Your job contains 1 sequence.
>024440
MACPSLLHSSASSFHGRFPALSSSSYVRPTYPNPINVNGVVSVKAAAGGIVLVEKSEAEK
TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALI
TGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPN
SFDGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFREG
GGPANLIRKKKLKAHHFDSKSKGKSRR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024440
(267 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2124978 - symbol:AT4G01310 species:3702 "Arabi... 1001 6.2e-101 1
UNIPROTKB|Q3A9S8 - symbol:rplE "50S ribosomal protein L5"... 541 3.5e-52 1
TIGR_CMR|CHY_2297 - symbol:CHY_2297 "ribosomal protein L5... 541 3.5e-52 1
TIGR_CMR|BA_0122 - symbol:BA_0122 "ribosomal protein L5" ... 534 1.9e-51 1
TIGR_CMR|GSU_2845 - symbol:GSU_2845 "ribosomal protein L5... 531 4.0e-51 1
UNIPROTKB|Q9KNZ6 - symbol:rplE "50S ribosomal protein L5"... 517 1.2e-49 1
TIGR_CMR|VC_2584 - symbol:VC_2584 "ribosomal protein L5" ... 517 1.2e-49 1
TIGR_CMR|CPS_0613 - symbol:CPS_0613 "ribosomal protein L5... 501 6.0e-48 1
TIGR_CMR|DET_0486 - symbol:DET_0486 "ribosomal protein L5... 501 6.0e-48 1
UNIPROTKB|P62403 - symbol:rplE "50S ribosomal protein L5"... 498 1.2e-47 1
UNIPROTKB|P62399 - symbol:rplE "50S ribosomal subunit pro... 488 1.4e-46 1
TIGR_CMR|SO_0243 - symbol:SO_0243 "ribosomal protein L5" ... 488 1.4e-46 1
TIGR_CMR|CBU_0250 - symbol:CBU_0250 "ribosomal protein L5... 476 2.7e-45 1
TIGR_CMR|SPO_0497 - symbol:SPO_0497 "ribosomal protein L5... 458 2.2e-43 1
TIGR_CMR|CJE_1863 - symbol:CJE_1863 "ribosomal protein L5... 444 6.6e-42 1
TIGR_CMR|APH_0292 - symbol:APH_0292 "ribosomal protein L5... 423 1.1e-39 1
TIGR_CMR|ECH_0421 - symbol:ECH_0421 "ribosomal protein L5... 418 3.7e-39 1
TIGR_CMR|NSE_0278 - symbol:NSE_0278 "ribosomal protein L5... 351 4.7e-32 1
SGD|S000002645 - symbol:MRPL7 "Mitochondrial ribosomal pr... 220 3.6e-18 1
POMBASE|SPBC2F12.02c - symbol:mrpl7 "mitochondrial riboso... 218 5.8e-18 1
ASPGD|ASPL0000041817 - symbol:AN2268 species:162425 "Emer... 217 1.3e-17 1
CGD|CAL0006187 - symbol:orf19.2214 species:5476 "Candida ... 187 1.4e-13 1
SGD|S000006306 - symbol:RPL11A "Ribosomal 60S subunit pro... 151 1.4e-10 1
SGD|S000003317 - symbol:RPL11B "Ribosomal 60S subunit pro... 151 1.4e-10 1
WB|WBGene00004423 - symbol:rpl-11.2 species:6239 "Caenorh... 148 3.0e-10 1
ASPGD|ASPL0000072443 - symbol:AN4475 species:162425 "Emer... 143 1.1e-09 1
DICTYBASE|DDB_G0279189 - symbol:rpl11 "S60 ribosomal prot... 144 5.2e-09 1
UNIPROTKB|Q90YV7 - symbol:rpl11 "60S ribosomal protein L1... 131 2.6e-08 1
UNIPROTKB|E1C3K3 - symbol:RPL11 "Uncharacterized protein"... 130 3.3e-08 1
UNIPROTKB|F1NYL7 - symbol:RPL11 "Uncharacterized protein"... 130 3.3e-08 1
UNIPROTKB|Q3T087 - symbol:RPL11 "60S ribosomal protein L1... 130 3.3e-08 1
UNIPROTKB|E2R9G7 - symbol:RPL11 "Uncharacterized protein"... 130 3.3e-08 1
UNIPROTKB|P62913 - symbol:RPL11 "60S ribosomal protein L1... 130 3.3e-08 1
UNIPROTKB|Q5VVC8 - symbol:RPL11 "60S ribosomal protein L1... 130 3.3e-08 1
UNIPROTKB|Q5VVC9 - symbol:RPL11 "60S ribosomal protein L1... 130 3.3e-08 1
UNIPROTKB|I3LD74 - symbol:RPL11 "60S ribosomal protein L1... 130 3.3e-08 1
UNIPROTKB|Q29205 - symbol:RPL11 "60S ribosomal protein L1... 130 3.3e-08 1
UNIPROTKB|Q5RC11 - symbol:RPL11 "60S ribosomal protein L1... 130 3.3e-08 1
UNIPROTKB|Q6QMZ8 - symbol:RPL11 "60S ribosomal protein L1... 130 3.3e-08 1
MGI|MGI:1914275 - symbol:Rpl11 "ribosomal protein L11" sp... 130 3.3e-08 1
POMBASE|SPAC26A3.07c - symbol:rpl1101 "60S ribosomal prot... 130 3.3e-08 1
POMBASE|SPBC17G9.10 - symbol:rpl1102 "60S ribosomal prote... 130 3.3e-08 1
RGD|1308681 - symbol:Rpl11 "ribosomal protein L11" specie... 130 3.3e-08 1
UNIPROTKB|F2Z3S4 - symbol:Rpl11 "60S ribosomal protein L1... 130 3.3e-08 1
ZFIN|ZDB-GENE-040625-147 - symbol:rpl11 "ribosomal protei... 130 3.3e-08 1
WB|WBGene00004422 - symbol:rpl-11.1 species:6239 "Caenorh... 135 1.2e-07 1
FB|FBgn0013325 - symbol:RpL11 "Ribosomal protein L11" spe... 127 8.0e-07 1
GENEDB_PFALCIPARUM|PF07_0079 - symbol:PF07_0079 "60S ribo... 121 2.7e-06 1
UNIPROTKB|Q8IBQ6 - symbol:PF07_0079 "60S ribosomal protei... 121 2.7e-06 1
TAIR|locus:2052432 - symbol:RPL16A "ribosomal protein lar... 122 4.2e-06 1
TAIR|locus:2099024 - symbol:AT3G58700 species:3702 "Arabi... 122 4.2e-06 1
TAIR|locus:2124112 - symbol:RPL16B "ribosomal protein L16... 122 4.2e-06 1
TAIR|locus:505006673 - symbol:AT5G45775 species:3702 "Ara... 122 4.2e-06 1
UNIPROTKB|F1M7C1 - symbol:F1M7C1 "Uncharacterized protein... 96 0.00020 1
>TAIR|locus:2124978 [details] [associations]
symbol:AT4G01310 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PROSITE:PS00358
GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0009941 GO:GO:0003735 GO:GO:0022626
GO:GO:0019843 EMBL:AL161491 UniGene:At.20244 EMBL:AF007269
EMBL:AY056194 EMBL:AY114008 EMBL:AY086243 IPI:IPI00521413
PIR:T01713 RefSeq:NP_192040.1 ProteinModelPortal:O04603 SMR:O04603
IntAct:O04603 STRING:O04603 PaxDb:O04603 PRIDE:O04603 ProMEX:O04603
EnsemblPlants:AT4G01310.1 GeneID:827947 KEGG:ath:AT4G01310
GeneFarm:66 TAIR:At4g01310 eggNOG:COG0094 HOGENOM:HOG000231311
InParanoid:O04603 KO:K02931 OMA:FGMPFAR PhylomeDB:O04603
ProtClustDB:CLSN2685489 Genevestigator:O04603 GermOnline:AT4G01310
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 Uniprot:O04603
Length = 262
Score = 1001 (357.4 bits), Expect = 6.2e-101, P = 6.2e-101
Identities = 197/266 (74%), Positives = 228/266 (85%)
Query: 1 MACPSLLHSSASSFHGRFPALSSSSYVRPTYPNPINVNGVVSVKAAAGGIVLVEKSEAEK 60
MA PSLL SSASSFHGRF L++ S R P NV VK +A G VLVEKSEAEK
Sbjct: 1 MASPSLLQSSASSFHGRFSPLAAPSSARMLSPPLRNV-----VKVSASGTVLVEKSEAEK 55
Query: 61 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALI 120
T RLKT YLE+I+P L+EEF Y NIHQVPK++KIVVNCGIGDAAQN KGLEAAM D+ALI
Sbjct: 56 TQRLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALI 115
Query: 121 TGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPN 180
TGQ+P+KTRAR SIATFKIRE +PLGIAVTLRG++MYSFLDRLINL LPRTRDFQGV+P+
Sbjct: 116 TGQKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPS 175
Query: 181 SFDGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFREG 240
SFDG+GNYSIGVK+Q VFPEIR+DA+GK +G+DVCI+TTAK+D+EGQ+LLALMGMPFREG
Sbjct: 176 SFDGNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMPFREG 235
Query: 241 GGPAN--LIRKKKLKAHHFDSKSKGK 264
GG + ++RKKKLK+HHFD+K KGK
Sbjct: 236 GGGSTGAIVRKKKLKSHHFDAKGKGK 261
>UNIPROTKB|Q3A9S8 [details] [associations]
symbol:rplE "50S ribosomal protein L5" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311
KO:K02931 Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_361106.1 ProteinModelPortal:Q3A9S8 SMR:Q3A9S8
STRING:Q3A9S8 GeneID:3728454 KEGG:chy:CHY_2297 PATRIC:21277665
BioCyc:CHYD246194:GJCN-2296-MONOMER Uniprot:Q3A9S8
Length = 179
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 96/175 (54%), Positives = 133/175 (76%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
RLK Y ++P + E+F Y N QVPK+EKIV+N G+G+A QN K ++AA+ DL ITG
Sbjct: 3 RLKDKYQNDVIPAMMEKFGYKNKMQVPKLEKIVINIGLGEALQNPKAVDAAVADLMAITG 62
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
QRPV T+A+ S+A F++R+G +G+ VTLRG+ MY F+D+ +N+ LPR RDF+G++P SF
Sbjct: 63 QRPVLTKAKKSVAGFRVRQGATIGVKVTLRGDRMYEFMDKFVNIVLPRVRDFRGLSPKSF 122
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPF 237
DG GNYS+G++EQ +FPEI YD + K +G++V TTAKTD+E + LL LMGMPF
Sbjct: 123 DGRGNYSVGLREQLIFPEIDYDKIDKVRGMEVTFVTTAKTDEEARELLQLMGMPF 177
>TIGR_CMR|CHY_2297 [details] [associations]
symbol:CHY_2297 "ribosomal protein L5" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311
KO:K02931 Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_361106.1 ProteinModelPortal:Q3A9S8 SMR:Q3A9S8
STRING:Q3A9S8 GeneID:3728454 KEGG:chy:CHY_2297 PATRIC:21277665
BioCyc:CHYD246194:GJCN-2296-MONOMER Uniprot:Q3A9S8
Length = 179
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 96/175 (54%), Positives = 133/175 (76%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
RLK Y ++P + E+F Y N QVPK+EKIV+N G+G+A QN K ++AA+ DL ITG
Sbjct: 3 RLKDKYQNDVIPAMMEKFGYKNKMQVPKLEKIVINIGLGEALQNPKAVDAAVADLMAITG 62
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
QRPV T+A+ S+A F++R+G +G+ VTLRG+ MY F+D+ +N+ LPR RDF+G++P SF
Sbjct: 63 QRPVLTKAKKSVAGFRVRQGATIGVKVTLRGDRMYEFMDKFVNIVLPRVRDFRGLSPKSF 122
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPF 237
DG GNYS+G++EQ +FPEI YD + K +G++V TTAKTD+E + LL LMGMPF
Sbjct: 123 DGRGNYSVGLREQLIFPEIDYDKIDKVRGMEVTFVTTAKTDEEARELLQLMGMPF 177
>TIGR_CMR|BA_0122 [details] [associations]
symbol:BA_0122 "ribosomal protein L5" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 InterPro:IPR020930
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B RefSeq:NP_842690.1
RefSeq:YP_016727.1 RefSeq:YP_026408.1 ProteinModelPortal:Q81VR8
SMR:Q81VR8 DNASU:1087325 EnsemblBacteria:EBBACT00000009117
EnsemblBacteria:EBBACT00000013603 EnsemblBacteria:EBBACT00000022282
GeneID:1087325 GeneID:2818210 GeneID:2848391 KEGG:ban:BA_0122
KEGG:bar:GBAA_0122 KEGG:bat:BAS0122 OMA:EQVMFHE
BioCyc:BANT260799:GJAJ-133-MONOMER
BioCyc:BANT261594:GJ7F-135-MONOMER Uniprot:Q81VR8
Length = 179
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 98/177 (55%), Positives = 133/177 (75%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
RLK + ++I P L +F+Y ++ QVPKIEKIV+N G+GDA N+K L+ A+ +L ITG
Sbjct: 3 RLKEKFQKEITPALVSKFNYKSVMQVPKIEKIVINTGVGDAVSNSKTLDNAVEELTQITG 62
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
Q+PV TRA+ SIA F++REG P+G VTLRG MY F D+L+++ LPR RDF+GV+ SF
Sbjct: 63 QKPVVTRAKKSIAGFRLREGMPIGAKVTLRGEQMYEFFDKLVSVSLPRVRDFRGVSKKSF 122
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFRE 239
DG GNY++GVKEQ +FPEI YD + K +G+D+ I TTAKTD+E + LL GMPF++
Sbjct: 123 DGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTAKTDEEARELLTQFGMPFQK 179
>TIGR_CMR|GSU_2845 [details] [associations]
symbol:GSU_2845 "ribosomal protein L5" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:NP_953888.1 ProteinModelPortal:Q748Z9 SMR:Q748Z9
GeneID:2686813 KEGG:gsu:GSU2845 PATRIC:22028537
BioCyc:GSUL243231:GH27-2811-MONOMER Uniprot:Q748Z9
Length = 179
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 102/176 (57%), Positives = 133/176 (75%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
RLK Y ++IV L ++F Y+N+ QVPKIEKIVVN G+G+A QN K L++A+ +LA I G
Sbjct: 3 RLKELYHKEIVEQLTKDFGYSNVMQVPKIEKIVVNMGLGEAIQNVKILDSAVEELAAIAG 62
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
Q+ V T+A+ SIA FK+R+G P+G VTLR MY FLDRLIN+ LPR RDF+GV+ F
Sbjct: 63 QKAVITKAKKSIAGFKLRQGMPIGCMVTLRREKMYEFLDRLINVALPRVRDFKGVSAKGF 122
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFR 238
DG GNYS+GVKEQ +FPEI YD + K KG+++ I T+AKTD+E + LL +GMPFR
Sbjct: 123 DGRGNYSLGVKEQLIFPEINYDKIDKIKGLNITIVTSAKTDEESRALLKHLGMPFR 178
>UNIPROTKB|Q9KNZ6 [details] [associations]
symbol:rplE "50S ribosomal protein L5" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 eggNOG:COG0094 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE PIR:B82058
RefSeq:NP_232212.1 ProteinModelPortal:Q9KNZ6 SMR:Q9KNZ6
PRIDE:Q9KNZ6 DNASU:2615601 GeneID:2615601 KEGG:vch:VC2584
PATRIC:20084194 Uniprot:Q9KNZ6
Length = 179
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 97/177 (54%), Positives = 133/177 (75%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
+L Y +V L ++FSYT++ QVP+IEKI +N G+G+A + K LE A +D+A+I+G
Sbjct: 3 KLHDYYKSSVVAELTKQFSYTSVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISG 62
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
Q+P+ T+AR S+A FKIREG P+G VTLRG M+ FL+RLI++ LPR RDF+GVN SF
Sbjct: 63 QKPLITKARKSVAGFKIREGYPIGCKVTLRGERMWDFLERLISIALPRVRDFRGVNGKSF 122
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFRE 239
DG GNYS+GV+EQ +FPEI YD + + +G+D+ ITTTA TD+EG+ LLA PFR+
Sbjct: 123 DGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAGTDEEGRALLAAFNFPFRK 179
>TIGR_CMR|VC_2584 [details] [associations]
symbol:VC_2584 "ribosomal protein L5" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 InterPro:IPR020930
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 eggNOG:COG0094 KO:K02931
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
PIR:B82058 RefSeq:NP_232212.1 ProteinModelPortal:Q9KNZ6 SMR:Q9KNZ6
PRIDE:Q9KNZ6 DNASU:2615601 GeneID:2615601 KEGG:vch:VC2584
PATRIC:20084194 Uniprot:Q9KNZ6
Length = 179
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 97/177 (54%), Positives = 133/177 (75%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
+L Y +V L ++FSYT++ QVP+IEKI +N G+G+A + K LE A +D+A+I+G
Sbjct: 3 KLHDYYKSSVVAELTKQFSYTSVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISG 62
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
Q+P+ T+AR S+A FKIREG P+G VTLRG M+ FL+RLI++ LPR RDF+GVN SF
Sbjct: 63 QKPLITKARKSVAGFKIREGYPIGCKVTLRGERMWDFLERLISIALPRVRDFRGVNGKSF 122
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFRE 239
DG GNYS+GV+EQ +FPEI YD + + +G+D+ ITTTA TD+EG+ LLA PFR+
Sbjct: 123 DGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAGTDEEGRALLAAFNFPFRK 179
>TIGR_CMR|CPS_0613 [details] [associations]
symbol:CPS_0613 "ribosomal protein L5" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_267363.1 ProteinModelPortal:Q489A1 SMR:Q489A1
STRING:Q489A1 PRIDE:Q489A1 GeneID:3521213 KEGG:cps:CPS_0613
PATRIC:21464553 BioCyc:CPSY167879:GI48-700-MONOMER Uniprot:Q489A1
Length = 181
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 92/177 (51%), Positives = 130/177 (73%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
+L Y + +V L+++F Y ++ QVP+IEKI +N G+G+A + K LE A NDL I+G
Sbjct: 3 KLHDLYKDTVVAELQKQFGYKSVMQVPRIEKITLNMGVGEAISDKKVLEHATNDLTAISG 62
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
Q+P+ T AR S+A FKIREG P+G VTLRG M+ FL+RLI++ +PR RDF+G+NP SF
Sbjct: 63 QKPITTVARKSVAGFKIREGYPIGTKVTLRGERMWEFLERLISISIPRIRDFRGLNPKSF 122
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFRE 239
DG GNYS+GV+EQ +FPEI YD + K +G+D+ ITT+AK ++EG LL+ PF++
Sbjct: 123 DGRGNYSMGVREQIIFPEIEYDKIDKIRGLDITITTSAKDNEEGLALLSAFDFPFKK 179
>TIGR_CMR|DET_0486 [details] [associations]
symbol:DET_0486 "ribosomal protein L5" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 OMA:FGMPFAR
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B
RefSeq:YP_181230.1 ProteinModelPortal:Q3Z969 SMR:Q3Z969
STRING:Q3Z969 GeneID:3230243 KEGG:det:DET0486 PATRIC:21608041
BioCyc:DETH243164:GJNF-486-MONOMER Uniprot:Q3Z969
Length = 179
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 91/165 (55%), Positives = 123/165 (74%)
Query: 73 VPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARN 132
VP L++ F Y NI QVPK+ K+V+N G+G+A N+K LE A D+ I GQ PV TRA+
Sbjct: 12 VPELQKAFKYENIMQVPKLVKVVINTGVGEAVSNSKALETAEADIVAIAGQHPVITRAKR 71
Query: 133 SIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGV 192
S+A FK+R G P+G+ VTLRG MY FL++L + LPR RDFQGV+ +FD HGNY++G
Sbjct: 72 SVANFKLRAGMPIGLKVTLRGQRMYDFLNKLFFITLPRVRDFQGVSNTAFDEHGNYTLGF 131
Query: 193 KEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPF 237
K+ SVFPEI ++ + KP+G++VCI TTA T +EG++LL L+GMPF
Sbjct: 132 KDHSVFPEIDFNKIEKPRGLEVCIVTTANTPEEGKKLLELLGMPF 176
>UNIPROTKB|P62403 [details] [associations]
symbol:rplE "50S ribosomal protein L5" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR002132
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0005886 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
GO:GO:0005840 EMBL:BX842574 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
PIR:G70643 RefSeq:NP_215230.1 RefSeq:NP_335161.1
RefSeq:YP_006514060.1 ProteinModelPortal:P62403 SMR:P62403
PhosSite:P12061577 PRIDE:P62403 EnsemblBacteria:EBMYCT00000002122
EnsemblBacteria:EBMYCT00000069791 GeneID:13318605 GeneID:888400
GeneID:926034 KEGG:mtc:MT0742 KEGG:mtu:Rv0716 KEGG:mtv:RVBD_0716
PATRIC:18123365 TubercuList:Rv0716 Uniprot:P62403
Length = 187
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 92/177 (51%), Positives = 130/177 (73%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
RLK Y +I LR++F Y N+ Q+P + K+VVN G+G+AA++AK + A+NDLALITG
Sbjct: 10 RLKERYRSEIRDALRKQFGYGNVMQIPTVTKVVVNMGVGEAARDAKLINGAVNDLALITG 69
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
Q+P RAR SIA FK+REG P+G+ VTLRG+ M+ FLDRL ++ LPR RDF+G++P F
Sbjct: 70 QKPEVRRARKSIAQFKLREGMPVGVRVTLRGDRMWEFLDRLTSIALPRIRDFRGLSPKQF 129
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFRE 239
DG GNY+ G+ EQ+VF E+ D + + +G+D+ + T+A TD EG+ LL +G PF+E
Sbjct: 130 DGVGNYTFGLAEQAVFHEVDVDKIDRVRGMDINVVTSAATDDEGRALLRALGFPFKE 186
>UNIPROTKB|P62399 [details] [associations]
symbol:rplE "50S ribosomal subunit protein L5"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:X01563 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006412
EMBL:U18997 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
PDB:2VHM PDBsum:2VHM PDB:2RDO PDBsum:2RDO eggNOG:COG0094
HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 PDB:3J0T
PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS
PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12
PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86 PDB:1VS6
PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T
PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE
PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1
PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4 PDB:3E1B
PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T PDB:3I20
PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR PDB:3OAS
PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0
PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V
PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC
PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV
PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ
PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B
PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R
PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT
PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ
PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:4GAR
PDBsum:4GAU PDB:3BBX PDBsum:3BBX EMBL:M10195 ProtClustDB:PRK00010
HAMAP:MF_01333_B OMA:EQVMFHE PIR:G65123 RefSeq:NP_417767.1
RefSeq:YP_492124.1 ProteinModelPortal:P62399 SMR:P62399
DIP:DIP-35914N IntAct:P62399 MINT:MINT-1238892 PaxDb:P62399
PRIDE:P62399 EnsemblBacteria:EBESCT00000000324
EnsemblBacteria:EBESCT00000015050 GeneID:12934390 GeneID:947800
KEGG:ecj:Y75_p3868 KEGG:eco:b3308 PATRIC:32122048 EchoBASE:EB0861
EcoGene:EG10868 BioCyc:EcoCyc:EG10868-MONOMER
BioCyc:ECOL316407:JW3270-MONOMER EvolutionaryTrace:P62399
Genevestigator:P62399 Uniprot:P62399
Length = 179
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 90/177 (50%), Positives = 130/177 (73%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
+L Y +++V L EF+Y ++ QVP++EKI +N G+G+A + K L+ A DLA I+G
Sbjct: 3 KLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAISG 62
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
Q+P+ T+AR S+A FKIR+G P+G VTLRG M+ F +RLI + +PR RDF+G++ SF
Sbjct: 63 QKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSF 122
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFRE 239
DG GNYS+GV+EQ +FPEI YD + + +G+D+ ITTTAK+D+EG+ LLA PFR+
Sbjct: 123 DGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK 179
>TIGR_CMR|SO_0243 [details] [associations]
symbol:SO_0243 "ribosomal protein L5" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 InterPro:IPR020930
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 eggNOG:COG0094
HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:NP_715883.1 ProteinModelPortal:Q8EK57 SMR:Q8EK57
GeneID:1168126 KEGG:son:SO_0243 PATRIC:23520179 Uniprot:Q8EK57
Length = 179
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 89/177 (50%), Positives = 129/177 (72%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
+L Y E +V L ++F YT++ QVP+IEKI +N G+G+A + K +E A+ D+ I G
Sbjct: 3 KLHDKYQETVVAELTQKFGYTSVMQVPRIEKITLNMGVGEAVADKKVMEHAVRDMTAIAG 62
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
Q+PV T AR S+A FKIREG P+G VTLRG M+ FL+RL+++ +PR RDF+G++ +F
Sbjct: 63 QKPVVTVARKSVAGFKIREGYPIGCKVTLRGERMWEFLERLVDIAIPRIRDFRGLSAKAF 122
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFRE 239
DG GNY++GV+EQ +FPEI YD + K +G+D+ ITT+AKTD+EG+ LL PF++
Sbjct: 123 DGRGNYAMGVREQIIFPEIDYDKIDKIRGMDIVITTSAKTDEEGRALLDAFNFPFKK 179
>TIGR_CMR|CBU_0250 [details] [associations]
symbol:CBU_0250 "ribosomal protein L5" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:NP_819294.1 ProteinModelPortal:Q83ER4 SMR:Q83ER4
PRIDE:Q83ER4 GeneID:1208131 KEGG:cbu:CBU_0250 PATRIC:17929193
BioCyc:CBUR227377:GJ7S-256-MONOMER Uniprot:Q83ER4
Length = 182
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 88/176 (50%), Positives = 128/176 (72%)
Query: 64 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQ 123
L+ Y + I P L++EF + ++ VP++EKI +N G+G+A + K +E AM+D+ I+GQ
Sbjct: 4 LQELYKKTITPALQKEFGFKSVMAVPRLEKITLNMGLGEAVADKKVIERAMDDMIKISGQ 63
Query: 124 RPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFD 183
+P+ T AR S A FKIR G P+G VTLR + MY FL RLI++ +PR RDF+G++P SFD
Sbjct: 64 KPLITYARKSEAGFKIRAGWPIGCKVTLRRDRMYEFLKRLISIAIPRIRDFRGLSPKSFD 123
Query: 184 GHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFRE 239
G GNYS+G++EQ VFPEI+YD + +G+D+ ITTTA+TD+EG+ LL G P ++
Sbjct: 124 GRGNYSLGIREQIVFPEIQYDKVDAIRGMDITITTTARTDEEGRALLKAFGFPLKD 179
>TIGR_CMR|SPO_0497 [details] [associations]
symbol:SPO_0497 "ribosomal protein L5" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_165759.1 ProteinModelPortal:Q5LW46 SMR:Q5LW46
GeneID:3195440 KEGG:sil:SPO0497 PATRIC:23374255 Uniprot:Q5LW46
Length = 186
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 92/181 (50%), Positives = 122/181 (67%)
Query: 58 AEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIG-DAAQNAKGLEAAMND 116
A T RLK Y E I L+EEF Y N +PK+EKIV+N G G +A +++K ++A D
Sbjct: 5 ANYTPRLKAQYAETIRAALKEEFGYKNDMMIPKLEKIVLNIGCGAEAVKDSKKAKSAQED 64
Query: 117 LALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQG 176
L+ I GQ+ + T A+ SIA F++RE P+G VTLRG MY FLDRLI + +PR RDF+G
Sbjct: 65 LSKIAGQKAITTTAKKSIAGFRVREDMPMGAKVTLRGERMYEFLDRLITIAMPRIRDFRG 124
Query: 177 VNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMP 236
V P SFDG GN+++G+KE VFPEI +D + + G+D+ I TTAKTD E + LL MP
Sbjct: 125 VKP-SFDGRGNFAMGIKEHIVFPEIDFDKVDEVWGMDIVIATTAKTDAEAKSLLKHFNMP 183
Query: 237 F 237
F
Sbjct: 184 F 184
>TIGR_CMR|CJE_1863 [details] [associations]
symbol:CJE_1863 "ribosomal protein L5" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_179833.1 ProteinModelPortal:Q5HSA2 SMR:Q5HSA2
STRING:Q5HSA2 GeneID:3232490 KEGG:cjr:CJE1863 PATRIC:20045558
BioCyc:CJEJ195099:GJC0-1902-MONOMER Uniprot:Q5HSA2
Length = 181
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 82/178 (46%), Positives = 126/178 (70%)
Query: 63 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITG 122
RLK Y + I P L +EF N +P IEK+V++ G G+ A++ K L+ + ++LI G
Sbjct: 3 RLKEKYNQSIKPALVKEFDIKNPMLIPVIEKVVISVGAGELAKDQKVLQNVADTISLIAG 62
Query: 123 QRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSF 182
Q+ V T+A+ S+A FK+REG P+G+ VTLR MY+FLD+LI++ LPR +DF+G++ + F
Sbjct: 63 QKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMYAFLDKLISIALPRVKDFRGLSRDGF 122
Query: 183 DGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFREG 240
DG GNY+ G+ EQ +FPE+ YD + + G+++ I TTA+ DK+ Q+LL L+G+PF +G
Sbjct: 123 DGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTAQNDKQAQKLLELIGVPFTKG 180
>TIGR_CMR|APH_0292 [details] [associations]
symbol:APH_0292 "ribosomal protein L5" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR002132 InterPro:IPR020930 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0000049 GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311
KO:K02931 Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 RefSeq:YP_504904.1 ProteinModelPortal:Q2GL47
SMR:Q2GL47 STRING:Q2GL47 GeneID:3929987 KEGG:aph:APH_0292
PATRIC:20949158 OMA:DSKVMDS ProtClustDB:PRK00010
BioCyc:APHA212042:GHPM-322-MONOMER HAMAP:MF_01333_B Uniprot:Q2GL47
Length = 177
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 80/154 (51%), Positives = 109/154 (70%)
Query: 84 NIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGE 143
N+ QVP++ K+ +N GIG +A ++K +++ DLA+I+ Q+PV TRAR SIA FKIR+G
Sbjct: 22 NVMQVPRVVKVCLNMGIGISAADSKVMDSCTRDLAMISAQKPVVTRARKSIAGFKIRKGF 81
Query: 144 PLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRY 203
P+G VTLRG MY FLDRLIN+ LPR RDF+G++ + DGHGN S G+KE F E+ Y
Sbjct: 82 PIGCMVTLRGKRMYEFLDRLINIALPRERDFRGLSTSQLDGHGNISFGIKEHISFLEVDY 141
Query: 204 DALGKPKGIDVCITTTAKTDKEGQRLLALMGMPF 237
D + K +G+DV I TTA D + + LL +G PF
Sbjct: 142 DKIDKVRGLDVVIVTTATNDADAKALLLELGFPF 175
>TIGR_CMR|ECH_0421 [details] [associations]
symbol:ECH_0421 "ribosomal protein L5" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042255 "ribosome
assembly" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_507239.1 ProteinModelPortal:Q2GH44 SMR:Q2GH44
STRING:Q2GH44 GeneID:3927027 KEGG:ech:ECH_0421 PATRIC:20576319
BioCyc:ECHA205920:GJNR-422-MONOMER Uniprot:Q2GH44
Length = 177
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 84/174 (48%), Positives = 115/174 (66%)
Query: 64 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQ 123
LK Y IVP L+ + Y+N+ QVPKI K+ +N G+G ++K + + + DLALI GQ
Sbjct: 2 LKDLYKSHIVPSLKTKLGYSNVMQVPKIVKVCLNIGLGIRGSDSKVMNSCVRDLALIAGQ 61
Query: 124 RPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFD 183
+PV T A+ SIA FKIR+G P+G VTLR N MY FL+RLI++ LPR +DF+G++ + FD
Sbjct: 62 KPVATYAKKSIAGFKIRKGFPIGCKVTLRNNKMYEFLERLIHVVLPREQDFKGLSVSQFD 121
Query: 184 GHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPF 237
G GN SIG+KE F EI YD + K G+D+ I T A + + + LL G PF
Sbjct: 122 GCGNLSIGIKEHISFLEIDYDKIDKILGVDINIVTNAVNNNDAKLLLMEFGFPF 175
>TIGR_CMR|NSE_0278 [details] [associations]
symbol:NSE_0278 "ribosomal protein L5" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042255 "ribosome
assembly" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_506169.1 ProteinModelPortal:Q2GEC7 STRING:Q2GEC7
GeneID:3932054 KEGG:nse:NSE_0278 PATRIC:22680649
BioCyc:NSEN222891:GHFU-305-MONOMER Uniprot:Q2GEC7
Length = 177
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 68/176 (38%), Positives = 114/176 (64%)
Query: 64 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQ 123
L++ Y + + + +E + + P+ EK+ ++ G+G A+ ++K L +A+ DL+LI GQ
Sbjct: 2 LESEYHKSALARVMKEVGVDSPVKAPRFEKVCLSVGLGGASSDSKLLASAVEDLSLIAGQ 61
Query: 124 RPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFD 183
+ V T A+ SI++FK+R+G P+G VTLR M+ F++RL+ + LP +DF+G +FD
Sbjct: 62 KAVVTVAKKSISSFKLRKGFPVGCRVTLRKRRMFDFINRLLYMALPDQKDFKGFTMRNFD 121
Query: 184 GHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFRE 239
GHGN + G+ E VFPE+ +D + G++V + TTA TD+ + LL+ G PFR+
Sbjct: 122 GHGNMAFGLTEHIVFPEVDFDKTYRIIGMNVVVVTTASTDQLARILLSCYGFPFRD 177
>SGD|S000002645 [details] [associations]
symbol:MRPL7 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0032543 "mitochondrial
translation" evidence=IC] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR002132 Pfam:PF00281 Pfam:PF00673 PROSITE:PS00358
SGD:S000002645 EMBL:BK006938 GO:GO:0005762 GO:GO:0003735
GO:GO:0032543 KO:K01426 EMBL:Z49701 RefSeq:NP_010528.3
GeneID:851829 KEGG:sce:YDR242W eggNOG:COG0094 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 OMA:PVHHLVK
OrthoDB:EOG4ZW8M3 EMBL:AY557745 PIR:S54533 RefSeq:NP_010523.3
ProteinModelPortal:P36519 SMR:P36519 DIP:DIP-6804N IntAct:P36519
MINT:MINT-613214 STRING:P36519 PaxDb:P36519 PeptideAtlas:P36519
EnsemblFungi:YDR237W GeneID:851823 KEGG:sce:YDR237W CYGD:YDR237w
HOGENOM:HOG000172464 NextBio:969698 Genevestigator:P36519
GermOnline:YDR237W Uniprot:P36519
Length = 292
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 51/155 (32%), Positives = 87/155 (56%)
Query: 88 VPKIEKIVVNCGIGDAAQNAK-GLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLG 146
+P +E +V+NC + +A +N + AA+ L ITG +P ++N + T+K+R+G +G
Sbjct: 134 IPGLESVVINCFVREARENQLLAITAALQ-LQQITGCKPHPIFSKNDVPTWKLRKGHQMG 192
Query: 147 IAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSV--FPEI--R 202
V L+G M FL L + LPR R+++G++ S + G S G+ + + FPEI
Sbjct: 193 AKVELKGKEMSQFLSTLTEIVLPRIREYKGISNQSGNRFGGISFGLTAEDIKFFPEIDAN 252
Query: 203 YDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPF 237
D+ K G+ + I T+A+ D + + LL+ PF
Sbjct: 253 QDSWPKTFGMHININTSAQLDYQARTLLSGFQFPF 287
>POMBASE|SPBC2F12.02c [details] [associations]
symbol:mrpl7 "mitochondrial ribosomal protein subunit
L7 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR002132 Pfam:PF00673 PROSITE:PS00358
PomBase:SPBC2F12.02c GO:GO:0005739 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0032543
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 PIR:T40138 RefSeq:NP_595713.1
ProteinModelPortal:O14337 STRING:O14337 EnsemblFungi:SPBC2F12.02c.1
GeneID:2540459 KEGG:spo:SPBC2F12.02c OMA:PVHHLVK OrthoDB:EOG4ZW8M3
NextBio:20801586 Uniprot:O14337
Length = 287
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 61/172 (35%), Positives = 89/172 (51%)
Query: 74 PLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNS 133
PLL + S N +P I K+VV+ +A + L + M ITG +P AR
Sbjct: 111 PLLPVKES-VNPKNLPSISKVVVSTMHKEALVDKTQLLSTMMAFRSITGLQPEIVYARKD 169
Query: 134 IATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVK 193
++ +K+R G P+G+ VTL G MY+FL L L LP+ DF+G++P S D GN S G+
Sbjct: 170 VSPWKLRSGVPVGVKVTLTGESMYTFLSILSELVLPQLHDFKGLSPTSGDQTGNISFGLP 229
Query: 194 EQ--SVFPEIR--YDALGKP-KGIDVCITTTAKTDKEGQRLLALMGMPFREG 240
+ +FP+I Y+ G +V ITT +K D R +PF +G
Sbjct: 230 SEVMPLFPQIEAVYEMYPHSLPGFNVNITTNSK-DTRLARFFVSSLIPFTDG 280
>ASPGD|ASPL0000041817 [details] [associations]
symbol:AN2268 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=IEA] InterPro:IPR002132
Pfam:PF00673 GO:GO:0006412 EMBL:BN001307 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 OMA:PVHHLVK
EnsemblFungi:CADANIAT00008960 Uniprot:C8VMW6
Length = 354
Score = 217 (81.4 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 60/175 (34%), Positives = 98/175 (56%)
Query: 72 IVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKG-LEAAMNDLALITGQRPVKTRA 130
++ LLR+ ++ NI PK+E+I ++ + +AA+ G L A L I+ + ++
Sbjct: 178 VLRLLRKPITFNNI---PKLERITIHSYVKNAAKENSGWLHVAGMALQAISNVKVETYKS 234
Query: 131 RNSIATFKIREG-EPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYS 189
+ S+A + I G + + L G M F +L+++ +PR +D+ GV S D GN +
Sbjct: 235 KTSVAKWYISPGRDTVAAKAELYGENMEHFFGKLVDIVMPRLKDWPGVKGTSGDSSGNIT 294
Query: 190 IGVKEQSV--FPEIR--YDALGKPKGIDVC-IT--TTAKTDKEGQRLLALMGMPF 237
G++ + V FPEI YD + PK I C IT TTA+TDK+ + LL+ MG+PF
Sbjct: 295 FGLEPEQVALFPEIEVNYD-MYPPKMIPGCHITLHTTARTDKDARLLLSAMGVPF 348
>CGD|CAL0006187 [details] [associations]
symbol:orf19.2214 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002132 Pfam:PF00673 CGD:CAL0006187 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000076 EMBL:AACQ01000075
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 RefSeq:XP_715995.1
RefSeq:XP_716054.1 ProteinModelPortal:Q5A2J2 STRING:Q5A2J2
GeneID:3642339 GeneID:3642400 KEGG:cal:CaO19.2214
KEGG:cal:CaO19.9759 Uniprot:Q5A2J2
Length = 287
Score = 187 (70.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 51/158 (32%), Positives = 76/158 (48%)
Query: 84 NIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGE 143
N VPK+E IVV +A ++ LA IT +P +++I +K+R G
Sbjct: 127 NNKNVPKLESIVVQSYNKNALESPWLNITTRLQLATITNVKPKILYGKSNILPWKVRVGR 186
Query: 144 PLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSV--FPEI 201
G V L M F+ L L LPR R F+G+ S D +GN S+G+ + FPE+
Sbjct: 187 ACGAKVELFDRDMSQFISTLTELVLPRIRAFKGIPRTSGDKNGNISMGLTPEDCQFFPEL 246
Query: 202 RY--DALGKPKGIDVCITTTAKTDKEGQRLLALMGMPF 237
+ + G+ + TTA+TD + LL+ G PF
Sbjct: 247 EHFQELFPNLNGLQITFKTTAQTDNHAKTLLSCYGFPF 284
>SGD|S000006306 [details] [associations]
symbol:RPL11A "Ribosomal 60S subunit protein L11A"
species:4932 "Saccharomyces cerevisiae" [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 SGD:S000006306 EMBL:BK006949 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 GO:GO:0000027 EMBL:U32445 GO:GO:0022625
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES EMBL:X01029 EMBL:AY693151 PIR:S59767 RefSeq:NP_015427.1
ProteinModelPortal:P0C0W9 SMR:P0C0W9 DIP:DIP-4764N IntAct:P0C0W9
MINT:MINT-564921 STRING:P0C0W9 PRIDE:P0C0W9 EnsemblFungi:YPR102C
GeneID:856217 KEGG:sce:YPR102C GeneTree:ENSGT00390000013411
OrthoDB:EOG4M0JB6 EvolutionaryTrace:P0C0W9 NextBio:981438
Genevestigator:P0C0W9 Uniprot:P0C0W9
Length = 174
Score = 151 (58.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/115 (33%), Positives = 64/115 (55%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
KIEK+V+N +G++ L A L ++GQ PV+++AR ++ TF IR E + + V
Sbjct: 13 KIEKLVLNISVGESGDR---LTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHV 69
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L+R GL + +++Q + +F GN+ G+ E + I+YD
Sbjct: 70 TVRGPKAEEILER----GL-KVKEYQ-LRDRNFSATGNFGFGIDEH-IDLGIKYD 117
>SGD|S000003317 [details] [associations]
symbol:RPL11B "Ribosomal 60S subunit protein L11B"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 SGD:S000003317 EMBL:BK006941 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 PDB:4B6A PDBsum:4B6A GO:GO:0000027
GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:KPKTKKN GeneTree:ENSGT00390000013411 OrthoDB:EOG4M0JB6
EMBL:Z72870 EMBL:M12933 PIR:A02764 RefSeq:NP_011599.1 PDB:2NOQ
PDBsum:2NOQ ProteinModelPortal:Q3E757 SMR:Q3E757 DIP:DIP-29386N
IntAct:Q3E757 MINT:MINT-564941 STRING:Q3E757 PaxDb:Q3E757
PRIDE:Q3E757 EnsemblFungi:YGR085C GeneID:852976 KEGG:sce:YGR085C
EvolutionaryTrace:Q3E757 NextBio:972774 Genevestigator:Q3E757
Uniprot:Q3E757
Length = 174
Score = 151 (58.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/115 (33%), Positives = 64/115 (55%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
KIEK+V+N +G++ L A L ++GQ PV+++AR ++ TF IR E + + V
Sbjct: 13 KIEKLVLNISVGESGDR---LTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHV 69
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L+R GL + +++Q + +F GN+ G+ E + I+YD
Sbjct: 70 TVRGPKAEEILER----GL-KVKEYQ-LRDRNFSATGNFGFGIDEH-IDLGIKYD 117
>WB|WBGene00004423 [details] [associations]
symbol:rpl-11.2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 HSSP:P41201 EMBL:FO080099
PIR:T29860 RefSeq:NP_508413.1 ProteinModelPortal:Q19162 SMR:Q19162
DIP:DIP-26065N MINT:MINT-1118628 STRING:Q19162 PaxDb:Q19162
EnsemblMetazoa:F07D10.1.1 EnsemblMetazoa:F07D10.1.2 GeneID:180535
KEGG:cel:CELE_F07D10.1 UCSC:F07D10.1.1 CTD:180535 WormBase:F07D10.1
InParanoid:Q19162 NextBio:909780 Uniprot:Q19162
Length = 196
Score = 148 (57.2 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 53/189 (28%), Positives = 94/189 (49%)
Query: 76 LREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIA 135
+RE+ + N+ + KI+K+ +N +G++ L A L +TGQ PV ++AR ++
Sbjct: 10 IREKKA-RNVMRELKIQKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVR 65
Query: 136 TFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQ 195
TF IR E + + T+RG L++ GL + ++++ N F GN+ GV+E
Sbjct: 66 TFGIRRNEKIAVHCTVRGPKAEEILEK----GL-KVKEYELYKEN-FSDTGNFGFGVQEH 119
Query: 196 SVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFREGGGPANLI-RKKKLKA 254
+ I+YD G+D + D+ G+R+ P R G P++ + R++ +K
Sbjct: 120 -IDLGIKYDPSIGIYGMDFYVVL----DRAGRRIAKRRRAPGRVG--PSHRVEREESIK- 171
Query: 255 HHFDSKSKG 263
F K G
Sbjct: 172 -WFQQKYDG 179
>ASPGD|ASPL0000072443 [details] [associations]
symbol:AN4475 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:BN001303 EMBL:AACD01000078 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES
OrthoDB:EOG4M0JB6 RefSeq:XP_662079.1 ProteinModelPortal:Q5B4Q5
SMR:Q5B4Q5 STRING:Q5B4Q5 EnsemblFungi:CADANIAT00005971
GeneID:2872274 KEGG:ani:AN4475.2 Uniprot:Q5B4Q5
Length = 175
Score = 143 (55.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/151 (27%), Positives = 77/151 (50%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+++K+V+N +G++ L A L ++GQ PV ++AR ++ TF IR E + + V
Sbjct: 16 RVQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKIAVHV 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKP 209
T+RG L+R GL + ++++ + +F GN+ G+ E + I+YD
Sbjct: 73 TVRGPKAEEILER----GL-KVKEYE-LRKRNFSETGNFGFGISEH-IDLGIKYDPNIGI 125
Query: 210 KGIDV--CITTTAKTDKEGQRLLALMGMPFR 238
G+D C+T + + +R + +G R
Sbjct: 126 YGMDFYCCMTRPGERVAKRRRCKSTIGASHR 156
>DICTYBASE|DDB_G0279189 [details] [associations]
symbol:rpl11 "S60 ribosomal protein L11"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 dictyBase:DDB_G0279189
GO:GO:0045335 GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 EMBL:AAFI02000030 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 KO:K02868 OMA:HMGVGES EMBL:X15382 PIR:S07562
RefSeq:XP_641729.1 ProteinModelPortal:P16168 SMR:P16168
STRING:P16168 PRIDE:P16168 EnsemblProtists:DDB0214853
GeneID:8621925 KEGG:ddi:DDB_G0279189 ProtClustDB:PTZ00156
Uniprot:P16168
Length = 202
Score = 144 (55.7 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 39/135 (28%), Positives = 71/135 (52%)
Query: 70 EKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTR 129
E P+ ++ N+ + +IEK+V+N +G++ L A L +TGQ PV ++
Sbjct: 19 EATTPVETKKSKKDNVMRGLRIEKLVLNICVGESGDR---LVRAAKVLEQLTGQTPVYSK 75
Query: 130 ARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYS 189
AR ++ +F IR E + VT+RG L++ GL + R+F+ + +F G++
Sbjct: 76 ARYTVRSFNIRRNEQIAAHVTVRGEKAAEILEK----GL-KVREFE-LRARNFSTQGSFG 129
Query: 190 IGVKEQSVFPEIRYD 204
G++E + I+YD
Sbjct: 130 FGIQEH-IDLGIKYD 143
>UNIPROTKB|Q90YV7 [details] [associations]
symbol:rpl11 "60S ribosomal protein L11" species:7998
"Ictalurus punctatus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0034504 "protein localization to nucleus" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOVERGEN:HBG055214 EMBL:AF401565
RefSeq:NP_001187040.1 UniGene:Ipu.322 ProteinModelPortal:Q90YV7
SMR:Q90YV7 GeneID:100304527 Uniprot:Q90YV7
Length = 178
Score = 131 (51.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDSGNFGFGIQEH-IDLGIKYD 120
>UNIPROTKB|E1C3K3 [details] [associations]
symbol:RPL11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006605 GO:GO:0005730
GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
GO:GO:0022625 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 OMA:HMGVGES
GeneTree:ENSGT00390000013411 EMBL:AADN02043724 IPI:IPI00602500
PRIDE:E1C3K3 Ensembl:ENSGALT00000006305 ArrayExpress:E1C3K3
Uniprot:E1C3K3
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>UNIPROTKB|F1NYL7 [details] [associations]
symbol:RPL11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
GeneTree:ENSGT00390000013411 EMBL:AADN02043724 IPI:IPI00819936
Ensembl:ENSGALT00000040531 ArrayExpress:F1NYL7 Uniprot:F1NYL7
Length = 156
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 15 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 71
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 72 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 119
>UNIPROTKB|Q3T087 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=ISS] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006605
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0042273
GO:GO:0019843 GO:GO:0034504 GO:GO:0006364 GO:GO:0022625
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 EMBL:BC102524
IPI:IPI00688640 RefSeq:NP_001069049.1 UniGene:Bt.19271
ProteinModelPortal:Q3T087 SMR:Q3T087 STRING:Q3T087 PRIDE:Q3T087
Ensembl:ENSBTAT00000027850 GeneID:512745 KEGG:bta:512745 CTD:6135
HOVERGEN:HBG055214 InParanoid:Q3T087 OrthoDB:EOG4BG8X4
NextBio:20870541 Uniprot:Q3T087
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>UNIPROTKB|E2R9G7 [details] [associations]
symbol:RPL11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 CTD:6135 EMBL:AAEX03001751
RefSeq:NP_001240835.1 ProteinModelPortal:E2R9G7
Ensembl:ENSCAFT00000035556 GeneID:100684296 KEGG:cfa:100684296
Uniprot:E2R9G7
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>UNIPROTKB|P62913 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0042273 "ribosomal large subunit
biogenesis" evidence=IMP] [GO:0006605 "protein targeting"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0006412 "translation"
evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 GO:GO:0042273
GO:GO:0019843 GO:GO:0034504 GO:GO:0006364 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES CTD:6135 HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4
ChiTaRS:RPL11 EMBL:X79234 EMBL:L05092 EMBL:AF101385 EMBL:BC018970
EMBL:AF432212 EMBL:AB007171 IPI:IPI00376798 IPI:IPI00746438
PIR:S45049 RefSeq:NP_000966.2 RefSeq:NP_001186731.1
UniGene:Hs.719951 ProteinModelPortal:P62913 SMR:P62913
IntAct:P62913 MINT:MINT-1140097 STRING:P62913 PhosphoSite:P62913
DMDM:51702795 SWISS-2DPAGE:P62913 PaxDb:P62913 PRIDE:P62913
DNASU:6135 Ensembl:ENST00000374550 GeneID:6135 KEGG:hsa:6135
UCSC:uc001bhk.3 UCSC:uc001bhl.3 GeneCards:GC01P024018
HGNC:HGNC:10301 HPA:HPA002734 MIM:604175 MIM:612562
neXtProt:NX_P62913 Orphanet:124 PharmGKB:PA34664 InParanoid:P62913
PhylomeDB:P62913 GenomeRNAi:6135 NextBio:23831 PMAP-CutDB:P62913
ArrayExpress:P62913 Bgee:P62913 CleanEx:HS_RPL11
Genevestigator:P62913 GermOnline:ENSG00000142676 Uniprot:P62913
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>UNIPROTKB|Q5VVC8 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
HOGENOM:HOG000231312 HOVERGEN:HBG055214 ChiTaRS:RPL11
UniGene:Hs.719951 HGNC:HGNC:10301 EMBL:AL451000 SMR:Q5VVC8
Ensembl:ENST00000458455 Uniprot:Q5VVC8
Length = 174
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 14 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 70
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 71 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 118
>UNIPROTKB|Q5VVC9 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PROSITE:PS00358 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312
HOVERGEN:HBG055214 ChiTaRS:RPL11 UniGene:Hs.719951 HGNC:HGNC:10301
EMBL:AL451000 SMR:Q5VVC9 Ensembl:ENST00000443624 Uniprot:Q5VVC9
Length = 131
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 14 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 70
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 71 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 118
>UNIPROTKB|I3LD74 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9823 "Sus
scrofa" [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006605 GO:GO:0005730
GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
GO:GO:0022625 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 OMA:HMGVGES
GeneTree:ENSGT00390000013411 EMBL:FP475977
ProteinModelPortal:I3LD74 SMR:I3LD74 PRIDE:I3LD74
Ensembl:ENSSSCT00000022802 Uniprot:I3LD74
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>UNIPROTKB|Q29205 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=ISS] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0005730 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 GO:GO:0034504 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868 CTD:6135
HOVERGEN:HBG055214 EMBL:AY547313 EMBL:AY550042 EMBL:F14532
RefSeq:NP_001001638.1 UniGene:Ssc.56710 ProteinModelPortal:Q29205
SMR:Q29205 GeneID:414422 KEGG:ssc:414422 Uniprot:Q29205
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>UNIPROTKB|Q5RC11 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9601
"Pongo abelii" [GO:0005730 "nucleolus" evidence=ISS] [GO:0034504
"protein localization to nucleus" evidence=ISS] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 GO:GO:0034504 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868
CTD:6135 HOVERGEN:HBG055214 EMBL:CR858471 RefSeq:NP_001125385.1
UniGene:Pab.13400 HSSP:P41201 ProteinModelPortal:Q5RC11 SMR:Q5RC11
GeneID:100172290 KEGG:pon:100172290 Uniprot:Q5RC11
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>UNIPROTKB|Q6QMZ8 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:34839
"Chinchilla lanigera" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0034504 "protein localization to nucleus" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOVERGEN:HBG055214 EMBL:AY533222
ProteinModelPortal:Q6QMZ8 SMR:Q6QMZ8 MINT:MINT-6733032 PRIDE:Q6QMZ8
Uniprot:Q6QMZ8
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>MGI|MGI:1914275 [details] [associations]
symbol:Rpl11 "ribosomal protein L11" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO;IDA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006412
"translation" evidence=IEA] [GO:0006605 "protein targeting"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0034504 "protein
localization to nucleus" evidence=IMP] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISO] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 MGI:MGI:1914275 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 CTD:6135
HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4 EMBL:AK002998 EMBL:AK008422
EMBL:AK011211 EMBL:AK011800 EMBL:AK013923 EMBL:AK088967
EMBL:AK153486 EMBL:AK164445 EMBL:AK169053 EMBL:BC025077
EMBL:BC069896 IPI:IPI00331461 RefSeq:NP_080195.1 UniGene:Mm.276856
ProteinModelPortal:Q9CXW4 SMR:Q9CXW4 IntAct:Q9CXW4 STRING:Q9CXW4
PhosphoSite:Q9CXW4 PaxDb:Q9CXW4 PRIDE:Q9CXW4
Ensembl:ENSMUST00000102536 GeneID:67025 KEGG:mmu:67025
NextBio:323340 Bgee:Q9CXW4 CleanEx:MM_RPL11 Genevestigator:Q9CXW4
GermOnline:ENSMUSG00000070343 Uniprot:Q9CXW4
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>POMBASE|SPAC26A3.07c [details] [associations]
symbol:rpl1101 "60S ribosomal protein L11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 PomBase:SPBC17G9.10
PomBase:SPAC26A3.07c EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 GO:GO:0022627 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES
OrthoDB:EOG4M0JB6 EMBL:AB016005 EMBL:AF201080 PIR:T38395
RefSeq:NP_594150.1 RefSeq:NP_595899.1 ProteinModelPortal:Q10157
SMR:Q10157 STRING:Q10157 EnsemblFungi:SPAC26A3.07c.1
EnsemblFungi:SPBC17G9.10.1 GeneID:2539846 GeneID:2541591
KEGG:spo:SPAC26A3.07c KEGG:spo:SPBC17G9.10 NextBio:20800993
Uniprot:Q10157
Length = 174
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 40/140 (28%), Positives = 70/140 (50%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+V+N +G++ L A L ++GQ PV ++AR +I F IR E + V
Sbjct: 13 RISKLVLNISLGESGDR---LTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRNEKIACHV 69
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKP 209
T+RG L+R GL + ++++ + +F GN+ G++E + I+YD
Sbjct: 70 TVRGPKAEEILER----GL-KVKEYE-LKKRNFSATGNFGFGIQEH-IDLGIKYDPSIGI 122
Query: 210 KGIDVCITTTAKTDKEGQRL 229
G+D + D+ G R+
Sbjct: 123 YGMDFYVVM----DRPGMRV 138
>POMBASE|SPBC17G9.10 [details] [associations]
symbol:rpl1102 "60S ribosomal protein L11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
PomBase:SPBC17G9.10 PomBase:SPAC26A3.07c EMBL:CU329670
GenomeReviews:CU329670_GR EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0022627 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES OrthoDB:EOG4M0JB6 EMBL:AB016005 EMBL:AF201080
PIR:T38395 RefSeq:NP_594150.1 RefSeq:NP_595899.1
ProteinModelPortal:Q10157 SMR:Q10157 STRING:Q10157
EnsemblFungi:SPAC26A3.07c.1 EnsemblFungi:SPBC17G9.10.1
GeneID:2539846 GeneID:2541591 KEGG:spo:SPAC26A3.07c
KEGG:spo:SPBC17G9.10 NextBio:20800993 Uniprot:Q10157
Length = 174
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 40/140 (28%), Positives = 70/140 (50%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+V+N +G++ L A L ++GQ PV ++AR +I F IR E + V
Sbjct: 13 RISKLVLNISLGESGDR---LTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRNEKIACHV 69
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKP 209
T+RG L+R GL + ++++ + +F GN+ G++E + I+YD
Sbjct: 70 TVRGPKAEEILER----GL-KVKEYE-LKKRNFSATGNFGFGIQEH-IDLGIKYDPSIGI 122
Query: 210 KGIDVCITTTAKTDKEGQRL 229
G+D + D+ G R+
Sbjct: 123 YGMDFYVVM----DRPGMRV 138
>RGD|1308681 [details] [associations]
symbol:Rpl11 "ribosomal protein L11" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0006364
"rRNA processing" evidence=IEA;ISO] [GO:0006412 "translation"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA;ISO]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IEA;ISO] [GO:0034504 "protein
localization to nucleus" evidence=ISO;ISS] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IEA;ISO] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 RGD:1308681 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312
GeneTree:ENSGT00390000013411 HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4
EMBL:X62146 IPI:IPI00359103 PIR:JT0606 UniGene:Rn.129770
UniGene:Rn.14687 ProteinModelPortal:P62914 SMR:P62914 IntAct:P62914
STRING:P62914 PRIDE:P62914 Ensembl:ENSRNOT00000030043
UCSC:RGD:1308681 InParanoid:P62914 ArrayExpress:P62914
Genevestigator:P62914 GermOnline:ENSRNOG00000026260 Uniprot:P62914
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>UNIPROTKB|F2Z3S4 [details] [associations]
symbol:Rpl11 "60S ribosomal protein L11" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 RGD:1308681
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
IPI:IPI00779353 ProteinModelPortal:F2Z3S4
Ensembl:ENSRNOT00000039585 Uniprot:F2Z3S4
Length = 176
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 14 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 70
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 71 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 118
>ZFIN|ZDB-GENE-040625-147 [details] [associations]
symbol:rpl11 "ribosomal protein L11" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0009790 "embryo development" evidence=IMP] [GO:0042593 "glucose
homeostasis" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IMP] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
ZFIN:ZDB-GENE-040625-147 GO:GO:0006917 GO:GO:0006412 GO:GO:0042593
GO:GO:0005840 GO:GO:0009790 GO:GO:0030218 GO:GO:0003735
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 CTD:6135
HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4 EMBL:CABZ01086825
EMBL:BC071420 EMBL:AY648841 IPI:IPI00492905 RefSeq:NP_001002139.1
UniGene:Dr.32573 SMR:Q6IQI6 STRING:Q6IQI6
Ensembl:ENSDART00000063870 GeneID:415229 KEGG:dre:415229
InParanoid:Q6IQI6 NextBio:20818895 Uniprot:Q6IQI6
Length = 178
Score = 130 (50.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ L A L +TGQ PV ++AR ++ +F IR E + +
Sbjct: 16 RIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHC 72
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
T+RG L++ GL + R+++ + N+F GN+ G++E + I+YD
Sbjct: 73 TVRGAKAEEILEK----GL-KVREYE-LRKNNFSDTGNFGFGIQEH-IDLGIKYD 120
>WB|WBGene00004422 [details] [associations]
symbol:rpl-11.1 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040039 "inductive cell
migration" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0009792
GO:GO:0040010 GO:GO:0006412 GO:GO:0005840 GO:GO:0040035
GO:GO:0003735 GO:GO:0040039 GO:GO:0007276 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:KPKTKKN
GeneTree:ENSGT00390000013411 EMBL:FO081343 PIR:T30978
RefSeq:NP_504008.1 ProteinModelPortal:Q94300 SMR:Q94300
DIP:DIP-25364N MINT:MINT-1088988 STRING:Q94300 PaxDb:Q94300
PRIDE:Q94300 EnsemblMetazoa:T22F3.4.1 EnsemblMetazoa:T22F3.4.2
GeneID:178778 KEGG:cel:CELE_T22F3.4 UCSC:T22F3.4.1 CTD:178778
WormBase:T22F3.4 InParanoid:Q94300 NextBio:902506 Uniprot:Q94300
Length = 196
Score = 135 (52.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/169 (27%), Positives = 85/169 (50%)
Query: 84 NIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGE 143
N+ + KI+K+ +N +G++ L A L +TGQ PV ++AR ++ TF IR E
Sbjct: 17 NVMRELKIQKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRNE 73
Query: 144 PLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRY 203
+ + T+RG L++ GL + ++++ N F GN+ GV+E + I+Y
Sbjct: 74 KIAVHCTVRGPKAEEILEK----GL-KVKEYELFKEN-FSDTGNFGFGVQEH-IDLGIKY 126
Query: 204 D-ALGKPKGIDVCITTTAKTDKEGQRLLALMGMPFREGGGPANLIRKKK 251
D +G G+D + ++ G R+ P R G P++ + K++
Sbjct: 127 DPGIGI-YGMDFYVVL----NRNGVRVSKRRRAPGRIG--PSHRVDKEE 168
>FB|FBgn0013325 [details] [associations]
symbol:RpL11 "Ribosomal protein L11" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=IDA;NAS] [GO:0006412 "translation" evidence=IEA;NAS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0051298
"centrosome duplication" evidence=IMP] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:AE013599 GO:GO:0051298 GO:GO:0005811
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
GO:GO:0000022 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868 OMA:HMGVGES
GeneTree:ENSGT00390000013411 CTD:6135 EMBL:U15643 EMBL:AY094790
PIR:S60245 RefSeq:NP_477054.1 UniGene:Dm.700
ProteinModelPortal:P46222 SMR:P46222 DIP:DIP-18297N IntAct:P46222
MINT:MINT-767987 STRING:P46222 PaxDb:P46222 PRIDE:P46222
EnsemblMetazoa:FBtr0086533 GeneID:37235 KEGG:dme:Dmel_CG7726
FlyBase:FBgn0013325 InParanoid:P46222 OrthoDB:EOG4D7WNX
PhylomeDB:P46222 ChiTaRS:RPL11 GenomeRNAi:37235 NextBio:802670
GermOnline:CG7726 Uniprot:P46222
Length = 184
Score = 127 (49.8 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 91 IEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVT 150
I K+ +N +G++ L A L +TGQ+PV ++AR ++ +F IR E + + T
Sbjct: 22 IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 78
Query: 151 LRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 204
+RG L+R GL + R+++ + +F GN+ G++E + I+YD
Sbjct: 79 VRGAKAEEILER----GL-KVREYE-LRRENFSSTGNFGFGIQEH-IDLGIKYD 125
>GENEDB_PFALCIPARUM|PF07_0079 [details] [associations]
symbol:PF07_0079 "60S ribosomal protein L11a,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR002132 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
GO:GO:0006412 GO:GO:0003735 EMBL:AL844506 GO:GO:0022625
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES
ProtClustDB:PTZ00156 HSSP:P41201 RefSeq:XP_001349097.1
ProteinModelPortal:Q8IBQ6 SMR:Q8IBQ6 PRIDE:Q8IBQ6
EnsemblProtists:PF07_0079:mRNA GeneID:2655123 KEGG:pfa:PF07_0079
EuPathDB:PlasmoDB:PF3D7_0719600 Uniprot:Q8IBQ6
Length = 173
Score = 121 (47.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 34/130 (26%), Positives = 66/130 (50%)
Query: 84 NIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGE 143
N+ + K+ K+V+N +G++ L A L +T Q+P+ + R +I +F +R E
Sbjct: 7 NVMREIKVNKLVLNICVGESGDR---LTRAARVLEQLTEQKPIFGKCRFTIRSFGVRRNE 63
Query: 144 PLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRY 203
+ VT+RG L++ GL + ++++ + +F GN+ G++E + I+Y
Sbjct: 64 KISCFVTVRGKKALEILEK----GL-KVKEYE-LRRKNFSDTGNFGFGIQEH-IDLGIKY 116
Query: 204 DALGKPKGID 213
D G+D
Sbjct: 117 DPSTGIYGMD 126
>UNIPROTKB|Q8IBQ6 [details] [associations]
symbol:PF07_0079 "60S ribosomal protein L11a, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR002132
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 GO:GO:0006412
GO:GO:0003735 EMBL:AL844506 GO:GO:0022625 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES ProtClustDB:PTZ00156
HSSP:P41201 RefSeq:XP_001349097.1 ProteinModelPortal:Q8IBQ6
SMR:Q8IBQ6 PRIDE:Q8IBQ6 EnsemblProtists:PF07_0079:mRNA
GeneID:2655123 KEGG:pfa:PF07_0079 EuPathDB:PlasmoDB:PF3D7_0719600
Uniprot:Q8IBQ6
Length = 173
Score = 121 (47.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 34/130 (26%), Positives = 66/130 (50%)
Query: 84 NIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGE 143
N+ + K+ K+V+N +G++ L A L +T Q+P+ + R +I +F +R E
Sbjct: 7 NVMREIKVNKLVLNICVGESGDR---LTRAARVLEQLTEQKPIFGKCRFTIRSFGVRRNE 63
Query: 144 PLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRY 203
+ VT+RG L++ GL + ++++ + +F GN+ G++E + I+Y
Sbjct: 64 KISCFVTVRGKKALEILEK----GL-KVKEYE-LRRKNFSDTGNFGFGIQEH-IDLGIKY 116
Query: 204 DALGKPKGID 213
D G+D
Sbjct: 117 DPSTGIYGMD 126
>TAIR|locus:2052432 [details] [associations]
symbol:RPL16A "ribosomal protein large subunit 16A"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS;IDA;TAS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0009506
GO:GO:0009507 GO:GO:0005773 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:AC006931
GO:GO:0019843 GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 EMBL:X81799
EMBL:AY074636 IPI:IPI00547807 PIR:F84857 RefSeq:NP_850376.2
UniGene:At.50823 ProteinModelPortal:P42795 SMR:P42795 STRING:P42795
PRIDE:P42795 ProMEX:P42795 EnsemblPlants:AT2G42740.1 GeneID:818874
KEGG:ath:AT2G42740 GeneFarm:167 TAIR:At2g42740 HOGENOM:HOG000231312
InParanoid:P42795 KO:K02868 OMA:HMGVGES PhylomeDB:P42795
ProtClustDB:CLSN2684740 Genevestigator:P42795 GermOnline:AT2G42740
Uniprot:P42795
Length = 182
Score = 122 (48.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/124 (28%), Positives = 64/124 (51%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
K++K+V+N +G++ L A L ++GQ PV ++AR ++ +F IR E + V
Sbjct: 15 KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 71
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKP 209
T+RG L+ GL + ++++ + N F G + G++E + I+YD
Sbjct: 72 TVRGEKAMQLLES----GL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 124
Query: 210 KGID 213
G+D
Sbjct: 125 YGMD 128
>TAIR|locus:2099024 [details] [associations]
symbol:AT3G58700 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS;IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005773 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016020 EMBL:AL161549 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL035526 EMBL:AL353032 EMBL:AB012245
GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
ProtClustDB:CLSN2684740 EMBL:X81798 EMBL:X81800 EMBL:AF326876
EMBL:AF339697 EMBL:AY039570 EMBL:AY129487 EMBL:AF385722
EMBL:AY078021 EMBL:AY085232 EMBL:AY086211 EMBL:AY086300 EMBL:Z29034
IPI:IPI00537168 IPI:IPI00541507 PIR:S49033 PIR:T49153
RefSeq:NP_191429.1 RefSeq:NP_567563.1 RefSeq:NP_568649.2
RefSeq:NP_851137.1 UniGene:At.18929 UniGene:At.22889
ProteinModelPortal:P42794 SMR:P42794 STRING:P42794
EnsemblPlants:AT3G58700.1 EnsemblPlants:AT4G18730.1
EnsemblPlants:AT5G45775.2 GeneID:825039 GeneID:827607 GeneID:834617
KEGG:ath:AT3G58700 KEGG:ath:AT4G18730 KEGG:ath:AT5G45775
GeneFarm:173 GeneFarm:174 GeneFarm:220 TAIR:At3g58700
TAIR:At4g18730 TAIR:At5g45775 InParanoid:P42794 OMA:KPKTKKN
PhylomeDB:P42794 Genevestigator:P42794 GermOnline:AT3G58700
Uniprot:P42794
Length = 182
Score = 122 (48.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/124 (28%), Positives = 64/124 (51%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
K++K+V+N +G++ L A L ++GQ PV ++AR ++ +F IR E + V
Sbjct: 15 KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 71
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKP 209
T+RG L+ GL + ++++ + N F G + G++E + I+YD
Sbjct: 72 TVRGEKAMQLLES----GL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 124
Query: 210 KGID 213
G+D
Sbjct: 125 YGMD 128
>TAIR|locus:2124112 [details] [associations]
symbol:RPL16B "ribosomal protein L16B" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS;IDA;TAS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005773 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016020 EMBL:AL161549 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL035526 EMBL:AL353032 EMBL:AB012245
GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
ProtClustDB:CLSN2684740 EMBL:X81798 EMBL:X81800 EMBL:AF326876
EMBL:AF339697 EMBL:AY039570 EMBL:AY129487 EMBL:AF385722
EMBL:AY078021 EMBL:AY085232 EMBL:AY086211 EMBL:AY086300 EMBL:Z29034
IPI:IPI00537168 IPI:IPI00541507 PIR:S49033 PIR:T49153
RefSeq:NP_191429.1 RefSeq:NP_567563.1 RefSeq:NP_568649.2
RefSeq:NP_851137.1 UniGene:At.18929 UniGene:At.22889
ProteinModelPortal:P42794 SMR:P42794 STRING:P42794
EnsemblPlants:AT3G58700.1 EnsemblPlants:AT4G18730.1
EnsemblPlants:AT5G45775.2 GeneID:825039 GeneID:827607 GeneID:834617
KEGG:ath:AT3G58700 KEGG:ath:AT4G18730 KEGG:ath:AT5G45775
GeneFarm:173 GeneFarm:174 GeneFarm:220 TAIR:At3g58700
TAIR:At4g18730 TAIR:At5g45775 InParanoid:P42794 OMA:KPKTKKN
PhylomeDB:P42794 Genevestigator:P42794 GermOnline:AT3G58700
Uniprot:P42794
Length = 182
Score = 122 (48.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/124 (28%), Positives = 64/124 (51%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
K++K+V+N +G++ L A L ++GQ PV ++AR ++ +F IR E + V
Sbjct: 15 KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 71
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKP 209
T+RG L+ GL + ++++ + N F G + G++E + I+YD
Sbjct: 72 TVRGEKAMQLLES----GL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 124
Query: 210 KGID 213
G+D
Sbjct: 125 YGMD 128
>TAIR|locus:505006673 [details] [associations]
symbol:AT5G45775 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 EMBL:AL161549 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 EMBL:AL035526 EMBL:AL353032
EMBL:AB012245 GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
HOGENOM:HOG000231312 KO:K02868 ProtClustDB:CLSN2684740 EMBL:X81798
EMBL:X81800 EMBL:AF326876 EMBL:AF339697 EMBL:AY039570 EMBL:AY129487
EMBL:AF385722 EMBL:AY078021 EMBL:AY085232 EMBL:AY086211
EMBL:AY086300 EMBL:Z29034 IPI:IPI00537168 IPI:IPI00541507
PIR:S49033 PIR:T49153 RefSeq:NP_191429.1 RefSeq:NP_567563.1
RefSeq:NP_568649.2 RefSeq:NP_851137.1 UniGene:At.18929
UniGene:At.22889 ProteinModelPortal:P42794 SMR:P42794 STRING:P42794
EnsemblPlants:AT3G58700.1 EnsemblPlants:AT4G18730.1
EnsemblPlants:AT5G45775.2 GeneID:825039 GeneID:827607 GeneID:834617
KEGG:ath:AT3G58700 KEGG:ath:AT4G18730 KEGG:ath:AT5G45775
GeneFarm:173 GeneFarm:174 GeneFarm:220 TAIR:At3g58700
TAIR:At4g18730 TAIR:At5g45775 InParanoid:P42794 OMA:KPKTKKN
PhylomeDB:P42794 Genevestigator:P42794 GermOnline:AT3G58700
Uniprot:P42794
Length = 182
Score = 122 (48.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/124 (28%), Positives = 64/124 (51%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
K++K+V+N +G++ L A L ++GQ PV ++AR ++ +F IR E + V
Sbjct: 15 KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 71
Query: 150 TLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKP 209
T+RG L+ GL + ++++ + N F G + G++E + I+YD
Sbjct: 72 TVRGEKAMQLLES----GL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 124
Query: 210 KGID 213
G+D
Sbjct: 125 YGMD 128
>UNIPROTKB|F1M7C1 [details] [associations]
symbol:F1M7C1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 PROSITE:PS00358 GO:GO:0006605
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0042273
GO:GO:0006364 GO:GO:0022625 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 IPI:IPI00781571
Ensembl:ENSRNOT00000060517 Uniprot:F1M7C1
Length = 123
Score = 96 (38.9 bits), Expect = 0.00020, P = 0.00020
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 90 KIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAV 149
+I K+ +N +G++ + A+ + L +TGQ P+ ++AR ++ +F IR E + +
Sbjct: 11 RIRKLCLNICVGESTRLARAAKV----LEQLTGQTPMFSKARYTVRSFDIRRNEKIAVRC 66
Query: 150 TLRGNMMYSFLDR 162
T+RG L+R
Sbjct: 67 TVRGAKAEEILER 79
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 267 267 0.00095 114 3 11 22 0.37 34
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 579 (62 KB)
Total size of DFA: 167 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.14u 0.10s 21.24t Elapsed: 00:00:01
Total cpu time: 21.14u 0.10s 21.24t Elapsed: 00:00:01
Start: Fri May 10 07:04:20 2013 End: Fri May 10 07:04:21 2013