-46 (265)
90 4b4t_H 26S protease regulatory 62.2 4.4 0.00015 36.5 2.8 43 2-44 248-303 (467)
91 2ehv_A Hypothetical protein PH 62.0 1.6 5.4E-05 35.1 -0.1 12 3-14 36-47 (251)
92 2j41_A Guanylate kinase; GMP, 61.7 1.6 5.6E-05 33.9 -0.1 12 3-14 12-23 (207)
93 3tif_A Uncharacterized ABC tra 61.3 1.7 5.8E-05 35.3 -0.0 12 3-14 37-48 (235)
94 2pt7_A CAG-ALFA; ATPase, prote 61.0 1.6 5.6E-05 37.4 -0.2 12 3-14 177-188 (330)
95 1zp6_A Hypothetical protein AT 61.0 1.6 5.6E-05 33.5 -0.2 12 3-14 15-26 (191)
96 4b4t_I 26S protease regulatory 60.9 4.9 0.00017 35.9 2.9 43 2-44 221-276 (437)
97 1sxj_E Activator 1 40 kDa subu 60.8 1.7 5.9E-05 37.0 -0.0 12 3-14 42-53 (354)
98 1f2t_A RAD50 ABC-ATPase; DNA d 60.8 1.7 5.9E-05 32.5 -0.1 12 3-14 29-40 (149)
99 3b9q_A Chloroplast SRP recepto 60.8 1.7 5.8E-05 36.8 -0.1 12 3-14 106-117 (302)
100 4a74_A DNA repair and recombin 60.5 1.7 5.8E-05 34.4 -0.1 12 3-14 31-42 (231)
101 2v1u_A Cell division control p 60.4 1.8 6.2E-05 37.1 -0.0 13 2-14 49-61 (387)
102 2bdt_A BH3686; alpha-beta prot 60.2 1.8 6.2E-05 33.3 -0.0 12 3-14 8-19 (189)
103 3kta_A Chromosome segregation 60.2 1.7 5.9E-05 33.2 -0.2 12 3-14 32-43 (182)
104 1rj9_A FTSY, signal recognitio 59.9 1.8 6.3E-05 36.7 -0.0 12 3-14 108-119 (304)
105 3b85_A Phosphate starvation-in 59.6 2.2 7.5E-05 34.0 0.4 12 3-14 28-39 (208)
106 4fcw_A Chaperone protein CLPB; 58.8 2 6.8E-05 35.9 -0.0 12 3-14 53-64 (311)
107 1s96_A Guanylate kinase, GMP k 58.4 2 6.8E-05 34.5 -0.1 12 3-14 22-33 (219)
108 1vec_A ATP-dependent RNA helic 58.0 2 6.8E-05 33.4 -0.2 13 2-14 45-57 (206)
109 3lw7_A Adenylate kinase relate 57.7 2.3 7.7E-05 31.8 0.1 12 3-14 7-18 (179)
110 3uk6_A RUVB-like 2; hexameric 57.7 2.1 7E-05 36.8 -0.1 13 2-14 75-87 (368)
111 2gxq_A Heat resistant RNA depe 56.4 2.1 7.1E-05 33.3 -0.3 13 2-14 43-55 (207)
112 2i3b_A HCR-ntpase, human cance 56.3 2.3 7.8E-05 33.3 -0.1 12 3-14 7-18 (189)
113 1e9r_A Conjugal transfer prote 56.3 2 6.7E-05 38.1 -0.5 13 2-14 58-70 (437)
114 1qde_A EIF4A, translation init 56.3 2.1 7.2E-05 33.8 -0.3 12 2-13 56-67 (224)
115 1hqc_A RUVB; extended AAA-ATPa 56.2 2.5 8.5E-05 35.5 0.1 13 2-14 43-55 (324)
116 2w0m_A SSO2452; RECA, SSPF, un 56.0 2.3 8E-05 33.5 -0.0 12 3-14 29-40 (235)
117 1sxj_D Activator 1 41 kDa subu 56.0 2.4 8E-05 36.0 -0.0 13 2-14 63-75 (353)
118 2jeo_A Uridine-cytidine kinase 55.9 2.4 8.1E-05 34.4 -0.0 12 3-14 31-42 (245)
119 2pcj_A ABC transporter, lipopr 55.8 2.2 7.7E-05 34.3 -0.2 12 3-14 36-47 (224)
120 3e70_C DPA, signal recognition 55.8 2.4 8E-05 36.4 -0.1 12 3-14 135-146 (328)
121 1fnn_A CDC6P, cell division co 55.8 2.4 8.1E-05 36.5 -0.1 13 2-14 49-61 (389)
122 1um8_A ATP-dependent CLP prote 55.3 2.4 8.3E-05 36.7 -0.1 13 2-14 77-89 (376)
123 3gfo_A Cobalt import ATP-bindi 55.3 2.4 8.3E-05 35.3 -0.1 12 3-14 40-51 (275)
124 2qp9_X Vacuolar protein sortin 55.2 2.4 8.4E-05 36.6 -0.1 13 2-14 89-101 (355)
125 2r44_A Uncharacterized protein 55.1 1.9 6.3E-05 36.6 -0.9 13 2-14 51-63 (331)
126 3aez_A Pantothenate kinase; tr 55.0 2.5 8.4E-05 36.0 -0.1 12 3-14 96-107 (312)
127 4g1u_C Hemin import ATP-bindin 54.9 2.5 8.4E-05 35.1 -0.1 12 3-14 43-54 (266)
128 1kag_A SKI, shikimate kinase I 54.9 2.7 9.2E-05 31.7 0.1 12 3-14 10-21 (173)
129 2orw_A Thymidine kinase; TMTK, 54.7 2.4 8.4E-05 32.9 -0.1 13 2-14 8-20 (184)
130 3pfi_A Holliday junction ATP-d 54.4 2.6 8.9E-05 35.7 -0.0 13 2-14 60-72 (338)
131 2onk_A Molybdate/tungstate ABC 54.2 2.6 8.9E-05 34.4 -0.1 12 3-14 30-41 (240)
132 3d8b_A Fidgetin-like protein 1 54.1 2.6 9E-05 36.3 -0.0 13 2-14 122-134 (357)
133 1w36_D RECD, exodeoxyribonucle 54.1 2.3 7.9E-05 39.7 -0.4 13 2-14 169-181 (608)
134 1n0w_A DNA repair protein RAD5 54.1 2.6 8.9E-05 33.6 -0.1 12 3-14 30-41 (243)
135 2chq_A Replication factor C sm 54.1 2.7 9.2E-05 35.0 0.0 13 2-14 43-55 (319)
136 2og2_A Putative signal recogni 53.8 2.6 9E-05 36.6 -0.1 12 3-14 163-174 (359)
137 3b6e_A Interferon-induced heli 53.7 1.5 5.1E-05 34.2 -1.6 13 2-14 53-65 (216)
138 1qhx_A CPT, protein (chloramph 53.7 2.9 9.9E-05 31.6 0.1 12 3-14 9-20 (178)
139 3hws_A ATP-dependent CLP prote 53.7 2.8 9.7E-05 36.1 0.1 13 2-14 56-68 (363)
140 3uie_A Adenylyl-sulfate kinase 53.6 2.7 9.3E-05 32.8 -0.0 12 3-14 31-42 (200)
141 1htw_A HI0065; nucleotide-bind 53.4 2.7 9.4E-05 31.8 -0.0 12 3-14 39-50 (158)
142 3tqc_A Pantothenate kinase; bi 53.4 2.7 9.3E-05 35.9 -0.1 12 3-14 98-109 (321)
143 1sgw_A Putative ABC transporte 53.3 2.7 9.3E-05 33.6 -0.1 12 3-14 41-52 (214)
144 2qby_A CDC6 homolog 1, cell di 53.0 2.7 9.2E-05 35.9 -0.2 13 2-14 50-62 (386)
145 3kb2_A SPBC2 prophage-derived 52.7 3.2 0.00011 31.0 0.2 12 3-14 7-18 (173)
146 1xjc_A MOBB protein homolog; s 52.7 2.8 9.7E-05 32.3 -0.1 12 3-14 10-21 (169)
147 1ji0_A ABC transporter; ATP bi 52.6 2.9 9.8E-05 34.0 -0.0 12 3-14 38-49 (240)
148 1b0u_A Histidine permease; ABC 52.6 2.8 9.7E-05 34.6 -0.1 12 3-14 38-49 (262)
149 4ag6_A VIRB4 ATPase, type IV s 52.5 2.5 8.7E-05 36.9 -0.4 13 2-14 40-52 (392)
150 1iqp_A RFCS; clamp loader, ext 52.5 2.9 9.8E-05 35.0 -0.1 13 2-14 51-63 (327)
151 3rlf_A Maltose/maltodextrin im 52.4 2.9 9.9E-05 36.7 -0.1 12 3-14 35-46 (381)
152 1g6h_A High-affinity branched- 52.4 2.9 0.0001 34.3 -0.0 12 3-14 39-50 (257)
153 1ly1_A Polynucleotide kinase; 52.2 3.2 0.00011 31.3 0.1 12 3-14 8-19 (181)
154 2ff7_A Alpha-hemolysin translo 52.2 2.9 0.0001 34.1 -0.0 12 3-14 41-52 (247)
155 3fvq_A Fe(3+) IONS import ATP- 52.2 2.9 9.8E-05 36.4 -0.1 12 3-14 36-47 (359)
156 2cbz_A Multidrug resistance-as 52.2 2.9 0.0001 33.9 -0.0 12 3-14 37-48 (237)
157 1mv5_A LMRA, multidrug resista 51.9 3 0.0001 34.0 -0.1 12 3-14 34-45 (243)
158 3bor_A Human initiation factor 51.8 2.1 7.1E-05 34.4 -1.0 13 2-14 72-84 (237)
159 1xx6_A Thymidine kinase; NESG, 51.6 3 0.0001 32.7 -0.0 12 3-14 14-25 (191)
160 2gk6_A Regulator of nonsense t 51.6 3 0.0001 39.0 -0.1 12 3-14 201-212 (624)
161 1knq_A Gluconate kinase; ALFA/ 51.5 3 0.0001 31.5 -0.1 12 3-14 14-25 (175)
162 3sop_A Neuronal-specific septi 51.4 3 0.0001 34.6 -0.1 12 3-14 8-19 (270)
163 3fmo_B ATP-dependent RNA helic 51.3 2.9 9.8E-05 35.2 -0.3 13 2-14 136-148 (300)
164 2yyz_A Sugar ABC transporter, 51.1 3.1 0.00011 36.2 -0.0 12 3-14 35-46 (359)
165 1rz3_A Hypothetical protein rb 51.1 3 0.0001 32.6 -0.2 12 3-14 28-39 (201)
166 2pl3_A Probable ATP-dependent 51.1 2.9 9.8E-05 33.4 -0.3 13 2-14 67-79 (236)
167 2qby_B CDC6 homolog 3, cell di 51.0 3 0.0001 35.8 -0.2 13 2-14 50-62 (384)
168 4eun_A Thermoresistant glucoki 50.9 3.1 0.00011 32.4 -0.1 12 3-14 35-46 (200)
169 2c9o_A RUVB-like 1; hexameric 50.8 3.3 0.00011 37.0 0.1 13 2-14 68-80 (456)
170 2pze_A Cystic fibrosis transme 50.8 3.2 0.00011 33.5 -0.1 12 3-14 40-51 (229)
171 1jjv_A Dephospho-COA kinase; P 50.7 3.2 0.00011 32.4 -0.1 12 3-14 8-19 (206)
172 3ly5_A ATP-dependent RNA helic 50.6 3 0.0001 34.2 -0.3 13 2-14 96-108 (262)
173 1vpl_A ABC transporter, ATP-bi 50.4 3.2 0.00011 34.1 -0.1 12 3-14 47-58 (256)
174 2zan_A Vacuolar protein sortin 50.4 3.3 0.00011 37.0 -0.0 13 2-14 172-184 (444)
175 1cke_A CK, MSSA, protein (cyti 50.3 3.5 0.00012 32.5 0.1 12 3-14 11-22 (227)
176 2yz2_A Putative ABC transporte 50.2 3.3 0.00011 34.2 -0.0 12 3-14 39-50 (266)
177 1z47_A CYSA, putative ABC-tran 50.1 3.3 0.00011 35.9 -0.0 12 3-14 47-58 (355)
178 3vfd_A Spastin; ATPase, microt 50.1 3.3 0.00011 36.1 -0.1 13 2-14 153-165 (389)
179 2px0_A Flagellar biosynthesis 50.0 3.2 0.00011 34.9 -0.1 12 3-14 111-122 (296)
180 2f1r_A Molybdopterin-guanine d 49.9 2 6.9E-05 33.1 -1.3 12 3-14 8-19 (171)
181 2ghi_A Transport protein; mult 49.8 3.4 0.00012 34.1 -0.0 12 3-14 52-63 (260)
182 2olj_A Amino acid ABC transpor 49.7 3.4 0.00012 34.2 -0.1 12 3-14 56-67 (263)
183 2d2e_A SUFC protein; ABC-ATPas 49.7 3.4 0.00012 33.8 -0.0 12 3-14 35-46 (250)
184 1sq5_A Pantothenate kinase; P- 49.7 3.3 0.00011 35.0 -0.2 12 3-14 86-97 (308)
185 3iuy_A Probable ATP-dependent 49.7 3.1 0.00011 33.0 -0.3 13 2-14 62-74 (228)
186 3u61_B DNA polymerase accessor 49.7 3.4 0.00012 34.7 -0.0 13 2-14 53-65 (324)
187 2it1_A 362AA long hypothetical 49.6 3.4 0.00012 36.0 -0.1 12 3-14 35-46 (362)
188 2qor_A Guanylate kinase; phosp 49.5 3.7 0.00013 32.1 0.1 12 3-14 18-29 (204)
189 3trf_A Shikimate kinase, SK; a 49.5 3.8 0.00013 31.2 0.2 12 3-14 11-22 (185)
190 1g29_1 MALK, maltose transport 49.3 3.5 0.00012 36.0 -0.0 12 3-14 35-46 (372)
191 2ze6_A Isopentenyl transferase 49.3 3.7 0.00013 33.5 0.2 13 2-14 6-18 (253)
192 2nq2_C Hypothetical ABC transp 49.0 3.6 0.00012 33.8 -0.0 12 3-14 37-48 (253)
193 1np6_A Molybdopterin-guanine d 48.8 3.5 0.00012 31.8 -0.1 12 3-14 12-23 (174)
194 3qks_A DNA double-strand break 48.7 3.6 0.00012 32.4 -0.1 12 3-14 29-40 (203)
195 1v43_A Sugar-binding transport 48.7 3.6 0.00012 36.0 -0.1 12 3-14 43-54 (372)
196 2cvh_A DNA repair and recombin 48.6 3.6 0.00012 32.1 -0.0 12 3-14 26-37 (220)
197 2qi9_C Vitamin B12 import ATP- 48.5 3.6 0.00012 33.7 -0.1 12 3-14 32-43 (249)
198 3ney_A 55 kDa erythrocyte memb 48.5 3.6 0.00012 32.5 -0.1 12 3-14 25-36 (197)
199 2b8t_A Thymidine kinase; deoxy 48.2 3.7 0.00013 33.1 -0.1 12 3-14 18-29 (223)
200 3iij_A Coilin-interacting nucl 48.2 4 0.00014 31.0 0.2 13 2-14 16-28 (180)
201 2pjz_A Hypothetical protein ST 47.9 3.7 0.00013 33.9 -0.1 12 3-14 36-47 (263)
202 2bbw_A Adenylate kinase 4, AK4 47.9 3.7 0.00013 33.1 -0.1 12 3-14 33-44 (246)
203 3fe2_A Probable ATP-dependent 47.6 3.4 0.00012 33.2 -0.4 13 2-14 71-83 (242)
204 2ixe_A Antigen peptide transpo 47.6 3.8 0.00013 34.0 -0.0 12 3-14 51-62 (271)
205 3dkp_A Probable ATP-dependent 47.4 3.5 0.00012 33.0 -0.3 13 2-14 71-83 (245)
206 2ihy_A ABC transporter, ATP-bi 47.3 3.9 0.00013 34.1 -0.1 12 3-14 53-64 (279)
207 3pvs_A Replication-associated 47.1 3.9 0.00014 36.6 -0.0 13 2-14 55-67 (447)
208 2zu0_C Probable ATP-dependent 47.1 3.9 0.00013 33.8 -0.1 12 3-14 52-63 (267)
209 1jr3_A DNA polymerase III subu 47.1 3.9 0.00013 34.9 -0.1 13 2-14 43-55 (373)
210 2dhr_A FTSH; AAA+ protein, hex 47.0 4 0.00014 37.1 0.0 40 2-41 69-121 (499)
211 1kht_A Adenylate kinase; phosp 46.9 4.3 0.00015 30.9 0.1 12 3-14 9-20 (192)
212 3gd7_A Fusion complex of cysti 46.7 3.9 0.00013 36.0 -0.1 12 3-14 53-64 (390)
213 2v9p_A Replication protein E1; 46.6 4.2 0.00014 34.5 0.0 12 3-14 132-143 (305)
214 1sxj_B Activator 1 37 kDa subu 46.5 4.1 0.00014 33.9 -0.0 13 2-14 47-59 (323)
215 3hu3_A Transitional endoplasmi 46.5 4.1 0.00014 37.0 -0.0 13 2-14 243-255 (489)
216 4e22_A Cytidylate kinase; P-lo 46.4 4.1 0.00014 33.2 -0.1 29 3-34 33-67 (252)
217 3upu_A ATP-dependent DNA helic 46.3 4.1 0.00014 36.5 -0.1 13 2-14 50-62 (459)
218 1ojl_A Transcriptional regulat 46.3 4.3 0.00015 34.2 0.1 13 2-14 30-42 (304)
219 3d31_A Sulfate/molybdate ABC t 46.0 3.1 0.00011 36.0 -0.9 12 3-14 32-43 (348)
220 1qhl_A Protein (cell division 45.9 3.1 0.00011 33.7 -0.9 12 3-14 33-44 (227)
221 1wrb_A DJVLGB; RNA helicase, D 45.6 4 0.00014 33.0 -0.3 13 2-14 65-77 (253)
222 1vma_A Cell division protein F 45.5 4.3 0.00015 34.4 -0.1 12 3-14 110-121 (306)
223 3t61_A Gluconokinase; PSI-biol 45.1 4.8 0.00016 31.2 0.1 12 3-14 24-35 (202)
224 1ex7_A Guanylate kinase; subst 44.8 4.5 0.00015 31.6 -0.1 12 3-14 7-18 (186)
225 1q0u_A Bstdead; DEAD protein, 44.7 3.1 0.00011 32.8 -1.0 13 2-14 46-58 (219)
226 1sxj_A Activator 1 95 kDa subu 44.7 4.5 0.00016 36.8 -0.0 13 2-14 82-94 (516)
227 3lfu_A DNA helicase II; SF1 he 44.7 4.3 0.00015 37.7 -0.2 12 3-14 28-39 (647)
228 3vaa_A Shikimate kinase, SK; s 44.7 4.9 0.00017 31.2 0.1 12 3-14 31-42 (199)
229 2r2a_A Uncharacterized protein 44.6 4.9 0.00017 31.7 0.2 12 3-14 11-22 (199)
230 3tui_C Methionine import ATP-b 44.4 4.6 0.00016 35.2 -0.1 12 3-14 60-71 (366)
231 3ber_A Probable ATP-dependent 44.3 4.2 0.00014 33.0 -0.3 13 2-14 85-97 (249)
232 3qf7_A RAD50; ABC-ATPase, ATPa 44.3 4.6 0.00016 35.0 -0.1 12 3-14 29-40 (365)
233 2rhm_A Putative kinase; P-loop 44.0 4.9 0.00017 30.6 0.1 12 3-14 11-22 (193)
234 2qt1_A Nicotinamide riboside k 44.0 4.5 0.00016 31.5 -0.1 12 3-14 27-38 (207)
235 1odf_A YGR205W, hypothetical 3 43.9 4.7 0.00016 33.8 -0.1 12 3-14 37-48 (290)
236 1oxx_K GLCV, glucose, ABC tran 43.9 3.1 0.00011 36.1 -1.2 12 3-14 37-48 (353)
237 3cm0_A Adenylate kinase; ATP-b 43.9 5.1 0.00017 30.4 0.1 12 3-14 10-21 (186)
238 2fz4_A DNA repair protein RAD2 43.7 4.3 0.00015 32.8 -0.3 13 2-14 113-125 (237)
239 2yhs_A FTSY, cell division pro 43.5 4.8 0.00017 36.6 -0.1 12 3-14 299-310 (503)
240 1gvn_B Zeta; postsegregational 43.4 5.6 0.00019 33.2 0.4 13 2-14 38-50 (287)
241 2oxc_A Probable ATP-dependent 43.3 4.5 0.00015 32.2 -0.3 13 2-14 66-78 (230)
242 2bbs_A Cystic fibrosis transme 43.3 4.7 0.00016 33.8 -0.1 12 3-14 70-81 (290)
243 1nij_A Hypothetical protein YJ 43.0 5.3 0.00018 33.8 0.1 12 3-14 10-21 (318)
244 2ce7_A Cell division protein F 42.8 5 0.00017 36.3 -0.1 13 2-14 54-66 (476)
245 3nh6_A ATP-binding cassette SU 42.7 3.8 0.00013 34.7 -0.8 12 3-14 86-97 (306)
246 2wjy_A Regulator of nonsense t 42.7 5 0.00017 38.8 -0.1 12 3-14 377-388 (800)
247 1e6c_A Shikimate kinase; phosp 42.6 5.5 0.00019 29.8 0.2 12 3-14 8-19 (173)
248 1y63_A LMAJ004144AAA protein; 42.2 5.7 0.00019 30.4 0.2 12 3-14 16-27 (184)
249 1u0j_A DNA replication protein 42.2 5.7 0.00019 33.0 0.2 13 2-14 109-121 (267)
250 1t6n_A Probable ATP-dependent 42.1 4.8 0.00016 31.6 -0.3 13 2-14 56-68 (220)
251 1nks_A Adenylate kinase; therm 41.9 5.5 0.00019 30.3 0.0 12 3-14 7-18 (194)
252 2xzl_A ATP-dependent helicase 41.7 5.4 0.00018 38.6 -0.0 13 2-14 380-392 (802)
253 1w5s_A Origin recognition comp 41.7 5.5 0.00019 34.5 -0.0 12 3-14 58-69 (412)
254 1tev_A UMP-CMP kinase; ploop, 41.7 5.8 0.0002 30.2 0.1 12 3-14 9-20 (196)
255 2vp4_A Deoxynucleoside kinase; 41.7 5.3 0.00018 31.9 -0.1 12 3-14 26-37 (230)
256 2jaq_A Deoxyguanosine kinase; 41.3 5.9 0.0002 30.4 0.1 12 3-14 6-17 (205)
257 2if2_A Dephospho-COA kinase; a 41.0 5.8 0.0002 30.7 0.1 12 3-14 7-18 (204)
258 1via_A Shikimate kinase; struc 41.0 6 0.0002 29.9 0.1 12 3-14 10-21 (175)
259 1hv8_A Putative ATP-dependent 41.0 5 0.00017 33.9 -0.4 13 2-14 49-61 (367)
260 3e1s_A Exodeoxyribonuclease V, 40.8 5.6 0.00019 36.9 -0.1 12 3-14 210-221 (574)
261 2bwj_A Adenylate kinase 5; pho 40.8 5.9 0.0002 30.4 0.1 12 3-14 18-29 (199)
262 2r8r_A Sensor protein; KDPD, P 40.7 5 0.00017 32.5 -0.4 13 2-14 11-23 (228)
263 1e69_A Chromosome segregation 40.6 6.6 0.00023 33.2 0.4 12 3-14 30-41 (322)
264 2dr3_A UPF0273 protein PH0284; 40.5 5.5 0.00019 31.6 -0.2 12 3-14 29-40 (247)
265 1w4r_A Thymidine kinase; type 40.4 5.5 0.00019 31.5 -0.2 13 2-14 25-37 (195)
266 3fb4_A Adenylate kinase; psych 40.4 6.3 0.00021 30.8 0.2 12 3-14 6-17 (216)
267 3qkt_A DNA double-strand break 40.3 5.8 0.0002 33.9 -0.1 12 3-14 29-40 (339)
268 2pbr_A DTMP kinase, thymidylat 40.2 6.3 0.00022 30.0 0.1 12 3-14 6-17 (195)
269 2iut_A DNA translocase FTSK; n 40.2 5.2 0.00018 37.1 -0.4 13 2-14 219-231 (574)
270 3m6a_A ATP-dependent protease 39.8 6.1 0.00021 36.3 0.0 13 2-14 113-125 (543)
271 2pt5_A Shikimate kinase, SK; a 39.7 6.5 0.00022 29.3 0.1 12 3-14 6-17 (168)
272 1c9k_A COBU, adenosylcobinamid 39.6 5.8 0.0002 30.9 -0.2 16 212-229 140-155 (180)
273 2vli_A Antibiotic resistance p 39.6 6.8 0.00023 29.6 0.2 12 3-14 11-22 (183)
274 2jlq_A Serine protease subunit 39.6 7.3 0.00025 34.7 0.5 12 2-13 24-35 (451)
275 2c95_A Adenylate kinase 1; tra 39.6 6.3 0.00022 30.1 0.1 12 3-14 15-26 (196)
276 1uf9_A TT1252 protein; P-loop, 39.6 6.3 0.00021 30.3 0.0 12 3-14 14-25 (203)
277 3fmp_B ATP-dependent RNA helic 39.5 5.8 0.0002 35.4 -0.2 12 2-13 136-147 (479)
278 2iyv_A Shikimate kinase, SK; t 39.4 6.7 0.00023 29.8 0.2 12 3-14 8-19 (184)
279 2pez_A Bifunctional 3'-phospho 39.3 6.1 0.00021 29.9 -0.1 12 3-14 11-22 (179)
280 2z0h_A DTMP kinase, thymidylat 39.1 6.8 0.00023 29.9 0.2 12 3-14 6-17 (197)
281 2v6i_A RNA helicase; membrane, 39.1 7.4 0.00025 34.5 0.4 13 2-14 7-19 (431)
282 2p5t_B PEZT; postsegregational 39.0 6.7 0.00023 31.8 0.1 12 3-14 38-49 (253)
283 1qf9_A UMP/CMP kinase, protein 39.0 6.6 0.00022 29.8 0.1 12 3-14 12-23 (194)
284 1a7j_A Phosphoribulokinase; tr 38.9 7.4 0.00025 32.5 0.4 11 4-14 12-22 (290)
285 1nlf_A Regulatory protein REPA 38.7 6.2 0.00021 32.5 -0.1 12 3-14 36-47 (279)
286 3dl0_A Adenylate kinase; phosp 38.6 7 0.00024 30.6 0.2 12 3-14 6-17 (216)
287 1ukz_A Uridylate kinase; trans 38.2 7.1 0.00024 30.1 0.2 12 3-14 21-32 (203)
288 3auy_A DNA double-strand break 38.2 6.3 0.00022 34.1 -0.2 12 3-14 31-42 (371)
289 1u0l_A Probable GTPase ENGC; p 37.7 6.8 0.00023 32.9 -0.0 12 3-14 175-186 (301)
290 3pey_A ATP-dependent RNA helic 37.7 5.9 0.0002 33.8 -0.4 13 2-14 49-61 (395)
291 3nbx_X ATPase RAVA; AAA+ ATPas 37.6 6.9 0.00024 35.6 -0.0 13 2-14 46-58 (500)
292 1yks_A Genome polyprotein [con 37.4 8.2 0.00028 34.3 0.5 13 2-14 13-25 (440)
293 2ius_A DNA translocase FTSK; n 37.3 6.1 0.00021 36.1 -0.4 13 2-14 172-184 (512)
294 1vht_A Dephospho-COA kinase; s 37.2 7.5 0.00026 30.5 0.1 12 3-14 10-21 (218)
295 2o5v_A DNA replication and rep 37.1 7 0.00024 33.9 -0.1 12 3-14 32-43 (359)
296 2grj_A Dephospho-COA kinase; T 37.1 7.6 0.00026 30.3 0.2 12 3-14 18-29 (192)
297 3kl4_A SRP54, signal recogniti 36.8 7 0.00024 34.9 -0.1 12 3-14 103-114 (433)
298 2z83_A Helicase/nucleoside tri 36.6 8.6 0.00029 34.3 0.4 13 2-14 26-38 (459)
299 2plr_A DTMP kinase, probable t 36.3 7.9 0.00027 29.9 0.1 12 3-14 10-21 (213)
300 3pxg_A Negative regulator of g 36.2 7.8 0.00027 34.8 0.1 13 2-14 206-218 (468)
301 2yv5_A YJEQ protein; hydrolase 36.2 7.4 0.00025 32.7 -0.0 12 3-14 171-182 (302)
302 1zu4_A FTSY; GTPase, signal re 36.2 7.4 0.00025 33.1 -0.0 12 3-14 111-122 (320)
303 3eiq_A Eukaryotic initiation f 36.1 7.7 0.00026 33.4 0.0 13 2-14 82-94 (414)
304 1zuh_A Shikimate kinase; alpha 36.0 8.1 0.00028 28.8 0.2 12 3-14 13-24 (168)
305 2z0m_A 337AA long hypothetical 35.9 6.6 0.00023 32.7 -0.4 13 2-14 36-48 (337)
306 1zd8_A GTP:AMP phosphotransfer 35.9 7.8 0.00027 30.7 0.1 12 3-14 13-24 (227)
307 3fht_A ATP-dependent RNA helic 35.5 7.1 0.00024 33.6 -0.3 13 2-14 69-81 (412)
308 1rif_A DAR protein, DNA helica 35.5 7.6 0.00026 31.9 -0.1 12 3-14 134-145 (282)
309 2fna_A Conserved hypothetical 35.4 7.5 0.00026 32.6 -0.1 13 2-14 35-47 (357)
310 1uaa_A REP helicase, protein ( 35.2 7.7 0.00026 36.4 -0.1 12 3-14 21-32 (673)
311 2yvu_A Probable adenylyl-sulfa 35.2 8.5 0.00029 29.3 0.1 12 3-14 19-30 (186)
312 3fho_A ATP-dependent RNA helic 35.0 8 0.00027 35.0 -0.0 12 2-13 163-174 (508)
313 1pzn_A RAD51, DNA repair and r 34.7 7.8 0.00027 33.3 -0.1 12 3-14 137-148 (349)
314 2v54_A DTMP kinase, thymidylat 34.5 8.8 0.0003 29.5 0.1 12 3-14 10-21 (204)
315 1gtv_A TMK, thymidylate kinase 34.5 5.2 0.00018 31.1 -1.2 12 3-14 6-17 (214)
316 3crm_A TRNA delta(2)-isopenten 34.4 8.8 0.0003 32.8 0.1 12 3-14 11-22 (323)
317 2i4i_A ATP-dependent RNA helic 34.2 7.3 0.00025 33.7 -0.4 13 2-14 57-69 (417)
318 1lw7_A Transcriptional regulat 34.2 7 0.00024 33.7 -0.6 12 3-14 176-187 (365)
319 3d3q_A TRNA delta(2)-isopenten 34.1 9.1 0.00031 33.0 0.2 12 3-14 13-24 (340)
320 1aky_A Adenylate kinase; ATP:A 34.0 9.1 0.00031 30.1 0.2 12 3-14 10-21 (220)
321 3ake_A Cytidylate kinase; CMP 33.9 9.2 0.00032 29.4 0.2 12 3-14 8-19 (208)
322 2wwf_A Thymidilate kinase, put 33.7 9 0.00031 29.7 0.1 12 3-14 16-27 (212)
323 3pxi_A Negative regulator of g 33.6 9 0.00031 36.6 0.1 13 2-14 526-538 (758)
324 3vkw_A Replicase large subunit 33.6 8.2 0.00028 34.6 -0.2 13 2-14 166-178 (446)
325 1zak_A Adenylate kinase; ATP:A 33.6 9.1 0.00031 30.1 0.1 12 3-14 11-22 (222)
326 2cdn_A Adenylate kinase; phosp 33.6 9.3 0.00032 29.5 0.1 12 3-14 26-37 (201)
327 3exa_A TRNA delta(2)-isopenten 33.5 9.7 0.00033 32.5 0.2 12 3-14 9-20 (322)
328 3a8t_A Adenylate isopentenyltr 33.5 9.8 0.00034 32.7 0.3 12 3-14 46-57 (339)
329 3a4m_A L-seryl-tRNA(SEC) kinas 33.4 9.4 0.00032 31.1 0.1 12 3-14 10-21 (260)
330 2qmh_A HPR kinase/phosphorylas 33.2 11 0.00037 30.0 0.5 12 3-14 40-51 (205)
331 3rc3_A ATP-dependent RNA helic 33.2 8.4 0.00029 36.5 -0.2 13 2-14 160-172 (677)
332 1uj2_A Uridine-cytidine kinase 33.1 9.6 0.00033 30.8 0.2 12 3-14 28-39 (252)
333 1pui_A ENGB, probable GTP-bind 32.9 8.6 0.00029 29.6 -0.2 12 3-14 32-43 (210)
334 2j0s_A ATP-dependent RNA helic 32.7 8 0.00027 33.4 -0.4 13 2-14 79-91 (410)
335 2obl_A ESCN; ATPase, hydrolase 32.6 8.8 0.0003 33.1 -0.2 12 3-14 77-88 (347)
336 1svm_A Large T antigen; AAA+ f 32.4 9.3 0.00032 33.4 -0.0 12 3-14 175-186 (377)
337 3r20_A Cytidylate kinase; stru 32.3 10 0.00034 30.7 0.1 32 3-34 15-49 (233)
338 1s2m_A Putative ATP-dependent 32.3 8.6 0.00029 33.0 -0.3 13 2-14 63-75 (400)
339 3oiy_A Reverse gyrase helicase 32.1 9.7 0.00033 33.1 0.0 13 2-14 41-53 (414)
340 1nn5_A Similar to deoxythymidy 32.1 9.9 0.00034 29.4 0.1 12 3-14 15-26 (215)
341 1e4v_A Adenylate kinase; trans 32.1 9.9 0.00034 29.7 0.1 12 3-14 6-17 (214)
342 3euj_A Chromosome partition pr 32.1 9.4 0.00032 34.6 -0.1 12 3-14 35-46 (483)
343 3foz_A TRNA delta(2)-isopenten 32.1 11 0.00036 32.2 0.2 12 3-14 16-27 (316)
344 3qf4_B Uncharacterized ABC tra 31.9 11 0.00038 35.0 0.4 12 3-14 387-398 (598)
345 4a82_A Cystic fibrosis transme 31.8 9.6 0.00033 35.2 -0.0 12 3-14 373-384 (578)
346 2f9l_A RAB11B, member RAS onco 31.7 9.7 0.00033 29.2 -0.0 12 3-14 11-22 (199)
347 2vhj_A Ntpase P4, P4; non- hyd 31.7 11 0.00036 32.4 0.2 13 2-14 128-140 (331)
348 1ypw_A Transitional endoplasmi 31.6 9.7 0.00033 36.8 -0.0 13 2-14 243-255 (806)
349 2yl4_A ATP-binding cassette SU 31.6 11 0.00039 34.8 0.4 12 3-14 376-387 (595)
350 1ak2_A Adenylate kinase isoenz 31.5 11 0.00036 30.1 0.2 12 3-14 22-33 (233)
351 2db3_A ATP-dependent RNA helic 31.4 9.2 0.00031 33.7 -0.3 13 2-14 98-110 (434)
352 1cr0_A DNA primase/helicase; R 31.3 9.6 0.00033 31.5 -0.1 12 3-14 41-52 (296)
353 3o8b_A HCV NS3 protease/helica 30.8 11 0.00038 35.6 0.2 13 2-14 237-249 (666)
354 3sr0_A Adenylate kinase; phosp 30.8 11 0.00038 29.7 0.2 13 2-14 5-17 (206)
355 1oix_A RAS-related protein RAB 30.7 9.9 0.00034 29.1 -0.2 12 3-14 35-46 (191)
356 3tlx_A Adenylate kinase 2; str 30.6 11 0.00038 30.3 0.1 12 3-14 35-46 (243)
357 1m7g_A Adenylylsulfate kinase; 30.6 10 0.00035 29.6 -0.0 12 3-14 31-42 (211)
358 2v3c_C SRP54, signal recogniti 30.5 12 0.00042 33.2 0.4 12 3-14 105-116 (432)
359 4aby_A DNA repair protein RECN 30.2 6.2 0.00021 34.5 -1.6 12 3-14 66-77 (415)
360 2xb4_A Adenylate kinase; ATP-b 30.2 11 0.00039 29.7 0.1 12 3-14 6-17 (223)
361 1r6b_X CLPA protein; AAA+, N-t 30.1 11 0.00039 35.8 0.1 13 2-14 493-505 (758)
362 2qm8_A GTPase/ATPase; G protei 30.0 11 0.00036 32.3 -0.1 12 3-14 61-72 (337)
363 1tq4_A IIGP1, interferon-induc 29.9 10 0.00036 33.5 -0.2 12 3-14 75-86 (413)
364 2qen_A Walker-type ATPase; unk 29.7 11 0.00037 31.5 -0.1 13 2-14 36-48 (350)
365 1ltq_A Polynucleotide kinase; 29.6 12 0.00041 30.9 0.1 12 3-14 8-19 (301)
366 3dm5_A SRP54, signal recogniti 29.6 11 0.00038 33.7 -0.1 12 3-14 106-117 (443)
367 1pjr_A PCRA; DNA repair, DNA r 29.5 11 0.00037 35.9 -0.2 12 3-14 30-41 (724)
368 3b5x_A Lipid A export ATP-bind 29.3 11 0.00038 34.7 -0.1 12 3-14 375-386 (582)
369 1v5w_A DMC1, meiotic recombina 29.1 11 0.00038 32.2 -0.1 13 2-14 127-139 (343)
370 3b60_A Lipid A export ATP-bind 29.0 11 0.00038 34.8 -0.2 12 3-14 375-386 (582)
371 2ged_A SR-beta, signal recogni 28.9 11 0.00039 28.4 -0.1 13 2-14 53-65 (193)
372 3ux8_A Excinuclease ABC, A sub 28.8 12 0.0004 35.3 -0.0 12 3-14 354-365 (670)
373 2ce2_X GTPase HRAS; signaling 28.8 11 0.00038 27.2 -0.1 13 2-14 8-20 (166)
374 2f6r_A COA synthase, bifunctio 28.8 12 0.00041 31.0 0.0 12 3-14 81-92 (281)
375 3qf4_A ABC transporter, ATP-bi 28.6 12 0.00041 34.6 0.0 12 3-14 375-386 (587)
376 3lda_A DNA repair protein RAD5 28.5 11 0.00039 33.1 -0.1 12 3-14 184-195 (400)
377 2dyk_A GTP-binding protein; GT 28.4 12 0.0004 27.1 -0.1 13 2-14 6-18 (161)
378 1qvr_A CLPB protein; coiled co 28.3 13 0.00045 36.0 0.2 13 2-14 593-605 (854)
379 1g41_A Heat shock protein HSLU 28.3 13 0.00044 33.3 0.2 13 2-14 55-67 (444)
380 3j16_B RLI1P; ribosome recycli 28.3 12 0.00041 34.9 -0.1 12 3-14 109-120 (608)
381 3ozx_A RNAse L inhibitor; ATP 28.3 12 0.00041 34.3 -0.1 12 3-14 31-42 (538)
382 2npi_A Protein CLP1; CLP1-PCF1 28.3 12 0.0004 33.7 -0.1 12 3-14 144-155 (460)
383 2z43_A DNA repair and recombin 28.3 12 0.0004 31.7 -0.1 13 2-14 112-124 (324)
384 1r6b_X CLPA protein; AAA+, N-t 28.2 12 0.00041 35.6 -0.1 41 2-42 212-277 (758)
385 2oca_A DAR protein, ATP-depend 27.8 11 0.00039 33.7 -0.3 13 2-14 133-145 (510)
386 3umf_A Adenylate kinase; rossm 27.8 12 0.0004 30.0 -0.2 13 2-14 34-46 (217)
387 2i1q_A DNA repair and recombin 27.8 13 0.00045 31.2 0.1 13 2-14 103-115 (322)
388 2fwr_A DNA repair protein RAD2 27.7 12 0.00039 33.3 -0.3 13 2-14 113-125 (472)
389 2rcn_A Probable GTPase ENGC; Y 27.6 12 0.00043 32.3 -0.1 12 3-14 221-232 (358)
390 3be4_A Adenylate kinase; malar 27.5 13 0.00045 29.1 0.1 12 3-14 11-22 (217)
391 1a5t_A Delta prime, HOLB; zinc 27.5 13 0.00045 31.5 0.1 13 2-14 29-41 (334)
392 2qag_B Septin-6, protein NEDD5 27.5 14 0.00047 32.9 0.2 12 3-14 48-59 (427)
393 2xau_A PRE-mRNA-splicing facto 27.4 11 0.00039 36.2 -0.4 13 2-14 114-126 (773)
394 1fuu_A Yeast initiation factor 27.3 9.1 0.00031 32.7 -1.0 12 2-13 63-74 (394)
395 2zr9_A Protein RECA, recombina 27.3 12 0.00042 32.1 -0.1 13 2-14 66-78 (349)
396 3h1t_A Type I site-specific re 27.2 11 0.00038 34.6 -0.5 12 3-14 204-215 (590)
397 3i5x_A ATP-dependent RNA helic 27.1 12 0.00041 34.0 -0.3 12 2-13 116-127 (563)
398 3szr_A Interferon-induced GTP- 27.1 13 0.00044 34.7 -0.1 12 3-14 51-62 (608)
399 1w36_B RECB, exodeoxyribonucle 27.1 13 0.00043 37.6 -0.2 10 5-14 24-33 (1180)
400 1j8m_F SRP54, signal recogniti 27.1 16 0.00053 30.7 0.4 12 3-14 104-115 (297)
401 1ypw_A Transitional endoplasmi 26.9 14 0.00046 35.8 0.0 13 2-14 516-528 (806)
402 3tqf_A HPR(Ser) kinase; transf 26.9 14 0.00047 28.7 0.1 12 3-14 22-33 (181)
403 3k1j_A LON protease, ATP-depen 26.9 13 0.00045 34.5 -0.1 13 2-14 65-77 (604)
404 3hr8_A Protein RECA; alpha and 26.6 13 0.00045 32.2 -0.1 12 3-14 67-78 (356)
405 1w1w_A Structural maintenance 26.5 14 0.00046 32.6 -0.0 12 3-14 32-43 (430)
406 2whx_A Serine protease/ntpase/ 26.4 16 0.00055 34.1 0.5 13 2-14 191-203 (618)
407 1yqt_A RNAse L inhibitor; ATP- 26.3 14 0.00047 33.9 -0.1 12 3-14 53-64 (538)
408 2dpy_A FLII, flagellum-specifi 26.2 13 0.00045 33.1 -0.2 12 3-14 163-174 (438)
409 3nwj_A ATSK2; P loop, shikimat 25.9 14 0.00048 30.2 -0.1 12 3-14 54-65 (250)
410 2wsm_A Hydrogenase expression/ 25.7 14 0.00046 28.8 -0.2 12 3-14 36-47 (221)
411 1nrj_B SR-beta, signal recogni 25.5 14 0.00049 28.5 -0.0 13 2-14 17-29 (218)
412 1xti_A Probable ATP-dependent 25.5 14 0.00047 31.5 -0.2 13 2-14 50-62 (391)
413 2wji_A Ferrous iron transport 25.4 15 0.0005 27.2 -0.0 12 3-14 9-20 (165)
414 2va8_A SSO2462, SKI2-type heli 25.4 13 0.00044 35.1 -0.4 13 2-14 51-63 (715)
415 1z2a_A RAS-related protein RAB 25.2 15 0.0005 26.8 -0.0 12 3-14 11-22 (168)
416 2www_A Methylmalonic aciduria 25.2 15 0.0005 31.6 -0.1 12 3-14 80-91 (349)
417 2qnr_A Septin-2, protein NEDD5 25.1 13 0.00044 31.2 -0.5 12 3-14 24-35 (301)
418 1tf7_A KAIC; homohexamer, hexa 25.0 15 0.0005 33.5 -0.1 12 3-14 45-56 (525)
419 3ux8_A Excinuclease ABC, A sub 24.9 15 0.00052 34.5 -0.0 12 3-14 50-61 (670)
420 3pxi_A Negative regulator of g 24.8 16 0.00055 34.8 0.1 13 2-14 206-218 (758)
421 3eph_A TRNA isopentenyltransfe 24.7 17 0.00058 32.1 0.2 12 3-14 8-19 (409)
422 1qvr_A CLPB protein; coiled co 24.6 15 0.0005 35.7 -0.2 13 2-14 196-208 (854)
423 2qag_C Septin-7; cell cycle, c 24.4 16 0.00053 32.4 -0.1 12 3-14 37-48 (418)
424 3u4q_A ATP-dependent helicase/ 24.1 15 0.00052 37.2 -0.2 11 4-14 30-40 (1232)
425 2zts_A Putative uncharacterize 23.9 18 0.00062 28.5 0.3 13 2-14 35-47 (251)
426 3lxx_A GTPase IMAP family memb 23.9 16 0.00055 29.0 -0.1 12 3-14 35-46 (239)
427 3bk7_A ABC transporter ATP-bin 23.9 16 0.00055 34.0 -0.1 12 3-14 123-134 (607)
428 1ls1_A Signal recognition part 23.7 16 0.00055 30.5 -0.1 12 3-14 104-115 (295)
429 2wjg_A FEOB, ferrous iron tran 23.7 16 0.00056 27.3 -0.0 12 3-14 13-24 (188)
430 1ek0_A Protein (GTP-binding pr 23.7 16 0.00056 26.5 -0.0 12 3-14 9-20 (170)
431 4eaq_A DTMP kinase, thymidylat 23.6 16 0.00056 29.1 -0.1 12 3-14 32-43 (229)
432 1ky3_A GTP-binding protein YPT 23.4 17 0.00057 26.9 -0.1 12 3-14 14-25 (182)
433 2xtp_A GTPase IMAP family memb 23.2 16 0.00055 29.4 -0.2 12 3-14 28-39 (260)
434 1u8z_A RAS-related protein RAL 23.1 17 0.00059 26.3 -0.0 12 3-14 10-21 (168)
435 1t9h_A YLOQ, probable GTPase E 23.1 9.1 0.00031 32.4 -1.8 12 3-14 179-190 (307)
436 2h92_A Cytidylate kinase; ross 23.0 19 0.00064 28.1 0.1 12 3-14 9-20 (219)
437 1svi_A GTP-binding protein YSX 22.9 16 0.00056 27.5 -0.2 12 3-14 29-40 (195)
438 3cf2_A TER ATPase, transitiona 22.9 18 0.00063 34.9 0.1 43 2-44 243-298 (806)
439 2zj8_A DNA helicase, putative 22.8 15 0.00052 34.7 -0.5 13 2-14 44-56 (720)
440 1z0j_A RAB-22, RAS-related pro 22.7 17 0.0006 26.4 -0.1 12 3-14 12-23 (170)
441 3ozx_A RNAse L inhibitor; ATP 22.5 18 0.00061 33.2 -0.1 12 3-14 300-311 (538)
442 3pqc_A Probable GTP-binding pr 22.5 17 0.00057 27.3 -0.2 12 3-14 29-40 (195)
443 2olr_A Phosphoenolpyruvate car 22.4 19 0.00065 33.0 0.1 13 2-14 246-258 (540)
444 3tbk_A RIG-I helicase domain; 22.3 17 0.00057 32.6 -0.3 13 2-14 24-36 (555)
445 1zcb_A G alpha I/13; GTP-bindi 22.3 15 0.00053 31.7 -0.5 13 2-14 38-50 (362)
446 3cf2_A TER ATPase, transitiona 22.2 19 0.00066 34.8 0.1 56 2-63 516-584 (806)
447 1g16_A RAS-related protein SEC 22.2 18 0.0006 26.4 -0.1 12 3-14 9-20 (170)
448 3u4q_B ATP-dependent helicase/ 22.0 16 0.00055 36.8 -0.5 13 2-14 6-18 (1166)
449 1kao_A RAP2A; GTP-binding prot 21.9 19 0.00063 26.0 -0.1 12 3-14 9-20 (167)
450 2erx_A GTP-binding protein DI- 21.8 19 0.00064 26.2 -0.1 12 3-14 9-20 (172)
451 4a2p_A RIG-I, retinoic acid in 21.6 18 0.0006 32.5 -0.3 13 2-14 27-39 (556)
452 1c1y_A RAS-related protein RAP 21.5 19 0.00066 26.0 -0.0 12 3-14 9-20 (167)
453 1r2q_A RAS-related protein RAB 21.5 19 0.00066 26.1 -0.0 12 3-14 12-23 (170)
454 1ii2_A Phosphoenolpyruvate car 21.5 20 0.00069 32.7 0.1 13 2-14 218-230 (524)
455 2lkc_A Translation initiation 21.5 19 0.00064 26.5 -0.1 12 3-14 14-25 (178)
456 1q3t_A Cytidylate kinase; nucl 21.4 21 0.00073 28.3 0.2 12 3-14 22-33 (236)
457 1wms_A RAB-9, RAB9, RAS-relate 21.3 19 0.00066 26.4 -0.1 12 3-14 13-24 (177)
458 1wp9_A ATP-dependent RNA helic 21.3 17 0.00059 31.5 -0.4 13 2-14 28-40 (494)
459 1ytm_A Phosphoenolpyruvate car 21.1 21 0.00071 32.7 0.1 12 3-14 241-252 (532)
460 1z08_A RAS-related protein RAB 21.0 20 0.00067 26.1 -0.1 12 3-14 12-23 (170)
461 3io5_A Recombination and repai 21.0 21 0.00073 30.5 0.1 13 2-14 33-45 (333)
462 3sqw_A ATP-dependent RNA helic 20.9 19 0.00064 33.0 -0.3 12 2-13 65-76 (579)
463 2fn4_A P23, RAS-related protei 20.8 19 0.00066 26.5 -0.2 12 3-14 15-26 (181)
464 1gm5_A RECG; helicase, replica 20.7 19 0.00067 34.6 -0.2 13 2-14 394-406 (780)
465 2ffh_A Protein (FFH); SRP54, s 20.7 20 0.0007 31.7 -0.1 12 3-14 104-115 (425)
466 1eaq_A RUNT-related transcript 20.5 31 0.001 24.9 0.8 12 3-14 92-103 (140)
467 2wv9_A Flavivirin protease NS2 20.4 24 0.00084 33.2 0.4 13 2-14 246-258 (673)
468 2hf9_A Probable hydrogenase ni 20.3 21 0.0007 27.8 -0.1 12 3-14 44-55 (226)
469 2y8e_A RAB-protein 6, GH09086P 20.2 21 0.00071 26.2 -0.1 12 3-14 20-31 (179)
470 3zvl_A Bifunctional polynucleo 20.1 20 0.0007 31.5 -0.2 13 2-14 263-275 (416)
471 1moz_A ARL1, ADP-ribosylation 20.0 19 0.00063 26.8 -0.5 12 3-14 24-35 (183)
No 1
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=3.4e-71 Score=489.11 Aligned_cols=244 Identities=45% Similarity=0.703 Sum_probs=226.2
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK 76 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~ 76 (267)
||||||||||||||+|.+.++.+++|||||++++||..+... .+.|.+||+|||||+++|||+|....+.+++++.
T Consensus 85 fAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~~ 164 (355)
T 1goj_A 85 FAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKN 164 (355)
T ss_dssp EEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTCCSCCEEEETT
T ss_pred EEECCCCCCcceEeecCCCCCcccCCchHHHHHHHHHHHHhcccCceEEEEEEEEEEECCEEEEcccCccCCceeEEcCC
Confidence 799999999999999876666788999999999999987543 4589999999999999999999888999999987
Q ss_pred CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439 77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH 156 (267)
Q Consensus 77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (267)
.| +++.|+++++|.|++|++++|..|..+|..+++.+|..|||||+||+|+|.+....
T Consensus 165 ~g-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------------- 222 (355)
T 1goj_A 165 RG-VYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVE--------------------- 222 (355)
T ss_dssp TE-EEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETT---------------------
T ss_pred CC-EeecCCEEEeCCCHHHHHHHHHHHHhhcCcccccCCCCCCCceEEEEEEEEEeccC---------------------
Confidence 55 89999999999999999999999999999999999999999999999999875321
Q ss_pred CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCCCCeEE
Q 024439 157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGSARTS 235 (267)
Q Consensus 157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g~~~~~ 235 (267)
.+....|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|+++ ..|||||+||||+||||+||||++|+
T Consensus 223 ~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~ 302 (355)
T 1goj_A 223 TGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTT 302 (355)
T ss_dssp TTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEE
T ss_pred CCceeeeEEEEEECCCCCcccccccchhhHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCccCHHHHHHHHHhCCCCcEE
Confidence 12356799999999999999999999999999999999999999999999986 47999999999999999999999999
Q ss_pred EEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 236 LIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
||+||+|+..+++||++||+||+|+++|+|.
T Consensus 303 mI~~isP~~~~~~ETl~TL~fA~rak~I~n~ 333 (355)
T 1goj_A 303 LIINCSPSSYNDAETLSTLRFGMRAKSIKNK 333 (355)
T ss_dssp EEEEECCBGGGHHHHHHHHHHHHHHHTCBCC
T ss_pred EEEEECcccccHHHHHHHHHHHHHHhhccCC
Confidence 9999999999999999999999999999985
No 2
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=1.9e-71 Score=485.73 Aligned_cols=240 Identities=41% Similarity=0.640 Sum_probs=221.9
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc----CCCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV----TSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK 76 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~ 76 (267)
||||||||||||||+|. .+++.++|||||++++||+.+.. ..+.|.+||+|||||+++|||++.+.++.+++++.
T Consensus 82 fAYGqTGSGKTyTm~G~-~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~l~i~e~~~ 160 (325)
T 1bg2_A 82 FAYGQTSSGKTHTMEGK-LHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKN 160 (325)
T ss_dssp EEECSTTSSHHHHHTBS-TTCTTTBCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCTTCCSBCEEECTT
T ss_pred EEECCCCCCCceEeccc-CCCcccCccHHHHHHHHHHHHHhccCCceEEEEEEEEEEecCeeeecccCCCCCceEEECCC
Confidence 79999999999999884 34456789999999999998753 34689999999999999999999889999999987
Q ss_pred CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439 77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH 156 (267)
Q Consensus 77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (267)
.| +++.|++++.|.|++|++++|+.|.++|..+++.+|..|||||+||+|+|.+....
T Consensus 161 ~~-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------------- 218 (325)
T 1bg2_A 161 RV-PYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQ--------------------- 218 (325)
T ss_dssp SC-EEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETT---------------------
T ss_pred CC-EEecCceEEeCCCHHHHHHHHHHHHhhCceeecCCCCCCCCCeEEEEEEEEEEecC---------------------
Confidence 55 88999999999999999999999999999999999999999999999999875321
Q ss_pred CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeEEE
Q 024439 157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSL 236 (267)
Q Consensus 157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~~~ 236 (267)
......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|+|||+||||+||||+||||++|+|
T Consensus 219 ~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGns~t~m 298 (325)
T 1bg2_A 219 TEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTI 298 (325)
T ss_dssp TCCEEEEEEEEEECCCSCCCCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHGGGTSSSSCEEEE
T ss_pred CCcEEEEEEEEEECCCCCcccccCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCCcccccHHHHHHHHHhCCCCcEEE
Confidence 12346799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439 237 IITVGPSARNHAETTSTIMFGQRGSIR 263 (267)
Q Consensus 237 I~~vsp~~~~~~eTl~TL~f~~r~~~i 263 (267)
|+||+|+..+++||++||+||+||++|
T Consensus 299 ia~vsP~~~~~~ETl~TL~fa~rak~I 325 (325)
T 1bg2_A 299 VICCSPSSYNESETKSTLLFGQRAKTI 325 (325)
T ss_dssp EEEECCBGGGHHHHHHHHHHHHTSCCC
T ss_pred EEEECCccccHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999986
No 3
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=9.1e-71 Score=488.63 Aligned_cols=246 Identities=38% Similarity=0.598 Sum_probs=210.0
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-----CCeEEEEEEEEecCceeecCCCCC-CCcCcccC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-----SDSVEVSYLQLYMESIQDLLAPEK-VNIPINED 74 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-----~~~v~~S~~EIy~e~v~DLL~~~~-~~~~i~~~ 74 (267)
||||||||||||||+|.. ..+++|||||++++||..+... .+.|.+||+|||||+|+|||+|.. ..+.++++
T Consensus 94 fAYGqTGSGKTyTm~G~~--~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~~l~ire~ 171 (366)
T 2zfi_A 94 FAYGQTGAGKSYTMMGKQ--EKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREH 171 (366)
T ss_dssp EEECSTTSSHHHHHTBCS--GGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTTCSCBCEEEE
T ss_pred EEeCCCCCCCceEeeCCC--ccCCCccHHHHHHHHHHHHhhcccCCeeEEEEEEEEEeeCCeEEEccccccCCCceEEEc
Confidence 799999999999997742 3467899999999999988653 358999999999999999999864 57899999
Q ss_pred CCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCC
Q 024439 75 PKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGD 154 (267)
Q Consensus 75 ~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (267)
+..| +++.|++++.|.|++|++++|..|.++|..++|.+|..|||||+||+|+|.+......
T Consensus 172 ~~~g-~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~----------------- 233 (366)
T 2zfi_A 172 PLLG-PYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAE----------------- 233 (366)
T ss_dssp TTTE-EEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTT-----------------
T ss_pred CCCC-EEEeCCEEEEECCHHHHHHHHHHHhhccccccccCCCCCCcceEEEEEEEEEecccCC-----------------
Confidence 8766 8899999999999999999999999999999999999999999999999987644211
Q ss_pred CCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC------------CCCCCCCCchhhH
Q 024439 155 NHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN------------SPHIPTRDSKLTR 222 (267)
Q Consensus 155 ~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~------------~~~ipyr~SkLT~ 222 (267)
........|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|+++ ..|||||+||||+
T Consensus 234 ~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~ 313 (366)
T 2zfi_A 234 TNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTW 313 (366)
T ss_dssp TTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHH
T ss_pred CCccceeEeEEEEEeCCCCccccccCCCccchhhhhhHhHHHHHHHHHHHHHHhcccccccccccccCCcccccccHHHH
Confidence 1112346799999999999999999999999999999999999999999999863 4699999999999
Q ss_pred hhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 223 lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
||||+||||++|+||+||+|+..+++||++||+||+||++|+|.
T Consensus 314 lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~ 357 (366)
T 2zfi_A 314 LLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNT 357 (366)
T ss_dssp HTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC-----
T ss_pred HHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999985
No 4
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=7.9e-71 Score=488.00 Aligned_cols=243 Identities=42% Similarity=0.654 Sum_probs=208.7
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK 76 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~ 76 (267)
||||||||||||||+|. .+++.++|||||++++||..+... .+.|.+||+|||||+++|||++...++.+++++.
T Consensus 89 fAYGqTGSGKTyTm~G~-~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~~ 167 (365)
T 2y65_A 89 FAYGQTSSGKTHTMEGV-IGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKN 167 (365)
T ss_dssp EEECSTTSSHHHHHTBS-TTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTCCSBCEEECSS
T ss_pred EeecCCCCCCceEEecC-CCCcccCChHHHHHHHHHHHHHhccCCceEEEEEEEEEEECCeeeecccCCcCCceEEECCC
Confidence 79999999999999884 345677899999999999988543 4689999999999999999999888999999987
Q ss_pred CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439 77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH 156 (267)
Q Consensus 77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (267)
.| +++.|++++.|.|++|++.+|..|..+|..++|.+|..|||||+||+|+|.+....
T Consensus 168 ~~-~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------------- 225 (365)
T 2y65_A 168 RV-PYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLE--------------------- 225 (365)
T ss_dssp SC-EEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETT---------------------
T ss_pred CC-EEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecC---------------------
Confidence 55 88999999999999999999999999999999999999999999999999875331
Q ss_pred CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCCCCeEE
Q 024439 157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGSARTS 235 (267)
Q Consensus 157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g~~~~~ 235 (267)
......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|+++ ..|||||+||||+||||+||||++|+
T Consensus 226 ~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~ 305 (365)
T 2y65_A 226 NQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTT 305 (365)
T ss_dssp TCCEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEE
T ss_pred CCCEeEEEEEEEECCCCCcchhcCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccCHHHHHHHhhcCCCccEE
Confidence 11346799999999999999999999999999999999999999999999987 57999999999999999999999999
Q ss_pred EEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 236 LIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
||+||+|+..+++||++||+||+|+++|+|.
T Consensus 306 mI~~isP~~~~~~ETl~TL~fA~rak~I~n~ 336 (365)
T 2y65_A 306 IVICCSPASFNESETKSTLDFGRRAKTVKNV 336 (365)
T ss_dssp EEEEECCBGGGHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEecCccCCHHHHHHHHHHHHHHhcccCc
Confidence 9999999999999999999999999999985
No 5
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-69 Score=475.00 Aligned_cols=238 Identities=41% Similarity=0.606 Sum_probs=208.1
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCC-CCcCcc--c
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEK-VNIPIN--E 73 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~-~~~~i~--~ 73 (267)
||||||||||||||+| ..+++|||||++++||..+... .+.|.+||+|||||+++|||++.. ..+.++ +
T Consensus 85 fAYGqTGSGKTyTm~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~ 160 (330)
T 2h58_A 85 FAYGQTGAGKTYTMEG----TAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCP 160 (330)
T ss_dssp EEESSTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSCSSCCCCCCEECT
T ss_pred EeECCCCCCCcEEEec----CCCCCcHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCChhhcccccccccceEEEee
Confidence 7999999999999966 4567999999999999988653 458999999999999999998753 334444 4
Q ss_pred CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439 74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG 153 (267)
Q Consensus 74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
++. |.+++.|+++++|.|++|++++|+.|.++|..++|.+|..|||||+||+|++.+....
T Consensus 161 ~~~-~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~------------------ 221 (330)
T 2h58_A 161 DGS-GQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCS------------------ 221 (330)
T ss_dssp TSS-CCEECTTCCCEEECSHHHHHHHHHHHHHHTTCTTCCSCSCGGGSEEEEEEEEEEEETT------------------
T ss_pred cCC-CCEecCCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCcCCccEEEEEEEEEEecC------------------
Confidence 554 5599999999999999999999999999999999999999999999999999775321
Q ss_pred CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439 154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233 (267)
Q Consensus 154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~ 233 (267)
.+....|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|+|||+||||+||||+||||++
T Consensus 222 ---~~~~~~skL~lVDLAGSEr~~~t~~~g~r~~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lL~dsLgGns~ 298 (330)
T 2h58_A 222 ---TGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSK 298 (330)
T ss_dssp ---TTEEEEEEEEEEECCCCCCCC------HHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTHHHHSTTCE
T ss_pred ---CCcEEEEEEEEEeCCCCCcccccCCchhhhHHHHHhhHhHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHhCCCce
Confidence 12356899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439 234 TSLIITVGPSARNHAETTSTIMFGQRGSIRI 264 (267)
Q Consensus 234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~ 264 (267)
|+||+||+|+..+++||++||+||+|+++|.
T Consensus 299 t~mI~~isP~~~~~~ETl~TL~fA~rak~i~ 329 (330)
T 2h58_A 299 TLMVVQVSPVEKNTSETLYSLKFAERVRSVE 329 (330)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHHC---
T ss_pred EEEEEEeCCccccHHHHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999985
No 6
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.7e-71 Score=489.35 Aligned_cols=241 Identities=38% Similarity=0.550 Sum_probs=196.6
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-------CCCeEEEEEEEEecCceeecCCCCCCCcCccc
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-------TSDSVEVSYLQLYMESIQDLLAPEKVNIPINE 73 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-------~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~ 73 (267)
||||||||||||||+| ..+++|||||++++||+.+.. ..+.|.+||+|||||+|+|||+|....+.+++
T Consensus 103 fAYGqTGSGKTyTM~G----~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~l~ire 178 (388)
T 3bfn_A 103 LAYGPTGAGKTHTMLG----SPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPASGDLVIRE 178 (388)
T ss_dssp EEESCTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSSCBCCCEE
T ss_pred eeecCCCCCCCeEeec----CccccchhHHHHHHHHHHHHHhhccCCCceEEEEEEEEEEECCeeeehhccCCCCceEEE
Confidence 7999999999999966 456789999999999998753 23589999999999999999999888999999
Q ss_pred CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439 74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG 153 (267)
Q Consensus 74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
++..| +++.|+++++|.|++|++.+|..|.++|..++|.+|..|||||+||+|+|.+.....
T Consensus 179 d~~~~-v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~----------------- 240 (388)
T 3bfn_A 179 DCRGN-ILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLA----------------- 240 (388)
T ss_dssp CTTSC-EECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESST-----------------
T ss_pred cCCCC-EEeccceEEEeCCHHHHHHHHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccCC-----------------
Confidence 98754 999999999999999999999999999999999999999999999999998753211
Q ss_pred CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439 154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233 (267)
Q Consensus 154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~ 233 (267)
......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|||||+||||+||||+||||++
T Consensus 241 ---~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnsk 317 (388)
T 3bfn_A 241 ---PFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAH 317 (388)
T ss_dssp ---TCCEEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCE
T ss_pred ---CCceeEEEEEEEECCCCcccccccCccchhHHHhHhhhhHHHHHHHHHHHhcCCCCCcCcccHHHHHHHHhhCCCcc
Confidence 11246799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 234 TSLIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
|+||+||+|+..+++||++||+||+|+++|+|.
T Consensus 318 T~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~ 350 (388)
T 3bfn_A 318 SILIANIAPERRFYLDTVSALNFAARSKEVINR 350 (388)
T ss_dssp EEEEEEECCSGGGHHHHHHHHHHHCSEEEEC--
T ss_pred EEEEEEECCccccHHHHHHHHHHHHHHhhCcCc
Confidence 999999999999999999999999999999884
No 7
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=9.6e-70 Score=481.23 Aligned_cols=240 Identities=39% Similarity=0.612 Sum_probs=221.6
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCC---CCcCccc
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEK---VNIPINE 73 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~---~~~~i~~ 73 (267)
||||||||||||||+| +..++|||||++++||..+... .+.|.+||+|||||+++|||+|.. ..+.+++
T Consensus 84 fAYGqTGSGKTyTM~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e 159 (369)
T 3cob_A 84 FAYGQTGSGKTFTIYG----ADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKK 159 (369)
T ss_dssp EEEECTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEE
T ss_pred EEECCCCCCCeEeecC----CCCCCchhHHHHHHHHHHHHhhccCceeEEEEEEEEEeCceeeecCCCcccCCcceEEEE
Confidence 7999999999999966 3467999999999999988654 458999999999999999999853 4788999
Q ss_pred CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439 74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG 153 (267)
Q Consensus 74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
++. |.+++.|++++.|.|++|++.+|..|.++|..++|.+|..|||||+||+|+|.+....
T Consensus 160 ~~~-~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~------------------ 220 (369)
T 3cob_A 160 DSK-GMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ------------------ 220 (369)
T ss_dssp CTT-SCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETT------------------
T ss_pred CCC-CCEEccCCEEEEeCCHHHHHHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCC------------------
Confidence 986 4599999999999999999999999999999999999999999999999999875321
Q ss_pred CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439 154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233 (267)
Q Consensus 154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~ 233 (267)
......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|||||+||||+||+|+||||++
T Consensus 221 ---~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnsk 297 (369)
T 3cob_A 221 ---TQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAK 297 (369)
T ss_dssp ---TCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSE
T ss_pred ---CCcEEEEEEEEEeCCCCCcccccCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHHhcCCCcc
Confidence 12357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 234 TSLIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
|+||+||+|+..+++||++||+||+|+++|+|.
T Consensus 298 t~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~ 330 (369)
T 3cob_A 298 TLMFVNISPAESNLDETHNSLTYASRVRSIVND 330 (369)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCC
T ss_pred EEEEEEeCCccccHHHHHHHHHHHHHHhhcccC
Confidence 999999999999999999999999999999885
No 8
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=3.9e-70 Score=485.30 Aligned_cols=248 Identities=38% Similarity=0.599 Sum_probs=204.8
Q ss_pred CcccCCccCccccccccCC-------CCCCCcChHHHHHHHHHHhccc--CCCeEEEEEEEEecCceeecCCCCC-CCcC
Q 024439 1 MAYGQTGTGKTYTLGRLGK-------DDASERGIMVRALEDIISSMSV--TSDSVEVSYLQLYMESIQDLLAPEK-VNIP 70 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~-------~~~~~~Gli~r~~~~lf~~~~~--~~~~v~~S~~EIy~e~v~DLL~~~~-~~~~ 70 (267)
||||||||||||||+|... ....++|||||++++||..+.. ..+.|.+||+|||||+++|||++.. ..+.
T Consensus 105 fAYGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~ 184 (373)
T 2wbe_C 105 FAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMMEVEYTMRISYLELYNEELCDLLSTDDTTKIR 184 (373)
T ss_dssp EEECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEETTEEEESSCTTSCSCCC
T ss_pred EeecCCCCCcceecccCccccccccccccCCCcChHHHHHHHHHHHHhcCceEEEEEEEEEEeCCeEEECCCCCCCCCce
Confidence 7999999999999988543 2345789999999999998754 4578999999999999999999754 4677
Q ss_pred cccCC-CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccc
Q 024439 71 INEDP-KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRT 149 (267)
Q Consensus 71 i~~~~-~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~ 149 (267)
+++++ ..|.+++.|+++++|.+++|++++|..|..+|..++|.+|..|||||+||+|+|.+....
T Consensus 185 i~~~~~~~g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-------------- 250 (373)
T 2wbe_C 185 IFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENG-------------- 250 (373)
T ss_dssp EEECSSSSSCEEETTCCCEEESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTC--------------
T ss_pred eEeccCCCCcEEecCceEEccCCHHHHHHHHHHHhhhhccccccCCCCCCCccEEEEEEEEEecCC--------------
Confidence 77775 457799999999999999999999999999999999999999999999999999764211
Q ss_pred cCCCCCCCCceeeeeEEEEECCCCccccccCCC-chhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhc
Q 024439 150 ELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSE-GPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF 228 (267)
Q Consensus 150 ~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~-~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l 228 (267)
.........|+|+||||||||+..+.+.. +.+++|+..||+||.+|++||.+|++++.|||||+||||+||||+|
T Consensus 251 ----~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsL 326 (373)
T 2wbe_C 251 ----IEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESL 326 (373)
T ss_dssp ----TTTCCEEEEEEEEEEECCCC--------------------CHHHHHHHHHHHHHHHCSSCCCGGGCHHHHHTHHHH
T ss_pred ----CCCCcceeEEEEEEEECCCCCccccccCccccchhHHHHHHHHHHHHHHHHHHHHcCCCcCccccchHHHHHHHHh
Confidence 11223457899999999999999988877 8999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 229 GGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 229 ~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
|||++|+||+||+|+..+++||++||+||+|+++|+|.
T Consensus 327 gGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~ 364 (373)
T 2wbe_C 327 GGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNK 364 (373)
T ss_dssp HSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEC
T ss_pred CCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999999999999999985
No 9
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=3.6e-70 Score=481.31 Aligned_cols=241 Identities=40% Similarity=0.614 Sum_probs=196.3
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK 76 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~ 76 (267)
||||||||||||||+| ..+++|||||++++||+.+... .+.|.+||+|||||+++|||++ ...+.+++++.
T Consensus 94 fAYGqTGSGKTyTm~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~-~~~l~i~e~~~ 168 (350)
T 2vvg_A 94 FAYGQTGAGKTWTMGG----NKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN-NTKLPLKEDKT 168 (350)
T ss_dssp EEECSTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT-EEEECEEEETT
T ss_pred EeecCCCCCCCEEeec----CCccCchHHHHHHHHHHHHHhhccCCcEEEEEEEEEEeCCEEEEcccC-CcCceeeEcCC
Confidence 7999999999999966 4477999999999999988632 4589999999999999999995 45788999987
Q ss_pred CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439 77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH 156 (267)
Q Consensus 77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (267)
.| +++.|+++++|.+++|++++|..|.++|..++|.+|..|||||+||+|+|.+.... ..
T Consensus 169 ~~-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-------------------~~ 228 (350)
T 2vvg_A 169 RG-IYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVI-------------------EN 228 (350)
T ss_dssp TE-EEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC----------------------
T ss_pred CC-EEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcceEEEEEEEEEeecc-------------------CC
Confidence 55 99999999999999999999999999999999999999999999999999875331 11
Q ss_pred CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeEEE
Q 024439 157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSL 236 (267)
Q Consensus 157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~~~ 236 (267)
......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|+|||+||||+||||+||||++|+|
T Consensus 229 ~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~m 308 (350)
T 2vvg_A 229 KEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLM 308 (350)
T ss_dssp -CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEE
T ss_pred CccEEEEEEEEEeCCCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCCCccccHHHHHHHHhcCCCccEEE
Confidence 12457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 237 IITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 237 I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
|+||+|...+++||++||+||+|+++|+|.
T Consensus 309 I~~isP~~~~~~ETl~TL~fA~rak~i~n~ 338 (350)
T 2vvg_A 309 CANISPASTNYDETMSTLRYADRAKQIKNK 338 (350)
T ss_dssp EEEECCBGGGHHHHHHHHHHHHHHTTCBCC
T ss_pred EEEeCCccccHHHHHHHHHHHHHHhhcccc
Confidence 999999999999999999999999999985
No 10
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-70 Score=484.27 Aligned_cols=242 Identities=35% Similarity=0.476 Sum_probs=192.2
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCC-----CCCcC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPE-----KVNIP 70 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~-----~~~~~ 70 (267)
||||||||||||||+|...++.+++|||||++++||+.+.. ..+.|.+||+|||||+|+|||++. ...+.
T Consensus 120 fAYGqTGSGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~l~ 199 (376)
T 2rep_A 120 FAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNETVRDLLATGTRKGQGGECE 199 (376)
T ss_dssp EEECSTTSSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEEETTEEEETTCCC--------CC
T ss_pred EEeCCCCCCCceEeecCCCCCcccCCcHHHHHHHHHHHHHHhhcCCeEEEEEEEEEEEECCEeeEccccccccccCCCce
Confidence 79999999999999887655677899999999999998754 246899999999999999999984 23577
Q ss_pred cccCC-CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccc
Q 024439 71 INEDP-KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRT 149 (267)
Q Consensus 71 i~~~~-~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~ 149 (267)
+++++ ..+.+++.|+++++|.+++|++.+|..|.++|..++|.+|..|||||+||+|+|.+....
T Consensus 200 ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~-------------- 265 (376)
T 2rep_A 200 IRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSS-------------- 265 (376)
T ss_dssp EEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC-----CGGGSEEEEEEEEEEEESS--------------
T ss_pred EEeccCCCCCEEECCcEEEEeCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecC--------------
Confidence 88773 345699999999999999999999999999999999999999999999999999875321
Q ss_pred cCCCCCCCCceeeeeEEEEECCCCccccccCCCc----hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhH
Q 024439 150 ELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEG----PLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225 (267)
Q Consensus 150 ~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~----~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~ 225 (267)
......|+|+||||||||+..++...+ .+++|+..||+||.+|++||.+|++++.|||||+||||+|||
T Consensus 266 -------~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLT~LLq 338 (376)
T 2rep_A 266 -------RGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQ 338 (376)
T ss_dssp -------SCCEEEEEEEEEECCCCC------------------------CHHHHHHHHHHHHTTCSCCCGGGSHHHHHTG
T ss_pred -------CCcEEEeEEEEEECCCCcccccccccCccccchhhHHhHhhHHHHHHHHHHHHHhcCCCccCCcCCHHHHHHH
Confidence 113467999999999999999988888 899999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIR 263 (267)
Q Consensus 226 ~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i 263 (267)
|+||||++|+||+||+|+..+++||++||+||+|++++
T Consensus 339 dsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 339 NSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp GGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred HhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999874
No 11
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=1.2e-70 Score=486.65 Aligned_cols=248 Identities=40% Similarity=0.593 Sum_probs=208.1
Q ss_pred CcccCCccCccccccccCCC-------CCCCcChHHHHHHHHHHhcccC--CCeEEEEEEEEecCceeecCCCCC---CC
Q 024439 1 MAYGQTGTGKTYTLGRLGKD-------DASERGIMVRALEDIISSMSVT--SDSVEVSYLQLYMESIQDLLAPEK---VN 68 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~-------~~~~~Gli~r~~~~lf~~~~~~--~~~v~~S~~EIy~e~v~DLL~~~~---~~ 68 (267)
||||||||||||||+|.... ..+.+|||||++++||+.+... .+.|.+||+|||||+++|||+|.. ..
T Consensus 93 fAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~ 172 (359)
T 1x88_A 93 FAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER 172 (359)
T ss_dssp EEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSSSSEEEEEEEEEEEEETTEEEETTCTTSCTTCC
T ss_pred EEeCCCCCCCceEEeccCCccccccccccccCCchHHHHHHHHHHHhccCceEEEEEEEEEEeCceeeehhccccccccc
Confidence 79999999999999885332 1235799999999999998764 458999999999999999999864 35
Q ss_pred cCcccCCC-CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccc
Q 024439 69 IPINEDPK-TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDT 147 (267)
Q Consensus 69 ~~i~~~~~-~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~ 147 (267)
+.+++++. .+.+++.|++++.|.|++|++++|..|..+|..++|.+|..|||||+||+|+|.+.....
T Consensus 173 l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~----------- 241 (359)
T 1x88_A 173 LQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTI----------- 241 (359)
T ss_dssp BEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECT-----------
T ss_pred ceEEeccCCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccccccCCCCCCCccEEEEEEEEEecccC-----------
Confidence 78888874 345899999999999999999999999999999999999999999999999997753311
Q ss_pred cccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHh
Q 024439 148 RTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDS 227 (267)
Q Consensus 148 ~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~ 227 (267)
+.......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|||||+||||+||||+
T Consensus 242 -------~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqds 314 (359)
T 1x88_A 242 -------DGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDS 314 (359)
T ss_dssp -------TSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGG
T ss_pred -------CCCceEEEEEEEEEcCCCCCcccccCCcccchHHHhhhhHHHHHHHHHHHHHhcCCCCCccccchHHHHHHHH
Confidence 1122456899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 228 FGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 228 l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
||||++|+||+||+|+..+++||++||+||+|+++|+|.
T Consensus 315 LgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~ 353 (359)
T 1x88_A 315 LGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNK 353 (359)
T ss_dssp SSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCC
T ss_pred hCCCCeEEEEEEECCCcccHHHHHHHHHHHHHHhhccCc
Confidence 999999999999999999999999999999999999985
No 12
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=1.6e-70 Score=486.21 Aligned_cols=246 Identities=41% Similarity=0.652 Sum_probs=211.8
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCCC-CCcCcccCCC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPEK-VNIPINEDPK 76 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~~-~~~~i~~~~~ 76 (267)
||||||||||||||+|. .++++++|||||++++||..+... .+.|.+||+|||||+|+|||++.. ..+.+++++.
T Consensus 106 fAYGqTGSGKTyTM~G~-~~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~e~~~ 184 (372)
T 3b6u_A 106 FAYGQTGTGKTYTMEGI-RGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPD 184 (372)
T ss_dssp EEEESTTSSHHHHHTBC-TTSGGGBCHHHHHHHHHHHHHHTCSSCEEEEEEEEEEEETTEEEETTSSCTTCCBCEEEETT
T ss_pred EeecCCCCCCCEeEecC-CCCcccCCcHHHHHHHHHHHhhhccCCceEEEEEEEEEeCCEEEECCCCCCCCCceEEECCC
Confidence 79999999999999874 345667899999999999988653 458999999999999999999864 5789999987
Q ss_pred CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439 77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH 156 (267)
Q Consensus 77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (267)
.| +++.|++++.|.|++|++++|..|..+|..++|.+|..|||||+||+|+|.+..... +.
T Consensus 185 ~~-v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~------------------~~ 245 (372)
T 3b6u_A 185 TG-VYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGL------------------DG 245 (372)
T ss_dssp TE-EEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----------------------
T ss_pred Cc-EecCCCEEEEecCHHHHHHHHHHHHHhcCcccccCCCCCCcceEEEEEEEEEeecCC------------------CC
Confidence 55 999999999999999999999999999999999999999999999999998753211 11
Q ss_pred CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCchhhHhhHHhcCCCCeEE
Q 024439 157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS-PHIPTRDSKLTRLLRDSFGGSARTS 235 (267)
Q Consensus 157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~-~~ipyr~SkLT~lL~~~l~g~~~~~ 235 (267)
......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++ .|||||+||||+||||+||||++|+
T Consensus 246 ~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~ 325 (372)
T 3b6u_A 246 ENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTV 325 (372)
T ss_dssp CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEE
T ss_pred CcceEEEEEEEEECCCCccccccCcchhhhhhHhhhhhhHHHHHHHHHHHhcCCCCCCcccccHHHHHHHHhcCCCccEE
Confidence 234578999999999999999999999999999999999999999999999865 5999999999999999999999999
Q ss_pred EEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 236 LIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
||+||+|+..+++||++||+||+|+++|+|.
T Consensus 326 mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~ 356 (372)
T 3b6u_A 326 MVANVGPASYNVEETLTTLRYANRAKNIKNK 356 (372)
T ss_dssp EEEEECCBGGGHHHHHHHHHHHHHHTTCBCC
T ss_pred EEEEeCCcccCHHHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999999999999985
No 13
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=2.2e-69 Score=476.66 Aligned_cols=238 Identities=33% Similarity=0.461 Sum_probs=203.3
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCC--------
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKV-------- 67 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~-------- 67 (267)
||||||||||||||+|. ++|||||++++||..+.. ..+.|.+||+|||||+|+|||++...
T Consensus 89 fAYGqTGSGKTyTM~G~------~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~ 162 (347)
T 1f9v_A 89 FAYGQTGSGKTFTMLNP------GDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKEDTSIG 162 (347)
T ss_dssp EEECCTTSSHHHHHHST------TTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC------------
T ss_pred EEECCCCCCCcEeccCC------CCCchHHHHHHHHHHHHhhhhcCCceEEEEEEEEEECCeeeeccCCccccccccccC
Confidence 79999999999999763 469999999999998753 35689999999999999999998643
Q ss_pred -CcCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccccc
Q 024439 68 -NIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKD 146 (267)
Q Consensus 68 -~~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~ 146 (267)
.+.+++++..+.+++.|++++.|.+++|++.+|..|.++|..++|.+|..|||||+||+|+|.+....
T Consensus 163 ~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~----------- 231 (347)
T 1f9v_A 163 LKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAK----------- 231 (347)
T ss_dssp -CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC------------
T ss_pred CceeEEEecCCCceEecCCEEEEcCCHHHHHHHHHHHHhccceeeccCCCCCCCceEEEEEEEEEecCC-----------
Confidence 46777776667799999999999999999999999999999999999999999999999999875321
Q ss_pred ccccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCCCchhhHh
Q 024439 147 TRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS---PHIPTRDSKLTRL 223 (267)
Q Consensus 147 ~~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~---~~ipyr~SkLT~l 223 (267)
.+....|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++ .|||||+||||+|
T Consensus 232 ----------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~l 301 (347)
T 1f9v_A 232 ----------TGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYL 301 (347)
T ss_dssp -----------CCEEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHH
T ss_pred ----------CCceeeeEEEEEECCCCccccccccchhhhHHHHHHhHHHHHHHHHHHHHhcccCCCCcCccccCHHHHH
Confidence 123467999999999999999999999999999999999999999999999876 7999999999999
Q ss_pred hHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhc
Q 024439 224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRIS 265 (267)
Q Consensus 224 L~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~ 265 (267)
|||+||||++|+||+||+|+..+++||++||+||+|+++|..
T Consensus 302 LqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~r~~~i~~ 343 (347)
T 1f9v_A 302 LQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRL 343 (347)
T ss_dssp HHHHHSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCTTT
T ss_pred HHHHhCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999875
No 14
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=5.4e-69 Score=475.31 Aligned_cols=240 Identities=37% Similarity=0.590 Sum_probs=192.2
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCC--CCCcCccc
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPE--KVNIPINE 73 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~--~~~~~i~~ 73 (267)
||||||||||||||+| ..+++|||||++++||..+.. ..+.|.+||+|||||+|+|||+|. ...+.+++
T Consensus 97 fAYGqTGSGKTyTm~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e 172 (354)
T 3gbj_A 97 FAYGQTGSGKSYTMMG----TADQPGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVRE 172 (354)
T ss_dssp EEEECTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHHHCBTTEEEEEEEEEEEEETTEEEETTC------CBCBC-
T ss_pred EeeCCCCCCCceEEec----CCCCCchhhHHHHHHHHHHHhhcccccceeeeceeEEEecCeeeEccCCCCCCcceEEEE
Confidence 7999999999999966 456789999999999987743 235899999999999999999985 35789999
Q ss_pred CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439 74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG 153 (267)
Q Consensus 74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
++..| +++.|++++.|.+++|++.+|..|.++|..++|.+|..|||||+||+|+|.+.....
T Consensus 173 ~~~~g-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----------------- 234 (354)
T 3gbj_A 173 HSVLG-PYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDV----------------- 234 (354)
T ss_dssp ------CCBTTCCCEEECSHHHHHHHHHHHHHCC----------CTTSEEEEEEEEEEEEECT-----------------
T ss_pred cCCCC-EEEEeeEEEecCCHHHHHHHHHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEeccc-----------------
Confidence 98766 889999999999999999999999999999999999999999999999998753321
Q ss_pred CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhc------CCCCCCCCCchhhHhhHHh
Q 024439 154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE------NSPHIPTRDSKLTRLLRDS 227 (267)
Q Consensus 154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~------~~~~ipyr~SkLT~lL~~~ 227 (267)
.........|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++ +..|||||+||||+||||+
T Consensus 235 ~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~~~~hvPyRdSkLT~lLqds 314 (354)
T 3gbj_A 235 KSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDS 314 (354)
T ss_dssp TSCEEEEEEEEEEEEECCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHHHHC------CCCCCGGGSHHHHHTHHH
T ss_pred CCCCCCeeEEEEEEEECCCCCchhhcCCccccchhHHHhhHHHHHHHHHHHHHHhhhcccCCCCcccccccHHHHHHHHH
Confidence 1111234679999999999999999999999999999999999999999999986 3469999999999999999
Q ss_pred cCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhh
Q 024439 228 FGGSARTSLIITVGPSARNHAETTSTIMFGQRGSI 262 (267)
Q Consensus 228 l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~ 262 (267)
||||++|+||+||+|+..+++||++||+||+||+.
T Consensus 315 LgGnskt~mIa~vsP~~~~~~ETlsTLr~a~~~~~ 349 (354)
T 3gbj_A 315 LGGNSKTAMVATVSPAADNYDETLSTLRYADRAKH 349 (354)
T ss_dssp HSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC-
T ss_pred hCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999975
No 15
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=1.8e-69 Score=478.49 Aligned_cols=239 Identities=40% Similarity=0.582 Sum_probs=190.9
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK 76 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~ 76 (267)
||||||||||||||+| ..+++|||||++++||..+... .+.|.+||+|||||+++|||++. .++.+++++.
T Consensus 110 fAYGqTGSGKTyTm~G----~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~-~~l~ire~~~ 184 (355)
T 3lre_A 110 LAYGATGAGKTHTMLG----SADEPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVNS-GPLAVREDTQ 184 (355)
T ss_dssp EEECCTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEETTEEEESSSCC-CCBEEEECTT
T ss_pred EEeCCCCCCceeeecc----CCCCCCeeehhhhHHHHhhhhhccCceEEEEEEEEEEECCEEEECcCCC-CCceeEEcCC
Confidence 7999999999999965 4567899999999999987653 34899999999999999999974 5789999987
Q ss_pred CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439 77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH 156 (267)
Q Consensus 77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (267)
.| +++.|++++.|.|++|++.+|..|.++|..++|.+|..|||||+||+|++.+..... ..
T Consensus 185 ~~-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~------------------~~ 245 (355)
T 3lre_A 185 KG-VVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTA------------------SI 245 (355)
T ss_dssp SC-EEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEETTS------------------CT
T ss_pred CC-EEeeeeeEEecCCHHHHHHHHHHHHhcCCcccccCcCCCCCCcEEEEEEEEEecCCC------------------CC
Confidence 66 899999999999999999999999999999999999999999999999998763321 11
Q ss_pred CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCCCchhhHhhHHhcCCCCe
Q 024439 157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS---PHIPTRDSKLTRLLRDSFGGSAR 233 (267)
Q Consensus 157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~---~~ipyr~SkLT~lL~~~l~g~~~ 233 (267)
......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++ .|+|||+||||+||||+|||||+
T Consensus 246 ~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lL~dsLgGnsk 325 (355)
T 3lre_A 246 NQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQ 325 (355)
T ss_dssp TCCCCCEEEEEEECCCCCC-----------------CHHHHHHHHHHHHHC--------CCGGGSHHHHHTTTTSSTTSE
T ss_pred CCCEEEEEEEEEECCCCCcCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCCcccCHHHHHHHHhcCCCce
Confidence 123467999999999999999999999999999999999999999999998753 49999999999999999999999
Q ss_pred EEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439 234 TSLIITVGPSARNHAETTSTIMFGQRGSIR 263 (267)
Q Consensus 234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i 263 (267)
|+||+||+|+..+++||++||+||+||++|
T Consensus 326 t~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 326 TIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred EEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999986
No 16
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.9e-69 Score=475.75 Aligned_cols=243 Identities=36% Similarity=0.498 Sum_probs=211.2
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCCC--CCcCcccCC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPEK--VNIPINEDP 75 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~~--~~~~i~~~~ 75 (267)
||||||||||||||+| ..+++|||||++++||+.+... .+.|.+||+|||||+|+|||++.. .++.+++++
T Consensus 82 fAYGqTGSGKTyTM~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~ed~ 157 (349)
T 1t5c_A 82 FAYGQTASGKTYTMMG----SEDHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDV 157 (349)
T ss_dssp EEEESTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHGGGCTTEEEEEEEEEEEEETTEEEESSSSSCTTCCEEEEETT
T ss_pred eeecCCCCCCCeEEec----CCCCCchHHHHHHHHHHHHHhCcCCcEEEEEEEEEEeCCEEEEccCCCCCCCCceEEECC
Confidence 7999999999999966 4567999999999999998764 458999999999999999998754 578899998
Q ss_pred CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCC
Q 024439 76 KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDN 155 (267)
Q Consensus 76 ~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (267)
..| +++.|++++.|.+++|++.+|..|.++|..++|.+|..|||||+||+|++.+...... ..
T Consensus 158 ~~~-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~----------------~~ 220 (349)
T 1t5c_A 158 NRN-VYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEP----------------SN 220 (349)
T ss_dssp TTE-EEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC--------------------
T ss_pred CCC-EEecCCEEEEeCCHHHHHHHHHHhhcccccccccCCCCCCCceEEEEEEEEEeccCCC----------------cC
Confidence 754 9999999999999999999999999999999999999999999999999987633211 01
Q ss_pred CCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCchhhHhhHHhcCCCCe
Q 024439 156 HVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS--PHIPTRDSKLTRLLRDSFGGSAR 233 (267)
Q Consensus 156 ~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~--~~ipyr~SkLT~lL~~~l~g~~~ 233 (267)
.......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++ .|||||+||||+||||+||||++
T Consensus 221 ~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnsk 300 (349)
T 1t5c_A 221 CEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAK 300 (349)
T ss_dssp ---CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSE
T ss_pred cCccEEEEEEEEEECCCCccccccCCccccchhhhHHhHHHHHHHHHHHHHhccCCCCCCcccccHHHHHHHHhcCCCce
Confidence 1124578999999999999999999999999999999999999999999999875 59999999999999999999999
Q ss_pred EEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 234 TSLIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
|+||+||+|. +++||++||+||+||++|+|.
T Consensus 301 t~mI~~isP~--~~~ETlsTL~fA~rak~I~n~ 331 (349)
T 1t5c_A 301 TRIICTITPV--SFDETLTALQFASTAKYMKNT 331 (349)
T ss_dssp EEEEEEECTT--CSHHHHHHHHHHHHHTTCCCC
T ss_pred EEEEEEeCCC--CHHHHHHHHHHHHHHhhcccC
Confidence 9999999997 599999999999999999985
No 17
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=8e-69 Score=474.36 Aligned_cols=239 Identities=31% Similarity=0.452 Sum_probs=206.4
Q ss_pred CcccCCccCccccccccC-CCCCCCcChHHHHHHHHHHhccc----CCCeEEEEEEEEecCceeecCCCCCCCcCcccCC
Q 024439 1 MAYGQTGTGKTYTLGRLG-KDDASERGIMVRALEDIISSMSV----TSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDP 75 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~-~~~~~~~Gli~r~~~~lf~~~~~----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~ 75 (267)
||||||||||||||+|.. .+..+++|||||++++||..+.. ..+.|.+||+|||||+|+|||++.. .+.+++++
T Consensus 89 fAYGqTGSGKTyTM~G~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~-~~~~~e~~ 167 (360)
T 1ry6_A 89 FAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKRK-MVAALENG 167 (360)
T ss_dssp EEECCTTSSHHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC-----------
T ss_pred EeeCCCCCCCCEEEecCCCCCCccCCCcHHHHHHHHHHHHHhhccCCceEEEEEEEEeeCCeeEEcccCCc-cceeeEcC
Confidence 799999999999998853 23457899999999999998753 3568999999999999999999753 45677777
Q ss_pred CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCC
Q 024439 76 KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDN 155 (267)
Q Consensus 76 ~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (267)
..| +++.|+++++|.+++|++++|..|.++|..++|.+|..|||||+||+|++.+...
T Consensus 168 ~~~-~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~--------------------- 225 (360)
T 1ry6_A 168 KKE-VVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDINK--------------------- 225 (360)
T ss_dssp -CC-BCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETTT---------------------
T ss_pred CCC-EEEcCcEEEEeCCHHHHHHHHHHHhhhhhcccccccCCCccceEEEEEEEEeccC---------------------
Confidence 644 8999999999999999999999999999999999999999999999999976311
Q ss_pred CCCceeeeeEEEEECCCCccccccCCCc-hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeE
Q 024439 156 HVPLVRKSKLLIVDLAGSERIDKSGSEG-PLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART 234 (267)
Q Consensus 156 ~~~~~~~s~l~fvDLagse~~~~~~~~~-~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~ 234 (267)
....|+|+||||||||+..++...+ .+.+|+..||+||.+|++||.+|++++.|+|||+||||+||||+||||++|
T Consensus 226 ---~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt 302 (360)
T 1ry6_A 226 ---NTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKS 302 (360)
T ss_dssp ---TEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGGGCHHHHHTGGGGSSSCEE
T ss_pred ---CcceeEEEEEECCCCccccccccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCHHHHHHHHHhCCCCeE
Confidence 2357999999999999988887665 567899999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCChHHHHHHhHHHHHhhhhhc
Q 024439 235 SLIITVGPSARNHAETTSTIMFGQRGSIRIS 265 (267)
Q Consensus 235 ~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~ 265 (267)
+||+||+|+..+++||++||+||+|+++|+|
T Consensus 303 ~mIa~isP~~~~~~ETlsTLrfA~rak~i~n 333 (360)
T 1ry6_A 303 IMIANISPTISCCEQTLNTLRYSSRVKNKGN 333 (360)
T ss_dssp EEEEEECCBGGGHHHHHHHHHHHHHHCC---
T ss_pred EEEEEeCCCcccHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999988
No 18
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=8.1e-69 Score=473.71 Aligned_cols=237 Identities=34% Similarity=0.452 Sum_probs=195.9
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCC---------
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEK--------- 66 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~--------- 66 (267)
||||||||||||||+|. ++|||||++++||+.+.. ..+.|.+||+|||||+|+|||++..
T Consensus 90 fAYGqTGSGKTyTm~g~------~~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~ 163 (349)
T 3t0q_A 90 FAYGQTGSGKTYTMLNA------GDGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKSHDNIDEIL 163 (349)
T ss_dssp EEECSTTSSHHHHHHST------TTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC------------
T ss_pred EEeCCCCCCCceEeCCC------CCchhhHHHHHHHHHHHHhhhcCceeEEEEEEEEEEcchhhcccccccccccccccc
Confidence 79999999999999763 359999999999997653 2468999999999999999998743
Q ss_pred --CCcCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccc
Q 024439 67 --VNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEE 144 (267)
Q Consensus 67 --~~~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~ 144 (267)
..+.+++++..+.+++.|+++++|.+++|+..+|..|.++|..+++.+|..|||||+||+|+|.+....
T Consensus 164 ~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------- 234 (349)
T 3t0q_A 164 DSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLH--------- 234 (349)
T ss_dssp ---CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEETT---------
T ss_pred ccccceeEEecCCCCEEEeCCEEEEeCCHHHHHHHHHHHHHhCcccccccccccCCcceEEEEEEEEEecC---------
Confidence 456777777666699999999999999999999999999999999999999999999999999876332
Q ss_pred ccccccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC---CCCCCCchhh
Q 024439 145 KDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP---HIPTRDSKLT 221 (267)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~---~ipyr~SkLT 221 (267)
.+....|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++. |||||+||||
T Consensus 235 ------------~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT 302 (349)
T 3t0q_A 235 ------------TGETSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLT 302 (349)
T ss_dssp ------------TCCEEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHH
T ss_pred ------------CCCeeEEEEEEEeCCCCCccccccCccccchhHHhhhHhHHHHHHHHHHHhcccCCCCcCCCcCCHHH
Confidence 1134679999999999999999999999999999999999999999999987654 9999999999
Q ss_pred HhhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439 222 RLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRI 264 (267)
Q Consensus 222 ~lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~ 264 (267)
+||||+||||++|+||+||+|+..+++||++||+||+|++.|.
T Consensus 303 ~lLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~ik 345 (349)
T 3t0q_A 303 YLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASKVNSTK 345 (349)
T ss_dssp HHHGGGSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHC--
T ss_pred HHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999999999999999999999999875
No 19
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=6e-69 Score=486.47 Aligned_cols=242 Identities=36% Similarity=0.608 Sum_probs=200.3
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-------CCeEEEEEEEEecCceeecCCCC-----CCC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-------SDSVEVSYLQLYMESIQDLLAPE-----KVN 68 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-------~~~v~~S~~EIy~e~v~DLL~~~-----~~~ 68 (267)
||||||||||||||+| ..+++|||||++++||..+... .+.|.+||+|||||+|+|||+|. ...
T Consensus 141 fAYGQTGSGKTyTM~G----~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~~~~ 216 (443)
T 2owm_A 141 FAYGQTGSGKSYTMMG----TPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYY 216 (443)
T ss_dssp EEESSTTSSHHHHHTC----CTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCSSCCCCC
T ss_pred EEeCCCCCCCCEEeec----CCCCCchHHHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCEeeEccCccccCCcccc
Confidence 7999999999999965 4567899999999999987542 45899999999999999999973 235
Q ss_pred cCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccccccc
Q 024439 69 IPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTR 148 (267)
Q Consensus 69 ~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~ 148 (267)
+.+++++..| +++.|++++.|.+++|++++|..|..+|..++|.+|..|||||+||+|+|.+......
T Consensus 217 l~ire~~~~g-~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~----------- 284 (443)
T 2owm_A 217 LKVRESPTEG-PYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLE----------- 284 (443)
T ss_dssp CEEEEETTTE-EEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC---------------
T ss_pred cceeECCCCC-EeccCCEEEEcCCHHHHHHHHHHHHhhCCcccCcCCCccCCCeEEEEEEEEEeecccC-----------
Confidence 8899998755 8999999999999999999999999999999999999999999999999987533210
Q ss_pred ccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC------------------
Q 024439 149 TELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS------------------ 210 (267)
Q Consensus 149 ~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~------------------ 210 (267)
........|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++
T Consensus 285 ------~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~ 358 (443)
T 2owm_A 285 ------TDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTP 358 (443)
T ss_dssp ---------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC--------------------
T ss_pred ------CCCcceEEEEEEEEECCCCccccccCCccccccchhhhcHHHHHHHHHHHHHhccccccccccccccccccccc
Confidence 01123467999999999999999999999999999999999999999999998743
Q ss_pred ----CCCCCCCchhhHhhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 211 ----PHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 211 ----~~ipyr~SkLT~lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
.||||||||||+||||+||||++|+||+||+|+ +++||++||+||+||++|+|.
T Consensus 359 ~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~ 416 (443)
T 2owm_A 359 GPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTR 416 (443)
T ss_dssp -----CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEEC
T ss_pred ccCCCcccCcccHhHHHHHHhhCCCCcEEEEEEeccc--cHHHHHHHHHHHHHHhhcccc
Confidence 389999999999999999999999999999997 599999999999999999875
No 20
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=4.1e-69 Score=475.15 Aligned_cols=247 Identities=41% Similarity=0.605 Sum_probs=194.4
Q ss_pred CcccCCccCccccccccCCC--CCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCC--CCCcCccc
Q 024439 1 MAYGQTGTGKTYTLGRLGKD--DASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPE--KVNIPINE 73 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~--~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~--~~~~~i~~ 73 (267)
||||||||||||||+|.... ..+++|||||++++||+.+... .+.|.+||+|||||+++|||++. ...+.+++
T Consensus 88 fAYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e 167 (344)
T 4a14_A 88 FAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVSYLEVYKEEFRDLLEVGTASRDIQLRE 167 (344)
T ss_dssp EEESSTTSSHHHHHCC--------CCCCHHHHHHHHHHHHHHHCTTSEEEEEEEEEEEETTEEEETTSSCCCGGGCEEEE
T ss_pred EEecccCCCceEeecccchhhhhhcccCCchHHHHHHHHhcccccceeeEEEEehhhhhHHHHHHHHHhccccccceeee
Confidence 79999999999999775322 2467999999999999988654 45899999999999999999864 34688999
Q ss_pred CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439 74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG 153 (267)
Q Consensus 74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
++. |.+++.|++++.|.+++|++++|..|.++|..+++.+|..|||||+||+|+|.+........ .
T Consensus 168 ~~~-~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~-------------~ 233 (344)
T 4a14_A 168 DER-GNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRL-------------P 233 (344)
T ss_dssp CTT-SCEEEESCCCEECCSHHHHHHHHHHHHHHHHC------CCGGGSEEEEEEEEEEEC--------------------
T ss_pred ccC-CCEEEEeeeeccccCHHHHHHHHHhcchhcccCcchhhhcccccceEEEEEeeeCCCCcccC-------------C
Confidence 987 45999999999999999999999999999999999999999999999999998864321100 0
Q ss_pred CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCCchhhHhhHHhcCC
Q 024439 154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN---SPHIPTRDSKLTRLLRDSFGG 230 (267)
Q Consensus 154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~---~~~ipyr~SkLT~lL~~~l~g 230 (267)
.........|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|+++ ..|||||+||||+||||+|||
T Consensus 234 ~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hvPyRdSkLT~lLqdsLgG 313 (344)
T 4a14_A 234 RPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGG 313 (344)
T ss_dssp -----CEEEEEEEEEECCCCCCC--------------CCCSHHHHHHHHHHHHTCTTTTTSCCCGGGCHHHHHTTTSSST
T ss_pred CccccceeeeeeeEEecccchhhcccCCchhhhhhheeechhHHhhhhHHHhcCCccccCCCCCcchhhHHHHhHhhcCC
Confidence 11223467899999999999999999999999999999999999999999999874 359999999999999999999
Q ss_pred CCeEEEEEEeCCCCCChHHHHHHhHHHHHhh
Q 024439 231 SARTSLIITVGPSARNHAETTSTIMFGQRGS 261 (267)
Q Consensus 231 ~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~ 261 (267)
|++|+||+||+|...+++||++||+||+||+
T Consensus 314 nskt~mI~~vsP~~~~~~ETl~TL~fA~rAk 344 (344)
T 4a14_A 314 NAKTVMIACVSPSSSDFDETLNTLNYASRAQ 344 (344)
T ss_dssp TSEEEEEEEECCBGGGHHHHHHHHHHHHHTC
T ss_pred CcceEEEEEeCCCccchhHHhhhhhhhhhcC
Confidence 9999999999999999999999999999986
No 21
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=2.2e-69 Score=477.59 Aligned_cols=241 Identities=40% Similarity=0.583 Sum_probs=197.2
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCC------CCCcCc
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPE------KVNIPI 71 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~------~~~~~i 71 (267)
||||||||||||||+|.. ++..++|||||++++||+.+++. .+.|.+||+|||||+++|||++. ..++.+
T Consensus 108 fAYGqTGSGKTyTM~G~~-~~~~~~Giipra~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~l~i 186 (358)
T 2nr8_A 108 MCYGQTGAGKTYTMMGAT-ENYKHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTI 186 (358)
T ss_dssp EEEESTTSSHHHHHTBCS-SCGGGBCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEE
T ss_pred EEECCCCCCCceEecccc-cccccCCcHHHHHHHHHHHHhhcCCceEEEEEEEEEEeCCeeeECcCCccccCccCCceEE
Confidence 799999999999998743 33456899999999999988654 45899999999999999999873 346788
Q ss_pred ccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccC
Q 024439 72 NEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTEL 151 (267)
Q Consensus 72 ~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~ 151 (267)
++++ .| ++++|++++.|.+++|++.+|..|.++|..++|.+|..|||||+||+|+|.+......
T Consensus 187 ~e~~-~g-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~-------------- 250 (358)
T 2nr8_A 187 VENP-QG-VFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLS-------------- 250 (358)
T ss_dssp EEET-TE-EEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------------------
T ss_pred EECC-Cc-eEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcCeEEEEEEEEEEeccCC--------------
Confidence 8888 45 8899999999999999999999999999999999999999999999999987532111
Q ss_pred CCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCchhhHhhHHhcCC
Q 024439 152 PGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS-PHIPTRDSKLTRLLRDSFGG 230 (267)
Q Consensus 152 ~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~-~~ipyr~SkLT~lL~~~l~g 230 (267)
......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++ .|||||+||||+||||+|||
T Consensus 251 -----~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hiPyRdSkLT~LLqdsLgG 325 (358)
T 2nr8_A 251 -----EEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGG 325 (358)
T ss_dssp -------CCEEEEEEEEECCCCC----------------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSS
T ss_pred -----CCCEEEEEEEEEECCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCccCHHHHHHHHhcCC
Confidence 123467999999999999999999999999999999999999999999998754 69999999999999999999
Q ss_pred CCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439 231 SARTSLIITVGPSARNHAETTSTIMFGQRGSIR 263 (267)
Q Consensus 231 ~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i 263 (267)
||+|+||+||+|...+++||++||+||+|++.|
T Consensus 326 nskt~mIa~isP~~~~~~ETlsTLrfA~Rak~I 358 (358)
T 2nr8_A 326 NCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 358 (358)
T ss_dssp SSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred CCeEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999986
No 22
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-69 Score=477.54 Aligned_cols=241 Identities=40% Similarity=0.586 Sum_probs=195.1
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCCC------CCcCc
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPEK------VNIPI 71 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~~------~~~~i 71 (267)
||||||||||||||+|.. .+.+++|||||++++||+.+... .+.|.+||+|||||+++|||++.. ..+.+
T Consensus 109 fAYGQTGSGKTyTM~G~~-~~~~~~Giipra~~~lF~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~ 187 (359)
T 3nwn_A 109 MCYGQTGAGKTYTMMGAT-ENYKHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTI 187 (359)
T ss_dssp EEEESTTSSHHHHHTBCS-SCGGGBCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEE
T ss_pred EEeCCCCCCccEEeCCcc-CCccchhhHHHHHHHHHHHhhcCCCCcEEEEEEEEEEeccccccccccccccccccccceE
Confidence 799999999999998853 34567899999999999987554 468999999999999999998632 23555
Q ss_pred ccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccC
Q 024439 72 NEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTEL 151 (267)
Q Consensus 72 ~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~ 151 (267)
++++. | +++.|++++.|.+++|++++|..|..+|..++|.+|..|||||+||+|+|.+......
T Consensus 188 ~~~~~-g-~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~-------------- 251 (359)
T 3nwn_A 188 VENPQ-G-VFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLS-------------- 251 (359)
T ss_dssp EEETT-E-EEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------------------
T ss_pred EecCC-c-eEEeccEEEEecCHHHHHHHHHhhhhhcccccccCccccCcceEEEEEEEEeeccccc--------------
Confidence 66653 5 8899999999999999999999999999999999999999999999999977533211
Q ss_pred CCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCC
Q 024439 152 PGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGG 230 (267)
Q Consensus 152 ~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g 230 (267)
......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|+++ ..|||||+||||+||||+|||
T Consensus 252 -----~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~~Lg~vI~aL~~~~~~hVPYRdSkLT~lLqdsLgG 326 (359)
T 3nwn_A 252 -----EEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGG 326 (359)
T ss_dssp -------CCEEEEEEEEECCCCC----------------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSS
T ss_pred -----CcccccccceeeeccccccccccCCchhHHHhhhhhcccHHHHHHHHHHHHhcCCCcCCcccCHHHHHHHHhcCC
Confidence 12346799999999999999999999999999999999999999999999875 469999999999999999999
Q ss_pred CCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439 231 SARTSLIITVGPSARNHAETTSTIMFGQRGSIR 263 (267)
Q Consensus 231 ~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i 263 (267)
||+|+||+||+|...+++||++||+||+||++|
T Consensus 327 nskt~mI~~isP~~~~~~ETlsTL~fA~rak~I 359 (359)
T 3nwn_A 327 NCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 359 (359)
T ss_dssp SSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred CccEEEEEEeCCchhhHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999986
No 23
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=2.1e-68 Score=473.97 Aligned_cols=238 Identities=33% Similarity=0.462 Sum_probs=189.6
Q ss_pred CcccCCccCccccccccC--CCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCCCcCccc
Q 024439 1 MAYGQTGTGKTYTLGRLG--KDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKVNIPINE 73 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~--~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~ 73 (267)
||||||||||||||+|.. .....++|||||++++||..+.. ..+.|.+||+|||||+|+|||++. ..+.+++
T Consensus 139 fAYGQTGSGKTyTM~G~~~~~~~~~~~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~~-~~l~i~e 217 (387)
T 2heh_A 139 FAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKK-AKLRVLE 217 (387)
T ss_dssp EEESCTTSSHHHHHC-----------CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTEEEETTTTT-EECEEEE
T ss_pred EEecCCCCCCCeEeccCCCCCCcccCCceehhhHHHHHHHhhcccccCceEEEEEEEEEecCCeEEECCCCC-ccceEEE
Confidence 799999999999998842 22356789999999999998754 467999999999999999999974 5688999
Q ss_pred CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439 74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG 153 (267)
Q Consensus 74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
++..| +++.|+++++|.|++|++++|..|.++|..++|.+|..|||||+||+|+|.+..
T Consensus 218 d~~~~-v~v~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~-------------------- 276 (387)
T 2heh_A 218 DGKQQ-VQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKG-------------------- 276 (387)
T ss_dssp CTTCC-EEEETCCCEEESSHHHHHHHHHHHHHHC---------CGGGSEEEEEEEEESSS--------------------
T ss_pred cCCCC-EEecCCEEEEeCCHHHHHHHHHHHHhhCCcccCcCcCCcccceEEEEEEEEECC--------------------
Confidence 98755 999999999999999999999999999999999999999999999999997631
Q ss_pred CCCCCceeeeeEEEEECCCCccccccC-CCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHh-cCCC
Q 024439 154 DNHVPLVRKSKLLIVDLAGSERIDKSG-SEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDS-FGGS 231 (267)
Q Consensus 154 ~~~~~~~~~s~l~fvDLagse~~~~~~-~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~-l~g~ 231 (267)
...|+|+||||||||+..+.. ..+.+.+|+..||+||.+|++||.+|++++.|||||+||||+||||+ ||||
T Consensus 277 ------~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPYRdSKLTrlLqdsllGgn 350 (387)
T 2heh_A 277 ------RMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGEN 350 (387)
T ss_dssp ------SEEEEEEEEECCCCC---------------CHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGGSSTT
T ss_pred ------eeeeEEEEEECCCCccccccccccccchhhHHHHhHHHHHHHHHHHHHhcCCCCCCccccHHHHHHhhhccCCC
Confidence 257999999999999987665 45667789999999999999999999999999999999999999999 5999
Q ss_pred CeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 232 ARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 232 ~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
++|+||+||+|+..+++||++||+||+|+++|+++
T Consensus 351 skT~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~ 385 (387)
T 2heh_A 351 SRTCMIATISPGISSCEYTLNTLRYADRVKELSPH 385 (387)
T ss_dssp EEEEEEEEECCBGGGHHHHHHHHHHHHHHCC----
T ss_pred CeEEEEEEeCCccchHHHHHHHHHHHHHhccCcCC
Confidence 99999999999999999999999999999999864
No 24
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=1.2e-67 Score=471.67 Aligned_cols=236 Identities=32% Similarity=0.464 Sum_probs=192.3
Q ss_pred CcccCCccCccccccccC--CCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCCCcCccc
Q 024439 1 MAYGQTGTGKTYTLGRLG--KDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKVNIPINE 73 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~--~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~ 73 (267)
||||||||||||||+|.. .....++|||||++++||..+.. ..+.|.+||+|||||+|+|||++. ..+.+++
T Consensus 159 fAYGQTGSGKTyTM~G~~~~~~~~~~~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~-~~l~i~e 237 (410)
T 1v8k_A 159 FAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKK-AKLRVLE 237 (410)
T ss_dssp EEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTTT-EEEEEEE
T ss_pred EeecCCCCCCCeEeecCCCCCCccccCcchhhhHHHHHHHHhhhcccCccEEEEEEEEEeeCCEEEECCCCC-CCceEEE
Confidence 799999999999998842 23356789999999999998753 457999999999999999999974 5688999
Q ss_pred CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439 74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG 153 (267)
Q Consensus 74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
++..| +++.|++++.|.|++|++.+|..|..+|..++|.+|..|||||+||+|+|.+..
T Consensus 238 d~~~~-v~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~-------------------- 296 (410)
T 1v8k_A 238 DSRQQ-VQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG-------------------- 296 (410)
T ss_dssp CSSCC-EEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESSS--------------------
T ss_pred CCCCC-eEecCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCCCCceEEEEEEEEeCC--------------------
Confidence 98755 999999999999999999999999999999999999999999999999997631
Q ss_pred CCCCCceeeeeEEEEECCCCccccccC-CCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHh-cCCC
Q 024439 154 DNHVPLVRKSKLLIVDLAGSERIDKSG-SEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDS-FGGS 231 (267)
Q Consensus 154 ~~~~~~~~~s~l~fvDLagse~~~~~~-~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~-l~g~ 231 (267)
...|+|+||||||||+..+.. ..+.+.+|+..||+||.+|++||.+|++++.|||||+||||+||||+ ||||
T Consensus 297 ------~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hIPYRdSKLTrLLqdsllGgn 370 (410)
T 1v8k_A 297 ------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGEN 370 (410)
T ss_dssp ------SEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHHTTHHHHSSS
T ss_pred ------cceeEEEEEECCCccccccccccccchhHHHHHHhHHHHHHHHHHHHHhcCCCCCCcccchhHHHHhhcccCCC
Confidence 157999999999999987665 45567789999999999999999999999999999999999999999 5999
Q ss_pred CeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439 232 ARTSLIITVGPSARNHAETTSTIMFGQRGSIRI 264 (267)
Q Consensus 232 ~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~ 264 (267)
++|+||+||+|+..+++||++||+||+|+++|-
T Consensus 371 skT~mIa~iSP~~~~~~ETlsTLrfA~rak~i~ 403 (410)
T 1v8k_A 371 SRTCMIAMISPGISSCEYTLNTLRYADRVKELS 403 (410)
T ss_dssp EEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEEEeCCccccHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999999999999874
No 25
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-67 Score=473.82 Aligned_cols=238 Identities=34% Similarity=0.482 Sum_probs=207.8
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCC---------
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEK--------- 66 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~--------- 66 (267)
||||||||||||||+|. ++|||||++++||..+.. ..+.|.+||+|||||+|+|||++..
T Consensus 145 fAYGqTGSGKTyTM~g~------~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~ 218 (403)
T 4etp_A 145 FAYGQTGSGKTFTMLNP------GDGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKEDTSIG 218 (403)
T ss_dssp EEESCTTSSHHHHHHCT------TTSHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC--------CCS
T ss_pred EEECCCCCCCceEeCCC------CCccchhHHHHHHHHHHhhhccCceEEEEEEEEEEecceeeEccCCccccccccccC
Confidence 79999999999999763 359999999999997753 2468999999999999999998753
Q ss_pred CCcCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccccc
Q 024439 67 VNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKD 146 (267)
Q Consensus 67 ~~~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~ 146 (267)
..+.+++++..+.+++.|++++.|.+++|+..+|..|..+|..++|.+|..|||||+||+|+|.+....
T Consensus 219 ~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~----------- 287 (403)
T 4etp_A 219 LKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAK----------- 287 (403)
T ss_dssp CCCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHHHHHTSEEEEEEEEEEEETT-----------
T ss_pred cceeeEEeCCCCCEEecCcEEEEeCCHHHHHHHHHHHHHhcccccccCCcccCCcccEEEEEEEEeecC-----------
Confidence 246677777777799999999999999999999999999999999999999999999999999875321
Q ss_pred ccccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC---CCCCCCchhhHh
Q 024439 147 TRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP---HIPTRDSKLTRL 223 (267)
Q Consensus 147 ~~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~---~ipyr~SkLT~l 223 (267)
.+....|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++. |||||+||||+|
T Consensus 288 ----------~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~L 357 (403)
T 4etp_A 288 ----------TGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYL 357 (403)
T ss_dssp ----------TCCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTTSCCCGGGSHHHHH
T ss_pred ----------CCCeeEEEEEEEECCCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcCCcccchHHHH
Confidence 1134679999999999999999999999999999999999999999999987654 999999999999
Q ss_pred hHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhc
Q 024439 224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRIS 265 (267)
Q Consensus 224 L~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~ 265 (267)
|||+|||||+|+||+||+|+..+++||++||+||+|++.+..
T Consensus 358 LqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~ 399 (403)
T 4etp_A 358 LQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRL 399 (403)
T ss_dssp TGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC--
T ss_pred HHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999998764
No 26
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=2.5e-67 Score=462.25 Aligned_cols=230 Identities=33% Similarity=0.492 Sum_probs=184.7
Q ss_pred CcccCCccCccccccccCC--CCCCCcChHHHHHHHHHHhcccC------CCeEEEEEEEEecCceeecCCCCCCCcCcc
Q 024439 1 MAYGQTGTGKTYTLGRLGK--DDASERGIMVRALEDIISSMSVT------SDSVEVSYLQLYMESIQDLLAPEKVNIPIN 72 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~--~~~~~~Gli~r~~~~lf~~~~~~------~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~ 72 (267)
||||||||||||||+|... ..++++|||||++++||+.+... .+.|++||+|||||+++|||++......+
T Consensus 99 fAYGQTGSGKTyTM~g~~~~~~~~~~~GIipra~~~LF~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~- 177 (344)
T 3dc4_A 99 LAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMPMV- 177 (344)
T ss_dssp EEESSTTSSHHHHHTCSCGGGSCGGGCCHHHHHHHHHHHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCTTSBCC-
T ss_pred EEecCCCCCCCeEEcCCCCCCCCcccCCcHHHHHHHHHHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCCCCccc-
Confidence 7999999999999977432 23577899999999999987532 36899999999999999999985432111
Q ss_pred cCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCC
Q 024439 73 EDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELP 152 (267)
Q Consensus 73 ~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 152 (267)
.....++++++|.+++|++.+|+.|.++|..+++.+|..|||||+||+|+|.+.
T Consensus 178 ------~~~~~~~~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~-------------------- 231 (344)
T 3dc4_A 178 ------AARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK-------------------- 231 (344)
T ss_dssp ------SSTTTCSCCEECSSHHHHHHHHHHHHHTCC----------CCEEEEEEEEEECS--------------------
T ss_pred ------cccccCceecccCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEec--------------------
Confidence 134568999999999999999999999999999999999999999999999642
Q ss_pred CCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCC
Q 024439 153 GDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSA 232 (267)
Q Consensus 153 ~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~ 232 (267)
...|+|+||||||||+..+++..+.+.+|+..||+||.+|++||.+|++++.|||||+||||+||||+||||+
T Consensus 232 -------~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~lLqdsLgGns 304 (344)
T 3dc4_A 232 -------THHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQS 304 (344)
T ss_dssp -------SCEEEEEEEECCCCCCC-------------CCSCCHHHHHHHHHHHHHTTCSSCCGGGSHHHHHTTTTSSTTC
T ss_pred -------CcEEEEEEEECCCCccccccccccchhHHHHHHhHhHHHHHHHHHHHhccCCcCCccccHHHHHHHHHhCCCC
Confidence 1468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439 233 RTSLIITVGPSARNHAETTSTIMFGQRGSIRI 264 (267)
Q Consensus 233 ~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~ 264 (267)
+|+||+||+|+..+++||++||+||+|+++..
T Consensus 305 kt~mIa~isP~~~~~~ETlsTL~fA~ra~~~~ 336 (344)
T 3dc4_A 305 YLTFLACISPHQCDLSETLSTLRFGTSAKAAA 336 (344)
T ss_dssp EEEEEEEECCCGGGHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEeCCchhhHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999864
No 27
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=1.7e-66 Score=466.60 Aligned_cols=234 Identities=33% Similarity=0.468 Sum_probs=198.7
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCCCcCcc--c
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKVNIPIN--E 73 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~--~ 73 (267)
||||||||||||||+| .++++|||||++++||..+.. ..+.|.+||+|||||+|+|||++...++.++ +
T Consensus 143 fAYGqTGSGKTyTM~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~i~~~~ 218 (412)
T 3u06_A 143 FAYGQTGSGKTYTMDG----VPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAK 218 (412)
T ss_dssp EEESSTTSSHHHHHTE----ETTEECHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSCCCCCEEECS
T ss_pred EEecCCCCCCeeEecC----CCCCCccHHHHHHHHHHhhhhhcccCceEEEEEEEEEEeCCeeEEcCCCCCCCceeeeee
Confidence 7999999999999966 345789999999999998753 3568999999999999999999877766665 4
Q ss_pred CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439 74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG 153 (267)
Q Consensus 74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
++. +.+++.|++++.|.+++|+..+|..|..+|..++|.+|..|||||+||+|+|.+....
T Consensus 219 ~~~-~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~------------------ 279 (412)
T 3u06_A 219 NNK-NDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAE------------------ 279 (412)
T ss_dssp SCT-TSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETT------------------
T ss_pred cCC-CCEEEcceEEEEeCCHHHHHHHHHHHHhcccccccCCCCCCcCceEEEEEEEEEEeCC------------------
Confidence 554 4599999999999999999999999999999999999999999999999999875322
Q ss_pred CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439 154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233 (267)
Q Consensus 154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~ 233 (267)
......|+|+||||||||+.. .+.+++|+..||+||.+|++||.+|++++.|||||+||||+||||+||||++
T Consensus 280 ---~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~LLqdsLgGnsk 352 (412)
T 3u06_A 280 ---KQEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSK 352 (412)
T ss_dssp ---TTEEEEEEEEEEECCCCCC--------------CTTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGTSTTCE
T ss_pred ---CCCEEEEEEEEEECCCCCcCC----ccchhHhHHHHhHHHHHHHHHHHHHhccCCCCCccccHHHHHHHHhcCCCce
Confidence 123567999999999999864 3568899999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439 234 TSLIITVGPSARNHAETTSTIMFGQRGSIRI 264 (267)
Q Consensus 234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~ 264 (267)
|+||+||+|...+++||++||+||+|++.|.
T Consensus 353 t~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~ 383 (412)
T 3u06_A 353 TLMFINVSPFQDCFQESVKSLRFAASVNSCK 383 (412)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999886
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=1.3e-64 Score=487.45 Aligned_cols=237 Identities=32% Similarity=0.545 Sum_probs=196.0
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-----CCeEEEEEEEEecCceeecCCCC---CCCcCcc
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-----SDSVEVSYLQLYMESIQDLLAPE---KVNIPIN 72 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-----~~~v~~S~~EIy~e~v~DLL~~~---~~~~~i~ 72 (267)
||||||||||||||+| +++|||||++++||+.+... .+.|++||+|||||+|+|||+|. ...+.++
T Consensus 467 ~ayGqtgsGKT~Tm~g------~~~Giipr~~~~lf~~~~~~~~~~~~~~v~~s~~Eiyne~i~DLl~~~~~~~~~~~~~ 540 (715)
T 4h1g_A 467 FAYGQTGSGKTFTMSH------PTNGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNPKIDPNTKYEIK 540 (715)
T ss_dssp EEESSTTSSHHHHHHC------TTTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEESSSCCCCTTCCCCEE
T ss_pred EccCCCCCchhhccCC------CCCCcHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEECCEEEECCCCCCCCCCcceeE
Confidence 7999999999999965 25799999999999987542 35799999999999999999975 3456778
Q ss_pred cCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCC
Q 024439 73 EDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELP 152 (267)
Q Consensus 73 ~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 152 (267)
+++..|.+++.|++++.|.|++|++.+|..|.++|+.++|.+|..|||||+||+|+|.+....
T Consensus 541 ~~~~~g~~~v~~l~~~~v~~~~~~~~~~~~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~~----------------- 603 (715)
T 4h1g_A 541 HDDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAATKSNDHSSRSHSIFIIDLQGYNSL----------------- 603 (715)
T ss_dssp EETTTTEEEETTCCCEECSCHHHHHHHHHHHHCC----------CGGGSEEEEEEEEEEEETT-----------------
T ss_pred EecCCCCEEEeCCEEEEcCCHHHHHHHHHHHHhccCcccccccCccccccEEEEEEEEEEecC-----------------
Confidence 877788899999999999999999999999999999999999999999999999999875321
Q ss_pred CCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCCC
Q 024439 153 GDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGS 231 (267)
Q Consensus 153 ~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g~ 231 (267)
......|+|+|||||||||..+++..+.+++|+..||+||.+|++||.+|+.+ ..|||||+||||+||||+||||
T Consensus 604 ----~~~~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L~~vi~al~~~~~~~vpyR~SkLT~lL~~slggn 679 (715)
T 4h1g_A 604 ----TKESSYGTLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCLGDVIHSLNLKDGSHVPYRNSKLTYLLKHSLGGN 679 (715)
T ss_dssp ----TCCEEEEEEEEEECCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHCSCCCCCGGGCHHHHHTGGGTSTT
T ss_pred ----CCCEeEEEEEEEeCCCcccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCccCHHHHHHHhhcCCC
Confidence 12346799999999999999999999999999999999999999999999854 5799999999999999999999
Q ss_pred CeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439 232 ARTSLIITVGPSARNHAETTSTIMFGQRGSIRI 264 (267)
Q Consensus 232 ~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~ 264 (267)
|+|+||+||||...+++||++||+||+|+++|+
T Consensus 680 ~~t~~i~~isp~~~~~~et~~tL~fa~r~~~i~ 712 (715)
T 4h1g_A 680 SKTLMFVNISPLTKDLNETINSLRFATKVNNTR 712 (715)
T ss_dssp CEEEEEEEECCBGGGHHHHHHHHHHHHHHCC--
T ss_pred ceEEEEEEECCChhhHHHHHHHHHHHHHhccce
Confidence 999999999999999999999999999999994
No 29
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.94 E-value=6e-28 Score=173.47 Aligned_cols=76 Identities=53% Similarity=0.761 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 191 FINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 191 ~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
.||+||.+|++||.+|+++ ..||||||||||++|+|+|||+++|+||+||+|...+++||++||+||+|+++|.|.
T Consensus 3 ~IN~SL~~Lg~vI~aL~~~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~~~ 79 (100)
T 2kin_B 3 NINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNT 79 (100)
T ss_dssp BSSHHHHHHHHHHHHHHHTCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEE
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhccCc
Confidence 4899999999999999987 579999999999999999999999999999999999999999999999999999874
No 30
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.92 E-value=4.1e-26 Score=169.57 Aligned_cols=74 Identities=54% Similarity=0.813 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHhcCC-CCCCCCCchhhHhhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439 193 NLSLSSLGKCINALAENS-PHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV 266 (267)
Q Consensus 193 n~sl~~L~~vi~~l~~~~-~~ipyr~SkLT~lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~ 266 (267)
|+||.+|++||.+|++++ .|||||+||||++|+|+|||+++|+||+||+|...+++||++||+||+|+++|.|.
T Consensus 1 N~SL~~Lg~vi~aL~~~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~ 75 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNT 75 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCC
Confidence 689999999999999874 69999999999999999999999999999999999999999999999999999884
No 31
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=99.32 E-value=3.3e-12 Score=106.98 Aligned_cols=188 Identities=12% Similarity=0.155 Sum_probs=120.6
Q ss_pred CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc---CCCeEEEEEEEEe-cCceeecCCCC--CCCcCcccC
Q 024439 1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV---TSDSVEVSYLQLY-MESIQDLLAPE--KVNIPINED 74 (267)
Q Consensus 1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~---~~~~v~~S~~EIy-~e~v~DLL~~~--~~~~~i~~~ 74 (267)
||||||||||| ||++..+|..... +.+.+.+||+||| ||.++|||... +....++.+
T Consensus 97 fSyGQTGsGKT-----------------~ral~q~f~~~~~~~~~~Y~~tlq~veLy~Ne~~~DLL~~~~~~~k~eIk~~ 159 (298)
T 2o0a_A 97 ISLSTTPHGSL-----------------RESLIKFLAEKDTIYQKQYVITLQFVFLSDDEFSQDMLLDYSHNDKDSIKLK 159 (298)
T ss_dssp EEECSSCCHHH-----------------HHHHHHHHHSTTSHHHHHEEEEEEEEEEECC-CEEETTSCCC------CEEE
T ss_pred EEECCCCCCcc-----------------HHHHHHHHHHhhhhcccceEEEEEEEEEecCCchHHhcCCCCCCCcceEEec
Confidence 69999999999 9999999999866 7889999999999 99999999632 224566655
Q ss_pred CCCCCccCCCCeEEEeCC-HHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439 75 PKTGEVSLPGATVVKLRD-LDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG 153 (267)
Q Consensus 75 ~~~g~~~i~~l~~~~v~s-~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
. +|...+.|++.++|.+ ++|+..++.-+..- .. ..+.-.|+.+.+........
T Consensus 160 ~-~g~~iv~~s~~i~V~~~~edv~~~~~~~~~~------~~---~~~gi~i~k~~~~~~~~~~~---------------- 213 (298)
T 2o0a_A 160 F-EKHSISLDSKLVIIENGLEDLPLNFSCDEHP------NL---PHSGMGIIKVQFFPRDSKSD---------------- 213 (298)
T ss_dssp E-CSSCEEEESCCEEESSGGGGSCTTTTCC----------------CEEEEEEEEEEESCC-------------------
T ss_pred C-CCCEEecccEEEEccccHHHHHHHhhccccc------cc---CCCCceEEEEEEecCccccc----------------
Confidence 3 4668899999999999 89988777221111 01 11345666666644211100
Q ss_pred CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439 154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233 (267)
Q Consensus 154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~ 233 (267)
++. ...---++|+.+.... ++..|.+ ++..+ .+-.|+++-+|+-.|.- .+
T Consensus 214 ~~~--~~~~~d~yf~e~~~~~--------------------~~~~l~~---~~~~~----~~~~spi~~il~~ll~~-tk 263 (298)
T 2o0a_A 214 GNN--DPVPVDFYFIELNNLK--------------------SIEQFDK---SIFKK----ESCETPIALVLKKLISD-TK 263 (298)
T ss_dssp ------CCCEEEEEEEECSHH--------------------HHHHHHH---HHHTC-----CCCSHHHHHHHHHHHH-SB
T ss_pred ccC--CCCceEEEEEEeCCHH--------------------HHHHHHh---hcccc----cccCCcHHHHHHHHHhc-Cc
Confidence 000 0112357888875421 2333433 22222 45678999999988865 67
Q ss_pred EEEEEEeCCCCCChHHHHHHhHHHHHhhhhhc
Q 024439 234 TSLIITVGPSARNHAETTSTIMFGQRGSIRIS 265 (267)
Q Consensus 234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~ 265 (267)
-++++++.-... --.-|..++++.++.|
T Consensus 264 s~~~~~l~~~~~----~~~lL~~s~~i~~~~~ 291 (298)
T 2o0a_A 264 SFFLLNLNDSKN----VNKLLTISEEVQTQLC 291 (298)
T ss_dssp CEEEEEECCGGG----HHHHHHHHHHHHHHTC
T ss_pred ceEEEEecCCCc----hhHHHHHHHHhhcccC
Confidence 789999975322 2336888888888765
No 32
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=84.52 E-value=0.22 Score=37.58 Aligned_cols=12 Identities=42% Similarity=0.869 Sum_probs=11.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
||++|+|||+.+
T Consensus 42 ~G~~G~GKTtL~ 53 (149)
T 2kjq_A 42 WGEEGAGKSHLL 53 (149)
T ss_dssp ESSSTTTTCHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999998
No 33
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=84.43 E-value=0.19 Score=38.78 Aligned_cols=12 Identities=42% Similarity=0.556 Sum_probs=11.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
||++|+|||+.+
T Consensus 44 ~G~~G~GKTtL~ 55 (180)
T 3ec2_A 44 VGSPGVGKTHLA 55 (180)
T ss_dssp CCSSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999998
No 34
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=78.87 E-value=0.39 Score=37.63 Aligned_cols=13 Identities=54% Similarity=0.784 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 59 l~G~~GtGKT~la 71 (202)
T 2w58_A 59 LHGSFGVGKTYLL 71 (202)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999988
No 35
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=77.38 E-value=0.46 Score=40.41 Aligned_cols=13 Identities=54% Similarity=1.058 Sum_probs=12.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+||||.+
T Consensus 157 l~G~~GtGKT~La 169 (308)
T 2qgz_A 157 LYGDMGIGKSYLL 169 (308)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999998
No 36
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=76.56 E-value=0.5 Score=38.58 Aligned_cols=13 Identities=38% Similarity=0.473 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 54 l~G~~G~GKTtl~ 66 (254)
T 1ixz_A 54 LVGPPGVGKTHLA 66 (254)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999987
No 37
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=76.39 E-value=0.51 Score=39.17 Aligned_cols=12 Identities=50% Similarity=0.828 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+++
T Consensus 31 ~Gp~GsGKSTll 42 (261)
T 2eyu_A 31 TGPTGSGKSTTI 42 (261)
T ss_dssp ECSTTCSHHHHH
T ss_pred ECCCCccHHHHH
Confidence 599999999998
No 38
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=76.31 E-value=0.51 Score=35.94 Aligned_cols=13 Identities=38% Similarity=0.626 Sum_probs=11.9
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 48 l~G~~G~GKT~l~ 60 (195)
T 1jbk_A 48 LIGEPGVGKTAIV 60 (195)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999998
No 39
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.15 E-value=1.6 Score=39.01 Aligned_cols=43 Identities=23% Similarity=0.259 Sum_probs=29.8
Q ss_pred cccCCccCcccccc------cc-------CCCCCCCcChHHHHHHHHHHhcccCCC
Q 024439 2 AYGQTGTGKTYTLG------RL-------GKDDASERGIMVRALEDIISSMSVTSD 44 (267)
Q Consensus 2 ayG~tgSGKT~Tl~------G~-------~~~~~~~~Gli~r~~~~lf~~~~~~~~ 44 (267)
-|||.|+|||...- |. ..-...-.|--.+.++++|........
T Consensus 211 L~GPPGtGKT~lakAiA~~~~~~~~~v~~~~l~~~~~Ge~e~~ir~lF~~A~~~aP 266 (428)
T 4b4t_K 211 LYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAP 266 (428)
T ss_dssp EESCTTTTHHHHHHHHHHHHTCEEEEEEGGGTCCSSCSHHHHHHHHHHHHHHHTCS
T ss_pred EECCCCCCHHHHHHHHHHHhCCCeEEEecchhhccccchhHHHHHHHHHHHHHcCC
Confidence 49999999998861 10 111233458888999999998766544
No 40
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=75.24 E-value=0.52 Score=35.85 Aligned_cols=13 Identities=38% Similarity=0.624 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 48 l~G~~G~GKT~la 60 (187)
T 2p65_A 48 LLGDPGVGKTAIV 60 (187)
T ss_dssp EESCGGGCHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999988
No 41
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=73.95 E-value=0.65 Score=37.02 Aligned_cols=13 Identities=23% Similarity=0.534 Sum_probs=11.9
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 57 l~G~~G~GKT~la 69 (242)
T 3bos_A 57 LWGPVKSGRTHLI 69 (242)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999998
No 42
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=73.61 E-value=0.65 Score=35.58 Aligned_cols=12 Identities=33% Similarity=0.603 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 15 ~G~nGsGKSTl~ 26 (171)
T 4gp7_A 15 IGSSGSGKSTFA 26 (171)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999998
No 43
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=73.51 E-value=0.71 Score=37.89 Aligned_cols=13 Identities=46% Similarity=0.593 Sum_probs=11.9
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 49 l~G~~GtGKT~la 61 (268)
T 2r62_A 49 LVGPPGTGKTLLA 61 (268)
T ss_dssp CBCSSCSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 4899999999997
No 44
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=73.36 E-value=0.68 Score=40.35 Aligned_cols=12 Identities=58% Similarity=0.861 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+++
T Consensus 129 ~GptGSGKTTlL 140 (356)
T 3jvv_A 129 TGPTGSGKSTTL 140 (356)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999999
No 45
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=73.24 E-value=0.7 Score=35.84 Aligned_cols=12 Identities=50% Similarity=0.756 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+++
T Consensus 7 ~GpsGaGKsTl~ 18 (186)
T 3a00_A 7 SGPSGTGKSTLL 18 (186)
T ss_dssp ESSSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 46
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=72.69 E-value=0.74 Score=39.08 Aligned_cols=13 Identities=62% Similarity=0.915 Sum_probs=12.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 42 l~G~~GtGKT~la 54 (324)
T 1l8q_A 42 IYGSVGTGKTHLL 54 (324)
T ss_dssp EECSSSSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 4899999999998
No 47
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=72.20 E-value=0.75 Score=38.17 Aligned_cols=13 Identities=38% Similarity=0.473 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 78 l~Gp~GtGKTtl~ 90 (278)
T 1iy2_A 78 LVGPPGVGKTHLA 90 (278)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCcChHHHHH
Confidence 3899999999987
No 48
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=71.83 E-value=0.77 Score=37.35 Aligned_cols=13 Identities=38% Similarity=0.544 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 44 l~G~~GtGKT~la 56 (262)
T 2qz4_A 44 LLGPPGCGKTLLA 56 (262)
T ss_dssp EESCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999987
No 49
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=71.66 E-value=0.77 Score=35.84 Aligned_cols=12 Identities=33% Similarity=0.501 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 13 ~Gp~GsGKSTl~ 24 (205)
T 3tr0_A 13 SAPSGAGKTSLV 24 (205)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 499999999987
No 50
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=71.59 E-value=0.79 Score=36.08 Aligned_cols=12 Identities=42% Similarity=0.703 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 10 vGpsGaGKSTLl 21 (198)
T 1lvg_A 10 SGPSGAGKSTLL 21 (198)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999998
No 51
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=71.52 E-value=0.79 Score=37.44 Aligned_cols=13 Identities=46% Similarity=0.606 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 50 l~G~~GtGKT~la 62 (257)
T 1lv7_A 50 MVGPPGTGKTLLA 62 (257)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECcCCCCHHHHH
Confidence 3899999999986
No 52
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=71.51 E-value=0.73 Score=34.14 Aligned_cols=13 Identities=15% Similarity=0.151 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 32 l~G~~GtGKt~lA 44 (143)
T 3co5_A 32 LTGEAGSPFETVA 44 (143)
T ss_dssp EEEETTCCHHHHH
T ss_pred EECCCCccHHHHH
Confidence 3899999999987
No 53
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=70.94 E-value=0.91 Score=33.65 Aligned_cols=13 Identities=38% Similarity=0.685 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 29 l~G~~GtGKt~lA 41 (145)
T 3n70_A 29 LYGAPGTGRMTGA 41 (145)
T ss_dssp EESSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999887
No 54
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=70.78 E-value=0.85 Score=35.57 Aligned_cols=13 Identities=54% Similarity=0.585 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 43 l~G~~G~GKT~l~ 55 (226)
T 2chg_A 43 FSGPPGTGKTATA 55 (226)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999988
No 55
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=70.73 E-value=0.84 Score=35.20 Aligned_cols=12 Identities=25% Similarity=0.470 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 11 ~GpsGsGKSTL~ 22 (180)
T 1kgd_A 11 LGAHGVGRRHIK 22 (180)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 56
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=70.60 E-value=0.85 Score=40.64 Aligned_cols=12 Identities=58% Similarity=0.861 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||++|
T Consensus 173 ~GpnGSGKTTlL 184 (418)
T 1p9r_A 173 TGPTGSGKSTTL 184 (418)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999999
No 57
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=69.65 E-value=2 Score=38.44 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=28.7
Q ss_pred cccCCccCccccc------ccc-------CCCCCCCcChHHHHHHHHHHhcccCCC
Q 024439 2 AYGQTGTGKTYTL------GRL-------GKDDASERGIMVRALEDIISSMSVTSD 44 (267)
Q Consensus 2 ayG~tgSGKT~Tl------~G~-------~~~~~~~~Gli~r~~~~lf~~~~~~~~ 44 (267)
-|||.|+|||... .|. ..-...-.|--.+.++.+|........
T Consensus 220 LyGPPGTGKTllAkAiA~e~~~~f~~v~~s~l~~~~vGese~~ir~lF~~A~~~aP 275 (434)
T 4b4t_M 220 MYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAP 275 (434)
T ss_dssp EESCTTSSHHHHHHHHHHHHTCEEEEEEGGGGCSSCSSHHHHHHHHHHHHHHHHCS
T ss_pred EECcCCCCHHHHHHHHHHHhCCCEEEEehhhhhhcccchHHHHHHHHHHHHHhcCC
Confidence 4999999999886 110 001123457778999999987665443
No 58
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=69.65 E-value=2.6 Score=37.31 Aligned_cols=44 Identities=23% Similarity=0.213 Sum_probs=30.0
Q ss_pred cccCCccCccccc------ccc-------CCCCCCCcChHHHHHHHHHHhcccCCCe
Q 024439 2 AYGQTGTGKTYTL------GRL-------GKDDASERGIMVRALEDIISSMSVTSDS 45 (267)
Q Consensus 2 ayG~tgSGKT~Tl------~G~-------~~~~~~~~Gli~r~~~~lf~~~~~~~~~ 45 (267)
-|||.|+|||... .|. ..-...-.|--.+.++++|.........
T Consensus 187 L~GPPGTGKTllAkAiA~e~~~~f~~v~~s~l~sk~vGese~~vr~lF~~Ar~~aP~ 243 (405)
T 4b4t_J 187 LYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS 243 (405)
T ss_dssp EESCSSSSHHHHHHHHHHHHTCEEEEEEGGGGSCSSTTHHHHHHHHHHHHHHHTCSE
T ss_pred EeCCCCCCHHHHHHHHHHhhCCCceEEEhHHhhccccchHHHHHHHHHHHHHHhCCc
Confidence 4999999999985 111 0111233577789999999988766543
No 59
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=69.60 E-value=0.93 Score=38.83 Aligned_cols=12 Identities=42% Similarity=0.487 Sum_probs=11.4
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
||+.|+|||+.+
T Consensus 57 ~Gp~G~GKTTLa 68 (334)
T 1in4_A 57 AGPPGLGKTTLA 68 (334)
T ss_dssp ESSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 899999999987
No 60
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=69.55 E-value=0.91 Score=41.59 Aligned_cols=12 Identities=58% Similarity=0.794 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||++|
T Consensus 266 ~GptGSGKTTlL 277 (511)
T 2oap_1 266 VGETASGKTTTL 277 (511)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999998
No 61
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=69.15 E-value=0.99 Score=37.35 Aligned_cols=13 Identities=54% Similarity=0.820 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+.+
T Consensus 56 l~G~~GtGKT~la 68 (285)
T 3h4m_A 56 LYGPPGTGKTLLA 68 (285)
T ss_dssp EESSSSSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 3899999999987
No 62
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=68.60 E-value=1 Score=39.39 Aligned_cols=12 Identities=50% Similarity=0.828 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+++
T Consensus 142 vG~~GsGKTTll 153 (372)
T 2ewv_A 142 TGPTGSGKSTTI 153 (372)
T ss_dssp ECSSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999999
No 63
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=68.58 E-value=1 Score=37.16 Aligned_cols=13 Identities=31% Similarity=0.266 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 69 l~G~~GtGKT~la 81 (272)
T 1d2n_A 69 LEGPPHSGKTALA 81 (272)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 3899999999987
No 64
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=68.16 E-value=3.2 Score=37.16 Aligned_cols=43 Identities=21% Similarity=0.191 Sum_probs=29.2
Q ss_pred cccCCccCccccc------ccc-------CCCCCCCcChHHHHHHHHHHhcccCCC
Q 024439 2 AYGQTGTGKTYTL------GRL-------GKDDASERGIMVRALEDIISSMSVTSD 44 (267)
Q Consensus 2 ayG~tgSGKT~Tl------~G~-------~~~~~~~~Gli~r~~~~lf~~~~~~~~ 44 (267)
-|||.|+|||... .|. ..--..-.|--.+.++.+|........
T Consensus 220 L~GPPGtGKTllAkAiA~e~~~~~~~v~~s~l~sk~~Gese~~ir~~F~~A~~~~P 275 (437)
T 4b4t_L 220 LYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEP 275 (437)
T ss_dssp EESCTTSSHHHHHHHHHHHHTCEEEEEEGGGTCCSSSSHHHHHHHHHHHHHHHSCS
T ss_pred EECCCCCcHHHHHHHHHHHhCCCEEEEehhhhccccchHHHHHHHHHHHHHHhcCC
Confidence 4999999999875 111 111123457778899999998766544
No 65
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=67.95 E-value=1 Score=37.71 Aligned_cols=13 Identities=46% Similarity=0.552 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 72 l~G~~GtGKT~la 84 (309)
T 3syl_A 72 FTGNPGTGKTTVA 84 (309)
T ss_dssp EEECTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999987
No 66
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=67.80 E-value=1.1 Score=37.75 Aligned_cols=13 Identities=46% Similarity=0.715 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 54 L~Gp~GtGKT~la 66 (301)
T 3cf0_A 54 FYGPPGCGKTLLA 66 (301)
T ss_dssp EECSSSSSHHHHH
T ss_pred EECCCCcCHHHHH
Confidence 4899999999986
No 67
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=67.56 E-value=1.2 Score=35.23 Aligned_cols=12 Identities=33% Similarity=0.520 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 28 ~G~sGsGKSTl~ 39 (208)
T 3c8u_A 28 SGAPGSGKSTLS 39 (208)
T ss_dssp ECCTTSCTHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 68
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=67.55 E-value=1.1 Score=38.30 Aligned_cols=13 Identities=62% Similarity=0.943 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||+.|+|||+++
T Consensus 51 l~Gp~G~GKTtla 63 (340)
T 1sxj_C 51 FYGPPGTGKTSTI 63 (340)
T ss_dssp EECSSSSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999998
No 69
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=67.53 E-value=1.1 Score=37.37 Aligned_cols=13 Identities=46% Similarity=0.562 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 55 l~G~~GtGKT~la 67 (310)
T 1ofh_A 55 MIGPTGVGKTEIA 67 (310)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999987
No 70
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=67.27 E-value=1.1 Score=35.33 Aligned_cols=12 Identities=25% Similarity=0.493 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 26 ~GpnGsGKSTLl 37 (207)
T 1znw_A 26 SGPSAVGKSTVV 37 (207)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999988
No 71
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=67.20 E-value=1.1 Score=37.30 Aligned_cols=39 Identities=23% Similarity=0.248 Sum_probs=23.9
Q ss_pred cccCCccCccccc------cccC------CCC-CCCcChHHHHHHHHHHhcc
Q 024439 2 AYGQTGTGKTYTL------GRLG------KDD-ASERGIMVRALEDIISSMS 40 (267)
Q Consensus 2 ayG~tgSGKT~Tl------~G~~------~~~-~~~~Gli~r~~~~lf~~~~ 40 (267)
-||+.|+|||+.+ .+.+ ..- ....|-..+.+..+|+...
T Consensus 49 L~Gp~GtGKTtLakala~~~~~~~i~i~g~~l~~~~~~~~~~~i~~vf~~a~ 100 (274)
T 2x8a_A 49 LAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAK 100 (274)
T ss_dssp EESSTTSCHHHHHHHHHHHTTCEEEEEETTTTCSSTTHHHHHHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHHHHcCCCEEEEEcHHHHhhhhhHHHHHHHHHHHHHH
Confidence 3899999999986 1111 110 1123455677888888753
No 72
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=66.83 E-value=1.1 Score=34.66 Aligned_cols=12 Identities=42% Similarity=0.667 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 6 ~G~nGsGKTTLl 17 (178)
T 1ye8_A 6 TGEPGVGKTTLV 17 (178)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999998
No 73
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=66.15 E-value=1.2 Score=39.78 Aligned_cols=13 Identities=54% Similarity=0.787 Sum_probs=12.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 135 l~Gp~G~GKTtLa 147 (440)
T 2z4s_A 135 IYGGVGLGKTHLL 147 (440)
T ss_dssp EECSSSSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999998
No 74
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=66.05 E-value=1.2 Score=41.91 Aligned_cols=12 Identities=58% Similarity=0.780 Sum_probs=11.2
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.||.|||||+|+
T Consensus 211 ~GPPGTGKT~ti 222 (646)
T 4b3f_X 211 HGPPGTGKTTTV 222 (646)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999997
No 75
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=66.04 E-value=1.2 Score=35.24 Aligned_cols=12 Identities=33% Similarity=0.479 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+++
T Consensus 14 ~GpsGsGKsTl~ 25 (208)
T 3tau_A 14 SGPSGVGKGTVR 25 (208)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 599999999987
No 76
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=65.84 E-value=1.3 Score=36.99 Aligned_cols=13 Identities=38% Similarity=0.700 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 59 l~Gp~GtGKT~la 71 (297)
T 3b9p_A 59 LFGPPGNGKTLLA 71 (297)
T ss_dssp EESSSSSCHHHHH
T ss_pred EECcCCCCHHHHH
Confidence 3899999999986
No 77
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=65.68 E-value=1.2 Score=35.51 Aligned_cols=12 Identities=33% Similarity=0.620 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 29 vGpsGsGKSTLl 40 (218)
T 1z6g_A 29 CGPSGVGKGTLI 40 (218)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999988
No 78
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=65.56 E-value=1.1 Score=36.15 Aligned_cols=13 Identities=46% Similarity=0.631 Sum_probs=11.1
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||..+
T Consensus 81 i~g~TGsGKTt~~ 93 (235)
T 3llm_A 81 IRGATGCGKTTQV 93 (235)
T ss_dssp EECCTTSSHHHHH
T ss_pred EEeCCCCCcHHhH
Confidence 4699999999876
No 79
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=65.56 E-value=1.4 Score=35.32 Aligned_cols=12 Identities=33% Similarity=0.421 Sum_probs=7.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 33 ~Gp~GsGKSTl~ 44 (231)
T 3lnc_A 33 SSPSGCGKTTVA 44 (231)
T ss_dssp ECSCC----CHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 80
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=65.37 E-value=1.3 Score=37.23 Aligned_cols=13 Identities=31% Similarity=0.782 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 41 l~GppGtGKT~la 53 (293)
T 3t15_A 41 IWGGKGQGKSFQC 53 (293)
T ss_dssp EEECTTSCHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999987
No 81
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=64.75 E-value=1.3 Score=34.85 Aligned_cols=13 Identities=38% Similarity=0.447 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+.+
T Consensus 50 l~G~~G~GKT~l~ 62 (250)
T 1njg_A 50 FSGTRGVGKTSIA 62 (250)
T ss_dssp EECSTTSCHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999987
No 82
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=63.80 E-value=1.4 Score=37.36 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=25.3
Q ss_pred cccCCccCcccccccc------CC-------CCCCCcChHHHHHHHHHHhcccCC
Q 024439 2 AYGQTGTGKTYTLGRL------GK-------DDASERGIMVRALEDIISSMSVTS 43 (267)
Q Consensus 2 ayG~tgSGKT~Tl~G~------~~-------~~~~~~Gli~r~~~~lf~~~~~~~ 43 (267)
-||++|+|||+..-.. .. -.....|-....++.+|.......
T Consensus 56 l~GppGtGKT~la~aia~~~~~~~~~v~~~~l~~~~~g~~~~~~~~~f~~a~~~~ 110 (322)
T 3eie_A 56 LYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENK 110 (322)
T ss_dssp EECSSSSCHHHHHHHHHHHHTCEEEEEEHHHHHTTTGGGHHHHHHHHHHHHHHTS
T ss_pred EECCCCCcHHHHHHHHHHHHCCCEEEEchHHHhhcccchHHHHHHHHHHHHHhcC
Confidence 4899999999987110 00 001223556677778887765543
No 83
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=63.57 E-value=1.4 Score=34.62 Aligned_cols=12 Identities=42% Similarity=0.440 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||+.+
T Consensus 12 ~G~~GsGKSTl~ 23 (211)
T 3asz_A 12 AGGTASGKTTLA 23 (211)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999988
No 84
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=63.50 E-value=1.1 Score=38.43 Aligned_cols=13 Identities=8% Similarity=-0.054 Sum_probs=12.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||.++
T Consensus 50 i~GpPGTGKT~~v 62 (318)
T 3te6_A 50 ITNADDSTKFQLV 62 (318)
T ss_dssp EECCCSHHHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999998
No 85
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=63.30 E-value=1.5 Score=37.39 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=24.2
Q ss_pred cccCCccCcccccc-------ccCC-----C--CCCCcChHHHHHHHHHHhcccC
Q 024439 2 AYGQTGTGKTYTLG-------RLGK-----D--DASERGIMVRALEDIISSMSVT 42 (267)
Q Consensus 2 ayG~tgSGKT~Tl~-------G~~~-----~--~~~~~Gli~r~~~~lf~~~~~~ 42 (267)
-||+.|+|||+..- +... . .....|-....++.+|......
T Consensus 50 L~GppGtGKT~la~ala~~~~~~~~~~i~~~~l~~~~~g~~~~~~~~lf~~a~~~ 104 (322)
T 1xwi_A 50 LFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLAREN 104 (322)
T ss_dssp EESSSSSCHHHHHHHHHHHTTSCEEEEEECCSSCCSSCCSCHHHHHHHHHHHHHT
T ss_pred EECCCCccHHHHHHHHHHHcCCCcEEEEEhHHHHhhhhhHHHHHHHHHHHHHHhc
Confidence 48999999999861 1100 0 0112355566777777765443
No 86
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=63.25 E-value=1.6 Score=37.13 Aligned_cols=13 Identities=38% Similarity=0.856 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 50 l~G~~GtGKT~la 62 (350)
T 1g8p_A 50 VFGDRGTGKSTAV 62 (350)
T ss_dssp EECCGGGCTTHHH
T ss_pred EECCCCccHHHHH
Confidence 4899999999987
No 87
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=63.13 E-value=1.4 Score=35.30 Aligned_cols=13 Identities=38% Similarity=0.503 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+..
T Consensus 63 i~GPPGtGKTt~a 75 (212)
T 1tue_A 63 FCGPANTGKSYFG 75 (212)
T ss_dssp EESCGGGCHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4999999999987
No 88
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=63.07 E-value=1.5 Score=38.19 Aligned_cols=12 Identities=50% Similarity=0.794 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||+++
T Consensus 181 vG~sGsGKSTll 192 (361)
T 2gza_A 181 AGETGSGKTTLM 192 (361)
T ss_dssp EESSSSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999998
No 89
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=62.27 E-value=1.6 Score=35.79 Aligned_cols=13 Identities=38% Similarity=0.606 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 34 l~G~~GtGKt~la 46 (265)
T 2bjv_A 34 IIGERGTGKELIA 46 (265)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 3899999999987
No 90
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=62.19 E-value=4.4 Score=36.53 Aligned_cols=43 Identities=21% Similarity=0.244 Sum_probs=28.8
Q ss_pred cccCCccCcccccc------cc-------CCCCCCCcChHHHHHHHHHHhcccCCC
Q 024439 2 AYGQTGTGKTYTLG------RL-------GKDDASERGIMVRALEDIISSMSVTSD 44 (267)
Q Consensus 2 ayG~tgSGKT~Tl~------G~-------~~~~~~~~Gli~r~~~~lf~~~~~~~~ 44 (267)
-||+.|+|||...- |. ..-...-.|--.+.++++|........
T Consensus 248 LyGPPGTGKTlLAkAiA~e~~~~fi~vs~s~L~sk~vGesek~ir~lF~~Ar~~aP 303 (467)
T 4b4t_H 248 LYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 303 (467)
T ss_dssp ECSCTTSSHHHHHHHHHHHHTCEEEEEEGGGGCCCSSSHHHHHHHHHHHHHHHTCS
T ss_pred eeCCCCCcHHHHHHHHHhccCCCeEEEEhHHhhcccCCHHHHHHHHHHHHHHhcCC
Confidence 49999999998751 10 001123357778999999998766543
No 91
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=62.04 E-value=1.6 Score=35.06 Aligned_cols=12 Identities=58% Similarity=0.620 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 36 ~GpnGsGKSTLl 47 (251)
T 2ehv_A 36 TGGTGTGKTTFA 47 (251)
T ss_dssp ECCTTSSHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 699999999987
No 92
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=61.67 E-value=1.6 Score=33.93 Aligned_cols=12 Identities=33% Similarity=0.479 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 12 ~G~~GsGKSTl~ 23 (207)
T 2j41_A 12 SGPSGVGKGTVR 23 (207)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999887
No 93
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=61.28 E-value=1.7 Score=35.32 Aligned_cols=12 Identities=42% Similarity=0.794 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 37 iG~nGsGKSTLl 48 (235)
T 3tif_A 37 MGPSGSGKSTML 48 (235)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999887
No 94
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=61.03 E-value=1.6 Score=37.39 Aligned_cols=12 Identities=50% Similarity=0.750 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||+++
T Consensus 177 ~G~~GsGKTTll 188 (330)
T 2pt7_A 177 CGGTGSGKTTYI 188 (330)
T ss_dssp EESTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999988
No 95
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=61.00 E-value=1.6 Score=33.53 Aligned_cols=12 Identities=33% Similarity=0.603 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 15 ~G~~GsGKSTl~ 26 (191)
T 1zp6_A 15 SGHPGSGKSTIA 26 (191)
T ss_dssp EECTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 96
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=60.89 E-value=4.9 Score=35.91 Aligned_cols=43 Identities=23% Similarity=0.172 Sum_probs=29.4
Q ss_pred cccCCccCccccc------ccc-------CCCCCCCcChHHHHHHHHHHhcccCCC
Q 024439 2 AYGQTGTGKTYTL------GRL-------GKDDASERGIMVRALEDIISSMSVTSD 44 (267)
Q Consensus 2 ayG~tgSGKT~Tl------~G~-------~~~~~~~~Gli~r~~~~lf~~~~~~~~ 44 (267)
-|||.|+|||... .|. ..-...-.|--.+.++++|........
T Consensus 221 LyGPPGTGKTlLAkAiA~e~~~~fi~v~~s~l~sk~vGesek~ir~lF~~Ar~~aP 276 (437)
T 4b4t_I 221 LYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAP 276 (437)
T ss_dssp EESSTTTTHHHHHHHHHHHHTCEEEEEESGGGCCSSSSHHHHHHHHHHHHHHHTCS
T ss_pred eECCCCchHHHHHHHHHHHhCCCEEEEEHHHhhhccCchHHHHHHHHHHHHHhcCC
Confidence 4999999999875 110 001123457788999999998766544
No 97
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=60.85 E-value=1.7 Score=37.03 Aligned_cols=12 Identities=50% Similarity=0.836 Sum_probs=11.4
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
||+.|+|||+++
T Consensus 42 ~Gp~G~GKTtl~ 53 (354)
T 1sxj_E 42 YGPNGTGKKTRC 53 (354)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 899999999997
No 98
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=60.83 E-value=1.7 Score=32.51 Aligned_cols=12 Identities=50% Similarity=0.814 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|+.|||||..+
T Consensus 29 ~G~NGsGKStil 40 (149)
T 1f2t_A 29 IGQNGSGKSSLL 40 (149)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 99
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=60.82 E-value=1.7 Score=36.81 Aligned_cols=12 Identities=50% Similarity=0.720 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+++
T Consensus 106 vG~nGsGKTTll 117 (302)
T 3b9q_A 106 VGVNGGGKTTSL 117 (302)
T ss_dssp ECCTTSCHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 599999999999
No 100
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=60.54 E-value=1.7 Score=34.37 Aligned_cols=12 Identities=42% Similarity=0.761 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|||||+.+
T Consensus 31 ~G~nGsGKSTll 42 (231)
T 4a74_A 31 FGEFGSGKTQLA 42 (231)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999987
No 101
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=60.37 E-value=1.8 Score=37.11 Aligned_cols=13 Identities=62% Similarity=0.823 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 49 l~G~~G~GKT~l~ 61 (387)
T 2v1u_A 49 LYGLTGTGKTAVA 61 (387)
T ss_dssp ECBCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999998
No 102
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=60.20 E-value=1.8 Score=33.33 Aligned_cols=12 Identities=42% Similarity=0.614 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 8 ~G~~GaGKSTl~ 19 (189)
T 2bdt_A 8 TGPAGVGKSTTC 19 (189)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999988
No 103
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=60.18 E-value=1.7 Score=33.16 Aligned_cols=12 Identities=33% Similarity=0.523 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|||||..+
T Consensus 32 ~G~NGsGKStll 43 (182)
T 3kta_A 32 VGANGSGKSNIG 43 (182)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999887
No 104
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=59.87 E-value=1.8 Score=36.65 Aligned_cols=12 Identities=50% Similarity=0.745 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+++
T Consensus 108 vG~nGsGKTTll 119 (304)
T 1rj9_A 108 VGVNGVGKTTTI 119 (304)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999999
No 105
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=59.63 E-value=2.2 Score=33.95 Aligned_cols=12 Identities=50% Similarity=0.908 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 28 iG~nGsGKSTLl 39 (208)
T 3b85_A 28 LGPAGSGKTYLA 39 (208)
T ss_dssp ECCTTSSTTHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999988
No 106
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=58.84 E-value=2 Score=35.85 Aligned_cols=12 Identities=50% Similarity=0.628 Sum_probs=11.2
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|+|||++.
T Consensus 53 ~G~~GtGKt~la 64 (311)
T 4fcw_A 53 LGPTGVGKTELA 64 (311)
T ss_dssp ESCSSSSHHHHH
T ss_pred ECCCCcCHHHHH
Confidence 799999999987
No 107
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=58.40 E-value=2 Score=34.51 Aligned_cols=12 Identities=25% Similarity=0.501 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 22 ~GpsGsGKSTLl 33 (219)
T 1s96_A 22 SAPSGAGKSSLI 33 (219)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999988
No 108
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=57.96 E-value=2 Score=33.43 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=10.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 45 v~apTGsGKT~~~ 57 (206)
T 1vec_A 45 ARAKNGTGKSGAY 57 (206)
T ss_dssp EECCSSSTTHHHH
T ss_pred EECCCCCchHHHH
Confidence 4689999999764
No 109
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=57.70 E-value=2.3 Score=31.78 Aligned_cols=12 Identities=33% Similarity=0.476 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 7 ~G~~GsGKsT~a 18 (179)
T 3lw7_A 7 TGMPGSGKSEFA 18 (179)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 110
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=57.67 E-value=2.1 Score=36.79 Aligned_cols=13 Identities=54% Similarity=0.611 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 75 l~GppGtGKT~la 87 (368)
T 3uk6_A 75 IAGQPGTGKTAIA 87 (368)
T ss_dssp EEESTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999987
No 111
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A
Probab=56.39 E-value=2.1 Score=33.28 Aligned_cols=13 Identities=46% Similarity=0.700 Sum_probs=10.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 43 i~~~TGsGKT~~~ 55 (207)
T 2gxq_A 43 GQARTGTGKTLAF 55 (207)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCCChHHHHH
Confidence 4689999999873
No 112
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=56.33 E-value=2.3 Score=33.30 Aligned_cols=12 Identities=42% Similarity=0.642 Sum_probs=11.2
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|+|||+++
T Consensus 7 ~G~nG~GKTTll 18 (189)
T 2i3b_A 7 TGPPGVGKTTLI 18 (189)
T ss_dssp ESCCSSCHHHHH
T ss_pred ECCCCChHHHHH
Confidence 599999999998
No 113
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=56.32 E-value=2 Score=38.14 Aligned_cols=13 Identities=54% Similarity=0.759 Sum_probs=11.9
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
.+|+||||||.++
T Consensus 58 i~G~tGsGKs~~~ 70 (437)
T 1e9r_A 58 VNGATGTGKSVLL 70 (437)
T ss_dssp EEECTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 5799999999998
No 114
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=56.30 E-value=2.1 Score=33.80 Aligned_cols=12 Identities=67% Similarity=0.703 Sum_probs=10.5
Q ss_pred cccCCccCcccc
Q 024439 2 AYGQTGTGKTYT 13 (267)
Q Consensus 2 ayG~tgSGKT~T 13 (267)
..++||||||.+
T Consensus 56 v~~pTGsGKT~~ 67 (224)
T 1qde_A 56 AQAQSGTGKTGT 67 (224)
T ss_dssp EECCTTSSHHHH
T ss_pred EECCCCCcHHHH
Confidence 468999999988
No 115
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=56.17 E-value=2.5 Score=35.48 Aligned_cols=13 Identities=38% Similarity=0.606 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 43 l~G~~GtGKT~la 55 (324)
T 1hqc_A 43 LFGPPGLGKTTLA 55 (324)
T ss_dssp EECCTTCCCHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999987
No 116
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=56.04 E-value=2.3 Score=33.49 Aligned_cols=12 Identities=50% Similarity=0.636 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|||||+.+
T Consensus 29 ~G~~GsGKTtl~ 40 (235)
T 2w0m_A 29 TGEPGTGKTIFS 40 (235)
T ss_dssp ECSTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 699999999987
No 117
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=55.96 E-value=2.4 Score=36.03 Aligned_cols=13 Identities=62% Similarity=0.943 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+.+
T Consensus 63 l~G~~G~GKT~la 75 (353)
T 1sxj_D 63 FYGPPGTGKTSTI 75 (353)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999988
No 118
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=55.89 E-value=2.4 Score=34.39 Aligned_cols=12 Identities=33% Similarity=0.448 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|+.|||||+.+
T Consensus 31 ~G~~GsGKSTl~ 42 (245)
T 2jeo_A 31 SGGTASGKSTVC 42 (245)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 399999999988
No 119
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=55.84 E-value=2.2 Score=34.25 Aligned_cols=12 Identities=42% Similarity=0.761 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 36 iG~nGsGKSTLl 47 (224)
T 2pcj_A 36 IGASGSGKSTLL 47 (224)
T ss_dssp EECTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999887
No 120
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=55.83 E-value=2.4 Score=36.43 Aligned_cols=12 Identities=50% Similarity=0.756 Sum_probs=11.2
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+++
T Consensus 135 vG~nGaGKTTll 146 (328)
T 3e70_C 135 VGFNGSGKTTTI 146 (328)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999998
No 121
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=55.80 E-value=2.4 Score=36.49 Aligned_cols=13 Identities=62% Similarity=0.866 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 49 i~G~~G~GKTtl~ 61 (389)
T 1fnn_A 49 LLGRPGTGKTVTL 61 (389)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999998
No 122
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=55.31 E-value=2.4 Score=36.69 Aligned_cols=13 Identities=46% Similarity=0.657 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 77 l~Gp~GtGKT~la 89 (376)
T 1um8_A 77 LIGPTGSGKTLMA 89 (376)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999986
No 123
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=55.26 E-value=2.4 Score=35.34 Aligned_cols=12 Identities=33% Similarity=0.634 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 40 iGpnGsGKSTLl 51 (275)
T 3gfo_A 40 LGGNGVGKSTLF 51 (275)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999997
No 124
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=55.21 E-value=2.4 Score=36.57 Aligned_cols=13 Identities=54% Similarity=0.994 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+..
T Consensus 89 L~GppGtGKT~la 101 (355)
T 2qp9_X 89 LYGPPGTGKSYLA 101 (355)
T ss_dssp EECSTTSCHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 4899999999986
No 125
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=55.10 E-value=1.9 Score=36.62 Aligned_cols=13 Identities=31% Similarity=0.414 Sum_probs=11.9
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 51 l~G~pGtGKT~la 63 (331)
T 2r44_A 51 LEGVPGLAKTLSV 63 (331)
T ss_dssp EESCCCHHHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 4899999999988
No 126
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=55.01 E-value=2.5 Score=36.00 Aligned_cols=12 Identities=33% Similarity=0.440 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 96 ~G~sGsGKSTL~ 107 (312)
T 3aez_A 96 AGSVAVGKSTTA 107 (312)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCchHHHHH
Confidence 499999999988
No 127
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=54.94 E-value=2.5 Score=35.08 Aligned_cols=12 Identities=42% Similarity=0.708 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 43 iG~nGsGKSTLl 54 (266)
T 4g1u_C 43 IGPNGAGKSTLL 54 (266)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999987
No 128
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=54.93 E-value=2.7 Score=31.65 Aligned_cols=12 Identities=33% Similarity=0.454 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 10 ~G~~GsGKSTl~ 21 (173)
T 1kag_A 10 VGPMGAGKSTIG 21 (173)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999986
No 129
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=54.72 E-value=2.4 Score=32.89 Aligned_cols=13 Identities=38% Similarity=0.383 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||+.|||||+.+
T Consensus 8 i~G~~gsGKTT~l 20 (184)
T 2orw_A 8 ITGPMYSGKTTEL 20 (184)
T ss_dssp EEESTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3799999999998
No 130
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=54.36 E-value=2.6 Score=35.73 Aligned_cols=13 Identities=38% Similarity=0.411 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 60 l~G~~GtGKT~la 72 (338)
T 3pfi_A 60 FSGPAGLGKTTLA 72 (338)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECcCCCCHHHHH
Confidence 3899999999987
No 131
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=54.16 E-value=2.6 Score=34.35 Aligned_cols=12 Identities=50% Similarity=0.780 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 30 iG~nGsGKSTLl 41 (240)
T 2onk_A 30 LGPTGAGKSVFL 41 (240)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 132
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=54.12 E-value=2.6 Score=36.35 Aligned_cols=13 Identities=46% Similarity=0.687 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 122 l~GppGtGKT~la 134 (357)
T 3d8b_A 122 LFGPPGTGKTLIG 134 (357)
T ss_dssp EESSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999987
No 133
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=54.12 E-value=2.3 Score=39.73 Aligned_cols=13 Identities=54% Similarity=0.687 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|++|||||+++
T Consensus 169 i~G~pGTGKTt~l 181 (608)
T 1w36_D 169 ISGGPGTGKTTTV 181 (608)
T ss_dssp EECCTTSTHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 4699999999987
No 134
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=54.08 E-value=2.6 Score=33.59 Aligned_cols=12 Identities=42% Similarity=0.589 Sum_probs=11.2
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|||||+.+
T Consensus 30 ~G~~GsGKTtl~ 41 (243)
T 1n0w_A 30 FGEFRTGKTQIC 41 (243)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 799999999987
No 135
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=54.06 E-value=2.7 Score=34.99 Aligned_cols=13 Identities=54% Similarity=0.585 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+..
T Consensus 43 l~G~~G~GKt~la 55 (319)
T 2chq_A 43 FSGPPGTGKTATA 55 (319)
T ss_dssp EESSSSSSHHHHH
T ss_pred EECcCCcCHHHHH
Confidence 3899999999987
No 136
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=53.80 E-value=2.6 Score=36.64 Aligned_cols=12 Identities=50% Similarity=0.720 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+++
T Consensus 163 vG~nGsGKTTll 174 (359)
T 2og2_A 163 VGVNGGGKTTSL 174 (359)
T ss_dssp ECCTTSCHHHHH
T ss_pred EcCCCChHHHHH
Confidence 599999999999
No 137
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens}
Probab=53.70 E-value=1.5 Score=34.24 Aligned_cols=13 Identities=38% Similarity=0.360 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 53 i~~~tGsGKT~~~ 65 (216)
T 3b6e_A 53 ICLPTGSGKTRVA 65 (216)
T ss_dssp EECSCHHHHHHHH
T ss_pred EEcCCCCCHHHHH
Confidence 4689999999987
No 138
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=53.69 E-value=2.9 Score=31.62 Aligned_cols=12 Identities=25% Similarity=0.423 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|||||+..
T Consensus 9 ~G~~GsGKST~a 20 (178)
T 1qhx_A 9 NGGSSAGKSGIV 20 (178)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 139
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=53.66 E-value=2.8 Score=36.10 Aligned_cols=13 Identities=46% Similarity=0.639 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 56 l~GppGtGKT~la 68 (363)
T 3hws_A 56 LIGPTGSGKTLLA 68 (363)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999986
No 140
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=53.57 E-value=2.7 Score=32.77 Aligned_cols=12 Identities=33% Similarity=0.545 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+..
T Consensus 31 ~G~sGsGKSTl~ 42 (200)
T 3uie_A 31 TGLSGSGKSTLA 42 (200)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 141
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=53.40 E-value=2.7 Score=31.82 Aligned_cols=12 Identities=42% Similarity=0.551 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 39 ~G~nGaGKTTLl 50 (158)
T 1htw_A 39 NGDLGAGKTTLT 50 (158)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 142
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=53.36 E-value=2.7 Score=35.94 Aligned_cols=12 Identities=33% Similarity=0.415 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||+++
T Consensus 98 ~GpsGSGKSTl~ 109 (321)
T 3tqc_A 98 AGSVAVGKSTTS 109 (321)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 399999999988
No 143
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=53.30 E-value=2.7 Score=33.60 Aligned_cols=12 Identities=50% Similarity=0.661 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 41 iG~NGsGKSTLl 52 (214)
T 1sgw_A 41 HGPNGIGKTTLL 52 (214)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999988
No 144
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=52.96 E-value=2.7 Score=35.91 Aligned_cols=13 Identities=62% Similarity=0.910 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+.+
T Consensus 50 i~G~~G~GKTtl~ 62 (386)
T 2qby_A 50 IYGLTGTGKTAVV 62 (386)
T ss_dssp EEECTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999998
No 145
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=52.74 E-value=3.2 Score=31.04 Aligned_cols=12 Identities=17% Similarity=-0.064 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 7 ~G~~GsGKsT~~ 18 (173)
T 3kb2_A 7 EGPDCCFKSTVA 18 (173)
T ss_dssp ECSSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 146
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=52.66 E-value=2.8 Score=32.27 Aligned_cols=12 Identities=33% Similarity=0.443 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||..+
T Consensus 10 ~G~sGsGKTTl~ 21 (169)
T 1xjc_A 10 VGYKHSGKTTLM 21 (169)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999877
No 147
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=52.61 E-value=2.9 Score=34.00 Aligned_cols=12 Identities=58% Similarity=0.841 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 38 ~G~nGsGKSTLl 49 (240)
T 1ji0_A 38 IGANGAGKTTTL 49 (240)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 148
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=52.61 E-value=2.8 Score=34.56 Aligned_cols=12 Identities=42% Similarity=0.747 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 38 iG~nGsGKSTLl 49 (262)
T 1b0u_A 38 IGSSGSGKSTFL 49 (262)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 149
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=52.52 E-value=2.5 Score=36.86 Aligned_cols=13 Identities=31% Similarity=0.672 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|++|||||+++
T Consensus 40 i~G~~G~GKs~~~ 52 (392)
T 4ag6_A 40 ILAKPGAGKSFTA 52 (392)
T ss_dssp EECCTTSSHHHHH
T ss_pred EEcCCCCCHHHHH
Confidence 4699999999998
No 150
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=52.50 E-value=2.9 Score=34.95 Aligned_cols=13 Identities=38% Similarity=0.473 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||++.
T Consensus 51 l~G~~G~GKT~la 63 (327)
T 1iqp_A 51 FAGPPGVGKTTAA 63 (327)
T ss_dssp EESCTTSSHHHHH
T ss_pred EECcCCCCHHHHH
Confidence 3899999999988
No 151
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=52.40 E-value=2.9 Score=36.72 Aligned_cols=12 Identities=42% Similarity=0.695 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||++|
T Consensus 35 lGpsGsGKSTLL 46 (381)
T 3rlf_A 35 VGPSGCGKSTLL 46 (381)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCchHHHHH
Confidence 599999999997
No 152
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=52.35 E-value=2.9 Score=34.35 Aligned_cols=12 Identities=33% Similarity=0.700 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 39 iG~nGsGKSTLl 50 (257)
T 1g6h_A 39 IGPNGSGKSTLI 50 (257)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 153
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=52.22 E-value=3.2 Score=31.31 Aligned_cols=12 Identities=33% Similarity=0.457 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 8 ~G~~GsGKST~a 19 (181)
T 1ly1_A 8 IGCPGSGKSTWA 19 (181)
T ss_dssp ECCTTSSHHHHH
T ss_pred ecCCCCCHHHHH
Confidence 699999999976
No 154
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=52.18 E-value=2.9 Score=34.14 Aligned_cols=12 Identities=33% Similarity=0.650 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 41 ~G~nGsGKSTLl 52 (247)
T 2ff7_A 41 VGRSGSGKSTLT 52 (247)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 155
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=52.15 E-value=2.9 Score=36.43 Aligned_cols=12 Identities=50% Similarity=0.733 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 36 lGpsGsGKSTLL 47 (359)
T 3fvq_A 36 IGASGCGKTTLL 47 (359)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCchHHHHH
Confidence 599999999997
No 156
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=52.15 E-value=2.9 Score=33.88 Aligned_cols=12 Identities=50% Similarity=0.733 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 37 ~G~nGsGKSTLl 48 (237)
T 2cbz_A 37 VGQVGCGKSSLL 48 (237)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 157
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=51.90 E-value=3 Score=33.96 Aligned_cols=12 Identities=33% Similarity=0.612 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 34 ~G~nGsGKSTLl 45 (243)
T 1mv5_A 34 AGPSGGGKSTIF 45 (243)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 158
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=51.85 E-value=2.1 Score=34.42 Aligned_cols=13 Identities=62% Similarity=0.746 Sum_probs=11.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 72 i~apTGsGKT~~~ 84 (237)
T 3bor_A 72 AQAQSGTGKTATF 84 (237)
T ss_dssp ECCCSSHHHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 5689999999874
No 159
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=51.60 E-value=3 Score=32.70 Aligned_cols=12 Identities=33% Similarity=0.410 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
||+.|||||..+
T Consensus 14 ~G~mgsGKTT~l 25 (191)
T 1xx6_A 14 VGPMYSGKSEEL 25 (191)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 899999999888
No 160
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A
Probab=51.57 E-value=3 Score=39.02 Aligned_cols=12 Identities=58% Similarity=0.708 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+|+
T Consensus 201 ~GppGTGKT~~~ 212 (624)
T 2gk6_A 201 QGPPGTGKTVTS 212 (624)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999997
No 161
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=51.52 E-value=3 Score=31.50 Aligned_cols=12 Identities=33% Similarity=0.623 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 14 ~G~~GsGKSTl~ 25 (175)
T 1knq_A 14 MGVSGSGKSAVA 25 (175)
T ss_dssp ECSTTSCHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 599999999987
No 162
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=51.39 E-value=3 Score=34.58 Aligned_cols=12 Identities=42% Similarity=0.692 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||+.|
T Consensus 8 vG~nGaGKSTLl 19 (270)
T 3sop_A 8 VGQSGLGKSTLV 19 (270)
T ss_dssp EESSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 163
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 2.51A {Homo sapiens}
Probab=51.27 E-value=2.9 Score=35.17 Aligned_cols=13 Identities=54% Similarity=0.695 Sum_probs=11.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 136 ~~a~TGsGKT~a~ 148 (300)
T 3fmo_B 136 AQSQSGTGKTAAF 148 (300)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCccHHH
Confidence 5689999999874
No 164
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=51.11 E-value=3.1 Score=36.15 Aligned_cols=12 Identities=58% Similarity=0.858 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.|
T Consensus 35 lGpnGsGKSTLL 46 (359)
T 2yyz_A 35 LGPSGCGKTTTL 46 (359)
T ss_dssp ECSTTSSHHHHH
T ss_pred EcCCCchHHHHH
Confidence 599999999997
No 165
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=51.06 E-value=3 Score=32.60 Aligned_cols=12 Identities=33% Similarity=0.338 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 28 ~G~~GsGKstl~ 39 (201)
T 1rz3_A 28 DGLSRSGKTTLA 39 (201)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 166
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=51.06 E-value=2.9 Score=33.39 Aligned_cols=13 Identities=38% Similarity=0.662 Sum_probs=10.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 67 i~a~TGsGKT~~~ 79 (236)
T 2pl3_A 67 GAAKTGSGKTLAF 79 (236)
T ss_dssp EECCTTSCHHHHH
T ss_pred EEeCCCCcHHHHH
Confidence 4689999999874
No 167
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=50.99 E-value=3 Score=35.79 Aligned_cols=13 Identities=54% Similarity=0.759 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+.+
T Consensus 50 l~G~~G~GKT~la 62 (384)
T 2qby_B 50 FLGLTGTGKTFVS 62 (384)
T ss_dssp EEECTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999987
No 168
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=50.88 E-value=3.1 Score=32.40 Aligned_cols=12 Identities=42% Similarity=0.642 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 35 ~G~~GsGKSTl~ 46 (200)
T 4eun_A 35 MGVSGSGKTTIA 46 (200)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999887
No 169
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=50.85 E-value=3.3 Score=37.03 Aligned_cols=13 Identities=46% Similarity=0.509 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 68 l~GppGtGKT~la 80 (456)
T 2c9o_A 68 LAGPPGTGKTALA 80 (456)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCcCCHHHHH
Confidence 4899999999886
No 170
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=50.77 E-value=3.2 Score=33.47 Aligned_cols=12 Identities=58% Similarity=0.761 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 40 ~G~nGsGKSTLl 51 (229)
T 2pze_A 40 AGSTGAGKTSLL 51 (229)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 171
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=50.75 E-value=3.2 Score=32.38 Aligned_cols=12 Identities=42% Similarity=0.551 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 8 ~G~~GsGKST~~ 19 (206)
T 1jjv_A 8 TGGIGSGKTTIA 19 (206)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999986
No 172
>3ly5_A ATP-dependent RNA helicase DDX18; alpha-beta, structural genomics, structural genomics consort ATP-binding, hydrolase, nucleotide-binding, RNA-B; 2.80A {Homo sapiens}
Probab=50.57 E-value=3 Score=34.19 Aligned_cols=13 Identities=46% Similarity=0.710 Sum_probs=11.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 96 v~a~TGsGKT~~~ 108 (262)
T 3ly5_A 96 AAAKTGSGKTLAF 108 (262)
T ss_dssp ECCCTTSCHHHHH
T ss_pred EEccCCCCchHHH
Confidence 5689999999874
No 173
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=50.43 E-value=3.2 Score=34.15 Aligned_cols=12 Identities=58% Similarity=0.841 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 47 ~G~NGsGKSTLl 58 (256)
T 1vpl_A 47 IGPNGAGKTTTL 58 (256)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 174
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=50.41 E-value=3.3 Score=37.00 Aligned_cols=13 Identities=46% Similarity=0.925 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 172 L~GppGtGKT~lA 184 (444)
T 2zan_A 172 LFGPPGTGKSYLA 184 (444)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999987
No 175
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=50.30 E-value=3.5 Score=32.53 Aligned_cols=12 Identities=33% Similarity=0.454 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||+..
T Consensus 11 ~G~~GsGKSTl~ 22 (227)
T 1cke_A 11 DGPSGAGKGTLC 22 (227)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999986
No 176
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=50.16 E-value=3.3 Score=34.22 Aligned_cols=12 Identities=50% Similarity=0.772 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 39 iG~nGsGKSTLl 50 (266)
T 2yz2_A 39 AGNTGSGKSTLL 50 (266)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 499999999987
No 177
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=50.07 E-value=3.3 Score=35.94 Aligned_cols=12 Identities=50% Similarity=0.828 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.|
T Consensus 47 lGpnGsGKSTLL 58 (355)
T 1z47_A 47 LGPSGSGKTTIL 58 (355)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999997
No 178
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=50.07 E-value=3.3 Score=36.09 Aligned_cols=13 Identities=38% Similarity=0.695 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 153 L~GppGtGKT~la 165 (389)
T 3vfd_A 153 LFGPPGNGKTMLA 165 (389)
T ss_dssp EESSTTSCHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999987
No 179
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=49.95 E-value=3.2 Score=34.93 Aligned_cols=12 Identities=67% Similarity=1.068 Sum_probs=11.2
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||+++
T Consensus 111 vG~~GsGKTTl~ 122 (296)
T 2px0_A 111 FGSTGAGKTTTL 122 (296)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999999
No 180
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=49.94 E-value=2 Score=33.06 Aligned_cols=12 Identities=33% Similarity=0.570 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||+.+
T Consensus 8 vG~SGsGKSTL~ 19 (171)
T 2f1r_A 8 VGTSDSGKTTLI 19 (171)
T ss_dssp EESCHHHHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999887
No 181
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=49.81 E-value=3.4 Score=34.06 Aligned_cols=12 Identities=42% Similarity=0.692 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 52 ~G~nGsGKSTLl 63 (260)
T 2ghi_A 52 VGHTGSGKSTIA 63 (260)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 182
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=49.75 E-value=3.4 Score=34.21 Aligned_cols=12 Identities=42% Similarity=0.736 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 56 iG~NGsGKSTLl 67 (263)
T 2olj_A 56 IGPSGSGKSTFL 67 (263)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCCcHHHHH
Confidence 599999999987
No 183
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=49.73 E-value=3.4 Score=33.78 Aligned_cols=12 Identities=33% Similarity=0.490 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 35 ~G~nGsGKSTLl 46 (250)
T 2d2e_A 35 MGPNGAGKSTLG 46 (250)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999988
No 184
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=49.72 E-value=3.3 Score=34.98 Aligned_cols=12 Identities=33% Similarity=0.440 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||+.+
T Consensus 86 ~G~~GsGKSTl~ 97 (308)
T 1sq5_A 86 AGSVAVGKSTTA 97 (308)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999988
No 185
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomi consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=49.72 E-value=3.1 Score=32.99 Aligned_cols=13 Identities=54% Similarity=0.708 Sum_probs=10.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 62 ~~apTGsGKT~~~ 74 (228)
T 3iuy_A 62 VVAQTGTGKTLSY 74 (228)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCCChHHHHH
Confidence 4579999999874
No 186
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=49.67 E-value=3.4 Score=34.75 Aligned_cols=13 Identities=38% Similarity=0.368 Sum_probs=11.4
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+++
T Consensus 53 ~~G~~G~GKT~la 65 (324)
T 3u61_B 53 HSPSPGTGKTTVA 65 (324)
T ss_dssp ECSSTTSSHHHHH
T ss_pred eeCcCCCCHHHHH
Confidence 3688999999998
No 187
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=49.64 E-value=3.4 Score=35.98 Aligned_cols=12 Identities=42% Similarity=0.780 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.|
T Consensus 35 lGpnGsGKSTLL 46 (362)
T 2it1_A 35 LGPSGSGKSTLL 46 (362)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCchHHHHH
Confidence 599999999997
No 188
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=49.47 E-value=3.7 Score=32.09 Aligned_cols=12 Identities=33% Similarity=0.620 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+..
T Consensus 18 ~G~sGsGKsTl~ 29 (204)
T 2qor_A 18 CGPSGVGKGTLI 29 (204)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 189
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=49.46 E-value=3.8 Score=31.23 Aligned_cols=12 Identities=42% Similarity=0.470 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+..
T Consensus 11 ~G~~GsGKst~a 22 (185)
T 3trf_A 11 IGLMGAGKTSVG 22 (185)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 190
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=49.34 E-value=3.5 Score=36.04 Aligned_cols=12 Identities=58% Similarity=0.858 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.|
T Consensus 35 lGpnGsGKSTLL 46 (372)
T 1g29_1 35 LGPSGCGKTTTL 46 (372)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCcHHHHHH
Confidence 599999999997
No 191
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=49.32 E-value=3.7 Score=33.51 Aligned_cols=13 Identities=46% Similarity=0.593 Sum_probs=10.9
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|++|||||..-
T Consensus 6 I~G~~GSGKSTla 18 (253)
T 2ze6_A 6 IYGPTCSGKTDMA 18 (253)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCcCHHHHH
Confidence 3699999999865
No 192
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=49.04 E-value=3.6 Score=33.78 Aligned_cols=12 Identities=50% Similarity=0.778 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 37 ~G~nGsGKSTLl 48 (253)
T 2nq2_C 37 LGQNGCGKSTLL 48 (253)
T ss_dssp ECCSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 193
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=48.78 E-value=3.5 Score=31.78 Aligned_cols=12 Identities=50% Similarity=0.537 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||..+
T Consensus 12 ~G~sGsGKTTl~ 23 (174)
T 1np6_A 12 AAWSGTGKTTLL 23 (174)
T ss_dssp ECCTTSCHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 489999999888
No 194
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=48.71 E-value=3.6 Score=32.42 Aligned_cols=12 Identities=50% Similarity=0.814 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|+.|||||..+
T Consensus 29 ~G~NgsGKStil 40 (203)
T 3qks_A 29 IGQNGSGKSSLL 40 (203)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 799999999987
No 195
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=48.70 E-value=3.6 Score=35.98 Aligned_cols=12 Identities=58% Similarity=0.858 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.|
T Consensus 43 lGpnGsGKSTLL 54 (372)
T 1v43_A 43 LGPSGCGKTTTL 54 (372)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCChHHHHH
Confidence 599999999997
No 196
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=48.61 E-value=3.6 Score=32.15 Aligned_cols=12 Identities=42% Similarity=0.617 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|||||..+
T Consensus 26 ~G~~GsGKTtl~ 37 (220)
T 2cvh_A 26 YGPYASGKTTLA 37 (220)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 197
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=48.47 E-value=3.6 Score=33.69 Aligned_cols=12 Identities=42% Similarity=0.697 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 32 iG~NGsGKSTLl 43 (249)
T 2qi9_C 32 VGPNGAGKSTLL 43 (249)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 499999999987
No 198
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=48.45 E-value=3.6 Score=32.50 Aligned_cols=12 Identities=25% Similarity=0.548 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..+
T Consensus 25 ~GPSGaGKsTL~ 36 (197)
T 3ney_A 25 IGASGVGRSHIK 36 (197)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 599999999987
No 199
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=48.18 E-value=3.7 Score=33.12 Aligned_cols=12 Identities=42% Similarity=0.371 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
||+.|+|||..+
T Consensus 18 tG~mGsGKTT~l 29 (223)
T 2b8t_A 18 TGPMFAGKTAEL 29 (223)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 799999999988
No 200
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=48.17 E-value=4 Score=30.97 Aligned_cols=13 Identities=38% Similarity=0.383 Sum_probs=11.4
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|.+|||||+..
T Consensus 16 i~G~~GsGKst~~ 28 (180)
T 3iij_A 16 LTGTPGVGKTTLG 28 (180)
T ss_dssp EECSTTSSHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 3699999999987
No 201
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=47.93 E-value=3.7 Score=33.93 Aligned_cols=12 Identities=50% Similarity=0.780 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 36 ~G~NGsGKSTLl 47 (263)
T 2pjz_A 36 LGPNGSGKTTLL 47 (263)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999988
No 202
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=47.90 E-value=3.7 Score=33.11 Aligned_cols=12 Identities=33% Similarity=0.553 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 33 ~G~~GsGKSTl~ 44 (246)
T 2bbw_A 33 LGPPGSGKGTVC 44 (246)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 203
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- RNA-binding, methylation, mRNA processing, mRNA S nucleus; HET: ADP; 2.60A {Homo sapiens} PDB: 4a4d_A
Probab=47.62 E-value=3.4 Score=33.22 Aligned_cols=13 Identities=46% Similarity=0.693 Sum_probs=10.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 71 ~~apTGsGKT~~~ 83 (242)
T 3fe2_A 71 GVAQTGSGKTLSY 83 (242)
T ss_dssp EEECTTSCHHHHH
T ss_pred EECCCcCHHHHHH
Confidence 4579999999884
No 204
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=47.55 E-value=3.8 Score=33.96 Aligned_cols=12 Identities=33% Similarity=0.614 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 51 ~G~nGsGKSTLl 62 (271)
T 2ixe_A 51 VGPNGSGKSTVA 62 (271)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 205
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural GEN consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=47.38 E-value=3.5 Score=33.04 Aligned_cols=13 Identities=46% Similarity=0.675 Sum_probs=10.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 71 ~~a~TGsGKT~~~ 83 (245)
T 3dkp_A 71 ASAPTGSGKTLAF 83 (245)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 4579999999873
No 206
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=47.32 E-value=3.9 Score=34.14 Aligned_cols=12 Identities=58% Similarity=0.933 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 53 iG~NGsGKSTLl 64 (279)
T 2ihy_A 53 YGLNGAGKTTLL 64 (279)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999987
No 207
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=47.13 E-value=3.9 Score=36.59 Aligned_cols=13 Identities=46% Similarity=0.677 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 55 L~GppGtGKTtlA 67 (447)
T 3pvs_A 55 LWGPPGTGKTTLA 67 (447)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 3899999999987
No 208
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=47.08 E-value=3.9 Score=33.80 Aligned_cols=12 Identities=33% Similarity=0.578 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 52 ~G~NGsGKSTLl 63 (267)
T 2zu0_C 52 MGPNGSGKSTLS 63 (267)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 209
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=47.07 E-value=3.9 Score=34.90 Aligned_cols=13 Identities=38% Similarity=0.447 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+.+
T Consensus 43 l~G~~G~GKT~la 55 (373)
T 1jr3_A 43 FSGTRGVGKTSIA 55 (373)
T ss_dssp EESCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999987
No 210
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=47.03 E-value=4 Score=37.14 Aligned_cols=40 Identities=20% Similarity=0.232 Sum_probs=23.8
Q ss_pred cccCCccCccccc---cc---cC------CC-CCCCcChHHHHHHHHHHhccc
Q 024439 2 AYGQTGTGKTYTL---GR---LG------KD-DASERGIMVRALEDIISSMSV 41 (267)
Q Consensus 2 ayG~tgSGKT~Tl---~G---~~------~~-~~~~~Gli~r~~~~lf~~~~~ 41 (267)
-||++|+|||+.+ .| .+ .. ...-.|....-+..+|+....
T Consensus 69 L~GppGtGKTtLaraIa~~~~~~~i~i~g~~~~~~~~g~~~~~v~~lfq~a~~ 121 (499)
T 2dhr_A 69 LVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFETAKR 121 (499)
T ss_dssp EECSSSSSHHHHHHHHHHHTTCCEEEEEGGGGTSSCTTHHHHHHHHHTTTSSS
T ss_pred EECCCCCCHHHHHHHHHHHhCCCEEEEehhHHHHhhhhhHHHHHHHHHHHHHh
Confidence 3899999999987 11 00 00 011245556667788877543
No 211
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=46.93 E-value=4.3 Score=30.89 Aligned_cols=12 Identities=33% Similarity=0.462 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 9 ~G~~GsGKsT~~ 20 (192)
T 1kht_A 9 TGVPGVGSTTSS 20 (192)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 212
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=46.71 E-value=3.9 Score=35.98 Aligned_cols=12 Identities=50% Similarity=0.855 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||++|
T Consensus 53 lGpsGsGKSTLL 64 (390)
T 3gd7_A 53 LGRTGSGKSTLL 64 (390)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCChHHHHH
Confidence 499999999997
No 213
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=46.55 E-value=4.2 Score=34.52 Aligned_cols=12 Identities=33% Similarity=0.473 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 132 vGpsGsGKSTLl 143 (305)
T 2v9p_A 132 IGPPNTGKSMLC 143 (305)
T ss_dssp ECSSSSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 699999999988
No 214
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=46.54 E-value=4.1 Score=33.91 Aligned_cols=13 Identities=38% Similarity=0.583 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+..
T Consensus 47 l~G~~G~GKt~la 59 (323)
T 1sxj_B 47 ISGMPGIGKTTSV 59 (323)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECcCCCCHHHHH
Confidence 4899999999987
No 215
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=46.49 E-value=4.1 Score=36.97 Aligned_cols=13 Identities=54% Similarity=0.838 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 243 L~GppGtGKT~lA 255 (489)
T 3hu3_A 243 LYGPPGTGKTLIA 255 (489)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECcCCCCHHHHH
Confidence 4899999999987
No 216
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=46.37 E-value=4.1 Score=33.20 Aligned_cols=29 Identities=24% Similarity=0.315 Sum_probs=19.4
Q ss_pred ccCCccCccccc---c---ccCCCCCCCcChHHHHHHH
Q 024439 3 YGQTGTGKTYTL---G---RLGKDDASERGIMVRALED 34 (267)
Q Consensus 3 yG~tgSGKT~Tl---~---G~~~~~~~~~Gli~r~~~~ 34 (267)
-|++|||||+.+ - |. .....|-+.|++..
T Consensus 33 ~G~~GsGKSTl~k~La~~Lg~---~~~d~g~i~r~~~~ 67 (252)
T 4e22_A 33 DGPSGAGKGTLCKALAESLNW---RLLDSGAIYRVLAL 67 (252)
T ss_dssp ECCTTSSHHHHHHHHHHHTTC---EEEEHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHhcCC---CcCCCCceehHhHH
Confidence 399999999886 1 32 12345777777653
No 217
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=46.29 E-value=4.1 Score=36.46 Aligned_cols=13 Identities=38% Similarity=0.465 Sum_probs=11.4
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|+.|||||+++
T Consensus 50 i~G~aGTGKT~ll 62 (459)
T 3upu_A 50 INGPAGTGATTLT 62 (459)
T ss_dssp EECCTTSCHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 3699999999987
No 218
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=46.26 E-value=4.3 Score=34.17 Aligned_cols=13 Identities=38% Similarity=0.606 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 30 i~Ge~GtGKt~lA 42 (304)
T 1ojl_A 30 IHGDSGTGKELVA 42 (304)
T ss_dssp EESCTTSCHHHHH
T ss_pred EECCCCchHHHHH
Confidence 3899999999876
No 219
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=46.00 E-value=3.1 Score=36.00 Aligned_cols=12 Identities=58% Similarity=0.839 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.|
T Consensus 32 lGpnGsGKSTLL 43 (348)
T 3d31_A 32 LGPTGAGKTLFL 43 (348)
T ss_dssp ECCCTHHHHHHH
T ss_pred ECCCCccHHHHH
Confidence 599999999997
No 220
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=45.95 E-value=3.1 Score=33.66 Aligned_cols=12 Identities=42% Similarity=0.725 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||..+
T Consensus 33 ~GpnGsGKSTll 44 (227)
T 1qhl_A 33 SGGNGAGKSTTM 44 (227)
T ss_dssp HSCCSHHHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 221
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, N project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=45.56 E-value=4 Score=32.96 Aligned_cols=13 Identities=54% Similarity=0.728 Sum_probs=10.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 65 ~~a~TGsGKT~~~ 77 (253)
T 1wrb_A 65 ACAQTGSGKTAAF 77 (253)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCChHHHHH
Confidence 4579999999874
No 222
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=45.53 E-value=4.3 Score=34.40 Aligned_cols=12 Identities=50% Similarity=0.667 Sum_probs=11.2
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||+++
T Consensus 110 vG~~GsGKTTl~ 121 (306)
T 1vma_A 110 VGVNGTGKTTSC 121 (306)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCChHHHHH
Confidence 599999999999
No 223
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=45.10 E-value=4.8 Score=31.24 Aligned_cols=12 Identities=33% Similarity=0.542 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 24 ~G~~GsGKSTla 35 (202)
T 3t61_A 24 MGVSGSGKSSVG 35 (202)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 224
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=44.82 E-value=4.5 Score=31.61 Aligned_cols=12 Identities=50% Similarity=0.756 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.||+|+|||..+
T Consensus 7 ~GPSG~GK~Tl~ 18 (186)
T 1ex7_A 7 SGPSGTGKSTLL 18 (186)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999877
No 225
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=44.73 E-value=3.1 Score=32.79 Aligned_cols=13 Identities=54% Similarity=0.621 Sum_probs=10.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 46 v~a~TGsGKT~~~ 58 (219)
T 1q0u_A 46 GQSQTGTGKTHAY 58 (219)
T ss_dssp EECCSSHHHHHHH
T ss_pred EECCCCChHHHHH
Confidence 4689999999873
No 226
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=44.72 E-value=4.5 Score=36.80 Aligned_cols=13 Identities=46% Similarity=0.741 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+++
T Consensus 82 L~GppGtGKTtla 94 (516)
T 1sxj_A 82 LYGPPGIGKTTAA 94 (516)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999987
No 227
>3lfu_A DNA helicase II; SF1 helicase, ATP-binding, DNA damage, DNA REP replication, DNA-binding, hydrolase, nucleotide-B SOS response; HET: DNA; 1.80A {Escherichia coli} PDB: 2is6_A* 2is2_A* 2is1_A* 2is4_A*
Probab=44.68 E-value=4.3 Score=37.74 Aligned_cols=12 Identities=42% Similarity=0.631 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+++
T Consensus 28 ~a~aGsGKT~~l 39 (647)
T 3lfu_A 28 LAGAGSGKTRVL 39 (647)
T ss_dssp EECTTSCHHHHH
T ss_pred EECCCCCHHHHH
Confidence 589999999998
No 228
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=44.66 E-value=4.9 Score=31.23 Aligned_cols=12 Identities=42% Similarity=0.398 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+..
T Consensus 31 ~G~~GsGKsTl~ 42 (199)
T 3vaa_A 31 TGYMGAGKTTLG 42 (199)
T ss_dssp ECCTTSCHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 599999999886
No 229
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=44.63 E-value=4.9 Score=31.69 Aligned_cols=12 Identities=42% Similarity=0.780 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 11 tG~pGsGKT~~a 22 (199)
T 2r2a_A 11 TGTPGSGKTLKM 22 (199)
T ss_dssp ECCTTSSHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 699999999976
No 230
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=44.37 E-value=4.6 Score=35.22 Aligned_cols=12 Identities=33% Similarity=0.703 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 60 iGpnGaGKSTLl 71 (366)
T 3tui_C 60 IGASGAGKSTLI 71 (366)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCchHHHHH
Confidence 599999999886
No 231
>3ber_A Probable ATP-dependent RNA helicase DDX47; DEAD, AMP, structural genomics, structural GEN consortium, SGC, ATP-binding, hydrolase; HET: AMP PGE; 1.40A {Homo sapiens}
Probab=44.32 E-value=4.2 Score=32.95 Aligned_cols=13 Identities=38% Similarity=0.621 Sum_probs=10.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 85 v~a~TGsGKT~~~ 97 (249)
T 3ber_A 85 GLAETGSGKTGAF 97 (249)
T ss_dssp EECCTTSCHHHHH
T ss_pred EEcCCCCCchhHh
Confidence 4579999999874
No 232
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=44.26 E-value=4.6 Score=35.02 Aligned_cols=12 Identities=33% Similarity=0.598 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|||||..+
T Consensus 29 ~G~NGaGKTTll 40 (365)
T 3qf7_A 29 EGPNGAGKSSLF 40 (365)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 233
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=44.02 E-value=4.9 Score=30.64 Aligned_cols=12 Identities=42% Similarity=0.446 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 11 ~G~~GsGKST~~ 22 (193)
T 2rhm_A 11 TGHPATGKTTLS 22 (193)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999976
No 234
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=43.99 E-value=4.5 Score=31.51 Aligned_cols=12 Identities=42% Similarity=0.432 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+..
T Consensus 27 ~G~~GsGKSTl~ 38 (207)
T 2qt1_A 27 SGVTNSGKTTLA 38 (207)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999877
No 235
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=43.91 E-value=4.7 Score=33.82 Aligned_cols=12 Identities=42% Similarity=0.816 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|||||+..
T Consensus 37 ~G~sGsGKSTla 48 (290)
T 1odf_A 37 SGPQGSGKSFTS 48 (290)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 236
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=43.88 E-value=3.1 Score=36.06 Aligned_cols=12 Identities=42% Similarity=0.725 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.|
T Consensus 37 lGpnGsGKSTLL 48 (353)
T 1oxx_K 37 LGPSGAGKTTFM 48 (353)
T ss_dssp ECSCHHHHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999998
No 237
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=43.85 E-value=5.1 Score=30.44 Aligned_cols=12 Identities=33% Similarity=0.537 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 10 ~G~~GsGKST~~ 21 (186)
T 3cm0_A 10 LGPPGAGKGTQA 21 (186)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 238
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19
Probab=43.75 E-value=4.3 Score=32.76 Aligned_cols=13 Identities=38% Similarity=0.335 Sum_probs=11.4
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|++|+|||+..
T Consensus 113 l~~~tG~GKT~~a 125 (237)
T 2fz4_A 113 IVLPTGSGKTHVA 125 (237)
T ss_dssp EEESSSTTHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 4689999999987
No 239
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=43.47 E-value=4.8 Score=36.64 Aligned_cols=12 Identities=50% Similarity=0.745 Sum_probs=11.2
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+++
T Consensus 299 VGpNGSGKTTLl 310 (503)
T 2yhs_A 299 VGVNGVGKTTTI 310 (503)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCcccHHHHH
Confidence 599999999999
No 240
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=43.44 E-value=5.6 Score=33.17 Aligned_cols=13 Identities=46% Similarity=0.493 Sum_probs=11.2
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|++|||||+..
T Consensus 38 l~G~sGsGKSTla 50 (287)
T 1gvn_B 38 LGGQPGSGKTSLR 50 (287)
T ss_dssp EECCTTSCTHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3699999999876
No 241
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=43.33 E-value=4.5 Score=32.17 Aligned_cols=13 Identities=38% Similarity=0.636 Sum_probs=10.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 66 ~~a~TGsGKT~~~ 78 (230)
T 2oxc_A 66 VQAKSGTGKTCVF 78 (230)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 4579999999873
No 242
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=43.32 E-value=4.7 Score=33.83 Aligned_cols=12 Identities=58% Similarity=0.761 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 70 ~G~NGsGKSTLl 81 (290)
T 2bbs_A 70 AGSTGAGKTSLL 81 (290)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 499999999987
No 243
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=43.05 E-value=5.3 Score=33.82 Aligned_cols=12 Identities=50% Similarity=0.587 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|+.|||||+.+
T Consensus 10 ~G~~GaGKTTll 21 (318)
T 1nij_A 10 TGFLGAGKTTLL 21 (318)
T ss_dssp EESSSSSCHHHH
T ss_pred EecCCCCHHHHH
Confidence 499999999987
No 244
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=42.76 E-value=5 Score=36.28 Aligned_cols=13 Identities=46% Similarity=0.593 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 54 L~GppGtGKT~La 66 (476)
T 2ce7_A 54 LVGPPGTGKTLLA 66 (476)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999986
No 245
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=42.75 E-value=3.8 Score=34.74 Aligned_cols=12 Identities=42% Similarity=0.745 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 86 vG~sGsGKSTLl 97 (306)
T 3nh6_A 86 VGPSGAGKSTIL 97 (306)
T ss_dssp ESSSCHHHHHHH
T ss_pred ECCCCchHHHHH
Confidence 499999999987
No 246
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=42.66 E-value=5 Score=38.79 Aligned_cols=12 Identities=58% Similarity=0.708 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+|+
T Consensus 377 ~GppGTGKT~ti 388 (800)
T 2wjy_A 377 QGPPGTGKTVTS 388 (800)
T ss_dssp ECCTTSCHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 699999999997
No 247
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=42.64 E-value=5.5 Score=29.78 Aligned_cols=12 Identities=33% Similarity=0.351 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 8 ~G~~GsGKsT~a 19 (173)
T 1e6c_A 8 VGARGCGMTTVG 19 (173)
T ss_dssp ESCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 248
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=42.22 E-value=5.7 Score=30.42 Aligned_cols=12 Identities=50% Similarity=0.625 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 16 ~G~~GsGKSTv~ 27 (184)
T 1y63_A 16 TGTPGTGKTSMA 27 (184)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 249
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=42.22 E-value=5.7 Score=33.02 Aligned_cols=13 Identities=38% Similarity=0.549 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+..
T Consensus 109 l~GppgtGKt~~a 121 (267)
T 1u0j_A 109 LFGPATTGKTNIA 121 (267)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999987
No 250
>1t6n_A Probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; HET: FLC; 1.94A {Homo sapiens} SCOP: c.37.1.19
Probab=42.07 E-value=4.8 Score=31.59 Aligned_cols=13 Identities=31% Similarity=0.524 Sum_probs=10.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 56 i~~~TGsGKT~~~ 68 (220)
T 1t6n_A 56 CQAKSGMGKTAVF 68 (220)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCCCchhhhh
Confidence 3579999999865
No 251
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=41.87 E-value=5.5 Score=30.25 Aligned_cols=12 Identities=42% Similarity=0.637 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 7 ~G~~GsGKsT~~ 18 (194)
T 1nks_A 7 TGIPGVGKSTVL 18 (194)
T ss_dssp EECTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 252
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=41.70 E-value=5.4 Score=38.59 Aligned_cols=13 Identities=54% Similarity=0.634 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|+.|||||+|+
T Consensus 380 I~GppGTGKT~~i 392 (802)
T 2xzl_A 380 IQGPPGTGKTVTS 392 (802)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3699999999997
No 253
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=41.69 E-value=5.5 Score=34.47 Aligned_cols=12 Identities=42% Similarity=0.592 Sum_probs=11.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
||+.|+|||+.+
T Consensus 58 ~G~~G~GKT~L~ 69 (412)
T 1w5s_A 58 IGRVGIGKTTLA 69 (412)
T ss_dssp TTCCSSSHHHHH
T ss_pred cCcCCCCHHHHH
Confidence 899999999998
No 254
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=41.68 E-value=5.8 Score=30.17 Aligned_cols=12 Identities=33% Similarity=0.506 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 9 ~G~~GsGKsT~a 20 (196)
T 1tev_A 9 LGGPGAGKGTQC 20 (196)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999875
No 255
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=41.67 E-value=5.3 Score=31.89 Aligned_cols=12 Identities=50% Similarity=0.684 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|+.|||||+.+
T Consensus 26 ~G~~GsGKSTl~ 37 (230)
T 2vp4_A 26 EGNIGSGKTTYL 37 (230)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 399999999876
No 256
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=41.32 E-value=5.9 Score=30.44 Aligned_cols=12 Identities=33% Similarity=0.711 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 6 ~G~~GsGKsT~~ 17 (205)
T 2jaq_A 6 FGTVGAGKSTIS 17 (205)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCccCHHHHH
Confidence 599999999876
No 257
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=41.02 E-value=5.8 Score=30.71 Aligned_cols=12 Identities=33% Similarity=0.531 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 7 ~G~~GsGKSTl~ 18 (204)
T 2if2_A 7 TGNIGCGKSTVA 18 (204)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCcCHHHHH
Confidence 599999999876
No 258
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=41.00 E-value=6 Score=29.85 Aligned_cols=12 Identities=33% Similarity=0.493 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 10 ~G~~GsGKsTla 21 (175)
T 1via_A 10 IGFMGSGKSTLA 21 (175)
T ss_dssp ECCTTSCHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 599999999875
No 259
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=40.96 E-value=5 Score=33.85 Aligned_cols=13 Identities=46% Similarity=0.690 Sum_probs=10.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 49 ~~~~TGsGKT~~~ 61 (367)
T 1hv8_A 49 AQARTGSGKTASF 61 (367)
T ss_dssp EECCSSSSHHHHH
T ss_pred EECCCCChHHHHH
Confidence 4589999999874
No 260
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A*
Probab=40.79 E-value=5.6 Score=36.86 Aligned_cols=12 Identities=50% Similarity=0.653 Sum_probs=11.2
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+++
T Consensus 210 ~G~pGTGKTt~i 221 (574)
T 3e1s_A 210 TGGPGTGKSTTT 221 (574)
T ss_dssp ECCTTSCHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 699999999998
No 261
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=40.78 E-value=5.9 Score=30.36 Aligned_cols=12 Identities=33% Similarity=0.512 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 18 ~G~~GsGKsT~a 29 (199)
T 2bwj_A 18 IGGPGSGKGTQC 29 (199)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999875
No 262
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=40.69 E-value=5 Score=32.53 Aligned_cols=13 Identities=38% Similarity=0.649 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|..|+||||++
T Consensus 11 ~~~kgGvGKTt~a 23 (228)
T 2r8r_A 11 LGAAPGVGKTYAM 23 (228)
T ss_dssp EESSTTSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 4689999999997
No 263
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=40.62 E-value=6.6 Score=33.22 Aligned_cols=12 Identities=33% Similarity=0.722 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|||||..|
T Consensus 30 ~G~NGsGKS~ll 41 (322)
T 1e69_A 30 VGPNGSGKSNII 41 (322)
T ss_dssp ECCTTTCSTHHH
T ss_pred ECCCCCcHHHHH
Confidence 799999999988
No 264
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=40.52 E-value=5.5 Score=31.65 Aligned_cols=12 Identities=50% Similarity=0.562 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|||||..+
T Consensus 29 ~G~~GsGKTtl~ 40 (247)
T 2dr3_A 29 SGGPGTGKTIFS 40 (247)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999985
No 265
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=40.43 E-value=5.5 Score=31.45 Aligned_cols=13 Identities=31% Similarity=0.376 Sum_probs=10.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||+-|||||.-|
T Consensus 25 iyG~MgsGKTt~L 37 (195)
T 1w4r_A 25 ILGPMFSGKSTEL 37 (195)
T ss_dssp EEECTTSCHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 4999999999433
No 266
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=40.41 E-value=6.3 Score=30.82 Aligned_cols=12 Identities=33% Similarity=0.493 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 6 ~G~~GsGKsT~a 17 (216)
T 3fb4_A 6 MGLPGAGKGTQA 17 (216)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999875
No 267
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=40.30 E-value=5.8 Score=33.89 Aligned_cols=12 Identities=50% Similarity=0.814 Sum_probs=11.4
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|+.|||||..+
T Consensus 29 ~G~NGsGKS~ll 40 (339)
T 3qkt_A 29 IGQNGSGKSSLL 40 (339)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999998
No 268
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=40.16 E-value=6.3 Score=29.96 Aligned_cols=12 Identities=42% Similarity=0.537 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 6 ~G~~GsGKsT~~ 17 (195)
T 2pbr_A 6 EGIDGSGKTTQA 17 (195)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 269
>2iut_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- cell division, DNA translocation, KOPS, membrane; HET: DNA SAP; 2.25A {Pseudomonas aeruginosa} PDB: 2iuu_A*
Probab=40.15 E-value=5.2 Score=37.08 Aligned_cols=13 Identities=38% Similarity=0.667 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|.||||||+.+
T Consensus 219 IaG~TGSGKS~~L 231 (574)
T 2iut_A 219 VAGTTGSGKSVGV 231 (574)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4799999999987
No 270
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=39.75 E-value=6.1 Score=36.26 Aligned_cols=13 Identities=38% Similarity=0.452 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 113 l~Gp~GtGKTtla 125 (543)
T 3m6a_A 113 LAGPPGVGKTSLA 125 (543)
T ss_dssp EESSSSSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999986
No 271
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=39.67 E-value=6.5 Score=29.25 Aligned_cols=12 Identities=25% Similarity=0.202 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 6 ~G~~GsGKsT~a 17 (168)
T 2pt5_A 6 IGFMCSGKSTVG 17 (168)
T ss_dssp ESCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999875
No 272
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=39.64 E-value=5.8 Score=30.87 Aligned_cols=16 Identities=38% Similarity=0.694 Sum_probs=13.1
Q ss_pred CCCCCCchhhHhhHHhcC
Q 024439 212 HIPTRDSKLTRLLRDSFG 229 (267)
Q Consensus 212 ~ipyr~SkLT~lL~~~l~ 229 (267)
-+|+ .+++|..+|.+|
T Consensus 140 iVP~--~~~~R~frD~~G 155 (180)
T 1c9k_A 140 IVPE--NRLARHFRDIAG 155 (180)
T ss_dssp CCCS--SHHHHHHHHHHH
T ss_pred CCCC--CHHHHHHHHHHH
Confidence 5775 889999999886
No 273
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=39.62 E-value=6.8 Score=29.58 Aligned_cols=12 Identities=50% Similarity=0.578 Sum_probs=6.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 11 ~G~~GsGKST~a 22 (183)
T 2vli_A 11 NGPFGVGKTHTA 22 (183)
T ss_dssp ECCC----CHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 274
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=39.60 E-value=7.3 Score=34.70 Aligned_cols=12 Identities=33% Similarity=0.296 Sum_probs=10.5
Q ss_pred cccCCccCcccc
Q 024439 2 AYGQTGTGKTYT 13 (267)
Q Consensus 2 ayG~tgSGKT~T 13 (267)
..++||||||..
T Consensus 24 v~a~TGsGKT~~ 35 (451)
T 2jlq_A 24 MDLHPGAGKTKR 35 (451)
T ss_dssp ECCCTTSSCCTT
T ss_pred EECCCCCCHhhH
Confidence 468999999997
No 275
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=39.58 E-value=6.3 Score=30.09 Aligned_cols=12 Identities=33% Similarity=0.501 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 15 ~G~~GsGKsT~~ 26 (196)
T 2c95_A 15 VGGPGSGKGTQC 26 (196)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999976
No 276
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=39.57 E-value=6.3 Score=30.31 Aligned_cols=12 Identities=33% Similarity=0.587 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 14 ~G~~GsGKST~~ 25 (203)
T 1uf9_A 14 TGNIGSGKSTVA 25 (203)
T ss_dssp EECTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999876
No 277
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=39.53 E-value=5.8 Score=35.39 Aligned_cols=12 Identities=58% Similarity=0.697 Sum_probs=10.5
Q ss_pred cccCCccCcccc
Q 024439 2 AYGQTGTGKTYT 13 (267)
Q Consensus 2 ayG~tgSGKT~T 13 (267)
..|+||||||..
T Consensus 136 ~~a~TGsGKT~~ 147 (479)
T 3fmp_B 136 AQSQSGTGKTAA 147 (479)
T ss_dssp EECCSSSSHHHH
T ss_pred EEcCCCCchhHH
Confidence 568999999977
No 278
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=39.36 E-value=6.7 Score=29.77 Aligned_cols=12 Identities=33% Similarity=0.459 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.-
T Consensus 8 ~G~~GsGKsT~a 19 (184)
T 2iyv_A 8 VGLPGSGKSTIG 19 (184)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999875
No 279
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=39.28 E-value=6.1 Score=29.92 Aligned_cols=12 Identities=42% Similarity=0.559 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 11 ~G~~GsGKST~~ 22 (179)
T 2pez_A 11 TGLSGAGKTTVS 22 (179)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999877
No 280
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=39.13 E-value=6.8 Score=29.94 Aligned_cols=12 Identities=33% Similarity=0.620 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|..|||||+..
T Consensus 6 ~G~~GsGKsT~~ 17 (197)
T 2z0h_A 6 EGIDGSGKSTQI 17 (197)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999887
No 281
>2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A
Probab=39.07 E-value=7.4 Score=34.46 Aligned_cols=13 Identities=31% Similarity=0.314 Sum_probs=11.2
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||...
T Consensus 7 v~a~TGsGKT~~~ 19 (431)
T 2v6i_A 7 LDLHPGAGKTRRV 19 (431)
T ss_dssp EECCTTSCTTTTH
T ss_pred EEcCCCCCHHHHH
Confidence 4689999999984
No 282
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=39.05 E-value=6.7 Score=31.84 Aligned_cols=12 Identities=50% Similarity=0.609 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 38 ~G~~GsGKSTla 49 (253)
T 2p5t_B 38 GGQSGAGKTTIH 49 (253)
T ss_dssp ESCGGGTTHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999875
No 283
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=39.03 E-value=6.6 Score=29.79 Aligned_cols=12 Identities=33% Similarity=0.531 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 12 ~G~~GsGKsT~~ 23 (194)
T 1qf9_A 12 LGGPGSGKGTQC 23 (194)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999975
No 284
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=38.90 E-value=7.4 Score=32.53 Aligned_cols=11 Identities=27% Similarity=0.598 Sum_probs=7.1
Q ss_pred cCCccCccccc
Q 024439 4 GQTGTGKTYTL 14 (267)
Q Consensus 4 G~tgSGKT~Tl 14 (267)
|++|||||+..
T Consensus 12 G~sGSGKSTva 22 (290)
T 1a7j_A 12 GSSGAGTSTVK 22 (290)
T ss_dssp SCC---CCTHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 285
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=38.70 E-value=6.2 Score=32.49 Aligned_cols=12 Identities=25% Similarity=0.385 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|+.|||||+.+
T Consensus 36 ~G~~GsGKTtl~ 47 (279)
T 1nlf_A 36 VSPGGAGKSMLA 47 (279)
T ss_dssp EESTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 799999999987
No 286
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=38.63 E-value=7 Score=30.59 Aligned_cols=12 Identities=33% Similarity=0.404 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 6 ~G~~GsGKsT~a 17 (216)
T 3dl0_A 6 MGLPGAGKGTQG 17 (216)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 287
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=38.23 E-value=7.1 Score=30.15 Aligned_cols=12 Identities=33% Similarity=0.506 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 21 ~G~~GsGKsT~~ 32 (203)
T 1ukz_A 21 LGGPGAGKGTQC 32 (203)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999875
No 288
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Probab=38.21 E-value=6.3 Score=34.12 Aligned_cols=12 Identities=33% Similarity=0.750 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|+|||..+
T Consensus 31 ~G~NGaGKT~il 42 (371)
T 3auy_A 31 IGENGSGKSSIF 42 (371)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999887
No 289
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=37.73 E-value=6.8 Score=32.88 Aligned_cols=12 Identities=42% Similarity=0.639 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..+
T Consensus 175 ~G~sG~GKSTll 186 (301)
T 1u0l_A 175 AGLSGVGKSSLL 186 (301)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999887
No 290
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=37.67 E-value=5.9 Score=33.79 Aligned_cols=13 Identities=54% Similarity=0.695 Sum_probs=10.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 49 v~a~TGsGKT~~~ 61 (395)
T 3pey_A 49 AQSQSGTGKTAAF 61 (395)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 4579999999864
No 291
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=37.61 E-value=6.9 Score=35.61 Aligned_cols=13 Identities=23% Similarity=0.378 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 46 L~GpPGtGKT~LA 58 (500)
T 3nbx_X 46 LLGPPGIAKSLIA 58 (500)
T ss_dssp EECCSSSSHHHHH
T ss_pred eecCchHHHHHHH
Confidence 4899999999987
No 292
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=37.38 E-value=8.2 Score=34.26 Aligned_cols=13 Identities=31% Similarity=0.299 Sum_probs=11.1
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||...
T Consensus 13 v~a~TGSGKT~~~ 25 (440)
T 1yks_A 13 LDFHPGAGKTRRF 25 (440)
T ss_dssp ECCCTTSSTTTTH
T ss_pred EEcCCCCCHHHHH
Confidence 4689999999984
No 293
>2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A*
Probab=37.31 E-value=6.1 Score=36.09 Aligned_cols=13 Identities=31% Similarity=0.575 Sum_probs=11.3
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|.||||||..+
T Consensus 172 IaG~TGSGKSt~L 184 (512)
T 2ius_A 172 VAGTTGSGASVGV 184 (512)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4699999999976
No 294
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=37.17 E-value=7.5 Score=30.50 Aligned_cols=12 Identities=33% Similarity=0.540 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|+.|||||+..
T Consensus 10 ~G~~GSGKST~~ 21 (218)
T 1vht_A 10 TGGIGSGKSTVA 21 (218)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999876
No 295
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=37.11 E-value=7 Score=33.92 Aligned_cols=12 Identities=58% Similarity=1.038 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|+.|||||..+
T Consensus 32 ~G~nG~GKttll 43 (359)
T 2o5v_A 32 YGENGAGKTNLL 43 (359)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCChhHHH
Confidence 799999999998
No 296
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=37.08 E-value=7.6 Score=30.30 Aligned_cols=12 Identities=42% Similarity=0.628 Sum_probs=10.4
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 18 tG~~GSGKSTva 29 (192)
T 2grj_A 18 TGKIGTGKSTVC 29 (192)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999875
No 297
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=36.85 E-value=7 Score=34.87 Aligned_cols=12 Identities=50% Similarity=0.661 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||+|+
T Consensus 103 vG~~GsGKTTt~ 114 (433)
T 3kl4_A 103 VGVQGSGKTTTA 114 (433)
T ss_dssp CCCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999997
No 298
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=36.55 E-value=8.6 Score=34.34 Aligned_cols=13 Identities=31% Similarity=0.370 Sum_probs=11.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||...
T Consensus 26 v~a~TGsGKT~~~ 38 (459)
T 2z83_A 26 LDLHPGSGKTRKI 38 (459)
T ss_dssp ECCCTTSCTTTTH
T ss_pred EECCCCCCHHHHH
Confidence 4689999999983
No 299
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=36.28 E-value=7.9 Score=29.87 Aligned_cols=12 Identities=33% Similarity=0.509 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 10 ~G~~GsGKsT~~ 21 (213)
T 2plr_A 10 EGIDGSGKSSQA 21 (213)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 599999999987
No 300
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=36.22 E-value=7.8 Score=34.76 Aligned_cols=13 Identities=38% Similarity=0.549 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 206 L~G~pG~GKT~la 218 (468)
T 3pxg_A 206 LIGEPGVGKTAIA 218 (468)
T ss_dssp EESCTTTTTHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999988
No 301
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=36.21 E-value=7.4 Score=32.70 Aligned_cols=12 Identities=42% Similarity=0.697 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..+
T Consensus 171 ~G~sG~GKSTLl 182 (302)
T 2yv5_A 171 AGPSGVGKSSIL 182 (302)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999988
No 302
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=36.20 E-value=7.4 Score=33.11 Aligned_cols=12 Identities=58% Similarity=0.819 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|+|||+++
T Consensus 111 vG~~G~GKTT~~ 122 (320)
T 1zu4_A 111 VGVNGTGKTTSL 122 (320)
T ss_dssp ESSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999998
No 303
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=36.07 E-value=7.7 Score=33.45 Aligned_cols=13 Identities=62% Similarity=0.746 Sum_probs=10.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 82 v~a~TGsGKT~~~ 94 (414)
T 3eiq_A 82 AQAQSGTGKTATF 94 (414)
T ss_dssp ECCCSCSSSHHHH
T ss_pred EECCCCCcccHHH
Confidence 4689999999873
No 304
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=36.01 E-value=8.1 Score=28.82 Aligned_cols=12 Identities=33% Similarity=0.493 Sum_probs=10.4
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+.-
T Consensus 13 ~G~~GsGKSTva 24 (168)
T 1zuh_A 13 IGFMGSGKSSLA 24 (168)
T ss_dssp ESCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 589999999875
No 305
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=35.92 E-value=6.6 Score=32.68 Aligned_cols=13 Identities=38% Similarity=0.554 Sum_probs=10.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 36 v~~~TGsGKT~~~ 48 (337)
T 2z0m_A 36 VRAKTGSGKTAAY 48 (337)
T ss_dssp EECCTTSSHHHHH
T ss_pred EEcCCCCcHHHHH
Confidence 3579999999865
No 306
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=35.91 E-value=7.8 Score=30.67 Aligned_cols=12 Identities=33% Similarity=0.531 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 13 ~G~~GsGKsT~a 24 (227)
T 1zd8_A 13 MGAPGSGKGTVS 24 (227)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 307
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=35.49 E-value=7.1 Score=33.59 Aligned_cols=13 Identities=54% Similarity=0.695 Sum_probs=10.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 69 v~apTGsGKT~~~ 81 (412)
T 3fht_A 69 AQSQSGTGKTAAF 81 (412)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCCchHHHHH
Confidence 4579999999873
No 308
>1rif_A DAR protein, DNA helicase UVSW; bacteriophage, RECG, SF2, DNA binding protein; HET: DNA; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.23
Probab=35.49 E-value=7.6 Score=31.92 Aligned_cols=12 Identities=17% Similarity=0.171 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.++||||||.+.
T Consensus 134 ~~~tGsGKT~~~ 145 (282)
T 1rif_A 134 NLPTSAGRSLIQ 145 (282)
T ss_dssp CCCTTSCHHHHH
T ss_pred EcCCCCCcHHHH
Confidence 589999999987
No 309
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=35.39 E-value=7.5 Score=32.62 Aligned_cols=13 Identities=31% Similarity=0.463 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-+|+.|+|||..+
T Consensus 35 i~G~~G~GKT~L~ 47 (357)
T 2fna_A 35 VLGLRRTGKSSII 47 (357)
T ss_dssp EEESTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999987
No 310
>1uaa_A REP helicase, protein (ATP-dependent DNA helicase REP.); complex (helicase/DNA), DNA unwinding, hydrolase/DNA complex; HET: DNA; 3.00A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19
Probab=35.23 E-value=7.7 Score=36.43 Aligned_cols=12 Identities=33% Similarity=0.598 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||++|
T Consensus 21 ~AgaGSGKT~~l 32 (673)
T 1uaa_A 21 LAGAGSGKTRVI 32 (673)
T ss_dssp CCCTTSCHHHHH
T ss_pred EeCCCCChHHHH
Confidence 588999999998
No 311
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=35.16 E-value=8.5 Score=29.30 Aligned_cols=12 Identities=42% Similarity=0.554 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 19 ~G~~GsGKsT~~ 30 (186)
T 2yvu_A 19 TGLPGSGKTTIA 30 (186)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 599999999977
No 312
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=35.03 E-value=8 Score=34.97 Aligned_cols=12 Identities=50% Similarity=0.645 Sum_probs=10.4
Q ss_pred cccCCccCcccc
Q 024439 2 AYGQTGTGKTYT 13 (267)
Q Consensus 2 ayG~tgSGKT~T 13 (267)
..++||||||.+
T Consensus 163 l~apTGsGKT~~ 174 (508)
T 3fho_A 163 GQSQSGTGKTAA 174 (508)
T ss_dssp EECCSSTTSHHH
T ss_pred EECCCCccHHHH
Confidence 468999999997
No 313
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=34.73 E-value=7.8 Score=33.34 Aligned_cols=12 Identities=42% Similarity=0.761 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|+.|||||..+
T Consensus 137 ~G~~GsGKTTL~ 148 (349)
T 1pzn_A 137 FGEFGSGKTQLA 148 (349)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999887
No 314
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=34.50 E-value=8.8 Score=29.50 Aligned_cols=12 Identities=33% Similarity=0.324 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|..|||||+..
T Consensus 10 ~G~~GsGKsT~~ 21 (204)
T 2v54_A 10 EGLDKSGKTTQC 21 (204)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 499999999886
No 315
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=34.46 E-value=5.2 Score=31.12 Aligned_cols=12 Identities=33% Similarity=0.495 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|..|||||+.+
T Consensus 6 ~G~~GsGKsTl~ 17 (214)
T 1gtv_A 6 EGVDGAGKRTLV 17 (214)
T ss_dssp EEEEEEEHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 499999999877
No 316
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=34.36 E-value=8.8 Score=32.79 Aligned_cols=12 Identities=42% Similarity=0.468 Sum_probs=10.4
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||..-
T Consensus 11 ~GptGsGKTtla 22 (323)
T 3crm_A 11 MGPTAAGKTDLA 22 (323)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999863
No 317
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=34.21 E-value=7.3 Score=33.68 Aligned_cols=13 Identities=54% Similarity=0.728 Sum_probs=10.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 57 v~a~TGsGKT~~~ 69 (417)
T 2i4i_A 57 ACAQTGSGKTAAF 69 (417)
T ss_dssp EECCTTSCHHHHH
T ss_pred EEcCCCCHHHHHH
Confidence 4589999999764
No 318
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=34.16 E-value=7 Score=33.70 Aligned_cols=12 Identities=25% Similarity=0.504 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 176 vG~nGsGKSTLl 187 (365)
T 1lw7_A 176 LGGESSGKSVLV 187 (365)
T ss_dssp ECCTTSHHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999987
No 319
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=34.07 E-value=9.1 Score=32.96 Aligned_cols=12 Identities=42% Similarity=0.446 Sum_probs=10.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||...
T Consensus 13 ~GptgSGKTtla 24 (340)
T 3d3q_A 13 VGPTASGKTELS 24 (340)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCcCcHHHHH
Confidence 499999999865
No 320
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=34.05 E-value=9.1 Score=30.08 Aligned_cols=12 Identities=33% Similarity=0.518 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 10 ~G~~GsGKsT~a 21 (220)
T 1aky_A 10 IGPPGAGKGTQA 21 (220)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999875
No 321
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=33.89 E-value=9.2 Score=29.44 Aligned_cols=12 Identities=25% Similarity=0.426 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|+.|||||+..
T Consensus 8 ~G~~GsGKst~~ 19 (208)
T 3ake_A 8 DGPSASGKSSVA 19 (208)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999885
No 322
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=33.72 E-value=9 Score=29.66 Aligned_cols=12 Identities=25% Similarity=0.282 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 16 ~G~~GsGKST~~ 27 (212)
T 2wwf_A 16 EGLDRSGKSTQS 27 (212)
T ss_dssp EESTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 589999999987
No 323
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=33.62 E-value=9 Score=36.58 Aligned_cols=13 Identities=46% Similarity=0.521 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 526 l~Gp~GtGKT~lA 538 (758)
T 3pxi_A 526 FLGPTGVGKTELA 538 (758)
T ss_dssp EESCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999988
No 324
>3vkw_A Replicase large subunit; alpha/beta domain, helicase, transferase; 1.90A {Tomato mosaic virus}
Probab=33.59 E-value=8.2 Score=34.55 Aligned_cols=13 Identities=38% Similarity=0.552 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|..|||||+.+
T Consensus 166 I~G~aGsGKTt~I 178 (446)
T 3vkw_A 166 VDGVPGCGKTKEI 178 (446)
T ss_dssp EEECTTSCHHHHH
T ss_pred EEcCCCCCHHHHH
Confidence 3799999999999
No 325
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=33.58 E-value=9.1 Score=30.13 Aligned_cols=12 Identities=25% Similarity=0.332 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 11 ~G~~GsGKsT~~ 22 (222)
T 1zak_A 11 SGAPASGKGTQC 22 (222)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999875
No 326
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=33.58 E-value=9.3 Score=29.48 Aligned_cols=12 Identities=33% Similarity=0.537 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 26 ~G~~GsGKST~a 37 (201)
T 2cdn_A 26 LGPPGAGKGTQA 37 (201)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999975
No 327
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=33.54 E-value=9.7 Score=32.52 Aligned_cols=12 Identities=50% Similarity=0.526 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+||||||...
T Consensus 9 ~GptgsGKt~la 20 (322)
T 3exa_A 9 VGPTAVGKTKTS 20 (322)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCcCCHHHHH
Confidence 599999999875
No 328
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=33.45 E-value=9.8 Score=32.73 Aligned_cols=12 Identities=50% Similarity=0.664 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+||||||..-
T Consensus 46 ~GPTgsGKTtLa 57 (339)
T 3a8t_A 46 MGATGTGKSRLS 57 (339)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999865
No 329
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=33.37 E-value=9.4 Score=31.10 Aligned_cols=12 Identities=33% Similarity=0.415 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 10 ~G~pGSGKSTla 21 (260)
T 3a4m_A 10 TGLPGVGKSTFS 21 (260)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 599999999976
No 330
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=33.23 E-value=11 Score=30.00 Aligned_cols=12 Identities=42% Similarity=0.656 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+||||||...
T Consensus 40 ~GpsGsGKStLA 51 (205)
T 2qmh_A 40 TGDSGVGKSETA 51 (205)
T ss_dssp ECCCTTTTHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999776
No 331
>3rc3_A ATP-dependent RNA helicase SUPV3L1, mitochondrial; SUV3, nucleus, hydrolase; HET: ANP; 2.08A {Homo sapiens} PDB: 3rc8_A
Probab=33.20 E-value=8.4 Score=36.46 Aligned_cols=13 Identities=46% Similarity=0.685 Sum_probs=10.9
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||+.+
T Consensus 160 v~apTGSGKT~~a 172 (677)
T 3rc3_A 160 HSGPTNSGKTYHA 172 (677)
T ss_dssp EECCTTSSHHHHH
T ss_pred EEcCCCCCHHHHH
Confidence 5689999999854
No 332
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=33.12 E-value=9.6 Score=30.78 Aligned_cols=12 Identities=33% Similarity=0.448 Sum_probs=10.4
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 28 ~G~~GSGKST~a 39 (252)
T 1uj2_A 28 SGGTASGKSSVC 39 (252)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999865
No 333
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=32.94 E-value=8.6 Score=29.63 Aligned_cols=12 Identities=33% Similarity=0.623 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..+
T Consensus 32 vG~~g~GKSTLl 43 (210)
T 1pui_A 32 AGRSNAGKSSAL 43 (210)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999887
No 334
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=32.71 E-value=8 Score=33.40 Aligned_cols=13 Identities=62% Similarity=0.744 Sum_probs=10.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 79 v~a~TGsGKT~~~ 91 (410)
T 2j0s_A 79 AQSQSGTGKTATF 91 (410)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCchHHH
Confidence 4679999999764
No 335
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=32.63 E-value=8.8 Score=33.06 Aligned_cols=12 Identities=33% Similarity=0.689 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|+.|+|||.+|
T Consensus 77 iG~nGaGKTTLl 88 (347)
T 2obl_A 77 FAGSGVGKSTLL 88 (347)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999997
No 336
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=32.42 E-value=9.3 Score=33.37 Aligned_cols=12 Identities=33% Similarity=0.368 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|+.|||||..+
T Consensus 175 ~G~~GsGKSTl~ 186 (377)
T 1svm_A 175 KGPIDSGKTTLA 186 (377)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 337
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=32.30 E-value=10 Score=30.74 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=18.3
Q ss_pred ccCCccCccccccccC---CCCCCCcChHHHHHHH
Q 024439 3 YGQTGTGKTYTLGRLG---KDDASERGIMVRALED 34 (267)
Q Consensus 3 yG~tgSGKT~Tl~G~~---~~~~~~~Gli~r~~~~ 34 (267)
.|++|||||+..--.. .-..-+.|.+.|.+..
T Consensus 15 ~G~~GsGKsTla~~la~~lg~~~~d~g~~~r~~~~ 49 (233)
T 3r20_A 15 DGPAGTGKSSVSRGLARALGARYLDTGAMYRIATL 49 (233)
T ss_dssp ECCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHhCCCcccCCcHHHHHHH
Confidence 4999999998761100 0112334666666553
No 338
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=32.26 E-value=8.6 Score=33.02 Aligned_cols=13 Identities=46% Similarity=0.639 Sum_probs=10.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 63 i~a~TGsGKT~~~ 75 (400)
T 1s2m_A 63 ARAKNGTGKTAAF 75 (400)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCCcHHHHHH
Confidence 4589999999764
No 339
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=32.13 E-value=9.7 Score=33.07 Aligned_cols=13 Identities=38% Similarity=0.294 Sum_probs=10.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||...
T Consensus 41 v~apTGsGKT~~~ 53 (414)
T 3oiy_A 41 MVAPTGVGKTTFG 53 (414)
T ss_dssp CCSCSSSSHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 4689999999843
No 340
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=32.10 E-value=9.9 Score=29.43 Aligned_cols=12 Identities=25% Similarity=0.260 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 15 ~G~~GsGKsT~~ 26 (215)
T 1nn5_A 15 EGVDRAGKSTQS 26 (215)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999987
No 341
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=32.10 E-value=9.9 Score=29.73 Aligned_cols=12 Identities=25% Similarity=0.263 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 6 ~G~~GsGKsT~a 17 (214)
T 1e4v_A 6 LGAPVAGKGTQA 17 (214)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999875
No 342
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=32.09 E-value=9.4 Score=34.57 Aligned_cols=12 Identities=42% Similarity=0.725 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||..|
T Consensus 35 iG~nGsGKSTLl 46 (483)
T 3euj_A 35 SGGNGAGKSTTM 46 (483)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999987
No 343
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=32.06 E-value=11 Score=32.19 Aligned_cols=12 Identities=42% Similarity=0.509 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+||||||...
T Consensus 16 ~GptgsGKt~la 27 (316)
T 3foz_A 16 MGPTASGKTALA 27 (316)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCccCHHHHH
Confidence 699999999765
No 344
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=31.93 E-value=11 Score=34.96 Aligned_cols=12 Identities=50% Similarity=0.764 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 387 vG~sGsGKSTll 398 (598)
T 3qf4_B 387 VGPTGSGKTTIV 398 (598)
T ss_dssp ECCTTSSTTHHH
T ss_pred ECCCCCcHHHHH
Confidence 499999999987
No 345
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=31.84 E-value=9.6 Score=35.19 Aligned_cols=12 Identities=33% Similarity=0.623 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 373 vG~sGsGKSTll 384 (578)
T 4a82_A 373 VGMSGGGKSTLI 384 (578)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCChHHHHH
Confidence 499999999987
No 346
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=31.72 E-value=9.7 Score=29.21 Aligned_cols=12 Identities=42% Similarity=0.764 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|+|||..+
T Consensus 11 vG~~g~GKSTLl 22 (199)
T 2f9l_A 11 IGDSGVGKSNLL 22 (199)
T ss_dssp ESSTTSSHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 599999999887
No 347
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=31.66 E-value=11 Score=32.39 Aligned_cols=13 Identities=31% Similarity=0.432 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+..
T Consensus 128 I~GpPGsGKTtLA 140 (331)
T 2vhj_A 128 VTGKGNSGKTPLV 140 (331)
T ss_dssp EECSCSSSHHHHH
T ss_pred EEcCCCCCHHHHH
Confidence 3899999999987
No 348
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=31.63 E-value=9.7 Score=36.78 Aligned_cols=13 Identities=54% Similarity=0.838 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+.+
T Consensus 243 L~Gp~GtGKTtLa 255 (806)
T 1ypw_A 243 LYGPPGTGKTLIA 255 (806)
T ss_dssp ECSCTTSSHHHHH
T ss_pred EECcCCCCHHHHH
Confidence 3899999999876
No 349
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=31.58 E-value=11 Score=34.83 Aligned_cols=12 Identities=42% Similarity=0.786 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 376 vG~sGsGKSTLl 387 (595)
T 2yl4_A 376 VGPSGSGKSTVL 387 (595)
T ss_dssp ECCTTSSSTHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 350
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=31.49 E-value=11 Score=30.08 Aligned_cols=12 Identities=33% Similarity=0.537 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 22 ~G~~GsGKsT~a 33 (233)
T 1ak2_A 22 LGPPGAGKGTQA 33 (233)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999875
No 351
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=31.39 E-value=9.2 Score=33.73 Aligned_cols=13 Identities=54% Similarity=0.728 Sum_probs=10.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
+.++||||||.+.
T Consensus 98 ~~a~TGsGKT~a~ 110 (434)
T 2db3_A 98 ACAQTGSGKTAAF 110 (434)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCchHHH
Confidence 5689999999863
No 352
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=31.34 E-value=9.6 Score=31.54 Aligned_cols=12 Identities=25% Similarity=0.390 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..+
T Consensus 41 ~G~~G~GKTTl~ 52 (296)
T 1cr0_A 41 TSGSGMGKSTFV 52 (296)
T ss_dssp EESTTSSHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 699999999987
No 353
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=30.83 E-value=11 Score=35.60 Aligned_cols=13 Identities=31% Similarity=0.483 Sum_probs=11.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||+.+
T Consensus 237 v~ApTGSGKT~a~ 249 (666)
T 3o8b_A 237 LHAPTGSGKSTKV 249 (666)
T ss_dssp EECCTTSCTTTHH
T ss_pred EEeCCchhHHHHH
Confidence 4689999999776
No 354
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=30.77 E-value=11 Score=29.71 Aligned_cols=13 Identities=31% Similarity=0.437 Sum_probs=10.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-+|+.||||++-.
T Consensus 5 l~GpPGsGKgTqa 17 (206)
T 3sr0_A 5 FLGPPGAGKGTQA 17 (206)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3699999998754
No 355
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=30.66 E-value=9.9 Score=29.05 Aligned_cols=12 Identities=42% Similarity=0.764 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|+|||..+
T Consensus 35 vG~~g~GKSTLl 46 (191)
T 1oix_A 35 IGDSGVGKSNLL 46 (191)
T ss_dssp EECTTSSHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 599999999988
No 356
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=30.62 E-value=11 Score=30.32 Aligned_cols=12 Identities=33% Similarity=0.537 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 35 ~G~~GsGKsT~a 46 (243)
T 3tlx_A 35 LGAPGSGKGTQS 46 (243)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999875
No 357
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=30.62 E-value=10 Score=29.58 Aligned_cols=12 Identities=25% Similarity=0.376 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 31 ~G~~GsGKsT~~ 42 (211)
T 1m7g_A 31 TGLSASGKSTLA 42 (211)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999877
No 358
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=30.45 E-value=12 Score=33.19 Aligned_cols=12 Identities=50% Similarity=0.650 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|+|||+++
T Consensus 105 vG~~GvGKTTla 116 (432)
T 2v3c_C 105 VGIQGSGKTTTA 116 (432)
T ss_dssp ECCSSSSTTHHH
T ss_pred ECCCCCCHHHHH
Confidence 589999999998
No 359
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=30.22 E-value=6.2 Score=34.45 Aligned_cols=12 Identities=42% Similarity=0.775 Sum_probs=11.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|||||..|
T Consensus 66 vG~NGaGKStLl 77 (415)
T 4aby_A 66 TGETGAGKSIIV 77 (415)
T ss_dssp EESHHHHHHHHT
T ss_pred ECCCCCCHHHHH
Confidence 699999999998
No 360
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=30.18 E-value=11 Score=29.73 Aligned_cols=12 Identities=33% Similarity=0.625 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 6 ~G~~GsGKsT~a 17 (223)
T 2xb4_A 6 FGPNGSGKGTQG 17 (223)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999875
No 361
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=30.07 E-value=11 Score=35.83 Aligned_cols=13 Identities=46% Similarity=0.496 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 493 l~G~~GtGKT~la 505 (758)
T 1r6b_X 493 FAGPTGVGKTEVT 505 (758)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 3799999999988
No 362
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=29.96 E-value=11 Score=32.30 Aligned_cols=12 Identities=42% Similarity=0.684 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..+
T Consensus 61 ~G~~GaGKSTLl 72 (337)
T 2qm8_A 61 TGVPGVGKSTTI 72 (337)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999988
No 363
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=29.91 E-value=10 Score=33.51 Aligned_cols=12 Identities=42% Similarity=0.750 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..|
T Consensus 75 vG~nGaGKSTLl 86 (413)
T 1tq4_A 75 TGETGSGKSSFI 86 (413)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 499999999997
No 364
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=29.71 E-value=11 Score=31.53 Aligned_cols=13 Identities=31% Similarity=0.370 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-+|+.|+|||..+
T Consensus 36 i~G~~G~GKT~Ll 48 (350)
T 2qen_A 36 LLGIRRVGKSSLL 48 (350)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCcCCHHHHH
Confidence 4899999999987
No 365
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=29.56 E-value=12 Score=30.92 Aligned_cols=12 Identities=33% Similarity=0.457 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 8 ~G~~GsGKST~a 19 (301)
T 1ltq_A 8 IGCPGSGKSTWA 19 (301)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999865
No 366
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=29.55 E-value=11 Score=33.71 Aligned_cols=12 Identities=50% Similarity=0.733 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|+|||+|+
T Consensus 106 vG~~G~GKTTt~ 117 (443)
T 3dm5_A 106 VGIQGSGKTTTV 117 (443)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 589999999998
No 367
>1pjr_A PCRA; DNA repair, DNA replication, SOS response, helicase, ATP- binding, DNA-binding; 2.50A {Geobacillus stearothermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1qhg_A* 3pjr_A* 2pjr_A* 1qhh_B* 1qhh_D* 1qhh_A* 1qhh_C* 2pjr_B*
Probab=29.46 E-value=11 Score=35.93 Aligned_cols=12 Identities=42% Similarity=0.625 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||++|
T Consensus 30 ~AgAGSGKT~vL 41 (724)
T 1pjr_A 30 MAGAGSGKTRVL 41 (724)
T ss_dssp EECTTSCHHHHH
T ss_pred EEcCCCCHHHHH
Confidence 588999999998
No 368
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=29.32 E-value=11 Score=34.74 Aligned_cols=12 Identities=33% Similarity=0.673 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 375 vG~sGsGKSTll 386 (582)
T 3b5x_A 375 VGRSGSGKSTIA 386 (582)
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 369
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=29.08 E-value=11 Score=32.18 Aligned_cols=13 Identities=46% Similarity=0.572 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|||||..+
T Consensus 127 I~G~~GsGKTtla 139 (343)
T 1v5w_A 127 AFGEFRTGKTQLS 139 (343)
T ss_dssp EECCTTCTHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999987
No 370
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=29.00 E-value=11 Score=34.79 Aligned_cols=12 Identities=33% Similarity=0.673 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 375 vG~sGsGKSTLl 386 (582)
T 3b60_A 375 VGRSGSGKSTIA 386 (582)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 371
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=28.90 E-value=11 Score=28.38 Aligned_cols=13 Identities=38% Similarity=0.473 Sum_probs=11.3
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|.+|+|||..+
T Consensus 53 vvG~~g~GKSsll 65 (193)
T 2ged_A 53 IAGPQNSGKTSLL 65 (193)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3699999999887
No 372
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=28.85 E-value=12 Score=35.29 Aligned_cols=12 Identities=33% Similarity=0.631 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 354 iGpnGsGKSTLl 365 (670)
T 3ux8_A 354 TGVSGSGKSTLV 365 (670)
T ss_dssp ECSTTSSHHHHH
T ss_pred EeeCCCCHHHHH
Confidence 599999999997
No 373
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=28.83 E-value=11 Score=27.22 Aligned_cols=13 Identities=31% Similarity=0.447 Sum_probs=11.3
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|..|+|||..+
T Consensus 8 v~G~~~~GKssl~ 20 (166)
T 2ce2_X 8 VVGAGGVGKSALT 20 (166)
T ss_dssp EEESTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3699999999887
No 374
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=28.76 E-value=12 Score=30.95 Aligned_cols=12 Identities=33% Similarity=0.573 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 81 ~G~~GSGKSTva 92 (281)
T 2f6r_A 81 TGISGSGKSSVA 92 (281)
T ss_dssp EECTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999876
No 375
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=28.60 E-value=12 Score=34.64 Aligned_cols=12 Identities=42% Similarity=0.828 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 375 vG~sGsGKSTll 386 (587)
T 3qf4_A 375 LGETGSGKSTLM 386 (587)
T ss_dssp ECSSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999987
No 376
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=28.52 E-value=11 Score=33.05 Aligned_cols=12 Identities=33% Similarity=0.542 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|||||..+
T Consensus 184 ~G~sGsGKTTLl 195 (400)
T 3lda_A 184 FGEFRTGKSQLC 195 (400)
T ss_dssp EESTTSSHHHHH
T ss_pred EcCCCCChHHHH
Confidence 799999999887
No 377
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=28.37 E-value=12 Score=27.12 Aligned_cols=13 Identities=23% Similarity=0.432 Sum_probs=11.3
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|++|+|||..+
T Consensus 6 v~G~~~~GKSsli 18 (161)
T 2dyk_A 6 IVGRPNVGKSSLF 18 (161)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3699999999887
No 378
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=28.34 E-value=13 Score=36.03 Aligned_cols=13 Identities=46% Similarity=0.521 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||+..
T Consensus 593 l~Gp~GtGKT~lA 605 (854)
T 1qvr_A 593 FLGPTGVGKTELA 605 (854)
T ss_dssp EBSCSSSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999987
No 379
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=28.32 E-value=13 Score=33.27 Aligned_cols=13 Identities=46% Similarity=0.562 Sum_probs=11.4
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 55 l~GppGtGKT~la 67 (444)
T 1g41_A 55 MIGPTGVGKTEIA 67 (444)
T ss_dssp EECCTTSSHHHHH
T ss_pred EEcCCCCCHHHHH
Confidence 4899999999875
No 380
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=28.31 E-value=12 Score=34.93 Aligned_cols=12 Identities=42% Similarity=0.722 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.|
T Consensus 109 vGpNGaGKSTLL 120 (608)
T 3j16_B 109 VGTNGIGKSTAL 120 (608)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCChHHHHH
Confidence 499999999997
No 381
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=28.31 E-value=12 Score=34.34 Aligned_cols=12 Identities=50% Similarity=0.822 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.|
T Consensus 31 iGpNGaGKSTLl 42 (538)
T 3ozx_A 31 LGKNGVGKTTVL 42 (538)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999998
No 382
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=28.31 E-value=12 Score=33.68 Aligned_cols=12 Identities=42% Similarity=0.404 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||..+
T Consensus 144 vGpnGsGKSTLl 155 (460)
T 2npi_A 144 VGGSQTGKTSLS 155 (460)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 383
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=28.29 E-value=12 Score=31.71 Aligned_cols=13 Identities=38% Similarity=0.636 Sum_probs=11.4
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|||||..+
T Consensus 112 i~G~~GsGKT~la 124 (324)
T 2z43_A 112 FFGEFGSGKTQLC 124 (324)
T ss_dssp EEESTTSSHHHHH
T ss_pred EECCCCCCHhHHH
Confidence 3899999999877
No 384
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=28.20 E-value=12 Score=35.64 Aligned_cols=41 Identities=20% Similarity=0.324 Sum_probs=26.3
Q ss_pred cccCCccCcccccccc--------------CC-------C----CCCCcChHHHHHHHHHHhcccC
Q 024439 2 AYGQTGTGKTYTLGRL--------------GK-------D----DASERGIMVRALEDIISSMSVT 42 (267)
Q Consensus 2 ayG~tgSGKT~Tl~G~--------------~~-------~----~~~~~Gli~r~~~~lf~~~~~~ 42 (267)
-||++|+|||+.+.+. +. + .....|-+...++.+|..+...
T Consensus 212 L~G~~GtGKT~la~~la~~l~~~~v~~~~~~~~~~~~~~~~l~~~~~~~g~~e~~l~~~~~~~~~~ 277 (758)
T 1r6b_X 212 LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD 277 (758)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---CCCCCSSCHHHHHHHHHHHHSSS
T ss_pred EEcCCCCCHHHHHHHHHHHHHhCCCChhhcCCEEEEEcHHHHhccccccchHHHHHHHHHHHHHhc
Confidence 3899999999987321 00 0 0223566777788888776553
No 385
>2oca_A DAR protein, ATP-dependent DNA helicase UVSW; ATP-dependant helicase, T4-bacteriophage, recombination, hydrolase; 2.70A {Enterobacteria phage T4}
Probab=27.79 E-value=11 Score=33.66 Aligned_cols=13 Identities=15% Similarity=0.128 Sum_probs=11.4
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||.+.
T Consensus 133 l~~~tGsGKT~~~ 145 (510)
T 2oca_A 133 LNLPTSAGRSLIQ 145 (510)
T ss_dssp EECCSTTTHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 4689999999986
No 386
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=27.79 E-value=12 Score=29.97 Aligned_cols=13 Identities=31% Similarity=0.493 Sum_probs=10.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-+|+.||||++-.
T Consensus 34 llGpPGsGKgTqa 46 (217)
T 3umf_A 34 VLGGPGSGKGTQC 46 (217)
T ss_dssp EECCTTCCHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3799999998754
No 387
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=27.78 E-value=13 Score=31.23 Aligned_cols=13 Identities=38% Similarity=0.496 Sum_probs=11.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|||||..+
T Consensus 103 i~G~~gsGKT~la 115 (322)
T 2i1q_A 103 FAGVFGSGKTQIM 115 (322)
T ss_dssp EEESTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999877
No 388
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein; HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19 c.37.1.19 PDB: 2fzl_A*
Probab=27.67 E-value=12 Score=33.26 Aligned_cols=13 Identities=38% Similarity=0.335 Sum_probs=11.2
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 113 l~~~TGsGKT~~~ 125 (472)
T 2fwr_A 113 IVLPTGSGKTHVA 125 (472)
T ss_dssp EECCTTSCHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 4689999999986
No 389
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=27.64 E-value=12 Score=32.33 Aligned_cols=12 Identities=50% Similarity=0.758 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..+
T Consensus 221 vG~sG~GKSTLl 232 (358)
T 2rcn_A 221 AGQSGVGKSSLL 232 (358)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCccHHHHH
Confidence 599999999887
No 390
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=27.52 E-value=13 Score=29.14 Aligned_cols=12 Identities=33% Similarity=0.534 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|||||+..
T Consensus 11 ~G~~GsGKsT~a 22 (217)
T 3be4_A 11 IGAPGSGKGTQC 22 (217)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999875
No 391
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=27.50 E-value=13 Score=31.47 Aligned_cols=13 Identities=15% Similarity=0.230 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||.+.
T Consensus 29 ~~G~~G~GKt~~a 41 (334)
T 1a5t_A 29 IQALPGMGDDALI 41 (334)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCCchHHHHH
Confidence 3899999999986
No 392
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=27.48 E-value=14 Score=32.90 Aligned_cols=12 Identities=42% Similarity=0.720 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||+.|
T Consensus 48 vG~nGaGKSTLl 59 (427)
T 2qag_B 48 VGETGLGKSTLM 59 (427)
T ss_dssp ECSTTSSSHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 393
>2xau_A PRE-mRNA-splicing factor ATP-dependent RNA helica; hydrolase, ribosome biogenesis, ATPase, ATP-binding, OB-fold; HET: ADP; 1.90A {Saccharomyces cerevisiae} PDB: 3kx2_B*
Probab=27.43 E-value=11 Score=36.16 Aligned_cols=13 Identities=46% Similarity=0.736 Sum_probs=10.9
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||..+
T Consensus 114 i~gpTGSGKTtll 126 (773)
T 2xau_A 114 FVGETGSGKTTQI 126 (773)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4699999999954
No 394
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=27.34 E-value=9.1 Score=32.65 Aligned_cols=12 Identities=67% Similarity=0.703 Sum_probs=10.3
Q ss_pred cccCCccCcccc
Q 024439 2 AYGQTGTGKTYT 13 (267)
Q Consensus 2 ayG~tgSGKT~T 13 (267)
..++||||||.+
T Consensus 63 v~~~TGsGKT~~ 74 (394)
T 1fuu_A 63 AQAQSGTGKTGT 74 (394)
T ss_dssp ECCCSSHHHHHH
T ss_pred EECCCCChHHHH
Confidence 457999999987
No 395
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=27.31 E-value=12 Score=32.10 Aligned_cols=13 Identities=38% Similarity=0.626 Sum_probs=11.4
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|||||+.+
T Consensus 66 I~G~pGsGKTtLa 78 (349)
T 2zr9_A 66 IYGPESSGKTTVA 78 (349)
T ss_dssp EEESTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999886
No 396
>3h1t_A Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Probab=27.18 E-value=11 Score=34.63 Aligned_cols=12 Identities=50% Similarity=0.445 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.++||||||.++
T Consensus 204 ~~~TGsGKT~~~ 215 (590)
T 3h1t_A 204 TMATGTGKTVVA 215 (590)
T ss_dssp EECTTSCHHHHH
T ss_pred EecCCCChHHHH
Confidence 479999999997
No 397
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=27.11 E-value=12 Score=34.02 Aligned_cols=12 Identities=58% Similarity=0.894 Sum_probs=10.3
Q ss_pred cccCCccCcccc
Q 024439 2 AYGQTGTGKTYT 13 (267)
Q Consensus 2 ayG~tgSGKT~T 13 (267)
..++||||||.+
T Consensus 116 v~apTGsGKTl~ 127 (563)
T 3i5x_A 116 ARAKTGTGKTFA 127 (563)
T ss_dssp EECCTTSCHHHH
T ss_pred EECCCCCCccHH
Confidence 467999999986
No 398
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=27.09 E-value=13 Score=34.65 Aligned_cols=12 Identities=33% Similarity=0.614 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||..+
T Consensus 51 vG~nGsGKSTLL 62 (608)
T 3szr_A 51 IGDQSSGKSSVL 62 (608)
T ss_dssp CCCTTSCHHHHH
T ss_pred ECCCCChHHHHH
Confidence 599999999997
No 399
>1w36_B RECB, exodeoxyribonuclease V beta chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 c.52.1.24 PDB: 3k70_B*
Probab=27.08 E-value=13 Score=37.65 Aligned_cols=10 Identities=60% Similarity=1.085 Sum_probs=9.0
Q ss_pred CCccCccccc
Q 024439 5 QTGTGKTYTL 14 (267)
Q Consensus 5 ~tgSGKT~Tl 14 (267)
..||||||||
T Consensus 24 sAGSGKT~~L 33 (1180)
T 1w36_B 24 SAGTGKTFTI 33 (1180)
T ss_dssp CTTSCHHHHH
T ss_pred CCCCCHHHHH
Confidence 5799999998
No 400
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=27.07 E-value=16 Score=30.67 Aligned_cols=12 Identities=58% Similarity=0.689 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|+|||+++
T Consensus 104 ~G~~G~GKTT~~ 115 (297)
T 1j8m_F 104 VGVQGTGKTTTA 115 (297)
T ss_dssp ECSSCSSTTHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999998
No 401
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=26.94 E-value=14 Score=35.78 Aligned_cols=13 Identities=46% Similarity=0.715 Sum_probs=11.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||++|+|||+..
T Consensus 516 L~GppGtGKT~La 528 (806)
T 1ypw_A 516 FYGPPGCGKTLLA 528 (806)
T ss_dssp CBCCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999986
No 402
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=26.93 E-value=14 Score=28.75 Aligned_cols=12 Identities=25% Similarity=0.335 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|++|+|||.+.
T Consensus 22 ~G~SGaGKStla 33 (181)
T 3tqf_A 22 TGEANIGKSELS 33 (181)
T ss_dssp EESSSSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 489999999877
No 403
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=26.88 E-value=13 Score=34.46 Aligned_cols=13 Identities=38% Similarity=0.539 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-+|++|+|||+.+
T Consensus 65 l~Gp~GtGKTtla 77 (604)
T 3k1j_A 65 LIGEPGTGKSMLG 77 (604)
T ss_dssp EECCTTSSHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 3799999999987
No 404
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=26.57 E-value=13 Score=32.16 Aligned_cols=12 Identities=42% Similarity=0.670 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
||+.|||||+.+
T Consensus 67 ~GppGsGKSTLa 78 (356)
T 3hr8_A 67 FGQESSGKTTLA 78 (356)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999876
No 405
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=26.52 E-value=14 Score=32.64 Aligned_cols=12 Identities=33% Similarity=0.733 Sum_probs=11.1
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|+.|||||..+
T Consensus 32 ~G~nG~GKstll 43 (430)
T 1w1w_A 32 IGPNGSGKSNMM 43 (430)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999987
No 406
>2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A
Probab=26.42 E-value=16 Score=34.06 Aligned_cols=13 Identities=31% Similarity=0.345 Sum_probs=11.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||...
T Consensus 191 v~a~TGSGKT~~~ 203 (618)
T 2whx_A 191 MDLHPGAGKTKRI 203 (618)
T ss_dssp ECCCTTSSTTTTH
T ss_pred EEcCCCCCHHHHH
Confidence 4689999999984
No 407
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=26.26 E-value=14 Score=33.91 Aligned_cols=12 Identities=42% Similarity=0.742 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.|
T Consensus 53 vG~NGaGKSTLl 64 (538)
T 1yqt_A 53 VGPNGTGKSTAV 64 (538)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 408
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=26.24 E-value=13 Score=33.06 Aligned_cols=12 Identities=33% Similarity=0.711 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|++|+|||..+
T Consensus 163 vG~sGsGKSTLl 174 (438)
T 2dpy_A 163 FAGSGVGKSVLL 174 (438)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999987
No 409
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=25.94 E-value=14 Score=30.15 Aligned_cols=12 Identities=42% Similarity=0.501 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+..
T Consensus 54 ~G~~GsGKSTl~ 65 (250)
T 3nwj_A 54 VGMMGSGKTTVG 65 (250)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999986
No 410
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=25.66 E-value=14 Score=28.80 Aligned_cols=12 Identities=42% Similarity=0.764 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 36 ~G~~g~GKTTl~ 47 (221)
T 2wsm_A 36 MGAIGSGKTLLI 47 (221)
T ss_dssp EECTTSCHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 489999999877
No 411
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=25.55 E-value=14 Score=28.52 Aligned_cols=13 Identities=38% Similarity=0.473 Sum_probs=11.4
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|++|+|||..+
T Consensus 17 ~~G~~g~GKTsl~ 29 (218)
T 1nrj_B 17 IAGPQNSGKTSLL 29 (218)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3699999999887
No 412
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=25.54 E-value=14 Score=31.50 Aligned_cols=13 Identities=31% Similarity=0.524 Sum_probs=10.5
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 50 v~a~TGsGKT~~~ 62 (391)
T 1xti_A 50 CQAKSGMGKTAVF 62 (391)
T ss_dssp EECSSCSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 3579999999864
No 413
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=25.42 E-value=15 Score=27.16 Aligned_cols=12 Identities=25% Similarity=0.498 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 9 vG~~gvGKStL~ 20 (165)
T 2wji_A 9 IGNPNVGKSTIF 20 (165)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999887
No 414
>2va8_A SSO2462, SKI2-type helicase; hydrolase, DNA repair, ATP-bindin nucleotide-binding; 2.30A {Sulfolobus solfataricus}
Probab=25.39 E-value=13 Score=35.11 Aligned_cols=13 Identities=38% Similarity=0.468 Sum_probs=11.2
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||...
T Consensus 51 v~apTGsGKT~~~ 63 (715)
T 2va8_A 51 LTSPTGSGKTLIA 63 (715)
T ss_dssp EECCTTSCHHHHH
T ss_pred EEcCCCCcHHHHH
Confidence 4689999999886
No 415
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=25.23 E-value=15 Score=26.75 Aligned_cols=12 Identities=25% Similarity=0.479 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 11 ~G~~~~GKssl~ 22 (168)
T 1z2a_A 11 VGNGAVGKSSMI 22 (168)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 699999999887
No 416
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=25.23 E-value=15 Score=31.56 Aligned_cols=12 Identities=33% Similarity=0.606 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..+
T Consensus 80 vG~pgaGKSTLl 91 (349)
T 2www_A 80 SGPPGAGKSTFI 91 (349)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 499999999998
No 417
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=25.10 E-value=13 Score=31.17 Aligned_cols=12 Identities=33% Similarity=0.692 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..|
T Consensus 24 vG~nG~GKSTLl 35 (301)
T 2qnr_A 24 VGESGLGKSTLI 35 (301)
T ss_dssp EEETTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 418
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=25.03 E-value=15 Score=33.48 Aligned_cols=12 Identities=50% Similarity=0.648 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||..+
T Consensus 45 ~G~nGsGKSTL~ 56 (525)
T 1tf7_A 45 SGTSGTGKTLFS 56 (525)
T ss_dssp EESTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 699999999986
No 419
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=24.88 E-value=15 Score=34.50 Aligned_cols=12 Identities=33% Similarity=0.545 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||+.+
T Consensus 50 iGpNGaGKSTLl 61 (670)
T 3ux8_A 50 TGLSGSGKSSLA 61 (670)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHh
Confidence 499999999995
No 420
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=24.76 E-value=16 Score=34.82 Aligned_cols=13 Identities=38% Similarity=0.549 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
=||++|+|||...
T Consensus 206 L~G~pGtGKT~la 218 (758)
T 3pxi_A 206 LIGEPGVGKTAIA 218 (758)
T ss_dssp EESCTTTTTHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3899999999987
No 421
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=24.74 E-value=17 Score=32.13 Aligned_cols=12 Identities=42% Similarity=0.548 Sum_probs=10.3
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+||||||...
T Consensus 8 ~GptgsGKttla 19 (409)
T 3eph_A 8 AGTTGVGKSQLS 19 (409)
T ss_dssp EECSSSSHHHHH
T ss_pred ECcchhhHHHHH
Confidence 599999999764
No 422
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=24.64 E-value=15 Score=35.69 Aligned_cols=13 Identities=38% Similarity=0.626 Sum_probs=11.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|+|||+.+
T Consensus 196 L~G~pG~GKT~la 208 (854)
T 1qvr_A 196 LIGEPGVGKTAIV 208 (854)
T ss_dssp EEECTTSCHHHHH
T ss_pred EEcCCCCCHHHHH
Confidence 3899999999987
No 423
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=24.39 E-value=16 Score=32.42 Aligned_cols=12 Identities=33% Similarity=0.692 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..|
T Consensus 37 vG~sGaGKSTLl 48 (418)
T 2qag_C 37 VGESGLGKSTLI 48 (418)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999987
No 424
>3u4q_A ATP-dependent helicase/nuclease subunit A; helicase, nuclease, double strand DNA repair, protein-DNA CO hydrolase-DNA complex; HET: DNA; 2.80A {Bacillus subtilis} PDB: 3u44_A*
Probab=24.06 E-value=15 Score=37.22 Aligned_cols=11 Identities=45% Similarity=0.700 Sum_probs=5.9
Q ss_pred cCCccCccccc
Q 024439 4 GQTGTGKTYTL 14 (267)
Q Consensus 4 G~tgSGKT~Tl 14 (267)
|..|||||++|
T Consensus 30 a~AGSGKT~vl 40 (1232)
T 3u4q_A 30 AAAGSGKTAVL 40 (1232)
T ss_dssp ECTTCCHHHHH
T ss_pred ecCCCcHHHHH
Confidence 44555555554
No 425
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=23.95 E-value=18 Score=28.51 Aligned_cols=13 Identities=54% Similarity=0.542 Sum_probs=10.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-+|.+|+|||.-+
T Consensus 35 i~G~pG~GKT~l~ 47 (251)
T 2zts_A 35 LTGGTGTGKTTFA 47 (251)
T ss_dssp EECCTTSSHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 3799999999664
No 426
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=23.93 E-value=16 Score=29.00 Aligned_cols=12 Identities=50% Similarity=0.664 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 35 vG~~g~GKStli 46 (239)
T 3lxx_A 35 VGKTGAGKSATG 46 (239)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999887
No 427
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=23.87 E-value=16 Score=34.02 Aligned_cols=12 Identities=50% Similarity=0.769 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+.+
T Consensus 123 iG~NGsGKSTLl 134 (607)
T 3bk7_A 123 VGPNGTGKTTAV 134 (607)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCChHHHHH
Confidence 599999999987
No 428
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=23.73 E-value=16 Score=30.51 Aligned_cols=12 Identities=50% Similarity=0.659 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|+|||+++
T Consensus 104 ~g~~G~GKTT~~ 115 (295)
T 1ls1_A 104 VGLQGSGKTTTA 115 (295)
T ss_dssp ECCTTTTHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 389999999998
No 429
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=23.68 E-value=16 Score=27.27 Aligned_cols=12 Identities=25% Similarity=0.498 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 13 vG~~gvGKStL~ 24 (188)
T 2wjg_A 13 IGNPNVGKSTIF 24 (188)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999887
No 430
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=23.65 E-value=16 Score=26.48 Aligned_cols=12 Identities=25% Similarity=0.556 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 9 ~G~~~~GKssli 20 (170)
T 1ek0_A 9 LGEAAVGKSSIV 20 (170)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999987
No 431
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=23.59 E-value=16 Score=29.12 Aligned_cols=12 Identities=42% Similarity=0.692 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
-|+.|||||+.+
T Consensus 32 ~G~~GsGKsT~~ 43 (229)
T 4eaq_A 32 EGPEGSGKTTVI 43 (229)
T ss_dssp ECCTTSCHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 499999999877
No 432
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=23.36 E-value=17 Score=26.86 Aligned_cols=12 Identities=42% Similarity=0.764 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 14 ~G~~~~GKSsli 25 (182)
T 1ky3_A 14 LGDSGVGKTSLM 25 (182)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999877
No 433
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=23.17 E-value=16 Score=29.37 Aligned_cols=12 Identities=50% Similarity=0.664 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||.++
T Consensus 28 vG~~g~GKStl~ 39 (260)
T 2xtp_A 28 VGKTGTGKSAAG 39 (260)
T ss_dssp EECTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999997
No 434
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=23.11 E-value=17 Score=26.27 Aligned_cols=12 Identities=33% Similarity=0.493 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 10 ~G~~~~GKssl~ 21 (168)
T 1u8z_A 10 VGSGGVGKSALT 21 (168)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999887
No 435
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=23.10 E-value=9.1 Score=32.41 Aligned_cols=12 Identities=50% Similarity=0.758 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|+|||..+
T Consensus 179 vG~sG~GKSTLl 190 (307)
T 1t9h_A 179 AGQSGVGKSSLL 190 (307)
T ss_dssp EESHHHHHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999887
No 436
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=23.02 E-value=19 Score=28.05 Aligned_cols=12 Identities=25% Similarity=0.360 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||+..
T Consensus 9 ~G~~gsGkst~~ 20 (219)
T 2h92_A 9 DGPAAAGKSTIA 20 (219)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 589999999985
No 437
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=22.94 E-value=16 Score=27.48 Aligned_cols=12 Identities=25% Similarity=0.495 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 29 ~G~~~~GKSsli 40 (195)
T 1svi_A 29 AGRSNVGKSSFI 40 (195)
T ss_dssp EEBTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999887
No 438
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=22.90 E-value=18 Score=34.88 Aligned_cols=43 Identities=21% Similarity=0.128 Sum_probs=26.7
Q ss_pred cccCCccCccccc------cccCC-------CCCCCcChHHHHHHHHHHhcccCCC
Q 024439 2 AYGQTGTGKTYTL------GRLGK-------DDASERGIMVRALEDIISSMSVTSD 44 (267)
Q Consensus 2 ayG~tgSGKT~Tl------~G~~~-------~~~~~~Gli~r~~~~lf~~~~~~~~ 44 (267)
-||+.|+|||... .|... -.....|--.+.++++|........
T Consensus 243 L~GPPGTGKT~LAraiA~elg~~~~~v~~~~l~sk~~gese~~lr~lF~~A~~~~P 298 (806)
T 3cf2_A 243 LYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298 (806)
T ss_dssp EECCTTSCHHHHHHHHHTTTTCEEEEEEHHHHHSSCTTHHHHHHHHHHHHHTTSCS
T ss_pred EECCCCCCHHHHHHHHHHHhCCeEEEEEhHHhhcccchHHHHHHHHHHHHHHHcCC
Confidence 4999999999875 11000 0122346667788888887655433
No 439
>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*
Probab=22.81 E-value=15 Score=34.70 Aligned_cols=13 Identities=31% Similarity=0.197 Sum_probs=10.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||...
T Consensus 44 v~apTGsGKT~~~ 56 (720)
T 2zj8_A 44 ISIPTASGKTLIA 56 (720)
T ss_dssp EECCGGGCHHHHH
T ss_pred EEcCCccHHHHHH
Confidence 4689999999765
No 440
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=22.71 E-value=17 Score=26.38 Aligned_cols=12 Identities=42% Similarity=0.783 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 12 ~G~~~~GKSsli 23 (170)
T 1z0j_A 12 LGDTGVGKSSIM 23 (170)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 699999999877
No 441
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=22.53 E-value=18 Score=33.17 Aligned_cols=12 Identities=42% Similarity=0.553 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|++|||||..+
T Consensus 300 ~G~nGsGKSTLl 311 (538)
T 3ozx_A 300 LGPNGIGKTTFA 311 (538)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 442
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=22.51 E-value=17 Score=27.26 Aligned_cols=12 Identities=33% Similarity=0.584 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 29 ~G~~~~GKSsli 40 (195)
T 3pqc_A 29 VGRSNVGKSSLL 40 (195)
T ss_dssp EEBTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999887
No 443
>2olr_A Phosphoenolpyruvate carboxykinase; carbon dioxide, lyase; HET: ATP; 1.60A {Escherichia coli K12} SCOP: c.91.1.1 c.109.1.1 PDB: 1k3c_A* 1k3d_A* 1aq2_A* 2olq_A* 1os1_A* 2pxz_X* 1ayl_A* 2py7_X* 1oen_A 1ylh_A* 1ygg_A*
Probab=22.39 E-value=19 Score=32.97 Aligned_cols=13 Identities=46% Similarity=0.652 Sum_probs=10.9
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||.+|+|||.+.
T Consensus 246 ffGlSGtGKTTLs 258 (540)
T 2olr_A 246 FFGLSGTGKTTLS 258 (540)
T ss_dssp EECSTTSSHHHHH
T ss_pred EEccCCCCHHHHh
Confidence 3799999999864
No 444
>3tbk_A RIG-I helicase domain; DECH helicase, ATP binding, hydrolase; HET: ANP; 2.14A {Mus musculus}
Probab=22.33 E-value=17 Score=32.58 Aligned_cols=13 Identities=38% Similarity=0.588 Sum_probs=10.7
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 24 ~~~~tGsGKT~~~ 36 (555)
T 3tbk_A 24 ICAPTGCGKTFVS 36 (555)
T ss_dssp EECCTTSCHHHHH
T ss_pred EEeCCCChHHHHH
Confidence 4579999999874
No 445
>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A*
Probab=22.29 E-value=15 Score=31.71 Aligned_cols=13 Identities=31% Similarity=0.411 Sum_probs=11.1
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|+.|||||+.+
T Consensus 38 llG~~~SGKST~~ 50 (362)
T 1zcb_A 38 LLGAGESGKSTFL 50 (362)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCcHHHHH
Confidence 4699999999975
No 446
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=22.22 E-value=19 Score=34.76 Aligned_cols=56 Identities=18% Similarity=0.231 Sum_probs=32.5
Q ss_pred cccCCccCccccc------cccCCC-------CCCCcChHHHHHHHHHHhcccCCCeEEEEEEEEecCceeecCC
Q 024439 2 AYGQTGTGKTYTL------GRLGKD-------DASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLA 63 (267)
Q Consensus 2 ayG~tgSGKT~Tl------~G~~~~-------~~~~~Gli~r~~~~lf~~~~~~~~~v~~S~~EIy~e~v~DLL~ 63 (267)
-||+.|+|||... .|..+- -..-.|--.+.++++|.........| ||-|++--|+.
T Consensus 516 l~GPPGtGKT~lAkaiA~e~~~~f~~v~~~~l~s~~vGese~~vr~lF~~Ar~~~P~I------ifiDEiDsl~~ 584 (806)
T 3cf2_A 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV------LFFDELDSIAK 584 (806)
T ss_dssp EESSTTSSHHHHHHHHHHTTTCEEEECCHHHHHTTTCSSCHHHHHHHHHHHHTTCSEE------EECSCGGGCC-
T ss_pred EecCCCCCchHHHHHHHHHhCCceEEeccchhhccccchHHHHHHHHHHHHHHcCCce------eechhhhHHhh
Confidence 4999999999875 111000 01112344678999999876654432 55566555544
No 447
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=22.16 E-value=18 Score=26.35 Aligned_cols=12 Identities=42% Similarity=0.789 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 9 ~G~~~~GKssli 20 (170)
T 1g16_A 9 IGDSGVGKSCLL 20 (170)
T ss_dssp EESTTSSHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 699999999877
No 448
>3u4q_B ATP-dependent helicase/deoxyribonuclease subunit; helicase, nuclease, double strand DNA repair, protein-DNA CO hydrolase-DNA complex; HET: DNA; 2.80A {Bacillus subtilis} PDB: 3u44_B*
Probab=22.00 E-value=16 Score=36.76 Aligned_cols=13 Identities=38% Similarity=0.695 Sum_probs=11.6
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|..|||||++|
T Consensus 6 V~agAGSGKT~~l 18 (1166)
T 3u4q_B 6 LVGRSGSGKTKLI 18 (1166)
T ss_dssp EEECTTSSHHHHH
T ss_pred EEeCCCCChHHHH
Confidence 4689999999998
No 449
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=21.89 E-value=19 Score=26.03 Aligned_cols=12 Identities=33% Similarity=0.523 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 9 ~G~~~~GKSsli 20 (167)
T 1kao_A 9 LGSGGVGKSALT 20 (167)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 450
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=21.84 E-value=19 Score=26.23 Aligned_cols=12 Identities=33% Similarity=0.747 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 9 ~G~~~~GKssli 20 (172)
T 2erx_A 9 FGAGGVGKSSLV 20 (172)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999887
No 451
>4a2p_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.00A {Anas platyrhynchos} PDB: 4a36_A*
Probab=21.65 E-value=18 Score=32.52 Aligned_cols=13 Identities=38% Similarity=0.639 Sum_probs=10.8
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||||||.+.
T Consensus 27 ~~~~tGsGKT~~~ 39 (556)
T 4a2p_A 27 ICAPTGSGKTFVS 39 (556)
T ss_dssp EECCTTSCHHHHH
T ss_pred EEcCCCChHHHHH
Confidence 4679999999874
No 452
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=21.54 E-value=19 Score=26.05 Aligned_cols=12 Identities=33% Similarity=0.523 Sum_probs=10.6
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 9 ~G~~~~GKssli 20 (167)
T 1c1y_A 9 LGSGGVGKSALT 20 (167)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 453
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=21.49 E-value=19 Score=26.08 Aligned_cols=12 Identities=25% Similarity=0.562 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 12 ~G~~~~GKssli 23 (170)
T 1r2q_A 12 LGESAVGKSSLV 23 (170)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999887
No 454
>1ii2_A Phosphoenolpyruvate carboxykinase; phosphate binding loop, lyase; 2.00A {Trypanosoma cruzi} SCOP: c.91.1.1 c.109.1.1
Probab=21.47 E-value=20 Score=32.71 Aligned_cols=13 Identities=46% Similarity=0.652 Sum_probs=11.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-+|.+|+|||.+.
T Consensus 218 ffGlSGtGKTTLs 230 (524)
T 1ii2_A 218 FFGLSGTGKTTLS 230 (524)
T ss_dssp EECCTTSSHHHHH
T ss_pred EEccCCcchhhhh
Confidence 3799999999774
No 455
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=21.46 E-value=19 Score=26.54 Aligned_cols=12 Identities=42% Similarity=0.570 Sum_probs=11.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 14 ~G~~~~GKssl~ 25 (178)
T 2lkc_A 14 MGHVDHGKTTLL 25 (178)
T ss_dssp ESCTTTTHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999887
No 456
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=21.45 E-value=21 Score=28.28 Aligned_cols=12 Identities=25% Similarity=0.399 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|||||...
T Consensus 22 ~G~~gsGKst~~ 33 (236)
T 1q3t_A 22 DGPASSGKSTVA 33 (236)
T ss_dssp ECSSCSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999875
No 457
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=21.30 E-value=19 Score=26.43 Aligned_cols=12 Identities=33% Similarity=0.664 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 13 ~G~~~~GKSsli 24 (177)
T 1wms_A 13 LGDGGVGKSSLM 24 (177)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999887
No 458
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=21.26 E-value=17 Score=31.54 Aligned_cols=13 Identities=38% Similarity=0.304 Sum_probs=11.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..++||+|||.+.
T Consensus 28 l~~~tG~GKT~~~ 40 (494)
T 1wp9_A 28 IVLPTGLGKTLIA 40 (494)
T ss_dssp EECCTTSCHHHHH
T ss_pred EEcCCCCCHHHHH
Confidence 3579999999986
No 459
>1ytm_A Phosphoenolpyruvate carboxykinase [ATP], phosphoenolpyruvate; domain closure, nucleotide binding; HET: ATP; 2.20A {Anaerobiospirillum succiniciproducens} PDB: 1yvy_A
Probab=21.08 E-value=21 Score=32.68 Aligned_cols=12 Identities=50% Similarity=0.769 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
+|.+|+|||.+.
T Consensus 241 fGlSGtGKTTLs 252 (532)
T 1ytm_A 241 FGLSGTGKTTLS 252 (532)
T ss_dssp ECCTTSSHHHHH
T ss_pred EecCCCCHHHHh
Confidence 799999999854
No 460
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=21.04 E-value=20 Score=26.14 Aligned_cols=12 Identities=33% Similarity=0.448 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|.+|+|||..+
T Consensus 12 ~G~~~~GKssli 23 (170)
T 1z08_A 12 LGEGCVGKTSLV 23 (170)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 699999999887
No 461
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=21.03 E-value=21 Score=30.51 Aligned_cols=13 Identities=15% Similarity=-0.089 Sum_probs=11.3
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-||+.|||||..+
T Consensus 33 I~G~pGsGKTtL~ 45 (333)
T 3io5_A 33 LAGPSKSFKSNFG 45 (333)
T ss_dssp EEESSSSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4899999999876
No 462
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=20.87 E-value=19 Score=33.02 Aligned_cols=12 Identities=58% Similarity=0.894 Sum_probs=10.1
Q ss_pred cccCCccCcccc
Q 024439 2 AYGQTGTGKTYT 13 (267)
Q Consensus 2 ayG~tgSGKT~T 13 (267)
..++||||||.+
T Consensus 65 v~apTGsGKTl~ 76 (579)
T 3sqw_A 65 ARAKTGTGKTFA 76 (579)
T ss_dssp EECCTTSCHHHH
T ss_pred EEcCCCcHHHHH
Confidence 457999999986
No 463
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=20.84 E-value=19 Score=26.45 Aligned_cols=12 Identities=33% Similarity=0.459 Sum_probs=10.7
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 15 ~G~~~~GKssli 26 (181)
T 2fn4_A 15 VGGGGVGKSALT 26 (181)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999877
No 464
>1gm5_A RECG; helicase, replication restart; HET: DNA ADP; 3.24A {Thermotoga maritima} SCOP: a.24.21.1 b.40.4.9 c.37.1.19 c.37.1.19
Probab=20.68 E-value=19 Score=34.58 Aligned_cols=13 Identities=38% Similarity=0.583 Sum_probs=11.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||...
T Consensus 394 l~a~TGSGKTlva 406 (780)
T 1gm5_A 394 LQGDVGSGKTVVA 406 (780)
T ss_dssp EECCSSSSHHHHH
T ss_pred EEcCCCCCHHHHH
Confidence 4689999999875
No 465
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=20.66 E-value=20 Score=31.74 Aligned_cols=12 Identities=50% Similarity=0.659 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|+.|+|||+++
T Consensus 104 ~G~~GsGKTT~~ 115 (425)
T 2ffh_A 104 VGLQGSGKTTTA 115 (425)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 399999999997
No 466
>1eaq_A RUNT-related transcription factor 1; transcription/DNA, acute myeloid leukemia, AML, RUNX1, RUNT domain, chloride binding, IG fold; HET: MSE; 1.25A {Mus musculus} SCOP: b.2.5.6 PDB: 1ean_A 1eao_A* 2j6w_A 1e50_A 1h9d_A* 1ljm_A 1cmo_A 1hjc_A* 1hjb_C* 1io4_C 1co1_A
Probab=20.49 E-value=31 Score=24.94 Aligned_cols=12 Identities=50% Similarity=1.049 Sum_probs=10.0
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|-+|-|||||+
T Consensus 92 vgRSGRGKsFtl 103 (140)
T 1eaq_A 92 VGRSGRGKSFTL 103 (140)
T ss_dssp CSCCCTTCCBEE
T ss_pred cccCCCCccEEE
Confidence 377889999988
No 467
>2wv9_A Flavivirin protease NS2B regulatory subunit, FLAV protease NS3 catalytic subunit; nucleotide-binding, capsid protein; 2.75A {Murray valley encephalitis virus}
Probab=20.44 E-value=24 Score=33.24 Aligned_cols=13 Identities=31% Similarity=0.340 Sum_probs=11.0
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
..|+||||||...
T Consensus 246 v~apTGSGKTl~~ 258 (673)
T 2wv9_A 246 LDLHPGAGKTRRI 258 (673)
T ss_dssp ECCCTTTTTTTTH
T ss_pred EEeCCCCCHHHHH
Confidence 4689999999983
No 468
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=20.26 E-value=21 Score=27.83 Aligned_cols=12 Identities=42% Similarity=0.764 Sum_probs=10.5
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 44 vG~~gvGKTtl~ 55 (226)
T 2hf9_A 44 MGAIGSGKTLLI 55 (226)
T ss_dssp EESTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 489999999877
No 469
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=20.16 E-value=21 Score=26.23 Aligned_cols=12 Identities=33% Similarity=0.573 Sum_probs=10.9
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 20 ~G~~~~GKssli 31 (179)
T 2y8e_A 20 LGEQSVGKTSLI 31 (179)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999987
No 470
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=20.15 E-value=20 Score=31.45 Aligned_cols=13 Identities=38% Similarity=0.580 Sum_probs=11.1
Q ss_pred cccCCccCccccc
Q 024439 2 AYGQTGTGKTYTL 14 (267)
Q Consensus 2 ayG~tgSGKT~Tl 14 (267)
-.|..|||||+..
T Consensus 263 l~G~pGSGKSTla 275 (416)
T 3zvl_A 263 AVGFPGAGKSTFI 275 (416)
T ss_dssp EESCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3699999999876
No 471
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=20.00 E-value=19 Score=26.78 Aligned_cols=12 Identities=50% Similarity=0.722 Sum_probs=10.8
Q ss_pred ccCCccCccccc
Q 024439 3 YGQTGTGKTYTL 14 (267)
Q Consensus 3 yG~tgSGKT~Tl 14 (267)
.|..|+|||..+
T Consensus 24 ~G~~~~GKssli 35 (183)
T 1moz_A 24 LGLDGAGKTTIL 35 (183)
T ss_dssp EEETTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999887
Done!