Query 024444
Match_columns 267
No_of_seqs 181 out of 1350
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 04:39:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024444.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024444hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 5.9E-53 1.3E-57 362.6 21.6 221 33-266 4-225 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 6E-51 1.3E-55 362.2 23.2 221 35-266 49-272 (296)
3 COG0580 GlpF Glycerol uptake f 100.0 1.4E-49 3.1E-54 340.7 21.8 224 38-266 3-239 (241)
4 KOG0224 Aquaporin (major intri 100.0 7.6E-51 1.6E-55 352.1 13.1 224 36-265 28-273 (316)
5 PTZ00016 aquaglyceroporin; Pro 100.0 6.1E-49 1.3E-53 350.2 25.1 223 37-266 47-289 (294)
6 PF00230 MIP: Major intrinsic 100.0 1E-49 2.2E-54 345.0 19.4 224 33-262 1-227 (227)
7 PRK05420 aquaporin Z; Provisio 100.0 3.6E-48 7.7E-53 335.1 24.6 219 40-267 2-228 (231)
8 PLN00166 aquaporin TIP2; Provi 100.0 1.7E-47 3.6E-52 334.0 23.8 222 34-265 12-235 (250)
9 PLN00167 aquaporin TIP5; Provi 100.0 3.1E-47 6.8E-52 333.1 25.2 224 32-266 14-239 (256)
10 PLN00182 putative aquaporin NI 100.0 2.3E-47 5.1E-52 337.3 24.0 216 36-266 38-253 (283)
11 PLN00027 aquaporin TIP; Provis 100.0 2.8E-47 6E-52 333.5 22.5 224 32-266 12-238 (252)
12 PLN00026 aquaporin NIP; Provi 100.0 5.6E-47 1.2E-51 336.1 22.5 215 36-266 67-281 (298)
13 PLN00183 putative aquaporin NI 100.0 1.6E-45 3.4E-50 324.5 22.1 215 36-266 41-255 (274)
14 cd00333 MIP Major intrinsic pr 100.0 1.2E-44 2.6E-49 313.5 22.0 220 41-265 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 1.6E-42 3.5E-47 297.8 19.0 214 45-262 1-216 (216)
16 PLN00182 putative aquaporin NI 99.6 3.2E-15 7E-20 132.7 10.3 98 38-144 157-254 (283)
17 cd00333 MIP Major intrinsic pr 99.6 1E-14 2.3E-19 126.3 9.9 99 37-141 127-227 (228)
18 PLN00026 aquaporin NIP; Provi 99.6 1.3E-14 2.7E-19 129.5 9.1 98 38-144 185-282 (298)
19 PLN00183 putative aquaporin NI 99.5 2.1E-14 4.5E-19 127.1 9.4 99 39-146 160-258 (274)
20 TIGR00861 MIP MIP family chann 99.5 1.1E-13 2.3E-18 119.1 8.7 96 37-138 119-215 (216)
21 PLN00184 aquaporin NIP1; Provi 99.4 1.4E-13 3.1E-18 122.9 7.3 103 160-266 50-154 (296)
22 KOG0223 Aquaporin (major intri 99.4 1.7E-13 3.7E-18 118.4 4.6 100 37-146 129-228 (238)
23 PLN00167 aquaporin TIP5; Provi 99.3 2.6E-12 5.6E-17 112.9 7.6 105 160-266 18-127 (256)
24 PLN00166 aquaporin TIP2; Provi 99.3 9.8E-12 2.1E-16 108.9 10.8 103 38-147 138-240 (250)
25 PRK05420 aquaporin Z; Provisio 99.3 1.7E-11 3.7E-16 106.3 9.5 99 38-145 130-229 (231)
26 PLN00027 aquaporin TIP; Provis 99.3 3.7E-11 8E-16 105.5 11.7 101 38-145 140-240 (252)
27 PTZ00016 aquaglyceroporin; Pro 99.2 4.5E-11 9.7E-16 107.1 8.9 102 37-145 181-291 (294)
28 PF00230 MIP: Major intrinsic 99.1 3.5E-10 7.6E-15 97.8 9.7 95 38-139 133-227 (227)
29 COG0580 GlpF Glycerol uptake f 99.0 9.5E-10 2.1E-14 95.0 9.1 100 37-144 133-240 (241)
30 KOG0224 Aquaporin (major intri 98.3 6E-07 1.3E-11 79.1 4.9 97 162-260 30-127 (316)
31 COG2116 FocA Formate/nitrite f 94.8 0.63 1.4E-05 41.1 11.7 182 74-267 62-258 (265)
32 PRK10805 formate transporter; 91.7 8.7 0.00019 34.5 14.2 106 76-185 68-183 (285)
33 PF01226 Form_Nir_trans: Forma 90.5 9.6 0.00021 33.5 13.1 113 74-188 55-175 (250)
34 TIGR00790 fnt formate/nitrite 74.7 57 0.0012 28.3 11.7 106 76-184 43-158 (239)
35 PRK11562 nitrite transporter N 68.2 88 0.0019 27.8 15.9 106 77-186 59-173 (268)
36 COG0730 Predicted permeases [G 45.9 2E+02 0.0042 24.9 9.3 30 113-142 68-97 (258)
37 PRK09713 focB putative formate 39.0 2.9E+02 0.0062 24.8 14.5 108 76-186 67-183 (282)
38 PF03033 Glyco_transf_28: Glyc 37.2 11 0.00024 28.9 -0.0 20 96-115 6-25 (139)
39 PRK12446 undecaprenyldiphospho 35.4 8.7 0.00019 35.3 -1.0 22 93-114 6-27 (352)
40 PF04632 FUSC: Fusaric acid re 32.9 4.9E+02 0.011 25.6 14.3 34 112-145 380-413 (650)
41 TIGR02762 TraL_TIGR type IV co 28.6 10 0.00023 28.1 -1.4 18 235-252 61-78 (95)
42 COG0306 PitA Phosphate/sulphat 28.0 4.7E+02 0.01 23.9 9.9 137 99-267 20-159 (326)
43 PF03842 Silic_transp: Silicon 26.3 5.5E+02 0.012 24.5 8.9 111 80-191 138-252 (512)
44 PF03169 OPT: OPT oligopeptide 23.5 6E+02 0.013 25.2 9.6 20 162-181 466-485 (624)
45 PRK10712 PTS system fructose-s 23.2 7.1E+02 0.015 24.7 9.7 24 244-267 530-553 (563)
46 PF14034 Spore_YtrH: Sporulati 22.6 1.8E+02 0.004 21.9 4.3 47 99-145 53-101 (102)
47 PF01925 TauE: Sulfite exporte 21.5 4.9E+02 0.011 21.8 8.7 26 115-140 60-85 (240)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.9e-53 Score=362.62 Aligned_cols=221 Identities=51% Similarity=0.752 Sum_probs=200.6
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHH
Q 024444 33 ELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFL 112 (267)
Q Consensus 33 ~~~~~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l 112 (267)
+.+.++.+|++++||++|++++|++|+++...+.. +...+.+.+++.+|+++++.+++++++||||+|||||+++++
T Consensus 4 ~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~---~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~ 80 (238)
T KOG0223|consen 4 ELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKY---GGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAV 80 (238)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---CCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHH
Confidence 44568899999999999999999999988766542 234567889999999999999999999999999999999999
Q ss_pred hccCcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCCcccccCCCccchhHHHHHHHHHHHHHHHHH-hcCCCCCC
Q 024444 113 ARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSA 191 (267)
Q Consensus 113 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~-~~~~~~~~ 191 (267)
.|++++.+++.|+++|++|+++|+.+.+.+.++.....+.+.+.+.++.+..|+++.|++.||+|++++++ .+|+|++
T Consensus 81 ~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~- 159 (238)
T KOG0223|consen 81 GGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS- 159 (238)
T ss_pred hCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc-
Confidence 99999999999999999999999999999998764444555667888999999999999999999999998 7777765
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHHHHhh
Q 024444 192 RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFYDILN 266 (267)
Q Consensus 192 ~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~~ 266 (267)
.+.|+.||+++.+.++..+++||++|||||+|||+++.+ .|++|||||+||++|+++++++||++.
T Consensus 160 ------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~---~w~~hwiYwvgP~~Ga~~a~~~y~~v~ 225 (238)
T KOG0223|consen 160 ------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG---SWDDHWIYWVGPLLGAILAALIYRLVF 225 (238)
T ss_pred ------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc---CCCcEEEEEhhHHHHHHHHHHHHHHhc
Confidence 378999999999999999999999999999999999986 499999999999999999999999874
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=6e-51 Score=362.23 Aligned_cols=221 Identities=26% Similarity=0.387 Sum_probs=186.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhc
Q 024444 35 KLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLAR 114 (267)
Q Consensus 35 ~~~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g 114 (267)
...+++|++++||+|||+|+|++++++....... ...+...+++++|+++++.+++++++||||+|||||+++++.|
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~---~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g 125 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQND---NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCG 125 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC---CccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhC
Confidence 3557899999999999999999998765432211 1234667899999999999999999999999999999999999
Q ss_pred cCcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCC---cccccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCCC
Q 024444 115 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGG---ANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 191 (267)
Q Consensus 115 ~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~ 191 (267)
+++|.+.++|+++|++|+++|+++++.+++......... .....+..+..++|+.|+++|++|+++++.+.++++..
T Consensus 126 ~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~ 205 (296)
T PLN00184 126 RFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAI 205 (296)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCC
Confidence 999999999999999999999999999986433221111 11122335788999999999999999999876654432
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHHHHhh
Q 024444 192 RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFYDILN 266 (267)
Q Consensus 192 ~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~~ 266 (267)
..+.|+.||+++.+++++.+++||++||||||||||++.+ .|+++||||++|++|+++++++|+++.
T Consensus 206 -----~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~---~~~~~WVy~vgPilGa~laal~y~~l~ 272 (296)
T PLN00184 206 -----GELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG---CYKGIWIYIVAPTLGAIAGAWVYNTVR 272 (296)
T ss_pred -----CcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh---cccccchHHhHHHHHHHHHHHHHHHHh
Confidence 2478999999999999999999999999999999999975 689999999999999999999999873
No 3
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-49 Score=340.69 Aligned_cols=224 Identities=32% Similarity=0.471 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCc
Q 024444 38 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS 117 (267)
Q Consensus 38 ~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~ 117 (267)
++.|++++||+||++|++++++++......+.+....++..++++||+.+.+.+|+++++||||+|||||+++++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 35678899999999999999999887765544455667778999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcC------CCcccccC-CCccchhHHHHHHHHHHHHHHHHHhcCCCCC
Q 024444 118 LIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLG------GGANTVAS-GYNKGSALGAEIIGTFVLVYTVFSATDPKRS 190 (267)
Q Consensus 118 ~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 190 (267)
|++++.||++|++|+++|+.+++.++++.+...+ .+...+.+ ..+..++|+.|+++|++|+++|+++.|+++.
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~ 162 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 9999999999999999999999999987766554 12222222 2477899999999999999999998875554
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhc---C---CCCCCCcceEEeechhHHHHHHHHHHHH
Q 024444 191 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY---N---NDKAWDDHVRKKLCISEFCVCLLCFYDI 264 (267)
Q Consensus 191 ~~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~---~---~~~~~~~~wVy~v~P~~Ga~~a~~ly~~ 264 (267)
. +.+.|+.||+.+..++++.++.||.++|||||||||+.. + .+.++.|+||||++|++|+++++++||.
T Consensus 163 -~----~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~ 237 (241)
T COG0580 163 -N----AGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKL 237 (241)
T ss_pred -c----ccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHH
Confidence 1 348999999999999999999999999999999999954 2 1122369999999999999999999996
Q ss_pred hh
Q 024444 265 LN 266 (267)
Q Consensus 265 ~~ 266 (267)
+.
T Consensus 238 ~~ 239 (241)
T COG0580 238 LL 239 (241)
T ss_pred Hc
Confidence 64
No 4
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.6e-51 Score=352.06 Aligned_cols=224 Identities=25% Similarity=0.365 Sum_probs=196.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhcc
Q 024444 36 LWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK 115 (267)
Q Consensus 36 ~~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~ 115 (267)
.+++.|++++||+||++|++++++++.+...+.. ...++..+.++||+++++.+|+.+++||||+|||||+++++.||
T Consensus 28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g--~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~ 105 (316)
T KOG0224|consen 28 RNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGG--TGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR 105 (316)
T ss_pred HHHHHHHHHHHHHhHHHHHhhccceeEEEEeccC--CCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC
Confidence 4679999999999999999999998877655432 23345677889999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCCc--------------ccccCCCccchhHHHHHHHHHHHHHHH
Q 024444 116 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGA--------------NTVASGYNKGSALGAEIIGTFVLVYTV 181 (267)
Q Consensus 116 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~E~~~T~~l~~~i 181 (267)
++|+|+++|+++|++||++|++.+|.+|.+.+..++++. +.|.++.+.+++|+.|+++|.+|+.++
T Consensus 106 ~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l 185 (316)
T KOG0224|consen 106 LPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCL 185 (316)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhhe
Confidence 999999999999999999999999999998887776552 235678999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhc-----CCCC---CCCcceEEeechhH
Q 024444 182 FSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY-----NNDK---AWDDHVRKKLCISE 253 (267)
Q Consensus 182 l~~~~~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~-----~~~~---~~~~~wVy~v~P~~ 253 (267)
++++|+||..+ +.+.|+.+|+.+.++.++.+.+||..+|||||||||++. +... .-++.|++|++|++
T Consensus 186 ~aI~D~rN~~p----~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~ 261 (316)
T KOG0224|consen 186 FAITDKRNPIP----TGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLI 261 (316)
T ss_pred eEEecCCCCCC----cchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhh
Confidence 99999998443 468999999999999999999999999999999999994 1111 11578999999999
Q ss_pred HHHHHHHHHHHh
Q 024444 254 FCVCLLCFYDIL 265 (267)
Q Consensus 254 Ga~~a~~ly~~~ 265 (267)
|++++++.|+++
T Consensus 262 Gai~G~~iY~~~ 273 (316)
T KOG0224|consen 262 GAILGGWIYDFF 273 (316)
T ss_pred hhhhhhhhheee
Confidence 999999999875
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=6.1e-49 Score=350.19 Aligned_cols=223 Identities=25% Similarity=0.327 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccC
Q 024444 37 WSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKV 116 (267)
Q Consensus 37 ~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~ 116 (267)
++++|++++||+||++++|++++++......+ .+.+.+.+++++|+++++.+++++++||+|+|||||+++++.|++
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~---~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i 123 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVG---NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKF 123 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccC
Confidence 67889999999999999999998866432211 123456788999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCC-------------cccccCCCccchhHHHHHHHHHHHHHHHHH
Q 024444 117 SLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGG-------------ANTVASGYNKGSALGAEIIGTFVLVYTVFS 183 (267)
Q Consensus 117 ~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~E~~~T~~l~~~il~ 183 (267)
+|.+.+.|+++|++|+++|++++|.++++.+...+.+ ...+.++.+..++|+.|+++|++|+++++.
T Consensus 124 ~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila 203 (294)
T PTZ00016 124 PWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILA 203 (294)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998754432211 112234567789999999999999999999
Q ss_pred hcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcC---CCCCCC----cceEEeechhHHHH
Q 024444 184 ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN---NDKAWD----DHVRKKLCISEFCV 256 (267)
Q Consensus 184 ~~~~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~---~~~~~~----~~wVy~v~P~~Ga~ 256 (267)
+.|+|+... +...|+.||+++.+++++.+++||++||||||||||++.. +...|+ |+||||++|++|++
T Consensus 204 ~~d~~~~~~----~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~ 279 (294)
T PTZ00016 204 ITDPNNCPA----FNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAV 279 (294)
T ss_pred hccCccCCC----cCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHH
Confidence 999876532 2467999999999999999999999999999999999962 122343 79999999999999
Q ss_pred HHHHHHHHhh
Q 024444 257 CLLCFYDILN 266 (267)
Q Consensus 257 ~a~~ly~~~~ 266 (267)
+++++||++.
T Consensus 280 ~aally~~ll 289 (294)
T PTZ00016 280 LGMFLYDKFI 289 (294)
T ss_pred HHHHHHHHHh
Confidence 9999999874
No 6
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1e-49 Score=345.04 Aligned_cols=224 Identities=35% Similarity=0.485 Sum_probs=193.8
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCC---CCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHH
Q 024444 33 ELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSD---ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFG 109 (267)
Q Consensus 33 ~~~~~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla 109 (267)
|.++++++|++++||+||++++|+++++......... .....+...+++++|++++..+++++++||||+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 4567889999999999999999999886553322211 1122356788999999999999999999999999999999
Q ss_pred HHHhccCcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCCcccccCCCccchhHHHHHHHHHHHHHHHHHhcCCCC
Q 024444 110 LFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKR 189 (267)
Q Consensus 110 ~~l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~ 189 (267)
.++.|+++|++.+.|+++|++|+++|+.+++.++++.........+.+.++.+..++|+.|+++|++|+++++...|+|+
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~ 160 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKR 160 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccc
Confidence 99999999999999999999999999999999998764444445566778889999999999999999999999999888
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHH
Q 024444 190 SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFY 262 (267)
Q Consensus 190 ~~~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly 262 (267)
+.+. +.+.|+.||+++.++.+..++.||++|||||||||+++.+ .|+++||||++|++|+++++++|
T Consensus 161 ~~~~---~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 161 KFPL---GPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG---IWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSTS---SGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT---HHTTTTHHHHHHHHHHHHHHHHH
T ss_pred cccc---ccccceeEEEEEeecccccccccccccCchhhcCceeecc---cCCeEEEEEehHHHHHHHHHhhC
Confidence 7643 2478999999999999999999999999999999999986 49999999999999999999998
No 7
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=3.6e-48 Score=335.10 Aligned_cols=219 Identities=29% Similarity=0.469 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCcch
Q 024444 40 YRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLI 119 (267)
Q Consensus 40 ~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 119 (267)
+|++++||+||++++|++++++...+..+ ..+.+...+++++|+++++.+++++++||+|+|||||+++++.|+++|+
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~--~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP--ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC--CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHH
Confidence 58999999999999999998765322211 1123456789999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHhhchhh--hhcC-----CCc-ccccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCCC
Q 024444 120 RAVAYMVAQCLGAICGVGLVKAFMKHEY--NSLG-----GGA-NTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 191 (267)
Q Consensus 120 ~~~~yi~aQ~lGa~~ga~~~~~~~~~~~--~~~~-----~~~-~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~ 191 (267)
+.+.|+++|++|+++|+.+++.++++.. +..+ .+. ...+...+..++++.|+++|++|+++++...|+|+.
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~- 158 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDKRAP- 158 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCC-
Confidence 9999999999999999999998876421 1110 000 011234577899999999999999999999886542
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHHHHhhC
Q 024444 192 RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFYDILNK 267 (267)
Q Consensus 192 ~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~~~ 267 (267)
+.+.|+.||+++.++.+..+++||++||||||||||++.+ +.+|+++||||++|++|+++++++||++.+
T Consensus 159 -----~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g-~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~ 228 (231)
T PRK05420 159 -----AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG-GWALEQLWLFWVAPIVGAIIGGLIYRLLLE 228 (231)
T ss_pred -----CcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhC-CCCccceEEeehHHHHHHHHHHHHHHHHhc
Confidence 2478999999999999999999999999999999999975 234579999999999999999999999854
No 8
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=1.7e-47 Score=333.98 Aligned_cols=222 Identities=34% Similarity=0.447 Sum_probs=186.1
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccCC-CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHH
Q 024444 34 LKLWSFYRALIAEFVATLLFLYVSVATVIGH-KKQS-DACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 111 (267)
Q Consensus 34 ~~~~~~~~~~~~EflgT~~lv~~~~~~~~~~-~~~~-~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~ 111 (267)
...++.+|++++||++|++++|++++++... ...+ ......+.+.+++++|+.+++.+++++++||+|+|||+|++++
T Consensus 12 ~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~ 91 (250)
T PLN00166 12 SFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLA 91 (250)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHH
Confidence 3456778999999999999999999986642 1111 1111234567889999999999999999999999999999999
Q ss_pred HhccCcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCCcccccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCCC
Q 024444 112 LARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 191 (267)
Q Consensus 112 l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~ 191 (267)
+.|+++|.+.++|+++|++|+++|+.+.+.++++.. .......++.+..++++.|+++|++|+++++...+++|+.
T Consensus 92 l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~ 167 (250)
T PLN00166 92 IGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGES----VPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKG 167 (250)
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCC----CcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 999999999999999999999999999998875421 1112234566888999999999999999999876655532
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHHHHh
Q 024444 192 RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFYDIL 265 (267)
Q Consensus 192 ~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~ 265 (267)
.. +.+.|+.||+++.++++..+++||++||||||||||++.+ +|+++||||++|++|+++++++||.+
T Consensus 168 ~~---~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~---~~~~~wvywvgPi~Ga~~aa~~y~~l 235 (250)
T PLN00166 168 SL---GTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG---DFSQIWIYWVGPLVGGALAGLIYGDV 235 (250)
T ss_pred cc---ccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC---CCcccchhhHHHHHHHHHHHHHHHHH
Confidence 11 3478999999999999999999999999999999999975 69999999999999999999999877
No 9
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=3.1e-47 Score=333.08 Aligned_cols=224 Identities=29% Similarity=0.385 Sum_probs=189.3
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--CCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHH
Q 024444 32 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHKK--QSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFG 109 (267)
Q Consensus 32 ~~~~~~~~~~~~~~EflgT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla 109 (267)
++...++++|++++||+|||+++|+++++...... .++...+.+.+.+++++|+++++.+++++++||+|+|||||++
T Consensus 14 ~~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~ 93 (256)
T PLN00167 14 QQSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFG 93 (256)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHH
Confidence 34456778999999999999999999998764321 1111223457789999999999999999999999999999999
Q ss_pred HHHhccCcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCCcccccCCCccchhHHHHHHHHHHHHHHHHHhcCCCC
Q 024444 110 LFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKR 189 (267)
Q Consensus 110 ~~l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~ 189 (267)
+++.|+++|++.+.|+++|++|+++|+.+++.++++... +.+...++.+..++++.|+++|++|+++++...|+|+
T Consensus 94 ~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~ 169 (256)
T PLN00167 94 MAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHV----PTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRR 169 (256)
T ss_pred HHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccc----cccccCcccchHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999988764211 1122234556778999999999999999999888766
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHHHHhh
Q 024444 190 SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFYDILN 266 (267)
Q Consensus 190 ~~~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~~ 266 (267)
... +...|+.||+++.++.++.+++||++||||||||||++.+ .|+++|+||++|++|+++++++|+++.
T Consensus 170 ~~~----~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~---~~~~~wvywvgP~~Ga~l~a~~y~~l~ 239 (256)
T PLN00167 170 GLL----GAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG---SFKNQAVYWVGPLLGGAVAGLLYDNVV 239 (256)
T ss_pred cCC----CCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc---CccCcEEEeHHHHHHHHHHHHHHHHHh
Confidence 421 3478999999999999999999999999999999999964 589999999999999999999999875
No 10
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=2.3e-47 Score=337.29 Aligned_cols=216 Identities=24% Similarity=0.381 Sum_probs=183.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhcc
Q 024444 36 LWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK 115 (267)
Q Consensus 36 ~~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~ 115 (267)
.++++|++++||+|||+|+|++++++....... ...+.+.+++++|+++++.+++++++||||+|||||+++++.|+
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~---~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~ 114 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYG---GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR 114 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC---CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC
Confidence 356889999999999999999998766433211 12345678889999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCCcccccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 024444 116 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSH 195 (267)
Q Consensus 116 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~ 195 (267)
++|.+.++|+++|++|+++|+++++.+++... .+.....++.+..++++.|+++|++|+++++.+.++++..
T Consensus 115 ~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~----~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~---- 186 (283)
T PLN00182 115 FPWYQVPLYIGAQLTGSLLASLTLRLMFNVTP----EAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAV---- 186 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----cceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccC----
Confidence 99999999999999999999999999885321 1112223445788999999999999999999875554332
Q ss_pred CCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHHHHhh
Q 024444 196 VPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFYDILN 266 (267)
Q Consensus 196 ~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~~ 266 (267)
+.+.|+.+|+++.++.++.+++||+++||||+|||+++.+ .|+++||||++|++|+++++++|+++.
T Consensus 187 -~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~---~~~~~wvY~vap~lGA~lgally~~l~ 253 (283)
T PLN00182 187 -GELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG---RYKGIWVYIVGPFVGIIAGGFVYNLIR 253 (283)
T ss_pred -CcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc---cccceeHHHHHHHHHHHHHHHHHHHHh
Confidence 2357999999999999999999999999999999999864 699999999999999999999999873
No 11
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=2.8e-47 Score=333.53 Aligned_cols=224 Identities=33% Similarity=0.462 Sum_probs=186.7
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-C-CCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHH
Q 024444 32 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHKK-Q-SDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFG 109 (267)
Q Consensus 32 ~~~~~~~~~~~~~~EflgT~~lv~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla 109 (267)
+|...++.+|++++||++|++|+|+++++...... . ++.....+.+.+++++|+++++.+++++++||+|+|||+|++
T Consensus 12 ~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~ 91 (252)
T PLN00027 12 GEASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFG 91 (252)
T ss_pred HhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHH
Confidence 34445678899999999999999999988653211 1 111112346678999999999999999999999999999999
Q ss_pred HHHhccCcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCCcccccCCCccchhHHHHHHHHHHHHHHHHHhc-CCC
Q 024444 110 LFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSAT-DPK 188 (267)
Q Consensus 110 ~~l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~-~~~ 188 (267)
+++.|+++|.+.++|+++|++|+++|+.+++.+.++.. .+.....++.+..++++.|+++|++|+++++... |+|
T Consensus 92 ~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~ 167 (252)
T PLN00027 92 AFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE----TSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPK 167 (252)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc----cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999987765421 1223344577889999999999999999999875 444
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHHHHhh
Q 024444 189 RSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFYDILN 266 (267)
Q Consensus 189 ~~~~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~~ 266 (267)
+... +.+.|+.+|+.+..++++.+++||++||||||||||++.+ +|+++||||++|++|+++++++||++.
T Consensus 168 ~~~~----~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~---~~~~~wvy~vgP~~Ga~laa~~y~~l~ 238 (252)
T PLN00027 168 KGDL----GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---TWTNHWVYWAGPLIGGGIAGLVYELIF 238 (252)
T ss_pred cCCc----cchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh---cchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 3211 3478999999999999999999999999999999999975 699999999999999999999999984
No 12
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=5.6e-47 Score=336.13 Aligned_cols=215 Identities=27% Similarity=0.377 Sum_probs=182.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhcc
Q 024444 36 LWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK 115 (267)
Q Consensus 36 ~~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~ 115 (267)
..+++|++++||+|||+|+|+++++........ ...+.+.+++++|+++++.+++++++||||+|||||+++++.++
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~---~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~ 143 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKYD---GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH 143 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccccC---CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC
Confidence 446889999999999999999987644322111 11245667899999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCCcccccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 024444 116 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSH 195 (267)
Q Consensus 116 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~ 195 (267)
++|.+.+.|+++|++|+++|+++++.++++... .+.+ .++.+..++++.|+++|++|+++++.+.+++++.
T Consensus 144 ~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~---~g~t--~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~---- 214 (298)
T PLN00026 144 FPWKHVPAYIAAQVSASICASFALKGVFHPFMS---GGVT--VPSVSTGQAFALEFIITFNLLFVVTAVATDTRAV---- 214 (298)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---Ccee--eecccHHHHHHHHHHHHHHHHHhheeeecCCCCc----
Confidence 999999999999999999999999999875321 2222 2466889999999999999999999765444432
Q ss_pred CCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHHHHhh
Q 024444 196 VPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFYDILN 266 (267)
Q Consensus 196 ~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~~ 266 (267)
..+.++.+|+++.+..+..+++||++|||||||||+++.+ +|+++||||++|++|+++++++|++++
T Consensus 215 -~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~---~~~~~wVy~vaPilGAilga~ly~~~~ 281 (298)
T PLN00026 215 -GELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG---NYRAIWIYLVAPTLGALAGAGTYTAVK 281 (298)
T ss_pred -CCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC---CchheeHHHHHHHHHHHHHHHHHHHHh
Confidence 2357899999999999999999999999999999999864 799999999999999999999999874
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=1.6e-45 Score=324.53 Aligned_cols=215 Identities=25% Similarity=0.337 Sum_probs=183.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhcc
Q 024444 36 LWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK 115 (267)
Q Consensus 36 ~~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~ 115 (267)
..+.+|++++||++||+++|++++++...+... ...+...+++++|+++++.+++++++||+|+|||||+++++.|+
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~---~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~ 117 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSG---GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGH 117 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccC---CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcC
Confidence 456789999999999999999998766433221 12345668889999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCCcccccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 024444 116 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSH 195 (267)
Q Consensus 116 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~ 195 (267)
++|.+.++|+++|++|+++|+.+++.+++... +.....+..+..++++.|+++|++|+++++...+++++.
T Consensus 118 i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-----~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~---- 188 (274)
T PLN00183 118 FPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-----DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSL---- 188 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCC----
Confidence 99999999999999999999999988886421 111223444668999999999999999999887765432
Q ss_pred CCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHHHHhh
Q 024444 196 VPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFYDILN 266 (267)
Q Consensus 196 ~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~~ 266 (267)
+.+.|+.+|+.+.+.+++.+++||++|||||+|+|+++. .+|+++|+||++|++|+++++++||+++
T Consensus 189 -~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~---~~~~~~wvy~vapilGailaa~l~~~l~ 255 (274)
T PLN00183 189 -GHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS---WDFKDIWIYITAPTIGAVAGALMFHLLR 255 (274)
T ss_pred -CCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC---CChhheehHHHHHHHHHHHHHHHHHHHh
Confidence 235789999999999999999999999999999999986 3699999999999999999999999985
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=1.2e-44 Score=313.47 Aligned_cols=220 Identities=39% Similarity=0.576 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCcchh
Q 024444 41 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIR 120 (267)
Q Consensus 41 ~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 120 (267)
|++++||++|++++++++++....+...+ ...+...+++++|+.+.+.+++++++||+|+|||+|+++++.|+++|++
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~--~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~ 78 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGG--ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIR 78 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCC--CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHH
Confidence 56889999999999999998765443221 2234567899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCCc--------ccccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 024444 121 AVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGA--------NTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSAR 192 (267)
Q Consensus 121 ~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~ 192 (267)
.++|+++|++|+++|+.+.+.++++.++....+. +.+.++.+..++++.|+++|++|+++++...++++...
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~ 158 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPP 158 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCC
Confidence 9999999999999999999999987665443221 23556778899999999999999999999887665421
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHHHHh
Q 024444 193 DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFYDIL 265 (267)
Q Consensus 193 ~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~ 265 (267)
. +...|+.+|+++.++.+..+++||+++||||||+|+++.+....|+++|+||++|++|+++++++||++
T Consensus 159 ~---~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 159 P---GGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred C---CCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 1 346899999999999999999999999999999999997522369999999999999999999999974
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=1.6e-42 Score=297.83 Aligned_cols=214 Identities=38% Similarity=0.612 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCC-CC-CCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCcchhHH
Q 024444 45 AEFVATLLFLYVSVATVIGHKKQSD-AC-GGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAV 122 (267)
Q Consensus 45 ~EflgT~~lv~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 122 (267)
+||++|++++++++++.......+. +. .+.+...+++++|+.+...+++++++||+|+|||+|+++++.|+++|++.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 5999999999999988765322210 11 112466789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHhhchhhhhcCCCcccccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhH
Q 024444 123 AYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPL 202 (267)
Q Consensus 123 ~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~l~~~ 202 (267)
.|+++|++|+++|+.+++.++++.+...........++.+..++++.|+++|++|+++++...+++++... ....|+
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~---~~~~~~ 157 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPR---GGFAPL 157 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCC---CccHHH
Confidence 99999999999999999998886542111111223455688999999999999999999988876554322 237899
Q ss_pred HHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHHHHHHHHH
Q 024444 203 PIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFCVCLLCFY 262 (267)
Q Consensus 203 ~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga~~a~~ly 262 (267)
.+|+++.++.+..+++||+++||||+|+|+++.+ ..+|+++||||++|++|+++++++|
T Consensus 158 ~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~-~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 158 AIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAG-LAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHHHhCCCCcccccCchhhhhHHHHhc-cccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999864 2479999999999999999999876
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.61 E-value=3.2e-15 Score=132.67 Aligned_cols=98 Identities=24% Similarity=0.323 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCc
Q 024444 38 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS 117 (267)
Q Consensus 38 ~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~ 117 (267)
+.++.++.|+++|++|++++++.....+.. . . ..++++|+.+++.+++.+++||+|+|||+|+++++.++ .
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~----~---~-~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~ 227 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSRAV----G---E-LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-R 227 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheeccccC----C---c-chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-c
Confidence 457899999999999999888754332111 1 1 25788999999999999999999999999999999865 5
Q ss_pred chhHHHHHHHHhHHHHHHHHHHHHhhc
Q 024444 118 LIRAVAYMVAQCLGAICGVGLVKAFMK 144 (267)
Q Consensus 118 ~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 144 (267)
|.+.|+||++|++|+++|+++.+.+..
T Consensus 228 ~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 228 YKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred ccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999988764
No 17
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.57 E-value=1e-14 Score=126.32 Aligned_cols=99 Identities=23% Similarity=0.225 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccC
Q 024444 37 WSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKV 116 (267)
Q Consensus 37 ~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~ 116 (267)
.+.+|.++.|+++|+++++.++......+.. ......++.+|+.+....+..+++||+|+|||++++.++.++.
T Consensus 127 ~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~------~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~ 200 (228)
T cd00333 127 VSNGNAFFVEFIGTFILVLVVFATTDDPNGP------PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGL 200 (228)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccccccC------CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhcc
Confidence 4578999999999999999988765432211 0122467889999999999999999999999999999999987
Q ss_pred --cchhHHHHHHHHhHHHHHHHHHHHH
Q 024444 117 --SLIRAVAYMVAQCLGAICGVGLVKA 141 (267)
Q Consensus 117 --~~~~~~~yi~aQ~lGa~~ga~~~~~ 141 (267)
+|.+.|+||++|++|+++|+.+.+.
T Consensus 201 ~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 201 ARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred ccccceeehhhhHHHHHHHHHHHHHHh
Confidence 7999999999999999999987653
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.55 E-value=1.3e-14 Score=129.50 Aligned_cols=98 Identities=28% Similarity=0.382 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCc
Q 024444 38 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS 117 (267)
Q Consensus 38 ~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~ 117 (267)
+.++.++.||++|++|+++++++....+.. +. ..++++|+.+++.+++.++.||+|+|||+|+++++.++ +
T Consensus 185 s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~-------~~-~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~ 255 (298)
T PLN00026 185 STGQAFALEFIITFNLLFVVTAVATDTRAV-------GE-LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-N 255 (298)
T ss_pred cHHHHHHHHHHHHHHHHHhheeeecCCCCc-------CC-ccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC-C
Confidence 567899999999999999887543221111 01 24588999999999999999999999999999999986 8
Q ss_pred chhHHHHHHHHhHHHHHHHHHHHHhhc
Q 024444 118 LIRAVAYMVAQCLGAICGVGLVKAFMK 144 (267)
Q Consensus 118 ~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 144 (267)
|.+.|+||++|++|+++|+++.+.+.-
T Consensus 256 ~~~~wVy~vaPilGAilga~ly~~~~~ 282 (298)
T PLN00026 256 YRAIWIYLVAPTLGALAGAGTYTAVKL 282 (298)
T ss_pred chheeHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999998777643
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.54 E-value=2.1e-14 Score=127.07 Aligned_cols=99 Identities=22% Similarity=0.348 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCcc
Q 024444 39 FYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL 118 (267)
Q Consensus 39 ~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 118 (267)
.++.++.|+++|+++++.+++.....+.. +. ..++.+|+.+++.+++.+++||+|+|||+|++.++.+ .+|
T Consensus 160 ~~~~~~~E~v~T~iLv~~i~~~~~~~~~~-------~~-~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~ 230 (274)
T PLN00183 160 CSSAFWVEFIATFIVMFLAASLTSQPQSL-------GH-LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDF 230 (274)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeccccCC-------CC-ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CCh
Confidence 46899999999999999887765432111 01 2457788889999999999999999999999999987 489
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHhhchh
Q 024444 119 IRAVAYMVAQCLGAICGVGLVKAFMKHE 146 (267)
Q Consensus 119 ~~~~~yi~aQ~lGa~~ga~~~~~~~~~~ 146 (267)
.+.|+||++|++|+++++.+.+.++.+.
T Consensus 231 ~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 231 KDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred hheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999887644
No 20
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.48 E-value=1.1e-13 Score=119.06 Aligned_cols=96 Identities=24% Similarity=0.256 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhc-c
Q 024444 37 WSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLAR-K 115 (267)
Q Consensus 37 ~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g-~ 115 (267)
.+.++.++.|+++|+++++..+.+....+... . ....++.+|+.+...++..+++||+|+|||++++.++.+ .
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~----~--~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~ 192 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPRNRVP----R--GGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGL 192 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCCCCCC----C--CccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcc
Confidence 35689999999999999998887654322111 0 114678899999999999999999999999999999976 5
Q ss_pred CcchhHHHHHHHHhHHHHHHHHH
Q 024444 116 VSLIRAVAYMVAQCLGAICGVGL 138 (267)
Q Consensus 116 ~~~~~~~~yi~aQ~lGa~~ga~~ 138 (267)
.+|.+.|+|+++|++|+++++.+
T Consensus 193 ~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 193 AGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred ccccceeHHHHHHHHHHHHHHHh
Confidence 78999999999999999999875
No 21
>PLN00184 aquaporin NIP1; Provisional
Probab=99.45 E-value=1.4e-13 Score=122.93 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=81.5
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCch--hHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCC
Q 024444 160 GYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLA--PLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN 237 (267)
Q Consensus 160 ~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~l~--~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~ 237 (267)
+.+..+.++.|+++|++|+++.+.....+...... ..+. ++..|+++.+.+++.+++||+.+||||+|++++..
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~--~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g-- 125 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNV--VTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCG-- 125 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCc--cccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhC--
Confidence 34567899999999999999988654221111111 1233 44559999999999999999999999999999964
Q ss_pred CCCCCcceEEeechhHHHHHHHHHHHHhh
Q 024444 238 DKAWDDHVRKKLCISEFCVCLLCFYDILN 266 (267)
Q Consensus 238 ~~~~~~~wVy~v~P~~Ga~~a~~ly~~~~ 266 (267)
...|...|+||++|++|+++|+++++.++
T Consensus 126 ~~~~~~~~~YiiaQllGA~lga~~~~~l~ 154 (296)
T PLN00184 126 RFPLKQVPAYVISQVIGSTLAAATLRLLF 154 (296)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35799999999999999999999888765
No 22
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.41 E-value=1.7e-13 Score=118.36 Aligned_cols=100 Identities=21% Similarity=0.271 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccC
Q 024444 37 WSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKV 116 (267)
Q Consensus 37 ~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~ 116 (267)
.+..|.++.|++.||++|+..++.....+.. ...++.+|+++.+.+++.+++||+++|||+|++.++..+
T Consensus 129 ~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~- 198 (238)
T KOG0223|consen 129 LSTGQGLVIEIILTFILVFTVFATATDPRRS---------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG- 198 (238)
T ss_pred CCcchhHHHHHHHHHHHhheeEEEeecCCCc---------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc-
Confidence 3457899999999999999887744433322 257889999999999999999999999999999999887
Q ss_pred cchhHHHHHHHHhHHHHHHHHHHHHhhchh
Q 024444 117 SLIRAVAYMVAQCLGAICGVGLVKAFMKHE 146 (267)
Q Consensus 117 ~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~ 146 (267)
+|...|+||++|++|+++++++.+.++.+.
T Consensus 199 ~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 199 SWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred CCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 499999999999999999999999887654
No 23
>PLN00167 aquaporin TIP5; Provisional
Probab=99.33 E-value=2.6e-12 Score=112.87 Aligned_cols=105 Identities=21% Similarity=0.208 Sum_probs=84.5
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHhcCCCCCC-C----CCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHh
Q 024444 160 GYNKGSALGAEIIGTFVLVYTVFSATDPKRSA-R----DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI 234 (267)
Q Consensus 160 ~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~-~----~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~ 234 (267)
..+..+.++.|+++|++|+++.+....+++.. + .+......++.+|+.+.+.+++.+++||+.+|||+++++.+.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 34567899999999999999988765432210 0 010123578999999999999999999999999999999996
Q ss_pred cCCCCCCCcceEEeechhHHHHHHHHHHHHhh
Q 024444 235 YNNDKAWDDHVRKKLCISEFCVCLLCFYDILN 266 (267)
Q Consensus 235 ~~~~~~~~~~wVy~v~P~~Ga~~a~~ly~~~~ 266 (267)
. ...|...|+||+++++|+++++.+++.++
T Consensus 98 g--~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 127 (256)
T PLN00167 98 G--HISVPTAMFYWISQMLASVMACLFLKVTT 127 (256)
T ss_pred C--CCcHhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 3 35699999999999999999999887653
No 24
>PLN00166 aquaporin TIP2; Provisional
Probab=99.33 E-value=9.8e-12 Score=108.92 Aligned_cols=103 Identities=22% Similarity=0.251 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCc
Q 024444 38 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS 117 (267)
Q Consensus 38 ~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~ 117 (267)
+..|.++.|+++|++|++..+......+... .....++.+|+.+....+..++.||+.+|||+++++++..+ .
T Consensus 138 ~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~------~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~-~ 210 (250)
T PLN00166 138 GAIEGVVMEIVVTFALVYTVYATAADPKKGS------LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-D 210 (250)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcccccccc------cccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC-C
Confidence 5679999999999999998877543222110 01135788888899999999999999999999999999865 6
Q ss_pred chhHHHHHHHHhHHHHHHHHHHHHhhchhh
Q 024444 118 LIRAVAYMVAQCLGAICGVGLVKAFMKHEY 147 (267)
Q Consensus 118 ~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~ 147 (267)
|...|+||++|++|+++++++.+.++.+.+
T Consensus 211 ~~~~wvywvgPi~Ga~~aa~~y~~l~~~~~ 240 (250)
T PLN00166 211 FSQIWIYWVGPLVGGALAGLIYGDVFIGSY 240 (250)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHHhcccC
Confidence 889999999999999999999877765443
No 25
>PRK05420 aquaporin Z; Provisional
Probab=99.28 E-value=1.7e-11 Score=106.33 Aligned_cols=99 Identities=24% Similarity=0.301 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhcc-C
Q 024444 38 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK-V 116 (267)
Q Consensus 38 ~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~-~ 116 (267)
+..+.++.|+++|++|++..+......+ . . + ..++.+|+.+....+..++.||+.+|||+++++.+..+ .
T Consensus 130 ~~~~~~~~E~v~T~iLv~~i~~~~~~~~-~----~--~--~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~ 200 (231)
T PRK05420 130 SLLAALVCEVVLTAFFLLVILGATDKRA-P----A--G--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGW 200 (231)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCC-C----C--c--chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCC
Confidence 5689999999999999998887644221 1 1 1 35688888899888999999999999999999998743 3
Q ss_pred cchhHHHHHHHHhHHHHHHHHHHHHhhch
Q 024444 117 SLIRAVAYMVAQCLGAICGVGLVKAFMKH 145 (267)
Q Consensus 117 ~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 145 (267)
++...|+||++|++|+++++.+.+.++.+
T Consensus 201 ~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 201 ALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred CccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 45688999999999999999988777654
No 26
>PLN00027 aquaporin TIP; Provisional
Probab=99.28 E-value=3.7e-11 Score=105.51 Aligned_cols=101 Identities=20% Similarity=0.252 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCc
Q 024444 38 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS 117 (267)
Q Consensus 38 ~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~ 117 (267)
+.++.++.|+++||+|++..+......+... . ....++.+|+.+....+..++.||+.+|||+++++.+... .
T Consensus 140 ~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~-----~-~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~-~ 212 (252)
T PLN00027 140 GVWNAFVFEIVMTFGLVYTVYATAVDPKKGD-----L-GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-T 212 (252)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhccccccCC-----c-cchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh-c
Confidence 4679999999999999998876543222110 0 1145778888888888999999999999999999999875 6
Q ss_pred chhHHHHHHHHhHHHHHHHHHHHHhhch
Q 024444 118 LIRAVAYMVAQCLGAICGVGLVKAFMKH 145 (267)
Q Consensus 118 ~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 145 (267)
|...|+||++|++|+++++.+.+.++.+
T Consensus 213 ~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 213 WTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8899999999999999999998887643
No 27
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.21 E-value=4.5e-11 Score=107.08 Aligned_cols=102 Identities=24% Similarity=0.280 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhc--
Q 024444 37 WSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLAR-- 114 (267)
Q Consensus 37 ~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g-- 114 (267)
.+..+.++.|+++|++|++..+......+... .+ ..++.+|+.+..+.+..++.||+.+|||+++++.+..
T Consensus 181 ~s~~~a~~~E~i~T~iLv~~ila~~d~~~~~~-----~~--~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~ 253 (294)
T PTZ00016 181 EGNFYAIFSELILTAILLLVILAITDPNNCPA-----FN--YLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAI 253 (294)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhccCccCCC-----cC--cccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHH
Confidence 35689999999999999998887644322110 01 2467788888888888999999999999999999863
Q ss_pred ---cCcch----hHHHHHHHHhHHHHHHHHHHHHhhch
Q 024444 115 ---KVSLI----RAVAYMVAQCLGAICGVGLVKAFMKH 145 (267)
Q Consensus 115 ---~~~~~----~~~~yi~aQ~lGa~~ga~~~~~~~~~ 145 (267)
+..|. ..|+||+++++|+++|+++.+.+.++
T Consensus 254 ~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~ 291 (294)
T PTZ00016 254 LWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPP 291 (294)
T ss_pred hccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCC
Confidence 33454 48999999999999999998877654
No 28
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.12 E-value=3.5e-10 Score=97.79 Aligned_cols=95 Identities=26% Similarity=0.303 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCc
Q 024444 38 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS 117 (267)
Q Consensus 38 ~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~ 117 (267)
+..+.++.|+++|+++++.........+.... +. ..++.+|+.+....+..+..||+.+|||++++..+....
T Consensus 133 s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~~-----~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~- 205 (227)
T PF00230_consen 133 SLGQAFFSEFIGTFILVLVILAVADDKRKFPL-----GP-LAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI- 205 (227)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTSTTSSSTS-----SG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-
T ss_pred hhhhhhhhhhhhhhHHHhhhhhhccccccccc-----cc-ccceeEEEEEeecccccccccccccCchhhcCceeeccc-
Confidence 46789999999999999987776554332211 11 256778888888888889999999999999999988764
Q ss_pred chhHHHHHHHHhHHHHHHHHHH
Q 024444 118 LIRAVAYMVAQCLGAICGVGLV 139 (267)
Q Consensus 118 ~~~~~~yi~aQ~lGa~~ga~~~ 139 (267)
|...|+||+++++|+++|+++.
T Consensus 206 ~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 206 WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HTTTTHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEehHHHHHHHHHhhC
Confidence 9999999999999999998763
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.04 E-value=9.5e-10 Score=95.04 Aligned_cols=100 Identities=23% Similarity=0.219 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHh---
Q 024444 37 WSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLA--- 113 (267)
Q Consensus 37 ~~~~~~~~~EflgT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~--- 113 (267)
++..+.++.|+++||+|++...+.....+. +.-..++.+|+.++....+.++.||-.+|||+++++.+.
T Consensus 133 ~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~--------~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~ 204 (241)
T COG0580 133 YSLGQAFLIEFVGTFVLVLGILALTDDGNA--------NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSL 204 (241)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhccCcc--------cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHh
Confidence 367899999999999999988775431111 111467888999999999999999999999999999984
Q ss_pred -ccCcc----hhHHHHHHHHhHHHHHHHHHHHHhhc
Q 024444 114 -RKVSL----IRAVAYMVAQCLGAICGVGLVKAFMK 144 (267)
Q Consensus 114 -g~~~~----~~~~~yi~aQ~lGa~~ga~~~~~~~~ 144 (267)
+..+. ...|+||++|++|+++|+++.+.++.
T Consensus 205 ~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 205 AGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred cCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 31222 47999999999999999999887653
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=98.33 E-value=6e-07 Score=79.11 Aligned_cols=97 Identities=23% Similarity=0.188 Sum_probs=73.6
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-CchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCC
Q 024444 162 NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVP-VLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKA 240 (267)
Q Consensus 162 ~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~-~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~ 240 (267)
...+.++.||++|++|++.=+++.-+..-.+..+.. .-..+..|+.+.+.++.++..||+-+|||.+|+..++.. -.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~--~p 107 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR--LP 107 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC--CC
Confidence 456789999999999998655432222111110001 123567888999999999999999999999999999853 67
Q ss_pred CCcceEEeechhHHHHHHHH
Q 024444 241 WDDHVRKKLCISEFCVCLLC 260 (267)
Q Consensus 241 ~~~~wVy~v~P~~Ga~~a~~ 260 (267)
|..+.+|.++..+||.+++.
T Consensus 108 ~~k~p~Y~~aQ~iGAF~gaa 127 (316)
T KOG0224|consen 108 WKKFPVYVLAQFIGAFLGAA 127 (316)
T ss_pred hhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999776
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=94.75 E-value=0.63 Score=41.13 Aligned_cols=182 Identities=15% Similarity=0.126 Sum_probs=97.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCcchhHHHHHHHHhHHHHHHHHHHHHhhc-hhhhhcCC
Q 024444 74 VGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMK-HEYNSLGG 152 (267)
Q Consensus 74 ~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~-~~~~~~~~ 152 (267)
...+..++++++.+...+++-+..--+ |--........++++|++.+--|+--.+|=++|++++..++. ........
T Consensus 62 ~~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~ 139 (265)
T COG2116 62 LAKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTAN 139 (265)
T ss_pred hHHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 355666777777776666665443211 322233335678899999988888888888888888766651 11001111
Q ss_pred Ccc--------cccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccc
Q 024444 153 GAN--------TVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGIN 224 (267)
Q Consensus 153 ~~~--------~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~N 224 (267)
+.. .-..+.+..+.|.--.+|.++.++.++....-|... -+-+.+ ...+..+..+.++=...|
T Consensus 140 ~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~k~~~-------~K~~~m--~~pv~~Fv~~GfeH~VAN 210 (265)
T COG2116 140 GQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSAKDGA-------AKIFAI--ILPVMLFVASGFEHSVAN 210 (265)
T ss_pred chhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcccchh-------hHHHHH--HHHHHHHHHcCCceeeeh
Confidence 111 011234557888888999999999888654433221 122333 333333344445545555
Q ss_pred hhhhHHHHHhcCCCCCCCc-ceEEe----echhH-HHHHHHHHHHHhhC
Q 024444 225 PARSFGAAVIYNNDKAWDD-HVRKK----LCISE-FCVCLLCFYDILNK 267 (267)
Q Consensus 225 PAr~lg~~i~~~~~~~~~~-~wVy~----v~P~~-Ga~~a~~ly~~~~~ 267 (267)
=..- .+..+..+...|.. .|--+ +|.++ |+++-++.|.++|+
T Consensus 211 m~~i-~~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~ 258 (265)
T COG2116 211 MFMI-PWAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYR 258 (265)
T ss_pred HHHH-HHHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhcc
Confidence 2221 13333333344544 22111 23333 45667788888765
No 32
>PRK10805 formate transporter; Provisional
Probab=91.65 E-value=8.7 Score=34.47 Aligned_cols=106 Identities=14% Similarity=0.157 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhcc-CCCccChHHHHHHHHhccCcchhHHHHHHHHhHHHHHHHHHHHHhhc--hhhhhcCC
Q 024444 76 LLGIAWAFGGMIFVLVYCTAGI-SGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMK--HEYNSLGG 152 (267)
Q Consensus 76 ~~~~~l~~g~~v~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~--~~~~~~~~ 152 (267)
.+..++.+.+.+...++.-... || |-..+++ .+.||.++++..-.|.-=++|=++|++++..+.. ........
T Consensus 68 ~ll~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~ 143 (285)
T PRK10805 68 KLVGGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANG 143 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCcc
Confidence 3444556666555555554443 44 5555443 5778889988875555555555555555433221 11100000
Q ss_pred C-------cccccCCCccchhHHHHHHHHHHHHHHHHHhc
Q 024444 153 G-------ANTVASGYNKGSALGAEIIGTFVLVYTVFSAT 185 (267)
Q Consensus 153 ~-------~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~ 185 (267)
. ......+.+..+.|+-=.+|.++.++.++...
T Consensus 144 ~~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~~ 183 (285)
T PRK10805 144 QWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSY 183 (285)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00112245678889999999999999887544
No 33
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=90.48 E-value=9.6 Score=33.45 Aligned_cols=113 Identities=14% Similarity=0.102 Sum_probs=65.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCcchhHHHHHHHHhHHHHHHHHHHHHhhchhhhhcCCC
Q 024444 74 VGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGG 153 (267)
Q Consensus 74 ~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~ 153 (267)
...+..++.+++.+...++.-+..--+ |-......++.|+.+|++.+--|.-=.+|=++|++++..+....-...+.+
T Consensus 55 ~~~l~~g~~F~~Gl~lIv~~g~eLfTg--n~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~ 132 (250)
T PF01226_consen 55 LAKLVGGLVFPIGLVLIVFLGGELFTG--NMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSP 132 (250)
T ss_dssp HHHHHHHHHHTHHHHHHHHHT---TTT--TCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccH
Confidence 344555666666666666665443222 556555567778899988877776666666666666555443111000001
Q ss_pred --------cccccCCCccchhHHHHHHHHHHHHHHHHHhcCCC
Q 024444 154 --------ANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPK 188 (267)
Q Consensus 154 --------~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~ 188 (267)
......+.+.++.|+-=.+|.++.++.++.....|
T Consensus 133 ~~~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~~~~ 175 (250)
T PF01226_consen 133 AMGEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAFAAK 175 (250)
T ss_dssp HHHHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHCT-S
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 01112345678899999999999999988765433
No 34
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=74.73 E-value=57 Score=28.34 Aligned_cols=106 Identities=15% Similarity=0.097 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhcc-CCCccChHHHHHHHHhccCcchhHHHHHHHHhHHHHHHHHHHHHhhch--hh-hhc-
Q 024444 76 LLGIAWAFGGMIFVLVYCTAGI-SGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH--EY-NSL- 150 (267)
Q Consensus 76 ~~~~~l~~g~~v~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~--~~-~~~- 150 (267)
.+..++.+.+.+...++.-+.. || |-......++.||.+|.+..-.|.--.+|=++|+.++..+... .. +..
T Consensus 43 ~~l~~~~F~~gl~~Iv~~g~eLfTg---n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~ 119 (239)
T TIGR00790 43 KLVGGATFPIGLILVVIAGSDLFTG---NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANG 119 (239)
T ss_pred HHHHHHHHHHHHheeeeeCcccccc---chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcc
Confidence 3444555555444444433332 22 3333334466788898888877777667777777666554421 10 000
Q ss_pred C-----CCcccccCCCccchhHHHHHHHHHHHHHHHHHh
Q 024444 151 G-----GGANTVASGYNKGSALGAEIIGTFVLVYTVFSA 184 (267)
Q Consensus 151 ~-----~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~ 184 (267)
+ ........+.+..+.|+.=++|.++..+.++..
T Consensus 120 ~~~~~~~~~a~~K~~~~~~~~f~~gilcn~lV~lav~~~ 158 (239)
T TIGR00790 120 PWGVGSLAIAEHKAHHTFVEAFFLGILCNWLVCLAVWMS 158 (239)
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000111234567888888899999998888753
No 35
>PRK11562 nitrite transporter NirC; Provisional
Probab=68.20 E-value=88 Score=27.81 Aligned_cols=106 Identities=11% Similarity=0.099 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-CCCccChHHHHHHHHhccCcchhHHHHHHHHhHHHHHHHHHHHHhhchh---hhhcCC
Q 024444 77 LGIAWAFGGMIFVLVYCTAGI-SGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHE---YNSLGG 152 (267)
Q Consensus 77 ~~~~l~~g~~v~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~---~~~~~~ 152 (267)
+..+..+++.+.+.++..+.. +| |=.......+.|+.+|++.+-.|.-=.+|=++|++++..+.... .... .
T Consensus 59 li~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~-~ 134 (268)
T PRK11562 59 LVMGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPV-D 134 (268)
T ss_pred HHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-h
Confidence 334556666555555554432 22 33333344667888988888777666677777666655543210 1100 0
Q ss_pred Cc-----ccccCCCccchhHHHHHHHHHHHHHHHHHhcC
Q 024444 153 GA-----NTVASGYNKGSALGAEIIGTFVLVYTVFSATD 186 (267)
Q Consensus 153 ~~-----~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~ 186 (267)
.. .....+.+..+.|+-=.+|.++.++.++....
T Consensus 135 ~~~~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~~~ 173 (268)
T PRK11562 135 TSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMAIR 173 (268)
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 01112346678899999999999998876543
No 36
>COG0730 Predicted permeases [General function prediction only]
Probab=45.87 E-value=2e+02 Score=24.86 Aligned_cols=30 Identities=20% Similarity=0.238 Sum_probs=24.3
Q ss_pred hccCcchhHHHHHHHHhHHHHHHHHHHHHh
Q 024444 113 ARKVSLIRAVAYMVAQCLGAICGVGLVKAF 142 (267)
Q Consensus 113 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~ 142 (267)
.++.+|+........=++|+.+|+.+...+
T Consensus 68 ~~~v~~~~~~~l~~~~~~G~~lG~~l~~~~ 97 (258)
T COG0730 68 RGNVDWKLALILLLGALIGAFLGALLALLL 97 (258)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456789999999999999999997665544
No 37
>PRK09713 focB putative formate transporter; Provisional
Probab=39.02 E-value=2.9e+02 Score=24.75 Aligned_cols=108 Identities=9% Similarity=0.005 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCcchhHHHHHHHHhHHHHHHHHHHHHhhc--hhhhhcCCC
Q 024444 76 LLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMK--HEYNSLGGG 153 (267)
Q Consensus 76 ~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~--~~~~~~~~~ 153 (267)
.+..++.+.+.+.+.++..+..--+ |=. ++.-...|+.+|++..-.|.-=.+|=++|++++..+.. +........
T Consensus 67 ~ll~g~~F~vGLilIv~~g~ELfTg--N~~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~ 143 (282)
T PRK09713 67 HLVGGLCFTLGFILLAVCGTSLFTS--SVM-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAM 143 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCccccHH--HHH-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchh
Confidence 3444555666565565554443212 222 22224678888888885554444455555444433321 111000000
Q ss_pred -------cccccCCCccchhHHHHHHHHHHHHHHHHHhcC
Q 024444 154 -------ANTVASGYNKGSALGAEIIGTFVLVYTVFSATD 186 (267)
Q Consensus 154 -------~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~ 186 (267)
......+.+..+.|+--.+|.++.++.++....
T Consensus 144 ~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~~~ 183 (282)
T PRK09713 144 WGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMSYC 183 (282)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 001123457788999999999999998886443
No 38
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=37.17 E-value=11 Score=28.91 Aligned_cols=20 Identities=30% Similarity=0.557 Sum_probs=17.4
Q ss_pred ccCCCccChHHHHHHHHhcc
Q 024444 96 GISGGHINPAVTFGLFLARK 115 (267)
Q Consensus 96 ~iSGah~NPavTla~~l~g~ 115 (267)
.-|+||+||.+.++-.+.++
T Consensus 6 ~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 6 GGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp ESSHHHHHHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHhcc
Confidence 35789999999999999865
No 39
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=35.38 E-value=8.7 Score=35.31 Aligned_cols=22 Identities=32% Similarity=0.549 Sum_probs=18.4
Q ss_pred HHhccCCCccChHHHHHHHHhc
Q 024444 93 CTAGISGGHINPAVTFGLFLAR 114 (267)
Q Consensus 93 ~~~~iSGah~NPavTla~~l~g 114 (267)
+.++-||||+.||++++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 3456789999999999988874
No 40
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=32.87 E-value=4.9e+02 Score=25.65 Aligned_cols=34 Identities=12% Similarity=0.122 Sum_probs=28.4
Q ss_pred HhccCcchhHHHHHHHHhHHHHHHHHHHHHhhch
Q 024444 112 LARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH 145 (267)
Q Consensus 112 l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 145 (267)
....-|.+....++.+.++|+.+|.+..+.++|.
T Consensus 380 a~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~ 413 (650)
T PF04632_consen 380 ATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPH 413 (650)
T ss_pred cCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3344578899999999999999999999988875
No 41
>TIGR02762 TraL_TIGR type IV conjugative transfer system protein TraL. This protein is part of the type IV secretion system for conjugative plasmid transfer. The function of the TraL protein is unknown.
Probab=28.57 E-value=10 Score=28.06 Aligned_cols=18 Identities=6% Similarity=-0.197 Sum_probs=14.2
Q ss_pred cCCCCCCCcceEEeechh
Q 024444 235 YNNDKAWDDHVRKKLCIS 252 (267)
Q Consensus 235 ~~~~~~~~~~wVy~v~P~ 252 (267)
.++++.|-+|+.||.+|.
T Consensus 61 ~g~~~~~l~h~~YW~~p~ 78 (95)
T TIGR02762 61 GGEGENFLLHLFYWYLPG 78 (95)
T ss_pred cCCChhHHHHHHHHHccc
Confidence 356677889999998875
No 42
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=28.02 E-value=4.7e+02 Score=23.95 Aligned_cols=137 Identities=17% Similarity=0.054 Sum_probs=66.8
Q ss_pred CCccChHHHHHHHHhc-cCcchhHH-HHHHHHhHHHHHHHHHHHHhhchhhhhcCCCcccccCCCccchhHHHHHHHHHH
Q 024444 99 GGHINPAVTFGLFLAR-KVSLIRAV-AYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFV 176 (267)
Q Consensus 99 Gah~NPavTla~~l~g-~~~~~~~~-~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~ 176 (267)
|+|=+ |-.++..... -++.+++. +--+..++|++++..-+-....+.. .+.+..+. .+..|...+.+
T Consensus 20 Gand~-ana~gtaVgs~alt~~~Av~laavf~f~Ga~l~g~~V~~TI~~~i--------v~~~~~~~--~~~~~~~~aaL 88 (326)
T COG0306 20 GANDT-ANAVGTAVGSGALTPRQAVLLAAVFNFLGALLGGGNVAETIGSGI--------VDPGLLND--SLTPAGVLAAL 88 (326)
T ss_pred cccch-hhhhhhhhccCCccHHHHHHHHHHHHHHHHHHcCccHHHHHhcCC--------CCchhccc--hhhHHHHHHHH
Confidence 56655 6677777754 45544433 2335566676555432222211111 00111122 45666666666
Q ss_pred HHHHHHH-hcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchhhhHHHHHhcCCCCCCCcceEEeechhHHH
Q 024444 177 LVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHVRKKLCISEFC 255 (267)
Q Consensus 177 l~~~il~-~~~~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~tG~~~NPAr~lg~~i~~~~~~~~~~~wVy~v~P~~Ga 255 (267)
+-..+.. ++..+. .+ -....-.+|-.+.+.....+. .+.-..++.-+. .+.+.|++|.
T Consensus 89 laa~~w~~ia~~~G-iP----~StshaiiGaiiG~gla~~~~-----~~~~~~~~~Iv~-----------swvlsPii~~ 147 (326)
T COG0306 89 LAAILWNLIATYLG-IP----VSTSHALIGAIIGAGLALGGG-----VVDWGVLGKIVA-----------SWVLSPILGG 147 (326)
T ss_pred HHHHHHHHHHHHcC-Cc----hhHHHHHHHHHHHHHHHHccc-----chhHHHHHHHHH-----------HHHHHHHHHH
Confidence 6555443 222222 11 123345666666655443322 121111111111 1568899999
Q ss_pred HHHHHHHHHhhC
Q 024444 256 VCLLCFYDILNK 267 (267)
Q Consensus 256 ~~a~~ly~~~~~ 267 (267)
+++.++|++++|
T Consensus 148 ~ia~~l~~~~~~ 159 (326)
T COG0306 148 VLAYLLYSLLRR 159 (326)
T ss_pred HHHHHHHHHHHH
Confidence 999999988864
No 43
>PF03842 Silic_transp: Silicon transporter; InterPro: IPR004693 Marine diatoms such as Cylindrotheca fusiformis encode at least six silicon transport protein homologues which exhibit similar size and topology. One characterised member of the family (Sit1) functions in the energy-dependent uptake of either silicic acid [Si(OH)4] or silicate [Si(OH)3O-] by a Na+ symport mechanism. The system is found in marine diatoms, which make their "glass houses" out of silicon.
Probab=26.29 E-value=5.5e+02 Score=24.53 Aligned_cols=111 Identities=13% Similarity=0.131 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCccChHHHHHHHHhccCcchhHHHHHHHHhHHHHHHHHHHHHhhc----hhhhhcCCCcc
Q 024444 80 AWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMK----HEYNSLGGGAN 155 (267)
Q Consensus 80 ~l~~g~~v~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~----~~~~~~~~~~~ 155 (267)
=+..|++..+.....|..+ ++.|-+-..-.++...+-....++-+.-++-|-+=++-+++.+.. ++...++.+.+
T Consensus 138 FL~~GlaMil~t~~lGQLt-tQVNAshcMlDyINnyFalFTlyvam~IEfsGvmHssYLIq~i~~~~sGKPI~SNE~Prt 216 (512)
T PF03842_consen 138 FLDIGLAMILFTCVLGQLT-TQVNASHCMLDYINNYFALFTLYVAMAIEFSGVMHSSYLIQNILSALSGKPIESNEPPRT 216 (512)
T ss_pred hhccchHHHHHHHhhcccc-HhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCcccCCCcch
Confidence 3445666666666667665 788888777777777766666777777788887777777665543 33333332222
Q ss_pred cccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCCC
Q 024444 156 TVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 191 (267)
Q Consensus 156 ~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~ 191 (267)
....-+-+.|..++=.+..|.+-.++-+..+.+..-
T Consensus 217 g~~~~FFWgRvlmSl~ILgF~lAVtl~ALf~G~Ttm 252 (512)
T PF03842_consen 217 GFQFAFFWGRVLMSLAILGFCLAVTLVALFNGKTTM 252 (512)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcee
Confidence 111223345677777777777777666666555543
No 44
>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast. OPT1 is not a member of the ABC or PTR membrane transport families [].; GO: 0055085 transmembrane transport
Probab=23.51 E-value=6e+02 Score=25.22 Aligned_cols=20 Identities=25% Similarity=0.378 Sum_probs=12.8
Q ss_pred ccchhHHHHHHHHHHHHHHH
Q 024444 162 NKGSALGAEIIGTFVLVYTV 181 (267)
Q Consensus 162 ~~~~~~~~E~~~T~~l~~~i 181 (267)
+....|..|+++|++=.++.
T Consensus 466 ~Pr~~f~~Q~iG~~ig~~v~ 485 (624)
T PF03169_consen 466 PPRAQFYAQIIGTIIGAFVA 485 (624)
T ss_pred ChHHHHHHHHHHHHHHHHHH
Confidence 44557778877777655543
No 45
>PRK10712 PTS system fructose-specific transporter subunits IIBC; Provisional
Probab=23.15 E-value=7.1e+02 Score=24.70 Aligned_cols=24 Identities=13% Similarity=0.027 Sum_probs=21.1
Q ss_pred ceEEeechhHHHHHHHHHHHHhhC
Q 024444 244 HVRKKLCISEFCVCLLCFYDILNK 267 (267)
Q Consensus 244 ~wVy~v~P~~Ga~~a~~ly~~~~~ 267 (267)
.|.|+++-.+|.++..+++.+++|
T Consensus 530 ~~~~iiai~ig~vvt~~~~~~~k~ 553 (563)
T PRK10712 530 VLGYLVAIIAGTLVAGLAYAFLKR 553 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 677999999999999999988865
No 46
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=22.58 E-value=1.8e+02 Score=21.88 Aligned_cols=47 Identities=19% Similarity=0.335 Sum_probs=36.7
Q ss_pred CCccChHHHHHHHHh-ccC-cchhHHHHHHHHhHHHHHHHHHHHHhhch
Q 024444 99 GGHINPAVTFGLFLA-RKV-SLIRAVAYMVAQCLGAICGVGLVKAFMKH 145 (267)
Q Consensus 99 Gah~NPavTla~~l~-g~~-~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 145 (267)
|+.|.|-..+--=+. |.. +..|-.+|+++-++|+=.|..+++++.++
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~~~ 101 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLTGG 101 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence 577888777766443 332 57789999999999999999999887653
No 47
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=21.45 E-value=4.9e+02 Score=21.76 Aligned_cols=26 Identities=12% Similarity=0.333 Sum_probs=21.9
Q ss_pred cCcchhHHHHHHHHhHHHHHHHHHHH
Q 024444 115 KVSLIRAVAYMVAQCLGAICGVGLVK 140 (267)
Q Consensus 115 ~~~~~~~~~yi~aQ~lGa~~ga~~~~ 140 (267)
+.+|+....+.+.-+.|..+|+.+..
T Consensus 60 ~i~~~~~~~~~~~~~~g~~iG~~l~~ 85 (240)
T PF01925_consen 60 NIDWKIVLPLIIGALIGVVIGAWLLS 85 (240)
T ss_pred ccchhhhhhhhhHhHHHHHHHHhhhc
Confidence 47899999999999999998877765
Done!