Query 024452
Match_columns 267
No_of_seqs 133 out of 1203
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:42:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024452.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024452hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02236 choline kinase 100.0 6.7E-40 1.5E-44 292.5 28.4 238 1-239 3-240 (344)
2 PLN02421 phosphotransferase, a 100.0 3E-38 6.6E-43 280.5 22.5 217 20-239 1-222 (330)
3 PTZ00296 choline kinase; Provi 100.0 1.7E-36 3.8E-41 277.1 24.4 229 6-239 78-322 (442)
4 KOG4720 Ethanolamine kinase [L 100.0 1.2E-36 2.6E-41 255.9 18.1 237 15-264 66-318 (391)
5 PTZ00384 choline kinase; Provi 100.0 1.4E-34 3E-39 260.4 23.2 223 12-239 29-265 (383)
6 cd05157 ETNK_euk Ethanolamine 100.0 1.3E-33 2.9E-38 239.2 21.7 199 38-239 1-210 (235)
7 KOG2686 Choline kinase [Cell w 100.0 4.1E-33 9E-38 242.0 18.8 224 13-239 19-252 (366)
8 cd05156 ChoK_euk Choline Kinas 100.0 1.4E-31 3.1E-36 235.2 20.3 201 39-239 2-222 (302)
9 PF01633 Choline_kinase: Choli 100.0 6.6E-32 1.4E-36 225.6 14.1 176 64-239 2-183 (211)
10 TIGR02721 ycfN_thiK thiamine k 100.0 3.1E-30 6.7E-35 221.6 20.7 182 41-239 2-184 (256)
11 cd05151 ChoK Choline Kinase (C 99.9 1.3E-24 2.8E-29 174.6 17.0 163 39-265 2-166 (170)
12 cd05154 ACAD10_11_like Acyl-Co 99.9 1E-23 2.2E-28 176.2 19.2 190 39-240 2-216 (223)
13 TIGR02172 Fb_sc_TIGR02172 Fibr 99.9 3.3E-24 7.2E-29 180.7 15.1 176 39-239 5-191 (226)
14 cd05153 HomoserineK_II Homoser 99.9 3.7E-23 8E-28 181.1 17.5 227 15-264 2-240 (296)
15 cd05150 APH Aminoglycoside 3'- 99.9 2.2E-22 4.7E-27 171.5 19.4 196 39-244 2-207 (244)
16 TIGR00938 thrB_alt homoserine 99.9 3E-22 6.4E-27 176.5 19.7 209 12-240 7-227 (307)
17 PRK05231 homoserine kinase; Pr 99.9 4.6E-22 9.9E-27 176.1 19.3 207 12-240 7-227 (319)
18 PF01636 APH: Phosphotransfera 99.9 1.4E-22 3.1E-27 170.2 10.5 195 39-241 1-208 (239)
19 cd05155 APH_ChoK_like_1 Unchar 99.9 1.6E-21 3.5E-26 165.4 16.2 186 40-239 2-203 (235)
20 COG3173 Predicted aminoglycosi 99.9 2.7E-20 5.8E-25 162.6 20.2 223 10-248 6-246 (321)
21 PRK09550 mtnK methylthioribose 99.9 2.7E-20 5.9E-25 167.8 17.9 237 13-261 8-289 (401)
22 PRK12396 5-methylribose kinase 99.8 1.5E-20 3.2E-25 168.0 14.5 237 13-261 11-295 (409)
23 PRK11768 serine/threonine prot 99.8 1.6E-19 3.5E-24 160.2 19.5 211 7-239 6-233 (325)
24 PLN02876 acyl-CoA dehydrogenas 99.8 5.1E-19 1.1E-23 174.4 24.2 221 12-239 18-266 (822)
25 PLN02756 S-methyl-5-thioribose 99.8 1.3E-18 2.8E-23 156.4 18.9 238 12-261 9-298 (418)
26 COG2334 Putative homoserine ki 99.8 1.2E-18 2.7E-23 153.7 18.3 213 38-264 29-261 (331)
27 PRK10593 hypothetical protein; 99.8 2.3E-18 5.1E-23 150.9 18.3 207 16-240 3-235 (297)
28 cd05152 MPH2' Macrolide 2'-Pho 99.8 5.3E-18 1.1E-22 147.1 17.4 193 38-240 14-226 (276)
29 TIGR01767 MTRK 5-methylthiorib 99.8 6.5E-18 1.4E-22 149.5 13.7 212 42-261 2-259 (370)
30 TIGR02906 spore_CotS spore coa 99.8 3.4E-17 7.5E-22 144.2 18.0 201 49-264 10-250 (313)
31 COG0510 ycfN Thiamine kinase a 99.7 8E-18 1.7E-22 145.1 11.2 198 39-265 10-217 (269)
32 PF03881 Fructosamin_kin: Fruc 99.7 2.3E-17 4.9E-22 143.4 11.6 203 16-241 4-228 (288)
33 TIGR02904 spore_ysxE spore coa 99.7 1E-16 2.2E-21 141.5 14.8 205 45-264 16-259 (309)
34 PRK06148 hypothetical protein; 99.7 2E-16 4.4E-21 158.4 17.5 235 6-264 5-269 (1013)
35 PRK10271 thiK thiamine kinase; 99.7 7.8E-17 1.7E-21 130.6 11.5 115 109-239 1-115 (188)
36 PRK06149 hypothetical protein; 99.7 4.1E-16 9E-21 156.0 17.4 235 8-264 13-276 (972)
37 COG3001 Uncharacterized protei 99.7 3.7E-16 8E-21 128.7 12.7 201 16-243 4-228 (286)
38 cd05120 APH_ChoK_like Aminogly 99.6 2.2E-14 4.8E-19 111.5 14.3 143 40-243 3-151 (155)
39 COG4857 Predicted kinase [Gene 99.4 5.8E-13 1.3E-17 112.6 8.1 217 36-263 31-298 (408)
40 TIGR03724 arch_bud32 Kae1-asso 99.3 5.7E-11 1.2E-15 97.8 13.5 133 43-239 2-147 (199)
41 COG3231 Aph Aminoglycoside pho 99.3 1.3E-10 2.8E-15 95.7 15.1 193 38-242 21-227 (266)
42 PF04655 APH_6_hur: Aminoglyco 99.2 7.4E-11 1.6E-15 100.7 11.3 182 42-240 9-199 (253)
43 PF07914 DUF1679: Protein of u 99.2 4.6E-10 1E-14 102.5 16.6 217 15-239 16-312 (414)
44 PRK14879 serine/threonine prot 99.2 1.9E-10 4.2E-15 95.4 12.8 135 41-239 2-152 (211)
45 PF02958 EcKinase: Ecdysteroid 99.2 4.4E-10 9.4E-15 98.4 13.7 195 45-239 3-259 (294)
46 COG3642 Mn2+-dependent serine/ 99.2 3.2E-10 6.9E-15 91.1 11.5 139 42-245 3-154 (204)
47 PRK10359 lipopolysaccharide co 99.1 1.2E-09 2.7E-14 91.8 12.0 141 18-230 22-183 (232)
48 KOG3087 Serine/threonine prote 98.9 1.8E-08 3.8E-13 81.0 12.2 159 39-248 11-187 (229)
49 COG3178 Predicted phosphotrans 98.9 2.9E-09 6.4E-14 91.0 7.3 172 84-264 69-265 (351)
50 PRK01723 3-deoxy-D-manno-octul 98.9 2E-08 4.3E-13 85.5 12.0 128 45-232 42-193 (239)
51 TIGR02905 spore_yutH spore coa 98.9 4.3E-08 9.4E-13 86.7 13.7 193 50-264 20-250 (313)
52 cd05146 RIO3_euk RIO kinase fa 98.9 4.9E-08 1.1E-12 80.3 12.5 104 84-236 75-181 (197)
53 smart00090 RIO RIO-like kinase 98.9 9.9E-08 2.1E-12 81.1 14.5 140 41-234 34-202 (237)
54 cd05147 RIO1_euk RIO kinase fa 98.9 2.1E-08 4.5E-13 82.3 10.0 134 42-229 4-165 (190)
55 cd05145 RIO1_like RIO kinase f 98.9 4.2E-08 9.1E-13 80.4 11.8 142 41-236 3-174 (190)
56 PRK09605 bifunctional UGMP fam 98.8 1.8E-08 3.8E-13 95.5 10.8 137 40-240 338-486 (535)
57 smart00587 CHK ZnF_C4 abd HLH 98.8 8.4E-09 1.8E-13 85.1 6.7 66 197-265 118-188 (196)
58 cd05119 RIO RIO kinase family, 98.8 1.1E-07 2.3E-12 77.3 11.9 133 42-229 4-162 (187)
59 COG0478 RIO-like serine/threon 98.8 5.7E-08 1.2E-12 82.6 10.1 130 42-230 98-251 (304)
60 PF01163 RIO1: RIO1 family; I 98.8 8.9E-08 1.9E-12 78.3 10.9 110 83-243 56-170 (188)
61 cd05144 RIO2_C RIO kinase fami 98.7 3.2E-07 7E-12 75.5 13.0 129 41-229 21-173 (198)
62 TIGR01982 UbiB 2-polyprenylphe 98.7 1.3E-07 2.8E-12 87.4 10.6 164 9-230 93-306 (437)
63 KOG3021 Predicted kinase [Gene 98.7 2.5E-07 5.5E-12 76.1 10.6 164 63-239 34-248 (313)
64 PRK09188 serine/threonine prot 98.7 2.5E-07 5.4E-12 83.3 11.2 133 39-230 22-161 (365)
65 TIGR02457 TreS_Cterm trehalose 98.6 3.2E-07 7E-12 85.9 9.6 176 38-227 168-405 (528)
66 PF06176 WaaY: Lipopolysacchar 98.5 3.4E-06 7.3E-11 70.3 14.0 143 15-230 19-183 (229)
67 PRK12274 serine/threonine prot 98.5 7.4E-07 1.6E-11 73.9 10.0 130 39-230 6-141 (218)
68 PF06293 Kdo: Lipopolysacchari 98.5 5E-07 1.1E-11 75.1 9.2 65 197-261 135-201 (206)
69 COG0661 AarF Predicted unusual 98.5 1.9E-07 4.2E-12 87.3 7.4 164 9-230 101-314 (517)
70 PRK04750 ubiB putative ubiquin 98.5 3.5E-07 7.6E-12 86.1 9.0 105 9-120 95-249 (537)
71 PRK15123 lipopolysaccharide co 98.4 6.4E-06 1.4E-10 71.2 12.9 47 197-243 155-213 (268)
72 cd00180 PKc Catalytic domain o 98.3 3.2E-06 6.9E-11 68.3 9.3 138 43-232 1-144 (215)
73 PLN00034 mitogen-activated pro 98.3 3.4E-06 7.4E-11 75.6 10.3 133 39-229 78-216 (353)
74 PF00069 Pkinase: Protein kina 98.3 1.8E-06 3.9E-11 73.1 7.7 136 40-229 4-146 (260)
75 COG1718 RIO1 Serine/threonine 98.3 2.8E-05 6.1E-10 65.7 13.5 154 42-249 55-237 (268)
76 KOG0605 NDR and related serine 98.3 3.6E-06 7.9E-11 77.1 8.7 139 36-229 142-289 (550)
77 cd05587 STKc_cPKC Catalytic do 98.2 8E-06 1.7E-10 72.2 9.8 137 40-229 5-149 (324)
78 cd06638 STKc_myosinIIIA Cataly 98.2 1.5E-05 3.3E-10 68.7 11.1 141 40-229 23-172 (286)
79 PRK09902 hypothetical protein; 98.2 2.9E-05 6.2E-10 64.5 11.4 50 197-246 145-195 (216)
80 cd05598 STKc_LATS Catalytic do 98.2 1.1E-05 2.5E-10 72.7 9.7 137 39-229 5-149 (376)
81 KOG1235 Predicted unusual prot 98.2 1.5E-05 3.3E-10 74.6 10.4 165 9-230 137-354 (538)
82 cd05591 STKc_nPKC_epsilon Cata 98.1 1.4E-05 3E-10 70.6 9.1 134 43-229 3-144 (321)
83 cd05600 STKc_Sid2p_Dbf2p Catal 98.1 1.6E-05 3.6E-10 70.4 9.5 137 39-229 5-149 (333)
84 cd05627 STKc_NDR2 Catalytic do 98.1 1.5E-05 3.3E-10 71.5 9.2 137 39-229 5-149 (360)
85 smart00219 TyrKc Tyrosine kina 98.1 2.5E-05 5.4E-10 65.9 9.5 142 41-230 5-152 (258)
86 cd05068 PTKc_Frk_like Catalyti 98.1 3.1E-05 6.6E-10 65.9 10.1 140 37-229 7-151 (261)
87 cd05628 STKc_NDR1 Catalytic do 98.1 1.8E-05 3.9E-10 71.2 9.1 137 39-229 5-149 (363)
88 cd05615 STKc_cPKC_alpha Cataly 98.1 2E-05 4.2E-10 69.8 9.1 137 40-229 5-149 (323)
89 cd06644 STKc_STK10_LOK Catalyt 98.1 3.6E-05 7.9E-10 66.7 10.6 137 40-229 17-158 (292)
90 cd05590 STKc_nPKC_eta Catalyti 98.1 1.2E-05 2.5E-10 71.1 7.6 135 42-229 2-144 (320)
91 cd06608 STKc_myosinIII_like Ca 98.0 4.5E-05 9.7E-10 65.0 10.5 141 40-229 11-161 (275)
92 cd05084 PTKc_Fes Catalytic dom 98.0 2.4E-05 5.3E-10 66.1 8.7 135 42-229 2-142 (252)
93 cd05614 STKc_MSK2_N N-terminal 98.0 4.4E-05 9.6E-10 67.6 10.7 140 40-229 5-153 (332)
94 cd05601 STKc_CRIK Catalytic do 98.0 2.2E-05 4.8E-10 69.4 8.8 138 39-229 5-150 (330)
95 cd05595 STKc_PKB_beta Catalyti 98.0 2E-05 4.3E-10 69.7 8.4 133 43-229 3-143 (323)
96 cd06655 STKc_PAK2 Catalytic do 98.0 6.5E-05 1.4E-09 65.5 11.5 137 38-229 22-163 (296)
97 cd05069 PTKc_Yes Catalytic dom 98.0 3.6E-05 7.7E-10 65.5 9.6 137 40-229 11-150 (260)
98 cd05599 STKc_NDR_like Catalyti 98.0 1.3E-05 2.9E-10 71.9 7.3 137 39-229 5-149 (364)
99 cd05588 STKc_aPKC Catalytic do 98.0 3.1E-05 6.8E-10 68.7 9.4 134 43-229 3-144 (329)
100 cd05582 STKc_RSK_N N-terminal 98.0 3.1E-05 6.6E-10 68.3 9.3 137 42-229 3-146 (318)
101 cd05620 STKc_nPKC_delta Cataly 98.0 1.9E-05 4E-10 69.7 7.9 134 43-229 3-144 (316)
102 cd05593 STKc_PKB_gamma Catalyt 98.0 2.9E-05 6.3E-10 68.9 8.7 133 43-229 3-143 (328)
103 cd05592 STKc_nPKC_theta_delta 98.0 1.9E-05 4.1E-10 69.7 7.4 134 43-229 3-144 (316)
104 cd06656 STKc_PAK3 Catalytic do 98.0 2.6E-05 5.6E-10 68.1 8.1 137 38-229 22-163 (297)
105 cd05629 STKc_NDR_like_fungal C 98.0 3.7E-05 8.1E-10 69.5 9.4 137 39-229 5-149 (377)
106 cd05570 STKc_PKC Catalytic dom 98.0 1.8E-05 3.9E-10 69.8 7.1 134 43-229 3-144 (318)
107 cd05584 STKc_p70S6K Catalytic 98.0 4E-05 8.7E-10 67.7 9.3 138 41-229 2-148 (323)
108 cd05597 STKc_DMPK_like Catalyt 98.0 4.7E-05 1E-09 67.6 9.8 137 39-228 5-149 (331)
109 KOG0610 Putative serine/threon 98.0 3.1E-05 6.7E-10 69.2 8.3 138 40-229 82-227 (459)
110 cd06654 STKc_PAK1 Catalytic do 98.0 8.3E-05 1.8E-09 64.8 11.0 137 38-229 23-164 (296)
111 cd05631 STKc_GRK4 Catalytic do 98.0 5E-05 1.1E-09 65.8 9.5 139 39-229 4-150 (285)
112 cd05573 STKc_ROCK_NDR_like Cat 98.0 1.6E-05 3.5E-10 70.8 6.5 138 39-230 5-150 (350)
113 cd05616 STKc_cPKC_beta Catalyt 98.0 5.1E-05 1.1E-09 67.0 9.7 137 40-229 5-149 (323)
114 cd08217 STKc_Nek2 Catalytic do 98.0 7.8E-05 1.7E-09 63.1 10.3 146 40-230 5-159 (265)
115 cd05071 PTKc_Src Catalytic dom 98.0 6.2E-05 1.4E-09 64.2 9.8 137 40-229 11-150 (262)
116 cd05596 STKc_ROCK Catalytic do 98.0 5.5E-05 1.2E-09 68.3 9.8 136 39-229 47-190 (370)
117 cd05571 STKc_PKB Catalytic dom 97.9 5.7E-05 1.2E-09 66.8 9.7 134 42-229 2-143 (323)
118 cd06639 STKc_myosinIIIB Cataly 97.9 0.00013 2.9E-09 63.1 11.7 142 39-229 26-176 (291)
119 cd05618 STKc_aPKC_iota Catalyt 97.9 3.5E-05 7.7E-10 68.4 8.2 135 42-229 2-144 (329)
120 cd05052 PTKc_Abl Catalytic dom 97.9 5.9E-05 1.3E-09 64.3 9.2 137 41-229 12-152 (263)
121 cd05621 STKc_ROCK2 Catalytic d 97.9 6.2E-05 1.3E-09 68.1 9.7 136 39-229 47-190 (370)
122 cd05122 PKc_STE Catalytic doma 97.9 5.8E-05 1.3E-09 63.1 9.0 138 40-230 5-147 (253)
123 cd05583 STKc_MSK_N N-terminal 97.9 4.8E-05 1E-09 65.8 8.6 140 40-229 5-153 (288)
124 cd05619 STKc_nPKC_theta Cataly 97.9 3.3E-05 7.2E-10 68.2 7.6 135 42-229 2-144 (316)
125 cd05594 STKc_PKB_alpha Catalyt 97.9 7.4E-05 1.6E-09 66.1 9.8 30 199-229 115-144 (325)
126 PTZ00263 protein kinase A cata 97.9 3.9E-05 8.5E-10 68.0 8.0 137 39-229 22-166 (329)
127 cd05585 STKc_YPK1_like Catalyt 97.9 6E-05 1.3E-09 66.3 9.1 133 44-230 2-142 (312)
128 cd05608 STKc_GRK1 Catalytic do 97.9 6.2E-05 1.3E-09 65.0 8.8 136 44-229 2-145 (280)
129 KOG2268 Serine/threonine prote 97.9 1.4E-05 3E-10 70.0 4.6 90 83-228 158-249 (465)
130 cd06621 PKc_MAPKK_Pek1_like Ca 97.9 0.00017 3.6E-09 62.4 11.4 142 38-229 4-153 (287)
131 cd07869 STKc_PFTAIRE1 Catalyti 97.9 8.6E-05 1.9E-09 64.8 9.6 137 39-229 9-151 (303)
132 cd05580 STKc_PKA Catalytic dom 97.9 0.00012 2.6E-09 63.4 10.5 137 40-230 6-150 (290)
133 cd05589 STKc_PKN Catalytic dom 97.9 7.7E-05 1.7E-09 65.9 9.3 136 40-229 4-149 (324)
134 cd05603 STKc_SGK2 Catalytic do 97.9 4.3E-05 9.4E-10 67.4 7.7 29 200-229 116-144 (321)
135 cd06649 PKc_MEK2 Catalytic dom 97.9 0.00012 2.6E-09 64.9 10.5 139 38-229 8-152 (331)
136 cd05034 PTKc_Src_like Catalyti 97.9 9.1E-05 2E-09 62.9 9.3 137 40-229 11-151 (261)
137 cd05632 STKc_GRK5 Catalytic do 97.9 0.00018 3.9E-09 62.2 11.3 140 39-229 4-150 (285)
138 cd05612 STKc_PRKX_like Catalyt 97.9 4.9E-05 1.1E-09 66.1 7.6 137 39-229 5-149 (291)
139 cd07848 STKc_CDKL5 Catalytic d 97.9 8E-05 1.7E-09 64.3 9.0 136 40-229 6-148 (287)
140 cd05072 PTKc_Lyn Catalytic dom 97.9 9.3E-05 2E-09 62.9 9.1 138 39-229 10-151 (261)
141 KOG0592 3-phosphoinositide-dep 97.9 0.00012 2.6E-09 67.5 10.1 140 36-230 73-223 (604)
142 cd05039 PTKc_Csk_like Catalyti 97.9 9.3E-05 2E-09 62.7 9.0 137 40-230 11-151 (256)
143 cd05079 PTKc_Jak1_rpt2 Catalyt 97.9 0.0001 2.3E-09 63.6 9.4 142 39-229 8-157 (284)
144 cd06624 STKc_ASK Catalytic dom 97.8 9.2E-05 2E-09 63.2 9.0 139 41-229 14-157 (268)
145 cd05073 PTKc_Hck Catalytic dom 97.8 0.00023 4.9E-09 60.6 11.3 139 38-229 9-150 (260)
146 cd05622 STKc_ROCK1 Catalytic d 97.8 0.00013 2.7E-09 66.1 10.2 137 38-229 46-190 (371)
147 cd06613 STKc_MAP4K3_like Catal 97.8 0.00015 3.2E-09 61.5 10.0 139 39-230 7-150 (262)
148 cd00192 PTKc Catalytic domain 97.8 0.00011 2.3E-09 62.0 9.0 146 43-230 3-154 (262)
149 cd05114 PTKc_Tec_Rlk Catalytic 97.8 0.00014 3E-09 61.6 9.7 136 40-229 9-148 (256)
150 PTZ00267 NIMA-related protein 97.8 0.00014 2.9E-09 68.2 10.2 141 40-229 72-217 (478)
151 KOG0608 Warts/lats-like serine 97.8 0.0001 2.3E-09 69.4 9.1 138 36-229 630-777 (1034)
152 cd05088 PTKc_Tie2 Catalytic do 97.8 0.00016 3.5E-09 63.2 10.1 75 41-119 13-95 (303)
153 cd05085 PTKc_Fer Catalytic dom 97.8 0.00012 2.7E-09 61.6 9.1 134 42-229 2-141 (250)
154 cd06619 PKc_MKK5 Catalytic dom 97.8 0.00025 5.5E-09 61.0 11.2 132 40-229 6-143 (279)
155 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.8 0.00011 2.3E-09 63.3 8.9 142 39-229 8-156 (284)
156 cd05066 PTKc_EphR_A Catalytic 97.8 0.00014 3.1E-09 62.1 9.4 140 40-229 9-154 (267)
157 cd06625 STKc_MEKK3_like Cataly 97.8 0.00017 3.6E-09 61.2 9.7 136 40-229 7-152 (263)
158 cd06640 STKc_MST4 Catalytic do 97.8 9.8E-05 2.1E-09 63.5 8.1 135 39-228 8-148 (277)
159 KOG1187 Serine/threonine prote 97.8 0.00018 4E-09 64.9 9.9 141 42-232 82-228 (361)
160 COG3570 StrB Streptomycin 6-ki 97.8 3.1E-05 6.7E-10 63.4 4.4 132 96-239 64-199 (274)
161 PTZ00426 cAMP-dependent protei 97.8 0.00012 2.5E-09 65.5 8.6 138 39-229 34-179 (340)
162 cd05586 STKc_Sck1_like Catalyt 97.8 0.00016 3.6E-09 63.9 9.4 29 200-229 116-144 (330)
163 cd06606 STKc_MAPKKK Catalytic 97.8 0.00013 2.9E-09 61.2 8.4 137 40-230 5-150 (260)
164 cd07871 STKc_PCTAIRE3 Catalyti 97.8 0.00016 3.5E-09 62.7 9.1 138 38-229 8-151 (288)
165 cd08215 STKc_Nek Catalytic dom 97.7 0.00027 5.8E-09 59.4 10.1 141 40-230 5-152 (258)
166 cd08228 STKc_Nek6 Catalytic do 97.7 0.00031 6.7E-09 59.8 10.5 141 40-230 7-155 (267)
167 cd05109 PTKc_HER2 Catalytic do 97.7 0.0002 4.4E-09 61.5 9.4 143 38-229 10-157 (279)
168 cd06917 STKc_NAK1_like Catalyt 97.7 0.00017 3.6E-09 61.9 8.9 135 41-229 7-149 (277)
169 cd05574 STKc_phototropin_like 97.7 0.00041 8.9E-09 60.8 11.5 138 40-229 6-151 (316)
170 cd06643 STKc_SLK Catalytic dom 97.7 0.00024 5.1E-09 61.2 9.8 136 41-229 11-151 (282)
171 KOG0581 Mitogen-activated prot 97.7 4.5E-05 9.7E-10 67.2 5.1 140 38-230 82-228 (364)
172 cd05108 PTKc_EGFR Catalytic do 97.7 0.00025 5.5E-09 62.3 10.1 142 39-229 11-157 (316)
173 cd08220 STKc_Nek8 Catalytic do 97.7 0.00017 3.7E-09 60.8 8.7 140 39-229 4-150 (256)
174 cd06615 PKc_MEK Catalytic doma 97.7 0.00029 6.4E-09 61.7 10.4 138 39-229 5-148 (308)
175 cd05617 STKc_aPKC_zeta Catalyt 97.7 0.00016 3.4E-09 64.1 8.7 135 42-229 2-144 (327)
176 cd05633 STKc_GRK3 Catalytic do 97.7 0.0003 6.4E-09 60.8 10.2 29 200-229 117-145 (279)
177 cd06614 STKc_PAK Catalytic dom 97.7 0.00024 5.2E-09 61.3 9.6 137 40-229 24-164 (286)
178 cd05626 STKc_LATS2 Catalytic d 97.7 0.00018 3.9E-09 65.2 9.1 138 38-229 4-149 (381)
179 cd05625 STKc_LATS1 Catalytic d 97.7 0.00027 5.8E-09 64.0 10.2 138 38-229 4-149 (382)
180 cd05102 PTKc_VEGFR3 Catalytic 97.7 0.00026 5.6E-09 62.8 10.0 81 40-120 12-100 (338)
181 cd05040 PTKc_Ack_like Catalyti 97.7 0.00014 3.1E-09 61.5 8.0 138 43-229 3-145 (257)
182 cd05581 STKc_PDK1 Catalytic do 97.7 4.9E-05 1.1E-09 65.0 5.1 138 40-230 6-151 (280)
183 cd05578 STKc_Yank1 Catalytic d 97.7 6.7E-05 1.4E-09 63.7 5.8 138 39-230 4-149 (258)
184 cd07872 STKc_PCTAIRE2 Catalyti 97.7 0.00026 5.6E-09 62.0 9.7 138 38-229 9-152 (309)
185 cd05611 STKc_Rim15_like Cataly 97.7 0.00023 4.9E-09 60.4 9.0 136 41-229 2-145 (260)
186 cd08225 STKc_Nek5 Catalytic do 97.7 0.00011 2.4E-09 62.0 7.1 140 40-230 5-151 (257)
187 cd07861 STKc_CDK1_euk Catalyti 97.7 0.00038 8.2E-09 59.8 10.5 139 39-229 4-149 (285)
188 cd05607 STKc_GRK7 Catalytic do 97.7 0.0002 4.4E-09 61.7 8.8 134 44-229 2-143 (277)
189 cd05067 PTKc_Lck_Blk Catalytic 97.7 0.00032 7E-09 59.5 9.8 137 40-229 11-150 (260)
190 PRK14705 glycogen branching en 97.7 0.00027 6E-09 72.1 10.6 177 39-227 148-363 (1224)
191 cd06612 STKc_MST1_2 Catalytic 97.7 0.00032 6.9E-09 59.2 9.6 135 41-229 9-147 (256)
192 PRK13184 pknD serine/threonine 97.7 0.00087 1.9E-08 66.9 13.7 146 39-229 6-161 (932)
193 cd06650 PKc_MEK1 Catalytic dom 97.7 0.00023 5.1E-09 63.2 9.0 138 39-229 9-152 (333)
194 cd05093 PTKc_TrkB Catalytic do 97.7 0.00027 5.9E-09 61.1 9.2 80 40-120 10-95 (288)
195 cd08221 STKc_Nek9 Catalytic do 97.7 0.00033 7.2E-09 59.2 9.5 140 39-230 4-150 (256)
196 PHA03390 pk1 serine/threonine- 97.7 0.0011 2.4E-08 56.8 12.8 131 43-229 24-158 (267)
197 cd06641 STKc_MST3 Catalytic do 97.7 0.00045 9.8E-09 59.3 10.3 136 39-229 8-149 (277)
198 cd05082 PTKc_Csk Catalytic dom 97.7 0.00043 9.3E-09 58.6 10.0 135 40-229 11-150 (256)
199 cd05080 PTKc_Tyk2_rpt2 Catalyt 97.7 0.00044 9.6E-09 59.5 10.2 140 39-229 8-155 (283)
200 cd05572 STKc_cGK_PKG Catalytic 97.7 0.00023 4.9E-09 60.5 8.3 133 44-230 2-142 (262)
201 cd05070 PTKc_Fyn_Yrk Catalytic 97.7 0.00045 9.8E-09 58.6 10.1 137 40-229 11-150 (260)
202 cd07832 STKc_CCRK Catalytic do 97.6 0.00025 5.4E-09 60.9 8.5 137 40-230 5-148 (286)
203 cd05605 STKc_GRK4_like Catalyt 97.6 0.00052 1.1E-08 59.4 10.5 139 39-229 4-150 (285)
204 KOG2270 Serine/threonine prote 97.6 0.00041 8.8E-09 62.0 9.6 140 43-236 152-321 (520)
205 cd07873 STKc_PCTAIRE1 Catalyti 97.6 0.00061 1.3E-08 59.3 10.9 138 38-229 9-152 (301)
206 KOG1989 ARK protein kinase fam 97.6 0.0003 6.5E-09 68.0 9.5 32 198-230 164-195 (738)
207 cd08529 STKc_FA2-like Catalyti 97.6 0.00043 9.4E-09 58.3 9.6 138 40-229 5-149 (256)
208 cd05602 STKc_SGK1 Catalytic do 97.6 0.00019 4.2E-09 63.4 7.7 29 200-229 116-144 (325)
209 cd05623 STKc_MRCK_alpha Cataly 97.6 0.00038 8.3E-09 61.7 9.6 137 39-228 5-149 (332)
210 cd05577 STKc_GRK Catalytic dom 97.6 0.00025 5.4E-09 61.0 8.1 134 44-229 2-143 (277)
211 KOG0616 cAMP-dependent protein 97.6 0.00055 1.2E-08 59.0 9.8 159 18-230 22-193 (355)
212 cd06632 STKc_MEKK1_plant Catal 97.6 0.00025 5.4E-09 59.9 7.9 135 41-229 6-150 (258)
213 cd05613 STKc_MSK1_N N-terminal 97.6 0.00048 1E-08 59.5 9.9 140 40-229 5-153 (290)
214 cd05604 STKc_SGK3 Catalytic do 97.6 0.00023 5E-09 62.9 7.9 29 200-229 116-144 (325)
215 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.6 0.00038 8.3E-09 59.5 9.1 140 43-229 3-148 (269)
216 cd07846 STKc_CDKL2_3 Catalytic 97.6 0.00017 3.7E-09 62.0 7.0 137 39-229 5-148 (286)
217 cd05630 STKc_GRK6 Catalytic do 97.6 0.00093 2E-08 57.8 11.6 139 40-229 5-150 (285)
218 cd05609 STKc_MAST Catalytic do 97.6 0.00036 7.8E-09 60.9 9.1 137 39-229 5-149 (305)
219 cd08223 STKc_Nek4 Catalytic do 97.6 0.00034 7.3E-09 59.1 8.6 138 40-229 5-150 (257)
220 cd06630 STKc_MEKK1 Catalytic d 97.6 0.00034 7.3E-09 59.5 8.6 136 41-229 6-152 (268)
221 cd05038 PTKc_Jak_rpt2 Catalyti 97.6 0.00027 5.9E-09 60.6 8.0 142 40-230 9-158 (284)
222 cd07847 STKc_CDKL1_4 Catalytic 97.6 0.00048 1E-08 59.2 9.5 136 40-229 6-148 (286)
223 cd06627 STKc_Cdc7_like Catalyt 97.6 0.00096 2.1E-08 56.0 11.2 137 40-230 5-148 (254)
224 cd05033 PTKc_EphR Catalytic do 97.6 0.00065 1.4E-08 57.9 10.2 140 40-229 9-154 (266)
225 cd06652 STKc_MEKK2 Catalytic d 97.6 0.00071 1.5E-08 57.6 10.5 136 40-229 7-154 (265)
226 cd05575 STKc_SGK Catalytic dom 97.6 0.00033 7.3E-09 61.8 8.6 29 200-229 116-144 (323)
227 cd05060 PTKc_Syk_like Catalyti 97.6 0.00052 1.1E-08 58.1 9.5 136 43-229 3-143 (257)
228 cd05094 PTKc_TrkC Catalytic do 97.6 0.00046 1E-08 59.8 9.2 80 40-120 10-95 (291)
229 cd05053 PTKc_FGFR Catalytic do 97.6 0.00047 1E-08 59.6 9.3 82 39-120 16-104 (293)
230 cd06637 STKc_TNIK Catalytic do 97.6 0.00044 9.6E-09 59.0 8.8 138 41-229 12-159 (272)
231 cd07837 STKc_CdkB_plant Cataly 97.6 0.00064 1.4E-08 58.8 9.9 143 39-229 5-159 (295)
232 cd05042 PTKc_Aatyk Catalytic d 97.6 0.00044 9.6E-09 59.0 8.8 29 200-229 120-148 (269)
233 cd07876 STKc_JNK2 Catalytic do 97.6 0.00044 9.6E-09 62.0 9.1 29 200-229 143-171 (359)
234 cd06646 STKc_MAP4K5 Catalytic 97.5 0.00038 8.2E-09 59.3 8.2 136 40-229 14-154 (267)
235 cd05059 PTKc_Tec_like Catalyti 97.5 0.0003 6.6E-09 59.6 7.4 136 40-229 9-148 (256)
236 cd08219 STKc_Nek3 Catalytic do 97.5 0.0011 2.4E-08 56.0 10.9 138 40-229 5-148 (255)
237 cd07875 STKc_JNK1 Catalytic do 97.5 0.00061 1.3E-08 61.2 9.7 29 200-229 146-174 (364)
238 cd05047 PTKc_Tie Catalytic dom 97.5 0.00067 1.5E-08 58.0 9.5 76 43-120 3-84 (270)
239 cd05036 PTKc_ALK_LTK Catalytic 97.5 0.00043 9.3E-09 59.5 8.3 81 39-120 10-97 (277)
240 cd06648 STKc_PAK_II Catalytic 97.5 0.00078 1.7E-08 58.2 9.9 136 39-229 23-163 (285)
241 cd05624 STKc_MRCK_beta Catalyt 97.5 0.0004 8.6E-09 61.6 8.2 137 39-228 5-149 (331)
242 cd06611 STKc_SLK_like Catalyti 97.5 0.00062 1.3E-08 58.5 9.1 136 41-229 11-151 (280)
243 PTZ00036 glycogen synthase kin 97.5 0.00058 1.3E-08 63.3 9.5 30 200-229 190-219 (440)
244 cd06609 STKc_MST3_like Catalyt 97.5 0.00043 9.4E-09 59.2 8.1 134 41-229 7-146 (274)
245 cd06626 STKc_MEKK4 Catalytic d 97.5 0.00071 1.5E-08 57.3 9.3 137 40-230 5-148 (264)
246 cd07833 STKc_CDKL Catalytic do 97.5 0.00047 1E-08 59.3 8.3 137 40-230 6-149 (288)
247 cd06629 STKc_MAPKKK_Bck1_like 97.5 0.0014 3.1E-08 55.9 11.1 137 40-230 6-157 (272)
248 cd05083 PTKc_Chk Catalytic dom 97.5 0.00034 7.4E-09 59.2 7.1 136 40-230 11-149 (254)
249 cd05097 PTKc_DDR_like Catalyti 97.5 0.00065 1.4E-08 59.0 9.1 29 200-229 149-177 (295)
250 cd07870 STKc_PFTAIRE2 Catalyti 97.5 0.00082 1.8E-08 58.1 9.6 138 38-229 8-151 (291)
251 cd05090 PTKc_Ror1 Catalytic do 97.5 0.00071 1.5E-08 58.2 9.1 78 41-119 11-94 (283)
252 KOG0593 Predicted protein kina 97.5 0.00017 3.7E-09 62.4 5.0 147 40-239 7-163 (396)
253 cd05048 PTKc_Ror Catalytic Dom 97.5 0.00055 1.2E-08 58.8 8.4 79 40-119 10-95 (283)
254 cd06636 STKc_MAP4K4_6 Catalyti 97.5 0.00088 1.9E-08 57.6 9.6 139 40-229 21-169 (282)
255 cd05098 PTKc_FGFR1 Catalytic d 97.5 0.00065 1.4E-08 59.4 8.9 81 40-120 23-112 (307)
256 PHA03209 serine/threonine kina 97.5 0.00081 1.8E-08 60.4 9.6 133 38-229 69-205 (357)
257 cd07874 STKc_JNK3 Catalytic do 97.5 0.0006 1.3E-08 61.0 8.8 29 200-229 139-167 (355)
258 cd07863 STKc_CDK4 Catalytic do 97.5 0.0017 3.6E-08 56.0 11.3 29 200-229 128-156 (288)
259 cd06628 STKc_MAPKKK_Byr2_like 97.5 0.0015 3.3E-08 55.5 10.8 135 41-229 6-154 (267)
260 cd06651 STKc_MEKK3 Catalytic d 97.5 0.00057 1.2E-08 58.3 8.2 136 40-229 7-154 (266)
261 cd05118 STKc_CMGC Catalytic do 97.5 0.00054 1.2E-08 58.7 8.0 136 40-229 4-146 (283)
262 cd06623 PKc_MAPKK_plant_like C 97.5 0.00058 1.3E-08 57.8 8.1 137 40-229 6-148 (264)
263 cd05115 PTKc_Zap-70 Catalytic 97.4 0.0014 3.1E-08 55.7 10.5 136 43-229 3-143 (257)
264 cd05104 PTKc_Kit Catalytic dom 97.4 0.0012 2.6E-08 59.8 10.5 80 40-119 40-126 (375)
265 cd05095 PTKc_DDR2 Catalytic do 97.4 0.00073 1.6E-08 58.7 8.8 29 200-229 150-178 (296)
266 cd05049 PTKc_Trk Catalytic dom 97.4 0.0016 3.4E-08 55.8 10.7 153 41-229 11-170 (280)
267 cd07862 STKc_CDK6 Catalytic do 97.4 0.0016 3.6E-08 56.1 10.9 29 200-229 130-158 (290)
268 cd05096 PTKc_DDR1 Catalytic do 97.4 0.00088 1.9E-08 58.4 9.2 29 200-229 158-186 (304)
269 KOG0595 Serine/threonine-prote 97.4 0.00054 1.2E-08 61.3 7.7 155 40-247 15-184 (429)
270 cd06645 STKc_MAP4K3 Catalytic 97.4 0.00077 1.7E-08 57.4 8.6 134 42-229 16-154 (267)
271 cd06635 STKc_TAO1 Catalytic do 97.4 0.001 2.2E-08 58.5 9.6 29 200-229 145-173 (317)
272 cd07841 STKc_CDK7 Catalytic do 97.4 0.00079 1.7E-08 58.3 8.8 136 40-229 5-150 (298)
273 cd05610 STKc_MASTL Catalytic d 97.4 0.00084 1.8E-08 65.6 9.8 138 39-230 8-153 (669)
274 cd05113 PTKc_Btk_Bmx Catalytic 97.4 0.002 4.4E-08 54.6 11.1 137 39-229 8-148 (256)
275 cd06617 PKc_MKK3_6 Catalytic d 97.4 0.0015 3.2E-08 56.1 10.3 29 200-229 124-152 (283)
276 cd06605 PKc_MAPKK Catalytic do 97.4 0.00065 1.4E-08 57.7 8.0 137 41-229 7-149 (265)
277 cd07840 STKc_CDK9_like Catalyt 97.4 0.00097 2.1E-08 57.1 9.2 136 40-229 4-148 (287)
278 KOG0667 Dual-specificity tyros 97.4 0.001 2.2E-08 62.6 9.7 33 198-230 307-340 (586)
279 cd05046 PTK_CCK4 Pseudokinase 97.4 0.0029 6.2E-08 54.1 12.0 80 39-119 9-95 (275)
280 cd07853 STKc_NLK Catalytic dom 97.4 0.00093 2E-08 60.2 9.4 29 200-229 123-151 (372)
281 cd05105 PTKc_PDGFR_alpha Catal 97.4 0.004 8.7E-08 57.0 13.6 81 40-120 42-129 (400)
282 cd05123 STKc_AGC Catalytic dom 97.4 0.00083 1.8E-08 56.4 8.5 132 44-229 2-141 (250)
283 cd05106 PTKc_CSF-1R Catalytic 97.4 0.00084 1.8E-08 60.7 9.0 81 40-120 43-130 (374)
284 PHA03211 serine/threonine kina 97.4 0.0013 2.7E-08 61.5 10.4 132 39-229 173-308 (461)
285 KOG0658 Glycogen synthase kina 97.4 0.00052 1.1E-08 60.5 7.2 32 199-230 144-175 (364)
286 cd05063 PTKc_EphR_A2 Catalytic 97.4 0.0018 4E-08 55.1 10.5 141 39-229 9-155 (268)
287 cd07864 STKc_CDK12 Catalytic d 97.4 0.001 2.2E-08 57.7 9.1 29 200-229 136-164 (302)
288 PLN00009 cyclin-dependent kina 97.4 0.0017 3.6E-08 56.3 10.4 139 39-229 6-151 (294)
289 PTZ00284 protein kinase; Provi 97.4 0.0013 2.8E-08 61.3 10.3 53 40-96 134-186 (467)
290 cd05041 PTKc_Fes_like Catalyti 97.4 0.0013 2.9E-08 55.3 9.5 134 42-229 2-141 (251)
291 cd08528 STKc_Nek10 Catalytic d 97.4 0.0015 3.3E-08 55.6 9.8 31 199-230 133-163 (269)
292 KOG0583 Serine/threonine prote 97.4 0.0013 2.7E-08 59.7 9.7 142 38-231 20-171 (370)
293 cd05089 PTKc_Tie1 Catalytic do 97.4 0.0016 3.4E-08 56.6 10.1 79 40-120 7-91 (297)
294 cd06610 STKc_OSR1_SPAK Catalyt 97.4 0.001 2.2E-08 56.3 8.7 139 40-229 6-150 (267)
295 cd05065 PTKc_EphR_B Catalytic 97.4 0.0021 4.5E-08 54.8 10.6 140 40-229 9-154 (269)
296 cd05116 PTKc_Syk Catalytic dom 97.4 0.0022 4.8E-08 54.3 10.7 29 200-229 115-143 (257)
297 cd05101 PTKc_FGFR2 Catalytic d 97.4 0.0027 5.8E-08 55.3 11.5 81 40-120 20-109 (304)
298 cd07845 STKc_CDK10 Catalytic d 97.4 0.0015 3.2E-08 57.1 9.8 137 39-229 11-156 (309)
299 cd07880 STKc_p38gamma_MAPK12 C 97.4 0.002 4.3E-08 57.5 10.7 57 38-98 18-77 (343)
300 cd06622 PKc_MAPKK_PBS2_like Ca 97.4 0.00023 4.9E-09 61.4 4.5 140 40-229 6-151 (286)
301 cd05037 PTK_Jak_rpt1 Pseudokin 97.4 0.00076 1.6E-08 57.0 7.6 32 199-230 120-157 (259)
302 cd05606 STKc_beta_ARK Catalyti 97.3 0.0013 2.9E-08 56.6 9.2 29 200-229 117-145 (278)
303 cd05579 STKc_MAST_like Catalyt 97.3 0.00057 1.2E-08 57.7 6.8 133 44-230 2-142 (265)
304 cd08229 STKc_Nek7 Catalytic do 97.3 0.00045 9.7E-09 58.8 6.1 139 41-229 8-154 (267)
305 cd05112 PTKc_Itk Catalytic dom 97.3 0.0023 4.9E-08 54.1 10.4 136 40-229 9-148 (256)
306 cd05099 PTKc_FGFR4 Catalytic d 97.3 0.0032 7E-08 55.2 11.6 82 39-120 16-106 (314)
307 cd05032 PTKc_InsR_like Catalyt 97.3 0.0018 4E-08 55.3 9.8 80 40-120 11-97 (277)
308 cd07830 STKc_MAK_like Catalyti 97.3 0.00054 1.2E-08 58.8 6.5 29 200-229 119-147 (283)
309 cd05092 PTKc_TrkA Catalytic do 97.3 0.0013 2.8E-08 56.6 8.9 81 39-120 9-95 (280)
310 cd07831 STKc_MOK Catalytic dom 97.3 0.0027 5.8E-08 54.4 10.7 136 40-229 4-147 (282)
311 cd07842 STKc_CDK8_like Catalyt 97.3 0.0014 3.1E-08 57.1 9.2 75 40-116 5-88 (316)
312 cd06642 STKc_STK25-YSK1 Cataly 97.3 0.0012 2.5E-08 56.7 8.4 133 42-229 11-149 (277)
313 PHA03212 serine/threonine kina 97.3 0.0068 1.5E-07 55.3 13.8 132 38-229 95-230 (391)
314 cd05050 PTKc_Musk Catalytic do 97.3 0.0015 3.3E-08 56.3 9.1 81 39-120 9-96 (288)
315 cd05148 PTKc_Srm_Brk Catalytic 97.3 0.0024 5.1E-08 54.1 10.1 136 41-229 12-152 (261)
316 cd08224 STKc_Nek6_Nek7 Catalyt 97.3 0.0063 1.4E-07 51.5 12.7 140 40-229 7-154 (267)
317 cd06657 STKc_PAK4 Catalytic do 97.3 0.002 4.2E-08 56.1 9.7 135 40-229 25-164 (292)
318 cd06607 STKc_TAO Catalytic dom 97.3 0.00096 2.1E-08 58.3 7.4 30 200-230 135-164 (307)
319 cd06658 STKc_PAK5 Catalytic do 97.3 0.00076 1.6E-08 58.7 6.7 135 40-229 27-166 (292)
320 cd07866 STKc_BUR1 Catalytic do 97.3 0.0013 2.9E-08 57.1 8.3 29 200-229 135-163 (311)
321 cd07844 STKc_PCTAIRE_like Cata 97.3 0.0019 4.2E-08 55.7 9.2 137 39-229 9-151 (291)
322 cd07849 STKc_ERK1_2_like Catal 97.3 0.0014 3E-08 58.2 8.4 29 200-229 126-154 (336)
323 PTZ00024 cyclin-dependent prot 97.2 0.0019 4.2E-08 57.1 9.3 29 200-229 139-167 (335)
324 cd05051 PTKc_DDR Catalytic dom 97.2 0.0015 3.2E-08 56.5 8.5 29 200-229 150-178 (296)
325 cd07860 STKc_CDK2_3 Catalytic 97.2 0.0024 5.1E-08 54.9 9.5 138 39-229 4-148 (284)
326 cd07859 STKc_TDY_MAPK_plant Ca 97.2 0.0015 3.2E-08 57.8 8.4 29 200-229 123-151 (338)
327 cd06653 STKc_MEKK3_like_1 Cata 97.2 0.0022 4.8E-08 54.6 9.2 136 40-229 7-154 (264)
328 cd05064 PTKc_EphR_A10 Catalyti 97.2 0.0049 1.1E-07 52.6 11.3 138 41-228 11-154 (266)
329 cd07843 STKc_CDC2L1 Catalytic 97.2 0.0014 3E-08 56.8 7.7 29 200-229 126-154 (293)
330 smart00221 STYKc Protein kinas 97.2 0.002 4.3E-08 52.8 8.4 137 41-230 5-147 (225)
331 COG2112 Predicted Ser/Thr prot 97.2 0.0018 3.9E-08 52.2 7.5 74 41-121 28-101 (201)
332 cd06620 PKc_MAPKK_Byr1_like Ca 97.2 0.0012 2.7E-08 56.8 7.3 136 41-229 11-152 (284)
333 cd07868 STKc_CDK8 Catalytic do 97.2 0.0087 1.9E-07 52.4 12.8 72 41-116 7-84 (317)
334 KOG0615 Serine/threonine prote 97.2 0.003 6.6E-08 56.8 9.6 137 38-230 175-328 (475)
335 cd08530 STKc_CNK2-like Catalyt 97.2 0.002 4.4E-08 54.1 8.4 140 40-229 5-151 (256)
336 cd07836 STKc_Pho85 Catalytic d 97.2 0.0041 8.9E-08 53.3 10.4 139 39-229 4-148 (284)
337 cd05057 PTKc_EGFR_like Catalyt 97.2 0.0054 1.2E-07 52.6 11.1 142 39-229 11-157 (279)
338 cd05061 PTKc_InsR Catalytic do 97.2 0.015 3.2E-07 50.2 13.9 150 39-229 10-167 (288)
339 KOG0578 p21-activated serine/t 97.2 0.0018 3.8E-08 60.2 8.2 137 39-231 277-419 (550)
340 PHA03207 serine/threonine kina 97.2 0.0038 8.3E-08 56.8 10.5 133 39-228 96-232 (392)
341 cd05086 PTKc_Aatyk2 Catalytic 97.1 0.0024 5.2E-08 54.6 8.6 29 200-229 119-147 (268)
342 KOG0594 Protein kinase PCTAIRE 97.1 0.0047 1E-07 54.3 10.3 32 197-229 137-168 (323)
343 cd07835 STKc_CDK1_like Catalyt 97.1 0.0025 5.5E-08 54.7 8.8 137 40-229 4-147 (283)
344 cd05100 PTKc_FGFR3 Catalytic d 97.1 0.0032 7E-08 55.8 9.6 80 40-119 17-105 (334)
345 cd05054 PTKc_VEGFR Catalytic d 97.1 0.0023 5E-08 57.0 8.7 81 40-120 12-100 (337)
346 cd08218 STKc_Nek1 Catalytic do 97.1 0.0032 7E-08 53.1 9.1 138 40-229 5-149 (256)
347 cd06634 STKc_TAO2 Catalytic do 97.1 0.0019 4.2E-08 56.5 7.9 29 200-229 135-163 (308)
348 smart00220 S_TKc Serine/Threon 97.1 0.0012 2.6E-08 54.6 6.2 128 49-230 3-136 (244)
349 cd07838 STKc_CDK4_6_like Catal 97.1 0.0044 9.5E-08 53.1 9.8 29 200-229 127-155 (287)
350 cd07867 STKc_CDC2L6 Catalytic 97.1 0.019 4E-07 50.2 13.9 72 41-116 7-84 (317)
351 cd08216 PK_STRAD Pseudokinase 97.1 0.0028 6.1E-08 55.4 8.6 29 200-229 121-149 (314)
352 PHA02988 hypothetical protein; 97.1 0.0035 7.7E-08 54.2 9.1 73 41-120 26-110 (283)
353 cd06647 STKc_PAK_I Catalytic d 97.1 0.0025 5.5E-08 55.3 8.1 137 38-229 22-163 (293)
354 cd05110 PTKc_HER4 Catalytic do 97.1 0.0038 8.2E-08 54.4 9.2 30 199-229 128-157 (303)
355 cd07839 STKc_CDK5 Catalytic do 97.1 0.0017 3.8E-08 55.7 6.9 136 40-229 5-147 (284)
356 cd05044 PTKc_c-ros Catalytic d 97.0 0.0014 3.1E-08 55.7 6.2 77 43-120 3-87 (269)
357 cd07856 STKc_Sty1_Hog1 Catalyt 97.0 0.0055 1.2E-07 54.3 10.1 135 39-229 14-156 (328)
358 cd07878 STKc_p38beta_MAPK11 Ca 97.0 0.0027 5.8E-08 56.4 8.0 29 200-229 138-166 (343)
359 cd05035 PTKc_Axl_like Catalyti 97.0 0.0071 1.5E-07 51.4 10.3 29 200-229 133-161 (273)
360 cd07850 STKc_JNK Catalytic dom 97.0 0.0049 1.1E-07 55.1 9.7 134 39-229 20-166 (353)
361 cd06659 STKc_PAK6 Catalytic do 97.0 0.0024 5.1E-08 55.7 7.4 135 40-229 26-165 (297)
362 cd05058 PTKc_Met_Ron Catalytic 97.0 0.0029 6.4E-08 53.5 7.7 29 200-229 118-146 (262)
363 cd05103 PTKc_VEGFR2 Catalytic 97.0 0.0015 3.3E-08 58.2 6.2 82 39-120 11-100 (343)
364 cd07857 STKc_MPK1 Catalytic do 97.0 0.0067 1.4E-07 53.7 10.2 29 200-229 125-153 (332)
365 cd06631 STKc_YSK4 Catalytic do 97.0 0.005 1.1E-07 52.3 8.9 134 41-229 6-150 (265)
366 PTZ00283 serine/threonine prot 97.0 0.0079 1.7E-07 56.7 10.8 29 200-229 163-191 (496)
367 cd07852 STKc_MAPK15 Catalytic 97.0 0.0082 1.8E-07 53.2 10.4 29 200-229 127-155 (337)
368 cd05111 PTK_HER3 Pseudokinase 97.0 0.0033 7.3E-08 54.1 7.7 29 200-229 129-157 (279)
369 cd05077 PTK_Jak1_rpt1 Pseudoki 96.9 0.0083 1.8E-07 51.1 9.9 31 199-229 124-160 (262)
370 cd06616 PKc_MKK4 Catalytic dom 96.9 0.0083 1.8E-07 51.6 9.9 29 200-229 128-156 (288)
371 cd05062 PTKc_IGF-1R Catalytic 96.9 0.027 5.9E-07 48.2 12.9 149 40-229 11-167 (277)
372 cd05055 PTKc_PDGFR Catalytic d 96.9 0.013 2.7E-07 51.2 10.6 143 40-229 40-189 (302)
373 cd05043 PTK_Ryk Pseudokinase d 96.8 0.013 2.9E-07 50.1 10.5 29 200-229 137-165 (280)
374 cd06618 PKc_MKK7 Catalytic dom 96.8 0.006 1.3E-07 52.9 8.3 29 200-229 135-163 (296)
375 cd05045 PTKc_RET Catalytic dom 96.8 0.01 2.2E-07 51.2 9.7 30 199-229 146-175 (290)
376 cd06633 STKc_TAO3 Catalytic do 96.8 0.019 4.1E-07 50.4 11.2 137 39-229 25-169 (313)
377 cd05075 PTKc_Axl Catalytic dom 96.8 0.014 2.9E-07 49.7 10.1 29 200-229 132-160 (272)
378 cd07879 STKc_p38delta_MAPK13 C 96.8 0.0092 2E-07 53.1 9.3 29 200-229 137-165 (342)
379 cd05056 PTKc_FAK Catalytic dom 96.8 0.0088 1.9E-07 51.0 8.8 140 40-229 11-155 (270)
380 COG2187 Uncharacterized protei 96.7 0.013 2.8E-07 50.6 9.3 110 127-239 126-251 (337)
381 KOG0032 Ca2+/calmodulin-depend 96.7 0.0057 1.2E-07 55.6 7.7 139 42-233 42-191 (382)
382 KOG0192 Tyrosine kinase specif 96.7 0.021 4.5E-07 51.6 11.1 136 43-230 49-193 (362)
383 KOG0598 Ribosomal protein S6 k 96.7 0.0052 1.1E-07 54.4 6.9 141 36-230 25-174 (357)
384 cd07829 STKc_CDK_like Catalyti 96.7 0.0039 8.4E-08 53.3 5.8 135 41-229 5-146 (282)
385 cd07855 STKc_ERK5 Catalytic do 96.7 0.0081 1.8E-07 53.2 8.0 29 200-229 127-155 (334)
386 cd08227 PK_STRAD_alpha Pseudok 96.6 0.015 3.3E-07 51.3 9.6 73 43-120 6-87 (327)
387 cd07854 STKc_MAPK4_6 Catalytic 96.6 0.0086 1.9E-07 53.3 7.9 30 200-229 134-163 (342)
388 cd07877 STKc_p38alpha_MAPK14 C 96.6 0.021 4.5E-07 50.9 10.4 29 200-229 140-168 (345)
389 cd05078 PTK_Jak2_Jak3_rpt1 Pse 96.6 0.0036 7.8E-08 53.1 5.1 30 200-229 120-156 (258)
390 PTZ00266 NIMA-related protein 96.6 0.037 8E-07 56.1 12.7 77 39-120 17-102 (1021)
391 cd05107 PTKc_PDGFR_beta Cataly 96.5 0.019 4E-07 52.7 9.6 80 41-120 43-129 (401)
392 KOG0668 Casein kinase II, alph 96.5 0.0008 1.7E-08 56.2 0.4 36 197-232 149-184 (338)
393 KOG4250 TANK binding protein k 96.4 0.0045 9.7E-08 59.1 4.7 140 40-229 18-172 (732)
394 KOG0984 Mitogen-activated prot 96.3 0.0038 8.2E-08 51.5 3.4 34 196-230 165-198 (282)
395 KOG0603 Ribosomal protein S6 k 96.3 0.0043 9.3E-08 58.5 4.0 40 198-237 433-472 (612)
396 cd07865 STKc_CDK9 Catalytic do 96.2 0.038 8.3E-07 47.8 9.5 29 200-229 139-167 (310)
397 KOG1164 Casein kinase (serine/ 96.2 0.06 1.3E-06 47.7 10.8 64 39-105 22-89 (322)
398 PF07714 Pkinase_Tyr: Protein 96.2 0.11 2.4E-06 44.0 12.1 143 40-230 4-152 (259)
399 KOG0587 Traf2- and Nck-interac 96.2 0.11 2.3E-06 51.3 12.8 143 36-229 19-171 (953)
400 cd07858 STKc_TEY_MAPK_plant Ca 96.1 0.028 6.1E-07 49.8 8.3 30 200-230 128-157 (337)
401 KOG3653 Transforming growth fa 96.1 0.0059 1.3E-07 55.9 3.8 35 195-230 331-365 (534)
402 KOG0694 Serine/threonine prote 96.1 0.07 1.5E-06 51.1 10.8 139 40-232 373-519 (694)
403 cd08222 STKc_Nek11 Catalytic d 96.0 0.016 3.4E-07 49.0 5.8 29 199-229 125-153 (260)
404 PLN00113 leucine-rich repeat r 95.9 0.068 1.5E-06 54.4 11.1 72 41-120 696-771 (968)
405 KOG0588 Serine/threonine prote 95.9 0.019 4.1E-07 54.8 6.3 135 43-231 20-162 (786)
406 KOG1152 Signal transduction se 95.9 0.1 2.2E-06 49.3 11.0 150 36-236 562-726 (772)
407 KOG0604 MAP kinase-activated p 95.8 0.0037 8E-08 54.2 1.3 34 199-232 180-215 (400)
408 KOG0197 Tyrosine kinases [Sign 95.8 0.095 2E-06 48.5 10.3 134 41-230 212-352 (468)
409 KOG0600 Cdc2-related protein k 95.7 0.04 8.7E-07 51.0 7.4 138 39-229 121-266 (560)
410 KOG0596 Dual specificity; seri 95.7 0.054 1.2E-06 50.8 8.3 30 198-229 478-507 (677)
411 PHA02882 putative serine/threo 95.3 0.01 2.3E-07 51.5 2.4 29 200-229 146-174 (294)
412 KOG0582 Ste20-like serine/thre 95.3 0.14 3E-06 47.0 9.2 141 36-228 26-173 (516)
413 cd08226 PK_STRAD_beta Pseudoki 95.3 0.091 2E-06 46.3 8.2 27 200-227 121-147 (328)
414 KOG0607 MAP kinase-interacting 95.2 0.023 4.9E-07 49.9 3.8 33 197-229 193-227 (463)
415 KOG1163 Casein kinase (serine/ 95.1 0.25 5.4E-06 42.0 9.7 71 38-114 18-93 (341)
416 COG3281 Ble Uncharacterized pr 95.1 0.018 3.9E-07 51.0 2.9 27 199-227 284-310 (438)
417 PLN03225 Serine/threonine-prot 95.1 0.01 2.3E-07 56.8 1.6 31 199-229 274-304 (566)
418 KOG0983 Mitogen-activated prot 95.0 0.013 2.8E-07 50.4 1.7 34 196-230 208-241 (391)
419 KOG0193 Serine/threonine prote 94.9 0.063 1.4E-06 50.8 6.1 141 36-232 393-539 (678)
420 KOG1006 Mitogen-activated prot 94.7 0.023 4.9E-07 48.7 2.6 31 199-230 187-217 (361)
421 PRK10345 hypothetical protein; 94.5 0.033 7.2E-07 46.4 3.0 61 39-106 6-71 (210)
422 cd05091 PTKc_Ror2 Catalytic do 94.4 0.016 3.6E-07 49.6 1.1 29 200-229 144-172 (283)
423 KOG0584 Serine/threonine prote 94.3 0.043 9.4E-07 51.9 3.7 33 197-229 162-194 (632)
424 KOG0575 Polo-like serine/threo 94.3 0.42 9.1E-06 45.2 10.1 137 40-230 23-167 (592)
425 KOG4236 Serine/threonine prote 94.3 0.27 5.9E-06 46.2 8.5 143 43-236 572-723 (888)
426 PHA03210 serine/threonine kina 94.3 0.023 4.9E-07 53.7 1.7 29 200-229 287-315 (501)
427 KOG0599 Phosphorylase kinase g 94.2 0.022 4.7E-07 49.0 1.3 31 199-230 142-172 (411)
428 KOG2345 Serine/threonine prote 94.1 0.039 8.5E-07 46.8 2.7 32 200-232 149-180 (302)
429 KOG1167 Serine/threonine prote 94.0 0.052 1.1E-06 49.0 3.3 35 196-230 148-182 (418)
430 KOG1166 Mitotic checkpoint ser 93.9 0.037 8.1E-07 55.6 2.5 32 197-228 811-848 (974)
431 KOG1165 Casein kinase (serine/ 93.9 0.42 9.1E-06 42.5 8.5 32 198-229 142-177 (449)
432 KOG2052 Activin A type IB rece 93.8 0.12 2.7E-06 47.2 5.4 36 194-230 330-365 (513)
433 KOG1035 eIF-2alpha kinase GCN2 93.6 0.035 7.6E-07 56.3 1.7 33 197-230 714-746 (1351)
434 cd07834 STKc_MAPK Catalytic do 93.5 0.033 7.1E-07 49.0 1.3 30 200-230 123-152 (330)
435 KOG0660 Mitogen-activated prot 93.1 0.046 9.9E-07 48.4 1.5 35 196-231 141-175 (359)
436 cd05576 STKc_RPK118_like Catal 93.1 0.037 8E-07 46.3 0.8 28 200-228 105-132 (237)
437 KOG0670 U4/U6-associated splic 92.7 0.066 1.4E-06 50.0 1.9 33 198-230 554-586 (752)
438 cd05074 PTKc_Tyro3 Catalytic d 92.5 0.083 1.8E-06 44.8 2.2 29 200-229 133-161 (273)
439 KOG0577 Serine/threonine prote 92.4 0.048 1E-06 51.7 0.6 43 199-242 145-187 (948)
440 KOG0659 Cdk activating kinase 92.2 0.09 2E-06 45.1 2.0 138 39-230 6-150 (318)
441 PLN03224 probable serine/threo 91.9 0.11 2.5E-06 49.0 2.5 28 200-228 329-356 (507)
442 cd07851 STKc_p38 Catalytic dom 91.6 0.071 1.5E-06 47.4 0.8 29 200-229 138-166 (343)
443 KOG0198 MEKK and related serin 91.6 0.14 3E-06 45.3 2.6 136 39-229 21-166 (313)
444 KOG0612 Rho-associated, coiled 91.3 0.098 2.1E-06 52.9 1.5 32 197-229 192-223 (1317)
445 PLN00181 protein SPA1-RELATED; 91.3 0.18 3.9E-06 50.3 3.4 31 198-229 98-128 (793)
446 KOG2269 Serine/threonine prote 91.1 0.68 1.5E-05 41.4 6.3 105 83-236 333-440 (531)
447 KOG0664 Nemo-like MAPK-related 91.0 0.13 2.8E-06 44.4 1.7 35 197-232 173-207 (449)
448 KOG0585 Ca2+/calmodulin-depend 91.0 0.14 3E-06 47.3 2.0 31 198-229 228-258 (576)
449 COG5072 ALK1 Serine/threonine 90.4 0.21 4.5E-06 45.1 2.6 70 195-266 337-428 (488)
450 KOG0665 Jun-N-terminal kinase 90.2 0.13 2.9E-06 45.1 1.2 37 197-234 135-171 (369)
451 KOG4279 Serine/threonine prote 89.7 1.7 3.7E-05 42.5 8.1 137 43-229 583-724 (1226)
452 PF12260 PIP49_C: Protein-kina 89.3 1.5 3.2E-05 35.8 6.6 106 84-233 8-114 (188)
453 KOG0661 MAPK related serine/th 88.8 0.47 1E-05 43.9 3.6 32 197-229 127-158 (538)
454 PF10009 DUF2252: Uncharacteri 88.5 0.38 8.3E-06 43.8 2.9 43 194-236 38-83 (385)
455 KOG0663 Protein kinase PITSLRE 88.4 0.29 6.3E-06 43.4 2.0 32 197-229 194-225 (419)
456 KOG0591 NIMA (never in mitosis 88.4 0.28 6E-06 42.6 1.8 31 199-230 147-177 (375)
457 KOG0199 ACK and related non-re 88.3 2.6 5.7E-05 41.2 8.3 142 42-229 117-260 (1039)
458 KOG0589 Serine/threonine prote 88.3 1.4 3E-05 40.6 6.3 149 39-239 8-164 (426)
459 KOG0579 Ste20-like serine/thre 88.2 0.27 5.8E-06 47.2 1.8 34 199-233 149-182 (1187)
460 KOG0586 Serine/threonine prote 88.2 0.23 5.1E-06 46.9 1.3 39 197-236 172-211 (596)
461 cd05076 PTK_Tyk2_rpt1 Pseudoki 86.0 0.41 8.9E-06 40.9 1.6 29 200-228 137-171 (274)
462 PF14531 Kinase-like: Kinase-l 85.7 0.46 1E-05 41.5 1.7 30 199-229 164-193 (288)
463 KOG0662 Cyclin-dependent kinas 85.5 1.7 3.7E-05 35.4 4.7 30 199-229 120-149 (292)
464 KOG0671 LAMMER dual specificit 85.0 0.96 2.1E-05 40.7 3.4 36 197-232 209-263 (415)
465 KOG0614 cGMP-dependent protein 84.5 0.45 9.7E-06 44.6 1.1 32 197-229 537-568 (732)
466 KOG4278 Protein tyrosine kinas 83.3 2.2 4.7E-05 41.3 5.0 41 181-230 374-414 (1157)
467 KOG0666 Cyclin C-dependent kin 83.1 0.82 1.8E-05 40.3 2.1 147 40-230 29-185 (438)
468 PF07387 Seadorna_VP7: Seadorn 83.1 0.74 1.6E-05 38.9 1.7 30 197-227 160-189 (308)
469 cd05170 PIKKc_SMG1 Suppressor 82.4 1.1 2.4E-05 39.5 2.8 33 196-228 206-238 (307)
470 cd00142 PI3Kc_like Phosphoinos 82.3 1.2 2.5E-05 37.3 2.7 32 198-229 127-158 (219)
471 cd00892 PIKKc_ATR ATR (Ataxia 81.9 1.2 2.6E-05 37.8 2.7 33 197-229 137-169 (237)
472 cd05171 PIKKc_ATM Ataxia telan 81.6 1.2 2.6E-05 38.7 2.6 33 196-228 178-210 (279)
473 cd05172 PIKKc_DNA-PK DNA-depen 81.4 1.5 3.3E-05 37.1 3.1 33 196-228 133-165 (235)
474 KOG0590 Checkpoint kinase and 80.8 0.93 2E-05 43.9 1.8 40 196-236 436-475 (601)
475 KOG1236 Predicted unusual prot 79.3 1 2.2E-05 41.5 1.4 29 200-228 365-396 (565)
476 cd05169 PIKKc_TOR TOR (Target 79.3 1.5 3.3E-05 38.1 2.5 33 196-228 178-210 (280)
477 smart00146 PI3Kc Phosphoinosit 79.3 1.7 3.7E-05 35.8 2.7 31 198-229 100-130 (202)
478 cd05163 TRRAP TRansformation/t 79.2 1.7 3.7E-05 37.2 2.8 32 197-228 152-183 (253)
479 cd05164 PIKKc Phosphoinositide 79.1 1.6 3.5E-05 36.6 2.5 31 198-228 130-160 (222)
480 COG0515 SPS1 Serine/threonine 78.8 1.2 2.5E-05 37.6 1.6 29 201-229 122-150 (384)
481 TIGR02569 TIGR02569_actnb cons 78.5 3.2 6.9E-05 35.6 4.1 50 183-236 158-208 (272)
482 KOG1151 Tousled-like protein k 78.4 2.3 4.9E-05 39.4 3.3 35 196-230 586-622 (775)
483 KOG1345 Serine/threonine kinas 78.3 1.9 4E-05 37.5 2.6 34 196-229 137-171 (378)
484 KOG4717 Serine/threonine prote 78.1 1.5 3.2E-05 41.4 2.1 31 199-229 137-167 (864)
485 KOG0669 Cyclin T-dependent kin 77.9 1.1 2.3E-05 38.6 1.0 30 198-228 142-171 (376)
486 KOG0574 STE20-like serine/thre 77.0 0.71 1.5E-05 40.5 -0.2 29 201-230 150-178 (502)
487 KOG0611 Predicted serine/threo 75.3 1.4 3.1E-05 40.2 1.2 32 197-229 170-201 (668)
488 PF10707 YrbL-PhoP_reg: PhoP r 73.2 3.8 8.3E-05 33.8 3.2 26 200-225 138-166 (199)
489 KOG1027 Serine/threonine prote 73.1 2 4.3E-05 42.5 1.7 32 198-229 624-659 (903)
490 KOG0597 Serine-threonine prote 72.7 1.6 3.5E-05 41.6 0.9 31 198-229 118-148 (808)
491 PF00454 PI3_PI4_kinase: Phosp 71.1 2.5 5.4E-05 35.5 1.6 33 198-230 133-165 (235)
492 cd05076 PTK_Tyk2_rpt1 Pseudoki 71.0 9.9 0.00022 32.3 5.4 80 65-145 45-138 (274)
493 PHA03111 Ser/Thr kinase; Provi 70.6 4 8.6E-05 36.7 2.8 21 196-216 299-319 (444)
494 KOG1095 Protein tyrosine kinas 70.2 1.7 3.7E-05 44.3 0.5 49 200-260 822-871 (1025)
495 KOG0580 Serine/threonine prote 68.6 1.6 3.5E-05 37.0 0.0 35 197-232 141-175 (281)
496 PF05445 Pox_ser-thr_kin: Poxv 68.3 4.6 9.9E-05 36.4 2.7 48 38-95 84-133 (434)
497 cd00893 PI4Kc_III Phosphoinosi 67.2 4.2 9.1E-05 35.6 2.3 34 196-230 136-169 (289)
498 cd05168 PI4Kc_III_beta Phospho 67.1 4.3 9.3E-05 35.6 2.3 32 197-229 139-170 (293)
499 KOG1094 Discoidin domain recep 65.9 3.4 7.3E-05 39.6 1.5 30 199-229 656-685 (807)
500 KOG1240 Protein kinase contain 64.9 1.6 3.5E-05 44.7 -0.8 39 197-236 137-175 (1431)
No 1
>PLN02236 choline kinase
Probab=100.00 E-value=6.7e-40 Score=292.47 Aligned_cols=238 Identities=68% Similarity=1.111 Sum_probs=203.5
Q ss_pred CCcccccccCCCChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccccc
Q 024452 1 MAIKTTELLPSSSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFF 80 (267)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~ 80 (267)
|..||.|+-.--++..++++|.++.|.|.++.+ ++.+++++++||+||.+|+|+.+......+.+|++|++++++..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~-~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i 81 (344)
T PLN02236 3 MVEKTVGLSSGRIPDELKRILHSLASKWGDVVD-DEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF 81 (344)
T ss_pred cccccccccCCCChHHHHHHHHHhcchhcCCCC-cCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee
Confidence 567888887777899999999999999987643 4889999999999999999986431111247899999999888899
Q ss_pred ChHHHHHHHHHHHhCCCCceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHH
Q 024452 81 NRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKW 160 (267)
Q Consensus 81 dr~~E~~~~~~l~~~gl~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~ 160 (267)
||++|..+++.|++.|++|++++.+++|+|++|++|++++..++.++.+..++|+.|++||+...+....+.+++++..|
T Consensus 82 dR~~E~~~~~~l~~~gl~P~~~~~~~~g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~ 161 (344)
T PLN02236 82 DRDDEIRTFECMSRHGQGPRLLGRFPNGRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNW 161 (344)
T ss_pred chHHHHHHHHHHHHcCCCCceEEEECCceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHH
Confidence 99999999999999999999999999899999999999999999999999999999999999987766567899999999
Q ss_pred HHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 161 VSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
..++.++......+..++..+..++++|++.+.....+.++||||++++|||++++++.+.+||||||++|+++||+|.
T Consensus 162 ~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~~Dia~ 240 (344)
T PLN02236 162 LKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVAYDIAN 240 (344)
T ss_pred HHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchHHHHHH
Confidence 9877655443322334567788888899887766677899999999999999986445799999999999999999775
No 2
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=100.00 E-value=3e-38 Score=280.51 Aligned_cols=217 Identities=27% Similarity=0.512 Sum_probs=182.3
Q ss_pred HHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCc
Q 024452 20 VLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGP 99 (267)
Q Consensus 20 l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P 99 (267)
+|++++|+|.++. ++.+++++++||+||.+|+|+..+.. .+..+|++|+++++++.++||++|..+++.|++.|++|
T Consensus 1 ~~~~~~~~w~~~~--~~~i~i~~l~gGlTN~~~~v~~~~~~-~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P 77 (330)
T PLN02421 1 VCKALFKGWSDLD--DSDFSVERISGGITNLLLKVSVKEEN-GNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGA 77 (330)
T ss_pred CchHhCCccccCC--cCceEEEEeCCcccceEEEEEecCCC-CCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCC
Confidence 4788999999874 48899999999999999999864311 11348999999998888899999999999999999999
Q ss_pred eEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcc--cc---c
Q 024452 100 RLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAK--DA---K 174 (267)
Q Consensus 100 ~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~---~ 174 (267)
++++.+++|+|.+|++|++++..++.++.....+|+.|++||+...+....+.++..+.+|...+....... .. .
T Consensus 78 ~~l~~~~~G~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~ 157 (330)
T PLN02421 78 KLLGVFGNGMIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYE 157 (330)
T ss_pred ceeEEeCCcEeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhc
Confidence 999999888999999999999888889889999999999999998876656789999999998875432111 11 1
Q ss_pred ccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 175 EFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 175 ~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
...+..+.+++..+++.+.....+.||||||++++|||++++++.+.+||||||++|+++||+|.
T Consensus 158 ~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~ 222 (330)
T PLN02421 158 TISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGN 222 (330)
T ss_pred ccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHHHHH
Confidence 12356778888888877766678899999999999999986446799999999999999999886
No 3
>PTZ00296 choline kinase; Provisional
Probab=100.00 E-value=1.7e-36 Score=277.14 Aligned_cols=229 Identities=25% Similarity=0.418 Sum_probs=186.9
Q ss_pred ccccCCCChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCC----CCCceEEEEEcCCCcccccC
Q 024452 6 TELLPSSSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNN----GLARNVLVRIYGEGVEVFFN 81 (267)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~----~~~~~~vlRi~~~~~~~~~d 81 (267)
.+.++.++++.+..+|++++|.|.++. ++.+++.+++||+||.+|+|+.+.+.+ ..+.+|++|+++++++.++|
T Consensus 78 ~~~~~~~~~~~~~~i~~~~vp~W~~~~--~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lId 155 (442)
T PTZ00296 78 QEFSDLTDPLYIKKICLEKVPEWRRFT--EDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYN 155 (442)
T ss_pred HhhcccCChHHHHHHHHHHCCccccCC--cccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeC
Confidence 456788999999999999999999765 367899999999999999998653111 01468999999999999999
Q ss_pred hHHHHHHHHHHHhCCCCceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCC----C--CCCCchhHH
Q 024452 82 RDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKM----P--GPRKALLWD 155 (267)
Q Consensus 82 r~~E~~~~~~l~~~gl~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~----~--~~~~~~~~~ 155 (267)
|..|..+++.|++.|++|++++.+++|+|.+|++|++++..++.++.+..++|+.|++||+... + ....|.+|+
T Consensus 156 R~~E~~v~~~ls~~gi~P~l~~~f~gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~~~~~~f~~~p~~f~ 235 (442)
T PTZ00296 156 PISEFEVYKTMSKYRIAPQLLNTFSGGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFK 235 (442)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEeCCCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccccCchhccCCCcHHH
Confidence 9999999999999999999999999899999999999999899999999999999999999853 2 123456899
Q ss_pred HHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC------CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 156 RLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP------NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 156 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~------~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.+++|...+........ ...++..+.++++++.+.+. ....+.||||||+.++|||..+ +.+.+||||||+
T Consensus 236 ~i~~~~~~~~~~~~~~~-~~~~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL~~~--~~l~LIDfEYAg 312 (442)
T PTZ00296 236 MMEKWKNQLSKYKNIEK-YQRDIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQENNIINTN--KCLRLIDFEYSG 312 (442)
T ss_pred HHHHHHHHHHhhccchH-hHhhHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCCccceeecC--CCEEEEeecccc
Confidence 99999987754322110 01134556666666655442 3466899999999999999864 469999999999
Q ss_pred cchHhHHHHh
Q 024452 230 QNMLNFKRAC 239 (267)
Q Consensus 230 ~~~~~fD~A~ 239 (267)
+++++||+|.
T Consensus 313 ~ndpafDIAn 322 (442)
T PTZ00296 313 YNFLATDIAN 322 (442)
T ss_pred cccHHHHHHH
Confidence 9999999774
No 4
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=255.90 Aligned_cols=237 Identities=28% Similarity=0.481 Sum_probs=201.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHh
Q 024452 15 EELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSS 94 (267)
Q Consensus 15 ~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~ 94 (267)
..++++|..+.|.|.. ..+++..+++|++|..+.+.... .-...+++|+|+..++..+||++|+..++.|+.
T Consensus 66 ~ga~eLlk~Lrp~W~~-----~~v~~~~fs~gitNkL~~~~vg~---~~e~~v~vrvyg~~te~vIdre~Ev~afk~L~a 137 (391)
T KOG4720|consen 66 PGALELLKKLRPHWKP-----PEVTFKRFSDGITNKLFSCYVGE---NMEDHVLVRVYGHNTELVIDRENEVIAFKLLAA 137 (391)
T ss_pred hhHHHHHHHhcccCCc-----cceeeeeeccchhHHHHHhhccc---ccceeEEEEeccCCCceeeccHHHHHHHHHHHH
Confidence 5589999999999994 77899999999999999986432 134789999999999999999999999999999
Q ss_pred CCCCceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCC-CCCchhHHHHHHHHHHHhhccCcc-c
Q 024452 95 QGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPG-PRKALLWDRLRKWVSVAKSFCSAK-D 172 (267)
Q Consensus 95 ~gl~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~-~ 172 (267)
+|++|++|+.+.+|++++||+|+++..+.+.+|.+.+.+|+.||+||+...++ .+.|.+|..+..|+.++.....++ .
T Consensus 138 ~G~ap~Ly~tF~NGLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~g~~pkp~lw~km~~f~~lv~~~f~de~~ 217 (391)
T KOG4720|consen 138 YGFAPKLYGTFNNGLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVATGGNPKPPLWEKMRKFLQLVPTSFEDEIN 217 (391)
T ss_pred cCcChhhhheecCceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccCCCCCCCcHHHHHHHHHHhcCchhhcccc
Confidence 99999999999999999999999999999999999999999999999998763 456789999999998876543322 1
Q ss_pred ----ccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh---------
Q 024452 173 ----AKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC--------- 239 (267)
Q Consensus 173 ----~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~--------- 239 (267)
.+....+.|.+++.+|++.+...+.|.|||||||-++|||.++..+.+.+||||||+||+.+||++-
T Consensus 218 kq~~~~~~~~~~L~~Ei~~l~E~l~~L~sPVVFcHNDLL~~Niiy~~~~~~v~fIDYEYa~yNY~afDIgNHFnE~aGv~ 297 (391)
T KOG4720|consen 218 KQNLFDEPSPEDLGEEISKLKEMLSMLKSPVVFCHNDLLCGNIIYDSEKGSVEFIDYEYAGYNYQAFDIGNHFNEYAGVE 297 (391)
T ss_pred hhhcccCCCHHHHHHHHHHHHHHHHhhCCCeEEeecchhhcceeeccccCcEEEEeecccccchhheehhhhHHhhcCCC
Confidence 1222568899999999999888899999999999999999998777899999999999999999762
Q ss_pred -hhhhheeeeccCCchhHhHHHHHHh
Q 024452 240 -TKILLILTFSVNSPMVCMRWLRILC 264 (267)
Q Consensus 240 -~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (267)
.||.++|.. +.-.-|+|-|.
T Consensus 298 evDYSlyp~r-----E~Q~qwl~~YL 318 (391)
T KOG4720|consen 298 EVDYSLYPTR-----EEQLQWLRDYL 318 (391)
T ss_pred ccchhcCCCH-----HHHHHHHHHHH
Confidence 566666532 33456777764
No 5
>PTZ00384 choline kinase; Provisional
Probab=100.00 E-value=1.4e-34 Score=260.43 Aligned_cols=223 Identities=19% Similarity=0.325 Sum_probs=176.2
Q ss_pred CChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCC--CCceEEEEEcCCCcccccChHHHHHHH
Q 024452 12 SSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNG--LARNVLVRIYGEGVEVFFNRDDEIRTF 89 (267)
Q Consensus 12 ~~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~--~~~~~vlRi~~~~~~~~~dr~~E~~~~ 89 (267)
-+...++.+|++++|.|+++. ++.+++++++||+||.+|+|+.+...+. ....+++|+++.++..++||++|.+++
T Consensus 29 ~~~~~~~~~~~~~~p~w~~~~--~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~ 106 (383)
T PTZ00384 29 HSHSNLKSLCIRHVPFWNNVN--PEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIA 106 (383)
T ss_pred ccHHHHHHHHHHHCCccccCC--cccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHH
Confidence 345789999999999999874 4889999999999999999986431100 012488999988888899999999999
Q ss_pred HHHHhCCCCceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCC---C--CCCchhHHHHHHHHHHH
Q 024452 90 ECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMP---G--PRKALLWDRLRKWVSVA 164 (267)
Q Consensus 90 ~~l~~~gl~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~---~--~~~~~~~~~l~~~~~~~ 164 (267)
+.|++.|++|++++.+++|+|++||+|++++..++.++.+...+|+.|++||+...+ . ...|..+..+..|...+
T Consensus 107 ~~Ls~~glgP~l~~~f~~g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~~~p~~~~~~p~~~~~i~~w~~~~ 186 (383)
T PTZ00384 107 KLLGDNNFGPKIIGRFGDFTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTELVPKEWDRTPMFLTKISTWSQHV 186 (383)
T ss_pred HHHHhCCCCCeEEEecCCEEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhcccccCCCccccCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998532 1 12345677888887665
Q ss_pred hhccCcccccccchhhHHHHHHHHHHhCC-------CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHH
Q 024452 165 KSFCSAKDAKEFCLYTLKDEISMLEKELP-------NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKR 237 (267)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~~~~~l~~~l~-------~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~ 237 (267)
.+..... ...+++..+.++++.+++.+. ....+.||||||++++|||.++ +.+.+||||||++|+++||+
T Consensus 187 ~~~~~~~-~~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHNDL~~gNIL~~~--~~l~lID~EYA~~n~~~fDL 263 (383)
T PTZ00384 187 ERIIKKY-NLDFDYNELVQNYELFKKILNNHLNTSNSITNSVLFCHNDLFFTNILDFN--QGIYFIDFDFAGFNYVGWEI 263 (383)
T ss_pred HHHHHhh-ccccCHHHHHHHHHHHHHHHHHhhccccccccceeeeeccCCcccEEecC--CCEEEEEeccccCCchHhHH
Confidence 4321110 012345556666666544432 1245799999999999999864 47999999999999999997
Q ss_pred Hh
Q 024452 238 AC 239 (267)
Q Consensus 238 A~ 239 (267)
|.
T Consensus 264 An 265 (383)
T PTZ00384 264 AN 265 (383)
T ss_pred HH
Confidence 74
No 6
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=100.00 E-value=1.3e-33 Score=239.22 Aligned_cols=199 Identities=33% Similarity=0.574 Sum_probs=160.7
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECCeeEEEeecCC
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHAR 117 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~~v~e~i~G~ 117 (267)
++++++.+|++|.+|+|+.... ++++|++|++++.+...++|++|..+++.+++.|++|++++..+++++++|++|+
T Consensus 1 ~~i~~l~gG~tN~~~~v~~~~~---~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~~~l~e~i~G~ 77 (235)
T cd05157 1 ITFKRFTGGITNKLVKVSNKED---NQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQNGLIYEFIPGR 77 (235)
T ss_pred CeEEEcCCcccceEEEEEcCCC---CCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeCCcEEEEeeCCC
Confidence 4689999999999999975310 1479999999887777789999999999999999999999888888999999999
Q ss_pred CCCcccCCChHHHHHHHHHHHhhccCCCCCC------CCchhHHHHHHHHHHHhhccCccc-----ccccchhhHHHHHH
Q 024452 118 TLSAADIRDPKISELVAAKMREFHDLKMPGP------RKALLWDRLRKWVSVAKSFCSAKD-----AKEFCLYTLKDEIS 186 (267)
Q Consensus 118 ~l~~~~l~~~~i~~~la~~La~lH~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~ 186 (267)
+++...+.++.+..++|+.|++||+...+.. ..+..++.+..|...+........ ......+.+.+.+.
T Consensus 78 ~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 157 (235)
T cd05157 78 TLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEIS 157 (235)
T ss_pred cCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHH
Confidence 9988878888899999999999999987542 234577888888776543211100 01224567777778
Q ss_pred HHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 187 MLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 187 ~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
++++.+.....+.++||||++++|||++++++.+.+||||+|++|++.||+|+
T Consensus 158 ~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~ 210 (235)
T cd05157 158 WLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDIAN 210 (235)
T ss_pred HHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchheeHHH
Confidence 88877765567899999999999999996235799999999999999999876
No 7
>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=4.1e-33 Score=242.02 Aligned_cols=224 Identities=36% Similarity=0.604 Sum_probs=189.7
Q ss_pred ChHHHHHHHHHhCC-CCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCC---CCCCceEEEEEcCCCcccccChHHHHHH
Q 024452 13 SPEELKKVLQSVAS-DWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKN---NGLARNVLVRIYGEGVEVFFNRDDEIRT 88 (267)
Q Consensus 13 ~~~~~~~l~~~~~p-~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~---~~~~~~~vlRi~~~~~~~~~dr~~E~~~ 88 (267)
....+.++|...+| .|+++.. +..+++.+++|.+|.+|.++.+... .....++++|||+++.. +.+|..|..+
T Consensus 19 ~~~~~~~~~~~~l~~~w~~v~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~-~~~~~~Esv~ 95 (366)
T KOG2686|consen 19 ILPRAKELCAQYLGGAWRDVIN--EEQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVD-FSQRETESVM 95 (366)
T ss_pred ccHHHHHHHHHHhhhHHhhhhh--hhheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCcc-HHHhhhHHHH
Confidence 44668888888886 6999874 6688999999999999999875422 12346899999998765 7788899999
Q ss_pred HHHHHhCCCCceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCc-hhHHHHHHHHHHHhhc
Q 024452 89 FECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKA-LLWDRLRKWVSVAKSF 167 (267)
Q Consensus 89 ~~~l~~~gl~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~-~~~~~l~~~~~~~~~~ 167 (267)
++.++++|++|++++.+++|++.+||+.++++..++.++++...+|+.++++|++.+|.++.+ ..|+.+++|..+..++
T Consensus 96 fa~lSer~lGPkL~G~F~~GR~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~ke~~~~~~~~~~wl~~~~~~ 175 (366)
T KOG2686|consen 96 FAILSERGLGPKLYGFFSGGRFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPGPKEPRSLWERYKKWLKGAKKI 175 (366)
T ss_pred HHHHhhcCCCcceeeecCCccHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCCCccHHHHHHHHHHHHhhhhhc
Confidence 999999999999999999999999999999999999999999999999999999999988776 7999999999988776
Q ss_pred cCccc-----ccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 168 CSAKD-----AKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 168 ~~~~~-----~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
+.... .+.+....+..+++.++++.+..+.+.||||||++.||||+.++.+.+++||||||++|+++||+|.
T Consensus 176 ~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~e~~~~~vvFcHNDlq~gNiL~~~~t~~Lv~IDfEYasyN~r~fDlan 252 (366)
T KOG2686|consen 176 KPTEVSYSCGPDKLEIEDLLLELSLFRKWSELTKSPVVFCHNDLQYGNILLLNSTKELVLIDFEYASYNPRGFDLAN 252 (366)
T ss_pred CCCccchhcccchhhHHHHHHHHHHHHHHHhcCCCCeeeecccccccceeeecCCCceeEEeeccccCCchhhhHHH
Confidence 54331 1222345667777888887744678899999999999999987667899999999999999999874
No 8
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=100.00 E-value=1.4e-31 Score=235.15 Aligned_cols=201 Identities=32% Similarity=0.591 Sum_probs=150.6
Q ss_pred EEEEecCceeeeeEEEEeCCCC--CCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECCeeEEEeecC
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKN--NGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHA 116 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~--~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~~v~e~i~G 116 (267)
++++++||+||.+|+|+..... ...+.+||+|+++......++|.+|.++++.|++.|++|++++.+++++|++|++|
T Consensus 2 ~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~~~v~e~i~G 81 (302)
T cd05156 2 EVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPNGRIEEFIPS 81 (302)
T ss_pred eEEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCCCchhheeCC
Confidence 6899999999999999854200 01247999999988776678999999999999999999999999998899999999
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCC-C----CCchhHHHHHHHHHHHhhccCcc-----cccccchhhHHHHHH
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPG-P----RKALLWDRLRKWVSVAKSFCSAK-----DAKEFCLYTLKDEIS 186 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~-~----~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~ 186 (267)
+++....+.++.+..++|+.|++||+...+. . ..+..+..+..|........... .........+...+.
T Consensus 82 ~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (302)
T cd05156 82 RTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDEA 161 (302)
T ss_pred CcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHHH
Confidence 9988777778889999999999999997753 1 22346667777766543321110 000011222333333
Q ss_pred HHHHhCCC-----CCCcEEEEccCCCCCCeeeeCC---CCCEEEEeecccCcchHhHHHHh
Q 024452 187 MLEKELPN-----DHQEIGFCHNDLQYGNIMIDEE---TSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 187 ~l~~~l~~-----~~~~~~l~H~Dl~~~Nilv~~~---~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
.+.+.+.. ...+.++||||++++|||++++ ++.+.+||||||++|+++||+|.
T Consensus 162 ~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~DlA~ 222 (302)
T cd05156 162 KYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIAN 222 (302)
T ss_pred HHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHHHHH
Confidence 33333321 3478999999999999999863 25799999999999999999775
No 9
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=99.98 E-value=6.6e-32 Score=225.58 Aligned_cols=176 Identities=36% Similarity=0.585 Sum_probs=135.4
Q ss_pred CceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccC
Q 024452 64 ARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDL 143 (267)
Q Consensus 64 ~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~ 143 (267)
+.+|++|+++.++..++||+.|..+++.|++.|++|++++.+++|+|++|++|++++..++.++.+...+|+.|++||+.
T Consensus 2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~~p~~~~~~~~g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~~lH~~ 81 (211)
T PF01633_consen 2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAGLGPKIIYFFENGRVEEFIEGRTLSPEDFRNPEILKRIAKLLAKLHSI 81 (211)
T ss_dssp TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTSSS-EEEEETTEEEEE--SSEE--CGGGGSHHHHHHHHHHHHHHHTH
T ss_pred CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcCCCCeEEEEcCCCcEEEEecccccChhhccChHHHHHHHHHHHHHhhc
Confidence 47999999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCchhHHHHHHHHHHHhhccCc-----ccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCC
Q 024452 144 KM-PGPRKALLWDRLRKWVSVAKSFCSA-----KDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEET 217 (267)
Q Consensus 144 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~ 217 (267)
.. +....+.+++.+..|.......... .......+..+.++++.+++.+.....+.||||||++++|||++.++
T Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil~~~~~ 161 (211)
T PF01633_consen 82 PISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNILINNKD 161 (211)
T ss_dssp HHTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEEETSSS
T ss_pred ccccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCccccEEeccCC
Confidence 87 4444567899999993222211111 00112245677888888888776677889999999999999993335
Q ss_pred CCEEEEeecccCcchHhHHHHh
Q 024452 218 SSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 218 ~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
+.+.+||||||++|+++||+|.
T Consensus 162 ~~~~lIDfEya~~n~~~fDia~ 183 (211)
T PF01633_consen 162 GEVKLIDFEYAGYNDRAFDIAN 183 (211)
T ss_dssp SCEEE--GTT-EEEEHHHHHHH
T ss_pred CeEEEecHHHHhhccchhhHHH
Confidence 7899999999999999999886
No 10
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=99.97 E-value=3.1e-30 Score=221.60 Aligned_cols=182 Identities=13% Similarity=0.105 Sum_probs=142.8
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccc-cChHHHHHHHHHHHhCCCCceEEEEECCeeEEEeecCCCC
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVF-FNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTL 119 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~~~v~e~i~G~~l 119 (267)
.++++|.+|.+|+++. ++.+||+|++++....+ +||++|.++++.+++.|++|++++.+++++|++||+|+++
T Consensus 2 ~~~~~G~tn~~y~~~~------~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~~~~v~e~i~G~~~ 75 (256)
T TIGR02721 2 QTLSGGLTNRSWRIEH------PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNEHWLLVEWLEGEVI 75 (256)
T ss_pred CcCCCcCcCCeEEEEe------CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeCCEEEEEeccCccc
Confidence 4678999999999974 24799999987765554 7999999999999999999999999988899999999999
Q ss_pred CcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcE
Q 024452 120 SAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEI 199 (267)
Q Consensus 120 ~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~ 199 (267)
+...+.++....++|+.|++||+.+.+... .++...+..|..++.... ..+.+...++.+.......+.+.
T Consensus 76 ~~~~~~~~~~~~~la~~l~~lH~~~~~~~~-~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 146 (256)
T TIGR02721 76 TLDQFVALDLLLELAALLHQLHSQPRFGYP-LSLKARIAHYWLQIDPAR--------RTPEWLRLYKQFRSAPEPAPLPL 146 (256)
T ss_pred ccccccCchhHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHHhccccc--------CChHHHHHHHHHHhccCCCCCCC
Confidence 877666778899999999999999875432 345566666665442210 01233334444444333345688
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
++||||++++|||++++ +++|||||+|++|+++||+|.
T Consensus 147 ~l~H~Dl~~~Nil~~~~--~~~lIDwE~a~~gdp~~DLa~ 184 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQ--GLKLIDWEYASDGDIALELAA 184 (256)
T ss_pred eeecCCCCcCcEEEeCC--CCEEEeccccCcCCHHHHHHH
Confidence 99999999999999864 489999999999999999886
No 11
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.93 E-value=1.3e-24 Score=174.64 Aligned_cols=163 Identities=28% Similarity=0.376 Sum_probs=130.7
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC--CeeEEEeecC
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DGRVEEFIHA 116 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~~v~e~i~G 116 (267)
.++++.+|.+|.+|+++.. +++|++|++.++.....+++.|+.+++.+++.+++|+++..+. ..+|++|++|
T Consensus 2 ~~~~l~~G~~~~vy~~~~~------~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G 75 (170)
T cd05151 2 HISPLKGGMTNKNYRVEVA------NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEG 75 (170)
T ss_pred ceeecCCcccCceEEEEEC------CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCC
Confidence 5889999999999999853 4799999987665445677899999999999999999999876 4499999999
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
+++.......+....++++.|++||+...+
T Consensus 76 ~~l~~~~~~~~~~~~~l~~~l~~LH~~~~~-------------------------------------------------- 105 (170)
T cd05151 76 SELLTEDFSDPENLEKIAKLLKKLHSSPLP-------------------------------------------------- 105 (170)
T ss_pred CccccccccCHHHHHHHHHHHHHHhCCCCC--------------------------------------------------
Confidence 988765455667788999999999997542
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhhhheeeeccCCchhHhHHHHHHhh
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKILLILTFSVNSPMVCMRWLRILCL 265 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (267)
+.++||||++++|||+++ +.+.+||||+|+++++.+|+|.+- ...+.+..+ ...++.-|+.
T Consensus 106 -~~~~~HgD~~~~Nil~~~--~~~~liDf~~a~~~~~~~Dla~~~----~~~~~~~~~-~~~~~~~y~~ 166 (170)
T cd05151 106 -DLVPCHNDLLPGNFLLDD--GRLWLIDWEYAGMNDPLFDLANFF----SEAKLSEDQ-EEELLEAYFG 166 (170)
T ss_pred -CceeecCCCCcCcEEEEC--CeEEEEecccccCCChHHHHHHHH----HhcCCCHHH-HHHHHHHHhC
Confidence 778999999999999983 579999999999999999987632 122222222 5556666654
No 12
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.92 E-value=1e-23 Score=176.19 Aligned_cols=190 Identities=16% Similarity=0.205 Sum_probs=138.1
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCC-CceEEEEECC-------e
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQ-GPRLLGRFGD-------G 108 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl-~P~v~~~~~~-------~ 108 (267)
+++++.+|.+|.+|+|+.. ++..|++|+...... ...+..+|+++++.+++.|+ +|+++....+ .
T Consensus 2 ~~~~l~~G~~n~~~~v~~~-----~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~ 76 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAG-----GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPF 76 (223)
T ss_pred cceecCCCccceEEEEEec-----CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCce
Confidence 5788999999999999863 247999999876532 23345799999999999987 7999887653 3
Q ss_pred eEEEeecCCCCCcccC---CC----hHHHHHHHHHHHhhccCCCCCCCC-------chhHHHHHHHHHHHhhccCccccc
Q 024452 109 RVEEFIHARTLSAADI---RD----PKISELVAAKMREFHDLKMPGPRK-------ALLWDRLRKWVSVAKSFCSAKDAK 174 (267)
Q Consensus 109 ~v~e~i~G~~l~~~~l---~~----~~i~~~la~~La~lH~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~ 174 (267)
+|++|++|.++..... .+ ..++.++|+.|++||+...+.... ......+..|...+.+....
T Consensus 77 ~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 152 (223)
T cd05154 77 YVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTD---- 152 (223)
T ss_pred EEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccc----
Confidence 8999999998876432 12 246889999999999987643211 12445666676655433211
Q ss_pred ccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCC-CCCEEEEeecccCcchHhHHHHhh
Q 024452 175 EFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEE-TSSITIIVSFTFLQNMLNFKRACT 240 (267)
Q Consensus 175 ~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~-~~~v~lIDwE~a~~~~~~fD~A~~ 240 (267)
....+....+++++... ...+.++||||++++|||++++ ++.++|||||+|++|++.||+|.+
T Consensus 153 --~~~~~~~~~~~~~~~~~-~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~ 216 (223)
T cd05154 153 --EPPAMERLLRWLEAHLP-ADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWL 216 (223)
T ss_pred --ccHHHHHHHHHHHhhCC-CCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHHHHH
Confidence 11344555566665543 2368999999999999999873 245789999999999999998764
No 13
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.92 E-value=3.3e-24 Score=180.75 Aligned_cols=176 Identities=16% Similarity=0.158 Sum_probs=121.8
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCC-CceEEEEECC----eeEEEe
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQ-GPRLLGRFGD----GRVEEF 113 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl-~P~v~~~~~~----~~v~e~ 113 (267)
.+++|.+|.||.+|+.. ++++|+|++.+... ..+..+|+++++.++..|+ +|++++..++ ++|++|
T Consensus 5 ~~~~i~~G~t~~~y~~~--------~~~~VlR~~~~~~~-~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~ 75 (226)
T TIGR02172 5 DWTQTGEGGNGESYTHK--------TGKWMLKLYNPGFD-KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYEL 75 (226)
T ss_pred HheeecCCCCcceeEec--------CCCEEEEeCCCCCC-HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeee
Confidence 45789999999999852 36899999876542 2234689999999999998 6999998653 589999
Q ss_pred ecCCCCCcccCC-----ChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHH-HH
Q 024452 114 IHARTLSAADIR-----DPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEI-SM 187 (267)
Q Consensus 114 i~G~~l~~~~l~-----~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~ 187 (267)
|+|++.....+. .+.+...+|+.+++||+.+.+....+...+.+..+++ +... ....+.+.+ +.
T Consensus 76 i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~---~~~~-------~~~~~~~~l~~~ 145 (226)
T TIGR02172 76 IVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIE---EKDF-------VPKDYKEKARAF 145 (226)
T ss_pred cCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHH---hccC-------CCHHHHHHHHHH
Confidence 999852211111 1357889999999999987654322233333333332 1110 011122222 22
Q ss_pred HHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 188 LEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 188 l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
+. ..+.+.++||||++++|||++++ + ++|||||+|++|++.+|+|.
T Consensus 146 l~----~~~~~~~~~HgD~~~~Nii~~~~-~-~~iIDwe~a~~Gdp~~Dla~ 191 (226)
T TIGR02172 146 IK----EVPDTSTCLHGDFQIGNLITSGK-G-TYWIDLGDFGYGNPLFDLGL 191 (226)
T ss_pred HH----hCCCCCceEecCCCCCcEEEcCC-C-cEEEechhcCcCCHHHHHHH
Confidence 22 22455678999999999999863 4 99999999999999999887
No 14
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=99.91 E-value=3.7e-23 Score=181.12 Aligned_cols=227 Identities=14% Similarity=0.093 Sum_probs=142.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHh
Q 024452 15 EELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSS 94 (267)
Q Consensus 15 ~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~ 94 (267)
+++..++..+-. .+..++.++.+|.+|.+|++.+. ++++|+|++...... +...|++++++|++
T Consensus 2 ~~l~~~l~~y~~--------~~~~~i~~i~~G~~n~~y~v~~~------~~~~vLr~~~~~~~~--~~~~e~~~l~~L~~ 65 (296)
T cd05153 2 EELASFLADYDL--------GELLSFEGISAGIENTNYFVTTD------SGRYVLTLFEKVSAE--ELPFFLALLDHLAE 65 (296)
T ss_pred HHHHHHHHHcCC--------CchhheecccCccccceEEEEeC------CCcEEEEEcCCCChH--hccHHHHHHHHHHH
Confidence 455555555521 14467999999999999999753 368999998753222 23589999999999
Q ss_pred CCC-CceEEEEEC--------C--eeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHH
Q 024452 95 QGQ-GPRLLGRFG--------D--GRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSV 163 (267)
Q Consensus 95 ~gl-~P~v~~~~~--------~--~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~ 163 (267)
.|+ +|+++.... + ..|++|++|+.+.. .++....++|+.|++||........... ......|...
T Consensus 66 ~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G~~~~~---~~~~~~~~lg~~La~lH~~~~~~~~~~~-~~~~~~~~~~ 141 (296)
T cd05153 66 RGLPVPRPIADRDGEYLSELAGKPAALVEFLAGEHLTR---PTAAHCRQIGEALARLHLAAQSFPGERN-NLRGLAWIRE 141 (296)
T ss_pred CCCCCCccccCCCCcEeeeeCCceEEEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHhccCCccCC-CcCCcHHHHH
Confidence 996 588776422 1 17899999998765 3467789999999999998653321100 0011123322
Q ss_pred HhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhhh
Q 024452 164 AKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKIL 243 (267)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~~ 243 (267)
........ ...-....+...++.+++. .....+.++||||++++|+|++++ +.++|||||+|++|++.||+|.+-..
T Consensus 142 ~~~~~~~~-l~~~~~~~~~~~~~~l~~~-~~~~~~~~l~HgD~~~~Nil~~~~-~~~~iIDfe~a~~g~~~~Dla~~~~~ 218 (296)
T cd05153 142 LGKDLLPL-LSAEDRALLADELARQDAF-DPSDLPRGVIHADLFRDNVLFDGD-ELSGVIDFYFACTDAFLYDLAITLND 218 (296)
T ss_pred HHHHhccc-cCHHHHHHHHHHHHHHHhh-hhhcCCCcCCccCcCcccEEEeCC-ceEEEeehhhhcCchHHHHHHHHHHH
Confidence 21111000 0000123344445555543 223567899999999999999963 45689999999999999997753221
Q ss_pred -heeeeccCCchhHhHHHHHHh
Q 024452 244 -LILTFSVNSPMVCMRWLRILC 264 (267)
Q Consensus 244 -~~~~~~~~~~~~~~~~~~~~~ 264 (267)
++.....-.......++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~l~gY~ 240 (296)
T cd05153 219 WCFDEDGALDPERAQALLAGYQ 240 (296)
T ss_pred HHhCccCCCCHHHHHHHHHHHH
Confidence 121111112233556677775
No 15
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=99.90 E-value=2.2e-22 Score=171.54 Aligned_cols=196 Identities=14% Similarity=0.100 Sum_probs=130.6
Q ss_pred EEEEecCcee-eeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEe
Q 024452 39 QVIPLKGAMT-NEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEF 113 (267)
Q Consensus 39 ~i~~l~~G~~-N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~ 113 (267)
++.+|+.|.+ |.+|++... +.++++|+..... ..+..+|+++++.+++.+.+|+++...+. .+|++|
T Consensus 2 ~~~~~~~g~~~~~v~~~~~~------~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~ 73 (244)
T cd05150 2 RWERVTEGQSGATVYRLDGK------NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSA 73 (244)
T ss_pred cceecCCCCCcCeEEEEcCC------CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEe
Confidence 4567877776 899999632 3689999975543 22446899999999988778999998753 389999
Q ss_pred ecCCCCCccc--CCChHHHHHHHHHHHhhccCCCCCCCCch-hHHHHHHHHHHHhhccCccc-cc-ccchhhHHHHHHHH
Q 024452 114 IHARTLSAAD--IRDPKISELVAAKMREFHDLKMPGPRKAL-LWDRLRKWVSVAKSFCSAKD-AK-EFCLYTLKDEISML 188 (267)
Q Consensus 114 i~G~~l~~~~--l~~~~i~~~la~~La~lH~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~l~~~~~~l 188 (267)
++|+++.... ...+.+..++|+.+++||+++.+...... ....+..+...+.+...... .. ........+..+++
T Consensus 74 i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 153 (244)
T cd05150 74 VPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAEL 153 (244)
T ss_pred eCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHH
Confidence 9999886533 33356899999999999998764322111 11222222221111100000 00 00011234444555
Q ss_pred HHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhhhh
Q 024452 189 EKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKILL 244 (267)
Q Consensus 189 ~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~~~ 244 (267)
.+... ...+.+|||||++++|||+++ ++.++|||||+|++|++.+|+|.+-..+
T Consensus 154 ~~~~~-~~~~~~l~HgD~~~~Nil~~~-~~~~~iIDwe~a~~gdp~~Dla~~~~~~ 207 (244)
T cd05150 154 EATRP-AEEDLVVTHGDACLPNIIVDP-GKFSGFIDLGRLGVADRYQDLALAVRSL 207 (244)
T ss_pred HhhCC-CcCceEEECCCCCCccEEEeC-CcEEEEEEccccccccHHHHHHHHHHHh
Confidence 54432 356799999999999999997 3557899999999999999988755443
No 16
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=99.90 E-value=3e-22 Score=176.51 Aligned_cols=209 Identities=18% Similarity=0.195 Sum_probs=137.3
Q ss_pred CChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHH
Q 024452 12 SSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFEC 91 (267)
Q Consensus 12 ~~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~ 91 (267)
-+++++.+++..+ ++ .+..++.++.+|.+|.+|+|++. +++||+|++...... -....|.+++++
T Consensus 7 ~~~~~l~~~l~~y-----~~---~~~~~i~~~~~G~~n~~y~v~t~------~~~~vLK~~~~~~~~-~~i~~e~~~l~~ 71 (307)
T TIGR00938 7 VSDEEMSSFLDGY-----DL---GELLSLKGIAEGVENSNYLLTTD------VGRYILTLYEKRVKA-EELPFFLALTTH 71 (307)
T ss_pred CCHHHHHHHHHhc-----CC---CCceeccccCCccccceEEEEeC------CCcEEEEEecCCCCH-HHHHHHHHHHHH
Confidence 4568888888866 22 14568999999999999999853 368999998653211 112478899999
Q ss_pred HHhCCC-CceEEEEEC-------Ce---eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHH
Q 024452 92 MSSQGQ-GPRLLGRFG-------DG---RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKW 160 (267)
Q Consensus 92 l~~~gl-~P~v~~~~~-------~~---~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~ 160 (267)
|++.|+ +|+++.... +| .+++|++|+.+... ++...+++|+.||+||..................|
T Consensus 72 L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~---~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w 148 (307)
T TIGR00938 72 LAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGRP---TAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAW 148 (307)
T ss_pred HHHCCCCCCccccCCCCCeehhcCCeEEEEEEeCCCCCCCCC---CHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHH
Confidence 999997 588876432 12 68999999887642 45668999999999999865332111100012334
Q ss_pred HHHHhhccCccc-ccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 161 VSVAKSFCSAKD-AKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 161 ~~~~~~~~~~~~-~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
............ .+.-....+.+.++.+.... ....+.++||||++++||+++++ +.+.|||||+|+++++.||+|.
T Consensus 149 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~-~~~~~~~l~HgD~~~~Nvl~~~~-~~~~vIDfd~~~~~~~~~DLA~ 226 (307)
T TIGR00938 149 HILAEKCFEAAPQLEAHMGAELDKELDYLDKFW-PRDLPRGVIHADLFPDNVLFDGD-SVKGVIDFYFACTDARAYDLAI 226 (307)
T ss_pred HHHHHhhhhcccccCHHHHHHHHHHHHHHHhhh-hhcCCCccCCCCCCcCcEEEECC-ceEEEeecccccCcchHHHHHH
Confidence 322211100000 00001223344445454322 23567899999999999999874 4468999999999999999776
Q ss_pred h
Q 024452 240 T 240 (267)
Q Consensus 240 ~ 240 (267)
+
T Consensus 227 ~ 227 (307)
T TIGR00938 227 T 227 (307)
T ss_pred H
Confidence 4
No 17
>PRK05231 homoserine kinase; Provisional
Probab=99.89 E-value=4.6e-22 Score=176.07 Aligned_cols=207 Identities=15% Similarity=0.149 Sum_probs=132.7
Q ss_pred CChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHH
Q 024452 12 SSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFEC 91 (267)
Q Consensus 12 ~~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~ 91 (267)
.+++++.++++.+ . .. +..+++++.+|..|.+|+|++. +++||+|++...... ....|..++++
T Consensus 7 ls~~~l~~~l~~y-~-~~------~~~~~~~l~~G~~n~~y~v~t~------~g~~vLK~~~~~~~~--~l~~~~~~l~~ 70 (319)
T PRK05231 7 VSDDELAAFLAPY-D-LG------ELLSLKGIAEGIENSNFFLTTT------QGEYVLTLFERLTAE--DLPFFLGLMQH 70 (319)
T ss_pred CCHHHHHHHHHhc-C-Cc------hhhccchhccccccceEEEEeC------CCcEEEEEeccCChH--HhHHHHHHHHH
Confidence 4677788888554 2 11 3457889999999999999853 368999998622211 22468899999
Q ss_pred HHhCCC-CceEEEEEC-------Ce---eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHH
Q 024452 92 MSSQGQ-GPRLLGRFG-------DG---RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKW 160 (267)
Q Consensus 92 l~~~gl-~P~v~~~~~-------~~---~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~ 160 (267)
|++.|+ +|+++.... +| .+++|++|+.... .++..++++|+.||+||...............+..|
T Consensus 71 L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~---~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~ 147 (319)
T PRK05231 71 LAARGVPVPAPVARRDGAALGELAGKPAAIVTFLEGKWPRA---PTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWW 147 (319)
T ss_pred HHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEecCCCCCCC---CCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHH
Confidence 999997 588875321 12 7899999987653 245668899999999999865432111000112223
Q ss_pred HHHHhhccCcccccccchhhHHHHHHHHHHhCCC---CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHH
Q 024452 161 VSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN---DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKR 237 (267)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~---~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~ 237 (267)
.....+...... .-....+...++.+.+.+.. ...+.++||||++++|||+++ ++.++|||||+|+++++.||+
T Consensus 148 ~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~-~~~~~iIDf~~~~~~~~~~Dl 224 (319)
T PRK05231 148 RELAPRLLPFLA--DEQAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEG-DRLSGFIDFYFACNDKLLYDV 224 (319)
T ss_pred HHHHHHHhhccC--hhHHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEEC-CceEEEEecccccCCchHHHH
Confidence 222222110000 00012233333333333321 236789999999999999985 344589999999999999997
Q ss_pred Hhh
Q 024452 238 ACT 240 (267)
Q Consensus 238 A~~ 240 (267)
|.+
T Consensus 225 A~~ 227 (319)
T PRK05231 225 AIT 227 (319)
T ss_pred HHH
Confidence 743
No 18
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.88 E-value=1.4e-22 Score=170.22 Aligned_cols=195 Identities=21% Similarity=0.247 Sum_probs=119.9
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCC-CceEEEEEC----Ce---eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQ-GPRLLGRFG----DG---RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl-~P~v~~~~~----~~---~v 110 (267)
+++++++|.+|.+|+|+.. ++++++|++... ........|..++++|++.|+ +|+++.... .+ .+
T Consensus 1 ~i~~l~~G~~n~~~~v~~~------~~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~ 73 (239)
T PF01636_consen 1 HIRPLSGGFSNRVYRVTTD------DGRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLL 73 (239)
T ss_dssp -EEEEEESSSSEEEEEEET------TSEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEE
T ss_pred CCccCCCCCeeeEEEEEEC------CcEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEE
Confidence 4789999999999999853 369999998765 112223589999999999998 799998432 22 78
Q ss_pred EEeecCCCCCc--ccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHH-HHHHHHHHhhccCccccccc-chhhHHH-HH
Q 024452 111 EEFIHARTLSA--ADIRDPKISELVAAKMREFHDLKMPGPRKALLWDR-LRKWVSVAKSFCSAKDAKEF-CLYTLKD-EI 185 (267)
Q Consensus 111 ~e~i~G~~l~~--~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~-~~~~l~~-~~ 185 (267)
++|++|.++.. ..-..+.++.++|+.|++||+...+.......... ...+................ ....+.. .+
T Consensus 74 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (239)
T PF01636_consen 74 MEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLL 153 (239)
T ss_dssp EEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred EEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHH
Confidence 99999988766 11112467899999999999996432221111110 11111110000000000000 1223333 34
Q ss_pred HHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhh
Q 024452 186 SMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTK 241 (267)
Q Consensus 186 ~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~ 241 (267)
+.+.+.... ..+.++||||++++|||++++++.++|||||+++++++.||.|.+-
T Consensus 154 ~~~~~~~~~-~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~ 208 (239)
T PF01636_consen 154 QELEALLPK-PLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLL 208 (239)
T ss_dssp HHHHHHHHC-CSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHH
T ss_pred HHHHhhhcc-CCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHH
Confidence 455444322 5889999999999999999434556899999999999999977643
No 19
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=99.88 E-value=1.6e-21 Score=165.40 Aligned_cols=186 Identities=15% Similarity=0.122 Sum_probs=121.3
Q ss_pred EEEe-cCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhC-CC-CceEEEEECC-------ee
Q 024452 40 VIPL-KGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQ-GQ-GPRLLGRFGD-------GR 109 (267)
Q Consensus 40 i~~l-~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~-gl-~P~v~~~~~~-------~~ 109 (267)
+.++ .||.+|.+|++. ..+|+|++..... ..+..+|.+++++|++. ++ .|+++...+. +.
T Consensus 2 ~~~~~~gG~~n~vy~~~---------~~~VlR~~~~~~~-~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~ 71 (235)
T cd05155 2 IEPVDSGGTDNATFRLG---------DDMSVRLPSAAGY-AGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWS 71 (235)
T ss_pred ceeccCCCcccceEEcC---------CceEEEcCCccch-HHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceE
Confidence 4566 489999999992 5799999765322 22446899999999975 55 6998886542 37
Q ss_pred EEEeecCCCCCcccCCCh-HHHHHHHHHHHhhccCCCCCCCC---chhHH--HHHHHHHHHhhccCcccccccchhhHHH
Q 024452 110 VEEFIHARTLSAADIRDP-KISELVAAKMREFHDLKMPGPRK---ALLWD--RLRKWVSVAKSFCSAKDAKEFCLYTLKD 183 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~-~i~~~la~~La~lH~~~~~~~~~---~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 183 (267)
+++|++|+++....+.++ .+..++|+.|++||+.+.+.... ...+. .+..|.....+..... ...++...+..
T Consensus 72 l~~~i~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~ 150 (235)
T cd05155 72 VYRWLEGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEAL-EGVIDVDAARA 150 (235)
T ss_pred EEEeecCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHc-ccccChHHHHH
Confidence 899999999976655543 57899999999999987643211 11110 1222222110000000 00011122333
Q ss_pred HHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 184 EISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 184 ~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
.++.+.+. ....+.+|||||++++|||+++ ++..+||||++|++|++++|+|.
T Consensus 151 ~~~~~~~~--~~~~~~~l~HGD~~~~Nvlv~~-~~i~giIDw~~a~~gDp~~Dla~ 203 (235)
T cd05155 151 LWEAALRA--PWWGPPVWFHGDLAPGNLLVQD-GRLSAVIDFGCLGVGDPACDLAI 203 (235)
T ss_pred HHHHHhcc--cccCCceEEeCCCCCCcEEEEC-CCEEEEEeCcccCcCChHHHHHH
Confidence 33333222 1236789999999999999985 34457999999999999999886
No 20
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=99.86 E-value=2.7e-20 Score=162.62 Aligned_cols=223 Identities=17% Similarity=0.136 Sum_probs=154.0
Q ss_pred CCCChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcC--CCcccccChHHHHH
Q 024452 10 PSSSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYG--EGVEVFFNRDDEIR 87 (267)
Q Consensus 10 ~~~~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~--~~~~~~~dr~~E~~ 87 (267)
...+...+..+++..+|+|.+ ...+..+++|++|.+|.+..+ +++|+||.+. ...+...+..+|++
T Consensus 6 ~~~~~~~l~~~l~~~ip~~~~------~~~v~~~~~G~sn~t~~~~~~------~~~~vlR~P~~~~~~~~~~~~~re~~ 73 (321)
T COG3173 6 VALDIAALAAYLRSQIPGYAG------LLIVEEISGGWSNDTFRLGDT------GQKYVLRKPPRGDPVESAHDEKREYR 73 (321)
T ss_pred ccCCHHHHHHHHHhhCcCcCC------CceeeeccCCcccceEEEecC------CceEEEecCCccccchhhhHHHhHHH
Confidence 345678899999999999985 457777899999999999632 5899999553 22334455678999
Q ss_pred HHHHHHhCCC-CceEEEEEC--C----eeEEEeecCCCCCcccCC---ChHHHH-HHHHHHHhhccCCCCC---CCCch-
Q 024452 88 TFECMSSQGQ-GPRLLGRFG--D----GRVEEFIHARTLSAADIR---DPKISE-LVAAKMREFHDLKMPG---PRKAL- 152 (267)
Q Consensus 88 ~~~~l~~~gl-~P~v~~~~~--~----~~v~e~i~G~~l~~~~l~---~~~i~~-~la~~La~lH~~~~~~---~~~~~- 152 (267)
+++.+....+ +|+.++... . ..|++|++|+.+...... ...... .+++.|+.||+++.-+ ...++
T Consensus 74 ~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~ 153 (321)
T COG3173 74 VIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNA 153 (321)
T ss_pred HHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCc
Confidence 9998888754 477877754 3 279999999755442211 124555 9999999999997421 11222
Q ss_pred -hHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcc
Q 024452 153 -LWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQN 231 (267)
Q Consensus 153 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~ 231 (267)
...++..|........... ....+.+.....+++........+.+++|||++++|+|++++ +.+.|||||.+++|
T Consensus 154 ~~~rql~~~~~~~~~~~~~~---~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~-~~~gVlDwe~~~lG 229 (321)
T COG3173 154 YRGRQLARWDDEYRRAKKEL---GGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPG-RPTGVLDWELATLG 229 (321)
T ss_pred cccchhhHHHHHHHHHHHhc---cCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCC-CeeEEEeccccccC
Confidence 3345555655442111000 012345555667777765546788999999999999999984 56999999999999
Q ss_pred hHhHHHHhhhhhheeee
Q 024452 232 MLNFKRACTKILLILTF 248 (267)
Q Consensus 232 ~~~fD~A~~~~~~~~~~ 248 (267)
++..|++-.-+.++...
T Consensus 230 DP~~Dl~~~~W~~~~~~ 246 (321)
T COG3173 230 DPLEDLAIICWTIFDEP 246 (321)
T ss_pred CcHHHHHHHHhccccch
Confidence 99999443215555433
No 21
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=99.85 E-value=2.7e-20 Score=167.82 Aligned_cols=237 Identities=16% Similarity=0.135 Sum_probs=150.3
Q ss_pred ChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-------ccccCh-HH
Q 024452 13 SPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-------EVFFNR-DD 84 (267)
Q Consensus 13 ~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-------~~~~dr-~~ 84 (267)
+.+++.+++....+.+.. .+..+++++++|..|.+|+|+..+ .++++|||...+.. ....+| ..
T Consensus 8 ~~~~v~~yl~~~~~~~~~----~~~~~~~elggGn~N~VyrV~~~~----g~~svIVKqa~p~~r~~g~~wpl~~eR~~~ 79 (401)
T PRK09550 8 TEEDAVEYAALKLGLFDP----KALLTAREIGDGNLNLVFRVSDTE----GGKSVIVKQALPYVRVVGESWPLTLDRARI 79 (401)
T ss_pred CHhHHHHHHHHhcCCCCC----cccceeeEcCCCceEEEEEEEeCC----CCeEEEEEecCcccccccccccccHHHHHH
Confidence 567899999666565543 366889999999999999998542 12489999854321 122344 57
Q ss_pred HHHHHHHHHhC--CCCceEEEEECCe--eEEEeecCCCCCcc----cCCChHHHHHHHHHHHhhccCCCCCC--C--Cch
Q 024452 85 EIRTFECMSSQ--GQGPRLLGRFGDG--RVEEFIHARTLSAA----DIRDPKISELVAAKMREFHDLKMPGP--R--KAL 152 (267)
Q Consensus 85 E~~~~~~l~~~--gl~P~v~~~~~~~--~v~e~i~G~~l~~~----~l~~~~i~~~la~~La~lH~~~~~~~--~--~~~ 152 (267)
|.++++.+++. +.+|+||+++++. +||||+++.+.-.. .-..|.+.+++|+.|+++|-...... . ...
T Consensus 80 Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME~L~~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd~~~~~~~~~~ 159 (401)
T PRK09550 80 EAEALKIQAKYVPDLVPKVYHYDEELAVTVMEDLSDHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSDFGLSSEEKKA 159 (401)
T ss_pred HHHHHHHHHhhCCCCCCeEEEECCCCCEEEEecCCCccHHHHHHhcCCccHHHHHHHHHHHHHHHhccchhhcChhhhhh
Confidence 88999888775 4689999998753 99999998543211 12236789999999999885432210 0 000
Q ss_pred hHH-----HHHH----------HHHHHhhccCcc-c--ccc-cchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeee
Q 024452 153 LWD-----RLRK----------WVSVAKSFCSAK-D--AKE-FCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMI 213 (267)
Q Consensus 153 ~~~-----~l~~----------~~~~~~~~~~~~-~--~~~-~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv 213 (267)
..+ .+.+ |++.......+. + .+. +.-..|..++..|+..+. ..+.+++|||+|+||||+
T Consensus 160 ~~~~f~N~~l~~ite~lvft~P~~~~~~n~~~p~l~~~~~~l~~d~~L~~~~~~L~~~~~--~~~~~l~HgDl~~gni~~ 237 (401)
T PRK09550 160 LVAKFTNPELCKITEDLVFTDPYFDHETNNFEPELEPEVEELRADKELKLEVAKLKHKFL--TKAEALLHGDLHTGSIFV 237 (401)
T ss_pred HHhhcCCHHHhhhhHhhccccchhhhhhccCChhhHHHHHHHHhCHHHHHHHHHHHHHHh--cCCCceeeccCCcccEEe
Confidence 000 0000 111110000000 0 000 011344555666665543 457789999999999999
Q ss_pred eCCCCCEEEEeecccCcchHhHHHH-hhhhhheeeeccC-----CchhHhHHHH
Q 024452 214 DEETSSITIIVSFTFLQNMLNFKRA-CTKILLILTFSVN-----SPMVCMRWLR 261 (267)
Q Consensus 214 ~~~~~~v~lIDwE~a~~~~~~fD~A-~~~~~~~~~~~~~-----~~~~~~~~~~ 261 (267)
.++ .+.+||||+|.+|+++||++ ++..+++.++++. ....+..|+.
T Consensus 238 ~~~--~~~viD~E~a~~G~~~~Dlg~~lanl~~~~~~~~~~~~~~~~~~~~~~~ 289 (401)
T PRK09550 238 TEE--ETKVIDPEFAFYGPIGFDIGTFIANLLLNYCSQPGLLGPREAAFREWLL 289 (401)
T ss_pred eCC--CcEEEeccccccCChHHHHHHHHHHHHHHHhcCcccccchhHHHHHHHH
Confidence 863 68999999999999999944 4555566776642 3334666764
No 22
>PRK12396 5-methylribose kinase; Reviewed
Probab=99.85 E-value=1.5e-20 Score=168.05 Aligned_cols=237 Identities=14% Similarity=0.152 Sum_probs=157.4
Q ss_pred ChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCC------CcccccCh-HHH
Q 024452 13 SPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGE------GVEVFFNR-DDE 85 (267)
Q Consensus 13 ~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~------~~~~~~dr-~~E 85 (267)
+.+++.+++.+..+.+.. .+.+++.+|++|..|.||+|..+. .+++++||...+ ++..-.+| ..|
T Consensus 11 ~~~~v~~yl~~~l~~~~~----~~~~~~~eigdGnlN~VfrV~~~~----~~~svIVKQAlp~vRv~~swpL~~~R~~~E 82 (409)
T PRK12396 11 EANDVIVYVKEKLSKFEH----AKGLQCKEIGDGNLNYVFRVWDEQ----KNISVIVKQAGDTARISDEFKLSTNRIRIE 82 (409)
T ss_pred CHhHHHHHHHHhcCCCCC----cccceeeEcCCCceEEEEEEeeCC----CCceEEEEeccHhhccCCCCCCChHHHHHH
Confidence 567888998887664443 467889999999999999997531 136888876532 23334556 579
Q ss_pred HHHHHHHHhC--CCCceEEEEECCe--eEEEeecCCCCCccc----CCChHHHHHHHHHHHhhccCCCCCCC--------
Q 024452 86 IRTFECMSSQ--GQGPRLLGRFGDG--RVEEFIHARTLSAAD----IRDPKISELVAAKMREFHDLKMPGPR-------- 149 (267)
Q Consensus 86 ~~~~~~l~~~--gl~P~v~~~~~~~--~v~e~i~G~~l~~~~----l~~~~i~~~la~~La~lH~~~~~~~~-------- 149 (267)
.++++.+++. +.+|++|+++++. .|||+++...+-+.. ...|.++.++|+.|++.|-......-
T Consensus 83 ~~aL~~~~~~~P~~VP~vy~~D~e~~~~vMEdL~~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd~~l~~~~kk~~ 162 (409)
T PRK12396 83 SDVLQLEEELAPGLVPKVYLFDSVMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNHKEKKEL 162 (409)
T ss_pred HHHHHHHHhhCCCcCCeEEEECcHHhhHHHHhCcccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcchhccChHHHHHh
Confidence 9999998886 5689999999754 889999764432222 23478899999999998875432110
Q ss_pred -----CchhHHHHH------HHHHHHhh--ccCcc-c--cccc-chhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCee
Q 024452 150 -----KALLWDRLR------KWVSVAKS--FCSAK-D--AKEF-CLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIM 212 (267)
Q Consensus 150 -----~~~~~~~l~------~~~~~~~~--~~~~~-~--~~~~-~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil 212 (267)
.+.+.+-.+ -|.+.... ...+. + .+.+ .=..|..++..|+..+. ....+|+|||+|+||||
T Consensus 163 v~~f~N~eLc~itedlvft~Py~~~~~~n~~~~~~~~~~~~~l~~D~~Lk~ev~~Lk~~F~--~~~~aLlHGDlHtGSI~ 240 (409)
T PRK12396 163 VKNYINPELCEITEDLVYAEPFTNHNKRNELFPLNEGWIREHIYSDKELRLEVAKLKFSFM--TNAQALIHGDLHTGSVF 240 (409)
T ss_pred hHhcCCHHHHHHhcccccccCcccchhccCCCChhhHHHHHHHhcCHHHHHHHHHHHHHHH--hcchhhccCcCCCCCEE
Confidence 011111000 01111000 00000 0 0000 11345556666666543 56789999999999999
Q ss_pred eeCCCCCEEEEeecccCcchHhHH-HHhhhhhheeeeccCCch-------hHhHHHH
Q 024452 213 IDEETSSITIIVSFTFLQNMLNFK-RACTKILLILTFSVNSPM-------VCMRWLR 261 (267)
Q Consensus 213 v~~~~~~v~lIDwE~a~~~~~~fD-~A~~~~~~~~~~~~~~~~-------~~~~~~~ 261 (267)
++++ .+.+||.|||-|||++|| .+++..+++.|+++.-.+ .+..|+-
T Consensus 241 v~~~--~~kvIDpEFAfyGP~gFDiG~~lanll~ay~~~~~~~~~~~~~~~~~~wll 295 (409)
T PRK12396 241 VKND--STKVIDPEFAFYGPMGYDIGNVMANLMFAWVNADATMSAGAEKDTYMDWLQ 295 (409)
T ss_pred ecCC--ceEEEcccccccCCcHHHHHHHHHHHHHHHhcCccccccchhhHHHHHHHH
Confidence 9963 699999999999999999 778888899999865544 5566664
No 23
>PRK11768 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=1.6e-19 Score=160.23 Aligned_cols=211 Identities=15% Similarity=0.047 Sum_probs=131.6
Q ss_pred cccCCCChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHH
Q 024452 7 ELLPSSSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEI 86 (267)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~ 86 (267)
...++-+|+.+.+.|... ++. ..-++.++ +|..|.||+|+.. ++..||+|+++++.........|.
T Consensus 6 ~~~~~l~p~~~~~a~~~~--g~~------~~~~~~~l-~s~eN~vy~v~~~-----~~~~~vlKv~r~~~~~~~~i~~E~ 71 (325)
T PRK11768 6 FPFQTLTPDLILDALESL--GLR------VDGRLLAL-NSYENRVYQFGDE-----DGRRVVAKFYRPERWSDAQILEEH 71 (325)
T ss_pred CCCCCCChHHHHHHHHHc--CCC------CccceEee-ccccceEEEEecC-----CCCEEEEEEcCcccCCHHHHHHHH
Confidence 456778899999999887 332 11245555 4568999999853 256899999975431111124799
Q ss_pred HHHHHHHhCCCC-ceEEEEEC------Ce---eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCC--CCCCc--h
Q 024452 87 RTFECMSSQGQG-PRLLGRFG------DG---RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMP--GPRKA--L 152 (267)
Q Consensus 87 ~~~~~l~~~gl~-P~v~~~~~------~~---~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~--~~~~~--~ 152 (267)
+++.+|++.|++ |.++.... +| .+++|++|+..... +++..+++|+.|++||..... ....+ +
T Consensus 72 ~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~~~~---~~~~~~~lG~~LarlH~~~~~~~~~~r~~~~ 148 (325)
T PRK11768 72 AFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRAPELD---NLDQLEWVGRFLGRIHQVGAKRPFEHRPTLD 148 (325)
T ss_pred HHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCCCCCC---CHHHHHHHHHHHHHHHhhccCCCCCCCCcCC
Confidence 999999999974 44332111 22 67999999887542 567789999999999997653 22212 1
Q ss_pred hH---HHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 153 LW---DRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 153 ~~---~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.. .....++.. +-..+.+....-...+.+....+++.+.....+.++||||+|++|||++ + .++|||||+|+
T Consensus 149 ~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~liHgD~h~~NvL~~--d-~~~iIDFDd~~ 223 (325)
T PRK11768 149 LQEYGIEPRDWLLA--SDLIPSDLRPAYLAAADQLLAAVEACWARGDVRLLRLHGDCHPGNILWR--D-GPHFVDLDDAR 223 (325)
T ss_pred HHHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCccceecCCCchhcccc--C-CcEEEeCCCCC
Confidence 11 111111110 0000000000001122222233334333234678999999999999995 2 57999999999
Q ss_pred cchHhHHHHh
Q 024452 230 QNMLNFKRAC 239 (267)
Q Consensus 230 ~~~~~fD~A~ 239 (267)
+|++.||+|.
T Consensus 224 ~g~~i~DLa~ 233 (325)
T PRK11768 224 MGPAVQDLWM 233 (325)
T ss_pred CCCHHHHHHH
Confidence 9999999876
No 24
>PLN02876 acyl-CoA dehydrogenase
Probab=99.84 E-value=5.1e-19 Score=174.45 Aligned_cols=221 Identities=12% Similarity=0.163 Sum_probs=149.8
Q ss_pred CChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHH
Q 024452 12 SSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTF 89 (267)
Q Consensus 12 ~~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~ 89 (267)
-+.+.+.+++...+|.+... .+.+.++++++|.+|.+|+++.... +...++|+|...++... ..+..+|++++
T Consensus 18 ~d~~~l~~~l~~~~~~~~~~---~~~~~v~~l~gG~sn~ty~l~~~~~--~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l 92 (822)
T PLN02876 18 FDEDALLRYAAANVAGFPVP---PSTFKVSQFGHGQSNPTFLLEVGNG--GSVKRYVLRKKPPGKLLQSAHAVEREYQVL 92 (822)
T ss_pred CCHHHHHHHHHHhCCCcCCC---ccceeEEEeCCCCcCceEEEEECCC--CcceeEEEEeCCCCccCccHHHHHHHHHHH
Confidence 45688999999888887641 2457899999999999999986421 11258999997554311 11236899999
Q ss_pred HHHHh-CCC-CceEEEEECC----e---eEEEeecCCCCCcccCC--C----hHHHHHHHHHHHhhccCCCCCC-----C
Q 024452 90 ECMSS-QGQ-GPRLLGRFGD----G---RVEEFIHARTLSAADIR--D----PKISELVAAKMREFHDLKMPGP-----R 149 (267)
Q Consensus 90 ~~l~~-~gl-~P~v~~~~~~----~---~v~e~i~G~~l~~~~l~--~----~~i~~~la~~La~lH~~~~~~~-----~ 149 (267)
+.+.+ .++ +|++++.+.+ | +||+|++|+.+....+. + ..++.++++.|++||+...+.. .
T Consensus 93 ~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g 172 (822)
T PLN02876 93 RALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYG 172 (822)
T ss_pred HHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcC
Confidence 99985 455 6999987542 2 89999999876543221 1 2367889999999999875421 0
Q ss_pred Cc-h-hHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC---CcEEEEccCCCCCCeeeeCCCCC-EEEE
Q 024452 150 KA-L-LWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH---QEIGFCHNDLQYGNIMIDEETSS-ITII 223 (267)
Q Consensus 150 ~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~---~~~~l~H~Dl~~~Nilv~~~~~~-v~lI 223 (267)
.+ . ...++..|..+........ .....+.+.+.+++|+..++... .+.++||||++++|||++++++. +.||
T Consensus 173 ~~~~~~~~~l~~w~~~~~~~~~~~--~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVL 250 (822)
T PLN02876 173 RRDNYCKRQVERWAKQYLASTGEG--KPPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGIL 250 (822)
T ss_pred CCCchHHHHHHHHHHHHHHhhccc--CCCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEE
Confidence 11 1 2235666665543221100 00112455666678876654322 25799999999999999864334 5899
Q ss_pred eecccCcchHhHHHHh
Q 024452 224 VSFTFLQNMLNFKRAC 239 (267)
Q Consensus 224 DwE~a~~~~~~fD~A~ 239 (267)
|||+|+.|++.+|+|-
T Consensus 251 DWE~a~~GdPl~DLa~ 266 (822)
T PLN02876 251 DWELSTLGNQMCDVAY 266 (822)
T ss_pred eeeccccCChHHHHHH
Confidence 9999999999999654
No 25
>PLN02756 S-methyl-5-thioribose kinase
Probab=99.82 E-value=1.3e-18 Score=156.42 Aligned_cols=238 Identities=14% Similarity=0.123 Sum_probs=152.0
Q ss_pred CChHHHHHHHHHhCCCCCCCCC-CCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-------ccccCh-
Q 024452 12 SSPEELKKVLQSVASDWGDVID-DSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-------EVFFNR- 82 (267)
Q Consensus 12 ~~~~~~~~l~~~~~p~w~~~~~-~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-------~~~~dr- 82 (267)
-+.+.+.+++.+. +.|..... ..+..+++++++|.+|.+|+|+.+ ++++|||...+.. ..-.+|
T Consensus 9 l~~~~l~~yl~~~-~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~------~~svVVKqa~p~~r~vga~wpl~~~R~ 81 (418)
T PLN02756 9 LDEKSLVEYIKAT-PALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSS------SGSFVIKQALPYIRCIGESWPMTKERA 81 (418)
T ss_pred CCHHHHHHHHHHc-cchhhhcCCCCCCceEEEcCCCceeeEEEEEcC------CccEEEEeCCccccCCCccccCCccHH
Confidence 3568888888887 43332211 125678999999999999999742 3689999876332 123455
Q ss_pred HHHHHHHHHHHhC--CCCceEEEEECCe--eEEEeecC-C-CCCcc---cCCChHHHHHHHHHHHhh--ccCCCCCCCCc
Q 024452 83 DDEIRTFECMSSQ--GQGPRLLGRFGDG--RVEEFIHA-R-TLSAA---DIRDPKISELVAAKMREF--HDLKMPGPRKA 151 (267)
Q Consensus 83 ~~E~~~~~~l~~~--gl~P~v~~~~~~~--~v~e~i~G-~-~l~~~---~l~~~~i~~~la~~La~l--H~~~~~~~~~~ 151 (267)
..|.++++.+++. +.+|++|+++++. ++|||++| . .+... ....|...+++|..|++. |....--.. .
T Consensus 82 ~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd~~~~~-~ 160 (418)
T PLN02756 82 YFEATALREHGRLCPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSLLYHDT-T 160 (418)
T ss_pred HHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcchhccCh-h
Confidence 4677777777665 4689999999754 88999988 3 34332 223478899999999986 322210000 0
Q ss_pred hhHHHHHHHH-------------------HHHhhccCcccc----cc-cchhhHHHHHHHHHHhCCCCCCcEEEEccCCC
Q 024452 152 LLWDRLRKWV-------------------SVAKSFCSAKDA----KE-FCLYTLKDEISMLEKELPNDHQEIGFCHNDLQ 207 (267)
Q Consensus 152 ~~~~~l~~~~-------------------~~~~~~~~~~~~----~~-~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~ 207 (267)
.-......|. +.-.....+... +. ..=..+..++..|+..+. ....+|+|||+|
T Consensus 161 ~kk~~~~~f~~N~elc~itEdlvFt~Py~~~~~n~~~~p~l~~~~~~l~~d~~L~~~v~~Lk~~f~--~~~~~L~HGDl~ 238 (418)
T PLN02756 161 EHKRAVAEFCGNVELCRLTEQVVFSDPYKVSQYNRWTSPYLDRDAEAVREDNILKLEIAELKSMFC--ERAQALVHGDLH 238 (418)
T ss_pred hhhHHHHHhcCCHHHHHHHHhheeccccccchhcCCCCcchHHHHHHHhcCHHHHHHHHHHHHHHH--hcccceeecCCC
Confidence 0001111111 000000000000 00 011456666777776653 567899999999
Q ss_pred CCCeeeeCCCCCEEEEeecccCcchHhHH-HHhhhhhheeeeccCCch-------hHhHHHH
Q 024452 208 YGNIMIDEETSSITIIVSFTFLQNMLNFK-RACTKILLILTFSVNSPM-------VCMRWLR 261 (267)
Q Consensus 208 ~~Nilv~~~~~~v~lIDwE~a~~~~~~fD-~A~~~~~~~~~~~~~~~~-------~~~~~~~ 261 (267)
+||||++++ .+.+||.|||-+|+++|| ..++..+++.|+++.-.+ .+..|+-
T Consensus 239 ~g~i~~~~~--~~~~id~ef~~~g~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 298 (418)
T PLN02756 239 TGSVMVTPD--STQVIDPEFAFYGPMGFDIGAFLGNLILAYFAQDGHADQANDRKTYKEWIL 298 (418)
T ss_pred CCcEEEcCC--CceEecchhhccCchHHhHHHHHhhhHHHHhhCcccccccchhHHHHHHHH
Confidence 999999963 589999999999999999 556777788998865444 4566664
No 26
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=99.81 E-value=1.2e-18 Score=153.68 Aligned_cols=213 Identities=14% Similarity=0.078 Sum_probs=134.1
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCC-ceEE-EEE-------CC-
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQG-PRLL-GRF-------GD- 107 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~-P~v~-~~~-------~~- 107 (267)
-++..+.+ ..|.||+|++. .+++|+|++.++ ....+...|.+++.+|++.|++ |.++ ..+ .+
T Consensus 29 ~~~~~l~s-~eN~~f~~~~~------~g~~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~ 100 (331)
T COG2334 29 GSLRGLNS-EENSNFRVQTE------DGRYILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGG 100 (331)
T ss_pred cccccccc-ccCceEEEEec------CCCeEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCC
Confidence 35666655 79999999863 367799999887 2222335899999999999974 4432 211 12
Q ss_pred -e--eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCC-CchhHHHHHHHH----HHHhhccCcccccccchh
Q 024452 108 -G--RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPR-KALLWDRLRKWV----SVAKSFCSAKDAKEFCLY 179 (267)
Q Consensus 108 -~--~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~-~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~ 179 (267)
. .+++|++|+.+.. -.+.+.++.+|+.|++||........ .|+... ...|. .......... ..-...
T Consensus 101 ~r~a~lf~~l~G~~~~~--~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~-~~~w~~~~~~~~~~~~~~~--~~~l~a 175 (331)
T COG2334 101 PRPAALFEYLPGRPLER--DDNAEQLEELGRMLGRLHLALRGFPFERPNALR-RLEWDILEPRALLRLDLVE--PEDLRA 175 (331)
T ss_pred ceeEEEEEecCCcCcCC--CCcHHHHHHHHHHHHHHHHHhCcCCccCCCccc-ccchhhhcchhhhhhcccC--chhhHH
Confidence 1 7899999999885 23457899999999999998765431 122111 11121 1000000000 000123
Q ss_pred hHHHHHHHHHHhCCCC--CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhhhheeeeccCCchhHh
Q 024452 180 TLKDEISMLEKELPND--HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKILLILTFSVNSPMVCM 257 (267)
Q Consensus 180 ~l~~~~~~l~~~l~~~--~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~~~~~~~~~~~~~~~~ 257 (267)
.+...++.+.+.+... .....+||||++++||++++++..+++|||++|++|+..||+|.+=... ..-.....+...
T Consensus 176 ~~~~~~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~~~~i~DlAi~l~~~-~~d~~~~~~~~~ 254 (331)
T COG2334 176 ALLAALDRLLARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGYGWFIYDLAIALNAW-NGDEADPRAAIA 254 (331)
T ss_pred HHHHHHHHHHhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccccchHHHHHHHHHHHh-hcCCCCcHHHHH
Confidence 4445555565555331 2223499999999999999742248999999999999999976533221 222344455566
Q ss_pred HHHHHHh
Q 024452 258 RWLRILC 264 (267)
Q Consensus 258 ~~~~~~~ 264 (267)
.|+.+|+
T Consensus 255 a~l~GY~ 261 (331)
T COG2334 255 AFLEGYE 261 (331)
T ss_pred HHHHHHH
Confidence 7788876
No 27
>PRK10593 hypothetical protein; Provisional
Probab=99.81 E-value=2.3e-18 Score=150.94 Aligned_cols=207 Identities=8% Similarity=0.091 Sum_probs=129.3
Q ss_pred HHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCC-cccccChHHHHHHHHHHHh
Q 024452 16 ELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEG-VEVFFNRDDEIRTFECMSS 94 (267)
Q Consensus 16 ~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~-~~~~~dr~~E~~~~~~l~~ 94 (267)
.|.+-+.+.++. ...++++|.+|.++.+|+++.. ++++|+|++... ...++ ..|++.++.|++
T Consensus 3 ~~~~~~~~~~~~--------~~~~~~~i~~G~~~~vy~~~~~------~~~~~~k~~~~~~~~~~~--~~Ea~~L~~L~~ 66 (297)
T PRK10593 3 QLRAELSHLLGE--------KLSRVECISEQPYAALWALYDS------QGNPMPLMARSFSTPGVA--QQEAWKLSMLAR 66 (297)
T ss_pred HHHHHHHHHhch--------hhheeeecCCccceeEEEEEcC------CCCEEEEEecccccchHH--HHHHHHHHHHcc
Confidence 344555555443 2358899999999999999742 357888986543 22233 489999999999
Q ss_pred CC-C-CceEEEEEC-------CeeEEEeecCCCCCcccCCC---hHHHHHHHHHHHhhccCCCCC---CCCchhHHHHHH
Q 024452 95 QG-Q-GPRLLGRFG-------DGRVEEFIHARTLSAADIRD---PKISELVAAKMREFHDLKMPG---PRKALLWDRLRK 159 (267)
Q Consensus 95 ~g-l-~P~v~~~~~-------~~~v~e~i~G~~l~~~~l~~---~~i~~~la~~La~lH~~~~~~---~~~~~~~~~l~~ 159 (267)
.+ + +|+|++... ..+|+|||+|.++....... .....++++.|++||+.+..+ .........+..
T Consensus 67 ~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~~g~~g~~~~~~~~~w~~ 146 (297)
T PRK10593 67 SGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVEAPARTPERWEQLKDQIVEGLLAWHRIDSRGCVGAVDSTQENLWPS 146 (297)
T ss_pred CCCCCcCcEEEEeccCCcCCCeEEEEeccCCEecCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcccCCCCcccccHHH
Confidence 75 4 799998642 23999999998876421111 234567789999999975321 111011123444
Q ss_pred HHHHHhh-----ccCcccccccchhhHHHHHHHHH----HhCCCCCCcEEEEccCCCCCCeeeeCCCCC-EEEEeecccC
Q 024452 160 WVSVAKS-----FCSAKDAKEFCLYTLKDEISMLE----KELPNDHQEIGFCHNDLQYGNIMIDEETSS-ITIIVSFTFL 229 (267)
Q Consensus 160 ~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~l~----~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~-v~lIDwE~a~ 229 (267)
|+.+-.. +.... ..... ......+.++. +.+.....++++||||+|+||||++++++. +.+||+..|.
T Consensus 147 f~~~rl~~~~~~~~~~~-~~~l~-~~~~~~~~~l~~~l~~~L~~~~~~psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~ 224 (297)
T PRK10593 147 WYQQRVEVLWTTLNQFN-NTGLT-MQDRRILFRTRECLPALFEGFNDNCVLVHGNFTLRSMLKDPRSDQLLAMLNPGLML 224 (297)
T ss_pred HHHHHHHHHHhhhhhcc-ccCCC-hhHHHHHHHHHHhchhhhccCCCCCeeEeCCCCcccEEECCCCCceEEEECchHhC
Confidence 4432110 00000 00010 11122233333 333333446899999999999999864233 7899999999
Q ss_pred cchHhHHHHhh
Q 024452 230 QNMLNFKRACT 240 (267)
Q Consensus 230 ~~~~~fD~A~~ 240 (267)
+|++++|+|.+
T Consensus 225 ~g~rE~DLa~~ 235 (297)
T PRK10593 225 WAPREYELFRL 235 (297)
T ss_pred CCCHHHhHHHh
Confidence 99999999764
No 28
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=99.79 E-value=5.3e-18 Score=147.14 Aligned_cols=193 Identities=11% Similarity=-0.044 Sum_probs=120.8
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhC-CC-CceEEEEECCeeEEEeec
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQ-GQ-GPRLLGRFGDGRVEEFIH 115 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~-gl-~P~v~~~~~~~~v~e~i~ 115 (267)
-++....+|++|.+|.+... ++..+|+|+...... ....++|.++++.|+.+ .+ .|+++..+.+..++++++
T Consensus 14 ~~~~~~~~g~~~~v~~i~~~-----~g~~~VlR~p~~~~~-~~~l~rE~~vL~~L~~~l~vpvP~~~~~~~~~~~y~~i~ 87 (276)
T cd05152 14 ETLSLNESGLDFQVVFAKDT-----DGVPWVLRIPRRPDV-SERAAAEKRVLALVRKHLPVQVPDWRVHTPELIAYPKLP 87 (276)
T ss_pred CcceecCCcceeEEEEEEcC-----CCCeEEEEecCCHHH-HHHHHHHHHHHHHHHhcCCCCCCceeeecCceEEEeccC
Confidence 35666688899999998521 357999999854321 11236899999999885 33 477766666668899999
Q ss_pred CCCCCccc-------------CCChHHHHHHHHHHHhhccCCCCCC-----CCchhHHHHHHHHHHHhhccCcccccccc
Q 024452 116 ARTLSAAD-------------IRDPKISELVAAKMREFHDLKMPGP-----RKALLWDRLRKWVSVAKSFCSAKDAKEFC 177 (267)
Q Consensus 116 G~~l~~~~-------------l~~~~i~~~la~~La~lH~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 177 (267)
|.++...+ -..+.++.++|+.|++||+++.+.. ...........|...+.+...... ..
T Consensus 88 G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~---~~ 164 (276)
T cd05152 88 GVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDEAEAAGIPVETPEEVRQTMADRMDRVKEEFG---VS 164 (276)
T ss_pred CCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhhccccCCCCCCHHHHHHHHHHHHHHHHHhcC---CC
Confidence 98763211 1124578899999999999875321 111111112223232222111000 00
Q ss_pred hhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhh
Q 024452 178 LYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACT 240 (267)
Q Consensus 178 ~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~ 240 (267)
...+....++|.+. .....+.++||||++++|||++++++..+||||++|++|++++|+|.+
T Consensus 165 ~~l~~~~~~~L~~~-~~~~~~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa~Dla~~ 226 (276)
T cd05152 165 EALWNRWQAWLDDD-SYWPRHTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPARDFVLH 226 (276)
T ss_pred HHHHHHHHHHHhhc-CCCCCCCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHHHHHHHH
Confidence 01222222333321 123556899999999999999863233579999999999999998863
No 29
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=99.77 E-value=6.5e-18 Score=149.51 Aligned_cols=212 Identities=13% Similarity=0.065 Sum_probs=131.3
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCC-------CcccccCh-HHHHHHHHHHHhC--CCCceEEEEECCe--e
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGE-------GVEVFFNR-DDEIRTFECMSSQ--GQGPRLLGRFGDG--R 109 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~-------~~~~~~dr-~~E~~~~~~l~~~--gl~P~v~~~~~~~--~ 109 (267)
.+++|..|.||+|..+. .+++++||...+ ++..-.+| ..|..+++.+++. +.+|++|+++++. .
T Consensus 2 EigdGnlN~VfrV~~~~----g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~ 77 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQE----GDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVT 77 (370)
T ss_pred cCCCCceEEEEEEEcCC----CCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcccccee
Confidence 46899999999998531 125899886532 23444566 5788999888776 3589999998754 8
Q ss_pred EEEeecCCCCCcc----cCCChHHHHHHHHHHHhhccCCCCCCCC-------------chhHHHHH------HHHHHHhh
Q 024452 110 VEEFIHARTLSAA----DIRDPKISELVAAKMREFHDLKMPGPRK-------------ALLWDRLR------KWVSVAKS 166 (267)
Q Consensus 110 v~e~i~G~~l~~~----~l~~~~i~~~la~~La~lH~~~~~~~~~-------------~~~~~~l~------~~~~~~~~ 166 (267)
+||+++....-+. .-..|..+.++|+.|++.|-.+....-. +.+.+-.+ -|.+....
T Consensus 78 vMEdL~~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd~~~~~~~kk~l~~~f~N~eLc~itEdlvft~py~~~~~n 157 (370)
T TIGR01767 78 VMEDLSHHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSDYALEPKVKKALVAQFTNPELCDITERLVFTDPYFDHDTN 157 (370)
T ss_pred hHhhCccchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCHHHHHHHHHHhCCHHHHHHHHHhccccchhhhhhh
Confidence 8999976433221 1234778999999999987544211100 01000000 01110000
Q ss_pred ccCcc-c--ccc-cchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHH-hhh
Q 024452 167 FCSAK-D--AKE-FCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRA-CTK 241 (267)
Q Consensus 167 ~~~~~-~--~~~-~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A-~~~ 241 (267)
...+. + .+. ..-..++.++..|+..+. ....+++|||+|+||||++++ .+.+||||+|.+|+++||+| ++.
T Consensus 158 ~~~p~l~~~~~~l~~d~~l~~~v~~Lk~~f~--~~~~~llHGDl~~gNi~~~~~--~~~~iD~e~~~~G~~~~Dlg~~ia 233 (370)
T TIGR01767 158 DFEEELRPFVAKLRNDDSLKIEAAKLKHSFL--ASAETLLHGDLHSGSIFVSEH--ETKVIDPEFAFYGPIGFDIGQFIA 233 (370)
T ss_pred cCChhHHHHHHHHhcCHHHHHHHHHHHHhhc--cCcceeeeccCCcccEEEcCC--CCEEEcCcccccCchHhhHHHHHH
Confidence 00000 0 000 011344555555655442 566799999999999999853 58899999999999999944 556
Q ss_pred hhheeeeccCCc------hhHhHHHH
Q 024452 242 ILLILTFSVNSP------MVCMRWLR 261 (267)
Q Consensus 242 ~~~~~~~~~~~~------~~~~~~~~ 261 (267)
.+++.++++.-. -.+..|+-
T Consensus 234 nL~l~~~~~~~~~~~~~~~~~~~~ll 259 (370)
T TIGR01767 234 NLFLNALSRDGADQKGKRDAMREPLL 259 (370)
T ss_pred HHHHHHhCccccCccchhHHHHHHHH
Confidence 667777765433 35667764
No 30
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=99.76 E-value=3.4e-17 Score=144.23 Aligned_cols=201 Identities=15% Similarity=0.113 Sum_probs=117.3
Q ss_pred eeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCC-CceEEEEEC--------C--eeEEEeecCC
Q 024452 49 NEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQ-GPRLLGRFG--------D--GRVEEFIHAR 117 (267)
Q Consensus 49 N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl-~P~v~~~~~--------~--~~v~e~i~G~ 117 (267)
+.+|+|+++ ++.+++|.+...... ...|.+++.+|++.|+ +|+++.... + ..+++|++|+
T Consensus 10 ~~v~~v~t~------~g~~~LK~~~~~~~~---~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~ 80 (313)
T TIGR02906 10 RNVYKVETD------SGNKCLKKINYPPER---LLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWIEGR 80 (313)
T ss_pred ccEEEEEeC------CCCeEEEEcCCCHHH---HHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhccCc
Confidence 459999853 357999987533221 2368899999999997 477765422 1 2789999998
Q ss_pred CCCcccCCChHHHHHHHHHHHhhccCCCCCCCC----c----h-hHHHHHHHHHHHhhc-------cCcccccccc---h
Q 024452 118 TLSAADIRDPKISELVAAKMREFHDLKMPGPRK----A----L-LWDRLRKWVSVAKSF-------CSAKDAKEFC---L 178 (267)
Q Consensus 118 ~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~----~----~-~~~~l~~~~~~~~~~-------~~~~~~~~~~---~ 178 (267)
++.. .++..+.++|+.||+||......... + . ..+.+....+.+.+. ....+..... +
T Consensus 81 ~~~~---~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 157 (313)
T TIGR02906 81 ECDF---NNPIDLKKAAKGLALFHHASKGYVPPDGSKIRSKLGKWPKQFEKRLKELERFKKIALEKKYKDEFDKLYLKEV 157 (313)
T ss_pred CCCC---CCHHHHHHHHHHHHHHHHhCCCCCCCCcchhhccccchHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 8763 34667899999999999987543210 0 0 111111111111110 0000000000 0
Q ss_pred ----hhHHHHHHHHHH-----hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhhhhe-eee
Q 024452 179 ----YTLKDEISMLEK-----ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKILLI-LTF 248 (267)
Q Consensus 179 ----~~l~~~~~~l~~-----~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~~~~-~~~ 248 (267)
......++.+.. .......+.++||||++++||++++ +.+.|||||+|+++++.+|+|.+-..++ ...
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~liHgD~~~~Nil~~~--~~i~lIDfd~~~~~~~~~Dla~~l~~~~~~~~ 235 (313)
T TIGR02906 158 DYFLERGKKALELLNKSKYYDLCKEAKKIRGFCHQDYAYHNILLKD--NEVYVIDFDYCTIDLPVRDLRKLIIKLMKKNG 235 (313)
T ss_pred HHHHHHHHHHHHHHhhCcHHHHHHhhcCcCceEcCCCCcccEEEeC--CcEEEEECcccccCCcHHHHHHHHHHHHHhcc
Confidence 111111122211 1112345789999999999999985 4689999999999999999885333333 111
Q ss_pred ccCCchhHhHHHHHHh
Q 024452 249 SVNSPMVCMRWLRILC 264 (267)
Q Consensus 249 ~~~~~~~~~~~~~~~~ 264 (267)
. .+......++.+|+
T Consensus 236 ~-~d~~~~~~~l~gY~ 250 (313)
T TIGR02906 236 V-WDLEKAKEIIEAYS 250 (313)
T ss_pred C-CCHHHHHHHHHHhh
Confidence 1 12223456666665
No 31
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=99.75 E-value=8e-18 Score=145.10 Aligned_cols=198 Identities=18% Similarity=0.158 Sum_probs=118.4
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC----CeeEEEee
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG----DGRVEEFI 114 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~----~~~v~e~i 114 (267)
.+.++. |.||.+|++... ....++.|.+++....+..+. +. |+++.... +.++.++.
T Consensus 10 ~~~~~~-g~t~~~~~~~~~-----g~~~~~~r~~~p~~~~~~~~~------------~~-~~l~~~~~~~~~~~~~~q~~ 70 (269)
T COG0510 10 KITPLN-GLTGYAFRIEGE-----GTRVFLKRNFEPFLPALIFRL------------IV-PKLLWLKRIANGGVLVAQYW 70 (269)
T ss_pred eeeecc-CCcceeEEeeCC-----CCeeeeecCCCcchHHHHHHh------------hh-hhhhhhcccccCCceEEeee
Confidence 566665 889999999522 124444556555443333221 22 33333322 22555555
Q ss_pred -cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCC---CCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 115 -HARTLSAADIRDPKISELVAAKMREFHDLKMPGP---RKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 115 -~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
.|++++... .....++..|+++|....... .....+..+..+.+.+...... .......+...+..++.
T Consensus 71 ~~~~~l~~~~----~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~ 143 (269)
T COG0510 71 ENGRTLTPED----MNLKKIAHILKKLHNSVPLLHQLPRSGSSFIEPKDYLELLWQQNSR---AYRDNHLLRKKLKELRR 143 (269)
T ss_pred ccccccCccc----cchHHHHHHHHHhcCccchHHHHHhhcchHhhHHHHHHHHHhhchH---HhhhhHHHHHHHHHHHH
Confidence 567777652 235678889999999543221 1112334455555544322210 01134667777888887
Q ss_pred hCCCCCCc-EEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhh-hheeeeccCCchhHhHHHHHHhh
Q 024452 191 ELPNDHQE-IGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKI-LLILTFSVNSPMVCMRWLRILCL 265 (267)
Q Consensus 191 ~l~~~~~~-~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 265 (267)
.+.....+ .++||||++++|++.++ .+++.|||||||+.|+++||+|++=+ .+++.. +.-..+..|+..+-.
T Consensus 144 ~l~~~~~~~~v~cH~Dl~~~N~l~t~-~~~l~LIDWEyAg~~D~~~DLA~~~~e~~~~~~--~~~~~~~~~~~~~~~ 217 (269)
T COG0510 144 ALEEVPKDDLVPCHNDLNPGNLLLTD-KGGLFLIDWEYAGLNDPAFDLAALLSEYIFNHN--ELEDLYSAYLEKYGF 217 (269)
T ss_pred HhhhcCCCceeeecCCCCccceEEcC-CCcEEEEecccCCCccHHHHHHHHHHHhccchh--HHHHHHHHHHHhCCc
Confidence 77766666 99999999999999986 36899999999999999999887222 122221 011256667666543
No 32
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=99.73 E-value=2.3e-17 Score=143.40 Aligned_cols=203 Identities=16% Similarity=0.203 Sum_probs=113.6
Q ss_pred HHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhC
Q 024452 16 ELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQ 95 (267)
Q Consensus 16 ~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~ 95 (267)
.|.+.|.+.++.= ....++++++||..|..|+++. ++++||+|+.......++ +.|++.++.|++.
T Consensus 4 ~i~~~~~~~~~~~------~~i~~~~~v~GG~i~~a~~~~~------~~~~~FvK~~~~~~~~~f--~~Ea~gL~~L~~~ 69 (288)
T PF03881_consen 4 AIEQQISEQLGAD------FKITSIEPVSGGDINEAYRLDT------DGGSYFVKVNSESGRDMF--EGEAEGLKALAEA 69 (288)
T ss_dssp HHHHHHHHHHTS-----------EEEEE--SSSSEEEEEET------TS-EEEEEEEEGGGCCHH--HHHHHHHHHHCHT
T ss_pred HHHHHHHHHhCCC------CceeeeEecCCCChhheEEEEC------CCccEEEEecChhhHHHH--HHHHHHHHHHHhc
Confidence 4566666665431 1356899999999999999983 358999999764333344 4899999999764
Q ss_pred C--CCceEEEEEC--C--eeEEEeecCCCCCcccCCChHHHHHHHHHHHhhcc-CCCCC---C--------CCchhH-HH
Q 024452 96 G--QGPRLLGRFG--D--GRVEEFIHARTLSAADIRDPKISELVAAKMREFHD-LKMPG---P--------RKALLW-DR 156 (267)
Q Consensus 96 g--l~P~v~~~~~--~--~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~-~~~~~---~--------~~~~~~-~~ 156 (267)
+ .+|+|+.... + .+|+||++....+. .-..++|+.||+||+ .+.+. . ++++-| +.
T Consensus 70 ~~~~vP~vi~~G~~~~~~fLlle~l~~~~~~~------~~~~~lg~~LA~LH~~~~~~~FGf~~~~~~G~~~q~N~w~~~ 143 (288)
T PF03881_consen 70 NPIRVPKVIAWGEYDDDAFLLLEFLEMGSPSP------PDWEELGRQLAALHQWSPAGKFGFPVDTYIGSLPQPNTWTDS 143 (288)
T ss_dssp TTSBS--EEEEEE-SSCCEEEEE--------C------CHHHHHHHHHHHHHH-T--SSBB-SS-EEETTEEE----BS-
T ss_pred CCCCCCeEEEEEeecCCceEEEEeecCCCCCc------hhHHHHHHHHHHHhhhcCCCCcCCCcCCcccCcCCCCCCCCC
Confidence 3 4799999863 2 29999998763322 236899999999999 33221 0 111211 34
Q ss_pred HHHHHHHHhhccCcc---cccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchH
Q 024452 157 LRKWVSVAKSFCSAK---DAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNML 233 (267)
Q Consensus 157 l~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~ 233 (267)
|..|+... ++.... ..+......+++.++.+.+.+.....+++++||||+.||++++.+ +...|||-- |.+|++
T Consensus 144 W~~Ff~~~-RL~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~-g~p~l~DPa-~yygh~ 220 (288)
T PF03881_consen 144 WEEFFAEQ-RLRPQLELAREKGGLDAELERLVERLPSLLPGREPKPSLLHGDLWSGNVGFDAD-GEPVLFDPA-CYYGHR 220 (288)
T ss_dssp HHHHHHHH-CCHHHHHHHHHCTSS-CHHHHHHHHHHHCCTTS----EEE-SS-SGGGEEEETT-E-EEE-S----EEE-C
T ss_pred HHHHHHHH-HHHHHHHHHHhhCCchhHHHHHHHHHHHHhcCCCCCceeeEcCccccceeecCC-CCceeeccc-cccCch
Confidence 44444321 111000 001111345566667777777555667899999999999999975 679999998 889999
Q ss_pred hHHHHhhh
Q 024452 234 NFKRACTK 241 (267)
Q Consensus 234 ~fD~A~~~ 241 (267)
++|+|++.
T Consensus 221 E~DLam~~ 228 (288)
T PF03881_consen 221 EVDLAMTR 228 (288)
T ss_dssp HHHHHHHC
T ss_pred Hhhhhhhh
Confidence 99999865
No 33
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=99.72 E-value=1e-16 Score=141.47 Aligned_cols=205 Identities=11% Similarity=0.084 Sum_probs=121.2
Q ss_pred CceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCC-ceEEEEECC--------e---eEEE
Q 024452 45 GAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQG-PRLLGRFGD--------G---RVEE 112 (267)
Q Consensus 45 ~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~-P~v~~~~~~--------~---~v~e 112 (267)
.|..|.||+|.++ ++.+++|........+ .....++++|.+.|+. |.++....+ + .+++
T Consensus 16 ~~~~~~v~~v~T~------~G~~~Lk~~~~~~~~l---~~~~~~~~~L~~~G~~~~~~~~~t~~G~~~~~~~~~~~~L~~ 86 (309)
T TIGR02904 16 EQVTGKLFKVYTD------QGVFALKKLYADRNTI---ESFVSQIQVLSEKGFSRIVPVYPTKDGSYYLFHGHFLYYLMP 86 (309)
T ss_pred ecccCcEEEEEeC------CCCEEEEEeccchHhH---HHHHHHHHHHHHcCCCcCCceeecCCCCeeeEECCEEEEEeC
Confidence 3447899999863 4689999876332111 2677888999999973 444433221 1 6899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCc-----hhHHH-HHHHHHH---HhhccCccc----cccc---
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKA-----LLWDR-LRKWVSV---AKSFCSAKD----AKEF--- 176 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~-----~~~~~-l~~~~~~---~~~~~~~~~----~~~~--- 176 (267)
|++|+. ...+...+.++|+.||+||.......... ..++. ...|... +.......+ ..++
T Consensus 87 wi~G~~----~~~~~~~~~~~~~~LA~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~fe~~ 162 (309)
T TIGR02904 87 WLDIER----NEERNYQHESMFQELALLHRKTVKTERVTEEELKKHYERTLSRWENIPEGLEEFIVEAEAKWYMSPFELQ 162 (309)
T ss_pred Cccccc----ccCCHHHHHHHHHHHHHHHHhhhCCCcccHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 999943 22334568999999999999987421110 11111 1222211 111000000 0000
Q ss_pred -------chhhHHHHHHHHHHhC----CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhhhhe
Q 024452 177 -------CLYTLKDEISMLEKEL----PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKILLI 245 (267)
Q Consensus 177 -------~~~~l~~~~~~l~~~l----~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~~~~ 245 (267)
..+.+...++.+.++. .....+.++||||++++|+|++++ +.+.+||||+|+++++.+|+|..-.-++
T Consensus 163 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~lcHgD~~~~Nvl~~~~-~~~~iIDfd~~~~d~~~~DLa~~~~~~~ 241 (309)
T TIGR02904 163 ACTYYHEVMQAAEFAQNKLEDWHEATKEKESWRTVLVHGKLSLSHFLYDET-RGGYFINFEKASFASPLTDLAAFFRRSF 241 (309)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcceeeeCCCCcHHhEEEcCC-CCEEEEEhhhcccCCcHHHHHHHHHHHH
Confidence 0123333333333321 123567899999999999999864 5789999999999999999874433344
Q ss_pred eeeccCCchhHhHHHHHHh
Q 024452 246 LTFSVNSPMVCMRWLRILC 264 (267)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~ 264 (267)
.....+ ......+++.|.
T Consensus 242 ~~~~~~-~~~~~~~l~~Y~ 259 (309)
T TIGR02904 242 GTYPQP-IDEMFEWFYTYE 259 (309)
T ss_pred hhCCCC-hHHHHHHHHHHH
Confidence 332222 233566777664
No 34
>PRK06148 hypothetical protein; Provisional
Probab=99.72 E-value=2e-16 Score=158.43 Aligned_cols=235 Identities=12% Similarity=0.105 Sum_probs=148.5
Q ss_pred ccccCCCChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHH
Q 024452 6 TELLPSSSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDE 85 (267)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E 85 (267)
+.--|..+.+++.+++.++++- . -++++| +|..|.||+|+.. ++..||+|++++... ....+.|
T Consensus 5 ~~~~p~~s~~~~~~~~~~~ygl-~--------~~~~~L-~s~~d~nf~v~~~-----~g~~yVLKi~~~~~~-~~~~~~q 68 (1013)
T PRK06148 5 SHPAPEFTTKDAEALLAQHFGI-S--------ATATPL-DGERDLNFRLTTD-----DGADYILKIVNPSEP-RVESDFQ 68 (1013)
T ss_pred CCCCCCCCHHHHHHHHHHHcCC-c--------eEEeec-CCcCCceEEEEeC-----CCCeEEEEEcCCccc-hhHHHHH
Confidence 4456888999999999999763 2 256787 4567999999854 246899999976532 1122467
Q ss_pred HHHHHHHHhC--CC-CceEEEEE----------CCe-----eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCC
Q 024452 86 IRTFECMSSQ--GQ-GPRLLGRF----------GDG-----RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPG 147 (267)
Q Consensus 86 ~~~~~~l~~~--gl-~P~v~~~~----------~~~-----~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~ 147 (267)
.+++.+|++. |+ +|+++... .+| ++++|++|+++....-.++..++++|+.+++||.....+
T Consensus 69 ~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F 148 (1013)
T PRK06148 69 TAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGF 148 (1013)
T ss_pred HHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 8899999987 76 58776431 122 579999999886522235678999999999999986433
Q ss_pred CC----CchhHHH-HHHHHHHH-hhccCcccccccchhhHHHHHHHHHHhCC-C-CCCcEEEEccCCCCCCeeeeCCC--
Q 024452 148 PR----KALLWDR-LRKWVSVA-KSFCSAKDAKEFCLYTLKDEISMLEKELP-N-DHQEIGFCHNDLQYGNIMIDEET-- 217 (267)
Q Consensus 148 ~~----~~~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~l~~~l~-~-~~~~~~l~H~Dl~~~Nilv~~~~-- 217 (267)
.. ....|.. -..|.... .....+ -....+.+.++.+.+.+. . ...|..+||||+++.||++++++
T Consensus 149 ~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~-----~~r~~l~~~~~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~ 223 (1013)
T PRK06148 149 MHPGALRDLDWDLRHAGRARDRLHFIDDP-----EDRALVERFLARFERNVAPRLAALPAQVIHNDANDYNILVDADDGE 223 (1013)
T ss_pred CCCCcccccccccccchhhhhhhhhcCCH-----HHHHHHHHHHHHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCc
Confidence 21 1111110 00111111 111110 011233444444443211 1 35678899999999999999743
Q ss_pred CCEEEEeecccCcchHhHHHHhhh-hhheeeeccCCc-hhHhHHHHHHh
Q 024452 218 SSITIIVSFTFLQNMLNFKRACTK-ILLILTFSVNSP-MVCMRWLRILC 264 (267)
Q Consensus 218 ~~v~lIDwE~a~~~~~~fD~A~~~-~~~~~~~~~~~~-~~~~~~~~~~~ 264 (267)
...+||||++|.++++.||+|.+- |.++. ...+ ...-.++++|+
T Consensus 224 ~isGiIDFgDa~~~~~v~DLAialay~~~~---~~~p~~~~~a~laGY~ 269 (1013)
T PRK06148 224 RISGLIDFGDAVHAPRICEVAIAAAYAILD---HPDPIGAAAALVAGYH 269 (1013)
T ss_pred ceEEEEECcccccccHHHHHHHHHHHHhcC---CCChHHHHHHHHHHHh
Confidence 235799999999999999976544 44432 1122 13345666665
No 35
>PRK10271 thiK thiamine kinase; Provisional
Probab=99.71 E-value=7.8e-17 Score=130.60 Aligned_cols=115 Identities=13% Similarity=0.081 Sum_probs=88.7
Q ss_pred eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHH
Q 024452 109 RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISML 188 (267)
Q Consensus 109 ~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 188 (267)
++.+|++|++++.. ....+++..+++||+.+..+. ..++++.+++|..++..... ....+ ..+..+
T Consensus 1 llv~Wl~Ge~~~~~-----~~~~~La~~l~~LH~~p~~~~-~~~l~~~i~~Yw~~l~~~~~-------~~~wl-~~~~~~ 66 (188)
T PRK10271 1 MAVDYLPGEVKSYL-----PDTNELAGLLYHLHQQPRFGW-RITLLPLLEQYWQQSDPARR-------TPFWL-RMLKRL 66 (188)
T ss_pred CcccccCCCcCCCc-----cCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHhccccC-------CHHHH-HHHHHH
Confidence 35799999998754 236789999999999887433 35899999999887643211 11233 356666
Q ss_pred HHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 189 EKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 189 ~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
+......+.+.++||||++|+|+++.++ ++.+||||||+.|++.+|+|+
T Consensus 67 ~~~~~~~~l~~~p~H~D~~~~N~~~~~~--~~~lIDwe~a~~gDp~~DLa~ 115 (188)
T PRK10271 67 RKAGEPRPLRLAPLHMDVHAGNLVHSAS--GLRLIDWEYAGDGDIALELAA 115 (188)
T ss_pred HhcccCCCCCeeeecCCCCCccEEEECC--CEEEEeCCcccCCCHHHHHHH
Confidence 6666567788999999999999999863 489999999999999999887
No 36
>PRK06149 hypothetical protein; Provisional
Probab=99.70 E-value=4.1e-16 Score=155.99 Aligned_cols=235 Identities=11% Similarity=0.110 Sum_probs=146.1
Q ss_pred ccCCCChHHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHH
Q 024452 8 LLPSSSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIR 87 (267)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~ 87 (267)
--|..+.+++.+++.++++- . -++.++ +|..|.||+|++. +++||+|++++.-.. .....|.+
T Consensus 13 ~~p~ls~~~~~~ll~~~ygl-~--------~~~~~L-~s~~d~nf~v~t~------~~~yVLKi~~~~~~~-~~l~~e~~ 75 (972)
T PRK06149 13 PAPDVSEAQAERILAEHYGL-S--------GTLTEL-GSQQDRNFRVDSD------GGRFVLKICHAAYAA-VELEAQHA 75 (972)
T ss_pred CCCCCCHHHHHHHHHHhcCC-c--------eEEEec-CCcCcceEEEEec------CCcEEEEeCCccCCh-HHHHHHHH
Confidence 34667889999999877652 1 256777 4667999999853 368999998754221 22357888
Q ss_pred HHHHHHhC--CC-CceEEEEEC-----------Ce---eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCC
Q 024452 88 TFECMSSQ--GQ-GPRLLGRFG-----------DG---RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRK 150 (267)
Q Consensus 88 ~~~~l~~~--gl-~P~v~~~~~-----------~~---~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~ 150 (267)
++.+|++. |+ +|+++-... .+ ++++|++|.++....-.++..++++|+.+++||.....+...
T Consensus 76 ~l~hL~~~~~glpvp~pi~t~~G~~~~~~~~~g~~~~vrL~~~l~G~~~~~~~~~~~~~~~~lG~~lArlh~al~~f~hp 155 (972)
T PRK06149 76 ALRHLAEREPALRVPVVIPALDGEELLTLDVRGQGLRVRLLDYLPGQPLTRLGHLAPASVAGLGALCARVARALADFDHP 155 (972)
T ss_pred HHHHHHhhCCCCCCceeeECCCCCeEEEEecCCceEEEEEEEecCCccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999998 76 477664211 11 689999998886532236678999999999999987644321
Q ss_pred ----chhHHH--HHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC--CCCcEEEEccCCCCCCeeeeCCC-C---
Q 024452 151 ----ALLWDR--LRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN--DHQEIGFCHNDLQYGNIMIDEET-S--- 218 (267)
Q Consensus 151 ----~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~--~~~~~~l~H~Dl~~~Nilv~~~~-~--- 218 (267)
...|.. .....+.+....... -....+.+.++.+.+.+.. ...+..+||||++..||++++++ +
T Consensus 156 ~~~r~~~Wdl~~~~~~~~~ll~~i~d~----~~r~~l~~~~~~~~~~l~~~~~~L~~g~IH~Dl~~~Nilv~~~~~~~~~ 231 (972)
T PRK06149 156 GLDRTLQWDLRHAGPVVAHLLSHITDP----AQRARIAEATRDAARRLQPLAPALPLQAVHLDITDDNVVGSRDADGRWQ 231 (972)
T ss_pred CCCCccccchhhhHHHHHHHHhhcCCH----HHHHHHHHHHHHHHHHhhhhhhhCcccccCCCCCcccEEEcCCCCCCcc
Confidence 011110 000001110000000 0112334444444433322 35688999999999999998642 1
Q ss_pred CEEEEeecccCcchHhHHHHhhhhhheeeeccCCchhHhHHHHHHh
Q 024452 219 SITIIVSFTFLQNMLNFKRACTKILLILTFSVNSPMVCMRWLRILC 264 (267)
Q Consensus 219 ~v~lIDwE~a~~~~~~fD~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (267)
..+||||++|.++++.||+|.+-..++..... .+.....|+++|.
T Consensus 232 v~giIDFgD~~~~~~i~DLAial~~~~~~~~~-dp~~~~~~l~GY~ 276 (972)
T PRK06149 232 PDGVIDFGDLVRTWRVADLAVTCASLLHHAGG-DPFSILPAVRAYH 276 (972)
T ss_pred eeEEEEcccchhhhHHHHHHHHHHHHhcccCC-CHHHHHHHHHHHH
Confidence 24899999999999999966433333321111 2333466888874
No 37
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.69 E-value=3.7e-16 Score=128.72 Aligned_cols=201 Identities=12% Similarity=0.195 Sum_probs=141.0
Q ss_pred HHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhC
Q 024452 16 ELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQ 95 (267)
Q Consensus 16 ~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~ 95 (267)
.+-+.+.+.++. .+....++++||..|+-|+|... ..+||+|.+......++ ..|+.-++.+++.
T Consensus 4 ~i~~qlse~~g~-------~~i~er~~v~gG~inea~~v~dg------~~~~FvK~n~~~~~~~f--~AEa~gL~~la~s 68 (286)
T COG3001 4 AISQQLSEQLGE-------GEIKEREEVSGGDINEAWRLRDG------TDPFFVKCNQREQLSMF--TAEADGLELLARS 68 (286)
T ss_pred HHHHHHHHHhCc-------hhhhcccccCCccccceeEeecC------CcceEEEecchhhHHHH--HHHHHHHHHHHhc
Confidence 345566666654 24457889999999999999742 47999999754322233 3899999999998
Q ss_pred C-C-CceEEEEECCe----eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCC------------CCchhH-HH
Q 024452 96 G-Q-GPRLLGRFGDG----RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGP------------RKALLW-DR 156 (267)
Q Consensus 96 g-l-~P~v~~~~~~~----~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~------------~~~~~~-~~ 156 (267)
+ + +|+|+..+... .|++|+|=.+++. .-..++|+.||+||+...+.. ..++.| ++
T Consensus 69 ~ti~VP~vi~~G~~~~~sylVle~L~~~~~d~------~~~~~~GqqLA~LH~~~~~~~fG~d~dn~iG~t~QpN~W~~~ 142 (286)
T COG3001 69 NTITVPKVIAVGASRDHSYLVLEYLPTGPLDA------HSAFILGQQLARLHQWGGQAQFGLDFDNYIGTTPQPNTWQRR 142 (286)
T ss_pred CCccccceEEecCCCCeeEEEEeeccCCCCCc------hhHHHHHHHHHHHHhhcCccccCcccccccCCCCCCCCCcch
Confidence 7 4 69999987532 8999998656653 236799999999999864311 123433 23
Q ss_pred HHHHHHHHh-----hccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcc
Q 024452 157 LRKWVSVAK-----SFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQN 231 (267)
Q Consensus 157 l~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~ 231 (267)
|..|+..-+ ++..+ +..++..+...++.+.+.+.+....+.++||||+.+|.++..+ + .+++|-- |.+|
T Consensus 143 Wa~FfaeqRig~qlqlar~---rg~~f~did~~~~~v~elL~~hqpqPsLlHGDLW~gN~a~~~~-G-Pv~fDPA-~y~G 216 (286)
T COG3001 143 WATFFAEQRIGWQLQLARE---RGLTFGDIDAIVEKIQELLADHQPQPSLLHGDLWSGNCAFGKD-G-PVIFDPA-CYWG 216 (286)
T ss_pred HHHHHHHhhhhHHHHHHHH---hCCCccCHHHHHHHHHHHHhcCCCCcceeecccccccccccCC-C-Ceeeccc-cccC
Confidence 444433211 01101 1224556666667777777666667899999999999999864 4 8999987 7789
Q ss_pred hHhHHHHhhhhh
Q 024452 232 MLNFKRACTKIL 243 (267)
Q Consensus 232 ~~~fD~A~~~~~ 243 (267)
+|++|+|++++.
T Consensus 217 DrE~Dlam~elF 228 (286)
T COG3001 217 DRECDLAMLELF 228 (286)
T ss_pred Ccccceehhhhh
Confidence 999999998874
No 38
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=2.2e-14 Score=111.52 Aligned_cols=143 Identities=23% Similarity=0.340 Sum_probs=105.2
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhC-CCCceEEEEECC----eeEEEee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQ-GQGPRLLGRFGD----GRVEEFI 114 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~-gl~P~v~~~~~~----~~v~e~i 114 (267)
+.++..|..|.+|++... +..+++|....... ..+...|..+++.++.. ...|+++..... .++++|+
T Consensus 3 ~~~i~~g~~~~v~~~~~~------~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK------DEDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred ceecccccccceEEEEec------CCeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 466889999999999853 37899998765432 12235899999999887 457888877653 2899999
Q ss_pred cCCCCCcc-cCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 115 HARTLSAA-DIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 115 ~G~~l~~~-~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
+|..+... ......+..++++.++.+|....
T Consensus 76 ~g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~------------------------------------------------ 107 (155)
T cd05120 76 EGETLDEVSEEEKEDIAEQLAELLAKLHQLPL------------------------------------------------ 107 (155)
T ss_pred CCeecccCCHHHHHHHHHHHHHHHHHHhCCCc------------------------------------------------
Confidence 99776532 01112345555556666665422
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhhh
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKIL 243 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~~ 243 (267)
.+++|+|++++||++++ .+.+.++||+.|.++++.+|.+++-+.
T Consensus 108 -----~~i~H~Dl~~~Nil~~~-~~~~~l~Df~~~~~~~~~~d~~~~~~~ 151 (155)
T cd05120 108 -----LVLCHGDLHPGNILVDD-GKILGIIDWEYAGYGPPAFDLAAALLF 151 (155)
T ss_pred -----eEEEecCCCcceEEEEC-CcEEEEEecccccCCChHHHHHHHHHH
Confidence 68999999999999997 467999999999999999998875443
No 39
>COG4857 Predicted kinase [General function prediction only]
Probab=99.41 E-value=5.8e-13 Score=112.65 Aligned_cols=217 Identities=15% Similarity=0.099 Sum_probs=130.1
Q ss_pred CcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEE-------EcCCCcccccCh-HHHHHHHHHHHhC--CCCceEEEEE
Q 024452 36 DALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVR-------IYGEGVEVFFNR-DDEIRTFECMSSQ--GQGPRLLGRF 105 (267)
Q Consensus 36 ~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlR-------i~~~~~~~~~dr-~~E~~~~~~l~~~--gl~P~v~~~~ 105 (267)
..+++..|..|--|-+|.|+-.. .++..++| .-+..+..-++| ..|+.++..=+++ |++|++|.++
T Consensus 31 s~ltvkEIGDGNlNyvF~V~~~~----~~ka~ivKQA~py~r~vGeswPL~l~Rs~iE~~aL~rq~~~aPh~VPeIyf~D 106 (408)
T COG4857 31 SHLTVKEIGDGNLNYVFIVEGKI----GGKAAIVKQALPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYFFD 106 (408)
T ss_pred cceEEEEecCCceeEEEEEecCC----CCeehhhhhhhhHHHhcCCcCCCcchHHHHHHHHHHHhhccCCCCcceeEeec
Confidence 66899999999999999997432 23455555 334444544555 4688888766655 6789999988
Q ss_pred CCe--eEEEeecCCCCCc----ccCCChHHHHHHHHHHHh--hccCCCCCCCCchhHHHHHHHHHHHhhccC-------c
Q 024452 106 GDG--RVEEFIHARTLSA----ADIRDPKISELVAAKMRE--FHDLKMPGPRKALLWDRLRKWVSVAKSFCS-------A 170 (267)
Q Consensus 106 ~~~--~v~e~i~G~~l~~----~~l~~~~i~~~la~~La~--lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~ 170 (267)
+.- .+||++.-...-+ +.-.-|++...+|..|++ |........+ ..-...+..|.+ .++|. .
T Consensus 107 e~mavivMEdls~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~-k~kK~~vk~FtN--pELCDItE~LVFt 183 (408)
T COG4857 107 EIMAVIVMEDLSPHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNT-KDKKADVKLFTN--PELCDITENLVFT 183 (408)
T ss_pred chhhhhhHhhhhHHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccch-HhHHHHHHHhCC--chhhcchhceeec
Confidence 743 7788874322211 111125677788888776 2222211110 000011111110 01110 0
Q ss_pred c-------------cccc-----cchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcch
Q 024452 171 K-------------DAKE-----FCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM 232 (267)
Q Consensus 171 ~-------------~~~~-----~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~ 232 (267)
+ +.++ +.-+.+.-++.+|++.+. .....+||||+|.|-|++++ ....+||-|||-|||
T Consensus 184 dPyfd~d~Nr~~~~~l~~fVe~L~~n~dlkvea~kLk~~F~--~~aetLiHGDLHsGSIfvte--~etkvIDPEFaFYGP 259 (408)
T COG4857 184 DPYFDADRNRHTIPQLDPFVEELRKNRDLKVEAQKLKHKFM--AYAETLIHGDLHSGSIFVTE--KETKVIDPEFAFYGP 259 (408)
T ss_pred CccccccccccccccchHHHHHHhcCcchhhhHHHHHHHHH--HHhHHHhccccccCcEEeec--CcceeeCccccccCc
Confidence 0 0000 011234444555665543 44567999999999999985 478999999999999
Q ss_pred HhHH-HHhhhhhheeeeccCCch-------hHhHHHHHH
Q 024452 233 LNFK-RACTKILLILTFSVNSPM-------VCMRWLRIL 263 (267)
Q Consensus 233 ~~fD-~A~~~~~~~~~~~~~~~~-------~~~~~~~~~ 263 (267)
.+|| ...+..+-+|++|+.-+| .++.||-.-
T Consensus 260 mafDiG~~iaNl~~~~~s~~g~~~~~~krd~~r~~L~e~ 298 (408)
T COG4857 260 MAFDIGMLIANLWMSLFSQKGFEEDSGKRDEMRAYLLEC 298 (408)
T ss_pred chhhHHHHHHHHHHHHHhhhchhhcccchHHHHHHHHHH
Confidence 9999 444555567888877776 345566543
No 40
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.30 E-value=5.7e-11 Score=97.78 Aligned_cols=133 Identities=15% Similarity=0.129 Sum_probs=91.6
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--ccc------Ch-HHHHHHHHHHHhCCC-CceEEEEECC--eeE
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFF------NR-DDEIRTFECMSSQGQ-GPRLLGRFGD--GRV 110 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~------dr-~~E~~~~~~l~~~gl-~P~v~~~~~~--~~v 110 (267)
|..|-.+.+|++... +..+++|....... ... .+ .+|.+++..+...|+ .|.++....+ .++
T Consensus 2 ig~G~~~~vy~~~~~------~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv 75 (199)
T TIGR03724 2 IAKGAEAIIYLGDFL------GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIV 75 (199)
T ss_pred CCCCceEEEEEeecC------CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE
Confidence 466778999999742 46788887543210 001 11 368999999998885 6888887765 389
Q ss_pred EEeecCCCCCcccCCCh-HHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDP-KISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~-~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
++|++|.++........ .++.++++.|+.+|+.
T Consensus 76 ~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~---------------------------------------------- 109 (199)
T TIGR03724 76 MEYIEGKPLKDVIEEGNDELLREIGRLVGKLHKA---------------------------------------------- 109 (199)
T ss_pred EEEECCccHHHHHhhcHHHHHHHHHHHHHHHHHC----------------------------------------------
Confidence 99999987653110011 3344444444444431
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
.++|+|++|+||+++ ++.+.+|||+.|..+.+..|.+.
T Consensus 110 ----------gi~H~Dl~~~Nil~~--~~~~~liDfg~a~~~~~~~~~~~ 147 (199)
T TIGR03724 110 ----------GIVHGDLTTSNIIVR--DDKLYLIDFGLGKYSDEIEDKAV 147 (199)
T ss_pred ----------CeecCCCCcceEEEE--CCcEEEEECCCCcCCCcHHhhhc
Confidence 379999999999998 36899999999999888887553
No 41
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=99.30 E-value=1.3e-10 Score=95.72 Aligned_cols=193 Identities=16% Similarity=0.133 Sum_probs=127.5
Q ss_pred EEEEEecCceee-eeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCC-CceEEEEECC----eeEE
Q 024452 38 LQVIPLKGAMTN-EVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQ-GPRLLGRFGD----GRVE 111 (267)
Q Consensus 38 ~~i~~l~~G~~N-~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl-~P~v~~~~~~----~~v~ 111 (267)
.+..++..|.+. .+|++.... ...+++|+-..+... .-+.|.+-+++++..|+ +|.|++...+ ++++
T Consensus 21 ~~w~~v~~geS~~~v~rl~a~~-----r~g~~~k~~~~~~~a--~L~~Ea~RlrWla~~~l~~P~V~~~~~~~~~~wLl~ 93 (266)
T COG3231 21 RRWRRVTEGESGAGVFRLFADS-----RPGLYLKIASSGPAA--ELEGEAARLRWLAGQGLGCPRVLGLEDDADQAWLLM 93 (266)
T ss_pred CccceeeccCCCCeEEEEeccC-----CCceEEEEecCcchh--hhhhHHHHHHHhcccCCCCCceEeeccCcchhHHhh
Confidence 345556656555 889987532 467788886544322 22489999999999998 5999998763 3889
Q ss_pred EeecCCCCCccc--CCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhc---cCcc--ccc-ccchhhHHH
Q 024452 112 EFIHARTLSAAD--IRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSF---CSAK--DAK-EFCLYTLKD 183 (267)
Q Consensus 112 e~i~G~~l~~~~--l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~--~~~-~~~~~~l~~ 183 (267)
.-++|.++.... +.....+..+|+.|+.||.+++..++ +-..+..+++.+... ..-. +.. ...-....+
T Consensus 94 salpG~~~s~~~~~~~p~r~v~~la~aLR~LH~l~~~aCP---Fd~rl~~rl~~a~~r~~a~~vdesdfd~e~qgr~~~E 170 (266)
T COG3231 94 SALPGEDASHPRYALDPKRAVPLLAEALRRLHELPVEACP---FDRRLARRLAKARARVRAGLVDESDFDEERQGRTAEE 170 (266)
T ss_pred hhcCCCcccchhhcCCHHHHHHHHHHHHHHHhcCChhhCC---cchHHHHHHHHHHHHHhccCCChhhcChhhcCCCHHH
Confidence 999999887644 33345788999999999998764332 112333444433211 1000 000 001123444
Q ss_pred HHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhh
Q 024452 184 EISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKI 242 (267)
Q Consensus 184 ~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~ 242 (267)
.++.|+... ....+.|+||||.=.=|+|+++. +--++||++..+++.|..|+|...+
T Consensus 171 l~d~L~~~r-p~~edLVv~HGDACLPN~i~d~~-rf~GfIDlGrlGVaDRh~DLala~~ 227 (266)
T COG3231 171 LFDELEARR-PAVEDLVVTHGDACLPNFILDGW-RFSGFIDLGRLGVADRHQDLALATW 227 (266)
T ss_pred HHHHHHhcC-CchhhceeecCcccCcceEecCC-ceEEeeecCcccchHHHHhHHHHHH
Confidence 555555433 34677999999999999999974 5568999999999999999554333
No 42
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=99.24 E-value=7.4e-11 Score=100.69 Aligned_cols=182 Identities=16% Similarity=0.137 Sum_probs=116.3
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHH---HHHHHHHhCCCCceEEEEEC--CeeEEEee-c
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEI---RTFECMSSQGQGPRLLGRFG--DGRVEEFI-H 115 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~---~~~~~l~~~gl~P~v~~~~~--~~~v~e~i-~ 115 (267)
++.+|.++.|+.|... ++...++|+..+.... ..|. .+++...-.|. .+++..++ +.+++|++ +
T Consensus 9 ~~~~g~~s~V~pv~~~-----dG~~avLKl~~p~~~~----~~E~~g~~~L~~w~G~Ga-Vrll~~d~~~~AlLLErl~~ 78 (253)
T PF04655_consen 9 PPAHGSSSLVVPVRRA-----DGTPAVLKLAPPHAEA----EHEARGEAALRWWNGRGA-VRLLAADPERGALLLERLDP 78 (253)
T ss_pred CCCCCcceEEEEEEcC-----CCCeEEEEecCCcccc----hhhhhHHhHhheeCCCCc-eeeeccccccchhhhhhccC
Confidence 4578999999999854 3689999998765421 1344 55776666664 58888874 33889999 6
Q ss_pred CCCCCcccC--CChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhH-HHHHHHHHHhC
Q 024452 116 ARTLSAADI--RDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTL-KDEISMLEKEL 192 (267)
Q Consensus 116 G~~l~~~~l--~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~l~~~l 192 (267)
|.++..-.. .+.+-...++..+++||....... |.-+..+.+|........... ... ....+ .......++.+
T Consensus 79 g~~L~~~~~~g~d~~a~~i~a~l~~~L~~~~~~~~--p~~l~~l~~~~~~l~~~~~~~-~~~-~~~~l~~~a~~~~~~Ll 154 (253)
T PF04655_consen 79 GRSLASLPREGDDDEATRIAAGLLRRLHRPAPEPL--PSGLPPLADWFARLFARARER-AGA-PPRRLVDAAAALARELL 154 (253)
T ss_pred CCchhhcccccCchHHHHHHHHHHHHHhCCCCCCC--CccchhHHHHHHHHHHHhHhh-hcc-ccHHHHHHHHHHHHHHh
Confidence 777764321 245667889999999999754221 121233444544332221110 000 11223 33333333333
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhh
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACT 240 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~ 240 (267)
....+.+++|||+|++|||-.+ .+.-..||-. .-.|.++||.+-+
T Consensus 155 -~~~~~~~lLHGDLH~~NIL~~~-~~~WlaIDPk-gl~Gdp~yd~a~~ 199 (253)
T PF04655_consen 155 -ASPGEEVLLHGDLHHGNILAAG-RRGWLAIDPK-GLVGDPAYDLAPL 199 (253)
T ss_pred -cCCCcceeeccccchHhhhccC-CCCceEeCCc-ccccccccCHHHH
Confidence 4556779999999999999775 2568899998 6679999997763
No 43
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=99.23 E-value=4.6e-10 Score=102.47 Aligned_cols=217 Identities=13% Similarity=0.136 Sum_probs=128.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCcEEEEEe--cCceeeeeEEEEeCCCC----CCCCceEEEEEcCCCc--------c---
Q 024452 15 EELKKVLQSVASDWGDVIDDSDALQVIPL--KGAMTNEVYQIAWPAKN----NGLARNVLVRIYGEGV--------E--- 77 (267)
Q Consensus 15 ~~~~~l~~~~~p~w~~~~~~~~~~~i~~l--~~G~~N~vy~v~~~~~~----~~~~~~~vlRi~~~~~--------~--- 77 (267)
+++.+-+++.+..=... ++..++..| ..|+...+.+|+....+ ..-..++++||...-. .
T Consensus 16 ~dve~~l~~~l~t~a~~---g~~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~~~~ 92 (414)
T PF07914_consen 16 EDVEEALQEALGTKAKF---GENKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMKFEG 92 (414)
T ss_pred HHHHHHHHHHhCCCcCc---CCCcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhcccc
Confidence 66777777776431111 244567777 46889999999864431 1125799999985210 0
Q ss_pred -cccCh---------------HHHHHHHHHHHhC---CC-CceEEEEEC-------Ce-eEEEeecCCC-CCcccCCChH
Q 024452 78 -VFFNR---------------DDEIRTFECMSSQ---GQ-GPRLLGRFG-------DG-RVEEFIHART-LSAADIRDPK 128 (267)
Q Consensus 78 -~~~dr---------------~~E~~~~~~l~~~---gl-~P~v~~~~~-------~~-~v~e~i~G~~-l~~~~l~~~~ 128 (267)
..++- -+|..+-+.+.+. ++ .|++|+.-+ .| +++||+++.. ...-.--+++
T Consensus 93 ~~~~~~e~~~~~~~~~l~~~HNrEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e~~~~e 172 (414)
T PF07914_consen 93 GKGFDEEKEWEEFEKFLREMHNREVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYENLSVE 172 (414)
T ss_pred ccccchhhHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccCCCCHH
Confidence 00000 1466666676665 33 599998642 14 8899999853 3322222345
Q ss_pred HHHHHHHHHHhhccCCCCCCC-------Cchh-HHH---------HHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 129 ISELVAAKMREFHDLKMPGPR-------KALL-WDR---------LRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 129 i~~~la~~La~lH~~~~~~~~-------~~~~-~~~---------l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
...+++++||+||+.....+. .+++ ... +..++........ ....+.+.+.++.++..
T Consensus 173 ql~~iv~aLA~~~A~sl~ls~ee~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~e~~~~~i~~~~~~ 247 (414)
T PF07914_consen 173 QLLQIVRALAKFHALSLKLSEEEKKSISGPDFLEEMFGEFFSEEGMKKIFENLRKIFG-----FFSPEKLEELIEKFEHY 247 (414)
T ss_pred HHHHHHHHHHHHHHhHccCCHHHhhhccCchHHHHHHHHHhchHHHHHHHHHHHhhcc-----ccChHHHHHHHHHHHHh
Confidence 678999999999998764211 1112 111 2222222211110 00123333333333322
Q ss_pred C-------------CCCCCcEEEEccCCCCCCeeeeCCCC---C-EEEEeecccCcchHhHHHHh
Q 024452 192 L-------------PNDHQEIGFCHNDLQYGNIMIDEETS---S-ITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 192 l-------------~~~~~~~~l~H~Dl~~~Nilv~~~~~---~-v~lIDwE~a~~~~~~fD~A~ 239 (267)
+ ...+.+.||||||+|+.|||++.+++ . ..||||..++.|.++.|++.
T Consensus 248 ~~~~~~~~~~~~i~~~lG~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~R 312 (414)
T PF07914_consen 248 LPDIKNFEKASNINKQLGIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLAR 312 (414)
T ss_pred cccHHhHHHHhhhHHhcCCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHH
Confidence 1 11356899999999999999997543 2 35999999999999999887
No 44
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.23 E-value=1.9e-10 Score=95.41 Aligned_cols=135 Identities=16% Similarity=0.109 Sum_probs=87.3
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--ccc-------ChHHHHHHHHHHHhCCC-CceEEEEECCe--
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFF-------NRDDEIRTFECMSSQGQ-GPRLLGRFGDG-- 108 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~-------dr~~E~~~~~~l~~~gl-~P~v~~~~~~~-- 108 (267)
..|..|....+|++... +..+++|+..+... ... ...+|.+++..+...|+ .|.++....+.
T Consensus 2 ~~l~~G~~~~vy~~~~~------~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 75 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFL------GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFI 75 (211)
T ss_pred cccccCceEEEEEEeeC------CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCE
Confidence 35678889999999742 46788887543221 001 12468888999988886 58887665432
Q ss_pred eEEEeecCCCCCcccCC----ChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHH
Q 024452 109 RVEEFIHARTLSAADIR----DPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDE 184 (267)
Q Consensus 109 ~v~e~i~G~~l~~~~l~----~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (267)
++++|++|.++...... ...++.+++..|+.+|
T Consensus 76 lv~e~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH------------------------------------------- 112 (211)
T PRK14879 76 IVMEYIEGEPLKDLINSNGMEELELSREIGRLVGKLH------------------------------------------- 112 (211)
T ss_pred EEEEEeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHH-------------------------------------------
Confidence 89999999876421000 0011111111111111
Q ss_pred HHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 185 ISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 185 ~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
...++|+|++|+|||++ ++.+.+|||+.|..+...+|.+.
T Consensus 113 -------------~~~i~H~Dl~p~Nil~~--~~~~~liDf~~a~~~~~~~~~~~ 152 (211)
T PRK14879 113 -------------SAGIIHGDLTTSNMILS--GGKIYLIDFGLAEFSKDLEDRAV 152 (211)
T ss_pred -------------hCCcccCCCCcccEEEE--CCCEEEEECCcccCCCcHHhhhc
Confidence 12479999999999998 35799999999999888877543
No 45
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=99.19 E-value=4.4e-10 Score=98.35 Aligned_cols=195 Identities=14% Similarity=0.125 Sum_probs=107.3
Q ss_pred CceeeeeEEEEeCC----CCCCCCceEEEEEcCCCcc--cccC----hHHHHHHHHHHH----hC--------CCCceEE
Q 024452 45 GAMTNEVYQIAWPA----KNNGLARNVLVRIYGEGVE--VFFN----RDDEIRTFECMS----SQ--------GQGPRLL 102 (267)
Q Consensus 45 ~G~~N~vy~v~~~~----~~~~~~~~~vlRi~~~~~~--~~~d----r~~E~~~~~~l~----~~--------gl~P~v~ 102 (267)
.|+...+|+|+... .......++|+|....... .... -.+|+.+-+.+. +. ...|+.|
T Consensus 3 d~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~~ 82 (294)
T PF02958_consen 3 DNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKCY 82 (294)
T ss_pred CcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceEE
Confidence 57788888887643 1122357899998752211 1111 146766554332 21 2468888
Q ss_pred EEEC----CeeEEEeec--C-CCCCcccCCChHHHHHHHHHHHhhccCCCCCC-CCc-------------hhHH-----H
Q 024452 103 GRFG----DGRVEEFIH--A-RTLSAADIRDPKISELVAAKMREFHDLKMPGP-RKA-------------LLWD-----R 156 (267)
Q Consensus 103 ~~~~----~~~v~e~i~--G-~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~-~~~-------------~~~~-----~ 156 (267)
+... .-+|+|-+. | +......--+.+-+..+.+.||+||+...... ..+ .... .
T Consensus 83 ~~~~~~~~~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l~~LA~fHA~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
T PF02958_consen 83 YADEDPGDEVLVLEDLSEKGYRMGDRRDGLDLEHAELVLKKLAKFHAASWALEEKDPELFEELSSGLFEEPFFREELEEW 162 (294)
T ss_pred EeccCCCceeeehhhhhhcCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhCchhhhhccccceeccchhhhhhHH
Confidence 8763 237888884 4 23333233345668899999999999863110 000 0000 1
Q ss_pred HHHHHH----HHhhcc-Ccc-ccccc--chhhHH-HHHHHHHHhC-CCCCCcEEEEccCCCCCCeeeeCCCC----CEEE
Q 024452 157 LRKWVS----VAKSFC-SAK-DAKEF--CLYTLK-DEISMLEKEL-PNDHQEIGFCHNDLQYGNIMIDEETS----SITI 222 (267)
Q Consensus 157 l~~~~~----~~~~~~-~~~-~~~~~--~~~~l~-~~~~~l~~~l-~~~~~~~~l~H~Dl~~~Nilv~~~~~----~v~l 222 (267)
...+.. ...+.. ... +.... .+..+. ...+.+.... .......|+||||+|.+|||+..++. .+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~~~~~l 242 (294)
T PF02958_consen 163 FEEFFEQGLKAFIESLDDEWPEYEEYSEKLEALLDKFFERMQELVDPSKEPFNVLCHGDFWTNNILFKYDDDGKPIDVVL 242 (294)
T ss_pred HHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHhccccCCceEEEcCccCHHhEeEcccccccccccee
Confidence 111111 110000 000 00000 011111 1222333333 23566789999999999999976422 5899
Q ss_pred EeecccCcchHhHHHHh
Q 024452 223 IVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 223 IDwE~a~~~~~~fD~A~ 239 (267)
|||..+++|++.+|++.
T Consensus 243 iDfQ~~~~g~p~~Dl~~ 259 (294)
T PF02958_consen 243 IDFQLARYGSPAIDLAY 259 (294)
T ss_pred eccccccCCCcHhHHHH
Confidence 99999999999999887
No 46
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.19 E-value=3.2e-10 Score=91.10 Aligned_cols=139 Identities=19% Similarity=0.168 Sum_probs=93.3
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccccC------h-HHHHHHHHHHHhCCC-CceEEEEECCe--e
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVFFN------R-DDEIRTFECMSSQGQ-GPRLLGRFGDG--R 109 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~~d------r-~~E~~~~~~l~~~gl-~P~v~~~~~~~--~ 109 (267)
++..|..+.+|...+- +..+++|.--+.. ...+| | .+|+.++..+...|+ +|.+|.++++. +
T Consensus 3 ~i~~GAEa~i~~~~~~------g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I 76 (204)
T COG3642 3 LIKQGAEAIIYLTDFL------GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLI 76 (204)
T ss_pred hhhCCcceeEEeeecc------CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEE
Confidence 4567888888888652 2457777532221 01112 2 479999999999997 59999999865 8
Q ss_pred EEEeecCCCCCcc-cCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHH
Q 024452 110 VEEFIHARTLSAA-DIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISML 188 (267)
Q Consensus 110 v~e~i~G~~l~~~-~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 188 (267)
+||||+|..+... .-..+++++++|+.+++||.
T Consensus 77 ~me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~---------------------------------------------- 110 (204)
T COG3642 77 VMEYIEGELLKDALEEARPDLLREVGRLVGKLHK---------------------------------------------- 110 (204)
T ss_pred EEEEeCChhHHHHHHhcchHHHHHHHHHHHHHHh----------------------------------------------
Confidence 9999999876521 00123444444444444443
Q ss_pred HHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhhhhe
Q 024452 189 EKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKILLI 245 (267)
Q Consensus 189 ~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~~~~ 245 (267)
..+||||+.+.||++.. +.+.+|||..+.++.-.=|.|. |+.+|
T Consensus 111 ----------~givHGDLTtsNiIl~~--~~i~~IDfGLg~~s~~~Ed~aV-Dl~Vl 154 (204)
T COG3642 111 ----------AGIVHGDLTTSNIILSG--GRIYFIDFGLGEFSDEVEDKAV-DLHVL 154 (204)
T ss_pred ----------cCeecCCCccceEEEeC--CcEEEEECCcccccccHHhhhc-hHHHH
Confidence 33899999999999984 4699999999987655555444 44443
No 47
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.10 E-value=1.2e-09 Score=91.77 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=88.2
Q ss_pred HHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccCh-------HHHHH
Q 024452 18 KKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFNR-------DDEIR 87 (267)
Q Consensus 18 ~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr-------~~E~~ 87 (267)
.++..+++.. .--.+..+++|.-+.||.+.. +.+++++|++.+.. ..+..+ ++|++
T Consensus 22 ~~~~~~~l~~--------~y~~~~~l~~~~f~~v~l~~~------~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 22 KEIFDDFLSY--------NIKTIKVFRNIDDTKVSLIDT------DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIV 87 (232)
T ss_pred HHHHHHHhhC--------ceEEEEEecCCCceEEEEEec------CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHH
Confidence 4555566532 333566778888899999753 24689999997542 222222 47888
Q ss_pred HHHHHHhCCC-CceEEEEEC----------CeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHH
Q 024452 88 TFECMSSQGQ-GPRLLGRFG----------DGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDR 156 (267)
Q Consensus 88 ~~~~l~~~gl-~P~v~~~~~----------~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~ 156 (267)
.+..+.+.|+ +|..+.... ..++|||++|.++... . .. ... .
T Consensus 88 ~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~-----------~-------~~------~~~---~ 140 (232)
T PRK10359 88 QTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDM-----------P-------EI------SED---V 140 (232)
T ss_pred HHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHh-----------h-------hc------cHH---H
Confidence 8899988897 476665432 1279999999876321 0 00 000 0
Q ss_pred HHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 157 LRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
. ..+...+..+ +...++|||++|+|+|++++ + +.||||..+..
T Consensus 141 ----~-----------------~~i~~~l~~l--------H~~gi~H~Dikp~Nili~~~-g-i~liDfg~~~~ 183 (232)
T PRK10359 141 ----K-----------------AKIKASIESL--------HQHGMVSGDPHKGNFIVSKN-G-LRIIDLSGKRC 183 (232)
T ss_pred ----H-----------------HHHHHHHHHH--------HHcCCccCCCChHHEEEeCC-C-EEEEECCCccc
Confidence 0 0111112222 23469999999999999974 4 99999876654
No 48
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.95 E-value=1.8e-08 Score=81.04 Aligned_cols=159 Identities=15% Similarity=0.095 Sum_probs=93.1
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc------ccccCh---HHHHHHHHHHHhCCC-CceEEEEECCe
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV------EVFFNR---DDEIRTFECMSSQGQ-GPRLLGRFGDG 108 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~------~~~~dr---~~E~~~~~~l~~~gl-~P~v~~~~~~~ 108 (267)
.+.++.+|....+++.... ++.+++|.-.+.. +..+.+ .+|+.++..+...|+ +|+++..+..+
T Consensus 11 ~l~likQGAEArv~~~~~~------Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~ 84 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS------GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG 84 (229)
T ss_pred cceeeeccceeeEeeeccC------CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 6788899999999998753 4788887533221 111222 478999988888997 69999988643
Q ss_pred --eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHH
Q 024452 109 --RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEIS 186 (267)
Q Consensus 109 --~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (267)
++|||++|-.....- +.. |.... . . + ..+.....
T Consensus 85 ~~i~ME~~~g~~~vk~~-----i~~---------~~~~~--~-~-d--------------------------~~~~~~~~ 120 (229)
T KOG3087|consen 85 GQIYMEFIDGASTVKDF-----ILS---------TMEDE--S-E-D--------------------------EGLAELAR 120 (229)
T ss_pred CeEEEEeccchhHHHHH-----HHH---------HccCc--c-c-c--------------------------hhHHHHHH
Confidence 899999883221100 000 00000 0 0 0 00011111
Q ss_pred HHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCE--EEEeecccCcchH----hHHHHhhhhhheeee
Q 024452 187 MLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSI--TIIVSFTFLQNML----NFKRACTKILLILTF 248 (267)
Q Consensus 187 ~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v--~lIDwE~a~~~~~----~fD~A~~~~~~~~~~ 248 (267)
.+.+.+ ..-+..-+|||||...|||+.+++.++ .+|||..+.++-. +-|+-+++-.++++-
T Consensus 121 ~iG~~i-gklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~~EDKgVDLYVlErA~lsTh 187 (229)
T KOG3087|consen 121 RIGELI-GKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSRLPEDKGVDLYVLERAVLSTH 187 (229)
T ss_pred HHHHHH-HHhhhCCeecccccccceEEecCCCcCceEEEeecchhcccCcccccceeeeehHhHhccC
Confidence 111111 112445599999999999998765554 8999999887543 333334444444443
No 49
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=98.92 E-value=2.9e-09 Score=91.01 Aligned_cols=172 Identities=14% Similarity=0.033 Sum_probs=102.5
Q ss_pred HHHHHHHHHHhCCC-CceEEEEEC-Ce-eEEEeecCCCCC-cccCCChHHHHHHHHHHHhhccCCCCCC---------CC
Q 024452 84 DEIRTFECMSSQGQ-GPRLLGRFG-DG-RVEEFIHARTLS-AADIRDPKISELVAAKMREFHDLKMPGP---------RK 150 (267)
Q Consensus 84 ~E~~~~~~l~~~gl-~P~v~~~~~-~~-~v~e~i~G~~l~-~~~l~~~~i~~~la~~La~lH~~~~~~~---------~~ 150 (267)
.=+++...|...|+ +|++++.+- .| .+.|-+--++.- ...-...+.....+..|+.+|....|.. ..
T Consensus 69 ~Fvai~~lL~~~Gv~vPqIla~Dld~GfllLedLG~e~~l~~~g~~~~ery~~a~~ll~~~h~~~~~~q~~~~~g~~~~l 148 (351)
T COG3178 69 PFVAIAGLLAGQGVRVPQILAADLDQGFLLLEDLGRETFLQALGEPIAERYAAADALLAAAHGALVPLQKAVREGSTHVL 148 (351)
T ss_pred HHHHHHHHHhcCCcCccHHhhhchhcCchhHhhcCcHHHHHhcCCCchhHHHHHHHHHHHHhcCcchhhcccCCCCCCcC
Confidence 45677889999997 699999874 45 555655333221 1111112345577889999999876521 11
Q ss_pred ch-----hH---HHHHHHH-HHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCC---C
Q 024452 151 AL-----LW---DRLRKWV-SVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEET---S 218 (267)
Q Consensus 151 ~~-----~~---~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~---~ 218 (267)
|. +. .-..+|+ .......... -.....+...+.|...+ ...+.|+||+|+|+.|+|+..+. +
T Consensus 149 p~fDr~am~~E~sLf~dWylpr~~g~~l~~----~~r~~~~aiwd~Lid~~--~~~~~vlvhRDfh~~NLmw~~~~~g~~ 222 (351)
T COG3178 149 PPFDRAAMRREASLFVDWYLPRHLGRPLTD----AERQAWEAIWDGLIDSL--LAQPKVLVHRDFHSRNLMWTADRAGAD 222 (351)
T ss_pred CcccHHHHHHHHHhhHHhhhHHHhCCCCCH----HHHHHHHHHHHHHHHHH--hcCCceeeeccccCccceecCCccCCC
Confidence 11 11 1123444 2111110000 01233444445554433 37889999999999999998642 3
Q ss_pred CEEEEeecccCcchHhHHHHhhhhhheeeeccCCchhHhHHHHHHh
Q 024452 219 SITIIVSFTFLQNMLNFKRACTKILLILTFSVNSPMVCMRWLRILC 264 (267)
Q Consensus 219 ~v~lIDwE~a~~~~~~fD~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (267)
++++|||.+|.+||.+||.||+-.=.+-+.+++. .-+|+.-||
T Consensus 223 rvGvlDFQDA~iGP~aYDvasL~~DArvt~~pe~---~~~~l~rY~ 265 (351)
T COG3178 223 RVGVLDFQDALIGPIAYDVASLLRDARVTWSPER---ELALLDRYW 265 (351)
T ss_pred CCceeehhhhhcCcchhhHHHHHhhccccCCHHH---HHHHHHHHH
Confidence 7999999999999999999985443343333333 446666665
No 50
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.91 E-value=2e-08 Score=85.48 Aligned_cols=128 Identities=21% Similarity=0.287 Sum_probs=79.9
Q ss_pred CceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-------ccc----c--Ch-HHHHHHHHHHHhCCC-CceEEEEEC--C
Q 024452 45 GAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-------EVF----F--NR-DDEIRTFECMSSQGQ-GPRLLGRFG--D 107 (267)
Q Consensus 45 ~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-------~~~----~--dr-~~E~~~~~~l~~~gl-~P~v~~~~~--~ 107 (267)
.|-.|++|+|... +..++||.+..+. ..+ . .+ .+|++++..|...|+ +|+++.... .
T Consensus 42 ~~g~gtv~~v~~~------~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 42 AKGRGTTWFVQTP------GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred CCCCccEEEEEeC------CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5668999999863 4789999885421 000 1 11 469999999999997 588887632 1
Q ss_pred ------eeEEEeecC-CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhh
Q 024452 108 ------GRVEEFIHA-RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYT 180 (267)
Q Consensus 108 ------~~v~e~i~G-~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 180 (267)
.+|+++++| .++.. + +.. ... . ... |. .
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~-----------~---l~~---~~l--~--~~~------~~------------------~ 150 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVA-----------L---LQE---APL--S--EEQ------WQ------------------A 150 (239)
T ss_pred CcceeeeEEEEecCCCCCHHH-----------H---Hhc---CCC--C--HHH------HH------------------H
Confidence 178999997 33321 1 110 000 0 010 10 1
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcch
Q 024452 181 LKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM 232 (267)
Q Consensus 181 l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~ 232 (267)
+...+..+ +..+++|+|++|+|||++++ +.+.||||+.|....
T Consensus 151 i~~~l~~l--------H~~GI~HrDlkp~NILv~~~-~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 151 IGQLIARF--------HDAGVYHADLNAHNILLDPD-GKFWLIDFDRGELRT 193 (239)
T ss_pred HHHHHHHH--------HHCCCCCCCCCchhEEEcCC-CCEEEEECCCcccCC
Confidence 11122222 23458999999999999874 579999999998754
No 51
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=98.88 E-value=4.3e-08 Score=86.70 Aligned_cols=193 Identities=11% Similarity=-0.033 Sum_probs=108.6
Q ss_pred eeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCC--CceEEEEECC-------e---eEEEeecCC
Q 024452 50 EVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQ--GPRLLGRFGD-------G---RVEEFIHAR 117 (267)
Q Consensus 50 ~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl--~P~v~~~~~~-------~---~v~e~i~G~ 117 (267)
.+..|.+ +++.+++|........- ......++++|+++|+ +|+++....+ | .+++|.+|+
T Consensus 20 ~~~~~~t------~~g~y~Lk~~e~~~~~~--l~f~~~~~~~L~~~G~~~v~~~i~tk~G~~~~~~~g~~y~L~~w~~~~ 91 (313)
T TIGR02905 20 RYEAFRA------NNQAYLIVPVDGLEEEE--LAELMAMSDYLQQAGDETVLELVKTKFGQSSALIDGVSYYLFKAPEFN 91 (313)
T ss_pred ceeeEEe------CCceEEEEEecCCCHHH--HHHHHHHHHHHHHcCCCcccceeecCCCCEeEEECCEEEEEEeCCCcc
Confidence 4556554 35789999884333211 1367788999999997 4777654321 2 667887665
Q ss_pred CCCcccCCChHHHHHHHHHHHhhccCCCCCCC----Cc---hhHHHHHHHHHHHhhc-------cCccccccc-------
Q 024452 118 TLSAADIRDPKISELVAAKMREFHDLKMPGPR----KA---LLWDRLRKWVSVAKSF-------CSAKDAKEF------- 176 (267)
Q Consensus 118 ~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~----~~---~~~~~l~~~~~~~~~~-------~~~~~~~~~------- 176 (267)
.... ..+|+.||+||........ .. ...+.+.+..+++... ....+.+..
T Consensus 92 ~~~~---------~~~~~~LA~lH~as~~f~~~~~~~~~~~~~~~~~~k~~~el~~~~~~~~~~~~~s~Fd~~fl~~~d~ 162 (313)
T TIGR02905 92 ERRG---------VDLGRELATFHKRGRQYPRPIWKKSRIGQWKELWAKRLDQLEDWWQSLLAQGPQTLFDEQFLETFPY 162 (313)
T ss_pred cchh---------HHHHHHHHHHHHhcCCCCCCccccccccccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHhHH
Confidence 5221 2899999999999764211 01 1112222222222111 110011111
Q ss_pred chhhHHHHHHHHHH-hCC---CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhhhhe-eeeccC
Q 024452 177 CLYTLKDEISMLEK-ELP---NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKILLI-LTFSVN 251 (267)
Q Consensus 177 ~~~~l~~~~~~l~~-~l~---~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~~~~-~~~~~~ 251 (267)
-+...+..++.+.+ .+. ......++||||+..+|+| . ++...+|+||++ ++++..|+|-+-.-++ -....+
T Consensus 163 ~~~~a~~ai~~l~~s~y~~~~~~~~~~~lCH~d~~~hn~l-~--~~~~~~i~~d~~-~D~~~~DL~~firk~~~k~~~~~ 238 (313)
T TIGR02905 163 YLGLTENAIQYAADTELDDEPGLADSGTICHERFGETTWL-E--RGGLIKPPTEWV-YDHPARDLAEWIRERYMGEIRQN 238 (313)
T ss_pred HHHHHHHHHHHHHHccchhhhhccccCccccCccCccccc-c--CCCeEecccccc-cccchhHHHHHHHHHHHHhcccc
Confidence 12233334444443 111 1234669999999999988 3 356888999954 8888999777544433 222111
Q ss_pred CchhHhHHHHHHh
Q 024452 252 SPMVCMRWLRILC 264 (267)
Q Consensus 252 ~~~~~~~~~~~~~ 264 (267)
- ..++.|+..|.
T Consensus 239 ~-~~~~~~l~~Y~ 250 (313)
T TIGR02905 239 Q-RAIASFLQEYE 250 (313)
T ss_pred H-HHHHHHHHHhh
Confidence 2 26788888775
No 52
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.86 E-value=4.9e-08 Score=80.30 Aligned_cols=104 Identities=17% Similarity=0.262 Sum_probs=64.9
Q ss_pred HHHHHHHHHHhCCC-CceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHH
Q 024452 84 DEIRTFECMSSQGQ-GPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVS 162 (267)
Q Consensus 84 ~E~~~~~~l~~~gl-~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~ 162 (267)
+|++.++.+.+.|+ +|+++....+.++||||.|..+....+.+ ... . . +.....
T Consensus 75 kE~r~L~rl~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd----------------~~~--~--~---~~~~~i-- 129 (197)
T cd05146 75 KEMHNLKRMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKD----------------AKL--N--D---EEMKNA-- 129 (197)
T ss_pred HHHHHHHHHHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhc----------------ccc--C--H---HHHHHH--
Confidence 79999999999996 69999987777999999875332211111 000 0 0 011111
Q ss_pred HHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc--chHhHH
Q 024452 163 VAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ--NMLNFK 236 (267)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~--~~~~fD 236 (267)
+.+.+..+...+ ....++||||.+.|||+++ +.+.||||.-|-. ++.+.+
T Consensus 130 ------------------~~~i~~~l~~l~----H~~glVHGDLs~~NIL~~~--~~v~iIDF~qav~~~hp~a~~ 181 (197)
T cd05146 130 ------------------YYQVLSMMKQLY----KECNLVHADLSEYNMLWHD--GKVWFIDVSQSVEPTHPHGLE 181 (197)
T ss_pred ------------------HHHHHHHHHHHH----HhCCeecCCCCHHHEEEEC--CcEEEEECCCceeCCCCCHHH
Confidence 111222222221 2346999999999999984 5799999998854 444444
No 53
>smart00090 RIO RIO-like kinase.
Probab=98.86 E-value=9.9e-08 Score=81.09 Aligned_cols=140 Identities=20% Similarity=0.275 Sum_probs=86.9
Q ss_pred EEecCceeeeeEEEE-eCCCCCCCCceEEEEEcCCCcccc-------------------------cChHHHHHHHHHHHh
Q 024452 41 IPLKGAMTNEVYQIA-WPAKNNGLARNVLVRIYGEGVEVF-------------------------FNRDDEIRTFECMSS 94 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~-~~~~~~~~~~~~vlRi~~~~~~~~-------------------------~dr~~E~~~~~~l~~ 94 (267)
++|..|....+|++. ... ++..+++|+........ ..-+.|++.++.+..
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~----~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 34 GCISTGKEANVYHALDFDG----SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred CeeccCcceeEEEEEecCC----CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 467888889999996 222 35789999875432100 001479999999988
Q ss_pred CCC-CceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccc
Q 024452 95 QGQ-GPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDA 173 (267)
Q Consensus 95 ~gl-~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 173 (267)
.++ .|+++......+|+||++|..+....+.+ . . ... .....+..
T Consensus 110 ~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~----------------~----~--~~~-~~~~~i~~----------- 155 (237)
T smart00090 110 AGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKD----------------V----E--PEE-EEEFELYD----------- 155 (237)
T ss_pred cCCCCCeeeEecCceEEEEEecCCccccccccc----------------C----C--cch-HHHHHHHH-----------
Confidence 776 58888766566999999997765321100 0 0 000 01111111
Q ss_pred cccchhhHHHHHHHHHHhCCCCCCcEE-EEccCCCCCCeeeeCCCCCEEEEeecccCc-chHh
Q 024452 174 KEFCLYTLKDEISMLEKELPNDHQEIG-FCHNDLQYGNIMIDEETSSITIIVSFTFLQ-NMLN 234 (267)
Q Consensus 174 ~~~~~~~l~~~~~~l~~~l~~~~~~~~-l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~-~~~~ 234 (267)
.+...+..+ .... ++|+|++|+||+++ ++.+.+|||..|.. +.+.
T Consensus 156 ------qi~~~l~~L--------H~~g~iiH~Dikp~NIli~--~~~i~LiDFg~a~~~~~~~ 202 (237)
T smart00090 156 ------DILEEMRKL--------YKEGELVHGDLSEYNILVH--DGKVVIIDVSQSVELDHPM 202 (237)
T ss_pred ------HHHHHHHHH--------HhcCCEEeCCCChhhEEEE--CCCEEEEEChhhhccCCcc
Confidence 112222222 2233 89999999999998 35799999999984 4444
No 54
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.85 E-value=2.1e-08 Score=82.34 Aligned_cols=134 Identities=19% Similarity=0.233 Sum_probs=81.7
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccC---------------------------hHHHHHHHHHHHh
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFN---------------------------RDDEIRTFECMSS 94 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~d---------------------------r~~E~~~~~~l~~ 94 (267)
.|..|-...||+.... ++..+++|+..++.....+ ...|++.+..+..
T Consensus 4 ~ig~G~~~~Vy~a~~~-----~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05147 4 CISTGKEANVYHATTA-----NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT 78 (190)
T ss_pred ccccccceEEEEEECC-----CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4677878999999753 3589999988654211111 0248899999988
Q ss_pred CCC-CceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccc
Q 024452 95 QGQ-GPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDA 173 (267)
Q Consensus 95 ~gl-~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 173 (267)
.|+ .|.++......+||||++|..+....+ .... .+ .+.+..+..
T Consensus 79 ~~v~~p~~~~~~~~~iVmE~i~g~~l~~~~~----------------~~~~------~~-~~~~~~i~~----------- 124 (190)
T cd05147 79 AGIPCPEPILLKSHVLVMEFIGDDGWAAPRL----------------KDAP------LS-ESKARELYL----------- 124 (190)
T ss_pred CCCCCCcEEEecCCEEEEEEeCCCCCcchhh----------------hcCC------CC-HHHHHHHHH-----------
Confidence 885 577665554569999999954331100 0000 01 011111111
Q ss_pred cccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 174 KEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 174 ~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.+...+..+- ....++|+|++|+|||+++ +.+.||||..|.
T Consensus 125 ------qi~~~L~~l~-------H~~giiHrDlkP~NIli~~--~~v~LiDFG~a~ 165 (190)
T cd05147 125 ------QVIQIMRILY-------QDCRLVHADLSEYNLLYHD--GKLYIIDVSQSV 165 (190)
T ss_pred ------HHHHHHHHHH-------HhCCcccCCCCHHHEEEEC--CcEEEEEccccc
Confidence 1112222221 1235999999999999984 579999999987
No 55
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.85 E-value=4.2e-08 Score=80.44 Aligned_cols=142 Identities=18% Similarity=0.185 Sum_probs=88.1
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccccc---------------------------ChHHHHHHHHHHH
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFF---------------------------NRDDEIRTFECMS 93 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~---------------------------dr~~E~~~~~~l~ 93 (267)
.+|..|-...||++... ++..+++|+..++..... ....|+..+..+.
T Consensus 3 ~~ig~G~~~~Vy~a~~~-----~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05145 3 GCISTGKEANVYHARTG-----DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY 77 (190)
T ss_pred ceeecCCCcEEEEEEcC-----CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 35778888999999753 358999999876521100 0136788888888
Q ss_pred hCCC-CceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCccc
Q 024452 94 SQGQ-GPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKD 172 (267)
Q Consensus 94 ~~gl-~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 172 (267)
..|+ .|.++......++|||++|..+.... + .. ... + .+....+..
T Consensus 78 ~~~i~~p~~~~~~~~~lVmE~~~g~~~~~~~---------l----~~---~~~------~-~~~~~~i~~---------- 124 (190)
T cd05145 78 EAGVPVPEPILLKKNVLVMEFIGDDGSPAPR---------L----KD---VPL------E-EEEAEELYE---------- 124 (190)
T ss_pred hCCCCCceEEEecCCEEEEEEecCCCchhhh---------h----hh---ccC------C-HHHHHHHHH----------
Confidence 8886 58888766556999999997432110 0 00 000 0 011111111
Q ss_pred ccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc--chHhHH
Q 024452 173 AKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ--NMLNFK 236 (267)
Q Consensus 173 ~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~--~~~~fD 236 (267)
.+...+..+- ....++|+|++|+|||++ ++.+.||||..|.. ++.+|+
T Consensus 125 -------~l~~~l~~lH-------~~~givHrDlkP~NIll~--~~~~~liDFG~a~~~~~~~~~~ 174 (190)
T cd05145 125 -------QVVEQMRRLY-------QEAGLVHGDLSEYNILYH--DGKPYIIDVSQAVELDHPNALE 174 (190)
T ss_pred -------HHHHHHHHHH-------HhCCEecCCCChhhEEEE--CCCEEEEEcccceecCCCCHHH
Confidence 1112222221 114699999999999998 36899999999976 555554
No 56
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.85 E-value=1.8e-08 Score=95.54 Aligned_cols=137 Identities=15% Similarity=0.142 Sum_probs=84.8
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCC---ccc-----ccCh-HHHHHHHHHHHhCCCC-ceEEEEECC--
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEG---VEV-----FFNR-DDEIRTFECMSSQGQG-PRLLGRFGD-- 107 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~---~~~-----~~dr-~~E~~~~~~l~~~gl~-P~v~~~~~~-- 107 (267)
...|..|-...||+..... ..+++|..... .+. ...+ .+|+++++.+...++. |.++...++
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~------~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLG------RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cceeccCCcEEEEEEeecC------ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 3556788889999987532 33333322111 000 0111 4789999999888864 666666543
Q ss_pred eeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHH
Q 024452 108 GRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISM 187 (267)
Q Consensus 108 ~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (267)
.+++||++|.++...-.....++.++++.|+.+|
T Consensus 412 ~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH---------------------------------------------- 445 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLH---------------------------------------------- 445 (535)
T ss_pred EEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------------
Confidence 3899999998764310000111222222222222
Q ss_pred HHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhh
Q 024452 188 LEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACT 240 (267)
Q Consensus 188 l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~ 240 (267)
...++|+|++|+|||++ ++.+.||||+.|......+|.|..
T Consensus 446 ----------~~giiHrDlkp~NILl~--~~~~~liDFGla~~~~~~~d~a~~ 486 (535)
T PRK09605 446 ----------KAGIVHGDLTTSNFIVR--DDRLYLIDFGLGKYSDLIEDKAVD 486 (535)
T ss_pred ----------hCCCccCCCChHHEEEE--CCcEEEEeCcccccCCchHhhhhh
Confidence 12489999999999995 357999999999999988886663
No 57
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=98.82 E-value=8.4e-09 Score=85.11 Aligned_cols=66 Identities=15% Similarity=0.000 Sum_probs=47.5
Q ss_pred CcEEEEccCCCCCCeeeeCCCC----CEEEEeecccCcchHhHHHHhhhhhheeeecc-CCchhHhHHHHHHhh
Q 024452 197 QEIGFCHNDLQYGNIMIDEETS----SITIIVSFTFLQNMLNFKRACTKILLILTFSV-NSPMVCMRWLRILCL 265 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~----~v~lIDwE~a~~~~~~fD~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 265 (267)
...++||||++++|+|++.++. .+.+|||+.|++|++++|++.+=+. ..+. ........+++.|.-
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~---~~~~~~r~~~~~~ll~~Y~~ 188 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLT---SLSVEIRREHFDELLKFYYE 188 (196)
T ss_pred CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHh---CCCHHHHHHHHHHHHHHHHH
Confidence 5689999999999999985322 5899999999999999998874332 1121 122335567777653
No 58
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.78 E-value=1.1e-07 Score=77.35 Aligned_cols=133 Identities=23% Similarity=0.318 Sum_probs=81.1
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccC-------------------------hHHHHHHHHHHHhCC
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFN-------------------------RDDEIRTFECMSSQG 96 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~d-------------------------r~~E~~~~~~l~~~g 96 (267)
+|..|-...+|++... ++..+++|++.+......+ ...|...+..+...|
T Consensus 4 ~lg~G~~g~Vy~a~~~-----~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~ 78 (187)
T cd05119 4 PIGTGKEADVYLALDG-----DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG 78 (187)
T ss_pred ccccccceeEEEEECC-----CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC
Confidence 4677888999999743 2578999987653211100 035677777777777
Q ss_pred C-CceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccc
Q 024452 97 Q-GPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKE 175 (267)
Q Consensus 97 l-~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 175 (267)
+ +|+++......++++|++|.......+.+ ... . +......
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~g~~~~~~~l~~-------------~~~---------~--~~~~~~~-------------- 120 (187)
T cd05119 79 VPVPKPIDLNRHVLVMEFIGGDGIPAPRLKD-------------VRL---------L--EDPEELY-------------- 120 (187)
T ss_pred CCCCceEecCCCEEEEEEeCCCCccChhhhh-------------hhh---------c--ccHHHHH--------------
Confidence 4 78888877667999999996643211100 000 0 0011111
Q ss_pred cchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 176 FCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 176 ~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.+.+..+... .....++|+|++|+||+++ ++.+.+|||+.|.
T Consensus 121 ------~~~~~~l~~l----h~~~~ivH~Dl~p~Nili~--~~~~~liDfg~a~ 162 (187)
T cd05119 121 ------DQILELMRKL----YREAGLVHGDLSEYNILVD--DGKVYIIDVPQAV 162 (187)
T ss_pred ------HHHHHHHHHH----hhccCcCcCCCChhhEEEE--CCcEEEEECcccc
Confidence 1111222211 1124689999999999999 3689999999885
No 59
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.77 E-value=5.7e-08 Score=82.64 Aligned_cols=130 Identities=22% Similarity=0.274 Sum_probs=89.4
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccc--------------------cCh---HHHHHHHHHHHhCCC-
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVF--------------------FNR---DDEIRTFECMSSQGQ- 97 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~--------------------~dr---~~E~~~~~~l~~~gl- 97 (267)
+|.-|=...+|.+..+ .+..+++|++.-+...+ +.| ++|+++|..|...|.
T Consensus 98 ~IGvGKEsdVY~~~~~-----~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 98 KIGVGKESDVYVAIDP-----KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred ccccCccceEEEEECC-----CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4555667888988754 36899999886543111 122 579999999999975
Q ss_pred CceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccc
Q 024452 98 GPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFC 177 (267)
Q Consensus 98 ~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 177 (267)
.|+++.......||++|+|..+..-.+ + . .++-+
T Consensus 173 VP~P~~~nRHaVvMe~ieG~eL~~~r~-~---------------------~--en~~~---------------------- 206 (304)
T COG0478 173 VPKPIAWNRHAVVMEYIEGVELYRLRL-D---------------------V--ENPDE---------------------- 206 (304)
T ss_pred CCCccccccceeeeehcccceeecccC-c---------------------c--cCHHH----------------------
Confidence 799999998999999999977764221 1 0 01000
Q ss_pred hhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 178 LYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 178 ~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.+...++.++..+ ..+++||||..-|||++++ +.+.+|||-=|-.
T Consensus 207 --il~~il~~~~~~~-----~~GiVHGDlSefNIlV~~d-g~~~vIDwPQ~v~ 251 (304)
T COG0478 207 --ILDKILEEVRKAY-----RRGIVHGDLSEFNILVTED-GDIVVIDWPQAVP 251 (304)
T ss_pred --HHHHHHHHHHHHH-----HcCccccCCchheEEEecC-CCEEEEeCccccc
Confidence 1112223333321 3569999999999999985 6899999987754
No 60
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.77 E-value=8.9e-08 Score=78.32 Aligned_cols=110 Identities=21% Similarity=0.236 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhCCC-CceEEEEECCeeEEEeec--CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHH
Q 024452 83 DDEIRTFECMSSQGQ-GPRLLGRFGDGRVEEFIH--ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRK 159 (267)
Q Consensus 83 ~~E~~~~~~l~~~gl-~P~v~~~~~~~~v~e~i~--G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~ 159 (267)
++|+++|..+.+.|+ +|+++.+.++-+|||||+ |.++..-. + .... . .. ..
T Consensus 56 ~~E~~~L~~l~~~Gv~vP~p~~~~~~~ivME~I~~~G~~~~~l~--~----------------~~~~-~--~~----~~- 109 (188)
T PF01163_consen 56 KKEFRNLKRLYEAGVPVPKPYDYNRNVIVMEYIGEDGVPLPRLK--D----------------VDLS-P--EE----PK- 109 (188)
T ss_dssp HHHHHHHHHCCCTT-SS--EEEEETTEEEEE--EETTEEGGCHH--H----------------CGGG-G--ST----HH-
T ss_pred HHHHHHHHHHHHCCccCCcEEEEeCCEEEEEecCCCccchhhHH--h----------------cccc-c--hh----HH-
Confidence 469999999999996 899999988889999999 76554210 0 0000 0 00 00
Q ss_pred HHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc--chHhHHH
Q 024452 160 WVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ--NMLNFKR 237 (267)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~--~~~~fD~ 237 (267)
..+.+.++.+...+ ....++|||+.+.|||+++ +++.+|||+-|.. ++.+.+.
T Consensus 110 -------------------~~~~~il~~~~~~~----~~~givHGDLs~~NIlv~~--~~~~iIDf~qav~~~~p~a~~~ 164 (188)
T PF01163_consen 110 -------------------ELLEEILEEIIKML----HKAGIVHGDLSEYNILVDD--GKVYIIDFGQAVDSSHPNAEEL 164 (188)
T ss_dssp -------------------HHHHHHHHHHHHHH----HCTTEEESS-STTSEEEET--TCEEE--GTTEEETTSTTHHHH
T ss_pred -------------------HHHHHHHHHHHHHH----HhcCceecCCChhhEEeec--ceEEEEecCcceecCCccHHHH
Confidence 01111222222222 1235999999999999996 3899999998754 5666665
Q ss_pred Hhhhhh
Q 024452 238 ACTKIL 243 (267)
Q Consensus 238 A~~~~~ 243 (267)
.--|+.
T Consensus 165 l~RDi~ 170 (188)
T PF01163_consen 165 LRRDIE 170 (188)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544443
No 61
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.72 E-value=3.2e-07 Score=75.52 Aligned_cols=129 Identities=20% Similarity=0.229 Sum_probs=81.3
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccc-----------------------cChHHHHHHHHHHHhCC-
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVF-----------------------FNRDDEIRTFECMSSQG- 96 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~-----------------------~dr~~E~~~~~~l~~~g- 96 (267)
.+|..|-...+|++... ++..+.+|+...+...+ .....|+.++..+...+
T Consensus 21 ~~i~~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 21 NQIGVGKESDVYLALDP-----DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred CccccCcceEEEEEEcC-----CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 55788888999999753 25789998754322000 01246788888887776
Q ss_pred CCceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCccccccc
Q 024452 97 QGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEF 176 (267)
Q Consensus 97 l~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 176 (267)
..|+++......++++|++|.++.... .. .. ...+..+
T Consensus 96 ~v~~~~~~~~~~lv~e~~~g~~L~~~~------------------~~-------~~----~~~~~~~------------- 133 (198)
T cd05144 96 PVPKPIDWNRHAVVMEYIDGVELYRVR------------------VL-------ED----PEEVLDE------------- 133 (198)
T ss_pred CCCceeecCCceEEEEEeCCcchhhcc------------------cc-------cc----HHHHHHH-------------
Confidence 468888765566999999997654210 00 00 0011111
Q ss_pred chhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 177 CLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 177 ~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+...+..+- ...++|+|++|+||++++ ++.+.||||..|.
T Consensus 134 ----i~~~l~~lh--------~~gi~H~Dl~p~Nill~~-~~~~~liDfg~~~ 173 (198)
T cd05144 134 ----ILEEIVKAY--------KHGIIHGDLSEFNILVDD-DEKIYIIDWPQMV 173 (198)
T ss_pred ----HHHHHHHHH--------HCCCCcCCCCcccEEEcC-CCcEEEEECCccc
Confidence 111111121 145999999999999987 4689999999984
No 62
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.68 E-value=1.3e-07 Score=87.37 Aligned_cols=164 Identities=17% Similarity=0.217 Sum_probs=97.6
Q ss_pred cCCCChHHHHHHHHHhCC-CCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccc--------
Q 024452 9 LPSSSPEELKKVLQSVAS-DWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVF-------- 79 (267)
Q Consensus 9 ~~~~~~~~~~~l~~~~~p-~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~-------- 79 (267)
.|..+.+.+++.+.+-+. .+..+. ..++-.|+..|-..+||+.++.+ +..++||+..++....
T Consensus 93 v~p~~~~~~~~~l~~elg~~~~~~F---~~fd~~plasaSigQVh~A~l~~-----G~~VaVKv~rp~i~~~i~~Dl~~l 164 (437)
T TIGR01982 93 VPPFDFKVARKVIEAALGGPLEELF---AEFEEKPLAAASIAQVHRARLVD-----GKEVAVKVLRPGIEKTIAADIALL 164 (437)
T ss_pred CCCCCHHHHHHHHHHHhCcCHHHHH---hhCCCcceeeeehhheEEEEecC-----CCEEEEEeeCCCcHHHHHHHHHHH
Confidence 455666778888877664 233222 22344689888899999998752 5899999987763111
Q ss_pred ---------------------------------cChHHHHHHHHHHHhC-----CC-CceEEEEEC--CeeEEEeecCCC
Q 024452 80 ---------------------------------FNRDDEIRTFECMSSQ-----GQ-GPRLLGRFG--DGRVEEFIHART 118 (267)
Q Consensus 80 ---------------------------------~dr~~E~~~~~~l~~~-----gl-~P~v~~~~~--~~~v~e~i~G~~ 118 (267)
+|..+|++.+..+++. ++ .|+++.... ..++|||++|.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~ 244 (437)
T TIGR01982 165 YRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIP 244 (437)
T ss_pred HHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcc
Confidence 1223455555555542 32 588876433 238999999988
Q ss_pred CCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCc
Q 024452 119 LSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQE 198 (267)
Q Consensus 119 l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~ 198 (267)
+... . .. ..... .. ..+... . ....+..+ ..
T Consensus 245 L~~~-------~-~~-------~~~~~----~~---~~ia~~---~----------------~~~~l~ql--------~~ 275 (437)
T TIGR01982 245 LSDI-------A-AL-------DEAGL----DR---KALAEN---L----------------ARSFLNQV--------LR 275 (437)
T ss_pred cccH-------H-HH-------HhcCC----CH---HHHHHH---H----------------HHHHHHHH--------Hh
Confidence 8641 0 00 00000 00 001000 0 00001111 12
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.+++|+|+||+||+++++ +.+.+|||..++.
T Consensus 276 ~g~~H~D~hPgNilv~~~-g~i~liDfG~~~~ 306 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKD-GKIIALDFGIVGR 306 (437)
T ss_pred CCceeCCCCcccEEECCC-CcEEEEeCCCeeE
Confidence 458999999999999874 6899999999875
No 63
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=98.67 E-value=2.5e-07 Score=76.15 Aligned_cols=164 Identities=17% Similarity=0.178 Sum_probs=97.1
Q ss_pred CCceEEEEEcCCCcccccChHHHHHHHHHHHhCC--CCceEEEEEC--Ce---eEEEeecCCCCCcccCCChHHHHHHHH
Q 024452 63 LARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQG--QGPRLLGRFG--DG---RVEEFIHARTLSAADIRDPKISELVAA 135 (267)
Q Consensus 63 ~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~g--l~P~v~~~~~--~~---~v~e~i~G~~l~~~~l~~~~i~~~la~ 135 (267)
+.++++||++......++ +-|.+.++.+.+.+ ++|+++...+ +| +|||+|+=+.+.. -+..+|+
T Consensus 34 DaG~~FvK~nr~~~~~mf--eGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime~idf~~lr~-------~~a~lG~ 104 (313)
T KOG3021|consen 34 DAGKVFVKVNRSIARDMF--EGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIMEHIDFQGLRS-------DAAKLGS 104 (313)
T ss_pred CCccEEEEeccccchHHH--hhHHHHHHHHHhcCceecCCceeeEecCCCceeeeeehhhcccchh-------HHHHHHH
Confidence 568999999765433333 37889999998876 4799887753 33 8999998554543 3678999
Q ss_pred HHHhhccCC-------------CC---------C----C--------CCc---hhHHHHHHHHHHHhhccCccc--cccc
Q 024452 136 KMREFHDLK-------------MP---------G----P--------RKA---LLWDRLRKWVSVAKSFCSAKD--AKEF 176 (267)
Q Consensus 136 ~La~lH~~~-------------~~---------~----~--------~~~---~~~~~l~~~~~~~~~~~~~~~--~~~~ 176 (267)
.||.||... +. + . ..| +.-++|..|+... ++....+ .+..
T Consensus 105 qlAdmHl~n~kl~e~r~~~~~tv~rgge~~e~~~v~~FGF~v~tccG~lpQvNdW~edW~eFf~rh-Rlq~Qldl~~~~~ 183 (313)
T KOG3021|consen 105 QLADMHLKNEKLAEARRTEAGTVGRGGEEGEQIGVENFGFHVVTCCGRLPQVNDWQEDWEEFFARH-RLQPQLDLLEKTY 183 (313)
T ss_pred HHHHHhhhhHHHHHHHHHhccccccCcccccccchhccceeeeeecccCcccccchhhHHHHHHHH-hhhHHHHHHHHhh
Confidence 999999221 10 0 0 001 1123344443321 1211110 0111
Q ss_pred -chhhHHHHHHHHH----HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 177 -CLYTLKDEISMLE----KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 177 -~~~~l~~~~~~l~----~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
+ ..+.+....|. ..+....--+++.|||+|.||+-.|.. +..+|.|-- +.||..+|+.+.
T Consensus 184 ~D-re~~el~~~L~~kia~Lf~~~eI~PaLlHGDLW~GNva~D~~-~ePiIfDPa-sfYgh~Efefgi 248 (313)
T KOG3021|consen 184 GD-REAFELWSILQTKIADLFKCLEILPALLHGDLWSGNVAEDGA-GEPIIFDPA-SFYGHSEFEFGI 248 (313)
T ss_pred cc-HHHHHHHHHHHHhhHHHhccceeehhhhccccccCcccccCC-CCceEeCch-hhcCCcHHHHHH
Confidence 1 11222222222 222233456789999999999887753 568888876 668999999654
No 64
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.65 E-value=2.5e-07 Score=83.27 Aligned_cols=133 Identities=20% Similarity=0.214 Sum_probs=83.3
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-----cc-ccChHHHHHHHHHHHhCCCCceEEEEECCeeEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-----EV-FFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-----~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~~v~e 112 (267)
-...|..|....||++..... .+..+.+|...... .. ...-.+|+++++.+...++.|.++......+++|
T Consensus 22 ~~~~IG~G~fg~Vy~a~~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~LVmE 98 (365)
T PRK09188 22 ETAVLKRDVFSTVERGYFAGD---PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGLVRG 98 (365)
T ss_pred EccEEeecCcEEEEEEEEcCC---CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEEEEE
Confidence 345567888899999975321 13445677643221 10 1112589999999998888888887654559999
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|..+.. . + +.. . ..|..+ +.+.+..+
T Consensus 99 ~~~G~~L~~--------~----------~----~~~---~-----~~~~~~-----------------i~~aL~~l---- 127 (365)
T PRK09188 99 WTEGVPLHL--------A----------R----PHG---D-----PAWFRS-----------------AHRALRDL---- 127 (365)
T ss_pred ccCCCCHHH--------h----------C----ccc---h-----HHHHHH-----------------HHHHHHHH----
Confidence 999966531 0 0 000 0 112211 11222222
Q ss_pred CCCCCcEEEEccCC-CCCCeeeeCCCCCEEEEeecccCc
Q 024452 193 PNDHQEIGFCHNDL-QYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl-~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
+...++|+|+ +|.|||++.+ +.+.|+||..|..
T Consensus 128 ----H~~gIiHrDL~KP~NILv~~~-~~ikLiDFGlA~~ 161 (365)
T PRK09188 128 ----HRAGITHNDLAKPQNWLMGPD-GEAAVIDFQLASV 161 (365)
T ss_pred ----HHCCCeeCCCCCcceEEEcCC-CCEEEEECcccee
Confidence 2236899999 8999999763 6799999999874
No 65
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=98.56 E-value=3.2e-07 Score=85.91 Aligned_cols=176 Identities=16% Similarity=0.200 Sum_probs=96.0
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCC--CceEEEEE----CCe---
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQ--GPRLLGRF----GDG--- 108 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl--~P~v~~~~----~~~--- 108 (267)
..+..+++..+|++..+ +.++++|+|..-. .-+| =|+++.++|.+.|+ .|.+++.. ++|
T Consensus 168 ~~~r~l~~EQSNtSi~~---------g~~~ilKlyRrl~-~G~n--Pe~E~~r~Lte~gf~~vP~llG~v~~~~~~g~~~ 235 (528)
T TIGR02457 168 PEVRLLSAEQSNSSLVV---------GDRVVLKLYRKVE-PGIN--PEIEMGRYLTAAGYANIPPLLGSVERVGGDQAPH 235 (528)
T ss_pred CceeecCCCcCceEEEE---------CCEEEEEEecccC-CCCC--cchHHHHHHHhCCCccCCcccEEEEEEcCCCCEE
Confidence 35677788889988888 3789999997532 1233 47788888988886 48777653 222
Q ss_pred ---eEEEeecCCC------CCc-----cc---------------CCC-hHHHHHHHHHHHhhccCCCC------CCCCch
Q 024452 109 ---RVEEFIHART------LSA-----AD---------------IRD-PKISELVAAKMREFHDLKMP------GPRKAL 152 (267)
Q Consensus 109 ---~v~e~i~G~~------l~~-----~~---------------l~~-~~i~~~la~~La~lH~~~~~------~~~~~~ 152 (267)
++++||++.. ++. +. +.. .+.++.||+..|.||..-.. +.+++-
T Consensus 236 tla~lq~fV~nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~aLA~~~~~~aF~pep~ 315 (528)
T TIGR02457 236 TLGLLQGYVQNQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHLALAAGGEDPAFAPEPI 315 (528)
T ss_pred eeehHhhhhCCCccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 6688987642 100 00 000 23478899999999986431 112221
Q ss_pred hHHHHHHHHHHHh-------h-ccCcc----cccccchhhHHHHHHHHHHhCCC-----CCCcEEEEccCCCCCCeeeeC
Q 024452 153 LWDRLRKWVSVAK-------S-FCSAK----DAKEFCLYTLKDEISMLEKELPN-----DHQEIGFCHNDLQYGNIMIDE 215 (267)
Q Consensus 153 ~~~~l~~~~~~~~-------~-~~~~~----~~~~~~~~~l~~~~~~l~~~l~~-----~~~~~~l~H~Dl~~~Nilv~~ 215 (267)
-....+.|+..+. . +.... +...-..+.+...-+.+...+.. ......=||||+|.||+|+.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~a~~~L~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~~~k~RiHGD~HLgqvL~t~ 395 (528)
T TIGR02457 316 STLYQRSWYQDMRAQAERALQLLAQSRDGLPAAARALADRLLAQRKELAAHLRPLVKREIDGLKIRIHGDFHLGQVLVVQ 395 (528)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcceEeEecCcchhcEEEeC
Confidence 1122233332221 1 10000 00000112222222233222211 122233499999999999986
Q ss_pred CCCCEEEEeecc
Q 024452 216 ETSSITIIVSFT 227 (267)
Q Consensus 216 ~~~~v~lIDwE~ 227 (267)
+ ...|||||-
T Consensus 396 ~--d~~IiDFEG 405 (528)
T TIGR02457 396 D--DAVLIDFEG 405 (528)
T ss_pred C--CeEEEcCCC
Confidence 3 467999995
No 66
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.54 E-value=3.4e-06 Score=70.28 Aligned_cols=143 Identities=20% Similarity=0.210 Sum_probs=81.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-------ccC---hHH
Q 024452 15 EELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-------FFN---RDD 84 (267)
Q Consensus 15 ~~~~~l~~~~~p~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-------~~d---r~~ 84 (267)
++-.++...++.. +--.+..+.+.--|.|.++.. ++++|++|.+.+.... ++- ..+
T Consensus 19 ~~y~~l~~~i~~~--------~~~~~kv~k~~~r~~ValIei------~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~ 84 (229)
T PF06176_consen 19 EKYLELGEKILDN--------NYKIIKVFKNTKRNYVALIEI------DGKKYILKEPREENRRPERRFKSFFKGSEYSR 84 (229)
T ss_pred hHHHHHHHHHHhC--------CceEEEeecCCCccEEEEEEE------CCcEEEEeccchhhhhHHHHHHHHhccHHHHH
Confidence 3445555555432 222344555555667777765 3689999998765311 110 123
Q ss_pred HHHHHHHHHhCCCC-c-eEEEEEC--------Ce-eEEEeecCCCCCcc-cCCChHHHHHHHHHHHhhccCCCCCCCCch
Q 024452 85 EIRTFECMSSQGQG-P-RLLGRFG--------DG-RVEEFIHARTLSAA-DIRDPKISELVAAKMREFHDLKMPGPRKAL 152 (267)
Q Consensus 85 E~~~~~~l~~~gl~-P-~v~~~~~--------~~-~v~e~i~G~~l~~~-~l~~~~i~~~la~~La~lH~~~~~~~~~~~ 152 (267)
++.....+.+.|+. | .++.... .. +++|||||..++.. ++. ..
T Consensus 85 l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~-------------------------e~ 139 (229)
T PF06176_consen 85 LINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIEDID-------------------------ED 139 (229)
T ss_pred HHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEEecCeecccchhcC-------------------------HH
Confidence 44455666677863 3 2222221 11 78999999988642 110 00
Q ss_pred hHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 153 LWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 153 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.. +.+.+.+.++ +..++.|||+||||+++.+ +++.+||+.....
T Consensus 140 ~~------------------------~ki~~~ikql--------H~~G~~HGD~hpgNFlv~~--~~i~iID~~~k~~ 183 (229)
T PF06176_consen 140 LA------------------------EKIVEAIKQL--------HKHGFYHGDPHPGNFLVSN--NGIRIIDTQGKRM 183 (229)
T ss_pred HH------------------------HHHHHHHHHH--------HHcCCccCCCCcCcEEEEC--CcEEEEECccccc
Confidence 00 1122222222 2246899999999999995 4699999987754
No 67
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.54 E-value=7.4e-07 Score=73.93 Aligned_cols=130 Identities=18% Similarity=0.172 Sum_probs=80.5
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccC--h-HHHHHHHHHHHhCCCCceEEEEECCeeEEEe
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFN--R-DDEIRTFECMSSQGQGPRLLGRFGDGRVEEF 113 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~d--r-~~E~~~~~~l~~~gl~P~v~~~~~~~~v~e~ 113 (267)
....+..|.=.++|.+.. .+.+++.|-.....- ..+. + .+|+++++.|....-.|+++.......+++|
T Consensus 6 ~~~~l~~~~f~~v~~~~~------~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmey 79 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG------GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSY 79 (218)
T ss_pred cceeecCCCcceEEEeec------CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEee
Confidence 345566666688997753 246776665433321 1111 1 4799999999877667999887555589999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
|+|.++... .+.. . . .+..+ +...++.+
T Consensus 80 I~G~~L~~~----------------------~~~~---~----~-~~~~q-----------------i~~~L~~l----- 107 (218)
T PRK12274 80 LAGAAMYQR----------------------PPRG---D----L-AYFRA-----------------ARRLLQQL----- 107 (218)
T ss_pred ecCccHHhh----------------------hhhh---h----H-HHHHH-----------------HHHHHHHH-----
Confidence 998765310 0000 0 0 01111 11112222
Q ss_pred CCCCcEEEEccCC-CCCCeeeeCCCCCEEEEeecccCc
Q 024452 194 NDHQEIGFCHNDL-QYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 194 ~~~~~~~l~H~Dl-~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
+..+++|+|+ +|+|||++++ +.+.||||..|..
T Consensus 108 ---H~~GIvHrDL~kp~NILv~~~-g~i~LIDFG~A~~ 141 (218)
T PRK12274 108 ---HRCGVAHNDLAKEANWLVQED-GSPAVIDFQLAVR 141 (218)
T ss_pred ---HHCcCccCCCCCcceEEEcCC-CCEEEEECCCcee
Confidence 2346999999 6999999864 6799999999975
No 68
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.54 E-value=5e-07 Score=75.09 Aligned_cols=65 Identities=17% Similarity=0.147 Sum_probs=40.1
Q ss_pred CcEEEEccCCCCCCeeeeCCC--CCEEEEeecccCcchHhHHHHhhhhhheeeeccCCchhHhHHHH
Q 024452 197 QEIGFCHNDLQYGNIMIDEET--SSITIIVSFTFLQNMLNFKRACTKILLILTFSVNSPMVCMRWLR 261 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~--~~v~lIDwE~a~~~~~~fD~A~~~~~~~~~~~~~~~~~~~~~~~ 261 (267)
+..+++|+|++++|||+++++ ..+.+||||.+..........+-|+.-+.............|.+
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~~~~~~~~dL~~L~rs~~~~~~~~~d~~~ 201 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPSSRRWRAKDLARLLRSLLRSGWSERDRQR 201 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCCChHHHHHhHHHHHHhccccCCCHHHHHH
Confidence 445699999999999999752 15899999999886633333333433333322233333444444
No 69
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.54 E-value=1.9e-07 Score=87.27 Aligned_cols=164 Identities=15% Similarity=0.207 Sum_probs=103.8
Q ss_pred cCCCChHHHHHHHHHhCC-CCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccccc-------
Q 024452 9 LPSSSPEELKKVLQSVAS-DWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFF------- 80 (267)
Q Consensus 9 ~~~~~~~~~~~l~~~~~p-~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~------- 80 (267)
.|+.+-+.+.+++.+.+. .|..+. +.++-.|+.++--.+||+..+.+ ++.++||+..++....+
T Consensus 101 vpp~~~~~~~~iie~eLG~~iee~F---~eF~~~PiAsASIaQVH~A~L~s-----G~~VAVKVqrPgi~~~i~~DL~il 172 (517)
T COG0661 101 VPPFPFEEAERIIEEELGRPIEELF---SEFEPEPIASASIAQVHRAVLKS-----GEEVAVKVQRPGIRERIEADLKLL 172 (517)
T ss_pred CCCCCHHHHHHHHHHHhCCCHHHHH---HHcCCCchhhhhHhhheeEEecC-----CCEEEEEecCCChHHHHHHHHHHH
Confidence 577777888888888875 455433 23455788777788999998863 58999999988742211
Q ss_pred ----------------------------------ChHHHHHHHHHHHhC-----C-CCceEEEEECCe--eEEEeecCCC
Q 024452 81 ----------------------------------NRDDEIRTFECMSSQ-----G-QGPRLLGRFGDG--RVEEFIHART 118 (267)
Q Consensus 81 ----------------------------------dr~~E~~~~~~l~~~-----g-l~P~v~~~~~~~--~v~e~i~G~~ 118 (267)
|..+|+..+..++++ . ..|+||+-..+. ++||||+|-.
T Consensus 173 ~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~ 252 (517)
T COG0661 173 RRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIK 252 (517)
T ss_pred HHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEe
Confidence 233466666666653 2 268888754333 7899999988
Q ss_pred CCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCc
Q 024452 119 LSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQE 198 (267)
Q Consensus 119 l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~ 198 (267)
++.-.. . .+.. .+. +.+..- -....++++ ..
T Consensus 253 i~d~~~-----l----------~~~g------~d~-k~ia~~-------------------~~~~f~~q~--------~~ 283 (517)
T COG0661 253 ISDIAA-----L----------KSAG------IDR-KELAEL-------------------LVRAFLRQL--------LR 283 (517)
T ss_pred cccHHH-----H----------HhcC------CCH-HHHHHH-------------------HHHHHHHHH--------Hh
Confidence 875210 0 0000 010 001000 001111111 22
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.+|.|+|+|||||+++.+ +.+.++||...+.
T Consensus 284 dgffHaDpHpGNi~v~~~-g~i~~lDfGi~g~ 314 (517)
T COG0661 284 DGFFHADPHPGNILVRSD-GRIVLLDFGIVGR 314 (517)
T ss_pred cCccccCCCccceEEecC-CcEEEEcCcceec
Confidence 459999999999999985 7899999998876
No 70
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.53 E-value=3.5e-07 Score=86.05 Aligned_cols=105 Identities=13% Similarity=0.128 Sum_probs=69.9
Q ss_pred cCCCChHHHHHHHHHhCC-CCCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccc--------
Q 024452 9 LPSSSPEELKKVLQSVAS-DWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVF-------- 79 (267)
Q Consensus 9 ~~~~~~~~~~~l~~~~~p-~w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~-------- 79 (267)
.|..+.+.+++.+.+-+. .|..+. +.++..|+..|-..+||+....+ ++..++||+-.++....
T Consensus 95 vpp~~~~~~~~~ie~elG~~~~~~F---~~fd~~PlasaSiaQVh~A~l~~----~G~~VAVKV~rP~i~~~I~~Dl~~l 167 (537)
T PRK04750 95 VPPFDGALARAIIEKALGGPVEEWF---DDFDIKPLASASIAQVHFARLKD----NGREVVVKVLRPDILPVIDADLALM 167 (537)
T ss_pred CCCCCHHHHHHHHHHHhCCCHHHHH---HhcChhhhcCCCccEEEEEEECC----CCCEEEEEEeCcchHHHHHHHHHHH
Confidence 466677888888887763 344332 23556899999999999998753 25899999987663110
Q ss_pred ---------------------------------cChHHHHHHHHHHHhC-----C-CCceEEEEEC--CeeEEEeecCCC
Q 024452 80 ---------------------------------FNRDDEIRTFECMSSQ-----G-QGPRLLGRFG--DGRVEEFIHART 118 (267)
Q Consensus 80 ---------------------------------~dr~~E~~~~~~l~~~-----g-l~P~v~~~~~--~~~v~e~i~G~~ 118 (267)
+|..+|.+.+..+++. . ..|++|+-.. .-++|||++|.+
T Consensus 168 ~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~ 247 (537)
T PRK04750 168 YRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIP 247 (537)
T ss_pred HHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCcc
Confidence 2333455555555542 1 2588887533 238999999988
Q ss_pred CC
Q 024452 119 LS 120 (267)
Q Consensus 119 l~ 120 (267)
++
T Consensus 248 l~ 249 (537)
T PRK04750 248 VS 249 (537)
T ss_pred HH
Confidence 75
No 71
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.40 E-value=6.4e-06 Score=71.19 Aligned_cols=47 Identities=11% Similarity=0.036 Sum_probs=34.0
Q ss_pred CcEEEEccCCCCCCeeeeCC------CCCEEEEeecccCc------chHhHHHHhhhhh
Q 024452 197 QEIGFCHNDLQYGNIMIDEE------TSSITIIVSFTFLQ------NMLNFKRACTKIL 243 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~------~~~v~lIDwE~a~~------~~~~fD~A~~~~~ 243 (267)
+..+++|+|++++|||++.+ +..+.+||+|.+.. ..+.-|.+.+.+.
T Consensus 155 H~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~~~~~~~~~r~~dL~~L~~s 213 (268)
T PRK15123 155 HAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQIRARVPRRWRDKDLAGLYFS 213 (268)
T ss_pred HHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccccCCCChHHHHHHHHHHHHH
Confidence 45669999999999999841 24689999998843 2445666665443
No 72
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.35 E-value=3.2e-06 Score=68.32 Aligned_cols=138 Identities=17% Similarity=0.169 Sum_probs=81.0
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeecC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIHA 116 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~G 116 (267)
|.+|..+.+|++.... .+..+++|++...... .....+|++.++.+...++ ++++..... .++++|++|
T Consensus 1 l~~g~~~~v~~~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKK----TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNI-VKLYGVFEDENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecC----CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCe-eeEeeeeecCCeEEEEEecCCC
Confidence 3567889999998643 3589999998765431 1112478888888866333 444444432 288999998
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
.++.. .+...+ . . .+ ......+.. .+...+..+.+
T Consensus 76 ~~l~~--------------~~~~~~---~--~--~~-~~~~~~~~~-----------------~l~~~l~~lh~------ 110 (215)
T cd00180 76 GSLKD--------------LLKENE---G--K--LS-EDEILRILL-----------------QILEGLEYLHS------ 110 (215)
T ss_pred CcHHH--------------HHHhcc---C--C--CC-HHHHHHHHH-----------------HHHHHHHHHHh------
Confidence 54432 111111 0 0 01 111111221 12222233322
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcch
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM 232 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~ 232 (267)
..++|+|++++||++++.++.+.|+||+.+....
T Consensus 111 --~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~ 144 (215)
T cd00180 111 --NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLT 144 (215)
T ss_pred --CCeeccCCCHhhEEEeCCCCcEEEecCCceEEcc
Confidence 2699999999999999723679999999887543
No 73
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.34 E-value=3.4e-06 Score=75.55 Aligned_cols=133 Identities=17% Similarity=0.185 Sum_probs=79.4
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-c-cChHHHHHHHHHHHhCCCCceEEEEECC-e---eEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-F-FNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v~e 112 (267)
.+..|..|....||++.... ++..|++|+....... . ....+|+++++.+..-++. +++..+.+ + +++|
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRP----TGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVV-KCHDMFDHNGEIQVLLE 152 (353)
T ss_pred hhhhccCCCCeEEEEEEECC----CCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcc-eeeeEeccCCeEEEEEe
Confidence 34567888889999997543 3578999987443211 1 1124688888777644443 34444432 2 7899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|..+....... ...+..+.. .+...++.|-+
T Consensus 153 ~~~~~~L~~~~~~~---------------------------~~~~~~i~~-----------------qi~~aL~~LH~-- 186 (353)
T PLN00034 153 FMDGGSLEGTHIAD---------------------------EQFLADVAR-----------------QILSGIAYLHR-- 186 (353)
T ss_pred cCCCCcccccccCC---------------------------HHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 99987653211000 001111111 12223333322
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|+++.|||++++ +.+.|+||..+.
T Consensus 187 ------~~ivHrDlkp~NIll~~~-~~~kL~DfG~~~ 216 (353)
T PLN00034 187 ------RHIVHRDIKPSNLLINSA-KNVKIADFGVSR 216 (353)
T ss_pred ------CCEeecCCCHHHEEEcCC-CCEEEcccccce
Confidence 248999999999999874 689999998764
No 74
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.33 E-value=1.8e-06 Score=73.15 Aligned_cols=136 Identities=18% Similarity=0.209 Sum_probs=82.3
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccCh---HHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNR---DDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr---~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
+..|..|....||++.... ++..+++|+..........+ ..|+.+++.+....+ ++++.... +. ++++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKK----NGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNI-VQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEESSEEEEEEEETT----TTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTB-CHEEEEEEESSEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECC----CCeEEEEEEeccccccccccchhhhhhhcccccccccc-cccccccccccccccccc
Confidence 5677888889999998654 35789999986553221111 248888888843333 45555543 22 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
+++|.++.. ... . .. ..+ ...+..+.. .+.+.+..|.+.
T Consensus 79 ~~~~~~L~~-------~l~----------~----~~-~~~-~~~~~~~~~-----------------qi~~~L~~Lh~~- 117 (260)
T PF00069_consen 79 YCPGGSLQD-------YLQ----------K----NK-PLS-EEEILKIAY-----------------QILEALAYLHSK- 117 (260)
T ss_dssp EETTEBHHH-------HHH----------H----HS-SBB-HHHHHHHHH-----------------HHHHHHHHHHHT-
T ss_pred ccccccccc-------ccc----------c----cc-ccc-ccccccccc-----------------cccccccccccc-
Confidence 999864431 111 0 00 001 111221211 122233344321
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||++++ ++.+.|+||+.+.
T Consensus 118 -------~i~H~dikp~NIl~~~-~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 118 -------GIVHRDIKPENILLDE-NGEVKLIDFGSSV 146 (260)
T ss_dssp -------TEEESSBSGGGEEEST-TSEEEESSGTTTE
T ss_pred -------cccccccccccccccc-ccccccccccccc
Confidence 5899999999999996 4689999999885
No 75
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.28 E-value=2.8e-05 Score=65.69 Aligned_cols=154 Identities=22% Similarity=0.256 Sum_probs=96.2
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccccc-----------------Ch--------HHHHHHHHHHHhCC
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFF-----------------NR--------DDEIRTFECMSSQG 96 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~-----------------dr--------~~E~~~~~~l~~~g 96 (267)
+|+.|=...||+.... ++..+.+|+|...+..+- ++ .+|+..|+.+.+.|
T Consensus 55 ~istGKEA~Vy~a~~~-----~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAG 129 (268)
T COG1718 55 CISTGKEANVYLAETG-----DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAG 129 (268)
T ss_pred eecCCcceEEEeeccC-----CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6788889999997532 357888999865432111 21 35888999999999
Q ss_pred C-CceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccc
Q 024452 97 Q-GPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKE 175 (267)
Q Consensus 97 l-~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 175 (267)
+ +|+++...++-+|||||.........|.+. +..+. .....
T Consensus 130 VrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv--------------------~~e~~---e~~~~--------------- 171 (268)
T COG1718 130 VRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDV--------------------PLELE---EAEGL--------------- 171 (268)
T ss_pred CCCCCceeecCCeEEEEeccCCCCCCCCcccC--------------------CcCch---hHHHH---------------
Confidence 7 699999887779999997653322233221 00110 01111
Q ss_pred cchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc--chHhHHHHhhhhh-heeeec
Q 024452 176 FCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ--NMLNFKRACTKIL-LILTFS 249 (267)
Q Consensus 176 ~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~--~~~~fD~A~~~~~-~~~~~~ 249 (267)
++..++.++..+ ....++||||..-|||+.+ +.++||||-=|-. +|-+++..--|+- |..||.
T Consensus 172 -----~~~~v~~~~~l~----~~a~LVHgDLSEyNiL~~~--~~p~iID~~QaV~~~hp~a~e~L~RDv~Ni~~fF~ 237 (268)
T COG1718 172 -----YEDVVEYMRRLY----KEAGLVHGDLSEYNILVHD--GEPYIIDVSQAVTIDHPNAFEFLERDVRNIARFFR 237 (268)
T ss_pred -----HHHHHHHHHHHH----HhcCcccccchhhheEEEC--CeEEEEECccccccCCCchHHHHHHHHHHHHHHHH
Confidence 112222233222 1234999999999999993 5899999998754 6666664433332 344444
No 76
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.27 E-value=3.6e-06 Score=77.13 Aligned_cols=139 Identities=13% Similarity=0.094 Sum_probs=87.5
Q ss_pred CcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEECCe---
Q 024452 36 DALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFGDG--- 108 (267)
Q Consensus 36 ~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~--- 108 (267)
+.-.+.+|..|.-.+||.++-.+ .+.-|.+|+-.+.. ........|..+|.. ++.....++|+.+.+.
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~----Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKD----TGEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cchhheeeccccceeEEEEEEcc----CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cCCCcEEEEEEEecCCCee
Confidence 34457888999999999998543 36788899876532 001112356666655 4445667888888654
Q ss_pred -eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHH-HHHhhccCcccccccchhhHHHHHH
Q 024452 109 -RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWV-SVAKSFCSAKDAKEFCLYTLKDEIS 186 (267)
Q Consensus 109 -~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (267)
+||||+||..+. ..|.+.-. +-+.+.+++ .. +.-.++
T Consensus 217 YLiMEylPGGD~m--------------TLL~~~~~----------L~e~~arfYiaE-----------------~vlAI~ 255 (550)
T KOG0605|consen 217 YLIMEYLPGGDMM--------------TLLMRKDT----------LTEDWARFYIAE-----------------TVLAIE 255 (550)
T ss_pred EEEEEecCCccHH--------------HHHHhcCc----------CchHHHHHHHHH-----------------HHHHHH
Confidence 899999985432 12211111 112233222 11 111122
Q ss_pred HHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 187 MLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 187 ~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.+ +..+++|+|++|.|+|+|.. |-+.|=||..|.
T Consensus 256 ~i--------H~~gyIHRDIKPdNlLiD~~-GHiKLSDFGLs~ 289 (550)
T KOG0605|consen 256 SI--------HQLGYIHRDIKPDNLLIDAK-GHIKLSDFGLST 289 (550)
T ss_pred HH--------HHcCcccccCChhheeecCC-CCEeeccccccc
Confidence 22 44669999999999999985 679999999995
No 77
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.22 E-value=8e-06 Score=72.21 Aligned_cols=137 Identities=16% Similarity=0.117 Sum_probs=78.3
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~ 111 (267)
+..|..|....||++.... .+..+.+|+..... ........|..++..+......+.++..+. +. +|+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKG----TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred EEEEeeccCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 5667778889999998543 35689999875421 111111356666666654444555555543 22 889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||++|.++.. .+.+ .. . .. ......|.. .+...+..+-+
T Consensus 81 E~~~~g~L~~--------------~~~~---~~----~-~~-~~~~~~~~~-----------------qi~~al~~lH~- 119 (324)
T cd05587 81 EYVNGGDLMY--------------HIQQ---VG----K-FK-EPHAVFYAA-----------------EIAIGLFFLHS- 119 (324)
T ss_pred cCCCCCcHHH--------------HHHH---cC----C-CC-HHHHHHHHH-----------------HHHHHHHHHHH-
Confidence 9998865421 0100 00 0 00 011111221 12223333322
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 120 -------~~ivH~dlkp~Nill~~~-~~~kL~Dfg~~~ 149 (324)
T cd05587 120 -------KGIIYRDLKLDNVMLDAE-GHIKIADFGMCK 149 (324)
T ss_pred -------CCeEecCCCHHHeEEcCC-CCEEEeecCcce
Confidence 359999999999999874 689999999764
No 78
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.21 E-value=1.5e-05 Score=68.71 Aligned_cols=141 Identities=11% Similarity=0.105 Sum_probs=81.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEE-----CC----eeE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRF-----GD----GRV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~-----~~----~~v 110 (267)
+..|..|..+.+|++.... .+..+.+|+........-+..+|..+++.+.++.-.+++++.+ ++ .++
T Consensus 23 ~~~lg~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv 98 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKK----NGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLV 98 (286)
T ss_pred eeeeccCCCcEEEEEEECC----CCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEE
Confidence 4567788888999997543 3578889986542211111246888888887665555566543 12 188
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|.++.. .. ...+.... . . ....+..+.. .+...+..+-
T Consensus 99 ~e~~~~~~L~~-------~l-------~~~~~~~~---~-~-~~~~~~~~~~-----------------~i~~~l~~lH- 141 (286)
T cd06638 99 LELCNGGSVTD-------LV-------KGFLKRGE---R-M-EEPIIAYILH-----------------EALMGLQHLH- 141 (286)
T ss_pred EeecCCCCHHH-------HH-------HHhhccCc---c-c-cHHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99999876642 11 11111100 0 0 0111111211 1122223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.++||+.+.
T Consensus 142 -------~~~i~H~dlkp~nili~~~-~~~kl~dfg~~~ 172 (286)
T cd06638 142 -------VNKTIHRDVKGNNILLTTE-GGVKLVDFGVSA 172 (286)
T ss_pred -------hCCccccCCCHHhEEECCC-CCEEEccCCcee
Confidence 1248999999999999874 679999999774
No 79
>PRK09902 hypothetical protein; Provisional
Probab=98.18 E-value=2.9e-05 Score=64.45 Aligned_cols=50 Identities=8% Similarity=-0.049 Sum_probs=38.6
Q ss_pred CcEEEEccCCCCCCeeeeCCCC-CEEEEeecccCcchHhHHHHhhhhhhee
Q 024452 197 QEIGFCHNDLQYGNIMIDEETS-SITIIVSFTFLQNMLNFKRACTKILLIL 246 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~-~v~lIDwE~a~~~~~~fD~A~~~~~~~~ 246 (267)
+..+++|+|+.+.||+++.+++ .+.+||||-+.......-.+.-|+.-+.
T Consensus 145 H~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~l~~~~~~~~Dl~~l~ 195 (216)
T PRK09902 145 HSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLE 195 (216)
T ss_pred HHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchhhhhhhhhHhHHHHHH
Confidence 4556999999999999985432 3999999999887766666666766555
No 80
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.17 E-value=1.1e-05 Score=72.74 Aligned_cols=137 Identities=16% Similarity=0.141 Sum_probs=80.3
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v 110 (267)
.+..|..|....||++.... .+..+.+|+..... .......+|+.+++.+....+. +++..+. ++ +|
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv-~~~~~~~~~~~~~lv 79 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVD----TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVV-KLYYSFQDKDNLYFV 79 (376)
T ss_pred EEEEEEeCCCeEEEEEEECC----CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcc-eEEEEEEcCCEEEEE
Confidence 46778888889999998543 35789999875321 0011123677787777554443 4454443 22 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. . +.+ .. ..+ ......|..+ +...++.+-+
T Consensus 80 ~E~~~~g~L~~-------~-------i~~---~~----~~~--~~~~~~~~~q-----------------i~~al~~lH~ 119 (376)
T cd05598 80 MDYIPGGDMMS-------L-------LIR---LG----IFE--EDLARFYIAE-----------------LTCAIESVHK 119 (376)
T ss_pred EeCCCCCcHHH-------H-------HHh---cC----CCC--HHHHHHHHHH-----------------HHHHHHHHHH
Confidence 99999865532 1 111 00 000 0112222221 2222233322
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 120 --------~~ivHrDlkp~Nill~~~-~~ikL~DFG~a~ 149 (376)
T cd05598 120 --------MGFIHRDIKPDNILIDRD-GHIKLTDFGLCT 149 (376)
T ss_pred --------CCeEeCCCCHHHEEECCC-CCEEEEeCCCCc
Confidence 348999999999999874 689999999874
No 81
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.16 E-value=1.5e-05 Score=74.65 Aligned_cols=165 Identities=16% Similarity=0.241 Sum_probs=97.3
Q ss_pred cCCCChHHHHHHHHHhCCC-CCCCCCCCCcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccccc-------
Q 024452 9 LPSSSPEELKKVLQSVASD-WGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFF------- 80 (267)
Q Consensus 9 ~~~~~~~~~~~l~~~~~p~-w~~~~~~~~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~------- 80 (267)
.|.+..+++.+++++-++. ..++. +.++=+||...--..||+..+.+ +.+++||+..++.+..+
T Consensus 137 ~Pp~~~ee~~~i~e~ElG~~ie~if---~~f~~~piaaASlaQVhrA~L~~-----G~~VaVKVQ~P~l~~~~~~Dl~~~ 208 (538)
T KOG1235|consen 137 APPFPWEEAFKIFEEELGAPIEDIF---SEFDEEPIAAASLAQVHRARLKN-----GEDVAVKVQHPGLEKLIMLDLRNL 208 (538)
T ss_pred CCCCCHHHHHHHHHHHhCCCHHHHH---HhcCcchhhhcchhheEEEEecC-----CCEEEEEecCcChHHHHHHHHHHH
Confidence 5778889999999888754 11111 22344566554457899998763 68999999988743221
Q ss_pred -------------------------------ChHHHHHHH----HHHHhCC-----CCceEEEEECCe--eEEEeecCCC
Q 024452 81 -------------------------------NRDDEIRTF----ECMSSQG-----QGPRLLGRFGDG--RVEEFIHART 118 (267)
Q Consensus 81 -------------------------------dr~~E~~~~----~~l~~~g-----l~P~v~~~~~~~--~v~e~i~G~~ 118 (267)
|--.|++.. +.+++.. ..|+||+....- ++|||++|..
T Consensus 209 ~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~ 288 (538)
T KOG1235|consen 209 RLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIK 288 (538)
T ss_pred HHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCcc
Confidence 111233333 2333333 269999876433 7899999988
Q ss_pred CCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCc
Q 024452 119 LSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQE 198 (267)
Q Consensus 119 l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~ 198 (267)
++.-+ ..+ +... .+. + ......+.+.+++ ..
T Consensus 289 i~Dl~-----~i~----------~~gi----~~~---------~-----------------i~~~l~~~~~~qI----f~ 319 (538)
T KOG1235|consen 289 INDLD-----AID----------KRGI----SPH---------D-----------------ILNKLVEAYLEQI----FK 319 (538)
T ss_pred CCCHH-----HHH----------HcCC----CHH---------H-----------------HHHHHHHHHHHHH----Hh
Confidence 87520 000 0000 000 0 0011111222221 23
Q ss_pred EEEEccCCCCCCeeeeCC---CCCEEEEeecccCc
Q 024452 199 IGFCHNDLQYGNIMIDEE---TSSITIIVSFTFLQ 230 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~---~~~v~lIDwE~a~~ 230 (267)
.+|.|+|+|||||+++++ +..+++.|+...+.
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~ 354 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAV 354 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEccccccc
Confidence 449999999999999942 45799999988775
No 82
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.12 E-value=1.4e-05 Score=70.58 Aligned_cols=134 Identities=15% Similarity=0.094 Sum_probs=77.6
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---cccc-ChHHHHHHHHHHHhCCCCceEEEEECC-e---eEEEee
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFF-NRDDEIRTFECMSSQGQGPRLLGRFGD-G---RVEEFI 114 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v~e~i 114 (267)
|..|....||++.... .+..+.+|+..... .... ....|..++..+..+...++++..+.+ + +|+||+
T Consensus 3 lG~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~ 78 (321)
T cd05591 3 LGKGSFGKVMLAELKG----TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYV 78 (321)
T ss_pred cccCCCeEEEEEEECC----CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCC
Confidence 5667778999997543 35788999875431 1111 113566666666566555666666542 2 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. .+ .+-.. .. ......+.. .+...+..|-
T Consensus 79 ~~~~L~~----------~l----~~~~~--------~~-~~~~~~~~~-----------------qi~~aL~~LH----- 113 (321)
T cd05591 79 NGGDLMF----------QI----QRSRK--------FD-EPRSRFYAA-----------------EVTLALMFLH----- 113 (321)
T ss_pred CCCcHHH----------HH----HHcCC--------CC-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 9865421 01 00000 00 011111211 1222333332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 114 ---~~~ivHrDikp~Nill~~~-~~~kL~Dfg~~~ 144 (321)
T cd05591 114 ---RHGVIYRDLKLDNILLDAE-GHCKLADFGMCK 144 (321)
T ss_pred ---HCCeeccCCCHHHeEECCC-CCEEEeecccce
Confidence 2248999999999999874 689999999764
No 83
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.12 E-value=1.6e-05 Score=70.44 Aligned_cols=137 Identities=16% Similarity=0.146 Sum_probs=79.2
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc----cccChHHHHHHHHHHHhCCCCceEEEEECC--e--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE----VFFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~----~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v 110 (267)
-+..|..|....||++.... .+..+++|+...... .......|..++..+....+ ++++..+.+ . +|
T Consensus 5 ~~~~ig~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-v~~~~~~~~~~~~~lv 79 (333)
T cd05600 5 ILTQVGQGGYGQVFLAKKKD----TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWL-VKLLYAFQDDEYLYLA 79 (333)
T ss_pred EEEEEeecCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCC-ccEEEEEEcCCEEEEE
Confidence 46677888889999998643 357888998754211 11112357777776653333 445544432 2 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|.++.. .. . ... . .. ......+..+ +...+..|-
T Consensus 80 ~e~~~g~~L~~-------~l-------~---~~~---~--l~-~~~~~~~~~q-----------------i~~~l~~lH- 118 (333)
T cd05600 80 MEYVPGGDFRT-------LL-------N---NLG---V--LS-EDHARFYMAE-----------------MFEAVDALH- 118 (333)
T ss_pred EeCCCCCCHHH-------HH-------H---HcC---C--CC-HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 99999876532 11 0 000 0 00 1112222221 122223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||..|.
T Consensus 119 -------~~~ivH~dlkp~Nil~~~~-~~~kL~Dfg~a~ 149 (333)
T cd05600 119 -------ELGYIHRDLKPENFLIDAS-GHIKLTDFGLSK 149 (333)
T ss_pred -------HCCccccCCCHHHEEECCC-CCEEEEeCcCCc
Confidence 1248999999999999874 689999999775
No 84
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.10 E-value=1.5e-05 Score=71.50 Aligned_cols=137 Identities=11% Similarity=0.099 Sum_probs=78.0
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccC-hHHHHHHHHHHHhCCCCceEEEEECC----eeE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFN-RDDEIRTFECMSSQGQGPRLLGRFGD----GRV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~----~~v 110 (267)
.+..|..|....||++.... .+..+.+|+..... ..... ...|..++..+.... .++++..+.+ .+|
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 5 SLKVIGRGAFGEVRLVQKKD----TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW-VVKMFYSFQDKRNLYLI 79 (360)
T ss_pred EEEEEeeCCCEEEEEEEECC----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCC-EeeEEEEEEcCCEEEEE
Confidence 46777888889999998643 35788899864321 11111 135666666553322 3445554432 288
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. .+.+ .. . . .......|..++ ...++.+-
T Consensus 80 ~E~~~gg~L~~--------------~l~~---~~----~-l-~~~~~~~~~~qi-----------------~~~L~~lH- 118 (360)
T cd05627 80 MEFLPGGDMMT--------------LLMK---KD----T-L-SEEATQFYIAET-----------------VLAIDAIH- 118 (360)
T ss_pred EeCCCCccHHH--------------HHHh---cC----C-C-CHHHHHHHHHHH-----------------HHHHHHHH-
Confidence 99999865532 1110 00 0 0 011122232221 12223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||+.|.
T Consensus 119 -------~~givHrDLkp~NIli~~~-~~vkL~DfG~~~ 149 (360)
T cd05627 119 -------QLGFIHRDIKPDNLLLDAK-GHVKLSDFGLCT 149 (360)
T ss_pred -------HCCeEccCCCHHHEEECCC-CCEEEeeccCCc
Confidence 2358999999999999874 689999999875
No 85
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.08 E-value=2.5e-05 Score=65.94 Aligned_cols=142 Identities=18% Similarity=0.135 Sum_probs=79.2
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEECC-e---eEEEee
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RVEEFI 114 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v~e~i 114 (267)
..+..|..+.+|++......+.....+++|....... .......|+..++.+...++ .+++....+ + ++++|+
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~i~e~~ 83 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNI-VKLLGVCTEEEPLMIVMEYM 83 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCch-heEEEEEcCCCeeEEEEecc
Confidence 4567777889999986532111236788888765432 11122468888888844344 445544432 2 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++... ... ... .. . ....+..+.. .+...+..+.
T Consensus 84 ~~~~l~~~-------~~~----------~~~--~~-~-~~~~~~~~~~-----------------ql~~~l~~lh----- 120 (258)
T smart00219 84 EGGDLLDY-------LRK----------NRP--KE-L-SLSDLLSFAL-----------------QIARGMEYLE----- 120 (258)
T ss_pred CCCCHHHH-------HHh----------hhh--cc-C-CHHHHHHHHH-----------------HHHHHHHHHh-----
Confidence 98655321 100 000 00 0 0011111211 1122222221
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|+||+++++ +.+.++||+.+..
T Consensus 121 ---~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~ 152 (258)
T smart00219 121 ---SKNFIHRDLAARNCLVGEN-LVVKISDFGLSRD 152 (258)
T ss_pred ---cCCeeecccccceEEEccC-CeEEEcccCCcee
Confidence 2258999999999999874 6799999998853
No 86
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.08 E-value=3.1e-05 Score=65.93 Aligned_cols=140 Identities=16% Similarity=0.135 Sum_probs=78.2
Q ss_pred cEE-EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC-C---eeEE
Q 024452 37 ALQ-VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG-D---GRVE 111 (267)
Q Consensus 37 ~~~-i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~---~~v~ 111 (267)
.++ ...+..|....+|++.... +..+++|.........-+-.+|+.+++.+...++. +++..+. + .+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNN-----TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLI-QLYAVCTLEEPIYIVT 80 (261)
T ss_pred heeeEEEecccCCccEEEEEecC-----CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCcc-ceeEEEecCCCeeeee
Confidence 344 4666777788999987432 36788998754432111123677777777644443 3444433 2 2789
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|.++.. ... . .. .. ... ...+..+.. .+...+..+.
T Consensus 81 e~~~~~~L~~-------~~~-------~---~~--~~-~~~-~~~~~~~~~-----------------~i~~~l~~lH-- 120 (261)
T cd05068 81 ELMKYGSLLE-------YLQ-------G---GA--GR-ALK-LPQLIDMAA-----------------QVASGMAYLE-- 120 (261)
T ss_pred ecccCCcHHH-------HHh-------c---cC--CC-CCC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9988765532 110 0 00 00 011 111222211 1122222332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.|+||+.+.
T Consensus 121 ------~~~i~H~dl~p~Nil~~~~-~~~~l~dfg~~~ 151 (261)
T cd05068 121 ------AQNYIHRDLAARNVLVGEN-NICKVADFGLAR 151 (261)
T ss_pred ------hCCeeeccCCcceEEEcCC-CCEEECCcceEE
Confidence 2248999999999999974 679999998764
No 87
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.08 E-value=1.8e-05 Score=71.18 Aligned_cols=137 Identities=12% Similarity=0.127 Sum_probs=78.2
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---cccc-ChHHHHHHHHHHHhCCCCceEEEEECC--e--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFF-NRDDEIRTFECMSSQGQGPRLLGRFGD--G--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v 110 (267)
.+..|..|..+.||++.... .+..+.+|+..... .... ....|..++..+.... .++.+..+.+ . +|
T Consensus 5 ~~~~LG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~-iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 5 SLKVIGRGAFGEVRLVQKKD----TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW-VVKMFYSFQDKLNLYLI 79 (363)
T ss_pred EeEEEEeCCCEEEEEEEECC----CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCC-cceEEEEEecCCeEEEE
Confidence 45677888889999997543 35789999875321 0111 1135666666654322 3445554432 2 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. . +. ... . .. ......+..+ +...++.+-
T Consensus 80 ~E~~~gg~L~~----------~----l~---~~~----~-l~-~~~~~~~~~q-----------------i~~aL~~lH- 118 (363)
T cd05628 80 MEFLPGGDMMT----------L----LM---KKD----T-LT-EEETQFYIAE-----------------TVLAIDSIH- 118 (363)
T ss_pred EcCCCCCcHHH----------H----HH---hcC----C-CC-HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 99999865431 0 11 000 0 00 1112222221 112223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 119 -------~~givHrDlKp~NILi~~~-~~vkL~DFGla~ 149 (363)
T cd05628 119 -------QLGFIHRDIKPDNLLLDSK-GHVKLSDFGLCT 149 (363)
T ss_pred -------hCCeEecCCCHHHeEECCC-CCEEEeeccCcc
Confidence 2358999999999999874 689999999875
No 88
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.07 E-value=2e-05 Score=69.79 Aligned_cols=137 Identities=16% Similarity=0.117 Sum_probs=79.2
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~ 111 (267)
...|..|..+.||++.... .+..|.+|+..... ........|..++..+......+.++..+. +. +|+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKG----TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred EEEEEecCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4567888889999998543 35789999875421 111111346666666655555566665543 22 789
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||++|..+.. .+.+... .. ......+.. .+...+..+-
T Consensus 81 Ey~~~g~L~~--------------~i~~~~~--------l~-~~~~~~i~~-----------------qi~~al~~lH-- 118 (323)
T cd05615 81 EYVNGGDLMY--------------HIQQVGK--------FK-EPQAVFYAA-----------------EISVGLFFLH-- 118 (323)
T ss_pred cCCCCCcHHH--------------HHHHcCC--------CC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9999865521 0111000 00 011111211 1222233332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++.+ +.+.|+||..|.
T Consensus 119 ------~~~ivHrDikp~Nill~~~-~~ikL~Dfg~~~ 149 (323)
T cd05615 119 ------RRGIIYRDLKLDNVMLDSE-GHIKIADFGMCK 149 (323)
T ss_pred ------HCCeeccCCCHHHeEECCC-CCEEEecccccc
Confidence 2358999999999999974 689999998764
No 89
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.07 E-value=3.6e-05 Score=66.71 Aligned_cols=137 Identities=18% Similarity=0.170 Sum_probs=76.9
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEEEee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RVEEFI 114 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~e~i 114 (267)
+..+..|....+|++.... .+..+++|........ ..+..+|+.+++.+...+ .++++..+. ++ ++++|+
T Consensus 17 ~~~lg~g~~g~vy~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKE----TGALAAAKVIETKSEEELEDYMVEIEILATCNHPY-IVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hheecCCCCeEEEEEEECC----CCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCc-EeeeEEEEEeCCeEEEEEecC
Confidence 4567778888999998643 3578888887544321 111235666666665333 344444432 22 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|..+.. +.. +...+ .. ......+..+ +...+..+.
T Consensus 92 ~~~~l~~-------~~~----------~~~~~----l~-~~~~~~~~~q-----------------l~~~l~~lH----- 127 (292)
T cd06644 92 PGGAVDA-------IML----------ELDRG----LT-EPQIQVICRQ-----------------MLEALQYLH----- 127 (292)
T ss_pred CCCcHHH-------HHH----------hhcCC----CC-HHHHHHHHHH-----------------HHHHHHHHh-----
Confidence 9876531 000 00000 00 0111112211 112222222
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++. ++.+.|+||..+.
T Consensus 128 ---~~~i~H~dlkp~Nili~~-~~~~kl~dfg~~~ 158 (292)
T cd06644 128 ---SMKIIHRDLKAGNVLLTL-DGDIKLADFGVSA 158 (292)
T ss_pred ---cCCeeecCCCcceEEEcC-CCCEEEccCccce
Confidence 235899999999999986 4689999998764
No 90
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.07 E-value=1.2e-05 Score=71.14 Aligned_cols=135 Identities=16% Similarity=0.135 Sum_probs=75.7
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEECC--e--eEEEe
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RVEEF 113 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e~ 113 (267)
.|..|....||++.... ++..+.+|+..... ........|..++..+..+...++++..+.+ . +|+||
T Consensus 2 ~lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey 77 (320)
T cd05590 2 VLGKGSFGKVMLARLKE----SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEF 77 (320)
T ss_pred eeeeCCCeEEEEEEEcC----CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcC
Confidence 35667788999998543 35788899765321 1111112466666555555445556655432 2 88999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|..+.. .+.+-+. .. ......+.. .+...+..+-
T Consensus 78 ~~~g~L~~--------------~i~~~~~--------l~-~~~~~~~~~-----------------ql~~~L~~lH---- 113 (320)
T cd05590 78 VNGGDLMF--------------HIQKSRR--------FD-EARARFYAA-----------------EITSALMFLH---- 113 (320)
T ss_pred CCCchHHH--------------HHHHcCC--------CC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 99865421 1111000 00 011111111 1222233332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 114 ----~~~ivH~dlkp~NIli~~~-~~~kL~DfG~~~ 144 (320)
T cd05590 114 ----DKGIIYRDLKLDNVLLDHE-GHCKLADFGMCK 144 (320)
T ss_pred ----HCCeEeCCCCHHHeEECCC-CcEEEeeCCCCe
Confidence 2348999999999999874 689999998764
No 91
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.04 E-value=4.5e-05 Score=65.00 Aligned_cols=141 Identities=12% Similarity=0.105 Sum_probs=81.8
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC--C--------ee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG--D--------GR 109 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--------~~ 109 (267)
...+..|....+|++.... .+..+++|+.........+-.+|..+++.+..+.-.+++++.+. . .+
T Consensus 11 ~~~l~~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~l 86 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKK----TGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWL 86 (275)
T ss_pred eeeecCCCCeEEEEEEECC----CCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEE
Confidence 5666777778999998643 35788899876543221122478888888866665566666541 1 27
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
+++|++|.++.. + +.+...... ... ......+.. .+...+..+.
T Consensus 87 v~e~~~~~~L~~-----------~---~~~~~~~~~----~~~-~~~~~~~~~-----------------ql~~al~~lH 130 (275)
T cd06608 87 VMELCGGGSVTD-----------L---VKGLRKKGK----RLK-EEWIAYILR-----------------ETLRGLAYLH 130 (275)
T ss_pred EEEcCCCCcHHH-----------H---HHHHhhcCC----CCC-HHHHHHHHH-----------------HHHHHHHHHh
Confidence 899998865531 1 111110000 000 011111111 1222223332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 131 --------~~~i~H~~l~p~ni~~~~~-~~~~l~d~~~~~ 161 (275)
T cd06608 131 --------ENKVIHRDIKGQNILLTKN-AEVKLVDFGVSA 161 (275)
T ss_pred --------cCCcccCCCCHHHEEEccC-CeEEECCCccce
Confidence 2358999999999999874 679999998764
No 92
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.04 E-value=2.4e-05 Score=66.11 Aligned_cols=135 Identities=19% Similarity=0.110 Sum_probs=76.2
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-ccc-ChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeec
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VFF-NRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIH 115 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~ 115 (267)
.|..|....+|+++... ++..+.+|....... ... .-.+|.++++.+..-++ +++++.+.+ .+++||++
T Consensus 2 ~lg~g~~g~vy~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~ 76 (252)
T cd05084 2 RIGRGNFGEVFSGRLRA----DNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-VRLIGVCTQKQPIYIVMELVQ 76 (252)
T ss_pred ccCcccCccEEEEEEec----CCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCc-ceEEEEEcCCCCeEEEEeecc
Confidence 35666678999987643 357888997654321 111 12467777777754343 445555432 28899998
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++.. . + +.... . .. ......+.. .+.+.+..+.
T Consensus 77 ~~~L~~-------~-------~---~~~~~---~-~~-~~~~~~~~~-----------------qi~~~L~~lH------ 111 (252)
T cd05084 77 GGDFLT-------F-------L---RTEGP---R-LK-VKELIQMVE-----------------NAAAGMEYLE------ 111 (252)
T ss_pred CCcHHH-------H-------H---HhCCC---C-CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865531 0 1 11000 0 01 111111221 1222223332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.++||+.+.
T Consensus 112 --~~~i~H~dl~p~nil~~~~-~~~kl~dfg~~~ 142 (252)
T cd05084 112 --SKHCIHRDLAARNCLVTEK-NVLKISDFGMSR 142 (252)
T ss_pred --hCCccccccchheEEEcCC-CcEEECccccCc
Confidence 2248999999999999874 679999998765
No 93
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.04 E-value=4.4e-05 Score=67.60 Aligned_cols=140 Identities=11% Similarity=0.116 Sum_probs=79.9
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----cccc-ChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFF-NRDDEIRTFECMSSQGQGPRLLGRFG-DG---RV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v 110 (267)
+..|..|..+.||++..... ...+..+.+|+..... .... ....|..+++.+..+....+++..+. ++ ++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTG-HDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLI 83 (332)
T ss_pred EEEEeecCCEEEEEEEEccc-CCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEE
Confidence 56677788889999874321 1135778889875321 0111 11367778877766544455555543 22 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|++|..+.. .+ .+ .. . . ....+..+..+ +...+..|-
T Consensus 84 ~e~~~~g~L~~----------~l----~~---~~---~--~-~~~~~~~~~~q-----------------i~~~l~~lH- 122 (332)
T cd05614 84 LDYVSGGEMFT----------HL----YQ---RD---N--F-SEDEVRFYSGE-----------------IILALEHLH- 122 (332)
T ss_pred EeCCCCCcHHH----------HH----HH---cC---C--C-CHHHHHHHHHH-----------------HHHHHHHHH-
Confidence 99998865421 01 00 00 0 0 01122222221 222233332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 123 -------~~~ivHrDlkp~Nili~~~-~~~kl~DfG~~~ 153 (332)
T cd05614 123 -------KLGIVYRDIKLENILLDSE-GHVVLTDFGLSK 153 (332)
T ss_pred -------HCCcEecCCCHHHeEECCC-CCEEEeeCcCCc
Confidence 2348999999999999874 689999998764
No 94
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.04 E-value=2.2e-05 Score=69.45 Aligned_cols=138 Identities=16% Similarity=0.134 Sum_probs=76.7
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---cccC-hHHHHHHHHHHHhCCCCceEEEEECC--e--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---VFFN-RDDEIRTFECMSSQGQGPRLLGRFGD--G--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v 110 (267)
-...|..|....||++.... .+..+++|+...... .... ...|..+++.+. +...++++..+.+ . +|
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 5 VKSLVGRGHFGEVQVVREKA----TGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN-SPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred EEEEEEeccCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCeEEEE
Confidence 35667788888999997543 357888998754211 0111 134555555443 2333455554432 2 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|.++.. .+.+. ..+. + ...+..+..+ +...++.+-
T Consensus 80 ~e~~~~~~L~~--------------~l~~~---~~~l---~--~~~~~~~~~q-----------------i~~aL~~lH- 119 (330)
T cd05601 80 MEYQPGGDLLS--------------LLNRY---EDQF---D--EDMAQFYLAE-----------------LVLAIHSVH- 119 (330)
T ss_pred ECCCCCCCHHH--------------HHHHh---cCCC---C--HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 99998865531 11110 0000 0 1112222211 222223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||..|.
T Consensus 120 -------~~~i~H~Dlkp~NIll~~~-~~~kL~Dfg~a~ 150 (330)
T cd05601 120 -------QMGYVHRDIKPENVLIDRT-GHIKLADFGSAA 150 (330)
T ss_pred -------HCCeEcccCchHheEECCC-CCEEeccCCCCe
Confidence 2348999999999999874 789999999774
No 95
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=98.04 E-value=2e-05 Score=69.74 Aligned_cols=133 Identities=17% Similarity=0.132 Sum_probs=74.3
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---c-cccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEee
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---E-VFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFI 114 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~-~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i 114 (267)
|..|....||++.... .+..+++|+..... . .......|..+++.+..-.+ +++++.+. +. +|+||+
T Consensus 3 lG~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-~~~~~~~~~~~~~~lv~E~~ 77 (323)
T cd05595 3 LGKGTFGKVILVREKA----TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL-TALKYAFQTHDRLCFVMEYA 77 (323)
T ss_pred eeeCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-cceeeEEecCCEEEEEEeCC
Confidence 5667778999997543 35788999875421 1 11111256666666644333 34444433 22 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|..+.. .+. ... + .. ......+.. .+...+..|-
T Consensus 78 ~~~~L~~--------------~l~---~~~-~----~~-~~~~~~~~~-----------------qi~~aL~~LH----- 112 (323)
T cd05595 78 NGGELFF--------------HLS---RER-V----FT-EERARFYGA-----------------EIVSALEYLH----- 112 (323)
T ss_pred CCCcHHH--------------HHH---HcC-C----CC-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 9865521 010 000 0 00 111222221 1222333332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++++ +.+.|+||..|.
T Consensus 113 ---~~~ivH~Dlkp~NIll~~~-~~~kL~Dfg~~~ 143 (323)
T cd05595 113 ---SRDVVYRDIKLENLMLDKD-GHIKITDFGLCK 143 (323)
T ss_pred ---HCCeEecCCCHHHEEEcCC-CCEEecccHHhc
Confidence 1259999999999999874 689999999764
No 96
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.04 E-value=6.5e-05 Score=65.54 Aligned_cols=137 Identities=12% Similarity=0.082 Sum_probs=77.4
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccCh-HHHHHHHHHHHhCCCCceEEEEECC--e--eEEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNR-DDEIRTFECMSSQGQGPRLLGRFGD--G--RVEE 112 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr-~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e 112 (267)
..+..+..|..+.+|++.... .+..+++|..........++ .+|..+++.+...++. +++....+ . ++++
T Consensus 22 ~~~~~lg~g~~g~vy~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e 96 (296)
T cd06655 22 TRYEKIGQGASGTVFTAIDVA----TGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIV-NFLDSFLVGDELFVVME 96 (296)
T ss_pred EEEEEEecCCCeEEEEEEEcC----CCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCcee-eeeeeEecCceEEEEEE
Confidence 456677888888999986432 35788888764332111111 3577777776544443 34544332 2 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|..+.. .. . .... . ......... .+...+..+-+
T Consensus 97 ~~~~~~L~~-------~~-------~---~~~l------~-~~~~~~i~~-----------------~l~~al~~LH~-- 133 (296)
T cd06655 97 YLAGGSLTD-------VV-------T---ETCM------D-EAQIAAVCR-----------------ECLQALEFLHA-- 133 (296)
T ss_pred ecCCCcHHH-------HH-------H---hcCC------C-HHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 998866532 01 0 0000 0 011111111 12222233321
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++. ++.+.|+||+.+.
T Consensus 134 ------~~i~H~dL~p~Nili~~-~~~~kl~dfg~~~ 163 (296)
T cd06655 134 ------NQVIHRDIKSDNVLLGM-DGSVKLTDFGFCA 163 (296)
T ss_pred ------CCcccCCCCHHHEEECC-CCCEEEccCccch
Confidence 24789999999999987 4689999998764
No 97
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.03 E-value=3.6e-05 Score=65.54 Aligned_cols=137 Identities=16% Similarity=0.185 Sum_probs=77.9
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC---eeEEEeecC
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD---GRVEEFIHA 116 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~---~~v~e~i~G 116 (267)
...|..|....+|++.... ...+++|...........-.+|+.+++.+...++.| +++.... .++++|++|
T Consensus 11 ~~~ig~g~~~~v~~~~~~~-----~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~-~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNG-----TTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVP-LYAVVSEEPIYIVTEFMGK 84 (260)
T ss_pred eeeecCcCCCeEEEEEEcC-----CceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeee-EEEEEcCCCcEEEEEcCCC
Confidence 3456777778999997532 356888876543221111146888888887656555 3444332 288999887
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
.++.. .+. .... . ... ......+.. .+...+..+-
T Consensus 85 ~~L~~--------------~~~---~~~~--~-~~~-~~~~~~~~~-----------------~l~~al~~lH------- 119 (260)
T cd05069 85 GSLLD--------------FLK---EGDG--K-YLK-LPQLVDMAA-----------------QIADGMAYIE------- 119 (260)
T ss_pred CCHHH--------------HHh---hCCC--C-CCC-HHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 65432 111 1000 0 011 111111211 1222333332
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.|+||+.+.
T Consensus 120 -~~~i~H~dl~~~Nill~~~-~~~~l~dfg~~~ 150 (260)
T cd05069 120 -RMNYIHRDLRAANILVGDN-LVCKIADFGLAR 150 (260)
T ss_pred -hCCEeecccCcceEEEcCC-CeEEECCCccce
Confidence 2248999999999999874 678999999875
No 98
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.03 E-value=1.3e-05 Score=71.87 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=79.5
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEECCe----eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v 110 (267)
.+..|..|....||++.... .+..+++|+..... .......+|..+++.+... ..++++..+.++ +|
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~-~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 5 SIKVIGRGAFGEVRLVQKKD----TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNP-WVVKLYYSFQDENYLYLI 79 (364)
T ss_pred EEEEEEecCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC-CCcceEEEEEcCCeEEEE
Confidence 45677888889999998543 35788999875321 1111113677787777532 334455554322 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. .+ +... . .. ......+..+ +...++.+-
T Consensus 80 ~E~~~~g~L~~--------------~l---~~~~----~-l~-~~~~~~~~~q-----------------i~~aL~~lH- 118 (364)
T cd05599 80 MEYLPGGDMMT--------------LL---MKKD----T-FT-EEETRFYIAE-----------------TILAIDSIH- 118 (364)
T ss_pred ECCCCCcHHHH--------------HH---HHcC----C-CC-HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 99998765431 11 1100 0 00 1112222221 222233332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 119 -------~~~ivH~Dlkp~NIl~~~~-~~~kl~Dfg~~~ 149 (364)
T cd05599 119 -------KLGYIHRDIKPDNLLLDAK-GHIKLSDFGLCT 149 (364)
T ss_pred -------HCCeEeccCCHHHeEECCC-CCEEEeecccce
Confidence 1348999999999999874 689999999875
No 99
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=98.02 E-value=3.1e-05 Score=68.67 Aligned_cols=134 Identities=17% Similarity=0.192 Sum_probs=78.2
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccC-hHHHHHHHHHHHhCCCCceEEEEECC--e--eEEEee
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFN-RDDEIRTFECMSSQGQGPRLLGRFGD--G--RVEEFI 114 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e~i 114 (267)
|..|....||++.... .+..+.+|+..... ....+ ...|..+++.+..+...++++..+.+ . +|+||+
T Consensus 3 lG~G~~g~V~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~ 78 (329)
T cd05588 3 IGRGSYAKVLLVELKK----TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFV 78 (329)
T ss_pred EeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCC
Confidence 5667778999998643 35788899875421 11111 23677777777666555666666532 2 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|..+.. .+.+-+. . + ......+.. .+...+..+.
T Consensus 79 ~~g~L~~--------------~~~~~~~--l-----~--~~~~~~~~~-----------------qi~~~l~~lH----- 113 (329)
T cd05588 79 SGGDLMF--------------HMQRQRK--L-----P--EEHARFYSA-----------------EISLALNFLH----- 113 (329)
T ss_pred CCCCHHH--------------HHHHcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 9865421 0100000 0 0 011111221 1222333332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 114 ---~~~ivH~dlkp~Nili~~~-~~~kL~Dfg~~~ 144 (329)
T cd05588 114 ---ERGIIYRDLKLDNVLLDAE-GHIKLTDYGMCK 144 (329)
T ss_pred ---HCCeEecCCCHHHeEECCC-CCEEECcCcccc
Confidence 2359999999999999874 689999998764
No 100
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.02 E-value=3.1e-05 Score=68.26 Aligned_cols=137 Identities=14% Similarity=0.140 Sum_probs=75.8
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc---ccChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEEEee
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV---FFNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RVEEFI 114 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~---~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~e~i 114 (267)
.|..|....||++..... ...+..+.+|+....... ......|.++++.+..-++. +++..+. ++ +|+||+
T Consensus 3 ~lg~G~~g~Vy~~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 3 VLGQGSFGKVFLVRKITG-PDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIV-KLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred eeeeCCCEEEEEEEEecc-CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcc-cEEEEEEcCCEEEEEEcCC
Confidence 466677789999864211 113578889987542211 11113577777777544444 3444443 22 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|..+.. .+ +.. . .-....+..|..+ +...+..|-+
T Consensus 81 ~~~~L~~--------------~l---~~~-~-----~l~~~~~~~~~~q-----------------i~~~l~~lH~---- 116 (318)
T cd05582 81 RGGDLFT--------------RL---SKE-V-----MFTEEDVKFYLAE-----------------LALALDHLHS---- 116 (318)
T ss_pred CCCcHHH--------------HH---HHc-C-----CCCHHHHHHHHHH-----------------HHHHHHHHHH----
Confidence 8754421 11 110 0 0011122223221 2222333321
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 117 ----~~i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~ 146 (318)
T cd05582 117 ----LGIIYRDLKPENILLDEE-GHIKLTDFGLSK 146 (318)
T ss_pred ----CCEecCCCCHHHeEECCC-CcEEEeeccCCc
Confidence 348999999999999874 689999998764
No 101
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.02 E-value=1.9e-05 Score=69.70 Aligned_cols=134 Identities=18% Similarity=0.104 Sum_probs=75.5
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc----cccChHHHHHHHHHHHhCCCCceEEEEECC--e--eEEEee
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE----VFFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RVEEFI 114 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~----~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e~i 114 (267)
|..|....||++.... .+..+.+|+...... .......|..++..+..+...++++..+.+ . +|+||+
T Consensus 3 lg~G~~g~V~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 78 (316)
T cd05620 3 LGKGSFGKVLLAELKG----KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFL 78 (316)
T ss_pred eeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCC
Confidence 5667778999998643 357888998754210 011112455555544445455666665532 2 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. . +. .. .. .. ......+.. .+...++.+-+
T Consensus 79 ~~g~L~~----------~----i~---~~----~~-~~-~~~~~~~~~-----------------qi~~~l~~lH~---- 114 (316)
T cd05620 79 NGGDLMF----------H----IQ---DK----GR-FD-LYRATFYAA-----------------EIVCGLQFLHS---- 114 (316)
T ss_pred CCCcHHH----------H----HH---Hc----CC-CC-HHHHHHHHH-----------------HHHHHHHHHHH----
Confidence 8865421 0 10 00 00 01 011111211 12223333322
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 115 ----~~ivHrDlkp~Nil~~~~-~~~kl~Dfg~~~ 144 (316)
T cd05620 115 ----KGIIYRDLKLDNVMLDRD-GHIKIADFGMCK 144 (316)
T ss_pred ----CCeEecCCCHHHeEECCC-CCEEeCccCCCe
Confidence 359999999999999874 689999998764
No 102
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=98.00 E-value=2.9e-05 Score=68.88 Aligned_cols=133 Identities=18% Similarity=0.127 Sum_probs=74.7
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEee
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFI 114 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i 114 (267)
|..|....||++.... .+..+++|+..... .......+|..+++.+..-.+ ++++..+. +. +|+||+
T Consensus 3 lG~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~~~~~~~~~~~~~lv~Ey~ 77 (328)
T cd05593 3 LGKGTFGKVILVREKA----SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFL-TSLKYSFQTKDRLCFVMEYV 77 (328)
T ss_pred eeeCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-cceEEEEEcCCEEEEEEeCC
Confidence 5667788999997543 35788999875431 111112356666666644333 33444432 22 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|..+.. .+ +... . .. ......+.. .+...+..|-+
T Consensus 78 ~~g~L~~----------~l-------~~~~----~-l~-~~~~~~~~~-----------------qi~~aL~~LH~---- 113 (328)
T cd05593 78 NGGELFF----------HL-------SRER----V-FS-EDRTRFYGA-----------------EIVSALDYLHS---- 113 (328)
T ss_pred CCCCHHH----------HH-------HhcC----C-CC-HHHHHHHHH-----------------HHHHHHHHHHh----
Confidence 8865521 00 0000 0 00 111222221 12223333321
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 114 ----~~ivHrDikp~NIll~~~-~~~kL~DfG~~~ 143 (328)
T cd05593 114 ----GKIVYRDLKLENLMLDKD-GHIKITDFGLCK 143 (328)
T ss_pred ----CCeEecccCHHHeEECCC-CcEEEecCcCCc
Confidence 248999999999999874 689999999775
No 103
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.99 E-value=1.9e-05 Score=69.66 Aligned_cols=134 Identities=16% Similarity=0.101 Sum_probs=74.7
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---c-ccChHHHHHHHHHHHhCCCCceEEEEECCe----eEEEee
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---V-FFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEEFI 114 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e~i 114 (267)
|..|....||++.... .+..+.+|+...... . ......|..++..+..+...++++..+..+ +|+||+
T Consensus 3 lG~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~ 78 (316)
T cd05592 3 LGKGSFGKVMLAELKG----TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYL 78 (316)
T ss_pred eeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence 5677788999998643 356788897654211 0 001123444444444444445566554322 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. .+..-+. . . ......|..+ +...+..|-+
T Consensus 79 ~gg~L~~--------------~~~~~~~--~------~-~~~~~~~~~q-----------------i~~al~~LH~---- 114 (316)
T cd05592 79 NGGDLMF--------------HIQSSGR--F------D-EARARFYAAE-----------------IICGLQFLHK---- 114 (316)
T ss_pred CCCcHHH--------------HHHHcCC--C------C-HHHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9865531 0111010 0 0 0112222211 2222333322
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++.+ +.+.|+||..|.
T Consensus 115 ----~~ivH~dlkp~Nill~~~-~~~kL~Dfg~a~ 144 (316)
T cd05592 115 ----KGIIYRDLKLDNVLLDKD-GHIKIADFGMCK 144 (316)
T ss_pred ----CCEEeCCCCHHHeEECCC-CCEEEccCcCCe
Confidence 358999999999999874 689999999775
No 104
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.99 E-value=2.6e-05 Score=68.06 Aligned_cols=137 Identities=12% Similarity=0.069 Sum_probs=77.6
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccC-hHHHHHHHHHHHhCCCCceEEEEEC-C---eeEEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFN-RDDEIRTFECMSSQGQGPRLLGRFG-D---GRVEE 112 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~-~---~~v~e 112 (267)
..+..|..|..+.+|++.... .+..+++|........... ...|..+++.+...++.+ +++.+. + .+|++
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~lv~e 96 (297)
T cd06656 22 TRFEKIGQGASGTVYTAIDIA----TGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVN-YLDSYLVGDELWVVME 96 (297)
T ss_pred eeeeeeccCCCeEEEEEEECC----CCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEee-EEEEEecCCEEEEeec
Confidence 456667888889999997432 3578899977543211111 135666666654444433 444332 2 28899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .. . .... . ...+..+.. .+...+..|.+
T Consensus 97 ~~~~~~L~~-------~~-------~---~~~~------~-~~~~~~~~~-----------------~l~~~L~~LH~-- 133 (297)
T cd06656 97 YLAGGSLTD-------VV-------T---ETCM------D-EGQIAAVCR-----------------ECLQALDFLHS-- 133 (297)
T ss_pred ccCCCCHHH-------HH-------H---hCCC------C-HHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 999876532 00 0 0000 0 011111111 12223333322
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+|||++. ++.+.++||+.+.
T Consensus 134 ------~~i~H~dL~p~Nili~~-~~~~~l~Dfg~~~ 163 (297)
T cd06656 134 ------NQVIHRDIKSDNILLGM-DGSVKLTDFGFCA 163 (297)
T ss_pred ------CCcccCCCCHHHEEECC-CCCEEECcCccce
Confidence 24899999999999987 4689999998664
No 105
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=97.99 E-value=3.7e-05 Score=69.45 Aligned_cols=137 Identities=17% Similarity=0.140 Sum_probs=78.9
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccC-hHHHHHHHHHHHhCCCCceEEEEECCe----eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFN-RDDEIRTFECMSSQGQGPRLLGRFGDG----RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~~----~v 110 (267)
.+..|..|....||++.... .+..+.+|+..... ..... ..+|..+++.+... ..+++++.+.+. +|
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 5 TVKVIGKGAFGEVRLVQKKD----TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSP-WVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred EeEEEeecCCEEEEEEEECC----CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCC-CcceEEEEEEcCCeeEEE
Confidence 45677778889999997543 35788898764321 11111 13577777665433 335566555432 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. .+.+... . + ......|..+ +...++.|-
T Consensus 80 ~E~~~gg~L~~--------------~l~~~~~--~-----~--~~~~~~~~~q-----------------l~~aL~~LH- 118 (377)
T cd05629 80 MEFLPGGDLMT--------------MLIKYDT--F-----S--EDVTRFYMAE-----------------CVLAIEAVH- 118 (377)
T ss_pred EeCCCCCcHHH--------------HHHhcCC--C-----C--HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 99998866531 1111000 0 0 1112222221 122223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 119 -------~~givHrDlkp~NIll~~~-~~~kl~DfGla~ 149 (377)
T cd05629 119 -------KLGFIHRDIKPDNILIDRG-GHIKLSDFGLST 149 (377)
T ss_pred -------hCCeeccCCCHHHEEECCC-CCEEEeeccccc
Confidence 2359999999999999874 689999999874
No 106
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.99 E-value=1.8e-05 Score=69.82 Aligned_cols=134 Identities=17% Similarity=0.157 Sum_probs=77.9
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccC-hHHHHHHHHHHHhCCCCceEEEEECCe----eEEEee
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFN-RDDEIRTFECMSSQGQGPRLLGRFGDG----RVEEFI 114 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e~i 114 (267)
|..|.-..||++.... .+..+.+|+..... ....+ ...|..++..+..+...+++++.+.+. +|+||+
T Consensus 3 lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 78 (318)
T cd05570 3 LGKGSFGKVLLAELKG----TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYV 78 (318)
T ss_pred eeeCCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence 5566678999998643 35788899875321 11111 135677777776665566777765422 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. .+.+-+ .. + ......+.. .+...+..|.
T Consensus 79 ~~~~L~~--------------~~~~~~--~l-----~--~~~~~~~~~-----------------qi~~~l~~LH----- 113 (318)
T cd05570 79 NGGDLMF--------------HIQRSG--RF-----D--EPRARFYAA-----------------EIVLGLQFLH----- 113 (318)
T ss_pred CCCCHHH--------------HHHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 8865521 000000 00 0 111111211 1222333332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 114 ---~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~ 144 (318)
T cd05570 114 ---ERGIIYRDLKLDNVLLDSE-GHIKIADFGMCK 144 (318)
T ss_pred ---hCCeEccCCCHHHeEECCC-CcEEecccCCCe
Confidence 2348999999999999874 689999999764
No 107
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.98 E-value=4e-05 Score=67.75 Aligned_cols=138 Identities=14% Similarity=0.123 Sum_probs=76.8
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-----ccccChHHHHHHHHHHHhCCCCceEEEEE-CCe---eEE
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-----EVFFNRDDEIRTFECMSSQGQGPRLLGRF-GDG---RVE 111 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~-~~~---~v~ 111 (267)
..|..|....+|++..... ...+..+.+|+..... ........|..+++.+..-++.+ ++..+ .++ +++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~-~~~~~~~~~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTG-ADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVD-LIYAFQTGGKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEccc-CCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhc-eeeEEecCCeEEEEE
Confidence 4566777889999975321 1135778888864321 11111136788888876545544 33333 222 789
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|..+.. .+. .... .. ......+.. .+...+..|-+
T Consensus 80 e~~~~~~L~~--------------~~~---~~~~----~~--~~~~~~~~~-----------------qi~~~l~~lH~- 118 (323)
T cd05584 80 EYLSGGELFM--------------HLE---REGI----FM--EDTACFYLS-----------------EISLALEHLHQ- 118 (323)
T ss_pred eCCCCchHHH--------------HHH---HcCC----CC--HHHHHHHHH-----------------HHHHHHHHHHH-
Confidence 9998765421 111 1000 00 011111111 12223333322
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++++ +.+.|+||..+.
T Consensus 119 -------~~ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~ 148 (323)
T cd05584 119 -------QGIIYRDLKPENILLDAQ-GHVKLTDFGLCK 148 (323)
T ss_pred -------CCeecCCCCHHHeEECCC-CCEEEeeCcCCe
Confidence 348999999999999874 689999998764
No 108
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.98 E-value=4.7e-05 Score=67.57 Aligned_cols=137 Identities=14% Similarity=0.164 Sum_probs=77.2
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccC-hHHHHHHHHHHHhCCCCceEEEEEC-Ce---eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFN-RDDEIRTFECMSSQGQGPRLLGRFG-DG---RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v 110 (267)
-+..|..|....||++.... .+..+.+|+..... ..... ...|..++..+....+ +.+++.+. ++ +|
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv 79 (331)
T cd05597 5 ILKVIGRGAFGEVAVVKMKN----TGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWI-TNLHYAFQDENNLYLV 79 (331)
T ss_pred EEEEEEecCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-CceEEEEecCCeEEEE
Confidence 35667788889999998643 35789999865311 00000 1256666665543333 44555443 22 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|.++.. .+.+.+. .. + ......|..+ +...++.+-
T Consensus 80 ~e~~~g~~L~~--------------~l~~~~~-~~-----~--~~~~~~~~~q-----------------i~~~l~~lH- 119 (331)
T cd05597 80 MDYYVGGDLLT--------------LLSKFED-RL-----P--EDMARFYLAE-----------------MVLAIDSVH- 119 (331)
T ss_pred EecCCCCcHHH--------------HHHHhcC-CC-----C--HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 99998866532 1111111 00 0 1112222221 222223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
...++|+|++|.|||++.+ +.+.|+||..|
T Consensus 120 -------~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~ 149 (331)
T cd05597 120 -------QLGYVHRDIKPDNVLLDKN-GHIRLADFGSC 149 (331)
T ss_pred -------hCCeEECCCCHHHEEECCC-CCEEEEECCce
Confidence 2348999999999999874 68999999876
No 109
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=97.98 E-value=3.1e-05 Score=69.22 Aligned_cols=138 Identities=16% Similarity=0.193 Sum_probs=85.2
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---cccCh-HHHHHHHHHHHhCCCCceEEEEECC----eeEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---VFFNR-DDEIRTFECMSSQGQGPRLLGRFGD----GRVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~~~dr-~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~ 111 (267)
+..|..|-...||.+...+ ....+.+|+-.+..- .-+.| ..|.+|+..+ ++-+-|.+|+.++. +++|
T Consensus 82 lk~LG~GdiG~VyL~~l~~----t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 82 LKRLGCGDIGTVYLVELRG----TNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHcCCCCceeEEEEEecC----CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEEEE
Confidence 3456788899999998754 246778888655321 11112 3455565444 55678999999863 3899
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||.+|..+..- + |+ +|.. -+-+...+|+.. .+.-.+++|
T Consensus 157 eyCpGGdL~~L--------r---------qk--Qp~~---~fse~~aRFYaA----------------Evl~ALEYL--- 195 (459)
T KOG0610|consen 157 EYCPGGDLHSL--------R---------QK--QPGK---RFSESAARFYAA----------------EVLLALEYL--- 195 (459)
T ss_pred ecCCCccHHHH--------H---------hh--CCCC---ccchhhHHHHHH----------------HHHHHHHHH---
Confidence 99999776531 1 11 1111 111223333321 111223333
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+-.+++-+||+|.|||+.++ |-++|.|||.+-
T Consensus 196 -----HmlGivYRDLKPENILvred-GHIMLsDFDLS~ 227 (459)
T KOG0610|consen 196 -----HMLGIVYRDLKPENILVRED-GHIMLSDFDLSL 227 (459)
T ss_pred -----HhhceeeccCCcceeEEecC-CcEEeeeccccc
Confidence 23569999999999999985 679999999885
No 110
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.97 E-value=8.3e-05 Score=64.81 Aligned_cols=137 Identities=13% Similarity=0.070 Sum_probs=77.1
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccc-cChHHHHHHHHHHHhCCCCceEEEEEC--C--eeEEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVF-FNRDDEIRTFECMSSQGQGPRLLGRFG--D--GRVEE 112 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~e 112 (267)
..+..+..|..+.+|++.... .+..+.+|......... ....+|+.+++.+...++.+ +++.+. . .+|++
T Consensus 23 ~~~~~lg~g~~~~v~~~~~~~----~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~-~~~~~~~~~~~~lv~e 97 (296)
T cd06654 23 TRFEKIGQGASGTVYTAMDVA----TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN-YLDSYLVGDELWVVME 97 (296)
T ss_pred eeEEEecCCCCeEEEEEEECC----CCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEee-EEEEEEeCCEEEEeec
Confidence 345667888889999997432 35778888764332111 11136777777665444433 333332 2 28899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .. +... .. ...+..+.. .+...+..+.
T Consensus 98 ~~~~~~L~~-------~~----------~~~~------~~-~~~~~~i~~-----------------ql~~aL~~LH--- 133 (296)
T cd06654 98 YLAGGSLTD-------VV----------TETC------MD-EGQIAAVCR-----------------ECLQALEFLH--- 133 (296)
T ss_pred ccCCCCHHH-------HH----------HhcC------CC-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 999866532 11 0000 01 011111111 1222233332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||+.+.
T Consensus 134 -----~~gi~H~dLkp~Nill~~~-~~~kl~dfg~~~ 164 (296)
T cd06654 134 -----SNQVIHRDIKSDNILLGMD-GSVKLTDFGFCA 164 (296)
T ss_pred -----HCCcccCCCCHHHEEEcCC-CCEEECccccch
Confidence 1248999999999999874 689999998764
No 111
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.97 E-value=5e-05 Score=65.77 Aligned_cols=139 Identities=16% Similarity=0.027 Sum_probs=77.7
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-c--c-ccChHHHHHHHHHHHhCCCCceEEEEEC-C-e--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-E--V-FFNRDDEIRTFECMSSQGQGPRLLGRFG-D-G--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-~--~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~-~--~v 110 (267)
.+..|..|....||++.... ++..+.+|...... . . .....+|..+++.+....+.+ .+..+. + . ++
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~-~~~~~~~~~~~~lv 78 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVS-LAYAYETKDALCLV 78 (285)
T ss_pred EEEEEecCCCEEEEEEEEec----CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEE-EEEEEccCCeEEEE
Confidence 45667888889999997543 35788899765321 1 1 011135777777775544433 333332 2 2 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|++|..+... .. .... .. .. ......+.. .+...+..+-
T Consensus 79 ~e~~~~g~L~~~-------~~----------~~~~--~~-~~-~~~~~~~~~-----------------qi~~~l~~lH- 119 (285)
T cd05631 79 LTIMNGGDLKFH-------IY----------NMGN--PG-FD-EQRAIFYAA-----------------ELCCGLEDLQ- 119 (285)
T ss_pred EEecCCCcHHHH-------HH----------hhCC--CC-CC-HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 999998665310 00 0000 00 00 011111211 1122223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++++ +.+.|+||..+.
T Consensus 120 -------~~~iiH~dikp~Nill~~~-~~~kl~Dfg~~~ 150 (285)
T cd05631 120 -------RERIVYRDLKPENILLDDR-GHIRISDLGLAV 150 (285)
T ss_pred -------hCCEEeCCCCHHHEEECCC-CCEEEeeCCCcE
Confidence 2358999999999999874 679999998764
No 112
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.97 E-value=1.6e-05 Score=70.82 Aligned_cols=138 Identities=15% Similarity=0.147 Sum_probs=78.5
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEEC--C--eeE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFG--D--GRV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v 110 (267)
-...|..|....||++.... .+..+.+|+..... ........|..++..+....+. +++.... + .+|
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~-~~~~~~~~~~~~~lv 79 (350)
T cd05573 5 VIKVIGRGAFGEVWLVRDKD----TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIV-KLYYSFQDEEHLYLV 79 (350)
T ss_pred EEEEEEeCCcEEEEEEEECC----CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCcc-chhhheecCCeEEEE
Confidence 35667778889999998643 35789999875321 1011113566777666543333 3333332 2 288
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|++|.++.. .+.+-+.. + ......+.. .+...+..|..
T Consensus 80 ~e~~~~~~L~~--------------~l~~~~~l-------~--~~~~~~i~~-----------------qi~~aL~~LH~ 119 (350)
T cd05573 80 MEYMPGGDLMN--------------LLIRKDVF-------P--EETARFYIA-----------------ELVLALDSVHK 119 (350)
T ss_pred EcCCCCCCHHH--------------HHHHcCCC-------C--HHHHHHHHH-----------------HHHHHHHHHHH
Confidence 99998865431 11110000 0 011111221 12222333322
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|++|.|||++.+ +.+.|+||+.+..
T Consensus 120 --------~giiH~Dlkp~NIll~~~-~~~kL~Dfg~~~~ 150 (350)
T cd05573 120 --------LGFIHRDIKPDNILIDAD-GHIKLADFGLCKK 150 (350)
T ss_pred --------CCeeccCCCHHHeEECCC-CCEEeecCCCCcc
Confidence 459999999999999874 6899999998864
No 113
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=97.97 E-value=5.1e-05 Score=67.02 Aligned_cols=137 Identities=16% Similarity=0.117 Sum_probs=76.1
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc----ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV----FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~----~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~ 111 (267)
+..|..|....||++.... .+..+.+|+....... ......|..++..+..+...+.++..+. +. +|+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKG----TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred EEEEeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5567777788999997543 3578889987543210 0001234455544444444455555543 22 889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||++|..+.. .+ .+... . . ......+.. .+...+..|-
T Consensus 81 E~~~~g~L~~----------~~----~~~~~--~------~-~~~~~~~~~-----------------qi~~aL~~LH-- 118 (323)
T cd05616 81 EYVNGGDLMY----------QI----QQVGR--F------K-EPHAVFYAA-----------------EIAIGLFFLH-- 118 (323)
T ss_pred cCCCCCCHHH----------HH----HHcCC--C------C-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9998865421 01 00000 0 0 011111211 1222233332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++++ +.+.|+||..|.
T Consensus 119 ------~~~ivHrDlkp~Nill~~~-~~~kL~DfG~~~ 149 (323)
T cd05616 119 ------SKGIIYRDLKLDNVMLDSE-GHIKIADFGMCK 149 (323)
T ss_pred ------HCCEEecCCCHHHeEECCC-CcEEEccCCCce
Confidence 1259999999999999874 689999999774
No 114
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.96 E-value=7.8e-05 Score=63.06 Aligned_cols=146 Identities=11% Similarity=0.035 Sum_probs=77.8
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccccC-hHHHHHHHHHHHhCCCCceEEEEE--CC----eeE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVFFN-RDDEIRTFECMSSQGQGPRLLGRF--GD----GRV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~--~~----~~v 110 (267)
...+..|....+|++.... .+..+++|...... ..... ...|+++++.+...++. +++... .+ .++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 5 LETIGKGSFGTVRKVRRKS----DGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIV-RYYDRIIDRSNQTLYIV 79 (265)
T ss_pred eeeeccCCCeEEEEeeecC----CCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccc-eeeeeeecCCCCEEEEE
Confidence 3556777788999997543 35678888764321 11111 13566777666554443 333322 22 167
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|.++... +.+.... ... .. ......+.. .+...+..+-.
T Consensus 80 ~e~~~~~~L~~~--------------l~~~~~~---~~~-l~-~~~~~~~~~-----------------~i~~~l~~lH~ 123 (265)
T cd08217 80 MEYCEGGDLAQL--------------IQKCKKE---RKY-IE-EEFIWRILT-----------------QLLLALYECHN 123 (265)
T ss_pred ehhccCCCHHHH--------------HHHHhhc---ccC-CC-HHHHHHHHH-----------------HHHHHHHHHhc
Confidence 899888765321 1111000 000 01 111111211 12222222211
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.......++|+|++|+||++++ ++.+.++||+.+..
T Consensus 124 ---~~~~~~~i~h~dl~p~nili~~-~~~~kl~d~g~~~~ 159 (265)
T cd08217 124 ---RSDPGNTVLHRDLKPANIFLDA-NNNVKLGDFGLAKI 159 (265)
T ss_pred ---CccccCcceecCCCHHHEEEec-CCCEEEeccccccc
Confidence 0122677999999999999997 47899999997764
No 115
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.96 E-value=6.2e-05 Score=64.23 Aligned_cols=137 Identities=15% Similarity=0.180 Sum_probs=77.2
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECCe---eEEEeecC
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDG---RVEEFIHA 116 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~---~v~e~i~G 116 (267)
.+.+..|..+.+|++.... ...+.+|+..........-.+|.++++.+..-++ .++++...+. ++++|++|
T Consensus 11 ~~~lg~g~~~~v~~~~~~~-----~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~lv~e~~~~ 84 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNG-----TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-VQLYAVVSEEPIYIVTEYMSK 84 (262)
T ss_pred eeecCCCCCCcEEEEEecC-----CceEEEEecccCccCHHHHHHHHHHHHhCCCCCc-ceEEEEECCCCcEEEEEcCCC
Confidence 4456777778999997532 3568889876432111111468888887764443 3344444322 88999988
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
.++.. ... ... .. .. ..+....+.. .+...+..+.
T Consensus 85 ~~L~~-------~~~----------~~~--~~-~~-~~~~~~~~~~-----------------~l~~aL~~lH------- 119 (262)
T cd05071 85 GSLLD-------FLK----------GEM--GK-YL-RLPQLVDMAA-----------------QIASGMAYVE------- 119 (262)
T ss_pred CcHHH-------HHh----------hcc--cc-CC-CHHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 76532 110 000 00 00 1112222221 1222223332
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.|+||+.+.
T Consensus 120 -~~~i~H~dl~p~Nill~~~-~~~~L~dfg~~~ 150 (262)
T cd05071 120 -RMNYVHRDLRAANILVGEN-LVCKVADFGLAR 150 (262)
T ss_pred -HCCccccccCcccEEEcCC-CcEEeccCCcee
Confidence 2348999999999999874 678999998875
No 116
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.95 E-value=5.5e-05 Score=68.34 Aligned_cols=136 Identities=13% Similarity=0.131 Sum_probs=77.5
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEECC-e---eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v 110 (267)
.+..|..|....||++.... .+..+++|+..... ........|..+++.+....+ +++++.+.+ . +|
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~i-v~~~~~~~~~~~~~lv 121 (370)
T cd05596 47 VIKVIGRGAFGEVQLVRHKS----SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWI-VQLHYAFQDDKYLYMV 121 (370)
T ss_pred EEEEEeeCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCc-ceEEEEEecCCEEEEE
Confidence 45567778888999997543 35788999864321 000011356777776654444 344444432 2 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. .. +.... +. .....+.. .+...++.|-+
T Consensus 122 ~Ey~~gg~L~~-------~l----------~~~~l-----~~--~~~~~~~~-----------------qi~~aL~~LH~ 160 (370)
T cd05596 122 MEYMPGGDLVN-------LM----------SNYDI-----PE--KWARFYTA-----------------EVVLALDAIHS 160 (370)
T ss_pred EcCCCCCcHHH-------HH----------HhcCC-----CH--HHHHHHHH-----------------HHHHHHHHHHH
Confidence 99999865532 11 11111 10 11111111 12223333322
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 161 --------~~ivHrDLkp~NILl~~~-~~~kL~DfG~~~ 190 (370)
T cd05596 161 --------MGFIHRDVKPDNMLLDKS-GHLKLADFGTCM 190 (370)
T ss_pred --------CCeeccCCCHHHEEEcCC-CCEEEEecccee
Confidence 348999999999999874 789999998764
No 117
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.95 E-value=5.7e-05 Score=66.77 Aligned_cols=134 Identities=17% Similarity=0.108 Sum_probs=74.7
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---c-cccChHHHHHHHHHHHhCCCCceEEEEEC-C-e--eEEEe
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---E-VFFNRDDEIRTFECMSSQGQGPRLLGRFG-D-G--RVEEF 113 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~-~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~-~--~v~e~ 113 (267)
.|..|....||++.... .+..+.+|+..... . ......+|..+++.+..-.+. ++++.+. + . +|+||
T Consensus 2 ~lG~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~-~~~~~~~~~~~~~lv~e~ 76 (323)
T cd05571 2 LLGKGTFGKVILVREKA----TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLT-ALKYSFQTHDRLCFVMEY 76 (323)
T ss_pred eeeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCC-CEEEEEEcCCEEEEEEeC
Confidence 35667788999997543 35788999875321 0 111113566667666543433 3443332 2 2 88999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|..+.. . +. ... + . ....+..+.. .+...++.+-
T Consensus 77 ~~~~~L~~----------~----l~---~~~-~----~-~~~~~~~~~~-----------------qi~~~L~~lH---- 112 (323)
T cd05571 77 ANGGELFF----------H----LS---RER-V----F-SEDRARFYGA-----------------EIVSALGYLH---- 112 (323)
T ss_pred CCCCcHHH----------H----HH---HcC-C----C-CHHHHHHHHH-----------------HHHHHHHHHH----
Confidence 98865421 0 10 000 0 0 0111221211 1222333332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||..|.
T Consensus 113 ----~~~ivHrDlkp~NIll~~~-~~~kl~DfG~a~ 143 (323)
T cd05571 113 ----SCDVVYRDLKLENLMLDKD-GHIKITDFGLCK 143 (323)
T ss_pred ----hCCeEeCCCCHHHEEECCC-CCEEEeeCCCCc
Confidence 2358999999999999874 679999999775
No 118
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.94 E-value=0.00013 Score=63.10 Aligned_cols=142 Identities=13% Similarity=0.104 Sum_probs=78.7
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC--C-------ee
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG--D-------GR 109 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~-------~~ 109 (267)
....+..|..+.+|++.... ++..+.+|...........-.+|+.+++.+.++.-.++++..+. + .+
T Consensus 26 ~~~~l~~g~~~~vy~~~~~~----~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~l 101 (291)
T cd06639 26 IIETIGKGTYGKVYKVTNKK----DGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWL 101 (291)
T ss_pred EEEEeecCCCeEEEEEEECC----CCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEE
Confidence 44566777788999997542 35788888875432111112367777777755543445554431 1 17
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
+++|++|.++.. +.+ .+... ... .. ...+..+.. .+...++.+-
T Consensus 102 v~ey~~~~sL~~-----------~~~---~~~~~---~~~-~~-~~~~~~~~~-----------------qi~~al~~lH 145 (291)
T cd06639 102 VLELCNGGSVTE-----------LVK---GLLIC---GQR-LD-EAMISYILY-----------------GALLGLQHLH 145 (291)
T ss_pred EEEECCCCcHHH-----------HHH---Hhhhc---CCC-CC-HHHHHHHHH-----------------HHHHHHHHHH
Confidence 899999876542 100 00000 000 00 111111111 1122222332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++.+ +.+.|+||..+.
T Consensus 146 --------~~~ivH~dlkp~nili~~~-~~~kl~dfg~~~ 176 (291)
T cd06639 146 --------NNRIIHRDVKGNNILLTTE-GGVKLVDFGVSA 176 (291)
T ss_pred --------hCCeeccCCCHHHEEEcCC-CCEEEeecccch
Confidence 2358999999999999874 679999998764
No 119
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.94 E-value=3.5e-05 Score=68.37 Aligned_cols=135 Identities=16% Similarity=0.171 Sum_probs=76.5
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccC-hHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEe
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFN-RDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEF 113 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~ 113 (267)
.|..|....||++.... .+..+.+|+..... ..... ...|..++..+.++...++++..+. +. +|+||
T Consensus 2 ~lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 77 (329)
T cd05618 2 VIGRGSYAKVLLVRLKK----TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 77 (329)
T ss_pred eeeeCCCeEEEEEEECC----CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeC
Confidence 35667789999998643 35788888875421 11111 1356666665555544455665543 22 88999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|..+.. .+.+-+. . + ......+.. .+...+..+.+
T Consensus 78 ~~~~~L~~--------------~~~~~~~--l-----~--~~~~~~i~~-----------------qi~~~l~~lH~--- 114 (329)
T cd05618 78 VNGGDLMF--------------HMQRQRK--L-----P--EEHARFYSA-----------------EISLALNYLHE--- 114 (329)
T ss_pred CCCCCHHH--------------HHHHcCC--C-----C--HHHHHHHHH-----------------HHHHHHHHHHH---
Confidence 99865521 0110000 0 0 011111221 12223333332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++.+ +.+.|+||..|.
T Consensus 115 -----~~ivH~Dikp~Nili~~~-~~~kL~DfG~~~ 144 (329)
T cd05618 115 -----RGIIYRDLKLDNVLLDSE-GHIKLTDYGMCK 144 (329)
T ss_pred -----CCeeeCCCCHHHEEECCC-CCEEEeeCCccc
Confidence 248999999999999874 689999998764
No 120
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.94 E-value=5.9e-05 Score=64.29 Aligned_cols=137 Identities=20% Similarity=0.191 Sum_probs=77.7
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEEEeecC
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RVEEFIHA 116 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~e~i~G 116 (267)
..+..|....+|++.... .+..+++|+...+.....+..+|+++++.+...++.+ +++... ++ ++++|++|
T Consensus 12 ~~ig~g~~~~v~~~~~~~----~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~~~ 86 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKK----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ-LLGVCTREPPFYIITEFMTY 86 (263)
T ss_pred eecCCcccceEEEEEEec----CCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhh-eEEEEcCCCCcEEEEEeCCC
Confidence 445777778999987543 3578889987644322112246888888775544443 344432 22 78999987
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
.++.. .+..-+. .. .. ...+..+.. .+.+.+..|.
T Consensus 87 ~~L~~--------------~~~~~~~-----~~-l~-~~~~~~~~~-----------------ql~~~l~~lH------- 121 (263)
T cd05052 87 GNLLD--------------YLRECNR-----QE-VN-AVVLLYMAT-----------------QISSAMEYLE------- 121 (263)
T ss_pred CcHHH--------------HHHhCCC-----CC-CC-HHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 66542 0111000 00 00 011111111 1222223332
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 122 -~~~i~H~dlkp~nil~~~~-~~~kl~df~~~~ 152 (263)
T cd05052 122 -KKNFIHRDLAARNCLVGEN-HLVKVADFGLSR 152 (263)
T ss_pred -hCCEeecccCcceEEEcCC-CcEEeCCCcccc
Confidence 2348999999999999874 679999999764
No 121
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.93 E-value=6.2e-05 Score=68.07 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=76.1
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--c--cccChHHHHHHHHHHHhCCCCceEEEEECC-e---eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--E--VFFNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v 110 (267)
.+..|..|....||++.... .+..+.+|+..... . .......|..+++.+....+ .+++..+.+ . +|
T Consensus 47 ~~~~lG~G~fg~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-v~~~~~~~~~~~~~lv 121 (370)
T cd05621 47 VVKVIGRGAFGEVQLVRHKS----SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-VQLFCAFQDDKYLYMV 121 (370)
T ss_pred EEEEEEecCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCE-eeEEEEEEcCCEEEEE
Confidence 45667888889999998643 35788888864311 0 00001246666655543333 334444332 2 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. .. .. + .. +. .....+.. .+...++.+-
T Consensus 122 ~Ey~~gg~L~~-------~l-------~~-~--~~-----~~--~~~~~~~~-----------------qil~aL~~LH- 159 (370)
T cd05621 122 MEYMPGGDLVN-------LM-------SN-Y--DV-----PE--KWAKFYTA-----------------EVVLALDAIH- 159 (370)
T ss_pred EcCCCCCcHHH-------HH-------Hh-c--CC-----CH--HHHHHHHH-----------------HHHHHHHHHH-
Confidence 99999866632 11 00 1 11 00 11111211 1222233332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 160 -------~~~IvHrDLKp~NILl~~~-~~~kL~DFG~a~ 190 (370)
T cd05621 160 -------SMGLIHRDVKPDNMLLDKH-GHLKLADFGTCM 190 (370)
T ss_pred -------HCCeEecCCCHHHEEECCC-CCEEEEecccce
Confidence 2359999999999999874 789999998775
No 122
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.93 E-value=5.8e-05 Score=63.13 Aligned_cols=138 Identities=15% Similarity=0.164 Sum_probs=79.8
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFI 114 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i 114 (267)
...+..|-...+|++.... ++..+++|....... ...+..+|++.++.+... -.++++..+. +. ++++|+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKR----TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHP-NIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred eeeeccCCceEEEEEEECC----CCcEEEEEEecccchhHHHHHHHHHHHHHhCCCC-CEeEEEEEEecCCeEEEEEecC
Confidence 4567777788999998643 357899998765432 112224677777777632 3344555442 22 789999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. .. .+ +. . ... ...+..+.. .+...+..+.
T Consensus 80 ~~~~L~~-------~~-------~~-~~--~----~~~-~~~~~~i~~-----------------~i~~~l~~lh----- 115 (253)
T cd05122 80 SGGSLKD-------LL-------KS-TN--Q----TLT-ESQIAYVCK-----------------ELLKGLEYLH----- 115 (253)
T ss_pred CCCcHHH-------HH-------hh-cC--C----CCC-HHHHHHHHH-----------------HHHHHHHHhh-----
Confidence 8876542 11 00 00 0 000 111111111 1112222222
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|.||++++ ++.+.|+||+.+..
T Consensus 116 ---~~~i~h~dl~p~ni~i~~-~~~~~l~d~~~~~~ 147 (253)
T cd05122 116 ---SNGIIHRDIKAANILLTS-DGEVKLIDFGLSAQ 147 (253)
T ss_pred ---cCCEecCCCCHHHEEEcc-CCeEEEeecccccc
Confidence 145899999999999997 46899999998754
No 123
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.93 E-value=4.8e-05 Score=65.78 Aligned_cols=140 Identities=11% Similarity=0.106 Sum_probs=78.8
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc----cc-cChHHHHHHHHHHHhCCCCceEEEEECCe----eE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE----VF-FNRDDEIRTFECMSSQGQGPRLLGRFGDG----RV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~----~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v 110 (267)
...|..|..+.+|++..... ..++..+.+|....... .. .....|.+++..+..+...++++..+..+ +|
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~-~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 83 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGG-HDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLI 83 (288)
T ss_pred EEEeccCCCceEEEEEEecc-ccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEE
Confidence 45677888889999874321 11356788887643211 11 11246888888887665445555444322 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|++|.++... + +.. .. .. ...+..|..+ +.+.+..+.
T Consensus 84 ~e~~~~~~L~~~----------~-------~~~----~~-~~-~~~~~~~~~q-----------------l~~~l~~lH- 122 (288)
T cd05583 84 LDYVNGGELFTH----------L-------YQR----EH-FT-ESEVRVYIAE-----------------IVLALDHLH- 122 (288)
T ss_pred EecCCCCcHHHH----------H-------hhc----CC-cC-HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 999987654210 0 000 00 00 1112222221 222223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 123 -------~~~~~H~dl~p~nil~~~~-~~~~l~dfg~~~ 153 (288)
T cd05583 123 -------QLGIIYRDIKLENILLDSE-GHVVLTDFGLSK 153 (288)
T ss_pred -------HCCeeccCCCHHHeEECCC-CCEEEEECcccc
Confidence 2348999999999999874 679999998654
No 124
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.92 E-value=3.3e-05 Score=68.16 Aligned_cols=135 Identities=16% Similarity=0.142 Sum_probs=76.5
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEECC--e--eEEEe
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RVEEF 113 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e~ 113 (267)
.|..|....||++.... .+..+.+|+..... ........|..++..+..+...+++++.+.+ . +|+||
T Consensus 2 ~lG~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey 77 (316)
T cd05619 2 MLGKGSFGKVFLAELKG----TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEY 77 (316)
T ss_pred eeeeCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeC
Confidence 35667778999998643 35788899765421 1111113466666555455545556665532 2 88999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|.++.. .+.+-+.. . ......+.. .+...+..|-+
T Consensus 78 ~~~g~L~~--------------~l~~~~~~--------~-~~~~~~~~~-----------------qi~~al~~LH~--- 114 (316)
T cd05619 78 LNGGDLMF--------------HIQSCHKF--------D-LPRATFYAA-----------------EIICGLQFLHS--- 114 (316)
T ss_pred CCCCcHHH--------------HHHHcCCC--------C-HHHHHHHHH-----------------HHHHHHHHHHh---
Confidence 99866531 11110110 0 011111211 12222333322
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 115 -----~~ivHrdikp~Nil~~~~-~~~kl~Dfg~~~ 144 (316)
T cd05619 115 -----KGIVYRDLKLDNILLDTD-GHIKIADFGMCK 144 (316)
T ss_pred -----CCeEeCCCCHHHEEECCC-CCEEEccCCcce
Confidence 258999999999999874 679999998764
No 125
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.92 E-value=7.4e-05 Score=66.06 Aligned_cols=30 Identities=23% Similarity=0.233 Sum_probs=26.0
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 115 ~~ivHrDikp~NIll~~~-~~~kL~Dfg~~~ 144 (325)
T cd05594 115 KNVVYRDLKLENLMLDKD-GHIKITDFGLCK 144 (325)
T ss_pred CCEEecCCCCCeEEECCC-CCEEEecCCCCe
Confidence 359999999999999874 689999999764
No 126
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.92 E-value=3.9e-05 Score=68.03 Aligned_cols=137 Identities=12% Similarity=0.051 Sum_probs=79.1
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v 110 (267)
-...|..|....||++.... .+..+.+|+..... ...-...+|..+++.+..-++ .+++..+. +. ++
T Consensus 22 ~~~~lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 22 MGETLGTGSFGRVRIAKHKG----TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFI-VNMMCSFQDENRVYFL 96 (329)
T ss_pred EEEEEEecCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-CcEEEEEEcCCEEEEE
Confidence 45667778888999998643 35788899875321 111111367777777754333 34555443 22 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. .+.+ . ...+ ......+.. .+...+..|.+
T Consensus 97 ~e~~~~~~L~~--------------~l~~---~----~~~~--~~~~~~~~~-----------------qi~~aL~~LH~ 136 (329)
T PTZ00263 97 LEFVVGGELFT--------------HLRK---A----GRFP--NDVAKFYHA-----------------ELVLAFEYLHS 136 (329)
T ss_pred EcCCCCChHHH--------------HHHH---c----CCCC--HHHHHHHHH-----------------HHHHHHHHHHH
Confidence 99998865531 1111 0 0001 011111211 12223333332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 137 --------~~ivH~dlkp~NIll~~~-~~~kl~Dfg~~~ 166 (329)
T PTZ00263 137 --------KDIIYRDLKPENLLLDNK-GHVKVTDFGFAK 166 (329)
T ss_pred --------CCeeecCCCHHHEEECCC-CCEEEeeccCce
Confidence 248999999999999874 689999999875
No 127
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.91 E-value=6e-05 Score=66.27 Aligned_cols=133 Identities=17% Similarity=0.094 Sum_probs=73.3
Q ss_pred cCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---cc-ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEeec
Q 024452 44 KGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EV-FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFIH 115 (267)
Q Consensus 44 ~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i~ 115 (267)
..|..+.||++.... .+..+.+|+..... .. ......|..+++.+...++.+ ++..+. +. +|++|++
T Consensus 2 g~G~~g~Vy~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e~~~ 76 (312)
T cd05585 2 GKGSFGKVMQVRKRD----TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVP-LKFSFQSPEKLYLVLAFIN 76 (312)
T ss_pred CcCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEec-eeeEEecCCeEEEEEcCCC
Confidence 456678999997543 35678888764321 11 111135777777775444444 333332 22 8899998
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|..+.. .+.+ . .. .. ......+.. .+...+..+-+
T Consensus 77 ~g~L~~--------------~l~~---~----~~-~~-~~~~~~~~~-----------------qi~~~l~~lH~----- 111 (312)
T cd05585 77 GGELFH--------------HLQR---E----GR-FD-LSRARFYTA-----------------ELLCALENLHK----- 111 (312)
T ss_pred CCcHHH--------------HHHh---c----CC-CC-HHHHHHHHH-----------------HHHHHHHHHHh-----
Confidence 865531 0110 0 00 00 011111211 12223333322
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|++|.|||++.+ +.+.|+||..|..
T Consensus 112 ---~~i~HrDlkp~Nili~~~-~~~kl~Dfg~~~~ 142 (312)
T cd05585 112 ---FNVIYRDLKPENILLDYQ-GHIALCDFGLCKL 142 (312)
T ss_pred ---CCeEeCCCCHHHeEECCC-CcEEEEECccccc
Confidence 348999999999999874 6899999997753
No 128
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.90 E-value=6.2e-05 Score=65.01 Aligned_cols=136 Identities=13% Similarity=0.027 Sum_probs=73.5
Q ss_pred cCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc----cccChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEEEeec
Q 024452 44 KGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE----VFFNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RVEEFIH 115 (267)
Q Consensus 44 ~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~----~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~e~i~ 115 (267)
..|..+.||++.... .+..+.+|....... .+.....|..+++.+....+ .++...+. +. ++++|++
T Consensus 2 g~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~ 76 (280)
T cd05608 2 GKGGFGEVSACQMRA----TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFI-VSLAYAFQTKTDLCLVMTIMN 76 (280)
T ss_pred CCCCceeEEEEEEcc----CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcE-eeeeEEEcCCCeEEEEEeCCC
Confidence 456678999997543 357888887643211 11111357777777744333 33444332 22 8899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++... .. .... . ... .. ......+.. .+...++.+-
T Consensus 77 ~g~L~~~-------~~-------~~~~--~-~~~-l~-~~~~~~~~~-----------------qi~~~l~~lH------ 114 (280)
T cd05608 77 GGDLRYH-------IY-------NVDE--E-NPG-FP-EPRACFYTA-----------------QIISGLEHLH------ 114 (280)
T ss_pred CCCHHHH-------HH-------hccc--c-CCC-CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 8766421 00 0000 0 000 00 111111221 1222233332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||++++ ++.+.|+||..+.
T Consensus 115 --~~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~ 145 (280)
T cd05608 115 --QRRIIYRDLKPENVLLDN-DGNVRISDLGLAV 145 (280)
T ss_pred --HCCcccCCCCHHHEEECC-CCCEEEeeCccce
Confidence 135899999999999987 4679999998774
No 129
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.89 E-value=1.4e-05 Score=70.03 Aligned_cols=90 Identities=23% Similarity=0.355 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHhCCC-CceEEEEECCeeEEEeecCCCCCcc-cCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHH
Q 024452 83 DDEIRTFECMSSQGQ-GPRLLGRFGDGRVEEFIHARTLSAA-DIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKW 160 (267)
Q Consensus 83 ~~E~~~~~~l~~~gl-~P~v~~~~~~~~v~e~i~G~~l~~~-~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~ 160 (267)
.+|++.++.|.++|+ +|+++.+.....||+.|+|-++..- .+.++ +.++..+
T Consensus 158 ~kEfafmkaL~e~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v~d~-----------------------~~ly~~l--- 211 (465)
T KOG2268|consen 158 TKEFAFMKALYERGFPVPKPIDHNRHCVVMELVDGYPLRQVRHVEDP-----------------------PTLYDDL--- 211 (465)
T ss_pred HHHHHHHHHHHHcCCCCCCcccccceeeHHHhhcccceeeeeecCCh-----------------------HHHHHHH---
Confidence 479999999999997 5999999988899999999887641 12221 2222211
Q ss_pred HHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 161 VSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
...+-+|. ..+++||||+--|||+.++ +.+++|||--+
T Consensus 212 ---------------------m~~Iv~la--------~~GlIHgDFNEFNimv~dd-~~i~vIDFPQm 249 (465)
T KOG2268|consen 212 ---------------------MGLIVRLA--------NHGLIHGDFNEFNIMVKDD-DKIVVIDFPQM 249 (465)
T ss_pred ---------------------HHHHHHHH--------HcCceecccchheeEEecC-CCEEEeechHh
Confidence 11112222 2359999999999999974 67999999755
No 130
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.89 E-value=0.00017 Score=62.44 Aligned_cols=142 Identities=13% Similarity=0.062 Sum_probs=80.8
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-c-ccChHHHHHHHHHHHhCCCCceEEEEE--C-C---ee
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-V-FFNRDDEIRTFECMSSQGQGPRLLGRF--G-D---GR 109 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~~~~l~~~gl~P~v~~~~--~-~---~~ 109 (267)
-.+..+..|....+|++.... .+..+++|....... . .....+|+++++.+...++.+ +++.+ . . .+
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~-~~~~~~~~~~~~~~l 78 (287)
T cd06621 4 VELSRLGEGAGGSVTKCRLKN----TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVK-YYGAFLDESSSSIGI 78 (287)
T ss_pred EEEEEeccCCceEEEEEEECC----CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeee-eeeEEEccCCCeEEE
Confidence 356778888888999998643 357888888754321 1 111246888887776545444 33332 2 2 27
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
++||++|.++.. . +.+... +... .. ...+..+.. .+...+..+.
T Consensus 79 v~e~~~~~~L~~-------~---l~~~~~--~~~~------l~-~~~~~~i~~-----------------~i~~~L~~lH 122 (287)
T cd06621 79 AMEYCEGGSLDS-------I---YKKVKK--RGGR------IG-EKVLGKIAE-----------------SVLKGLSYLH 122 (287)
T ss_pred EEEecCCCCHHH-------H---HHHHHh--cCCC------CC-HHHHHHHHH-----------------HHHHHHHHHH
Confidence 899999876532 1 111110 0000 00 011111111 1222223332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++++||+++++ +.+.++||..+.
T Consensus 123 --------~~~i~H~dl~~~nil~~~~-~~~~l~dfg~~~ 153 (287)
T cd06621 123 --------SRKIIHRDIKPSNILLTRK-GQVKLCDFGVSG 153 (287)
T ss_pred --------HCCcccCCCCHHHEEEecC-CeEEEeeccccc
Confidence 2358999999999999874 679999998765
No 131
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.89 E-value=8.6e-05 Score=64.83 Aligned_cols=137 Identities=15% Similarity=0.116 Sum_probs=77.6
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
.+..|..|....||++.... .+..+++|+...... ......+|+.+++.+...++. +++.... +. +|++
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKV----NGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIV-LLHDIIHTKETLTLVFE 83 (303)
T ss_pred EeeeEEecCCEEEEEEEECC----CCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcC-eEEEEEecCCeEEEEEE
Confidence 46677888888999998643 357889998653321 111224688888877654443 3444433 22 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.-. .. +.+ |.... ..+.+..+..+ +...++.+-+
T Consensus 84 ~~~~~l~-----------~~----~~~-~~~~~-------~~~~~~~~~~q-----------------i~~al~~lH~-- 121 (303)
T cd07869 84 YVHTDLC-----------QY----MDK-HPGGL-------HPENVKLFLFQ-----------------LLRGLSYIHQ-- 121 (303)
T ss_pred CCCcCHH-----------HH----HHh-CCCCC-------CHHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9875211 00 100 11000 01112222211 2222233322
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 122 ------~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~ 151 (303)
T cd07869 122 ------RYILHRDLKPQNLLISDT-GELKLADFGLAR 151 (303)
T ss_pred ------CCeecCCCCHHHEEECCC-CCEEECCCCcce
Confidence 248999999999999874 679999998763
No 132
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=97.89 E-value=0.00012 Score=63.39 Aligned_cols=137 Identities=15% Similarity=0.139 Sum_probs=78.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccC-hHHHHHHHHHHHhCCCCceEEEEECCe----eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFN-RDDEIRTFECMSSQGQGPRLLGRFGDG----RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~ 111 (267)
...|..|....+|++.... .+..+++|...... ....+ ..+|+++++.+. +.-.++++....++ +++
T Consensus 6 ~~~ig~g~~~~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKG----SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred EEEeecCCCeEEEEEEEcC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEEE
Confidence 4566777788999998643 35788898764321 01111 135777777776 33334555554322 889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||++|.++.. .+.+-.. .. ......+.. .+.+.+..+-
T Consensus 81 e~~~~~~L~~--------------~~~~~~~--------l~-~~~~~~~~~-----------------qil~~l~~lH-- 118 (290)
T cd05580 81 EYVPGGELFS--------------HLRKSGR--------FP-EPVARFYAA-----------------QVVLALEYLH-- 118 (290)
T ss_pred ecCCCCCHHH--------------HHHHcCC--------CC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9998865431 0111000 00 011111211 1222223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|.||+++++ +.+.|+||+.+..
T Consensus 119 ------~~~i~H~dl~p~nili~~~-~~~kl~dfg~~~~ 150 (290)
T cd05580 119 ------SLDIVYRDLKPENLLLDSD-GYIKITDFGFAKR 150 (290)
T ss_pred ------HCCEecCCCCHHHEEECCC-CCEEEeeCCCccc
Confidence 1358999999999999874 6799999998754
No 133
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.88 E-value=7.7e-05 Score=65.92 Aligned_cols=136 Identities=16% Similarity=0.092 Sum_probs=76.4
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---cccc-ChHHHHHHHHHHHhC--CCCceEEEEECC--e--e
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFF-NRDDEIRTFECMSSQ--GQGPRLLGRFGD--G--R 109 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~-dr~~E~~~~~~l~~~--gl~P~v~~~~~~--~--~ 109 (267)
+..|..|....||++.... .+..+++|+..... .... ....|..++..++.. .-..++++.+.+ . +
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKK----TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred EEEEeecCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 4567778888999997543 35789999875321 1111 113455555555432 223455555432 2 8
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
|+||++|..+.. .++.... . ......|..+ +...+..+-
T Consensus 80 v~E~~~~~~L~~-----------------~~~~~~l------~-~~~~~~~~~q-----------------i~~al~~lH 118 (324)
T cd05589 80 VMEYAAGGDLMM-----------------HIHTDVF------S-EPRAVFYAAC-----------------VVLGLQYLH 118 (324)
T ss_pred EEcCCCCCcHHH-----------------HhhcCCC------C-HHHHHHHHHH-----------------HHHHHHHHH
Confidence 899998865421 0111000 0 0111122211 222223332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+ ..++|+|++|.||+++++ +.+.|+||..|.
T Consensus 119 ~--------~~ivHrdlkp~Nill~~~-~~~kL~Dfg~~~ 149 (324)
T cd05589 119 E--------NKIVYRDLKLDNLLLDTE-GFVKIADFGLCK 149 (324)
T ss_pred h--------CCeEecCCCHHHeEECCC-CcEEeCcccCCc
Confidence 1 348999999999999874 689999999765
No 134
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.88 E-value=4.3e-05 Score=67.39 Aligned_cols=29 Identities=17% Similarity=0.175 Sum_probs=25.7
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++.+ +.+.|+||..|.
T Consensus 116 ~ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~ 144 (321)
T cd05603 116 NIIYRDLKPENILLDSQ-GHVVLTDFGLCK 144 (321)
T ss_pred CeEeccCCHHHeEECCC-CCEEEccCCCCc
Confidence 48999999999999874 689999999765
No 135
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.88 E-value=0.00012 Score=64.90 Aligned_cols=139 Identities=16% Similarity=0.136 Sum_probs=79.4
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cccC-hHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VFFN-RDDEIRTFECMSSQGQGPRLLGRFG-DG---RVE 111 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~ 111 (267)
-.+..|..|....||++.... .+..+.+|+...... .... -.+|+++++.+..-++. ++++... ++ +++
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 8 ERISELGAGNGGVVTKVQHKP----SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV-GFYGAFYSDGEISICM 82 (331)
T ss_pred eEEEeecCCCCEEEEEEEECC----CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCC-eEEEEEEECCEEEEEe
Confidence 356777888888999998643 356777887654321 1111 14688888777544443 3444432 22 889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|.++.. .. .+ .. ..+ ...+..+.. .+...+..+-
T Consensus 83 e~~~~~~L~~-------~l-------~~---~~----~~~--~~~~~~~~~-----------------~i~~~l~~lH-- 120 (331)
T cd06649 83 EHMDGGSLDQ-------VL-------KE---AK----RIP--EEILGKVSI-----------------AVLRGLAYLR-- 120 (331)
T ss_pred ecCCCCcHHH-------HH-------HH---cC----CCC--HHHHHHHHH-----------------HHHHHHHHHh--
Confidence 9999866532 11 00 00 000 011111111 1122223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
....++|+|++|.|||++++ +.+.|+||..+.
T Consensus 121 -----~~~~ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~ 152 (331)
T cd06649 121 -----EKHQIMHRDVKPSNILVNSR-GEIKLCDFGVSG 152 (331)
T ss_pred -----hcCCEEcCCCChhhEEEcCC-CcEEEccCcccc
Confidence 11248999999999999874 679999998764
No 136
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.87 E-value=9.1e-05 Score=62.85 Aligned_cols=137 Identities=18% Similarity=0.149 Sum_probs=77.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeec
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIH 115 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~ 115 (267)
...|..|....+|++.... ...+++|..........+..+|+.+++.+.... .++++....+ .++++|++
T Consensus 11 ~~~ig~g~~~~v~~~~~~~-----~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNG-----TTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDK-LVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred eeeeccCcceEEEEEEEcC-----CceEEEEEecCCccCHHHHHHHHHHHhhCCCCC-EeeeeeeeecCCceEEEEeccC
Confidence 3556777788999987532 367888887654321112246777777776433 3445554432 28899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++... . +... .. ... ......+.. .+...+..+.
T Consensus 85 ~~~L~~~-------i----------~~~~--~~-~~~-~~~~~~~~~-----------------~i~~al~~lh------ 120 (261)
T cd05034 85 KGSLLDF-------L----------KSGE--GK-KLR-LPQLVDMAA-----------------QIAEGMAYLE------ 120 (261)
T ss_pred CCCHHHH-------H----------hccc--cC-CCC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 8765321 1 1100 00 011 111222221 1222233332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.++||+.+.
T Consensus 121 --~~~i~h~di~p~nili~~~-~~~~l~d~g~~~ 151 (261)
T cd05034 121 --SRNYIHRDLAARNILVGEN-LVCKIADFGLAR 151 (261)
T ss_pred --hCCcccCCcchheEEEcCC-CCEEECccccce
Confidence 1248999999999999874 689999998764
No 137
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.87 E-value=0.00018 Score=62.24 Aligned_cols=140 Identities=16% Similarity=0.002 Sum_probs=78.4
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---cc-ccChHHHHHHHHHHHhCCCCceEEEEEC-Ce--eEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EV-FFNRDDEIRTFECMSSQGQGPRLLGRFG-DG--RVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~--~v~ 111 (267)
....|..|..+.+|++.... .+..+.+|...... .. .....+|+++++.+....+.+-...... +. +++
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRA----TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred EEEEEecCCCeEEEEEEECC----CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence 34567777788999987543 35788889875431 01 1111368888888866555543323222 22 789
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|..+... . +.... . .-.......+..+ +...+..+-
T Consensus 80 e~~~~~~L~~~-------~----------~~~~~--~--~~~~~~~~~~~~q-----------------l~~~l~~lH-- 119 (285)
T cd05632 80 TIMNGGDLKFH-------I----------YNMGN--P--GFEEERALFYAAE-----------------ILCGLEDLH-- 119 (285)
T ss_pred EeccCccHHHH-------H----------HHhcC--C--CCCHHHHHHHHHH-----------------HHHHHHHHH--
Confidence 99987655310 0 00000 0 0011112222211 122223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.|+||..+.
T Consensus 120 ------~~~iiH~dikp~Nili~~~-~~~kl~Dfg~~~ 150 (285)
T cd05632 120 ------RENTVYRDLKPENILLDDY-GHIRISDLGLAV 150 (285)
T ss_pred ------hCCeeecCCCHHHEEECCC-CCEEEecCCcce
Confidence 2248999999999999874 679999999773
No 138
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.87 E-value=4.9e-05 Score=66.09 Aligned_cols=137 Identities=14% Similarity=0.036 Sum_probs=76.9
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---ccc-ChHHHHHHHHHHHhCCCCceEEEEECC--e--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---VFF-NRDDEIRTFECMSSQGQGPRLLGRFGD--G--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v 110 (267)
.+..|..|....+|++.... .+..+++|+...... ... ...+|..+++.+..-++. +++....+ . ++
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~~~~~~~~~~~~~lv 79 (291)
T cd05612 5 RIKTVGTGTFGRVHLVRDRI----SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFII-RLFWTEHDQRFLYML 79 (291)
T ss_pred eeeeeecCCCeEEEEEEEcC----CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHh-hhHhhhccCCeEEEE
Confidence 35667788889999998543 357888998643210 011 113677777777543332 23333322 1 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|.++.. .+.+-. .. + ......+.. .+...+..+-+
T Consensus 80 ~e~~~~~~L~~--------------~~~~~~--~~-----~--~~~~~~~~~-----------------qi~~~l~~lH~ 119 (291)
T cd05612 80 MEYVPGGELFS--------------YLRNSG--RF-----S--NSTGLFYAS-----------------EIVCALEYLHS 119 (291)
T ss_pred EeCCCCCCHHH--------------HHHHcC--CC-----C--HHHHHHHHH-----------------HHHHHHHHHHH
Confidence 99998865431 011000 00 0 011111211 12222233321
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 120 --------~~i~H~dlkp~NIli~~~-~~~kl~Dfg~~~ 149 (291)
T cd05612 120 --------KEIVYRDLKPENILLDKE-GHIKLTDFGFAK 149 (291)
T ss_pred --------CCeeecCCCHHHeEECCC-CCEEEEecCcch
Confidence 348999999999999874 689999998765
No 139
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.87 E-value=8e-05 Score=64.25 Aligned_cols=136 Identities=12% Similarity=0.127 Sum_probs=77.1
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--cccc-ChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVFF-NRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
+..|..|..+.+|++.... .+..+.+|+..... .... ...+|+.+++.+...++.+ ++..+. +. +|+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e 80 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKE----TKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVE-LKEAFRRRGKLYLVFE 80 (287)
T ss_pred EEEecccCCEEEEEEEECC----CCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccc-hhhhEecCCEEEEEEe
Confidence 4567778888999998643 35778888775432 1111 1146888888776555443 232222 22 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|..+.. + +.... . .. ...+..+..+ +...+..+-
T Consensus 81 ~~~~~~l~~-----------~-------~~~~~--~--~~-~~~~~~~~~q-----------------i~~~L~~lH--- 117 (287)
T cd07848 81 YVEKNMLEL-----------L-------EEMPN--G--VP-PEKVRSYIYQ-----------------LIKAIHWCH--- 117 (287)
T ss_pred cCCCCHHHH-----------H-------HhcCC--C--CC-HHHHHHHHHH-----------------HHHHHHHHH---
Confidence 998743210 0 01000 0 00 1112222221 222223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||..|.
T Consensus 118 -----~~~i~H~dlkp~Nill~~~-~~~kl~Dfg~~~ 148 (287)
T cd07848 118 -----KNDIVHRDIKPENLLISHN-DVLKLCDFGFAR 148 (287)
T ss_pred -----HCCeecCCCCHHHEEEcCC-CcEEEeeccCcc
Confidence 1248999999999999874 689999999875
No 140
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.86 E-value=9.3e-05 Score=62.87 Aligned_cols=138 Identities=15% Similarity=0.171 Sum_probs=78.1
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEee
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFI 114 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i 114 (267)
-+..+..|..+.+|++.... +..+++|..............|..+++.+...++.+ +++...+ .++++|+
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 10 LVKKLGAGQFGEVWMGYYNN-----STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVR-LYAVVTKEEPIYIITEYM 83 (261)
T ss_pred EeeecCCcCCceEEEEEecC-----CceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeee-EEEEEcCCCCcEEEEecC
Confidence 36667778788999987532 467888876543211111236888888776544433 4443332 2889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. .. +... ... . .......|..+ +...++.|-+
T Consensus 84 ~~~~L~~-------~l----------~~~~--~~~-~-~~~~~~~~~~~-----------------l~~~l~~LH~---- 121 (261)
T cd05072 84 AKGSLLD-------FL----------KSDE--GGK-V-LLPKLIDFSAQ-----------------IAEGMAYIER---- 121 (261)
T ss_pred CCCcHHH-------HH----------HHhc--CCC-C-CHHHHHHHHHH-----------------HHHHHHHHHH----
Confidence 8765532 01 1100 000 0 11122222221 2222333321
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.+.||+.+.
T Consensus 122 ----~~i~H~dl~p~nili~~~-~~~~l~dfg~~~ 151 (261)
T cd05072 122 ----KNYIHRDLRAANVLVSES-LMCKIADFGLAR 151 (261)
T ss_pred ----CCeeccccchhhEEecCC-CcEEECCCccce
Confidence 248999999999999974 678999998875
No 141
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=97.86 E-value=0.00012 Score=67.54 Aligned_cols=140 Identities=16% Similarity=0.181 Sum_probs=89.3
Q ss_pred CcEEEE-EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc------ccccChHHHHHHHHHHHhCCCCceEEEEECCe
Q 024452 36 DALQVI-PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV------EVFFNRDDEIRTFECMSSQGQGPRLLGRFGDG 108 (267)
Q Consensus 36 ~~~~i~-~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~------~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~ 108 (267)
.++.+- .+..|--.+||+.+-.. .+..|.+|+..+.- ..++ ..|-.+|..|+.+--.-++|.++.|.
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~----t~keYAiKVl~K~~Iike~KvkYV--~~Ek~~l~~L~~hPgivkLy~TFQD~ 146 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKA----TGKEYAIKVLDKRYIIKEKKVKYV--TREKEALTQLSGHPGIVKLYFTFQDE 146 (604)
T ss_pred hhcchhheeccccceeEEEeeecC----CCceeeHhhhhHHHHHhhcccchh--hHHHHHHHHhhCCCCeEEEEEEeecc
Confidence 455544 44788889999997543 35788888775421 1233 37888999998664456788887643
Q ss_pred ----eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHH
Q 024452 109 ----RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDE 184 (267)
Q Consensus 109 ----~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (267)
.|.+|.++..+ ...+.++-+ +-+...+|+. ..+...
T Consensus 147 ~sLYFvLe~A~nGdl--------------l~~i~K~Gs----------fde~caR~YA----------------AeIldA 186 (604)
T KOG0592|consen 147 ESLYFVLEYAPNGDL--------------LDLIKKYGS----------FDETCARFYA----------------AEILDA 186 (604)
T ss_pred cceEEEEEecCCCcH--------------HHHHHHhCc----------chHHHHHHHH----------------HHHHHH
Confidence 78899886332 222222211 1123333432 112233
Q ss_pred HHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 185 ISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 185 ~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
++.| +..+++|+|++|.|||++.+ +.+.|-||..|..
T Consensus 187 leyl--------H~~GIIHRDlKPENILLd~d-mhikITDFGsAK~ 223 (604)
T KOG0592|consen 187 LEYL--------HSNGIIHRDLKPENILLDKD-GHIKITDFGSAKI 223 (604)
T ss_pred HHHH--------HhcCceeccCChhheeEcCC-CcEEEeecccccc
Confidence 3433 45679999999999999985 7899999998865
No 142
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.85 E-value=9.3e-05 Score=62.68 Aligned_cols=137 Identities=15% Similarity=0.116 Sum_probs=77.5
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEeec
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFIH 115 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i~ 115 (267)
...+..|....+|++... +..+++|.............+|..+++.+...++. ++++... +. ++++|.+
T Consensus 11 ~~~ig~g~~g~v~~~~~~------~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 11 GATIGKGEFGDVMLGDYR------GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLV-QLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred eeeeecCCCceEEEEEec------CcEEEEEEeccchhHHHHHHHHHHHHHhcCCccee-eeEEEEcCCCCeEEEEEecC
Confidence 445677777899998742 47888998755432111114678888777654443 3344332 22 8899998
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++.. .. .+-.. . .-.......+..+ +...+..+.
T Consensus 84 ~~~L~~-------~~-------~~~~~-----~--~~~~~~~~~~~~q-----------------i~~~l~~lh------ 119 (256)
T cd05039 84 KGSLVD-------YL-------RSRGR-----A--VITLAQQLGFALD-----------------VCEGMEYLE------ 119 (256)
T ss_pred CCcHHH-------HH-------HhcCC-----C--CCCHHHHHHHHHH-----------------HHHHHHHHH------
Confidence 765532 11 00000 0 0011112222211 122222332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|+||+++++ +.+.|+||+.+..
T Consensus 120 --~~~i~H~di~p~Nili~~~-~~~~l~d~g~~~~ 151 (256)
T cd05039 120 --EKNFVHRDLAARNVLVSED-LVAKVSDFGLAKE 151 (256)
T ss_pred --hCCccchhcccceEEEeCC-CCEEEcccccccc
Confidence 2358999999999999874 6789999997764
No 143
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.85 E-value=0.0001 Score=63.57 Aligned_cols=142 Identities=14% Similarity=0.127 Sum_probs=79.3
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-c-cChHHHHHHHHHHHhCCCCceEEEEE-C---Ce--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-F-FNRDDEIRTFECMSSQGQGPRLLGRF-G---DG--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~-~dr~~E~~~~~~l~~~gl~P~v~~~~-~---~~--~v 110 (267)
.+..|..|....+|.+.........+..+.+|........ . ..-.+|+++++.+...++.+ +++.. . .. ++
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~~lv 86 (284)
T cd05079 8 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK-YKGICTEDGGNGIKLI 86 (284)
T ss_pred hceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeee-eeeEEecCCCCceEEE
Confidence 4566777878899998743111113578888986543211 1 11246788887775544444 33332 2 12 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|.++... . . +...+ .+ +.....+.. .+...+..+-
T Consensus 87 ~e~~~g~~L~~~-------l-------~---~~~~~----~~-~~~~~~i~~-----------------~i~~aL~~lH- 126 (284)
T cd05079 87 MEFLPSGSLKEY-------L-------P---RNKNK----IN-LKQQLKYAV-----------------QICKGMDYLG- 126 (284)
T ss_pred EEccCCCCHHHH-------H-------H---hccCC----CC-HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 999998776421 1 0 00000 01 111111211 1122223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|.||+.+.
T Consensus 127 -------~~gi~H~dlkp~Nil~~~~-~~~~l~dfg~~~ 157 (284)
T cd05079 127 -------SRQYVHRDLAARNVLVESE-HQVKIGDFGLTK 157 (284)
T ss_pred -------HCCeeecccchheEEEcCC-CCEEECCCcccc
Confidence 2359999999999999874 679999999764
No 144
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.85 E-value=9.2e-05 Score=63.23 Aligned_cols=139 Identities=13% Similarity=0.066 Sum_probs=77.5
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccChHHHHHHHHHHHhCCCCceEEEEECC--e--eEEEeec
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RVEEFIH 115 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e~i~ 115 (267)
..+..|....+|++.... ++..+.+|........ .....+|+.+++.++..++. ++++.+.. . ++++|++
T Consensus 14 ~~lg~g~~g~v~~~~~~~----~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~~ 88 (268)
T cd06624 14 VVLGKGTYGIVYAARDLS----TQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIV-QYLGSDSENGFFKIFMEQVP 88 (268)
T ss_pred EEEecCCceEEEEeEecC----CCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCee-eeeeeeccCCEEEEEEecCC
Confidence 456677778999997542 3567888876543211 11224677887777654444 34544432 2 7899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++... .. .+.+. .. .....+..+.. .+...+..+-
T Consensus 89 ~~~L~~~-------l~------~~~~~----~~---~~~~~~~~~~~-----------------qi~~al~~lH------ 125 (268)
T cd06624 89 GGSLSAL-------LR------SKWGP----LK---DNEQTIIFYTK-----------------QILEGLKYLH------ 125 (268)
T ss_pred CCCHHHH-------HH------Hhccc----CC---CcHHHHHHHHH-----------------HHHHHHHHHH------
Confidence 8766421 10 00000 00 00111111111 1222223332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+.+.+.|.||+.+.
T Consensus 126 --~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 126 --DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred --HCCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 13489999999999998644679999998764
No 145
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.85 E-value=0.00023 Score=60.56 Aligned_cols=139 Identities=14% Similarity=0.148 Sum_probs=77.4
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC-C--eeEEEee
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG-D--GRVEEFI 114 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~--~~v~e~i 114 (267)
.-...+..|..+.+|++.... +..+++|....+....-.-.+|+.+++.+...++.+- +.... . .++++|+
T Consensus 9 ~~~~~lg~g~~~~vy~~~~~~-----~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~-~~~~~~~~~~~v~e~~ 82 (260)
T cd05073 9 KLEKKLGAGQFGEVWMATYNK-----HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFM 82 (260)
T ss_pred eEEeEecCccceEEEEEEecC-----CccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceE-EEEEcCCCeEEEEEeC
Confidence 345666777788999997532 4678888765442211112368888887765454432 33322 2 2789998
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. . +. ... ... ........|.. .+...+..+-
T Consensus 83 ~~~~L~~-------~-------~~---~~~--~~~--~~~~~~~~~~~-----------------~l~~aL~~lH----- 119 (260)
T cd05073 83 AKGSLLD-------F-------LK---SDE--GSK--QPLPKLIDFSA-----------------QIAEGMAFIE----- 119 (260)
T ss_pred CCCcHHH-------H-------HH---hCC--ccc--cCHHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 8765531 0 10 000 000 01111222221 1222223332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||++++ ++.+.|+||+.+.
T Consensus 120 ---~~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~ 150 (260)
T cd05073 120 ---QRNYIHRDLRAANILVSA-SLVCKIADFGLAR 150 (260)
T ss_pred ---hCCccccccCcceEEEcC-CCcEEECCCccee
Confidence 124899999999999987 4678999998654
No 146
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.84 E-value=0.00013 Score=66.07 Aligned_cols=137 Identities=14% Similarity=0.130 Sum_probs=77.0
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEECC-e---e
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFGD-G---R 109 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~ 109 (267)
..+..|..|..+.||++.... .+..+.+|+..... ........|..+++.+....+ ++++..+.+ . +
T Consensus 46 ~i~~~lG~G~fg~Vy~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-v~~~~~~~~~~~~~l 120 (371)
T cd05622 46 EVVKVIGRGAFGEVQLVRHKS----TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-VQLFYAFQDDRYLYM 120 (371)
T ss_pred EEEEEEeecCCeEEEEEEECC----CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-CeEEEEEEcCCEEEE
Confidence 346667778888999998643 35788888864311 000001246666665543333 445554432 2 8
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
|+||++|..+.. .. .. ... +. .....+.. .+...++.|-
T Consensus 121 v~Ey~~gg~L~~-------~~-------~~---~~~-----~~--~~~~~~~~-----------------qi~~aL~~LH 159 (371)
T cd05622 121 VMEYMPGGDLVN-------LM-------SN---YDV-----PE--KWARFYTA-----------------EVVLALDAIH 159 (371)
T ss_pred EEcCCCCCcHHH-------HH-------Hh---cCC-----CH--HHHHHHHH-----------------HHHHHHHHHH
Confidence 899999866531 11 10 011 00 11111111 1222233332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 160 --------~~~ivHrDLkp~NIll~~~-~~ikL~DfG~a~ 190 (371)
T cd05622 160 --------SMGFIHRDVKPDNMLLDKS-GHLKLADFGTCM 190 (371)
T ss_pred --------HCCEEeCCCCHHHEEECCC-CCEEEEeCCcee
Confidence 2359999999999999874 689999998764
No 147
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.84 E-value=0.00015 Score=61.45 Aligned_cols=139 Identities=16% Similarity=0.133 Sum_probs=79.9
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEe
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEF 113 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~ 113 (267)
....+..|....+|++.... .+..+++|++...... .....+|+.+++.+..-++.+ .++... +. ++++|
T Consensus 7 ~~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 7 LIQRIGSGTYGDVYKARDIA----TGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVA-YFGSYLRRDKLWIVMEY 81 (262)
T ss_pred EEEEecCCCceEEEEeEecC----CCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhc-eEEEEEeCCEEEEEEeC
Confidence 35567788888999997543 2467889987543222 111246777777775555544 444332 22 78999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|.++..- ... +. .+ .+ ...+..+.. .+...+..|.
T Consensus 82 ~~~~~l~~~-------~~~--------~~--~~----l~-~~~~~~~~~-----------------ql~~~l~~lh---- 118 (262)
T cd06613 82 CGGGSLQDI-------YQV--------TR--GP----LS-ELQIAYVCR-----------------ETLKGLAYLH---- 118 (262)
T ss_pred CCCCcHHHH-------HHh--------hc--cC----CC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 998776421 100 00 00 01 111111211 1122223332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|.||+++.+ +.+.|.||..+..
T Consensus 119 ----~~~i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~ 150 (262)
T cd06613 119 ----ETGKIHRDIKGANILLTED-GDVKLADFGVSAQ 150 (262)
T ss_pred ----hCCceecCCChhhEEECCC-CCEEECccccchh
Confidence 2248999999999999974 6799999987653
No 148
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.84 E-value=0.00011 Score=62.04 Aligned_cols=146 Identities=20% Similarity=0.187 Sum_probs=78.8
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeecC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIHA 116 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~G 116 (267)
|..|.-..+|++...... ..+..+.+|+....... .....+|+..+..+. +.-.++++....+ .++++|.+|
T Consensus 3 ig~g~~g~v~~~~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 3 LGEGAFGEVYKGKLKGKD-GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred cccCCceEEEEEEEecCC-CCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEeccC
Confidence 555666789999764310 12578888887654321 111246777777776 3333445554432 288999988
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
.++... +..............-.......+..+ +...+..+-
T Consensus 81 ~~L~~~--------------l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------l~~al~~lH------- 122 (262)
T cd00192 81 GDLLDY--------------LRKSRPVFPSPEKSTLSLKDLLSFAIQ-----------------IAKGMEYLA------- 122 (262)
T ss_pred CcHHHH--------------HhhccccccccccccCCHHHHHHHHHH-----------------HHHHHHHHH-------
Confidence 776431 000000000000000011112222211 222223332
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 123 -~~~i~H~di~p~nili~~~-~~~~l~dfg~~~~ 154 (262)
T cd00192 123 -SKKFVHRDLAARNCLVGED-LVVKISDFGLSRD 154 (262)
T ss_pred -cCCcccCccCcceEEECCC-CcEEEcccccccc
Confidence 2458999999999999974 7899999988864
No 149
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.83 E-value=0.00014 Score=61.64 Aligned_cols=136 Identities=18% Similarity=0.121 Sum_probs=78.6
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeec
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIH 115 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~ 115 (267)
+..|..|..+.+|++.... +..+.+|..........+-.+|+.+++.+..-++.+ +++.+.. .++++|.+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~-----~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRA-----QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQ-LYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred eeEecCCcCceEEEEEecc-----CceEEEEecccCCccHHHHHHHHHHHHHCCCCCcee-EEEEEccCCCEEEEEEcCC
Confidence 4567778788999997542 357888876543211112246888888876544443 4444432 28899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++.. . +|.... . .+ ......+.. .+...++.+.
T Consensus 83 ~~~L~~-------~----------~~~~~~--~--~~-~~~~~~~~~-----------------~i~~~l~~lH------ 117 (256)
T cd05114 83 NGCLLN-------Y----------LRQRQG--K--LS-KDMLLSMCQ-----------------DVCEGMEYLE------ 117 (256)
T ss_pred CCcHHH-------H----------HHhCcc--C--CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 876531 0 111100 0 01 111111211 1222233332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.++||+.+.
T Consensus 118 --~~~i~H~dl~p~ni~i~~~-~~~kl~d~g~~~ 148 (256)
T cd05114 118 --RNSFIHRDLAARNCLVSST-GVVKVSDFGMTR 148 (256)
T ss_pred --HCCccccccCcceEEEcCC-CeEEECCCCCcc
Confidence 2348999999999999864 678999999775
No 150
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.82 E-value=0.00014 Score=68.18 Aligned_cols=141 Identities=11% Similarity=0.046 Sum_probs=75.3
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccC-hHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFN-RDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFI 114 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i 114 (267)
...+..|....+|++..... .+..+++|........... ..+|+.+++.+..-+ .++++..+. +. +|+||+
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~---~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpn-iv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSD---PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFG-IVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCC---CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCC-EeEEEEEEEECCEEEEEEECC
Confidence 34456666778999874321 1467777765332211111 135777776664433 344555543 22 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++... .. ..+ ....+. . ......+.. .+...++.+-
T Consensus 148 ~gg~L~~~-------l~---~~~----~~~~~l----~-~~~~~~i~~-----------------qi~~aL~~lH----- 186 (478)
T PTZ00267 148 SGGDLNKQ-------IK---QRL----KEHLPF----Q-EYEVGLLFY-----------------QIVLALDEVH----- 186 (478)
T ss_pred CCCCHHHH-------HH---HHH----hccCCC----C-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 98876421 10 000 000000 0 011111111 1112222222
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++++ +.+.|+||+.|.
T Consensus 187 ---~~~ivHrDlkp~NIll~~~-~~~kL~DFgla~ 217 (478)
T PTZ00267 187 ---SRKMMHRDLKSANIFLMPT-GIIKLGDFGFSK 217 (478)
T ss_pred ---hCCEEECCcCHHhEEECCC-CcEEEEeCcCce
Confidence 2359999999999999974 689999999875
No 151
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.81 E-value=0.0001 Score=69.35 Aligned_cols=138 Identities=16% Similarity=0.167 Sum_probs=79.7
Q ss_pred CcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccCh------HHHHHHHHHHHhCCCCceEEEEECC--
Q 024452 36 DALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNR------DDEIRTFECMSSQGQGPRLLGRFGD-- 107 (267)
Q Consensus 36 ~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr------~~E~~~~~~l~~~gl~P~v~~~~~~-- 107 (267)
-.+.|..|.-|.-.+|.+|.-.+ ...-|.+|-..+.. .+.| +.|..+|..+ .....-++|+.+.+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvD----T~~lYAmKTLrKaD--Vl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkd 702 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVD----TRALYAMKTLRKAD--VLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKD 702 (1034)
T ss_pred ceEEEeeecccccceeEEEeecc----hhhHHHHhhhHHHH--HHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCC
Confidence 45678888777777777775321 12334444332211 1111 2455555433 23467888988754
Q ss_pred e--eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHH
Q 024452 108 G--RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEI 185 (267)
Q Consensus 108 ~--~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (267)
. .||+||+|..+- .+|-++- -+-+.+.+|+-. + +-=.+
T Consensus 703 nLYFVMdYIPGGDmM--------------SLLIrmg----------IFeE~LARFYIA--E--------------ltcAi 742 (1034)
T KOG0608|consen 703 NLYFVMDYIPGGDMM--------------SLLIRMG----------IFEEDLARFYIA--E--------------LTCAI 742 (1034)
T ss_pred ceEEEEeccCCccHH--------------HHHHHhc----------cCHHHHHHHHHH--H--------------HHHHH
Confidence 2 899999985432 1111111 122345554311 1 11111
Q ss_pred HHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 186 SMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 186 ~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+. -+..+|||+|++|+|||+|.+ |-+.|-||..|.
T Consensus 743 es--------VHkmGFIHRDiKPDNILIDrd-GHIKLTDFGLCT 777 (1034)
T KOG0608|consen 743 ES--------VHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCT 777 (1034)
T ss_pred HH--------HHhccceecccCccceEEccC-Cceeeeeccccc
Confidence 22 355789999999999999985 679999999985
No 152
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.81 E-value=0.00016 Score=63.23 Aligned_cols=75 Identities=12% Similarity=0.022 Sum_probs=45.1
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCc--eEEEEEcCCCc-ccc-cChHHHHHHHHHHHhCCCCceEEEEECC-e---eEEE
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLAR--NVLVRIYGEGV-EVF-FNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RVEE 112 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~--~~vlRi~~~~~-~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v~e 112 (267)
..|..|....+|++.... ++. .+.+|...... ... ....+|+.++..+.++.-.+++++.+.. + +++|
T Consensus 13 ~~lg~G~~g~V~~a~~~~----~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 88 (303)
T cd05088 13 DVIGEGNFGQVLKARIKK----DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 88 (303)
T ss_pred eeecCCCCceEEEEEEcc----CCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEE
Confidence 456777778999997532 123 33444433221 111 1123688888888666555677776643 2 8899
Q ss_pred eecCCCC
Q 024452 113 FIHARTL 119 (267)
Q Consensus 113 ~i~G~~l 119 (267)
|++|.++
T Consensus 89 ~~~~~~L 95 (303)
T cd05088 89 YAPHGNL 95 (303)
T ss_pred eCCCCcH
Confidence 9998654
No 153
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.81 E-value=0.00012 Score=61.60 Aligned_cols=134 Identities=18% Similarity=0.098 Sum_probs=74.7
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEEC--C--eeEEEeec
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFG--D--GRVEEFIH 115 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~e~i~ 115 (267)
.|..|..+.+|++... ++..+++|+....... .....+|.++++.+..-++.+ ++.... + .+++||++
T Consensus 2 ~ig~g~~g~vy~~~~~-----~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~~ 75 (250)
T cd05085 2 LLGKGNFGEVFKGTLK-----DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVK-LIGVCTQRQPIYIVMELVP 75 (250)
T ss_pred ccCCCCCceEEEEEec-----CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCe-EEEEEecCCccEEEEECCC
Confidence 3556667899999743 2578899987654321 111236777777775444433 444432 2 28899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++... +. .... ... ...+..+..+ +...+..+.
T Consensus 76 ~~~L~~~--------------~~---~~~~----~~~-~~~~~~~~~~-----------------i~~~l~~lH------ 110 (250)
T cd05085 76 GGDFLSF--------------LR---KKKD----ELK-TKQLVKFALD-----------------AAAGMAYLE------ 110 (250)
T ss_pred CCcHHHH--------------HH---hcCC----CCC-HHHHHHHHHH-----------------HHHHHHHHH------
Confidence 8654320 00 0000 001 1111112111 112222222
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.++||+.+.
T Consensus 111 --~~~~~H~dl~p~nili~~~-~~~~l~d~g~~~ 141 (250)
T cd05085 111 --SKNCIHRDLAARNCLVGEN-NVLKISDFGMSR 141 (250)
T ss_pred --hCCeeecccChheEEEcCC-CeEEECCCccce
Confidence 2348999999999999874 678999998764
No 154
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.81 E-value=0.00025 Score=61.03 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=75.0
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cc-cChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VF-FNRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~e~ 113 (267)
++.+..|..+.+|++.... .+..+.+|+...+.. .. ....+|..+++.+..-.+ .++++.+ .+. +++||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLL----TRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYI-IGFYGAFFVENRISICTEF 80 (279)
T ss_pred eeeeccCCCeEEEEEEEcC----CCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCe-eeEEEEEEECCEEEEEEec
Confidence 4567788888999997532 357888888654321 11 011256666666643233 3344433 222 88999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|..+... . .. +. ..+..+.. .+...+..+-
T Consensus 81 ~~~~~l~~~------------------~--~~-----~~--~~~~~~~~-----------------qi~~~l~~lH---- 112 (279)
T cd06619 81 MDGGSLDVY------------------R--KI-----PE--HVLGRIAV-----------------AVVKGLTYLW---- 112 (279)
T ss_pred CCCCChHHh------------------h--cC-----CH--HHHHHHHH-----------------HHHHHHHHHH----
Confidence 998765310 0 00 00 01111111 1222223332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 113 ----~~~i~H~dlkp~Nill~~~-~~~~l~dfg~~~ 143 (279)
T cd06619 113 ----SLKILHRDVKPSNMLVNTR-GQVKLCDFGVST 143 (279)
T ss_pred ----HCCEeeCCCCHHHEEECCC-CCEEEeeCCcce
Confidence 2358999999999999874 789999999774
No 155
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.81 E-value=0.00011 Score=63.35 Aligned_cols=142 Identities=15% Similarity=0.136 Sum_probs=79.5
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccccc-ChHHHHHHHHHHHhCCCCceEEEEE--CC--e--eEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFF-NRDDEIRTFECMSSQGQGPRLLGRF--GD--G--RVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~--~~--~--~v~ 111 (267)
-+..+..|-.+.+|++.........+..+.+|.......... .-.+|+++++.+...++.+ .++.. .+ . +++
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~-~~~~~~~~~~~~~~lv~ 86 (284)
T cd05081 8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLRLVM 86 (284)
T ss_pred eeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeE-EEEEEccCCCCceEEEE
Confidence 355677777889999874311111356888998754432211 1247888888776544443 33332 22 1 789
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|.++... . +.... . . .......+.. .+...+..|-
T Consensus 87 e~~~~~~L~~~-------l----------~~~~~---~-l-~~~~~~~~~~-----------------~l~~aL~~LH-- 125 (284)
T cd05081 87 EYLPYGSLRDY-------L----------QKHRE---R-L-DHRKLLLYAS-----------------QICKGMEYLG-- 125 (284)
T ss_pred EecCCCCHHHH-------H----------HhcCc---C-C-CHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 99998766421 0 01000 0 0 0111111211 1222233332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 126 ------~~~i~H~dlkp~nili~~~-~~~~l~dfg~~~ 156 (284)
T cd05081 126 ------SKRYVHRDLATRNILVESE-NRVKIGDFGLTK 156 (284)
T ss_pred ------HCCceeccCCHhhEEECCC-CeEEECCCcccc
Confidence 1248999999999999874 678999998765
No 156
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.80 E-value=0.00014 Score=62.06 Aligned_cols=140 Identities=14% Similarity=0.073 Sum_probs=75.4
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~e~ 113 (267)
...+..|..+.+|++..... +.....+.+|....... ...+-.+|..+++.+...++. +.++... ++ +++||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~ 86 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLP-GKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNII-HLEGVVTKSKPVMIVTEY 86 (267)
T ss_pred eeeecccCCCceEEEEEecC-CCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcc-eEEEEEecCCccEEEEEc
Confidence 35567777789999875321 11234677887644321 111124677777776544443 3444443 22 78999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|.++.. .. . .... ... ...+..+..+ +...+..+-
T Consensus 87 ~~~~~L~~-------~~-------~---~~~~----~~~-~~~~~~i~~~-----------------i~~~l~~lH---- 123 (267)
T cd05066 87 MENGSLDA-------FL-------R---KHDG----QFT-VIQLVGMLRG-----------------IASGMKYLS---- 123 (267)
T ss_pred CCCCCHHH-------HH-------H---hcCC----CCC-HHHHHHHHHH-----------------HHHHHHHHH----
Confidence 99875532 11 0 0000 011 1111112111 122223332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.++||+.+.
T Consensus 124 ----~~~i~h~dlkp~nili~~~-~~~~l~dfg~~~ 154 (267)
T cd05066 124 ----DMGYVHRDLAARNILVNSN-LVCKVSDFGLSR 154 (267)
T ss_pred ----HCCEeehhhchhcEEECCC-CeEEeCCCCccc
Confidence 2348999999999999874 678999998764
No 157
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.80 E-value=0.00017 Score=61.24 Aligned_cols=136 Identities=13% Similarity=0.111 Sum_probs=76.6
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc------cccChHHHHHHHHHHHhCCCCceEEEEECC--e--e
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE------VFFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--R 109 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~------~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~ 109 (267)
-..+..|....+|.+.... .+..+.+|....... ......+|+++++.+...++ .++++...+ . +
T Consensus 7 ~~~lg~g~~~~vy~~~~~~----~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~ 81 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVD----TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI-VQYYGCLRDDETLSI 81 (263)
T ss_pred cceecCCCceEEEEEEEcC----CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCe-eeeEEEEccCCeEEE
Confidence 3456777778899997532 357888887643211 01112457777777654444 345554432 1 7
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
+++|++|.++... .. +. . .. + ......+.. .+...+..+.
T Consensus 82 v~e~~~~~~l~~~-------~~-------~~-~-~~-----~--~~~~~~~~~-----------------~l~~~l~~lH 121 (263)
T cd06625 82 FMEYMPGGSVKDQ-------LK-------AY-G-AL-----T--ETVTRKYTR-----------------QILEGVEYLH 121 (263)
T ss_pred EEEECCCCcHHHH-------HH-------Hh-C-CC-----C--HHHHHHHHH-----------------HHHHHHHHHH
Confidence 8999988765320 11 00 0 00 0 011111211 1222233332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 122 --------~~~i~H~dl~p~nilv~~~-~~~~l~dfg~~~ 152 (263)
T cd06625 122 --------SNMIVHRDIKGANILRDSA-GNVKLGDFGASK 152 (263)
T ss_pred --------hCCeecCCCCHHHEEEcCC-CCEEEeecccce
Confidence 2358999999999999874 689999999774
No 158
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.78 E-value=9.8e-05 Score=63.49 Aligned_cols=135 Identities=12% Similarity=0.094 Sum_probs=76.3
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-cc-ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-EV-FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
.+..+..|..+.+|++.... .+..+++|+..... .. .....+|+.+++.+...++ +++++... +. +++|
T Consensus 8 ~~~~lg~g~~~~vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 8 KLERIGKGSFGEVFKGIDNR----TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-TKYYGSYLKGTKLWIIME 82 (277)
T ss_pred hhhhcccCCCeEEEEEEEcc----CCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCE-eeEEEEEEECCEEEEEEe
Confidence 34567777788999997432 35788899875332 11 1122357777666643333 44554433 22 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .. . .... . ...+..+.. .+...++.+.
T Consensus 83 ~~~~~~L~~-------~i-------~---~~~l------~-~~~~~~~~~-----------------~l~~~l~~lh--- 118 (277)
T cd06640 83 YLGGGSALD-------LL-------R---AGPF------D-EFQIATMLK-----------------EILKGLDYLH--- 118 (277)
T ss_pred cCCCCcHHH-------HH-------h---cCCC------C-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 999877532 01 0 0000 0 011111111 1122223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
...++|+|++|+||+++. ++.+.++||..+
T Consensus 119 -----~~~ivH~dl~p~Nil~~~-~~~~~l~dfg~~ 148 (277)
T cd06640 119 -----SEKKIHRDIKAANVLLSE-QGDVKLADFGVA 148 (277)
T ss_pred -----hCCccCcCCChhhEEEcC-CCCEEEcccccc
Confidence 235889999999999987 467999999876
No 159
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.77 E-value=0.00018 Score=64.87 Aligned_cols=141 Identities=16% Similarity=0.130 Sum_probs=83.4
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccChHHHHHHHHHHHhCCCCceEEEEEC--C--e-eEEEeec
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFNRDDEIRTFECMSSQGQGPRLLGRFG--D--G-RVEEFIH 115 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~-~v~e~i~ 115 (267)
.|..|-...+|+....+ +..+.||........ ..+-.+|+.++..+....+.. +++++. + - +|+||++
T Consensus 82 ~ig~Ggfg~VYkG~l~~-----~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~-LlGyC~e~~~~~~LVYEym~ 155 (361)
T KOG1187|consen 82 LIGEGGFGTVYKGVLSD-----GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVK-LLGYCLEGGEHRLLVYEYMP 155 (361)
T ss_pred ceecCCCeEEEEEEECC-----CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCccc-EEEEEecCCceEEEEEEccC
Confidence 35556679999988753 367888865543321 111237888888887444444 566653 2 2 8899998
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
..++.. .||..... + + .|...+. +. -.....+++|-+
T Consensus 156 nGsL~d-----------------~L~~~~~~----~-----L-~W~~R~k-Ia----------~g~A~gL~yLH~----- 192 (361)
T KOG1187|consen 156 NGSLED-----------------HLHGKKGE----P-----L-DWETRLK-IA----------LGAARGLAYLHE----- 192 (361)
T ss_pred CCCHHH-----------------HhCCCCCC----C-----C-CHHHHHH-HH----------HHHHHHHHHHcc-----
Confidence 655542 23332211 1 1 2332221 10 012233444432
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcch
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM 232 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~ 232 (267)
..++.++|+|+++.|||+|++ -...|-||..|..++
T Consensus 193 ~~~~~iiHrDiKssNILLD~~-~~aKlsDFGLa~~~~ 228 (361)
T KOG1187|consen 193 GCPPPIIHRDIKSSNILLDED-FNAKLSDFGLAKLGP 228 (361)
T ss_pred CCCCCEecCCCCHHHeeECCC-CCEEccCccCcccCC
Confidence 344579999999999999974 678999998775554
No 160
>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]
Probab=97.77 E-value=3.1e-05 Score=63.44 Aligned_cols=132 Identities=17% Similarity=0.164 Sum_probs=78.8
Q ss_pred CC-CceEEEEECCeeEEEeecCCCCCcc---cCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcc
Q 024452 96 GQ-GPRLLGRFGDGRVEEFIHARTLSAA---DIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAK 171 (267)
Q Consensus 96 gl-~P~v~~~~~~~~v~e~i~G~~l~~~---~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 171 (267)
|. +.+|+..+.+.+++|+..|...... .=+|..-.+-++++++++|+-.+++++ -...+.+|+..+-+.....
T Consensus 64 G~Gaarvla~d~~alLlEra~~~rsl~~l~~~G~Dd~aTrIac~a~~rlh~Prp~ppp---~L~pL~~wf~sLf~~a~~d 140 (274)
T COG3570 64 GIGAARVLAQDDNALLLERAGGERSLDVLVRDGNDDAATRIACEALARLHAPRPSPPP---ELLPLERWFESLFRKARQD 140 (274)
T ss_pred cCCcchhhccCccHHHHHhccccchHHHHHHhCCchHHHHHHHHHHHHhhCCCCCCCc---ccccHHHHHHHHHHHHhhc
Confidence 54 3678887666689999988654321 112334566788899999997443222 1223556665442211100
Q ss_pred cccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 172 DAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 172 ~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
..+.-+...+.+.+-..+...++.|||+|.+|||-.+ ...-.+||-- .-+|.++||.|.
T Consensus 141 -------~~i~v~aA~~A~~LL~~p~di~pLHGDlHH~Nild~~-~rGWlvIDPk-gl~Gdrg~D~AN 199 (274)
T COG3570 141 -------GSIYVEAARAAQTLLDTPRDIRPLHGDLHHGNILDGD-RRGWLVIDPK-GLIGDRGFDYAN 199 (274)
T ss_pred -------CCcchhHHHHHHHHhcCccccccCcccccccccccCC-cCceEEEccc-cccCccccchHh
Confidence 0111111112222224577889999999999999543 2357799976 456999999775
No 161
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.77 E-value=0.00012 Score=65.50 Aligned_cols=138 Identities=15% Similarity=0.094 Sum_probs=78.4
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---cccc-ChHHHHHHHHHHHhCCCCceEEEEECC-e---eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFF-NRDDEIRTFECMSSQGQGPRLLGRFGD-G---RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v 110 (267)
-+..|..|....||++..... ....+.+|...... .... ...+|..+++.+..-++. ++++.+.+ + ++
T Consensus 34 ~~~~ig~G~~g~Vy~a~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv-~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 34 FIRTLGTGSFGRVILATYKNE---DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCV-NLYGSFKDESYLYLV 109 (340)
T ss_pred EEEEEeecCCeEEEEEEEECC---CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCc-ceEEEEEeCCEEEEE
Confidence 467778888899999975321 23578888764321 1111 113677888777544443 45554432 2 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. .. . ... . .. ......+.. .+...+..+.
T Consensus 110 ~Ey~~~g~L~~-------~i-------~---~~~----~-~~-~~~~~~~~~-----------------qi~~aL~~LH- 148 (340)
T PTZ00426 110 LEFVIGGEFFT-------FL-------R---RNK----R-FP-NDVGCFYAA-----------------QIVLIFEYLQ- 148 (340)
T ss_pred EeCCCCCcHHH-------HH-------H---HcC----C-CC-HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 99998865531 01 0 000 0 00 011111211 1222333332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+|||+++ ++.+.|+||..|.
T Consensus 149 -------~~~ivHrDLkp~NILl~~-~~~ikL~DFG~a~ 179 (340)
T PTZ00426 149 -------SLNIVYRDLKPENLLLDK-DGFIKMTDFGFAK 179 (340)
T ss_pred -------HCCeEccCCCHHHEEECC-CCCEEEecCCCCe
Confidence 235999999999999987 4689999999875
No 162
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=97.76 E-value=0.00016 Score=63.94 Aligned_cols=29 Identities=21% Similarity=0.150 Sum_probs=25.7
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 116 ~ivHrDlkp~Nili~~~-~~~kl~Dfg~a~ 144 (330)
T cd05586 116 DIVYRDLKPENILLDAT-GHIALCDFGLSK 144 (330)
T ss_pred CeEeccCCHHHeEECCC-CCEEEecCCcCc
Confidence 49999999999999874 689999999775
No 163
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.76 E-value=0.00013 Score=61.19 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=77.8
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccC-hHHHHHHHHHHHhCCCCceEEEEE-C---Ce--eE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFN-RDDEIRTFECMSSQGQGPRLLGRF-G---DG--RV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~d-r~~E~~~~~~l~~~gl~P~v~~~~-~---~~--~v 110 (267)
.+.+..|-...+|++.... .+..+++|+...... ...+ -.+|+.+++.+...++.+ ++... . +. ++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~~~lv 79 (260)
T cd06606 5 GELLGRGSFGSVYLALDKD----TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVR-YYGSERDEEKNTLNIF 79 (260)
T ss_pred eeEeeecCceEEEEEEECC----CCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEee-EEEEEecCCCCeEEEE
Confidence 3556777788999997643 357888888754331 1111 146777777777544443 33332 2 22 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|++|.++.. .+.+.. + .+ ......+.. .+...+..+.+
T Consensus 80 ~e~~~~~~L~~--------------~~~~~~----~----~~-~~~~~~~~~-----------------~l~~~l~~lh~ 119 (260)
T cd06606 80 LEYVSGGSLSS--------------LLKKFG----K----LP-EPVIRKYTR-----------------QILEGLAYLHS 119 (260)
T ss_pred EEecCCCcHHH--------------HHHHcC----C----CC-HHHHHHHHH-----------------HHHHHHHHHHH
Confidence 89988765431 111110 0 01 011111211 11222233321
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|++|.||++++ ++.+.|+||..+..
T Consensus 120 --------~~~~h~dl~p~ni~i~~-~~~~~l~d~~~~~~ 150 (260)
T cd06606 120 --------NGIVHRDIKGANILVDS-DGVVKLADFGCAKR 150 (260)
T ss_pred --------CCccccCCCHHHEEEcC-CCCEEEcccccEEe
Confidence 35899999999999997 47899999987754
No 164
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.75 E-value=0.00016 Score=62.68 Aligned_cols=138 Identities=12% Similarity=0.070 Sum_probs=77.6
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-c-ccChHHHHHHHHHHHhCCCCceEEEEECC--e--eEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-V-FFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RVE 111 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~ 111 (267)
..+..|..|....||++.... .+..+.+|....... . .....+|.++++.+...++ .+++....+ . +++
T Consensus 8 ~~~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 8 VKLDKLGEGTYATVFKGRSKL----TENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANI-VTLHDIIHTERCLTLVF 82 (288)
T ss_pred eEeeEEecCCCEEEEEEEECC----CCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCE-eeEEEEEcCCCeEEEEE
Confidence 346777888889999997543 357888887643221 1 1112378888887754443 345544432 2 788
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||++| .+.. .+. ... . .........+.. .+...+..|-
T Consensus 83 e~~~~-~l~~--------------~l~---~~~---~--~~~~~~~~~~~~-----------------qi~~aL~~LH-- 120 (288)
T cd07871 83 EYLDS-DLKQ--------------YLD---NCG---N--LMSMHNVKIFMF-----------------QLLRGLSYCH-- 120 (288)
T ss_pred eCCCc-CHHH--------------HHH---hcC---C--CCCHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 98876 2211 010 000 0 000111222221 1222233332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++++ +.+.|+||..|.
T Consensus 121 ------~~~ivH~dlkp~Nil~~~~-~~~kl~DfG~~~ 151 (288)
T cd07871 121 ------KRKILHRDLKPQNLLINEK-GELKLADFGLAR 151 (288)
T ss_pred ------hCCcccCCCCHHHEEECCC-CCEEECcCccee
Confidence 2358999999999999874 689999998764
No 165
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.75 E-value=0.00027 Score=59.43 Aligned_cols=141 Identities=12% Similarity=0.121 Sum_probs=77.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--c-ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--V-FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
...+..|....+|++.... ++..+++|....... . ......|.++++.+..-++ .+++.... +. ++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~-~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKS----DGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNI-IKYYESFEEKGKLCIVME 79 (258)
T ss_pred EeeeccCCCeEEEEEEEcC----CCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCCh-hheEEEEecCCEEEEEEE
Confidence 3556677778999998643 357888888754321 1 1112367777777763333 33343332 22 7899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .+.+.+. .... .. ...+..+.. .+...+..+.+
T Consensus 80 ~~~~~~L~~--------------~l~~~~~---~~~~-~~-~~~~~~i~~-----------------~i~~~l~~lh~-- 121 (258)
T cd08215 80 YADGGDLSQ--------------KIKKQKK---EGKP-FP-EEQILDWFV-----------------QLCLALKYLHS-- 121 (258)
T ss_pred ecCCCcHHH--------------HHHHhhc---cCCC-cC-HHHHHHHHH-----------------HHHHHHHHHHh--
Confidence 998876532 1111000 0000 00 111111211 12222233322
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|++++||++++ ++.+.|+||+.+..
T Consensus 122 ------~~~~H~dl~~~nil~~~-~~~~~l~d~~~~~~ 152 (258)
T cd08215 122 ------RKILHRDIKPQNIFLTS-NGLVKLGDFGISKV 152 (258)
T ss_pred ------CCEecccCChHHeEEcC-CCcEEECCccceee
Confidence 26899999999999997 46899999988754
No 166
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.74 E-value=0.00031 Score=59.79 Aligned_cols=141 Identities=14% Similarity=0.088 Sum_probs=76.0
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~ 111 (267)
.+.+..|..+.+|++.... ++..+++|...... ....+..+|+.+++.+..-++. ++++.+ .+. +++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLL----DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVI-KYLDSFIEDNELNIVL 81 (267)
T ss_pred eeeeccCCCeeEEEEEEeC----CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCccee-eeeeeEEECCeEEEEE
Confidence 4456777788999998543 35788888653211 1111224677777777544433 334332 222 889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|.++.. ... .+.. ... .-....+..+.. .+...+..+.
T Consensus 82 e~~~~~~L~~-------~~~----~~~~-------~~~-~~~~~~~~~~~~-----------------~i~~~l~~LH-- 123 (267)
T cd08228 82 ELADAGDLSQ-------MIK----YFKK-------QKR-LIPERTVWKYFV-----------------QLCSAVEHMH-- 123 (267)
T ss_pred EecCCCcHHH-------HHH----Hhhh-------ccC-CCCHHHHHHHHH-----------------HHHHHHHHHh--
Confidence 9998765431 111 0000 000 000111111211 1122222222
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|.||+++.+ +.+.++||+.+..
T Consensus 124 ------~~~i~H~dl~~~nil~~~~-~~~~l~d~g~~~~ 155 (267)
T cd08228 124 ------SRRVMHRDIKPANVFITAT-GVVKLGDLGLGRF 155 (267)
T ss_pred ------hCCeeCCCCCHHHEEEcCC-CCEEECcccccee
Confidence 2358999999999999874 6799999997653
No 167
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.74 E-value=0.0002 Score=61.52 Aligned_cols=143 Identities=20% Similarity=0.196 Sum_probs=74.6
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-cc-ChHHHHHHHHHHHhCCCCceEEEEECC---eeEEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FF-NRDDEIRTFECMSSQGQGPRLLGRFGD---GRVEE 112 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~---~~v~e 112 (267)
-.++.|..|....+|+++....+......+.+|+....... .. .-.+|..+++.+.... .+++++.+.. .++++
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~l~~~ 88 (279)
T cd05109 10 KKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPY-VCRLLGICLTSTVQLVTQ 88 (279)
T ss_pred eeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCC-CceEEEEEcCCCcEEEEE
Confidence 34667788888999999754211000124778876543211 11 1124555555443322 3445555432 27888
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .. +... . ... ......|..+ +...+..+.
T Consensus 89 ~~~~g~l~~-------~l----------~~~~--~--~~~-~~~~~~~~~q-----------------i~~~L~~lH--- 126 (279)
T cd05109 89 LMPYGCLLD-------YV----------RENK--D--RIG-SQDLLNWCVQ-----------------IAKGMSYLE--- 126 (279)
T ss_pred cCCCCCHHH-------HH----------hhcc--C--CCC-HHHHHHHHHH-----------------HHHHHHHHH---
Confidence 888755421 01 1100 0 011 1112222211 222223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.|+||..+.
T Consensus 127 -----~~~iiH~dlkp~Nil~~~~-~~~kL~dfG~~~ 157 (279)
T cd05109 127 -----EVRLVHRDLAARNVLVKSP-NHVKITDFGLAR 157 (279)
T ss_pred -----HCCeeccccccceEEEcCC-CcEEECCCCcee
Confidence 2348999999999999864 679999998764
No 168
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.74 E-value=0.00017 Score=61.85 Aligned_cols=135 Identities=12% Similarity=0.165 Sum_probs=76.2
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-ccc-ChHHHHHHHHHHHh--CCCCceEEEEECCe----eEEE
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VFF-NRDDEIRTFECMSS--QGQGPRLLGRFGDG----RVEE 112 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~~-dr~~E~~~~~~l~~--~gl~P~v~~~~~~~----~v~e 112 (267)
..+..|..+.+|++.... .+..+++|....... ... .-.+|..+++.+.. +.-..++++.+.++ ++++
T Consensus 7 ~~l~~g~~g~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVP----TGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hheeccCCceEEEEEEcC----CCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 456677788999987542 357889998654321 111 12467777777763 22223344443322 7899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .+.. + .. . ......+.. .+...+..+.
T Consensus 83 ~~~~~~L~~--------------~~~~-~--~l------~-~~~~~~i~~-----------------~i~~~l~~lh--- 118 (277)
T cd06917 83 YAEGGSVRT--------------LMKA-G--PI------A-EKYISVIIR-----------------EVLVALKYIH--- 118 (277)
T ss_pred cCCCCcHHH--------------HHHc-c--CC------C-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 998865521 0100 0 00 0 111111111 1222223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|+.|.||++++ .+.+.++||+.+.
T Consensus 119 -----~~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~ 149 (277)
T cd06917 119 -----KVGVIHRDIKAANILVTN-TGNVKLCDFGVAA 149 (277)
T ss_pred -----hCCcccCCcCHHHEEEcC-CCCEEEccCCcee
Confidence 235899999999999997 4689999998664
No 169
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.74 E-value=0.00041 Score=60.80 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=79.1
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc---cc-ChHHHHHHHHHHHhCCCCceEEEEECCe----eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV---FF-NRDDEIRTFECMSSQGQGPRLLGRFGDG----RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~---~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~ 111 (267)
...+..|..+.+|++.... .+..+++|........ .. ....|+++++.+...++ +++++...++ +++
T Consensus 6 ~~~ig~g~~g~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKG----TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFL-PTLYASFQTETYLCLVM 80 (316)
T ss_pred eeeecCCccEEEEEEEEcC----CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCc-hhheeeeecCCEEEEEE
Confidence 4567778788999998643 3578999987543211 11 11357777777764343 4445554322 889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|.++... +. .. +....+. .....+.. .+...+..+-
T Consensus 81 e~~~~~~L~~~--------------~~---~~--~~~~l~~--~~~~~~~~-----------------qi~~~l~~lH-- 120 (316)
T cd05574 81 DYCPGGELFRL--------------LQ---RQ--PGKCLSE--EVARFYAA-----------------EVLLALEYLH-- 120 (316)
T ss_pred EecCCCCHHHH--------------HH---hC--CCCccCH--HHHHHHHH-----------------HHHHHHHHHH--
Confidence 99998765320 10 00 0000000 11111211 1222223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 121 ------~~~i~H~dlkp~Nili~~~-~~~~l~dfg~~~ 151 (316)
T cd05574 121 ------LLGIVYRDLKPENILLHES-GHIMLSDFDLSK 151 (316)
T ss_pred ------HCCeeccCCChHHeEEcCC-CCEEEeecchhh
Confidence 1348999999999999874 689999999875
No 170
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.74 E-value=0.00024 Score=61.22 Aligned_cols=136 Identities=17% Similarity=0.141 Sum_probs=75.9
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEeec
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFIH 115 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i~ 115 (267)
..|..|....+|++.... .+..+.+|........ .....+|+++++.+...++. +++..+. +. ++++|++
T Consensus 11 ~~lg~g~~g~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii-~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 11 GELGDGAFGKVYKAQNKE----TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV-KLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred hhcccCCCeEEEEEEECC----CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCee-eEEEEEeeCCEEEEEEEecC
Confidence 346677788999997543 2466777776543221 11223677777777544443 3444332 22 8899998
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|..+... . ++...+. .......+..+ +...+..|-+
T Consensus 86 ~~~l~~~-------~----------~~~~~~l-----~~~~~~~~~~q-----------------i~~~L~~LH~----- 121 (282)
T cd06643 86 GGAVDAV-------M----------LELERPL-----TEPQIRVVCKQ-----------------TLEALNYLHE----- 121 (282)
T ss_pred CCcHHHH-------H----------HhcCCCC-----CHHHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 8665320 0 1101100 01112222211 1222233321
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++.+ +.+.++||..+.
T Consensus 122 ---~~i~H~dlkp~nili~~~-~~~kl~dfg~~~ 151 (282)
T cd06643 122 ---NKIIHRDLKAGNILFTLD-GDIKLADFGVSA 151 (282)
T ss_pred ---CCeeecCCCcccEEEccC-CCEEEccccccc
Confidence 258999999999999874 689999998774
No 171
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.73 E-value=4.5e-05 Score=67.20 Aligned_cols=140 Identities=14% Similarity=0.150 Sum_probs=79.6
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccccc--ChHHHHHHHHHHHhCCCCceEEEEEC-Ce----eE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFF--NRDDEIRTFECMSSQGQGPRLLGRFG-DG----RV 110 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~--dr~~E~~~~~~l~~~gl~P~v~~~~~-~~----~v 110 (267)
-++..|..|....||+|.... .+.-|.+|.-.-..+..+ ...+|+++++.. +.-..-.-|+.+. ++ ++
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~----t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKP----TGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcC----CCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEee
Confidence 356777899999999998764 246666775422221111 113677766655 3322233344332 22 77
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
|||++|..+.. +...+++ . +. ..+.+.. ..+.+-+.+|.
T Consensus 157 mEYMDgGSLd~-------~~k~~g~---------i-----~E--~~L~~ia-----------------~~VL~GL~YLh- 195 (364)
T KOG0581|consen 157 MEYMDGGSLDD-------ILKRVGR---------I-----PE--PVLGKIA-----------------RAVLRGLSYLH- 195 (364)
T ss_pred hhhcCCCCHHH-------HHhhcCC---------C-----CH--HHHHHHH-----------------HHHHHHHHHHh-
Confidence 99999977752 2221110 1 10 0111111 11222233343
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
....++|+|++|.|||++. .|+|.|-||.-++.
T Consensus 196 ------~~~~IIHRDIKPsNlLvNs-kGeVKicDFGVS~~ 228 (364)
T KOG0581|consen 196 ------EERKIIHRDIKPSNLLVNS-KGEVKICDFGVSGI 228 (364)
T ss_pred ------hccCeeeccCCHHHeeecc-CCCEEeccccccHH
Confidence 2255999999999999997 58999999997764
No 172
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.73 E-value=0.00025 Score=62.30 Aligned_cols=142 Identities=17% Similarity=0.174 Sum_probs=76.7
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cc-cChHHHHHHHHHHHhCCCCceEEEEECC---eeEEEe
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VF-FNRDDEIRTFECMSSQGQGPRLLGRFGD---GRVEEF 113 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~---~~v~e~ 113 (267)
.+..|..|....||++............+.+|....... .. .....|..+++.+...++. ++++.... ..+++|
T Consensus 11 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~g~~~~~~~~~v~e~ 89 (316)
T cd05108 11 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC-RLLGICLTSTVQLITQL 89 (316)
T ss_pred eeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCC-eEEEEEcCCCceeeeec
Confidence 456677787889999975321111123578888654321 11 1113566777766544443 45555432 277888
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
+++..+.. . ++.... ... ...+..|.. .+...++.|-
T Consensus 90 ~~~g~l~~-------~----------l~~~~~----~~~-~~~~~~~~~-----------------qi~~~L~~LH---- 126 (316)
T cd05108 90 MPFGCLLD-------Y----------VREHKD----NIG-SQYLLNWCV-----------------QIAKGMNYLE---- 126 (316)
T ss_pred CCCCCHHH-------H----------HHhccc----cCC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 87654421 0 111000 001 111112221 1222233332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 127 ----~~~iiH~dlkp~Nill~~~-~~~kl~DfG~a~ 157 (316)
T cd05108 127 ----ERRLVHRDLAARNVLVKTP-QHVKITDFGLAK 157 (316)
T ss_pred ----hcCeeccccchhheEecCC-CcEEEccccccc
Confidence 2348999999999999874 679999998875
No 173
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.73 E-value=0.00017 Score=60.81 Aligned_cols=140 Identities=14% Similarity=0.046 Sum_probs=77.1
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--cccc-ChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVFF-NRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~ 111 (267)
....+..|....+|++.... .+..+++|...... .... .-..|+.+++.+..-++. +++.... +. +|+
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~-~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKA----DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNII-EYYENFLEDKALMIVM 78 (256)
T ss_pred EEEEecccCceEEEEEEEcC----CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchh-heeeeEecCCEEEEEE
Confidence 35667778788999987543 35788888764321 1111 113577777777543333 3444332 22 889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|.++.. ... +.+. . .-....+..+.. .+.+.+..+.
T Consensus 79 e~~~~~~L~~-------~~~-------~~~~-----~--~~~~~~~~~~~~-----------------~i~~~l~~lh-- 118 (256)
T cd08220 79 EYAPGGTLAE-------YIQ-------KRCN-----S--LLDEDTILHFFV-----------------QILLALHHVH-- 118 (256)
T ss_pred ecCCCCCHHH-------HHH-------Hhcc-----c--CCCHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9999876532 111 0000 0 000111111211 1222223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++++.+.+.||+.+.
T Consensus 119 ------~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~ 150 (256)
T cd08220 119 ------TKLILHRDLKTQNILLDKHKMVVKIGDFGISK 150 (256)
T ss_pred ------hCCeecCCCCHHHEEEcCCCCEEEEccCCCce
Confidence 23589999999999998654457899999875
No 174
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.73 E-value=0.00029 Score=61.69 Aligned_cols=138 Identities=14% Similarity=0.124 Sum_probs=77.6
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cccC-hHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VFFN-RDDEIRTFECMSSQGQGPRLLGRFG-DG---RVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~e 112 (267)
....|..|....+|++.... .+..+.+|....... .... ..+|+++++.+..-++ .++++.+. ++ +++|
T Consensus 5 ~~~~lg~G~~g~v~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 5 KLGELGAGNGGVVTKVLHRP----SGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYI-VGFYGAFYSDGEISICME 79 (308)
T ss_pred EEeeccCCCCeEEEEEEEcC----CCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCC-CeEEEEEeeCCEEEEEee
Confidence 35566777778999997543 246677777654321 1111 2368888877754343 34444432 22 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. ... +-. .. +. .....+.. .+.+.+..|.+
T Consensus 80 y~~~~~L~~-------~l~-------~~~--~~-----~~--~~~~~~~~-----------------~i~~~l~~lH~-- 117 (308)
T cd06615 80 HMDGGSLDQ-------VLK-------KAG--RI-----PE--NILGKISI-----------------AVLRGLTYLRE-- 117 (308)
T ss_pred ccCCCcHHH-------HHH-------hcC--CC-----CH--HHHHHHHH-----------------HHHHHHHHHHh--
Confidence 999876632 110 000 00 10 11111211 12223333332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.++||..+.
T Consensus 118 -----~~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~ 148 (308)
T cd06615 118 -----KHKIMHRDVKPSNILVNSR-GEIKLCDFGVSG 148 (308)
T ss_pred -----hCCEEECCCChHHEEEecC-CcEEEccCCCcc
Confidence 1248999999999999874 679999998664
No 175
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.73 E-value=0.00016 Score=64.08 Aligned_cols=135 Identities=16% Similarity=0.168 Sum_probs=78.0
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccC-hHHHHHHHHHHHhCCCCceEEEEECC--e--eEEEe
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFN-RDDEIRTFECMSSQGQGPRLLGRFGD--G--RVEEF 113 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e~ 113 (267)
.|..|..+.||++.... .+..+.+|+..... ....+ ...|..+++.+..+...+.++..+.+ . +|+||
T Consensus 2 ~lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 77 (327)
T cd05617 2 VIGRGSYAKVLLVRLKK----NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEY 77 (327)
T ss_pred eeeeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 35677788999998643 35778888875421 11111 13566777666665555566665432 2 88999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|..+.. .+.+ .... + ......+.. .+...+..+-+
T Consensus 78 ~~~~~L~~--------------~~~~--~~~l-----~--~~~~~~~~~-----------------qi~~al~~lH~--- 114 (327)
T cd05617 78 VNGGDLMF--------------HMQR--QRKL-----P--EEHARFYAA-----------------EICIALNFLHE--- 114 (327)
T ss_pred CCCCcHHH--------------HHHH--cCCC-----C--HHHHHHHHH-----------------HHHHHHHHHHH---
Confidence 99866531 0000 0000 0 111112221 12223333322
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 115 -----~~ivHrDlkp~Nili~~~-~~~kl~Dfg~~~ 144 (327)
T cd05617 115 -----RGIIYRDLKLDNVLLDAD-GHIKLTDYGMCK 144 (327)
T ss_pred -----CCeeccCCCHHHEEEeCC-CCEEEeccccce
Confidence 358999999999999874 679999998764
No 176
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=97.72 E-value=0.0003 Score=60.75 Aligned_cols=29 Identities=24% Similarity=0.148 Sum_probs=25.1
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|+||+++++ +.+.++||..+.
T Consensus 117 ~ivH~dikp~Nil~~~~-~~~~l~dfg~~~ 145 (279)
T cd05633 117 FVVYRDLKPANILLDEH-GHVRISDLGLAC 145 (279)
T ss_pred CcCCCCCCHHHEEECCC-CCEEEccCCcce
Confidence 38999999999999874 689999999773
No 177
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.72 E-value=0.00024 Score=61.29 Aligned_cols=137 Identities=14% Similarity=0.125 Sum_probs=76.8
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEEEeec
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVEEFIH 115 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~e~i~ 115 (267)
...+..|....+|++.... .+..+++|..............|+..++.+...++. +.+..+ .+. ++++|++
T Consensus 24 ~~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e~~~ 98 (286)
T cd06614 24 LEKIGEGASGEVYKATDRA----TGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIV-DYYDSYLVGDELWVVMEYMD 98 (286)
T ss_pred hHhccCCCCeEEEEEEEcc----CCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCee-EEEEEEEECCEEEEEEeccC
Confidence 3456777778899998643 357889998754432111123677777777554433 333332 222 8899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++.. .... |... .+. .....+. ..+...+..+.
T Consensus 99 ~~~L~~-------~l~~--------~~~~------l~~-~~~~~i~-----------------~~i~~~L~~lH------ 133 (286)
T cd06614 99 GGSLTD-------IITQ--------NFVR------MNE-PQIAYVC-----------------REVLQGLEYLH------ 133 (286)
T ss_pred CCcHHH-------HHHH--------hccC------CCH-HHHHHHH-----------------HHHHHHHHHHH------
Confidence 866642 1110 1100 010 0011111 11122222332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||+.+.
T Consensus 134 --~~gi~H~dl~p~ni~i~~~-~~~~l~d~~~~~ 164 (286)
T cd06614 134 --SQNVIHRDIKSDNILLSKD-GSVKLADFGFAA 164 (286)
T ss_pred --hCCeeeCCCChhhEEEcCC-CCEEECccchhh
Confidence 1458999999999999974 689999998664
No 178
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.72 E-value=0.00018 Score=65.18 Aligned_cols=138 Identities=15% Similarity=0.101 Sum_probs=79.8
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccc-cChHHHHHHHHHHHhCCCCceEEEEECC--e--e
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVF-FNRDDEIRTFECMSSQGQGPRLLGRFGD--G--R 109 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~ 109 (267)
..+..|..|..+.||++.... .+..|.+|+..... ... .....|..+++.+.... .+++++.+.+ . +
T Consensus 4 ~~~~~LG~G~~g~Vy~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~-iv~l~~~~~~~~~~~l 78 (381)
T cd05626 4 VKIKTLGIGAFGEVCLACKVD----THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEW-VVKLYYSFQDKDNLYF 78 (381)
T ss_pred eEEEEEeecCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCC-eeeeEEEEecCCEEEE
Confidence 357778888899999997543 35788999864321 111 11135777776664333 3445555432 2 7
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
|+||++|..+.. .+.+... . + ......|..+ +...++.+-
T Consensus 79 v~E~~~gg~L~~--------------~l~~~~~--~-----~--e~~~~~~~~q-----------------i~~aL~~LH 118 (381)
T cd05626 79 VMDYIPGGDMMS--------------LLIRMEV--F-----P--EVLARFYIAE-----------------LTLAIESVH 118 (381)
T ss_pred EEecCCCCcHHH--------------HHHhcCC--C-----C--HHHHHHHHHH-----------------HHHHHHHHH
Confidence 899999865421 1111000 0 1 0112222221 222223332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++. ++.+.|+||..|.
T Consensus 119 --------~~givHrDlKp~Nili~~-~~~~kL~DFGl~~ 149 (381)
T cd05626 119 --------KMGFIHRDIKPDNILIDL-DGHIKLTDFGLCT 149 (381)
T ss_pred --------hCCeeecCCcHHHEEECC-CCCEEEeeCcCCc
Confidence 235899999999999987 4689999999864
No 179
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=97.72 E-value=0.00027 Score=64.00 Aligned_cols=138 Identities=16% Similarity=0.150 Sum_probs=79.7
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEECC--e--e
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--R 109 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~ 109 (267)
..+..|..|....||++.... .+..+.+|+..... .......+|..+++.+....+ .+++..+.+ . +
T Consensus 4 ~~~~~LG~G~~g~Vy~a~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~i-v~~~~~~~~~~~~~l 78 (382)
T cd05625 4 VKIKTLGIGAFGEVCLARKVD----TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWV-VRLYYSFQDKDNLYF 78 (382)
T ss_pred EEEEEEEeCCCEEEEEEEECC----CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcC-CeEEEEEEeCCEEEE
Confidence 357778888889999997543 35778888765321 011112357777776644333 445554432 2 8
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
|+||++|..+.. .+.+ ... .+ ......|..+ +...++.+-
T Consensus 79 v~E~~~gg~L~~--------------~l~~---~~~----~~--e~~~~~~~~q-----------------i~~al~~lH 118 (382)
T cd05625 79 VMDYIPGGDMMS--------------LLIR---MGI----FP--EDLARFYIAE-----------------LTCAVESVH 118 (382)
T ss_pred EEeCCCCCcHHH--------------HHHh---cCC----CC--HHHHHHHHHH-----------------HHHHHHHHH
Confidence 899999865421 1111 000 00 1112222222 122223332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 119 --------~~~ivHrDlKp~NILl~~~-g~~kL~DFGla~ 149 (382)
T cd05625 119 --------KMGFIHRDIKPDNILIDRD-GHIKLTDFGLCT 149 (382)
T ss_pred --------hCCeecCCCCHHHEEECCC-CCEEEeECCCCc
Confidence 1248999999999999874 689999999864
No 180
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.72 E-value=0.00026 Score=62.78 Aligned_cols=81 Identities=19% Similarity=0.157 Sum_probs=48.0
Q ss_pred EEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEEC--Ce---eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG---RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~---~v~ 111 (267)
...|..|..+.||++...... ...+..+.+|+...... ......+|+.++..+.++.-..++++.+. ++ +++
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV 91 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence 456788888999998642100 11245688887654321 11112468888888855543345555432 22 789
Q ss_pred EeecCCCCC
Q 024452 112 EFIHARTLS 120 (267)
Q Consensus 112 e~i~G~~l~ 120 (267)
+|++|..+.
T Consensus 92 ey~~~g~L~ 100 (338)
T cd05102 92 EFCKYGNLS 100 (338)
T ss_pred ecCCCCcHH
Confidence 999987764
No 181
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.72 E-value=0.00014 Score=61.50 Aligned_cols=138 Identities=17% Similarity=0.159 Sum_probs=76.1
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-ccc-ChHHHHHHHHHHHhCCCCceEEEEECCe---eEEEeecCC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VFF-NRDDEIRTFECMSSQGQGPRLLGRFGDG---RVEEFIHAR 117 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~~---~v~e~i~G~ 117 (267)
|..|..+.+|++..... ++....+.+|....... ... +..+|..+++.+...++. ++++...+. +++||.+|.
T Consensus 3 ig~g~~~~v~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05040 3 LGDGSFGVVRRGEWSTS-GGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLI-RLYGVVLTHPLMMVTELAPLG 80 (257)
T ss_pred CCccCcccEEeeeEecC-CCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCcc-ceeEEEcCCeEEEEEEecCCC
Confidence 56677889999976431 11223578888765433 212 124677887777654443 333333222 788998877
Q ss_pred CCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCC
Q 024452 118 TLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQ 197 (267)
Q Consensus 118 ~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 197 (267)
++... .. .... . .-....+..+..+ +.+.+..+-
T Consensus 81 ~L~~~-------l~----------~~~~--~--~~~~~~~~~~~~q-----------------i~~~L~~lH-------- 114 (257)
T cd05040 81 SLLDR-------LR----------KDAL--G--HFLISTLCDYAVQ-----------------IANGMRYLE-------- 114 (257)
T ss_pred cHHHH-------HH----------hccc--c--cCcHHHHHHHHHH-----------------HHHHHHHHH--------
Confidence 65321 11 0000 0 0011112222211 122223332
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 115 ~~~i~H~di~p~nil~~~~-~~~kl~dfg~~~ 145 (257)
T cd05040 115 SKRFIHRDLAARNILLASD-DKVKIGDFGLMR 145 (257)
T ss_pred hCCccccccCcccEEEecC-CEEEeccccccc
Confidence 1358999999999999974 679999998664
No 182
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=97.71 E-value=4.9e-05 Score=64.99 Aligned_cols=138 Identities=16% Similarity=0.089 Sum_probs=77.3
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEECC--e--eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~ 111 (267)
...|..|..+.+|++.... ++..+.+|+..... ........|.++++.+..+.-.++++..+.+ . +++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKE----TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred eeeecCCCceEEEEEEEcC----CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 4567777788999998643 35788899875421 1011123567777777623222333333322 2 788
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|.+|.++.. .+.+-+. .. ......+..+ +...+..|.
T Consensus 82 e~~~~~~L~~--------------~l~~~~~--------l~-~~~~~~i~~q-----------------l~~~l~~Lh-- 119 (280)
T cd05581 82 EYAPNGELLQ--------------YIRKYGS--------LD-EKCTRFYAAE-----------------ILLALEYLH-- 119 (280)
T ss_pred cCCCCCcHHH--------------HHHHcCC--------CC-HHHHHHHHHH-----------------HHHHHHHHH--
Confidence 9988765531 1111110 00 1112222221 122223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|.||+++++ +.+.++||+.+..
T Consensus 120 ------~~~~~H~dl~~~ni~i~~~-~~~~l~df~~~~~ 151 (280)
T cd05581 120 ------SKGIIHRDLKPENILLDKD-MHIKITDFGTAKV 151 (280)
T ss_pred ------HCCeeecCCCHHHeEECCC-CCEEecCCccccc
Confidence 1349999999999999874 6899999998763
No 183
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.71 E-value=6.7e-05 Score=63.65 Aligned_cols=138 Identities=14% Similarity=0.121 Sum_probs=78.6
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--c-ccc-ChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--E-VFF-NRDDEIRTFECMSSQGQGPRLLGRFG--DG--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~-~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v 110 (267)
-...+..|....+|++.... .+..+.+|+..... . ... ...+|+++++.+..-++.+ ++.... +. ++
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv 78 (258)
T cd05578 4 LLRVIGKGAFGKVCIVQKRD----TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVN-LWYSFQDEENMYLV 78 (258)
T ss_pred EEEEeccCCCceEEEEEEcc----CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHH-HHHhhcCCCeEEEE
Confidence 35567777788999997542 35788999875421 1 111 1246777777775444433 333222 22 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|++|.++.. .+ .+-+ +. . ...+..|..+ +.+.+..+..
T Consensus 79 ~e~~~~~~L~~----------~l----~~~~----~l----~-~~~~~~~~~~-----------------i~~~l~~lh~ 118 (258)
T cd05578 79 VDLLLGGDLRY----------HL----SQKV----KF----S-EEQVKFWICE-----------------IVLALEYLHS 118 (258)
T ss_pred EeCCCCCCHHH----------HH----HhcC----Cc----C-HHHHHHHHHH-----------------HHHHHHHHHh
Confidence 99999876532 01 0000 00 0 1112222221 2223333332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|++|.||+++++ +.+.++||+.+..
T Consensus 119 --------~~i~h~dl~~~nil~~~~-~~~~l~d~~~~~~ 149 (258)
T cd05578 119 --------KGIIHRDIKPDNILLDEQ-GHVHITDFNIATK 149 (258)
T ss_pred --------CCeeccCCCHHHeEEcCC-CCEEEeecccccc
Confidence 248999999999999874 6899999987754
No 184
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.71 E-value=0.00026 Score=61.97 Aligned_cols=138 Identities=12% Similarity=0.071 Sum_probs=77.1
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVE 111 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~ 111 (267)
..+..|..|..+.||++.... .+..+++|....... ......+|+.+++.+...++. +++.... +. +++
T Consensus 9 ~~~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 9 IKLEKLGEGTYATVFKGRSKL----TENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV-TLHDIVHTDKSLTLVF 83 (309)
T ss_pred EEEEEecccCCEEEEEEEecC----CCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcc-eEEEEEeeCCeEEEEE
Confidence 456778888889999997542 346788887643221 111224688888777654443 3444432 22 789
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||++| .+. ..+.+-+. ... ......+.. .+...+..+-
T Consensus 84 e~~~~-~l~--------------~~~~~~~~-------~~~-~~~~~~~~~-----------------qi~~aL~~lH-- 121 (309)
T cd07872 84 EYLDK-DLK--------------QYMDDCGN-------IMS-MHNVKIFLY-----------------QILRGLAYCH-- 121 (309)
T ss_pred eCCCC-CHH--------------HHHHhcCC-------CCC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 98864 111 01111000 001 111221211 1222223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.|+||..+.
T Consensus 122 ------~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~~~ 152 (309)
T cd07872 122 ------RRKVLHRDLKPQNLLINER-GELKLADFGLAR 152 (309)
T ss_pred ------HCCeecCCCCHHHEEECCC-CCEEECccccce
Confidence 2358999999999999874 689999999774
No 185
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=97.70 E-value=0.00023 Score=60.45 Aligned_cols=136 Identities=13% Similarity=0.146 Sum_probs=74.0
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---c-ccChHHHHHHHHHHHhCCCCceEEEEECCe----eEEE
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---V-FFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEE 112 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e 112 (267)
.++..|....+|++.... .+..+++|....... . ..+...|..++.....+.-.++++..+..+ +++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 77 (260)
T cd05611 2 KPISKGAFGSVYLAKKRS----TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVME 77 (260)
T ss_pred ccCCcCCCeeEEEEEecC----CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEe
Confidence 356777788999997532 357888998754211 1 111123333333222333345566555422 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .. .+. . + -.......+..+ +...+..+..
T Consensus 78 ~~~~~~L~~-------~l-------~~~---~-~-----~~~~~~~~i~~q-----------------i~~aL~~lH~-- 115 (260)
T cd05611 78 YLNGGDCAS-------LI-------KTL---G-G-----LPEDWAKQYIAE-----------------VVLGVEDLHQ-- 115 (260)
T ss_pred ccCCCCHHH-------HH-------HHc---C-C-----CCHHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 999877642 11 000 0 0 001112222211 2222233321
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 116 ------~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~ 145 (260)
T cd05611 116 ------RGIIHRDIKPENLLIDQT-GHLKLTDFGLSR 145 (260)
T ss_pred ------CCeecCCCCHHHeEECCC-CcEEEeecccce
Confidence 248999999999999874 679999998654
No 186
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.70 E-value=0.00011 Score=62.04 Aligned_cols=140 Identities=11% Similarity=0.117 Sum_probs=78.0
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~e 112 (267)
...+..|....+|++.... ++..+++|...... .......+|+++++.++..++.+ +++... ++ +++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~-~~~~~~~~~~~~lv~e 79 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKS----DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVT-FFASFQENGRLFIVME 79 (257)
T ss_pred EEEecCCCcceEEEEEEcC----CCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhh-hhheeccCCeEEEEEe
Confidence 4556777788999998653 35778888764321 11111136888887776544433 344332 22 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++... +.+-+.. . -.......|..+ +.+.+..+.
T Consensus 80 ~~~~~~L~~~--------------~~~~~~~-----~--~~~~~~~~~~~~-----------------l~~~l~~lh--- 118 (257)
T cd08225 80 YCDGGDLMKR--------------INRQRGV-----L--FSEDQILSWFVQ-----------------ISLGLKHIH--- 118 (257)
T ss_pred cCCCCcHHHH--------------HHhccCC-----C--CCHHHHHHHHHH-----------------HHHHHHHHH---
Confidence 9987665321 1111110 0 011112222221 122223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|.||++++++..+.++||..+..
T Consensus 119 -----~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (257)
T cd08225 119 -----DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQ 151 (257)
T ss_pred -----HCCcccccCCHHHEEEcCCCCeEEecccccchh
Confidence 224899999999999987534568999987753
No 187
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.70 E-value=0.00038 Score=59.84 Aligned_cols=139 Identities=14% Similarity=0.075 Sum_probs=76.3
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccc-cChHHHHHHHHHHHhCCCCceEEEEECC-e---eEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVF-FNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v~ 111 (267)
-+..|..|..+.+|++.... .+..+++|...... ... ....+|+.+++.+.. .-.+++++...+ . +|+
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 4 KIEKIGEGTYGVVYKGRNKK----TGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH-PNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred EeeEecccCceEEEEEEECC----CCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC-CCEeeeEEEEeeCCeEEEEE
Confidence 34567788889999997543 35788888764321 111 112467888777753 223445544432 1 788
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++| .+.. .+.+... ... . ....+..+..+ +...+..|.
T Consensus 79 e~~~~-~l~~--------------~~~~~~~----~~~-~-~~~~~~~~~~q-----------------i~~~L~~lH-- 118 (285)
T cd07861 79 EFLSM-DLKK--------------YLDSLPK----GQY-M-DAELVKSYLYQ-----------------ILQGILFCH-- 118 (285)
T ss_pred ecCCC-CHHH--------------HHhcCCC----CCc-C-CHHHHHHHHHH-----------------HHHHHHHHH--
Confidence 88875 2210 1111110 000 0 01112222221 222333332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|.||..+.
T Consensus 119 ------~~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~ 149 (285)
T cd07861 119 ------SRRVLHRDLKPQNLLIDNK-GVIKLADFGLAR 149 (285)
T ss_pred ------hCCeeecCCCHHHEEEcCC-CcEEECccccee
Confidence 1248999999999999874 689999998664
No 188
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.70 E-value=0.0002 Score=61.68 Aligned_cols=134 Identities=12% Similarity=0.035 Sum_probs=72.7
Q ss_pred cCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc----ccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeec
Q 024452 44 KGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV----FFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIH 115 (267)
Q Consensus 44 ~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~----~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~ 115 (267)
..|..+.||++.... .+..|.+|........ ......|.++++.+...++. +++..+.+ .+++||++
T Consensus 2 g~G~~g~Vy~~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~-~~~~~~~~~~~~~lv~e~~~ 76 (277)
T cd05607 2 GKGGFGEVCAVQVKN----TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIV-NLAYAFESKTHLCLVMSLMN 76 (277)
T ss_pred CCCCceEEEEEEEcc----CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEE-EEEEEEecCCeEEEEEecCC
Confidence 345567899997543 3578888876432110 00112477888777543333 34433332 28899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++... . +.... ..-....+..+.. .+...++.+-
T Consensus 77 g~~L~~~-------~----------~~~~~----~~~~~~~~~~~~~-----------------qi~~al~~lH------ 112 (277)
T cd05607 77 GGDLKYH-------I----------YNVGE----RGLEMERVIHYSA-----------------QITCGILHLH------ 112 (277)
T ss_pred CCCHHHH-------H----------Hhccc----cCCCHHHHHHHHH-----------------HHHHHHHHHH------
Confidence 8765310 0 00000 0000111111111 1222223332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 113 --~~~ivH~dikp~Nili~~~-~~~~l~Dfg~~~ 143 (277)
T cd05607 113 --SMDIVYRDMKPENVLLDDQ-GNCRLSDLGLAV 143 (277)
T ss_pred --HCCEEEccCChHhEEEcCC-CCEEEeeceeee
Confidence 2348999999999999874 679999998764
No 189
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.69 E-value=0.00032 Score=59.55 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=77.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECCe---eEEEeecC
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDG---RVEEFIHA 116 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~---~v~e~i~G 116 (267)
+..|..|....+|++... ++..+.+|..........+..+|..+++.+...++ .+++....+. ++++|++|
T Consensus 11 ~~~ig~G~~g~v~~~~~~-----~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYN-----GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRL-VRLYAVVTQEPIYIITEYMEN 84 (260)
T ss_pred eeeeccCccceEEeeecC-----CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCe-eeEEEEEccCCcEEEEEcCCC
Confidence 456677878899999743 24789999765433222222478888887764433 3344444322 78898887
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
.++.. .. +... ... .. ......+.. .+...++.|-
T Consensus 85 ~~L~~-------~~----------~~~~--~~~-~~-~~~~~~i~~-----------------~i~~al~~LH------- 119 (260)
T cd05067 85 GSLVD-------FL----------KTPE--GIK-LT-INKLIDMAA-----------------QIAEGMAFIE------- 119 (260)
T ss_pred CCHHH-------HH----------HhcC--CCC-CC-HHHHHHHHH-----------------HHHHHHHHHh-------
Confidence 65531 00 0100 000 01 111111111 1122223331
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 120 -~~~i~H~dl~p~ni~i~~~-~~~~l~dfg~~~ 150 (260)
T cd05067 120 -RKNYIHRDLRAANILVSET-LCCKIADFGLAR 150 (260)
T ss_pred -cCCeecccccHHhEEEcCC-CCEEEccCccee
Confidence 2348999999999999874 679999998774
No 190
>PRK14705 glycogen branching enzyme; Provisional
Probab=97.68 E-value=0.00027 Score=72.13 Aligned_cols=177 Identities=14% Similarity=0.073 Sum_probs=97.7
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCC--CceEEEEE----------C
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQ--GPRLLGRF----------G 106 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl--~P~v~~~~----------~ 106 (267)
.+..+++-.+|++..+. + .+.++++|+++.-.. -+| =|+++.++|.+.|. .|.+++.. .
T Consensus 148 ~~r~l~~EQSNTSvi~g----d--~~~~~ilKlfRrl~~-G~N--PdvE~~r~Lteag~~~vP~llG~ve~~~~~~~~~~ 218 (1224)
T PRK14705 148 SVKVLSGEQSNTSVIVD----D--GDSAAIVKFFRVLSA-GKN--PEVELGAALTAAGTSEVPATLGWVTGEWDGPASNA 218 (1224)
T ss_pred CccccccccCceEEEEC----C--CCccEEEEEeeecCC-CCC--ccHHHHHHHhhCCCccCCCccEEEEEeeccccccc
Confidence 34556777788888882 1 124999999975321 233 37788888888876 47776642 1
Q ss_pred -------C---eeEEEeecCCCC----CcccCC----ChHHHHHHHHHHHhhccCCCCCCCCc----hhHHHHHHHHHHH
Q 024452 107 -------D---GRVEEFIHARTL----SAADIR----DPKISELVAAKMREFHDLKMPGPRKA----LLWDRLRKWVSVA 164 (267)
Q Consensus 107 -------~---~~v~e~i~G~~l----~~~~l~----~~~i~~~la~~La~lH~~~~~~~~~~----~~~~~l~~~~~~~ 164 (267)
. +++++||++..= +-..+. -...++.||+..|.||.........+ ......+.|...+
T Consensus 219 ~~~~~~~~~tLa~lq~fv~n~gDgW~~tl~~l~r~~~f~~~a~~LG~rtAemH~aLA~~~~~~~f~~~~~~~~~~~~~rL 298 (1224)
T PRK14705 219 GATARAVTGELAVAHEFLAGGLDAWRLAVDAAASGKDFTAEARALGAATATVHRRLAETLGTHDGQEQGPDIAAGVARRV 298 (1224)
T ss_pred CCccccCceeHHHHHHhhcCCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCcccccCHHHHHHHHHHHH
Confidence 0 256778875321 000110 02347789999999999743211111 1111134454443
Q ss_pred hhccCccccccc-chhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCC----CCEEEEeecc
Q 024452 165 KSFCSAKDAKEF-CLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEET----SSITIIVSFT 227 (267)
Q Consensus 165 ~~~~~~~~~~~~-~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~----~~v~lIDwE~ 227 (267)
.+.......... ..+.+.+.++.|... ......=||||+|.|.||+.+++ +...|||||-
T Consensus 299 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~---~~~~~~RIHGD~HLGQVL~t~~D~~~~~~~~IIDFEG 363 (1224)
T PRK14705 299 RGSWAEAGPAVGPYDHALDELLSALDGR---NAGQLQRIHGDLHLGQILQVPGAEGQPERWAILDFEG 363 (1224)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHHhcc---CccceEEEecccccccEEEecCCCCccCCEEEEecCC
Confidence 322110000000 112333333333322 22567789999999999997532 3589999995
No 191
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.68 E-value=0.00032 Score=59.16 Aligned_cols=135 Identities=16% Similarity=0.098 Sum_probs=76.9
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeecC
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIHA 116 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~G 116 (267)
..+..|....+|++.... .+..+++|....... ..+..+|+++++.+...++. ++++.+.+ .++++|++|
T Consensus 9 ~~i~~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~-~~~~~~~~~~~~~l~~e~~~~ 82 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKE----TGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIV-KYYGSYFKNTDLWIVMEYCGA 82 (256)
T ss_pred hhhcCCCCeEEEEEEEcC----CCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEe-eeeeeeecCCcEEEEEecCCC
Confidence 345667778999997643 247888998754322 22234788888887443433 34544322 278999888
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
.++.. ... .... . .+ ...+..+.. .+...+..+..
T Consensus 83 ~~L~~-------~l~----------~~~~---~-l~-~~~~~~~~~-----------------~l~~~l~~lh~------ 117 (256)
T cd06612 83 GSVSD-------IMK----------ITNK---T-LT-EEEIAAILY-----------------QTLKGLEYLHS------ 117 (256)
T ss_pred CcHHH-------HHH----------hCcc---C-CC-HHHHHHHHH-----------------HHHHHHHHHHH------
Confidence 66532 110 0000 0 00 111111211 12222233321
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+||+++++ +.+.|.||..+.
T Consensus 118 --~~i~H~dl~~~ni~~~~~-~~~~l~dfg~~~ 147 (256)
T cd06612 118 --NKKIHRDIKAGNILLNEE-GQAKLADFGVSG 147 (256)
T ss_pred --CCcccCCCCcceEEECCC-CcEEEcccccch
Confidence 247999999999999874 679999998665
No 192
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.67 E-value=0.00087 Score=66.92 Aligned_cols=146 Identities=15% Similarity=0.145 Sum_probs=80.0
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---cccCh-HHHHHHHHHHHhCCCCceEEEEEC-C-e--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---VFFNR-DDEIRTFECMSSQGQGPRLLGRFG-D-G--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~~~dr-~~E~~~~~~l~~~gl~P~v~~~~~-~-~--~v 110 (267)
-+..|..|..+.||++.... .+..+.+|....... ....+ .+|+.+++.+...++.+ ++.... + . ++
T Consensus 6 Ii~~LGkGgfG~VYlA~d~~----tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVk-l~~v~~d~~~lyLV 80 (932)
T PRK13184 6 IIRLIGKGGMGEVYLAYDPV----CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVP-VYSICSDGDPVYYT 80 (932)
T ss_pred EEEEEecCCCEEEEEEEECC----CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCe-EEEEEeeCCEEEEE
Confidence 35667778889999997543 357888987654321 11111 36777777776545443 444433 2 2 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccC-CCCCC-CCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDL-KMPGP-RKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISML 188 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~-~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 188 (267)
++|++|.++.. +. ...... ..+.. ........+..+. ..+...++.+
T Consensus 81 MEY~eGGSL~~-------lL-------~s~~~~~~l~e~~~~~lsv~~iL~I~-----------------~QIa~AL~yL 129 (932)
T PRK13184 81 MPYIEGYTLKS-------LL-------KSVWQKESLSKELAEKTSVGAFLSIF-----------------HKICATIEYV 129 (932)
T ss_pred EEcCCCCCHHH-------HH-------HHhhhccccchhhhcccCHHHHHHHH-----------------HHHHHHHHHH
Confidence 99999876642 11 111110 00000 0000001111111 1122222333
Q ss_pred HHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 189 EKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 189 ~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
- ...++|+|++|.||+++.+ +.+.++||..|.
T Consensus 130 H--------s~GIIHRDLKPeNILLd~d-g~vKLiDFGLAk 161 (932)
T PRK13184 130 H--------SKGVLHRDLKPDNILLGLF-GEVVILDWGAAI 161 (932)
T ss_pred H--------HCCccccCCchheEEEcCC-CCEEEEecCcce
Confidence 2 2358999999999999874 679999999775
No 193
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.67 E-value=0.00023 Score=63.22 Aligned_cols=138 Identities=13% Similarity=0.146 Sum_probs=77.5
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cc-cChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VF-FNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~e 112 (267)
..+.|..|....||++.... .+..+.+|+...... .. ....+|+++++.+...++.+ +++.+. ++ ++++
T Consensus 9 ~~~~lg~g~~g~V~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e 83 (333)
T cd06650 9 KISELGAGNGGVVFKVSHKP----SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG-FYGAFYSDGEISICME 83 (333)
T ss_pred eeccccCCCCEEEEEEEECC----CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccc-eeEEEEECCEEEEEEe
Confidence 35566778788999997543 346677776543321 11 11247888888886544443 444432 22 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .. .+ +. .. + ...+..+.. .+...+..+-.
T Consensus 84 ~~~~~~L~~-------~l-------~~-~~-~~-----~--~~~~~~~~~-----------------~l~~~l~~lH~-- 121 (333)
T cd06650 84 HMDGGSLDQ-------VL-------KK-AG-RI-----P--EQILGKVSI-----------------AVIKGLTYLRE-- 121 (333)
T ss_pred cCCCCcHHH-------HH-------HH-cC-CC-----C--HHHHHHHHH-----------------HHHHHHHHHHh--
Confidence 999866532 11 00 00 00 0 011111111 12222233321
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+|||++++ +.+.|+||..+.
T Consensus 122 -----~~~ivH~dlkp~Nili~~~-~~~kL~Dfg~~~ 152 (333)
T cd06650 122 -----KHKIMHRDVKPSNILVNSR-GEIKLCDFGVSG 152 (333)
T ss_pred -----cCCEEecCCChhhEEEcCC-CCEEEeeCCcch
Confidence 1248999999999999874 679999998764
No 194
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.67 E-value=0.00027 Score=61.13 Aligned_cols=80 Identities=13% Similarity=0.069 Sum_probs=46.1
Q ss_pred EEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCccccc-ChHHHHHHHHHHHhCCCCceEEEEECCe----eEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVEVFF-NRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e~ 113 (267)
...+..|..+.+|++...... ...+..+.+|.......... +..+|.++++.+...++ +++++.+..+ ++++|
T Consensus 10 ~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~ 88 (288)
T cd05093 10 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI-VKFYGVCVEGDPLIMVFEY 88 (288)
T ss_pred ccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCc-ceEEEEEecCCccEEEEEc
Confidence 444567778899999742211 11234577777654332211 22468888887754444 4455544322 88999
Q ss_pred ecCCCCC
Q 024452 114 IHARTLS 120 (267)
Q Consensus 114 i~G~~l~ 120 (267)
++|.++.
T Consensus 89 ~~~~~L~ 95 (288)
T cd05093 89 MKHGDLN 95 (288)
T ss_pred CCCCCHH
Confidence 9887663
No 195
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.67 E-value=0.00033 Score=59.19 Aligned_cols=140 Identities=14% Similarity=0.038 Sum_probs=77.6
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCC---cccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEG---VEVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~---~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~ 111 (267)
.+..+..|..+.+|.+.... ++..+++|..... .....+..+|+++++.+...++ .+++..+. +. +++
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTE----DDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI-IAYYNHFMDDNTLLIEM 78 (256)
T ss_pred EeeEecccCCceEEEEEEcC----CCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCe-eEEEeEEecCCeEEEEE
Confidence 45667778778888887543 3578888865422 1111122478888887754343 33444433 22 779
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||++|.++.. .+.+ .. ... .. ...+..+.. .+...+..+.
T Consensus 79 e~~~~~~L~~--------------~~~~---~~--~~~-~~-~~~~~~~~~-----------------~l~~~l~~lh-- 118 (256)
T cd08221 79 EYANGGTLYD--------------KIVR---QK--GQL-FE-EEMVLWYLF-----------------QIVSAVSYIH-- 118 (256)
T ss_pred EecCCCcHHH--------------HHHh---cc--ccC-CC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9998765531 1111 00 000 01 111111211 1222223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|+||+++++ +.+.|.||+.+..
T Consensus 119 ------~~~i~h~dl~p~ni~~~~~-~~~kl~d~~~~~~ 150 (256)
T cd08221 119 ------KAGILHRDIKTLNIFLTKA-GLIKLGDFGISKI 150 (256)
T ss_pred ------hCCccccCCChHhEEEeCC-CCEEECcCcceEE
Confidence 2248999999999999974 6799999997753
No 196
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.66 E-value=0.0011 Score=56.75 Aligned_cols=131 Identities=17% Similarity=0.151 Sum_probs=74.5
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEeecCCC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFIHART 118 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i~G~~ 118 (267)
+..|..+.+|++.... .+..+++|+..... .. ..|......+.++.-.++++..+. +. +|+||++|.+
T Consensus 24 lg~g~~g~v~~~~~~~----~~~~~~~k~~~~~~--~~--~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 95 (267)
T PHA03390 24 LIDGKFGKVSVLKHKP----TQKLFVQKIIKAKN--FN--AIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGD 95 (267)
T ss_pred ecCCCceEEEEEEEcC----CCcEEEEEEEehhh--cc--hhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCc
Confidence 6788889999997543 35789999875431 11 124444444444444456665543 22 8899999865
Q ss_pred CCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCc
Q 024452 119 LSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQE 198 (267)
Q Consensus 119 l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~ 198 (267)
+.. .+ +... + -....+..+..+ +...+..+-+
T Consensus 96 L~~----------~l-------~~~~-~-----l~~~~~~~~~~q-----------------i~~~l~~lH~-------- 127 (267)
T PHA03390 96 LFD----------LL-------KKEG-K-----LSEAEVKKIIRQ-----------------LVEALNDLHK-------- 127 (267)
T ss_pred HHH----------HH-------HhcC-C-----CCHHHHHHHHHH-----------------HHHHHHHHHh--------
Confidence 532 01 0000 0 001122222221 1222233321
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++.+++.+.++||+.+.
T Consensus 128 ~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 128 HNIIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred CCeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 2389999999999999753379999998663
No 197
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.66 E-value=0.00045 Score=59.34 Aligned_cols=136 Identities=12% Similarity=0.080 Sum_probs=74.8
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-cccc-ChHHHHHHHHHHHhCCCCceEEEEEC-C---eeEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-EVFF-NRDDEIRTFECMSSQGQGPRLLGRFG-D---GRVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~-~---~~v~e 112 (267)
.+..|..|..+.+|++.... .+..+.+|+..... .... +-.+|+.+++.+...++. ++++... + .+|+|
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNR----TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT-KYYGSYLKDTKLWIIME 82 (277)
T ss_pred hheeEeecCCeEEEEEEECC----CCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEe-EEEEEEEeCCeEEEEEE
Confidence 34567778788999986432 35788899865322 1111 113566666666443333 3343332 2 28899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .. +... .+ ......+.. .+...+..+
T Consensus 83 ~~~~~~l~~-------~i----------~~~~------~~-~~~~~~~~~-----------------~l~~~l~~l---- 117 (277)
T cd06641 83 YLGGGSALD-------LL----------EPGP------LD-ETQIATILR-----------------EILKGLDYL---- 117 (277)
T ss_pred eCCCCcHHH-------HH----------hcCC------CC-HHHHHHHHH-----------------HHHHHHHHH----
Confidence 998865532 01 0100 01 111111111 111222222
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+...++|+|++|+||+++.+ +.+.++||+.+.
T Consensus 118 ----h~~~i~h~dl~p~Ni~i~~~-~~~~l~dfg~~~ 149 (277)
T cd06641 118 ----HSEKKIHRDIKAANVLLSEH-GEVKLADFGVAG 149 (277)
T ss_pred ----ccCCeecCCCCHHhEEECCC-CCEEEeecccce
Confidence 22468999999999999874 679999998663
No 198
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.65 E-value=0.00043 Score=58.63 Aligned_cols=135 Identities=16% Similarity=0.125 Sum_probs=75.6
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEE-E-CC---eeEEEee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGR-F-GD---GRVEEFI 114 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~-~-~~---~~v~e~i 114 (267)
...+..|..+.+|++... +..+++|....... ..+-.+|+.+++.+...++.+ .++. . .+ .+++||+
T Consensus 11 ~~~lg~g~~~~v~~~~~~------~~~~~~k~~~~~~~-~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYR------GNKVAVKCIKNDAT-AQAFLAEASVMTQLRHSNLVQ-LLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred eeeecccCCCeEEEEEEc------CCcEEEEEeCCCch-HHHHHHHHHHHHhCCCCCeee-EEEEEEcCCCceEEEEECC
Confidence 455666767899998743 46788888754321 111236888888775544444 3332 2 22 2789999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++... + +.... . .-.......+.. .+...+..+-
T Consensus 83 ~~~~L~~~--------------~---~~~~~--~--~~~~~~~~~~~~-----------------~i~~~l~~lH----- 119 (256)
T cd05082 83 AKGSLVDY--------------L---RSRGR--S--VLGGDCLLKFSL-----------------DVCEAMEYLE----- 119 (256)
T ss_pred CCCcHHHH--------------H---HhcCC--C--CCCHHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 88655321 0 01000 0 000111111211 1122222332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.++||+.+.
T Consensus 120 ---~~~i~H~dlkp~nil~~~~-~~~kl~dfg~~~ 150 (256)
T cd05082 120 ---ANNFVHRDLAARNVLVSED-NVAKVSDFGLTK 150 (256)
T ss_pred ---hCCEeccccchheEEEcCC-CcEEecCCccce
Confidence 2348999999999999874 689999998765
No 199
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=97.65 E-value=0.00044 Score=59.53 Aligned_cols=140 Identities=15% Similarity=0.174 Sum_probs=77.7
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEEC----Ce--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFG----DG--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~----~~--~v 110 (267)
.+..|..|..+.||.+.........+..+.+|....... ......+|+++++.+...++. ++++... .+ ++
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIV-KYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEe-eEEEEEecCCCceEEEE
Confidence 456677777888988653211112356788898754321 111113688888877544443 3444321 12 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|++|.++.. .. +.... . ......+.. .+...++.+-
T Consensus 87 ~e~~~~~~l~~-------~~----------~~~~l------~-~~~~~~i~~-----------------~l~~~l~~lH- 124 (283)
T cd05080 87 MEYVPLGSLRD-------YL----------PKHKL------N-LAQLLLFAQ-----------------QICEGMAYLH- 124 (283)
T ss_pred ecCCCCCCHHH-------HH----------HHcCC------C-HHHHHHHHH-----------------HHHHHHHHHH-
Confidence 89988776532 11 00000 0 111222221 1222223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.+.||+.+.
T Consensus 125 -------~~~i~H~dlkp~Nili~~~-~~~~l~dfg~~~ 155 (283)
T cd05080 125 -------SQHYIHRDLAARNVLLDND-RLVKIGDFGLAK 155 (283)
T ss_pred -------HCCeeccccChheEEEcCC-CcEEEeeccccc
Confidence 2259999999999999874 678999999875
No 200
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=97.65 E-value=0.00023 Score=60.51 Aligned_cols=133 Identities=13% Similarity=0.026 Sum_probs=73.3
Q ss_pred cCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---ccc-ChHHHHHHHHHHHhCCCCceEEEEECCe----eEEEeec
Q 024452 44 KGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---VFF-NRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEEFIH 115 (267)
Q Consensus 44 ~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e~i~ 115 (267)
..|..+.+|++.... .+..+++|+...... ... ...+|..+++.+..-++ ++++....++ ++++|.+
T Consensus 2 g~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~ 76 (262)
T cd05572 2 GVGGFGRVELVKVKS----KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFI-VKLYRTFKDKKYIYMLMEYCL 76 (262)
T ss_pred CCCCceEEEEEEECC----CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCE-eeeeeeEEcCCccEEEEecCC
Confidence 445567899998643 357899998754321 111 11356677766643333 3344443322 8899998
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++... +.+-.. . . ...+..+.. .+...+..+-
T Consensus 77 ~~~L~~~--------------l~~~~~--l------~-~~~~~~~~~-----------------~i~~~l~~lH------ 110 (262)
T cd05572 77 GGELWTI--------------LRDRGL--F------D-EYTARFYIA-----------------CVVLAFEYLH------ 110 (262)
T ss_pred CCcHHHH--------------HhhcCC--C------C-HHHHHHHHH-----------------HHHHHHHHHh------
Confidence 7655321 000000 0 0 011111211 1222222332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|+++.||+++++ +.+.++||+.+..
T Consensus 111 --~~~~~h~dl~~~nilv~~~-~~~~l~df~~~~~ 142 (262)
T cd05572 111 --NRGIIYRDLKPENLLLDSN-GYVKLVDFGFAKK 142 (262)
T ss_pred --hCCcccCCCCHHHEEEcCC-CCEEEeeCCcccc
Confidence 2458999999999999874 6899999998764
No 201
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.65 E-value=0.00045 Score=58.63 Aligned_cols=137 Identities=16% Similarity=0.172 Sum_probs=77.9
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC---eeEEEeecC
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD---GRVEEFIHA 116 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~---~~v~e~i~G 116 (267)
+..+..|..+.+|++.... +..+++|..........+-.+|+.+++.+...++.+ ++..... .++++|++|
T Consensus 11 ~~~ig~g~~~~v~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~-~~~~~~~~~~~lv~e~~~~ 84 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNG-----NTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQ-LYAVVSEEPIYIVTEYMSK 84 (260)
T ss_pred hheeccccCceEEEEEecC-----CceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEE-EEeEECCCCcEEEEEecCC
Confidence 4556777778999997532 467888887653221112247888888876555433 3333332 288999987
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
.++... . +... ... .. ......+.. .+...+..|-+
T Consensus 85 ~~L~~~-------~----------~~~~--~~~-~~-~~~~~~~~~-----------------~l~~al~~lH~------ 120 (260)
T cd05070 85 GSLLDF-------L----------KDGE--GRA-LK-LPNLVDMAA-----------------QVAAGMAYIER------ 120 (260)
T ss_pred CcHHHH-------H----------HhcC--CCC-CC-HHHHHHHHH-----------------HHHHHHHHHHH------
Confidence 655320 0 0100 000 01 111222221 12223333322
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||++++ ++.+.++||+.+.
T Consensus 121 --~~i~H~di~p~Nili~~-~~~~~l~dfg~~~ 150 (260)
T cd05070 121 --MNYIHRDLRSANILVGD-GLVCKIADFGLAR 150 (260)
T ss_pred --CCcccCCCccceEEEeC-CceEEeCCceeee
Confidence 24899999999999987 4678899999874
No 202
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.64 E-value=0.00025 Score=60.93 Aligned_cols=137 Identities=16% Similarity=0.174 Sum_probs=77.0
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccc-cChHHHHHHHHHHHhCCCCceEEEEECC--e--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVF-FNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e 112 (267)
...|..|..+.+|++.... .+..+++|...... ... .+..+|+.+++.+.... .++++....+ . +|++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~----~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRE----TGETVALKKVALRRLEGGIPNQALREIKALQACQHPY-VVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred EeecccCCCcEEEEEEECC----CCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCC-CcceeeEEecCCeeEEEec
Confidence 3556778888999997543 35788888875432 111 12246777777776323 3445554432 2 7889
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|+ |.++... + +....+ .. ......+.. .+...+..+..
T Consensus 80 ~~-~~~L~~~--------------~---~~~~~~----~~-~~~~~~~~~-----------------~i~~~l~~lH~-- 117 (286)
T cd07832 80 YM-PSDLSEV--------------L---RDEERP----LP-EAQVKSYMR-----------------MLLKGVAYMHA-- 117 (286)
T ss_pred cc-CCCHHHH--------------H---HhcCCC----CC-HHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 88 7555320 0 000000 00 111222221 12222233321
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|++|.||++++ .+.+.++||+.+..
T Consensus 118 ------~~i~H~dl~p~ni~~~~-~~~~~l~dfg~~~~ 148 (286)
T cd07832 118 ------NGIMHRDLKPANLLISA-DGVLKIADFGLARL 148 (286)
T ss_pred ------CCeecCCcCHHHEEEcC-CCcEEEeeeeeccc
Confidence 24899999999999997 46799999987653
No 203
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.64 E-value=0.00052 Score=59.36 Aligned_cols=139 Identities=14% Similarity=0.036 Sum_probs=77.3
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-c--c-ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-E--V-FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-~--~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v 110 (267)
.+..|..|..+.||++.... .+..+.+|+..... . . ...-.+|+.+++.+....+.+ .+..+. +. ++
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv 78 (285)
T cd05605 4 HYRVLGKGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS-LAYAYETKDALCLV 78 (285)
T ss_pred EEEEEecCCCeEEEEEEEcC----CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEee-eeeeecCCCeEEEE
Confidence 34567778789999997542 35778888765321 1 0 011135788888775544433 343333 22 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|++|..+... . .+...... + ......+.. .+...+..+-+
T Consensus 79 ~e~~~~~~L~~~-------~-------~~~~~~~~-----~--~~~~~~~~~-----------------qi~~~l~~lH~ 120 (285)
T cd05605 79 LTLMNGGDLKFH-------I-------YNMGNPGF-----D--EERAVFYAA-----------------EITCGLEDLHR 120 (285)
T ss_pred EeccCCCcHHHH-------H-------HhcCcCCC-----C--HHHHHHHHH-----------------HHHHHHHHHHH
Confidence 999998665310 0 00000000 0 111111111 12222333322
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 121 --------~~ivH~dlkp~Nil~~~~-~~~~l~Dfg~~~ 150 (285)
T cd05605 121 --------ERIVYRDLKPENILLDDY-GHIRISDLGLAV 150 (285)
T ss_pred --------CCcEecCCCHHHEEECCC-CCEEEeeCCCce
Confidence 248999999999999874 679999998765
No 204
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.63 E-value=0.00041 Score=62.02 Aligned_cols=140 Identities=18% Similarity=0.244 Sum_probs=88.0
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccC---------------------------hHHHHHHHHHHHhC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFN---------------------------RDDEIRTFECMSSQ 95 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~d---------------------------r~~E~~~~~~l~~~ 95 (267)
|+.|=...||.++.. ++..+.+|||....-.|-| .+.|.+-++.+.+.
T Consensus 152 iSTGKEANVYHat~~-----dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 152 ISTGKEANVYHATEE-----DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccCccceeEeeecC-----CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 456777889998643 3577899998543211222 14588889999999
Q ss_pred CC-CceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCccccc
Q 024452 96 GQ-GPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAK 174 (267)
Q Consensus 96 gl-~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 174 (267)
|+ +|+++..-..-+||+||.+.-.....|.+.++. ...++.++.++
T Consensus 227 GIP~PePIlLk~hVLVM~FlGrdgw~aPkLKd~~ls-----------------------~~ka~~~Y~~~---------- 273 (520)
T KOG2270|consen 227 GIPCPEPILLKNHVLVMEFLGRDGWAAPKLKDASLS-----------------------TSKARELYQQC---------- 273 (520)
T ss_pred CCCCCCceeeecceEeeeeccCCCCcCcccccccCC-----------------------hHHHHHHHHHH----------
Confidence 97 599998877779999997544444444442110 01122222221
Q ss_pred ccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc--chHhHH
Q 024452 175 EFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ--NMLNFK 236 (267)
Q Consensus 175 ~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~--~~~~fD 236 (267)
...+..|. ....|+|+||.--|+|+.+ |.+.+||---+-- +|-++|
T Consensus 274 -------v~~MR~lY-------~~c~LVHADLSEfN~Lyhd--G~lyiIDVSQSVE~DHP~ald 321 (520)
T KOG2270|consen 274 -------VRIMRRLY-------QKCRLVHADLSEFNLLYHD--GKLYIIDVSQSVEHDHPHALD 321 (520)
T ss_pred -------HHHHHHHH-------HHhceeccchhhhhheEEC--CEEEEEEccccccCCChhHHH
Confidence 11222232 2245999999999999994 6899999765532 555555
No 205
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.63 E-value=0.00061 Score=59.32 Aligned_cols=138 Identities=13% Similarity=0.072 Sum_probs=77.2
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVE 111 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~ 111 (267)
..+..|..|..+.+|++.... .+..+++|....... ......+|+.+++.+...++. +++.... +. +++
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~-~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 9 IKLDKLGEGTYATVYKGRSKL----TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV-TLHDIIHTEKSLTLVF 83 (301)
T ss_pred EEeeEeccCcCEEEEEEEEcC----CCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcc-eEEEEEecCCeEEEEE
Confidence 346677888889999997543 346788887643221 111224688888877654443 3444443 22 788
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++| ++. ..+ +..... .. ...+..+.. .+...++.+-
T Consensus 84 e~~~~-~l~--------------~~l---~~~~~~----~~-~~~~~~~~~-----------------qi~~aL~~lH-- 121 (301)
T cd07873 84 EYLDK-DLK--------------QYL---DDCGNS----IN-MHNVKLFLF-----------------QLLRGLNYCH-- 121 (301)
T ss_pred ecccc-CHH--------------HHH---HhcCCC----CC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 88775 111 001 111000 01 111222221 1222223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.|+||..+.
T Consensus 122 ------~~~i~H~dlkp~Nil~~~~-~~~kl~dfg~~~ 152 (301)
T cd07873 122 ------RRKVLHRDLKPQNLLINER-GELKLADFGLAR 152 (301)
T ss_pred ------hCCeeCCCCCHHHEEECCC-CcEEECcCcchh
Confidence 2358999999999999874 689999998764
No 206
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=97.63 E-value=0.0003 Score=68.01 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=27.7
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
++-++|+||+..|||+..+ +..+|-||.-|+-
T Consensus 164 ~pPiIHRDLKiENvLls~~-g~~KLCDFGSatt 195 (738)
T KOG1989|consen 164 KPPIIHRDLKIENVLLSAD-GNYKLCDFGSATT 195 (738)
T ss_pred CCccchhhhhhhheEEcCC-CCEEeCccccccc
Confidence 3459999999999999974 6899999998875
No 207
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.63 E-value=0.00043 Score=58.34 Aligned_cols=138 Identities=14% Similarity=0.061 Sum_probs=75.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccChHHHHHHHHHHHhCCCCceEEEEEC-C-e--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFNRDDEIRTFECMSSQGQGPRLLGRFG-D-G--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~-~--~v~e 112 (267)
...+..|....+|++.... ++..+++|...... ........|+.+++.+...++.+ .+..+. + . +++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e 79 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKA----DKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIR-YYESFLDKGKLNIVME 79 (256)
T ss_pred eEEecCCCCeEEEEEEEcC----CCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeeh-heeeeccCCEEEEEEE
Confidence 3456777778999998643 35788888764321 11111135667676665434333 333332 2 2 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. ... ... ... .. ...+..+.. .+...+..+.
T Consensus 80 ~~~~~~L~~-------~l~----------~~~--~~~-~~-~~~~~~i~~-----------------~l~~al~~lH--- 118 (256)
T cd08529 80 YAENGDLHK-------LLK----------MQR--GRP-LP-EDQVWRFFI-----------------QILLGLAHLH--- 118 (256)
T ss_pred eCCCCcHHH-------HHH----------Hhc--CCC-CC-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 999876532 111 100 000 01 011111111 1222223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 119 -----~~~i~h~dl~~~nili~~~-~~~~l~df~~~~ 149 (256)
T cd08529 119 -----SKKILHRDIKSLNLFLDAY-DNVKIGDLGVAK 149 (256)
T ss_pred -----HCCcccCCCCcceEEEeCC-CCEEEcccccce
Confidence 2369999999999999974 689999998654
No 208
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.62 E-value=0.00019 Score=63.40 Aligned_cols=29 Identities=21% Similarity=0.198 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 116 giiHrDlkp~Nili~~~-~~~kl~DfG~a~ 144 (325)
T cd05602 116 NIVYRDLKPENILLDSQ-GHIVLTDFGLCK 144 (325)
T ss_pred CeEecCCCHHHeEECCC-CCEEEccCCCCc
Confidence 59999999999999874 689999998764
No 209
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.62 E-value=0.00038 Score=61.73 Aligned_cols=137 Identities=15% Similarity=0.154 Sum_probs=73.8
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--c-ccc-ChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--E-VFF-NRDDEIRTFECMSSQGQGPRLLGRFG--DG--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~-~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v 110 (267)
-+..|..|....||++.... .+..+.+|+..... . ... ....|..++..+... ..+.++..+. +. +|
T Consensus 5 ~~~~lG~G~fg~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 5 ILKVIGRGAFGEVAVVKLKN----ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQ-WITTLHYAFQDENNLYLV 79 (332)
T ss_pred EEEEEEeCCCeEEEEEEECC----CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCC-CEeeEEEEEecCCEEEEE
Confidence 45677888889999998653 35778888864311 0 000 012344444433222 2233444432 22 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. . +.+... .. + ......|..+ +...++.+-+
T Consensus 80 ~ey~~~g~L~~-------~-------l~~~~~-~l-----~--~~~~~~~~~q-----------------i~~al~~lH~ 120 (332)
T cd05623 80 MDYYVGGDLLT-------L-------LSKFED-RL-----P--EDMARFYLAE-----------------MVIAIDSVHQ 120 (332)
T ss_pred EeccCCCcHHH-------H-------HHHhcC-CC-----C--HHHHHHHHHH-----------------HHHHHHHHHH
Confidence 99998865532 1 111100 00 0 1112222221 2222233321
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
..++|+|++|.||+++.+ +.+.|+||..|
T Consensus 121 --------~~iiHrDlkp~Nili~~~-~~~kL~DfG~a 149 (332)
T cd05623 121 --------LHYVHRDIKPDNILMDMN-GHIRLADFGSC 149 (332)
T ss_pred --------CCeEecCCCHHHEEECCC-CCEEEeecchh
Confidence 348999999999999864 68999999976
No 210
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=97.62 E-value=0.00025 Score=60.96 Aligned_cols=134 Identities=13% Similarity=0.031 Sum_probs=72.7
Q ss_pred cCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---c-ccChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEEEeec
Q 024452 44 KGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---V-FFNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RVEEFIH 115 (267)
Q Consensus 44 ~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~e~i~ 115 (267)
..|.-+.+|++.... .+..+.+|+...... . ...-..|..+++.++ +...++.+..+. .+ +|++|++
T Consensus 2 g~g~~g~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~ 76 (277)
T cd05577 2 GKGGFGEVCACQVKA----TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMN 76 (277)
T ss_pred CCCCceeEEEEEEcC----CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCC
Confidence 456667899987543 357888898754211 0 111135777777775 333333444432 22 8899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++... . . .... . .-....+..+..+ +...+..+..
T Consensus 77 ~~~L~~~-------l-------~---~~~~--~--~~~~~~~~~~~~q-----------------l~~~l~~lH~----- 113 (277)
T cd05577 77 GGDLKYH-------I-------Y---NVGE--P--GFPEARAIFYAAQ-----------------IICGLEHLHQ----- 113 (277)
T ss_pred CCcHHHH-------H-------H---HcCc--C--CCCHHHHHHHHHH-----------------HHHHHHHHHh-----
Confidence 8665320 1 0 0000 0 0001111112211 1222233321
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+||+++++ +.+.++||..+.
T Consensus 114 ---~~i~H~di~p~Nil~~~~-~~~~l~dfg~~~ 143 (277)
T cd05577 114 ---RRIVYRDLKPENVLLDDH-GNVRISDLGLAV 143 (277)
T ss_pred ---CCcccCCCCHHHEEECCC-CCEEEccCcchh
Confidence 248999999999999874 689999998663
No 211
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=97.61 E-value=0.00055 Score=59.05 Aligned_cols=159 Identities=14% Similarity=0.179 Sum_probs=91.1
Q ss_pred HHHHHHhC-CCCCCCCCCC----CcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cc--c-ChHHHHHH
Q 024452 18 KKVLQSVA-SDWGDVIDDS----DALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VF--F-NRDDEIRT 88 (267)
Q Consensus 18 ~~l~~~~~-p~w~~~~~~~----~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~--~-dr~~E~~~ 88 (267)
.+.+++.+ ..|...++.+ +.-.+.-+..|-=..|..|.... .+.-|.+|+-....- .+ + -..+|..+
T Consensus 22 l~~~~~~~~~~~~~~~~~~~~l~dfe~~~tlGtGSFGrV~LVr~k~----~g~yYAmKvL~k~~vVklKQveH~~nEk~v 97 (355)
T KOG0616|consen 22 LDKAREDFPKKWANTPQNPYSLQDFERLKTLGTGSFGRVHLVREKH----SGNYYAMKVLDKQKVVKLKQVEHTHNEKRV 97 (355)
T ss_pred HHHHHHhhhhhhcCCCCCCcchhhhhheeeeccCccceEEEEEEcc----CCceeehhhcCHHHHHHHHHHHHHhhHHHH
Confidence 33333334 4577544321 11245556677778899988643 357788888765420 00 0 01256677
Q ss_pred HHHHHhCCCCceEEEEECCe----eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHH
Q 024452 89 FECMSSQGQGPRLLGRFGDG----RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVA 164 (267)
Q Consensus 89 ~~~l~~~gl~P~v~~~~~~~----~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~ 164 (267)
++.+. +-..-++++.+.++ +|++|++|..+-. .|++-++.+ +...+|+..
T Consensus 98 L~~v~-~PFlv~l~~t~~d~~~lymvmeyv~GGElFS--------------~Lrk~~rF~----------e~~arFYAA- 151 (355)
T KOG0616|consen 98 LKAVS-HPFLVKLYGTFKDNSNLYMVMEYVPGGELFS--------------YLRKSGRFS----------EPHARFYAA- 151 (355)
T ss_pred Hhhcc-CceeEEEEEeeccCCeEEEEEeccCCccHHH--------------HHHhcCCCC----------chhHHHHHH-
Confidence 76665 43445566666543 8999999865532 111211111 123344431
Q ss_pred hhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 165 KSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.+.-.++.| +...++++|++|.|||++.+ |-+.|+||.||..
T Consensus 152 ---------------eivlAleyl--------H~~~iiYRDLKPENiLlD~~-G~iKitDFGFAK~ 193 (355)
T KOG0616|consen 152 ---------------EIVLALEYL--------HSLDIIYRDLKPENLLLDQN-GHIKITDFGFAKR 193 (355)
T ss_pred ---------------HHHHHHHHH--------HhcCeeeccCChHHeeeccC-CcEEEEeccceEE
Confidence 112233343 23448999999999999984 7899999999864
No 212
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.61 E-value=0.00025 Score=59.85 Aligned_cols=135 Identities=13% Similarity=0.104 Sum_probs=75.4
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc------cccChHHHHHHHHHHHhCCCCceEEEEECC--e--eE
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE------VFFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RV 110 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~------~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v 110 (267)
..|..|....+|++.... ++..+++|....... .......|+++++.+...++ .+.++...+ . ++
T Consensus 6 ~~ig~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv 80 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLD----DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI-VQYLGTEREEDNLYIF 80 (258)
T ss_pred ceeeecCCceEEEEEEcC----CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCc-hheeeeEecCCeEEEE
Confidence 346667678999987542 357888887643211 11112367777776654443 334444432 2 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|.++.. . +.+.+. .. ...+..+.. .+...+..+.+
T Consensus 81 ~e~~~~~~L~~-------~-------~~~~~~--------~~-~~~~~~~~~-----------------~i~~~l~~lH~ 120 (258)
T cd06632 81 LELVPGGSLAK-------L-------LKKYGS--------FP-EPVIRLYTR-----------------QILLGLEYLHD 120 (258)
T ss_pred EEecCCCcHHH-------H-------HHhcCC--------CC-HHHHHHHHH-----------------HHHHHHHHHHH
Confidence 99999865532 1 111100 00 111111221 12222233321
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+||+++++ +.+.|+||..+.
T Consensus 121 --------~~i~H~dl~~~ni~~~~~-~~~kl~d~~~~~ 150 (258)
T cd06632 121 --------RNTVHRDIKGANILVDTN-GVVKLADFGMAK 150 (258)
T ss_pred --------CCcccCCCCHHHEEECCC-CCEEEccCccce
Confidence 248999999999999874 689999998664
No 213
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.61 E-value=0.00048 Score=59.53 Aligned_cols=140 Identities=11% Similarity=0.102 Sum_probs=79.2
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc----cccC-hHHHHHHHHHHHhCCCCceEEEEEC-Ce---eE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE----VFFN-RDDEIRTFECMSSQGQGPRLLGRFG-DG---RV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~----~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v 110 (267)
...+..|..+.+|.+..... ...+..+.+|+...... .... ...|+++++.+..+...+.++..+. ++ ++
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~-~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSG-HDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLI 83 (290)
T ss_pred eeeeccCCcceEEEEEeccC-CCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEE
Confidence 35567777889999875311 11357888998754221 0111 1367888888876655555555543 22 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|++|.++.. .. .+ . .+ -....+..+.. .+...+..+-+
T Consensus 84 ~e~~~~~~L~~-------~l-------~~---~-~~-----l~~~~~~~~~~-----------------qi~~al~~lH~ 123 (290)
T cd05613 84 LDYINGGELFT-------HL-------SQ---R-ER-----FKEQEVQIYSG-----------------EIVLALEHLHK 123 (290)
T ss_pred EecCCCCcHHH-------HH-------HH---c-CC-----CCHHHHHHHHH-----------------HHHHHHHHHHh
Confidence 99999865431 01 00 0 00 00111222211 12222333321
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 124 --------~~i~H~dl~p~nil~~~~-~~~kl~dfg~~~ 153 (290)
T cd05613 124 --------LGIIYRDIKLENILLDSN-GHVVLTDFGLSK 153 (290)
T ss_pred --------CCeeccCCCHHHeEECCC-CCEEEeeCccce
Confidence 348999999999999874 689999998653
No 214
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.61 E-value=0.00023 Score=62.93 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=25.8
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 116 givH~Dlkp~NIll~~~-~~~kL~DfG~~~ 144 (325)
T cd05604 116 NIVYRDLKPENILLDSQ-GHVVLTDFGLCK 144 (325)
T ss_pred CeeecCCCHHHeEECCC-CCEEEeecCCcc
Confidence 59999999999999874 689999999875
No 215
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.61 E-value=0.00038 Score=59.47 Aligned_cols=140 Identities=14% Similarity=0.071 Sum_probs=74.6
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeecC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIHA 116 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~G 116 (267)
|..|....||++.... +.....+++|........ .....+|..+++.+...++ +++++.+.+ .+++||++|
T Consensus 3 lg~G~~g~Vy~~~~~~--~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 3 IGNGWFGKVILGEVNS--GYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNL-LQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred ccccCCceEEEEEEcC--CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCE-eeEEEEEcCCCCcEEEEECCCC
Confidence 5667678899987532 112456788876443211 1122357777777754443 345555432 288999987
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
..+.. .. +.........+. ...+..+..+ +...++.+-
T Consensus 80 g~L~~-------~l----------~~~~~~~~~~~~-~~~~~~~~~q-----------------i~~al~~lH------- 117 (269)
T cd05087 80 GDLKG-------YL----------RSCRKAELMTPD-PTTLQRMACE-----------------IALGLLHLH------- 117 (269)
T ss_pred CcHHH-------HH----------HHhhhccccccc-HHHHHHHHHH-----------------HHHHHHHHH-------
Confidence 65532 01 000000000000 1111112111 122223332
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||++++ ++.+.++||..+.
T Consensus 118 -~~~i~H~dlkp~nil~~~-~~~~kL~dfg~~~ 148 (269)
T cd05087 118 -KNNFIHSDLALRNCLLTA-DLTVKIGDYGLSH 148 (269)
T ss_pred -HCCEeccccCcceEEEcC-CCcEEECCccccc
Confidence 234999999999999987 4679999998763
No 216
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.61 E-value=0.00017 Score=62.00 Aligned_cols=137 Identities=15% Similarity=0.112 Sum_probs=76.1
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--c-cChHHHHHHHHHHHhCCCCceEEEEECC----eeEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--F-FNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~ 111 (267)
.+..|..|....+|++.... .+..+++|.+...... . ..-..|.++++.+..-++. ++++.+.+ .+++
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 5 NLGLVGEGSYGMVMKCKHKE----TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLV-NLIEVFRRKKRLYLVF 79 (286)
T ss_pred EeeeeccCCCeEEEEEEECC----CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchh-hHHHhcccCCeEEEEE
Confidence 34667778788999998643 3578999987543211 1 1113677777777544433 33333322 2889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||++|..+.. +. +. . .. .. ...+..+.. .+...+..|.+
T Consensus 80 e~~~~~~l~~-----------~~------~~-~--~~--~~-~~~~~~~~~-----------------~i~~~l~~LH~- 118 (286)
T cd07846 80 EFVDHTVLDD-----------LE------KY-P--NG--LD-ESRVRKYLF-----------------QILRGIEFCHS- 118 (286)
T ss_pred ecCCccHHHH-----------HH------hc-c--CC--CC-HHHHHHHHH-----------------HHHHHHHHHHH-
Confidence 9998744321 00 00 0 00 00 111111111 12222333321
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+||+++++ +.+.|+||+.+.
T Consensus 119 -------~~i~h~~l~p~ni~~~~~-~~~~l~dfg~~~ 148 (286)
T cd07846 119 -------HNIIHRDIKPENILVSQS-GVVKLCDFGFAR 148 (286)
T ss_pred -------CCccccCCCHHHEEECCC-CcEEEEeeeeee
Confidence 348999999999999874 689999998664
No 217
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.61 E-value=0.00093 Score=57.83 Aligned_cols=139 Identities=13% Similarity=-0.055 Sum_probs=76.1
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---cccC-hHHHHHHHHHHHhCCCCceEEEEECC---eeEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---VFFN-RDDEIRTFECMSSQGQGPRLLGRFGD---GRVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~---~~v~e 112 (267)
...|..|..+.+|++.... .+..+.+|....... .... ...|+.+++.+....+.+-......+ .++++
T Consensus 5 ~~~ig~G~~g~v~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred eEEeecCCCeEEEEEEEcC----CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 4557777788999987643 357888887643211 0011 12577777777554444332222222 28899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. ... .... .. .. ......+..+ +...+..+-
T Consensus 81 ~~~g~~L~~-------~l~----------~~~~--~~-l~-~~~~~~~~~q-----------------i~~~l~~lH--- 119 (285)
T cd05630 81 LMNGGDLKF-------HIY----------HMGE--AG-FE-EGRAVFYAAE-----------------ICCGLEDLH--- 119 (285)
T ss_pred ecCCCcHHH-------HHH----------Hhcc--cC-CC-HHHHHHHHHH-----------------HHHHHHHHH---
Confidence 999866632 010 0000 00 00 0111112211 122222332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 120 -----~~~iiH~dikp~Nil~~~~-~~~~l~Dfg~~~ 150 (285)
T cd05630 120 -----QERIVYRDLKPENILLDDH-GHIRISDLGLAV 150 (285)
T ss_pred -----hCCEEeCCCCHHHEEECCC-CCEEEeecccee
Confidence 2358999999999999874 679999998764
No 218
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.60 E-value=0.00036 Score=60.93 Aligned_cols=137 Identities=12% Similarity=0.126 Sum_probs=77.2
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc---cc-ChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV---FF-NRDDEIRTFECMSSQGQGPRLLGRFG-DG---RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~---~~-dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v 110 (267)
.+..+..|.-..+|++.... .+..+++|........ .. ...+|..+++.+..-++ +++++.+. +. ++
T Consensus 5 ~~~~l~~g~~~~v~~~~~~~----~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv 79 (305)
T cd05609 5 TIKLISNGAYGAVYLVRHKE----TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFV-VSMFCSFETKRHLCMV 79 (305)
T ss_pred EeeEeecCCCeeEEEEEECC----CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCe-eeeEEEEecCCEEEEE
Confidence 35667777778999987543 3578889876543211 11 11256666666644333 44555543 22 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|.++.. . +..-+ .. .......+..+ +...+..+..
T Consensus 80 ~e~~~g~~L~~-------~-------l~~~~--~~-------~~~~~~~~~~~-----------------i~~~l~~lH~ 119 (305)
T cd05609 80 MEYVEGGDCAT-------L-------LKNIG--AL-------PVDMARMYFAE-----------------TVLALEYLHN 119 (305)
T ss_pred EecCCCCcHHH-------H-------HHHcC--CC-------CHHHHHHHHHH-----------------HHHHHHHHHH
Confidence 99999855432 1 11100 00 11112222211 1122233321
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+||++++ .+.+.++||..+.
T Consensus 120 --------~~i~H~dl~p~NIll~~-~~~~~l~dfg~~~ 149 (305)
T cd05609 120 --------YGIVHRDLKPDNLLITS-MGHIKLTDFGLSK 149 (305)
T ss_pred --------CCccccCCchHHEEECC-CCCEEEeeCCCcc
Confidence 24899999999999987 4689999999764
No 219
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.60 E-value=0.00034 Score=59.12 Aligned_cols=138 Identities=14% Similarity=0.119 Sum_probs=74.1
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--ccc-ChHHHHHHHHHHHhCCCCceEEEEE--CCe---eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFF-NRDDEIRTFECMSSQGQGPRLLGRF--GDG---RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~-dr~~E~~~~~~l~~~gl~P~v~~~~--~~~---~v~ 111 (267)
++.+..|....+|++.... .+..+++|....... ... ....|.++++.+...++.+ ++... .++ +++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRT----DGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVA-YRESWEGEDGLLYIVM 79 (257)
T ss_pred EEEecCCCCeEEEEEEEcC----CCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeee-eeeeecCCCCEEEEEe
Confidence 4556778788999998543 346788887643211 111 1135666666665444333 23322 222 688
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|.++.. ... ... .. +-.......+..+ +...+..+-
T Consensus 80 e~~~~~~l~~-------~l~----------~~~--~~--~l~~~~~~~~~~~-----------------l~~~l~~lH-- 119 (257)
T cd08223 80 GFCEGGDLYH-------KLK----------EQK--GK--LLPENQVVEWFVQ-----------------IAMALQYLH-- 119 (257)
T ss_pred cccCCCcHHH-------HHH----------Hhc--CC--CCCHHHHHHHHHH-----------------HHHHHHHHH--
Confidence 9988765431 111 000 00 0011112112211 122223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 120 ------~~~i~H~di~p~nil~~~~-~~~~l~df~~~~ 150 (257)
T cd08223 120 ------EKHILHRDLKTQNVFLTRT-NIIKVGDLGIAR 150 (257)
T ss_pred ------hCCeeccCCCchhEEEecC-CcEEEecccceE
Confidence 2358999999999999874 679999999774
No 220
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=97.60 E-value=0.00034 Score=59.53 Aligned_cols=136 Identities=17% Similarity=0.117 Sum_probs=76.4
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-------cccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--e
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-------VFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--R 109 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-------~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~ 109 (267)
..|..|..+.+|++.... .+..+.+|....... ....-.+|+.+++.+...++. ++++... +. +
T Consensus 6 ~~lg~g~~~~v~~~~~~~----~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~~ 80 (268)
T cd06630 6 QQLGTGAFSSCYQARDVK----TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII-RMLGATCEDSHFNL 80 (268)
T ss_pred ceecCcCceEEEEEEEcC----CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCcee-hhhceeccCCeEEE
Confidence 446778888999987432 357888887643221 011114677777777654443 3344332 22 8
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
+++|.+|.++.. . +.+. . +. . ......|..+ +...+..|.
T Consensus 81 v~e~~~~~~L~~-------~-------l~~~---~-~~----~-~~~~~~~~~q-----------------l~~al~~LH 120 (268)
T cd06630 81 FVEWMAGGSVSH-------L-------LSKY---G-AF----K-EAVIINYTEQ-----------------LLRGLSYLH 120 (268)
T ss_pred EEeccCCCcHHH-------H-------HHHh---C-CC----C-HHHHHHHHHH-----------------HHHHHHHHH
Confidence 899999866532 1 1110 0 00 0 1112222221 222223332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.++..+.|+||..+.
T Consensus 121 --------~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~ 152 (268)
T cd06630 121 --------ENQIIHRDVKGANLLIDSTGQRLRIADFGAAA 152 (268)
T ss_pred --------hCCeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence 23589999999999998654468999998764
No 221
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.59 E-value=0.00027 Score=60.57 Aligned_cols=142 Identities=15% Similarity=0.145 Sum_probs=79.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC------eeEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD------GRVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~------~~v~ 111 (267)
+..+..|..+.+|++.......+.+..+++|........ ..+-.+|+..++.+...++ +++++.+.. .+++
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i-~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI-VKYKGVCEKPGGRSLRLIM 87 (284)
T ss_pred heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCCh-heEEeeeecCCCCceEEEE
Confidence 355677778999999864211123578889987654321 1122467777777644333 344444321 2789
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|.++.. .. +.... ... ......+.. .+...+..|.
T Consensus 88 e~~~~~~l~~-------~l----------~~~~~----~~~-~~~~~~~~~-----------------~l~~aL~~lH-- 126 (284)
T cd05038 88 EYLPSGSLRD-------YL----------QRHRD----QIN-LKRLLLFSS-----------------QICKGMDYLG-- 126 (284)
T ss_pred ecCCCCCHHH-------HH----------HhCcc----ccC-HHHHHHHHH-----------------HHHHHHHHHH--
Confidence 9998766532 11 11000 000 011111111 1222223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|.||+++.+ +.+.+.||+.+..
T Consensus 127 ------~~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~~ 158 (284)
T cd05038 127 ------SQRYIHRDLAARNILVESE-DLVKISDFGLAKV 158 (284)
T ss_pred ------hCCeecCCCCHHhEEEcCC-CCEEEcccccccc
Confidence 2358999999999999874 6899999987754
No 222
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.59 E-value=0.00048 Score=59.17 Aligned_cols=136 Identities=15% Similarity=0.154 Sum_probs=76.1
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccC-hHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFN-RDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
+..+..|..+.+|++.... ++..+++|.+..... .... ..+|+.+++.+....+. +++..+. .. +++|
T Consensus 6 ~~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRE----TGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLV-NLIEVFRRKRKLHLVFE 80 (286)
T ss_pred eeeecccCCeEEEEEEECC----CCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEe-eeeeEEeeCCEEEEEEe
Confidence 4556778788999997543 357888887643221 1111 13688888777643333 2333332 22 7899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|..+.. + +. . +.. .. ......+.. .+...+..|.+
T Consensus 81 ~~~~~~l~~-----------~---~~---~---~~~--~~-~~~~~~~~~-----------------ql~~~l~~LH~-- 118 (286)
T cd07847 81 YCDHTVLNE-----------L---EK---N---PRG--VP-EHLIKKIIW-----------------QTLQAVNFCHK-- 118 (286)
T ss_pred ccCccHHHH-----------H---Hh---C---CCC--CC-HHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 988743321 1 00 0 000 00 111222221 12222333322
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 119 ------~~i~H~dl~p~nil~~~~-~~~~l~dfg~~~ 148 (286)
T cd07847 119 ------HNCIHRDVKPENILITKQ-GQIKLCDFGFAR 148 (286)
T ss_pred ------CCceecCCChhhEEEcCC-CcEEECccccce
Confidence 347999999999999874 679999998775
No 223
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.59 E-value=0.00096 Score=56.01 Aligned_cols=137 Identities=13% Similarity=0.111 Sum_probs=77.9
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--ccc-ChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFF-NRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
...+..|....+|++.... .+..+++|.+..... ... ...+|++++..+...++.+ ++.... +. ++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~~v~e 79 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLE----TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVK-YIGSIETSDSLYIILE 79 (254)
T ss_pred eeEEcccCCeEEEEEEEcC----CCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccE-EEEEEEeCCEEEEEEe
Confidence 4567788889999987543 357899998765432 111 1246777777775545443 443332 22 7889
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .+.+.+.. . ......+.. .+...+..+-
T Consensus 80 ~~~~~~L~~--------------~~~~~~~l--------~-~~~~~~~~~-----------------~i~~~l~~lH--- 116 (254)
T cd06627 80 YAENGSLRQ--------------IIKKFGPF--------P-ESLVAVYVY-----------------QVLQGLAYLH--- 116 (254)
T ss_pred cCCCCcHHH--------------HHHhccCC--------C-HHHHHHHHH-----------------HHHHHHHHHh---
Confidence 998864431 11111100 0 111111111 1111222221
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|+||++++ ++.+.|.||+.+..
T Consensus 117 -----~~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~~ 148 (254)
T cd06627 117 -----EQGVIHRDIKAANILTTK-DGVVKLADFGVATK 148 (254)
T ss_pred -----hCCcccCCCCHHHEEECC-CCCEEEecccccee
Confidence 234899999999999987 46899999997763
No 224
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.59 E-value=0.00065 Score=57.87 Aligned_cols=140 Identities=15% Similarity=0.108 Sum_probs=76.5
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~ 113 (267)
...|..|..+.+|++..... +.....+.+|........ ..+-.+|..+++.+...++ .++++...+ .++++|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~-~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~iv~e~ 86 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLP-GKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNI-IRLEGVVTKSRPVMIITEY 86 (266)
T ss_pred eeEecCCccceEEEEEEccC-CCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCc-ceEeEEEecCCceEEEEEc
Confidence 45567777789999876431 112356778876543211 1111357777766654333 334544332 278999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
.+|.++... .. + +.. ... ...+..+..+ +...+..|.+
T Consensus 87 ~~~~~L~~~-------~~-------~-~~~------~~~-~~~~~~~~~~-----------------l~~~l~~Lh~--- 124 (266)
T cd05033 87 MENGSLDKF-------LR-------E-NDG------KFT-VGQLVGMLRG-----------------IASGMKYLSE--- 124 (266)
T ss_pred CCCCCHHHH-------HH-------h-ccC------CCC-HHHHHHHHHH-----------------HHHHHHHHHh---
Confidence 988765321 10 0 100 001 1122222211 2222233322
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.++||+.+.
T Consensus 125 -----~~i~H~di~p~nili~~~-~~~~l~dfg~~~ 154 (266)
T cd05033 125 -----MNYVHRDLAARNILVNSN-LVCKVSDFGLSR 154 (266)
T ss_pred -----CCcccCCCCcceEEEcCC-CCEEECccchhh
Confidence 348999999999999874 679999998765
No 225
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.59 E-value=0.00071 Score=57.58 Aligned_cols=136 Identities=14% Similarity=0.103 Sum_probs=74.8
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-----cccc-ChHHHHHHHHHHHhCCCCceEEEEECC----e-
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-----EVFF-NRDDEIRTFECMSSQGQGPRLLGRFGD----G- 108 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-----~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~----~- 108 (267)
.+.+..|....+|.+.... .+..+.+|...... .... ...+|+++++.+...++. +.++...+ .
T Consensus 7 ~~~l~~g~~g~v~~~~~~~----~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~~ 81 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDAD----TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIV-QYYGCLRDPMERTL 81 (265)
T ss_pred eeEEecCCceEEEEEEEcC----CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCee-eEEeEeccCCCceE
Confidence 4455667678999987542 35788888653211 1111 124578888877554443 34444321 1
Q ss_pred -eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHH
Q 024452 109 -RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISM 187 (267)
Q Consensus 109 -~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (267)
++++|++|.++.. .+.+... .+ ......+.. .+...++.
T Consensus 82 ~~v~e~~~~~~L~~--------------~l~~~~~--------~~-~~~~~~~~~-----------------~l~~~l~~ 121 (265)
T cd06652 82 SIFMEHMPGGSIKD--------------QLKSYGA--------LT-ENVTRKYTR-----------------QILEGVSY 121 (265)
T ss_pred EEEEEecCCCcHHH--------------HHHHcCC--------CC-HHHHHHHHH-----------------HHHHHHHH
Confidence 6789988766531 0110000 00 011111211 12222333
Q ss_pred HHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 188 LEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 188 l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+-+ ..++|+|++|.||++++ ++.+.|+||..+.
T Consensus 122 lH~--------~~i~H~dl~p~nil~~~-~~~~~l~Dfg~~~ 154 (265)
T cd06652 122 LHS--------NMIVHRDIKGANILRDS-VGNVKLGDFGASK 154 (265)
T ss_pred HHh--------CCEecCCCCHHHEEecC-CCCEEECcCcccc
Confidence 321 23899999999999987 4689999998764
No 226
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.58 E-value=0.00033 Score=61.81 Aligned_cols=29 Identities=17% Similarity=0.175 Sum_probs=25.6
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 116 givH~dikp~NIll~~~-~~~kl~Dfg~~~ 144 (323)
T cd05575 116 NIIYRDLKPENILLDSQ-GHVVLTDFGLCK 144 (323)
T ss_pred CeEeCCCCHHHeEECCC-CcEEEeccCCCc
Confidence 49999999999999874 689999999764
No 227
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.58 E-value=0.00052 Score=58.15 Aligned_cols=136 Identities=16% Similarity=0.074 Sum_probs=74.5
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC---eeEEEeecCC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD---GRVEEFIHAR 117 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~---~~v~e~i~G~ 117 (267)
|..|..+.+|++.....+ +....+++|........ .....+|..+++.+..-++. ++++.... .++++|++|.
T Consensus 3 ig~G~~g~v~~~~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 3 LGHGNFGSVVKGVYLMKS-GKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIV-RLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred cCccCceeEEEeEeeccC-CCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCee-eEEEEEcCCceEEEEEeCCCC
Confidence 556777899988653221 12367888887544321 11123677777777544433 34444432 2788998876
Q ss_pred CCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCC
Q 024452 118 TLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQ 197 (267)
Q Consensus 118 ~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 197 (267)
++.. . +.+-+ + . .......+..+ +...+..|.
T Consensus 81 ~L~~-------~-------l~~~~----~----~-~~~~~~~~~~q-----------------i~~~l~~lh-------- 112 (257)
T cd05060 81 PLLK-------Y-------LKKRR----E----I-PVSDLKELAHQ-----------------VAMGMAYLE-------- 112 (257)
T ss_pred cHHH-------H-------HHhCC----C----C-CHHHHHHHHHH-----------------HHHHHHHHh--------
Confidence 5431 1 11111 0 0 01112222211 222223332
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||+.+.
T Consensus 113 ~~~i~H~di~p~nili~~~-~~~kl~df~~~~ 143 (257)
T cd05060 113 SKHFVHRDLAARNVLLVNR-HQAKISDFGMSR 143 (257)
T ss_pred hcCeeccCcccceEEEcCC-CcEEeccccccc
Confidence 2348999999999999874 679999998764
No 228
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=97.57 E-value=0.00046 Score=59.78 Aligned_cols=80 Identities=15% Similarity=0.097 Sum_probs=44.8
Q ss_pred EEEecCceeeeeEEEEeCCCCC-CCCceEEEEEcCCCcccc-cChHHHHHHHHHHHhCCCCceEEEEECCe----eEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNN-GLARNVLVRIYGEGVEVF-FNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~-~~~~~~vlRi~~~~~~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e~ 113 (267)
...+..|..+.+|++....... .+...+.+|......... ....+|+++++.+...+ ..++++...++ ++++|
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~ 88 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH-IVKFYGVCGDGDPLIMVFEY 88 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCC-cceEEEEEccCCceEEEEec
Confidence 3556777788999987432110 123446677654432111 11236777777665433 34455554422 88999
Q ss_pred ecCCCCC
Q 024452 114 IHARTLS 120 (267)
Q Consensus 114 i~G~~l~ 120 (267)
++|.++.
T Consensus 89 ~~~~~L~ 95 (291)
T cd05094 89 MKHGDLN 95 (291)
T ss_pred CCCCcHH
Confidence 9988664
No 229
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.57 E-value=0.00047 Score=59.64 Aligned_cols=82 Identities=16% Similarity=0.159 Sum_probs=47.4
Q ss_pred EEEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~ 111 (267)
....+..|....+|++...... ......+.+|....... ......+|+.+++.+.++.-..+.++.+. ++ +++
T Consensus 16 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~ 95 (293)
T cd05053 16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVV 95 (293)
T ss_pred EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEE
Confidence 3566777878899998753211 01235678887654321 11112367777777754433334555443 22 789
Q ss_pred EeecCCCCC
Q 024452 112 EFIHARTLS 120 (267)
Q Consensus 112 e~i~G~~l~ 120 (267)
+|.+|.++.
T Consensus 96 e~~~~~~L~ 104 (293)
T cd05053 96 EYAAHGNLR 104 (293)
T ss_pred EeCCCCcHH
Confidence 999887653
No 230
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.56 E-value=0.00044 Score=58.98 Aligned_cols=138 Identities=14% Similarity=0.127 Sum_probs=76.1
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC-------C---eeE
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG-------D---GRV 110 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-------~---~~v 110 (267)
..+..|....+|++.... .+..+++|+.............|..+++.+..+.-..+.++.+. + .++
T Consensus 12 ~~lg~g~~g~vy~~~~~~----~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv 87 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVK----TGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 87 (272)
T ss_pred HheeecCCeEEEEEEEcC----CCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEE
Confidence 346667778999987543 35788888875432221222467788877755433334444321 1 167
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|.++.. .. .. +. ....+ ......+.. .+...+..|-+
T Consensus 88 ~e~~~~~~L~~-------~l-------~~-~~----~~~l~--~~~~~~~~~-----------------qi~~~l~~LH~ 129 (272)
T cd06637 88 MEFCGAGSVTD-------LI-------KN-TK----GNTLK--EEWIAYICR-----------------EILRGLSHLHQ 129 (272)
T ss_pred EEcCCCCcHHH-------HH-------Hh-cc----CCCCC--HHHHHHHHH-----------------HHHHHHHHHHH
Confidence 88887765532 01 00 00 00000 111111111 12222233322
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|+++.||+++++ +.+.|+||..+.
T Consensus 130 --------~~ivh~dl~~~nili~~~-~~~~l~Dfg~~~ 159 (272)
T cd06637 130 --------HKVIHRDIKGQNVLLTEN-AEVKLVDFGVSA 159 (272)
T ss_pred --------CCCccCCCCHHHEEECCC-CCEEEccCCCce
Confidence 248999999999999974 679999999874
No 231
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.56 E-value=0.00064 Score=58.79 Aligned_cols=143 Identities=17% Similarity=0.115 Sum_probs=78.3
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc---ccChHHHHHHHHHHHhCCCCceEEEEEC---C-----
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV---FFNRDDEIRTFECMSSQGQGPRLLGRFG---D----- 107 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~---~~dr~~E~~~~~~l~~~gl~P~v~~~~~---~----- 107 (267)
....|..|....+|++.... ++..+++|........ .....+|+.+++.+.++...++++.... .
T Consensus 5 ~~~~lg~g~~g~vy~~~~~~----~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 5 KLEKIGEGTYGKVYKARDKN----TGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred EeeEecccCCeEEEEEEECC----CCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 34566777788999998543 3578999976433211 1122468888888876543444554331 2
Q ss_pred -eeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHH
Q 024452 108 -GRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEIS 186 (267)
Q Consensus 108 -~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (267)
.++++|++| .+.. .+...+.. +.. +-.......+..+ +...+.
T Consensus 81 ~~lv~e~~~~-~l~~--------------~~~~~~~~--~~~--~~~~~~~~~~~~q-----------------i~~~L~ 124 (295)
T cd07837 81 LYLVFEYLDS-DLKK--------------FMDSNGRG--PGR--PLPAKTIKSFMYQ-----------------LLKGVA 124 (295)
T ss_pred EEEEeeccCc-CHHH--------------HHHHhccc--CCC--CCCHHHHHHHHHH-----------------HHHHHH
Confidence 277888775 2211 01110110 000 0011122222221 222223
Q ss_pred HHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 187 MLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 187 ~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.|- ...++|+|++|+||+++.+++.+.+.||..+.
T Consensus 125 ~LH--------~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 125 HCH--------KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred HHH--------HCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 332 23489999999999999744678999998664
No 232
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=97.55 E-value=0.00044 Score=59.00 Aligned_cols=29 Identities=28% Similarity=0.241 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.++||..+.
T Consensus 120 ~ivH~dlkp~Nill~~~-~~~kl~dfg~~~ 148 (269)
T cd05042 120 DFIHSDLALRNCQLTAD-LSVKIGDYGLAL 148 (269)
T ss_pred CEecccccHhheEecCC-CcEEEecccccc
Confidence 48999999999999974 689999999764
No 233
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.55 E-value=0.00044 Score=61.98 Aligned_cols=29 Identities=24% Similarity=0.355 Sum_probs=25.7
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++.+ +.+.|+||..|.
T Consensus 143 ~ivHrDlkp~NIl~~~~-~~~kl~Dfg~a~ 171 (359)
T cd07876 143 GIIHRDLKPSNIVVKSD-CTLKILDFGLAR 171 (359)
T ss_pred CcccCCCCHHHEEECCC-CCEEEecCCCcc
Confidence 58999999999999874 689999999774
No 234
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.54 E-value=0.00038 Score=59.30 Aligned_cols=136 Identities=14% Similarity=0.101 Sum_probs=76.3
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFI 114 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i 114 (267)
+..+..|..+.+|++.... ++..+++|+....... .....+|+.+++.+...++. ++++... +. +++||+
T Consensus 14 ~~~lg~g~~g~vy~~~~~~----~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii-~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLH----TGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIV-AYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hheeecCCCeEEEEEEECC----CCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCee-eeeEEEEeCCEEEEEEeCC
Confidence 4556777788999997542 3567888887543221 11123677777666554443 3343332 22 789998
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. . +|... +. + ......+.. .+...++.+-
T Consensus 89 ~~~~L~~-------~----------~~~~~-~~----~-~~~~~~~~~-----------------qi~~~l~~lH----- 123 (267)
T cd06646 89 GGGSLQD-------I----------YHVTG-PL----S-ELQIAYVCR-----------------ETLQGLAYLH----- 123 (267)
T ss_pred CCCcHHH-------H----------HHhcC-CC----C-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 8766532 0 11100 00 0 011111111 1222223332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++.+ +.+.|+||..+.
T Consensus 124 ---~~~i~H~dl~p~nill~~~-~~~~l~dfg~~~ 154 (267)
T cd06646 124 ---SKGKMHRDIKGANILLTDN-GDVKLADFGVAA 154 (267)
T ss_pred ---HCCccccCCCHHHEEECCC-CCEEECcCccce
Confidence 2358999999999999864 679999998775
No 235
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.53 E-value=0.0003 Score=59.62 Aligned_cols=136 Identities=20% Similarity=0.169 Sum_probs=76.0
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeec
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIH 115 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~ 115 (267)
...+..|..+.+|++... ....+++|+.........+...|..+++.+...++ ++.++.... .++++|++
T Consensus 9 ~~~lg~G~~~~v~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 9 LKELGSGQFGVVHLGKWR-----GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNL-VQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred hhhhccCCCceEEEeEec-----CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCE-EEEEEEEcCCCceEEEEecCC
Confidence 445677777899998753 24678999875432111111357777777754332 345554432 28899998
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++.. .. +... . ... ......+.. .+...+..+.+
T Consensus 83 ~~~L~~-------~l----------~~~~--~--~~~-~~~~~~i~~-----------------qi~~~l~~lH~----- 118 (256)
T cd05059 83 NGCLLN-------YL----------RERK--G--KLG-TEWLLDMCS-----------------DVCEAMEYLES----- 118 (256)
T ss_pred CCCHHH-------HH----------Hhcc--c--CCC-HHHHHHHHH-----------------HHHHHHHHHHH-----
Confidence 876531 01 0100 0 000 111111211 12222233321
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.++||+.+.
T Consensus 119 ---~~i~H~dl~p~ni~i~~~-~~~kl~dfg~~~ 148 (256)
T cd05059 119 ---NGFIHRDLAARNCLVGED-NVVKVSDFGLAR 148 (256)
T ss_pred ---CCcccccccHhhEEECCC-CcEEECCcccce
Confidence 238999999999999874 679999998764
No 236
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.53 E-value=0.0011 Score=55.95 Aligned_cols=138 Identities=10% Similarity=0.048 Sum_probs=77.3
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~ 113 (267)
...+..|..+.+|++.... .+..+++|.+.... ....+...|..+++.+...++ ++++..+. +. ++++|
T Consensus 5 ~~~lg~g~~g~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVN----SDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNI-VAFKESFEADGHLYIVMEY 79 (255)
T ss_pred EEEeeccCCeEEEEEEEcC----CCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEECCEEEEEEee
Confidence 4567778788999998643 35788999864322 111122467777776655444 33444433 22 78999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|..+.. .+....... . ....+..|..+ +...+..+.
T Consensus 80 ~~~~~l~~--------------~~~~~~~~~------~-~~~~~~~~~~~-----------------i~~al~~lH---- 117 (255)
T cd08219 80 CDGGDLMQ--------------KIKLQRGKL------F-PEDTILQWFVQ-----------------MCLGVQHIH---- 117 (255)
T ss_pred CCCCcHHH--------------HHHhccCCC------C-CHHHHHHHHHH-----------------HHHHHHHHh----
Confidence 98754421 011100000 0 01112222221 122223332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 118 ----~~~i~H~dl~p~nili~~~-~~~~l~dfg~~~ 148 (255)
T cd08219 118 ----EKRVLHRDIKSKNIFLTQN-GKVKLGDFGSAR 148 (255)
T ss_pred ----hCCcccCCCCcceEEECCC-CcEEEcccCcce
Confidence 2358999999999999874 679999999774
No 237
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.53 E-value=0.00061 Score=61.20 Aligned_cols=29 Identities=24% Similarity=0.355 Sum_probs=25.8
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++++ +.+.|+||..|.
T Consensus 146 ~ivH~Dlkp~NIll~~~-~~~kL~DfG~a~ 174 (364)
T cd07875 146 GIIHRDLKPSNIVVKSD-CTLKILDFGLAR 174 (364)
T ss_pred CeecCCCCHHHEEECCC-CcEEEEeCCCcc
Confidence 58999999999999874 689999999874
No 238
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.52 E-value=0.00067 Score=58.04 Aligned_cols=76 Identities=14% Similarity=0.120 Sum_probs=43.6
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-cc-ccChHHHHHHHHHHHhCCCCceEEEEECC-e---eEEEeecC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-EV-FFNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RVEEFIHA 116 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v~e~i~G 116 (267)
+..|....+|++..... +....+.+|...... .. ......|++++..+..+.-..++++.+.. + ++++|++|
T Consensus 3 lg~g~~g~v~~~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 3 IGEGNFGQVLKARIKKD--GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CCCCCCceEEEEEEcCC--CCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 55677789999976431 011245666654321 11 11224688888888655434456655532 2 88999988
Q ss_pred CCCC
Q 024452 117 RTLS 120 (267)
Q Consensus 117 ~~l~ 120 (267)
.++.
T Consensus 81 ~~L~ 84 (270)
T cd05047 81 GNLL 84 (270)
T ss_pred CcHH
Confidence 7553
No 239
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.52 E-value=0.00043 Score=59.46 Aligned_cols=81 Identities=17% Similarity=0.089 Sum_probs=45.5
Q ss_pred EEEEecCceeeeeEEEEeCCCCC-CCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEEC-C---eeEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNN-GLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFG-D---GRVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~-~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~---~~v~ 111 (267)
-...|+.|..+.+|++......+ ..+..+.+|........ ..+-.+|..+++.+...++. ++++.+. . .+++
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~ 88 (277)
T cd05036 10 LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIV-RLIGVSFERLPRFILL 88 (277)
T ss_pred eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEe-eEEEEEccCCCcEEEE
Confidence 45567888889999997643110 02456778876433211 11123566666666543333 3444332 2 2789
Q ss_pred EeecCCCCC
Q 024452 112 EFIHARTLS 120 (267)
Q Consensus 112 e~i~G~~l~ 120 (267)
+|++|.++.
T Consensus 89 e~~~g~~L~ 97 (277)
T cd05036 89 ELMAGGDLK 97 (277)
T ss_pred ecCCCCCHH
Confidence 999886553
No 240
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.52 E-value=0.00078 Score=58.25 Aligned_cols=136 Identities=14% Similarity=0.131 Sum_probs=76.3
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccC-hHHHHHHHHHHHhCCCCceEEEEEC--C--eeEEEe
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFN-RDDEIRTFECMSSQGQGPRLLGRFG--D--GRVEEF 113 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~e~ 113 (267)
..+.|..|..+.+|++.... .+..+++|..........+ ..+|..+++.+...++ .++++.+. + .++++|
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~v-v~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 23 NFVKIGEGSTGIVCIATDKS----TGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNI-VEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred cceEeccCCCeEEEEEEECC----CCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCCh-heEEEEEEcCCeEEEEEec
Confidence 56788888889999987432 3567888865322111110 1356666666654333 33444332 2 278999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|.++.. . +.. +. . + ...+..+..+ +...+..+.
T Consensus 98 ~~~~~L~~-------~-------~~~-~~--~------~-~~~~~~~~~q-----------------l~~~l~~lH---- 132 (285)
T cd06648 98 LEGGALTD-------I-------VTH-TR--M------N-EEQIATVCLA-----------------VLKALSFLH---- 132 (285)
T ss_pred cCCCCHHH-------H-------HHh-CC--C------C-HHHHHHHHHH-----------------HHHHHHHHH----
Confidence 98866532 1 111 00 0 0 1112222221 222233332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 133 ----~~~i~H~dl~p~Nil~~~~-~~~~l~d~g~~~ 163 (285)
T cd06648 133 ----AQGVIHRDIKSDSILLTSD-GRVKLSDFGFCA 163 (285)
T ss_pred ----hCCeecCCCChhhEEEcCC-CcEEEcccccch
Confidence 2348999999999999874 689999998654
No 241
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=97.51 E-value=0.0004 Score=61.63 Aligned_cols=137 Identities=14% Similarity=0.122 Sum_probs=73.4
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---cccC-hHHHHHHHHHHHhCCCCceEEEEEC--Ce--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---VFFN-RDDEIRTFECMSSQGQGPRLLGRFG--DG--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v 110 (267)
-+..|..|..+.||++.... .+..+.+|+...... .... ...|..++..+.. ...+.++..+. +. +|
T Consensus 5 i~~~lG~G~fg~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 5 IIKVIGRGAFGEVAVVKMKH----TERIYAMKILNKWEMLKRAETACFREERNVLVNGDC-QWITTLHYAFQDENYLYLV 79 (331)
T ss_pred EEEEEeeCCCeEEEEEEECC----CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEcCCEEEEE
Confidence 45677888889999998643 357788998643210 0000 1234444433322 22334444433 22 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++|..+.. .+.+... .. + ......|..+ +...++.+-
T Consensus 80 ~Ey~~gg~L~~--------------~l~~~~~-~l-----~--~~~~~~~~~q-----------------i~~~L~~lH- 119 (331)
T cd05624 80 MDYYVGGDLLT--------------LLSKFED-RL-----P--EDMARFYIAE-----------------MVLAIHSIH- 119 (331)
T ss_pred EeCCCCCcHHH--------------HHHHhcC-CC-----C--HHHHHHHHHH-----------------HHHHHHHHH-
Confidence 99999866542 1111100 00 0 0111112211 122223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
...++|+|++|.|||++.+ +.+.|+||..|
T Consensus 120 -------~~~iiHrDlkp~Nill~~~-~~~kl~DfG~a 149 (331)
T cd05624 120 -------QLHYVHRDIKPDNVLLDMN-GHIRLADFGSC 149 (331)
T ss_pred -------HCCeeeccCchHHEEEcCC-CCEEEEeccce
Confidence 2358999999999999874 67999999865
No 242
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.51 E-value=0.00062 Score=58.47 Aligned_cols=136 Identities=15% Similarity=0.068 Sum_probs=76.6
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccccc-ChHHHHHHHHHHHhCCCCceEEEEEC--C--eeEEEeec
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFF-NRDDEIRTFECMSSQGQGPRLLGRFG--D--GRVEEFIH 115 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~e~i~ 115 (267)
..+..|..+.+|++.... .+..+++|.......... +...|+.+++.+. +.-.+++++.+. + .+++||++
T Consensus 11 ~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd06611 11 GELGDGAFGKVYKAQHKE----TGLFAAAKIIQIESEEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWILIEFCD 85 (280)
T ss_pred HHhcCCCCceEEEEEEcC----CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEEeeccC
Confidence 345677788999998643 357888898754432211 1236777777776 333445555443 2 28899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|..+... ... ...+. . ......+.. .+...+..+.+
T Consensus 86 ~~~L~~~-------~~~----------~~~~l----~-~~~~~~~~~-----------------ql~~~l~~lh~----- 121 (280)
T cd06611 86 GGALDSI-------MLE----------LERGL----T-EPQIRYVCR-----------------QMLEALNFLHS----- 121 (280)
T ss_pred CCcHHHH-------HHH----------hcCCC----C-HHHHHHHHH-----------------HHHHHHHHHHH-----
Confidence 8766421 110 00000 0 011111211 11222233321
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++.+ +.+.++||..+.
T Consensus 122 ---~~i~h~dl~p~nili~~~-~~~~l~d~g~~~ 151 (280)
T cd06611 122 ---HKVIHRDLKAGNILLTLD-GDVKLADFGVSA 151 (280)
T ss_pred ---CCcccCCCChhhEEECCC-CCEEEccCccch
Confidence 247999999999999874 689999997653
No 243
>PTZ00036 glycogen synthase kinase; Provisional
Probab=97.51 E-value=0.00058 Score=63.27 Aligned_cols=30 Identities=27% Similarity=0.366 Sum_probs=25.8
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++.+++.+.|+||..|.
T Consensus 190 ~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 190 FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 499999999999998654568999999874
No 244
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.51 E-value=0.00043 Score=59.24 Aligned_cols=134 Identities=15% Similarity=0.095 Sum_probs=76.0
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccccChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEEEee
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVFFNRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVEEFI 114 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~e~i 114 (267)
..+..|..+.+|++.... .+..+++|+..... .......+|.++++.+..-++.+ ++..+ ... ++++|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKR----TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITK-YYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhcCCCCeEEEEEEECC----CCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeee-eeEEEEECCeEEEEEEee
Confidence 345667778999997543 35789999875432 11122246777777776444443 23322 222 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. .. +.... . ......+..+ +...+..+.
T Consensus 82 ~~~~L~~-------~~----------~~~~~------~-~~~~~~~~~q-----------------l~~~l~~lh----- 115 (274)
T cd06609 82 GGGSCLD-------LL----------KPGKL------D-ETYIAFILRE-----------------VLLGLEYLH----- 115 (274)
T ss_pred CCCcHHH-------HH----------hhcCC------C-HHHHHHHHHH-----------------HHHHHHHHH-----
Confidence 8866532 00 11010 0 1112112111 112222332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||++++ ++.+.++||..+.
T Consensus 116 ---~~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~ 146 (274)
T cd06609 116 ---EEGKIHRDIKAANILLSE-EGDVKLADFGVSG 146 (274)
T ss_pred ---hCCcccCCCCHHHEEECC-CCCEEEcccccce
Confidence 124899999999999997 4689999998663
No 245
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.50 E-value=0.00071 Score=57.31 Aligned_cols=137 Identities=15% Similarity=0.142 Sum_probs=77.9
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc---ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV---FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~---~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
...|..|..+.+|++.... ++..+++|........ ...-..|..+++.+...++ .++++... +. +++|
T Consensus 5 ~~~lg~G~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLD----TGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNL-VKYYGVEVHREKVYIFME 79 (264)
T ss_pred eeEeecCCCcEEEEEEECC----CCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCCh-hheeeeEecCCEEEEEEe
Confidence 3566778788999997542 3578888886543221 1112467777777755443 33444433 22 7899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .. +.... .. ......+.. .+...+..+.+
T Consensus 80 ~~~~~~L~~-------~~----------~~~~~-----~~-~~~~~~i~~-----------------~i~~~l~~lh~-- 117 (264)
T cd06626 80 YCSGGTLEE-------LL----------EHGRI-----LD-EHVIRVYTL-----------------QLLEGLAYLHS-- 117 (264)
T ss_pred cCCCCcHHH-------HH----------hhcCC-----CC-hHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 998766632 11 11000 00 011111211 12222233321
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|++++||++++ ++.+.|.||..+..
T Consensus 118 ------~~i~H~dl~~~nil~~~-~~~~kl~d~g~~~~ 148 (264)
T cd06626 118 ------HGIVHRDIKPANIFLDH-NGVIKLGDFGCAVK 148 (264)
T ss_pred ------CCcccCCCCHHHEEECC-CCCEEEcccccccc
Confidence 23899999999999997 46899999987653
No 246
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.50 E-value=0.00047 Score=59.25 Aligned_cols=137 Identities=15% Similarity=0.120 Sum_probs=76.5
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccccC-hHHHHHHHHHHHhCCCCceEEEEEC--C--eeEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVFFN-RDDEIRTFECMSSQGQGPRLLGRFG--D--GRVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~e 112 (267)
...|..|....+|++.... .+..+++|.+.... ....+ ..+|.++++.+..-++ +++++.+. + .++++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~----~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKA----TGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENI-VNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred EEEecccCCeeEEEEEeCC----CCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCe-eehhheEEECCEEEEEEe
Confidence 4556777778899997543 35789999875431 11111 2478888888874443 33444332 2 27899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|..+.. + .. .. .. .. ...+..+.. .+...+..|.
T Consensus 81 ~~~~~~l~~-----------~---~~----~~--~~--~~-~~~~~~~~~-----------------~i~~~l~~LH--- 117 (288)
T cd07833 81 YVERTLLEL-----------L---EA----SP--GG--LP-PDAVRSYIW-----------------QLLQAIAYCH--- 117 (288)
T ss_pred cCCCCHHHH-----------H---Hh----cC--CC--CC-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 988643321 0 00 00 00 00 011111111 1222223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|+++.||++++ ++.+.|.||+.+..
T Consensus 118 -----~~~i~H~dl~~~ni~~~~-~~~~kl~d~g~~~~ 149 (288)
T cd07833 118 -----SHNIIHRDIKPENILVSE-SGVLKLCDFGFARA 149 (288)
T ss_pred -----HCCeecCCCCHHHeEECC-CCCEEEEeeecccc
Confidence 124899999999999987 47899999987653
No 247
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.49 E-value=0.0014 Score=55.87 Aligned_cols=137 Identities=14% Similarity=0.146 Sum_probs=76.9
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc----------ccC-hHHHHHHHHHHHhCCCCceEEEEECCe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV----------FFN-RDDEIRTFECMSSQGQGPRLLGRFGDG 108 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~----------~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~~ 108 (267)
..++..|....+|++.... .+..+.+|........ ..+ -..|..+++.+..-+ .+++++....+
T Consensus 6 ~~~lg~g~~~~vy~~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~ 80 (272)
T cd06629 6 GELIGKGTYGRVYLALNVT----TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLN-IVQYLGFETTE 80 (272)
T ss_pred cceecccCceEEEEEeecC----CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCC-cceEEEEeccC
Confidence 4567788888999986432 3578888876432110 000 124666666664333 34566655432
Q ss_pred ----eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHH
Q 024452 109 ----RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDE 184 (267)
Q Consensus 109 ----~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (267)
+++||++|.++.. .+.+-. .. .. ..+..+.. .+...
T Consensus 81 ~~~~lv~e~~~~~~L~~--------------~l~~~~--~l-----~~--~~~~~~~~-----------------qi~~~ 120 (272)
T cd06629 81 EYLSIFLEYVPGGSIGS--------------CLRTYG--RF-----EE--QLVRFFTE-----------------QVLEG 120 (272)
T ss_pred CceEEEEecCCCCcHHH--------------HHhhcc--CC-----CH--HHHHHHHH-----------------HHHHH
Confidence 7899999876532 111100 00 00 11111111 12222
Q ss_pred HHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 185 ISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 185 ~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
+..+. ...++|+|++++||++++ ++.+.+.||..+..
T Consensus 121 l~~lH--------~~~i~H~dl~~~nil~~~-~~~~~l~d~~~~~~ 157 (272)
T cd06629 121 LAYLH--------SKGILHRDLKADNLLVDA-DGICKISDFGISKK 157 (272)
T ss_pred HHHHh--------hCCeeecCCChhhEEEcC-CCeEEEeecccccc
Confidence 23332 135899999999999987 46899999998864
No 248
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.49 E-value=0.00034 Score=59.19 Aligned_cols=136 Identities=17% Similarity=0.117 Sum_probs=75.9
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEE-CCe--eEEEeecC
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRF-GDG--RVEEFIHA 116 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~-~~~--~v~e~i~G 116 (267)
...+..|..+.+|.+.. .+..+++|........ ..-.+|+.+++.+...++.+ .++.. .++ ++++|++|
T Consensus 11 ~~~lg~g~~g~v~~~~~------~~~~~~iK~~~~~~~~-~~~~~e~~~l~~~~~~~i~~-~~~~~~~~~~~~v~e~~~~ 82 (254)
T cd05083 11 GEIIGEGEFGAVLQGEY------TGQKVAVKNIKCDVTA-QAFLEETAVMTKLHHKNLVR-LLGVILHNGLYIVMELMSK 82 (254)
T ss_pred eeeeccCCCCceEeccc------CCCceEEEeecCcchH-HHHHHHHHHHHhCCCCCcCe-EEEEEcCCCcEEEEECCCC
Confidence 34556666778998763 2467888887543211 11136778777776555544 33333 233 78899887
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
.++.. .. .. +. ... .. ......+.. .+...+..+.
T Consensus 83 ~~L~~-------~l-------~~-~~----~~~-~~-~~~~~~~~~-----------------qi~~al~~lH------- 117 (254)
T cd05083 83 GNLVN-------FL-------RT-RG----RAL-VS-VIQLLQFSL-----------------DVAEGMEYLE------- 117 (254)
T ss_pred CCHHH-------HH-------Hh-cC----cCC-CC-HHHHHHHHH-----------------HHHHHHHHHH-------
Confidence 76532 11 00 00 000 01 111111211 1122222332
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|+||+++.+ +.+.|+||+.+..
T Consensus 118 -~~~~~H~dl~p~nili~~~-~~~kl~Dfg~~~~ 149 (254)
T cd05083 118 -SKKLVHRDLAARNILVSED-GVAKVSDFGLARV 149 (254)
T ss_pred -hCCeeccccCcceEEEcCC-CcEEECCCcccee
Confidence 2458999999999999874 6899999997754
No 249
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.49 E-value=0.00065 Score=58.96 Aligned_cols=29 Identities=24% Similarity=0.228 Sum_probs=25.2
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|+||+++++ +.+.++||..+.
T Consensus 149 ~i~H~dlkp~Nill~~~-~~~kl~dfg~~~ 177 (295)
T cd05097 149 NFVHRDLATRNCLVGNH-YTIKIADFGMSR 177 (295)
T ss_pred CeeccccChhhEEEcCC-CcEEeccccccc
Confidence 58999999999999864 679999998764
No 250
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.49 E-value=0.00082 Score=58.10 Aligned_cols=138 Identities=15% Similarity=0.084 Sum_probs=76.5
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECCe----eEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVE 111 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~ 111 (267)
..++.|..|..+.+|++.... .+..+++|........ .....+|..+++.+...++ ++++....++ +++
T Consensus 8 ~~~~~ig~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 8 LNLEKLGEGSYATVYKGISRI----NGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANI-VLLHDIIHTKETLTFVF 82 (291)
T ss_pred EEEEEEEecCCEEEEEEEEcC----CCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCE-eEEEEEEecCCeEEEEE
Confidence 346677788889999987542 3578999987543211 1122468888877755443 3444443321 778
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|..+. .+ .... .. .....+..+.. .+...+..|-
T Consensus 83 e~~~~~l~~-----------~~-------~~~~--~~---~~~~~~~~~~~-----------------qi~~~L~~lH-- 120 (291)
T cd07870 83 EYMHTDLAQ-----------YM-------IQHP--GG---LHPYNVRLFMF-----------------QLLRGLAYIH-- 120 (291)
T ss_pred ecccCCHHH-----------HH-------HhCC--CC---CCHHHHHHHHH-----------------HHHHHHHHHH--
Confidence 887652111 00 0000 00 00111111111 1122223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 121 ------~~~i~H~dlkp~Nil~~~~-~~~~l~Dfg~~~ 151 (291)
T cd07870 121 ------GQHILHRDLKPQNLLISYL-GELKLADFGLAR 151 (291)
T ss_pred ------hCCcccCCCChHHEEEcCC-CcEEEecccccc
Confidence 2248999999999999874 689999999664
No 251
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.48 E-value=0.00071 Score=58.22 Aligned_cols=78 Identities=13% Similarity=0.041 Sum_probs=45.0
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cc-cChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEee
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VF-FNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFI 114 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i 114 (267)
..|..|--+.+|++.........+..+.+|....... .. .+-.+|..+++.+...++ +++++.... .+++||+
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~ 89 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNI-VCLLGVVTQEQPVCMLFEYL 89 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCe-eeEEEEEecCCceEEEEEcC
Confidence 5667777789999874221111346777877653221 11 112467777777754443 345554332 2889999
Q ss_pred cCCCC
Q 024452 115 HARTL 119 (267)
Q Consensus 115 ~G~~l 119 (267)
+|.++
T Consensus 90 ~~~~L 94 (283)
T cd05090 90 NQGDL 94 (283)
T ss_pred CCCcH
Confidence 87655
No 252
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=97.48 E-value=0.00017 Score=62.37 Aligned_cols=147 Identities=12% Similarity=0.074 Sum_probs=82.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cccC--hHHHHHHHHHHHhCCCC--ceEEEEECCe-eEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VFFN--RDDEIRTFECMSSQGQG--PRLLGRFGDG-RVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~~d--r~~E~~~~~~l~~~gl~--P~v~~~~~~~-~v~e~ 113 (267)
+..+..|-...||+|...+ .++-+.+|.+-...+ ..+. .-+|+.+++.|....++ -+|+-.-... +|+||
T Consensus 7 LgkvGEGSYGvV~KCrnk~----TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 7 LGKVGEGSYGVVMKCRNKD----TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred hhccccCcceEEEEeccCC----cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 3456788899999998654 356777887633221 1221 13799999999876653 2222222222 78999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++-..+.. |... |.+. + .+.+..|+-++ ...+.+
T Consensus 83 ~dhTvL~e------------------Le~~--p~G~-~--~~~vk~~l~Q~-----------------l~ai~~------ 116 (396)
T KOG0593|consen 83 CDHTVLHE------------------LERY--PNGV-P--SELVKKYLYQL-----------------LKAIHF------ 116 (396)
T ss_pred cchHHHHH------------------HHhc--cCCC-C--HHHHHHHHHHH-----------------HHHhhh------
Confidence 88422221 0010 1111 1 12222232211 111121
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc----chHhHHHHh
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ----NMLNFKRAC 239 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~----~~~~fD~A~ 239 (267)
-.....+|+|++|.|||+.. ++.+.+-||.||.. |...=|..+
T Consensus 117 --cHk~n~IHRDIKPENILit~-~gvvKLCDFGFAR~L~~pgd~YTDYVA 163 (396)
T KOG0593|consen 117 --CHKNNCIHRDIKPENILITQ-NGVVKLCDFGFARTLSAPGDNYTDYVA 163 (396)
T ss_pred --hhhcCeecccCChhheEEec-CCcEEeccchhhHhhcCCcchhhhhhh
Confidence 12233899999999999997 47899999999963 444444443
No 253
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.48 E-value=0.00055 Score=58.83 Aligned_cols=79 Identities=18% Similarity=0.130 Sum_probs=44.1
Q ss_pred EEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCcc-cccC-hHHHHHHHHHHHhCCCCceEEEEECC----eeEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVE-VFFN-RDDEIRTFECMSSQGQGPRLLGRFGD----GRVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~-~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e 112 (267)
...|..|....||++...... ......+.+|....... .... -.+|+.++..+...++. ++++...+ .++++
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~-~~~~~~~~~~~~~~~~e 88 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIV-CLLGVCTKEQPTCMLFE 88 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccc-eEEEEEcCCCceEEEEe
Confidence 455677777899998754211 01235678887654321 1111 13577777666544433 34444332 27899
Q ss_pred eecCCCC
Q 024452 113 FIHARTL 119 (267)
Q Consensus 113 ~i~G~~l 119 (267)
|.+|.++
T Consensus 89 ~~~~~~L 95 (283)
T cd05048 89 YLAHGDL 95 (283)
T ss_pred cCCCCcH
Confidence 9987654
No 254
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.47 E-value=0.00088 Score=57.58 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=77.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC--------C--ee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG--------D--GR 109 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--------~--~~ 109 (267)
...+..|-.+.+|++.... .+..+.+|+.............|..+++.+..+.-..+.++.+- + .+
T Consensus 21 ~~~lg~g~~~~v~~~~~~~----~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 96 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVK----TGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWL 96 (282)
T ss_pred heeeccCCCeEEEEEEEcC----CCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEE
Confidence 3556777788999998643 35788899865432211112457777777755443344444331 1 27
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
++||++|.++.. ... . +. ....+ ...+..+.. .+...+..+-
T Consensus 97 v~e~~~~~~L~~-------~~~-------~-~~----~~~~~--~~~~~~~~~-----------------qi~~al~~LH 138 (282)
T cd06636 97 VMEFCGAGSVTD-------LVK-------N-TK----GNALK--EDWIAYICR-----------------EILRGLAHLH 138 (282)
T ss_pred EEEeCCCCcHHH-------HHH-------H-cc----CCCCC--HHHHHHHHH-----------------HHHHHHHHHH
Confidence 899998766532 111 0 00 00001 011111111 1222333332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|+++.||+++++ +.+.|+||..+.
T Consensus 139 --------~~~ivH~dl~~~nili~~~-~~~~l~dfg~~~ 169 (282)
T cd06636 139 --------AHKVIHRDIKGQNVLLTEN-AEVKLVDFGVSA 169 (282)
T ss_pred --------HCCcccCCCCHHHEEECCC-CCEEEeeCcchh
Confidence 2358999999999999974 679999998764
No 255
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.47 E-value=0.00065 Score=59.38 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=48.7
Q ss_pred EEEecCceeeeeEEEEeCCCCC---CCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEECC-e---eE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNN---GLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~---~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v 110 (267)
...|..|....||++....... .....+++|+...... .......|+.+++.+.++.-..+++..+.. + ++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 102 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 4677788788999987432100 0124688888765321 111224678888888666545556655432 2 88
Q ss_pred EEeecCCCCC
Q 024452 111 EEFIHARTLS 120 (267)
Q Consensus 111 ~e~i~G~~l~ 120 (267)
++|++|.++.
T Consensus 103 ~e~~~~~~L~ 112 (307)
T cd05098 103 VEYASKGNLR 112 (307)
T ss_pred EecCCCCcHH
Confidence 9998876553
No 256
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.47 E-value=0.00081 Score=60.38 Aligned_cols=133 Identities=14% Similarity=0.094 Sum_probs=76.3
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC--C--eeEEEe
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG--D--GRVEEF 113 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~e~ 113 (267)
..+..|..|....||++.... .+..+++|+..... . ..|..+++.+...++ +++++.+. + .+++++
T Consensus 69 ~~~~~lg~G~~g~Vy~~~~~~----~~~~valK~~~~~~--~---~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 69 TVIKTLTPGSEGRVFVATKPG----QPDPVVLKIGQKGT--T---LIEAMLLQNVNHPSV-IRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred EEEEEecCCCCeEEEEEEECC----CCceEEEEeCCccc--c---HHHHHHHHhCCCCCC-cChhheEEeCCeeEEEEEc
Confidence 356777888889999998643 35788899854322 1 368888888765444 33444432 2 167777
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
+.|.-. .. +. ....+ .. ......+.. .+...+..|-+
T Consensus 139 ~~~~l~-----------~~----l~---~~~~~----~~-~~~~~~i~~-----------------qi~~aL~~LH~--- 175 (357)
T PHA03209 139 YSSDLY-----------TY----LT---KRSRP----LP-IDQALIIEK-----------------QILEGLRYLHA--- 175 (357)
T ss_pred cCCcHH-----------HH----HH---hccCC----CC-HHHHHHHHH-----------------HHHHHHHHHHH---
Confidence 754110 00 10 00000 01 111222221 12222333321
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 176 -----~~ivHrDlkp~Nill~~~-~~~kl~DfG~a~ 205 (357)
T PHA03209 176 -----QRIIHRDVKTENIFINDV-DQVCIGDLGAAQ 205 (357)
T ss_pred -----CCeecCCCCHHHEEECCC-CCEEEecCcccc
Confidence 248999999999999874 679999999875
No 257
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.46 E-value=0.0006 Score=60.96 Aligned_cols=29 Identities=24% Similarity=0.355 Sum_probs=25.7
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|+||+++.+ +.+.|+||..|.
T Consensus 139 givHrDikp~Nill~~~-~~~kl~Dfg~~~ 167 (355)
T cd07874 139 GIIHRDLKPSNIVVKSD-CTLKILDFGLAR 167 (355)
T ss_pred CcccCCCChHHEEECCC-CCEEEeeCcccc
Confidence 58999999999999874 689999999875
No 258
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.46 E-value=0.0017 Score=55.97 Aligned_cols=29 Identities=17% Similarity=0.161 Sum_probs=25.5
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+++|+|++|+||+++++ +.+.|+||+.+.
T Consensus 128 ~ivH~dikp~Nili~~~-~~~kl~dfg~~~ 156 (288)
T cd07863 128 CIVHRDLKPENILVTSG-GQVKLADFGLAR 156 (288)
T ss_pred CeecCCCCHHHEEECCC-CCEEECccCccc
Confidence 49999999999999874 689999998764
No 259
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.46 E-value=0.0015 Score=55.51 Aligned_cols=135 Identities=16% Similarity=0.135 Sum_probs=74.0
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc---------c-cChHHHHHHHHHHHhCCCCceEEEEEC--Ce
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV---------F-FNRDDEIRTFECMSSQGQGPRLLGRFG--DG 108 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~---------~-~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~ 108 (267)
..+..|..+.+|++.... .+..+++|........ + ....+|+.+++.+...++ +++++... +.
T Consensus 6 ~~ig~g~~~~v~~a~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~ 80 (267)
T cd06628 6 ALIGSGSFGSVYLGMNAS----SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENI-VQYLGSSLDADH 80 (267)
T ss_pred ceeecCCCeEEEEEEecC----CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCe-eeEEEEEEeCCc
Confidence 345667788999997432 3577888866433211 0 111356666766644333 34555443 22
Q ss_pred --eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHH
Q 024452 109 --RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEIS 186 (267)
Q Consensus 109 --~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (267)
++++|++|.++.. .. .+ +. .. + ...+..+.. .+...++
T Consensus 81 ~~lv~e~~~~~~L~~-------~l-------~~-~~-~l-----~--~~~~~~~~~-----------------~l~~~l~ 120 (267)
T cd06628 81 LNIFLEYVPGGSVAA-------LL-------NN-YG-AF-----E--ETLVRNFVR-----------------QILKGLN 120 (267)
T ss_pred cEEEEEecCCCCHHH-------HH-------Hh-cc-Cc-----c--HHHHHHHHH-----------------HHHHHHH
Confidence 8899998865432 11 00 00 00 0 011111211 1222333
Q ss_pred HHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 187 MLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 187 ~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.+- ...++|+|++|.||++++ .+.+.|.||..+.
T Consensus 121 ~lH--------~~~ivH~di~p~nil~~~-~~~~~l~dfg~~~ 154 (267)
T cd06628 121 YLH--------NRGIIHRDIKGANILVDN-KGGIKISDFGISK 154 (267)
T ss_pred HHH--------hcCcccccCCHHHEEEcC-CCCEEecccCCCc
Confidence 332 124899999999999987 4679999998653
No 260
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.46 E-value=0.00057 Score=58.27 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=75.6
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-----cc-ccChHHHHHHHHHHHhCCCCceEEEEEC---Ce--
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-----EV-FFNRDDEIRTFECMSSQGQGPRLLGRFG---DG-- 108 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-----~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~---~~-- 108 (267)
...+..|..+.+|++.... .+..+.+|...... .. .....+|+.+++.+...++.+ .++... +.
T Consensus 7 ~~~lg~g~~g~vy~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~ 81 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVD----TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQ-YYGCLRDRAEKTL 81 (266)
T ss_pred cceecCCCCEEEEEEEEcC----CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeee-EEEEEEcCCCCEE
Confidence 4566777788999997543 35788888764321 11 111246888888886544443 344322 12
Q ss_pred -eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHH
Q 024452 109 -RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISM 187 (267)
Q Consensus 109 -~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (267)
++++|++|.++.. .. . +.. . .. ......+.. .+...+..
T Consensus 82 ~l~~e~~~~~~L~~-------~l-------~---~~~----~-l~-~~~~~~~~~-----------------qi~~~l~~ 121 (266)
T cd06651 82 TIFMEYMPGGSVKD-------QL-------K---AYG----A-LT-ESVTRKYTR-----------------QILEGMSY 121 (266)
T ss_pred EEEEeCCCCCcHHH-------HH-------H---HcC----C-CC-HHHHHHHHH-----------------HHHHHHHH
Confidence 6788888766532 01 0 000 0 00 001111111 12222233
Q ss_pred HHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 188 LEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 188 l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+- ...++|+|++|.||+++++ +.+.|.||+.+.
T Consensus 122 LH--------~~~i~H~~l~p~nil~~~~-~~~~l~dfg~~~ 154 (266)
T cd06651 122 LH--------SNMIVHRDIKGANILRDSA-GNVKLGDFGASK 154 (266)
T ss_pred HH--------hCCeeeCCCCHHHEEECCC-CCEEEccCCCcc
Confidence 32 2348999999999999874 679999998764
No 261
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.45 E-value=0.00054 Score=58.66 Aligned_cols=136 Identities=15% Similarity=0.147 Sum_probs=73.4
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--c-cChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--F-FNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~-~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
+..|..|..+.+|++.... ++..+++|........ . .....|.++++.+...++. +++.... +. ++++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKL----TGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNII-KLLDVFRHKGDLYLVFE 78 (283)
T ss_pred ceeeecCCCceEEEEEcCC----CCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcc-hHHHhhccCCCEEEEEe
Confidence 3557777788999997543 3578888876543211 1 1124677777777643332 2333222 22 7888
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|.+| .+.. ... + +. .+ .+ ......+.. .+...+..|-
T Consensus 79 ~~~~-~l~~-------~l~-------~-~~--~~----~~-~~~~~~~~~-----------------~i~~~l~~LH--- 115 (283)
T cd05118 79 FMDT-DLYK-------LIK-------D-RQ--RG----LP-ESLIKSYLY-----------------QLLQGLAFCH--- 115 (283)
T ss_pred ccCC-CHHH-------HHH-------h-hc--cc----CC-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 8875 2210 110 0 00 00 00 011111111 1222223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||+.+.
T Consensus 116 -----~~~i~H~dl~p~nili~~~-~~~~l~df~~~~ 146 (283)
T cd05118 116 -----SHGILHRDLKPENLLINTE-GVLKLADFGLAR 146 (283)
T ss_pred -----HCCeeecCcCHHHEEECCC-CcEEEeeeeeeE
Confidence 2348999999999999974 689999998763
No 262
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.45 E-value=0.00058 Score=57.79 Aligned_cols=137 Identities=14% Similarity=0.091 Sum_probs=77.2
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-c-ccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-V-FFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~ 113 (267)
...|..|-...+|++.... .+..+++|+...... . .....+|+..+..+...++ ++++..... .++++|
T Consensus 6 ~~~i~~g~~~~v~~~~~~~----~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKP----TGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV-VKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred eeeeeecCCeEEEEEEEcC----CCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCe-eeEEEEEccCCeEEEEEEe
Confidence 3556666678899997543 357889998765432 1 1112467777777763333 444444332 288999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|.++.. ... .. .+. . ......+.. .+.+.+..+.
T Consensus 81 ~~~~~L~~-------~l~---~~--------~~l----~-~~~~~~~~~-----------------~l~~~l~~lh---- 116 (264)
T cd06623 81 MDGGSLAD-------LLK---KV--------GKI----P-EPVLAYIAR-----------------QILKGLDYLH---- 116 (264)
T ss_pred cCCCcHHH-------HHH---Hc--------CCC----C-HHHHHHHHH-----------------HHHHHHHHHh----
Confidence 99876642 111 00 000 0 011111111 1112222221
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
....++|+|++|+||+++++ +.+.|+||+.+.
T Consensus 117 ---~~~~~~H~~l~~~ni~~~~~-~~~~l~df~~~~ 148 (264)
T cd06623 117 ---TKRHIIHRDIKPSNLLINSK-GEVKIADFGISK 148 (264)
T ss_pred ---ccCCCccCCCCHHHEEECCC-CCEEEccCccce
Confidence 11568999999999999874 689999998665
No 263
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.45 E-value=0.0014 Score=55.66 Aligned_cols=136 Identities=14% Similarity=0.087 Sum_probs=74.6
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccC-hHHHHHHHHHHHhCCCCceEEEEECC---eeEEEeecCC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFN-RDDEIRTFECMSSQGQGPRLLGRFGD---GRVEEFIHAR 117 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~---~~v~e~i~G~ 117 (267)
|..|..+.+|++...... .+..+.+|+....... ... -.+|..+++.+...++. +.++.... .+|+||++|.
T Consensus 3 ig~G~~g~v~~~~~~~~~--~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii-~~~~~~~~~~~~lv~e~~~~~ 79 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRK--KQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIV-RMIGVCEAEALMLVMEMASGG 79 (257)
T ss_pred cCCCCcccEEEEEEecCC--CceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeE-EEEEEEcCCCeEEEEEeCCCC
Confidence 566767889987543211 2346888887544321 111 24678888887544433 34444432 2889999987
Q ss_pred CCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCC
Q 024452 118 TLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQ 197 (267)
Q Consensus 118 ~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 197 (267)
++.. ... .... . -....+..+.. .+...+..+-+
T Consensus 80 ~L~~-------~l~----------~~~~---~--~~~~~~~~~~~-----------------~i~~~l~~lH~------- 113 (257)
T cd05115 80 PLNK-------FLS----------GKKD---E--ITVSNVVELMH-----------------QVSMGMKYLEG------- 113 (257)
T ss_pred CHHH-------HHH----------hCCC---C--CCHHHHHHHHH-----------------HHHHHHHHHHh-------
Confidence 6542 110 0000 0 00111221211 12222333321
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+||+++++ +.+.++||..+.
T Consensus 114 -~~i~H~dlkp~nil~~~~-~~~kl~dfg~~~ 143 (257)
T cd05115 114 -KNFVHRDLAARNVLLVNQ-HYAKISDFGLSK 143 (257)
T ss_pred -cCeeecccchheEEEcCC-CcEEeccCCccc
Confidence 248999999999999874 678999998764
No 264
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.44 E-value=0.0012 Score=59.75 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=47.6
Q ss_pred EEEecCceeeeeEEEEeCCC-CCCCCceEEEEEcCCCcc-cc-cChHHHHHHHHHHHhCCCCceEEEEECCe----eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAK-NNGLARNVLVRIYGEGVE-VF-FNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~-~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e 112 (267)
...|..|..+.||+++.-.. ..+.+..+.+|+...... .. ..-.+|+++++.+.++--..++++.+.++ +|+|
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E 119 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITE 119 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeeh
Confidence 35567777899999863210 011245788888653321 11 11136888888886554344566655432 8899
Q ss_pred eecCCCC
Q 024452 113 FIHARTL 119 (267)
Q Consensus 113 ~i~G~~l 119 (267)
|++|..+
T Consensus 120 ~~~~g~L 126 (375)
T cd05104 120 YCCYGDL 126 (375)
T ss_pred hccCCcH
Confidence 9998765
No 265
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.44 E-value=0.00073 Score=58.67 Aligned_cols=29 Identities=24% Similarity=0.233 Sum_probs=25.5
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 150 ~i~H~dlkp~Nili~~-~~~~~l~dfg~~~ 178 (296)
T cd05095 150 NFVHRDLATRNCLVGK-NYTIKIADFGMSR 178 (296)
T ss_pred CeecccCChheEEEcC-CCCEEeccCcccc
Confidence 5899999999999986 4679999999875
No 266
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.44 E-value=0.0016 Score=55.80 Aligned_cols=153 Identities=12% Similarity=0.041 Sum_probs=78.7
Q ss_pred EEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEe
Q 024452 41 IPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEF 113 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~ 113 (267)
..+..|....+|++...... ......+.+|+....... .....+|+++++.+...++ .+++..+.. .++++|
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~ 89 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI-VKFYGVCTEGDPPIMVFEY 89 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCc-hheeeEEecCCCeEEEEec
Confidence 44566767899998653210 113467889987543221 1122468888877754443 334444432 288999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|.++.. ....-+.....++.... .... -....+..+.. .+...+..+-
T Consensus 90 ~~~~~L~~-------~i~~~~~~~~~~~~~~~-~~~~-l~~~~~~~~~~-----------------~i~~~l~~lH---- 139 (280)
T cd05049 90 MEHGDLNK-------FLRSHGPDAAFLKSPDS-PMGE-LTLSQLLQIAV-----------------QIASGMVYLA---- 139 (280)
T ss_pred CCCCCHHH-------HHHhcCCchhhhccccc-cccc-ccHHHHHHHHH-----------------HHHHHHHHHh----
Confidence 99876642 11111111111110000 0000 00011111111 1122222221
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++.+ +.+.|+||..+.
T Consensus 140 ----~~~i~h~dlkp~nili~~~-~~~kl~d~g~~~ 170 (280)
T cd05049 140 ----SQHFVHRDLATRNCLVGYD-LVVKIGDFGMSR 170 (280)
T ss_pred ----hCCeeccccccceEEEcCC-CeEEECCcccce
Confidence 2358999999999999874 689999998664
No 267
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.43 E-value=0.0016 Score=56.11 Aligned_cols=29 Identities=21% Similarity=0.181 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 130 ~iiH~dlkp~Nil~~~~-~~~kl~Dfg~~~ 158 (290)
T cd07862 130 RVVHRDLKPQNILVTSS-GQIKLADFGLAR 158 (290)
T ss_pred CeeeCCCCHHHEEEcCC-CCEEEccccceE
Confidence 48999999999999874 689999998764
No 268
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.43 E-value=0.00088 Score=58.39 Aligned_cols=29 Identities=28% Similarity=0.263 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 158 ~ivH~dlkp~Nill~~~-~~~kl~DfG~~~ 186 (304)
T cd05096 158 NFVHRDLATRNCLVGEN-LTIKIADFGMSR 186 (304)
T ss_pred CccccCcchhheEEcCC-ccEEECCCccce
Confidence 48999999999999974 679999998774
No 269
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.43 E-value=0.00054 Score=61.29 Aligned_cols=155 Identities=14% Similarity=0.063 Sum_probs=89.8
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCC--c-ccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEG--V-EVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~--~-~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
.+.|..|--..||+-.... .+..+.+|.-... . +...+...|+.+++.+..-. .-.++.+.. +. +|||
T Consensus 15 ~~~iG~GsfavVykg~h~~----~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~n-IV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 15 SREIGSGSFAVVYKGRHKK----SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPN-IVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred hhhccCcceEEEEEeEecc----CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcc-eeeEEEEEecCCeEEEEEE
Confidence 3458889999999998764 2466667654433 1 12222358999999888322 223344433 22 8999
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|.+|..+... + |+... . .....+.|+.++ ...++.|.+
T Consensus 90 yC~gGDLs~y-------i----------~~~~~-----l-~e~t~r~Fm~QL-----------------A~alq~L~~-- 127 (429)
T KOG0595|consen 90 YCNGGDLSDY-------I----------RRRGR-----L-PEATARHFMQQL-----------------ASALQFLHE-- 127 (429)
T ss_pred eCCCCCHHHH-------H----------HHcCC-----C-CHHHHHHHHHHH-----------------HHHHHHHHH--
Confidence 9998776531 1 11110 0 012334454432 233344443
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCC-CC----CEEEEeecccCc-chHhHH--HHhhhhhheee
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEE-TS----SITIIVSFTFLQ-NMLNFK--RACTKILLILT 247 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~-~~----~v~lIDwE~a~~-~~~~fD--~A~~~~~~~~~ 247 (267)
..++|+|++|.|||+... +. .+.|=||.+|.+ .+..+- .....++|.|.
T Consensus 128 ------~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPE 184 (429)
T KOG0595|consen 128 ------NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPE 184 (429)
T ss_pred ------CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHH
Confidence 349999999999999863 12 367999999986 444443 23344444443
No 270
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.43 E-value=0.00077 Score=57.39 Aligned_cols=134 Identities=13% Similarity=0.095 Sum_probs=73.0
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEEEeecC
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFNRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVEEFIHA 116 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~e~i~G 116 (267)
.|..|..+.+|++.... .+..+++|+....... .....+|..+++.+..-++.+ .+... .+. ++++|++|
T Consensus 16 ~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~-~~~~~~~~~~~~lv~e~~~~ 90 (267)
T cd06645 16 RIGSGTYGDVYKARNVN----TGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVA-YFGSYLRRDKLWICMEFCGG 90 (267)
T ss_pred HhCCCCCeEEEEEEEcC----CCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeee-EEEEEEeCCEEEEEEeccCC
Confidence 45667778999987543 3578888886543221 111235677766664433332 33322 222 78899887
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
..+.. ... + . .. .+ ...+..+.. .+...+..+.+
T Consensus 91 ~~L~~-------~~~-------~---~----~~-~~-~~~~~~~~~-----------------~i~~~l~~lH~------ 124 (267)
T cd06645 91 GSLQD-------IYH-------V---T----GP-LS-ESQIAYVSR-----------------ETLQGLYYLHS------ 124 (267)
T ss_pred CcHHH-------HHH-------h---c----CC-CC-HHHHHHHHH-----------------HHHHHHHHHHH------
Confidence 66542 110 0 0 00 00 011111111 12223333322
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 125 --~~i~H~dlkp~nili~~~-~~~~l~dfg~~~ 154 (267)
T cd06645 125 --KGKMHRDIKGANILLTDN-GHVKLADFGVSA 154 (267)
T ss_pred --CCeecCCCCHHHEEECCC-CCEEECcceeee
Confidence 248999999999999864 679999998763
No 271
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.43 E-value=0.001 Score=58.53 Aligned_cols=29 Identities=21% Similarity=0.336 Sum_probs=25.0
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|+||+++.+ +.+.|+||+.+.
T Consensus 145 ~i~H~dL~p~Nil~~~~-~~~kl~dfg~~~ 173 (317)
T cd06635 145 NMIHRDIKAGNILLTEP-GQVKLADFGSAS 173 (317)
T ss_pred CcccCCCCcccEEECCC-CCEEEecCCCcc
Confidence 48999999999999874 679999998654
No 272
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.42 E-value=0.00079 Score=58.35 Aligned_cols=136 Identities=17% Similarity=0.119 Sum_probs=75.4
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc----ccC--hHHHHHHHHHHHhCCCCceEEEEE--CCe--e
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV----FFN--RDDEIRTFECMSSQGQGPRLLGRF--GDG--R 109 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~----~~d--r~~E~~~~~~l~~~gl~P~v~~~~--~~~--~ 109 (267)
...|..|..+.+|++.... .+..+.+|........ ..+ -..|+++++.+...++.+ +++.. .+. +
T Consensus 5 ~~~lg~g~~~~vy~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~l 79 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKE----TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIG-LLDVFGHKSNINL 79 (298)
T ss_pred eeeeeeccccEEEEEEECC----CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChh-hhheeecCCEEEE
Confidence 3456778788999997542 3578899887543211 111 135777777776555544 33332 222 8
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
|++|+ |..+.. .+ +.... ... ...+..+.. .+.+.+..|.
T Consensus 80 v~e~~-~~~L~~--------------~i---~~~~~----~~~-~~~~~~~~~-----------------qi~~al~~lH 119 (298)
T cd07841 80 VFEFM-ETDLEK--------------VI---KDKSI----VLT-PADIKSYML-----------------MTLRGLEYLH 119 (298)
T ss_pred EEccc-CCCHHH--------------HH---hccCC----CCC-HHHHHHHHH-----------------HHHHHHHHHH
Confidence 89998 433321 11 11110 011 111222221 1222333332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
. ..++|+|++|+||+++.+ +.+.|+||..+.
T Consensus 120 ~--------~~i~H~dl~p~nill~~~-~~~~l~dfg~~~ 150 (298)
T cd07841 120 S--------NWILHRDLKPNNLLIASD-GVLKLADFGLAR 150 (298)
T ss_pred h--------CCeeecCCChhhEEEcCC-CCEEEccceeee
Confidence 2 248999999999999974 689999998764
No 273
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.42 E-value=0.00084 Score=65.55 Aligned_cols=138 Identities=15% Similarity=0.154 Sum_probs=78.9
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccc-cChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVF-FNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v 110 (267)
-+..|..|....||++.... .+..|.+|+..... ... .....|..+++.+....+ .+++.... +. +|
T Consensus 8 i~~~LG~G~fg~Vy~a~~~~----~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-v~~~~~~~~~~~~~lV 82 (669)
T cd05610 8 IVKPISRGAFGKVYLGRKKN----NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFI-VHLYYSLQSANNVYLV 82 (669)
T ss_pred EEEEEecCCCeEEEEEEECC----CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCc-CeEEEEEEECCEEEEE
Confidence 45677778788999998643 35788999875421 111 111356666666544333 34444432 22 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|++|..+.. + +.+.+.. .. .....+.. .+...++.|-.
T Consensus 83 mEy~~g~~L~~-------l-------i~~~~~l-------~~--~~~~~i~~-----------------qil~aL~yLH~ 122 (669)
T cd05610 83 MEYLIGGDVKS-------L-------LHIYGYF-------DE--EMAVKYIS-----------------EVALALDYLHR 122 (669)
T ss_pred EeCCCCCCHHH-------H-------HHhcCCC-------CH--HHHHHHHH-----------------HHHHHHHHHHh
Confidence 99998865532 1 1111100 00 11111211 12222333321
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|++|.|||++.+ +.+.|+||..+..
T Consensus 123 --------~gIiHrDLKP~NILl~~~-g~vkL~DFGls~~ 153 (669)
T cd05610 123 --------HGIIHRDLKPDNMLISNE-GHIKLTDFGLSKV 153 (669)
T ss_pred --------CCEEeCCccHHHEEEcCC-CCEEEEeCCCCcc
Confidence 259999999999999874 6899999998864
No 274
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.42 E-value=0.002 Score=54.61 Aligned_cols=137 Identities=16% Similarity=0.122 Sum_probs=75.9
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEee
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFI 114 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i 114 (267)
-...+..|....+|.+.... ...+.+|..........+-.+|..+++.+...++ +++++.... .+++||+
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~-----~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 8 FLKELGTGQFGVVKYGKWRG-----QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKL-VQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred EeeEecCcccceEEEEEecC-----CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCe-eeEEEEEccCCCcEEEEEcC
Confidence 34567778788999987532 3468888765432111111367777777654333 455655432 2889998
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. .. +..... .. ...+..+.. .+...+..+-
T Consensus 82 ~~~~l~~-------~i----------~~~~~~----~~-~~~~~~~~~-----------------~i~~~l~~lH----- 117 (256)
T cd05113 82 SNGCLLN-------YL----------REHGKR----FQ-PSQLLEMCK-----------------DVCEGMAYLE----- 117 (256)
T ss_pred CCCcHHH-------HH----------HhcCCC----CC-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 8765431 01 010000 00 111111211 1222223332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.++||+.+.
T Consensus 118 ---~~~i~H~dl~p~nili~~~-~~~kl~d~g~~~ 148 (256)
T cd05113 118 ---SKQFIHRDLAARNCLVDDQ-GCVKVSDFGLSR 148 (256)
T ss_pred ---hCCeeccccCcceEEEcCC-CCEEECCCccce
Confidence 2248999999999999874 679999998654
No 275
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.42 E-value=0.0015 Score=56.09 Aligned_cols=29 Identities=14% Similarity=0.174 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|+||+++++ +.+.|+||..+.
T Consensus 124 ~i~h~dlkp~nil~~~~-~~~kl~dfg~~~ 152 (283)
T cd06617 124 SVIHRDVKPSNVLINRN-GQVKLCDFGISG 152 (283)
T ss_pred CeecCCCCHHHEEECCC-CCEEEeeccccc
Confidence 58999999999999874 689999998765
No 276
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.42 E-value=0.00065 Score=57.66 Aligned_cols=137 Identities=15% Similarity=0.098 Sum_probs=74.4
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEEEee
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVEEFI 114 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~e~i 114 (267)
..|..|....+|++.... .+..+++|........ ...-.+|+.+++.+....+ ++++... .+. ++++|+
T Consensus 7 ~~ig~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 7 GELGAGNSGVVSKVLHRP----TGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYI-VGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred HHhcCCCCeEEEEEEEcC----CCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCch-hhhheeeecCCEEEEEEEec
Confidence 345667778899998643 3577888876543211 1111356666666553233 3333332 222 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. ... + +. .+. + ...+..+.. .+...+..+
T Consensus 82 ~~~~L~~-------~~~-------~-~~--~~~---~--~~~~~~~~~-----------------~l~~~l~~l------ 116 (265)
T cd06605 82 DGGSLDK-------ILK-------E-VQ--GRI---P--ERILGKIAV-----------------AVLKGLTYL------ 116 (265)
T ss_pred CCCcHHH-------HHH-------H-cc--CCC---C--HHHHHHHHH-----------------HHHHHHHHH------
Confidence 9876642 111 0 00 000 0 011111111 111222222
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..+..++|+|++|+||++++ ++.+.|+||..+.
T Consensus 117 -H~~~~i~H~dl~~~ni~~~~-~~~~~l~d~g~~~ 149 (265)
T cd06605 117 -HEKHKIIHRDVKPSNILVNS-RGQIKLCDFGVSG 149 (265)
T ss_pred -cCCCCeecCCCCHHHEEECC-CCCEEEeecccch
Confidence 22356999999999999997 4689999998764
No 277
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.42 E-value=0.00097 Score=57.12 Aligned_cols=136 Identities=15% Similarity=0.181 Sum_probs=74.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccc-cChHHHHHHHHHHHhCCCCceEEEEE-CC--e---eE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVF-FNRDDEIRTFECMSSQGQGPRLLGRF-GD--G---RV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~-~~--~---~v 110 (267)
+..+..|..+.+|++.... .+..+++|...... ... .+..+|+.+++.+....+.+ +++.. .. + ++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~~~lv 78 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKK----TGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVR-LKEIVTSKGKGSIYMV 78 (287)
T ss_pred eEEeccCCCeEEEEEEECC----CCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeee-heeeEecCCCCcEEEE
Confidence 4556777789999997643 35788888875432 111 12246788888776444433 33322 22 2 77
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|+++ .+. ..+. ....+ .. ...+..+.. .+.+.++.|..
T Consensus 79 ~e~~~~-~l~--------------~~~~---~~~~~----~~-~~~~~~i~~-----------------~i~~al~~LH~ 118 (287)
T cd07840 79 FEYMDH-DLT--------------GLLD---SPEVK----FT-ESQIKCYMK-----------------QLLEGLQYLHS 118 (287)
T ss_pred eccccc-cHH--------------HHHh---ccCCC----CC-HHHHHHHHH-----------------HHHHHHHHHHH
Confidence 888865 211 1110 10000 00 011111211 12222333322
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.+.||..+.
T Consensus 119 --------~~~~h~dl~p~nil~~~~-~~~~l~d~g~~~ 148 (287)
T cd07840 119 --------NGILHRDIKGSNILINND-GVLKLADFGLAR 148 (287)
T ss_pred --------CCceeccCcHHHeEEcCC-CCEEEcccccee
Confidence 248999999999999974 689999998665
No 278
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=97.41 E-value=0.001 Score=62.57 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=27.2
Q ss_pred cEEEEccCCCCCCeeeeCCC-CCEEEEeecccCc
Q 024452 198 EIGFCHNDLQYGNIMIDEET-SSITIIVSFTFLQ 230 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~-~~v~lIDwE~a~~ 230 (267)
...+||+||+|.|||+.+.+ ..|.||||.-|+.
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 35699999999999997543 3699999998875
No 279
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.41 E-value=0.0029 Score=54.07 Aligned_cols=80 Identities=20% Similarity=0.214 Sum_probs=48.8
Q ss_pred EEEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCccc-cc-ChHHHHHHHHHHHhCCCCceEEEEECC----eeEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVEV-FF-NRDDEIRTFECMSSQGQGPRLLGRFGD----GRVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~~-~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~ 111 (267)
.+..+..|..+.+|++...... ......+.+|........ .. ....|+++++.+...++ ++++..+.+ .+++
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~ 87 (275)
T cd05046 9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNV-VRLLGLCREAEPHYMIL 87 (275)
T ss_pred eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcce-eeeEEEECCCCcceEEE
Confidence 4566777777899999853211 112456788877543322 11 12478888888855444 456655543 2889
Q ss_pred EeecCCCC
Q 024452 112 EFIHARTL 119 (267)
Q Consensus 112 e~i~G~~l 119 (267)
+|++|.++
T Consensus 88 e~~~~~~L 95 (275)
T cd05046 88 EYTDLGDL 95 (275)
T ss_pred EecCCCcH
Confidence 99987655
No 280
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.41 E-value=0.00093 Score=60.24 Aligned_cols=29 Identities=21% Similarity=0.334 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 123 ~ivH~dlkp~Nili~~~-~~~kL~Dfg~a~ 151 (372)
T cd07853 123 GILHRDIKPGNLLVNSN-CVLKICDFGLAR 151 (372)
T ss_pred CeeCCCCChHHEEECCC-CCEEecccccee
Confidence 48999999999999874 689999998764
No 281
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.41 E-value=0.004 Score=57.01 Aligned_cols=81 Identities=12% Similarity=0.023 Sum_probs=48.2
Q ss_pred EEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECCe----eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e 112 (267)
...|..|....||+++..... ......+.+|........ ...-.+|+++++.+..+--.+++++.+.+. +|+|
T Consensus 42 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 121 (400)
T cd05105 42 GRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITE 121 (400)
T ss_pred hheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEE
Confidence 345677777899998742110 011246888887543211 111136888888886554445666665432 8899
Q ss_pred eecCCCCC
Q 024452 113 FIHARTLS 120 (267)
Q Consensus 113 ~i~G~~l~ 120 (267)
|++|.++.
T Consensus 122 y~~~g~L~ 129 (400)
T cd05105 122 YCFYGDLV 129 (400)
T ss_pred ecCCCcHH
Confidence 99987663
No 282
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=97.41 E-value=0.00083 Score=56.38 Aligned_cols=132 Identities=13% Similarity=0.072 Sum_probs=73.2
Q ss_pred cCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc---ccC-hHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEeec
Q 024452 44 KGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV---FFN-RDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFIH 115 (267)
Q Consensus 44 ~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~---~~d-r~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i~ 115 (267)
..|....+|++.... .+..+++|+....... ..+ ...|..+++.+...++.+ ++.... +. ++++|++
T Consensus 2 g~G~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~v~e~~~ 76 (250)
T cd05123 2 GKGSFGKVLLVRKKD----TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVK-LHYAFQTEEKLYLVLEYAP 76 (250)
T ss_pred CCCCceEEEEEEECC----CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHH-HHHHeecCCeeEEEEecCC
Confidence 345567999987542 3578899987654211 111 146777777776444433 333322 22 7899998
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++.. .+.+... .. ...+..+.. .+.+.+..+.+
T Consensus 77 ~~~L~~--------------~l~~~~~--------l~-~~~~~~~~~-----------------qi~~~l~~lh~----- 111 (250)
T cd05123 77 GGELFS--------------HLSKEGR--------FS-EERARFYAA-----------------EIVLALEYLHS----- 111 (250)
T ss_pred CCcHHH--------------HHHhcCC--------CC-HHHHHHHHH-----------------HHHHHHHHHHH-----
Confidence 755421 0111000 00 011111211 12222233321
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+||+++.+ +.+.++||+.+.
T Consensus 112 ---~~~~H~~l~p~ni~~~~~-~~~~l~d~~~~~ 141 (250)
T cd05123 112 ---LGIIYRDLKPENILLDAD-GHIKLTDFGLAK 141 (250)
T ss_pred ---CCceecCCCcceEEEcCC-CcEEEeecCcce
Confidence 448999999999999874 689999998764
No 283
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.41 E-value=0.00084 Score=60.75 Aligned_cols=81 Identities=14% Similarity=0.072 Sum_probs=48.6
Q ss_pred EEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCcc-ccc-ChHHHHHHHHHHHhCCCCceEEEEECCe----eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVE-VFF-NRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~-~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e 112 (267)
...|..|....||++...... ......+.+|....... ... .-.+|+++++.+..+.-.+++++.+..+ +++|
T Consensus 43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~e 122 (374)
T cd05106 43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITE 122 (374)
T ss_pred hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHh
Confidence 456677778899998742111 11234688887654321 111 1136888888885554455566655432 7899
Q ss_pred eecCCCCC
Q 024452 113 FIHARTLS 120 (267)
Q Consensus 113 ~i~G~~l~ 120 (267)
|++|..+.
T Consensus 123 y~~~g~L~ 130 (374)
T cd05106 123 YCCYGDLL 130 (374)
T ss_pred hccCCcHH
Confidence 99987654
No 284
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.41 E-value=0.0013 Score=61.49 Aligned_cols=132 Identities=16% Similarity=0.130 Sum_probs=74.2
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC-Ce---eEEEee
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG-DG---RVEEFI 114 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~v~e~i 114 (267)
-...|..|....||++.... .+..+++|..... ...+|+++++.+...++.. ++.... ++ ++++++
T Consensus 173 i~~~Lg~G~~G~Vy~a~~~~----~~~~vavK~~~~~-----~~~~E~~iL~~L~HpnIv~-l~~~~~~~~~~~lv~e~~ 242 (461)
T PHA03211 173 IHRALTPGSEGCVFESSHPD----YPQRVVVKAGWYA-----SSVHEARLLRRLSHPAVLA-LLDVRVVGGLTCLVLPKY 242 (461)
T ss_pred EEEEEccCCCeEEEEEEECC----CCCEEEEeccccc-----CHHHHHHHHHHCCCCCCCc-EEEEEEECCEEEEEEEcc
Confidence 34556777789999998653 3567888853211 1247999999887655543 444332 22 677776
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
.|. + ...+. ...+ + .. ...+..+..+ +...+..|-
T Consensus 243 ~~~-L----------~~~l~---~~~~----~----l~-~~~~~~i~~q-----------------i~~aL~yLH----- 277 (461)
T PHA03211 243 RSD-L----------YTYLG---ARLR----P----LG-LAQVTAVARQ-----------------LLSAIDYIH----- 277 (461)
T ss_pred CCC-H----------HHHHH---hcCC----C----CC-HHHHHHHHHH-----------------HHHHHHHHH-----
Confidence 541 1 11110 0000 0 01 1112222211 122223332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 278 ---~~gIvHrDLKP~NILl~~~-~~vkL~DFGla~ 308 (461)
T PHA03211 278 ---GEGIIHRDIKTENVLVNGP-EDICLGDFGAAC 308 (461)
T ss_pred ---HCCEEECcCCHHHEEECCC-CCEEEcccCCce
Confidence 2348999999999999874 679999999764
No 285
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=97.41 E-value=0.00052 Score=60.52 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=28.9
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..+||+|++|.|+|+|++.+.+.|-||.-|..
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 56999999999999999888899999998754
No 286
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.39 E-value=0.0018 Score=55.05 Aligned_cols=141 Identities=15% Similarity=0.125 Sum_probs=74.8
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC--e--eEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e 112 (267)
....+..|....+|++..... ++....+.+|........ ..+...|..+++.+...+ ..++++...+ . +++|
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e 86 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMP-GRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN-IIRLEGVVTKFKPAMIITE 86 (268)
T ss_pred EeeEecCCCCccEEEEEEecC-CCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCC-eeEEEEEEccCCCcEEEEE
Confidence 345567777889999986431 112246778876543211 111134666665554333 2344554432 1 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|..+.. . +.+ |... . .......+.. .+...+..+-+
T Consensus 87 ~~~~~~L~~-------~-------~~~-~~~~------~-~~~~~~~~~~-----------------~l~~al~~lH~-- 125 (268)
T cd05063 87 YMENGALDK-------Y-------LRD-HDGE------F-SSYQLVGMLR-----------------GIAAGMKYLSD-- 125 (268)
T ss_pred cCCCCCHHH-------H-------HHh-cCCC------C-CHHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 998865532 0 110 1100 0 0111112221 12222233321
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.++||..+.
T Consensus 126 ------~~i~H~dlkp~Nili~~~-~~~kl~dfg~~~ 155 (268)
T cd05063 126 ------MNYVHRDLAARNILVNSN-LECKVSDFGLSR 155 (268)
T ss_pred ------CCeeccccchhhEEEcCC-CcEEECCCccce
Confidence 248999999999999874 678999998764
No 287
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=97.39 E-value=0.001 Score=57.67 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=25.3
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|+||+++++ +.+.|.||..+.
T Consensus 136 ~i~H~dl~p~nili~~~-~~~kl~dfg~~~ 164 (302)
T cd07864 136 NFLHRDIKCSNILLNNK-GQIKLADFGLAR 164 (302)
T ss_pred CeecCCCCHHHEEECCC-CcEEeCcccccc
Confidence 48999999999999874 679999998775
No 288
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.39 E-value=0.0017 Score=56.26 Aligned_cols=139 Identities=16% Similarity=0.085 Sum_probs=76.3
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--ccc-ChHHHHHHHHHHHhCCCCceEEEEECCe----eEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFF-NRDDEIRTFECMSSQGQGPRLLGRFGDG----RVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~ 111 (267)
....|..|..+.+|++.... ++..+++|....... ... ...+|+++++.+..-+ .++++....++ +|+
T Consensus 6 ~~~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 6 KVEKIGEGTYGVVYKARDRV----TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN-IVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred EEEEecCCCCEEEEEEEecC----CCcEEEEEehhhccccccchHHHHHHHHHHHhccCCC-EeeEEEEEecCCeEEEEE
Confidence 35667778889999997543 357899998643211 111 1236888888775433 34455554322 788
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++| .+. . .+..-.. .. .....+..+.. .+...++.|-+
T Consensus 81 e~~~~-~l~----------~----~~~~~~~----~~---~~~~~~~~~~~-----------------qi~~aL~~LH~- 120 (294)
T PLN00009 81 EYLDL-DLK----------K----HMDSSPD----FA---KNPRLIKTYLY-----------------QILRGIAYCHS- 120 (294)
T ss_pred ecccc-cHH----------H----HHHhCCC----CC---cCHHHHHHHHH-----------------HHHHHHHHHHh-
Confidence 98754 111 0 1110000 00 00111222221 12222233321
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++.+++.+.+.||+.+.
T Consensus 121 -------~~i~H~dl~p~nill~~~~~~~kl~dfg~~~ 151 (294)
T PLN00009 121 -------HRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151 (294)
T ss_pred -------CCeeCCCCCcceEEEECCCCEEEEccccccc
Confidence 2489999999999998644568899998774
No 289
>PTZ00284 protein kinase; Provisional
Probab=97.39 E-value=0.0013 Score=61.30 Aligned_cols=53 Identities=13% Similarity=-0.029 Sum_probs=34.0
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCC
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQG 96 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~g 96 (267)
+..|..|-...||++.... .+..+.+|+.........+...|.++++.+....
T Consensus 134 ~~~lG~G~fg~V~~a~~~~----~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~ 186 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRK----RKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQAD 186 (467)
T ss_pred EEEEEeccCEEEEEEEEcC----CCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcC
Confidence 4456778789999997542 2467888986432221112246888888877654
No 290
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.39 E-value=0.0013 Score=55.31 Aligned_cols=134 Identities=16% Similarity=0.101 Sum_probs=73.9
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeec
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIH 115 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~ 115 (267)
.+..|....+|++.... +..+.+|........ .....+|+.+++.+...++ ++++....+ .++++|++
T Consensus 2 ~lg~g~~g~v~~~~~~~-----~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~v~e~~~ 75 (251)
T cd05041 2 KIGKGNFGDVYKGVLKG-----NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNI-VKLIGVCVQKQPIYIVMELVP 75 (251)
T ss_pred ccccCCCceEEEEEEeC-----CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-EEEEEEEecCCCeEEEEEcCC
Confidence 35667778999997532 578889986543211 1112357777776654333 344444432 28899988
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++.. .+. .... . .. ...+..+.. .+...+..+.
T Consensus 76 ~~~l~~--------------~l~---~~~~---~-~~-~~~~~~~~~-----------------~~~~~l~~lH------ 110 (251)
T cd05041 76 GGSLLT--------------FLR---KKKN---R-LT-VKKLLQMSL-----------------DAAAGMEYLE------ 110 (251)
T ss_pred CCcHHH--------------HHH---hcCC---C-CC-HHHHHHHHH-----------------HHHHHHHHHH------
Confidence 865521 010 1000 0 00 111111111 1112222222
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 111 --~~~i~h~di~p~nili~~~-~~~~l~d~g~~~ 141 (251)
T cd05041 111 --SKNCIHRDLAARNCLVGEN-NVLKISDFGMSR 141 (251)
T ss_pred --hCCEehhhcCcceEEEcCC-CcEEEeeccccc
Confidence 2358999999999999874 689999998764
No 291
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.38 E-value=0.0015 Score=55.64 Aligned_cols=31 Identities=32% Similarity=0.294 Sum_probs=26.6
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|+++.||+++++ +.+.++||..+..
T Consensus 133 ~~i~H~dl~~~nil~~~~-~~~~l~dfg~~~~ 163 (269)
T cd08528 133 KRIVHRDLTPNNIMLGED-DKVTITDFGLAKQ 163 (269)
T ss_pred CceeecCCCHHHEEECCC-CcEEEecccceee
Confidence 358999999999999874 6899999998753
No 292
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.38 E-value=0.0013 Score=59.67 Aligned_cols=142 Identities=18% Similarity=0.126 Sum_probs=82.9
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----c-ccc-ChHHHHHHHHHHHhCCCCceEEEEEC--Ce-
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----E-VFF-NRDDEIRTFECMSSQGQGPRLLGRFG--DG- 108 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~-~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~--~~- 108 (267)
.-...+..|--+.|+...... .+..+.+|+..... . ... ...+|+.+++.+..+.---+++.+.. ..
T Consensus 20 ~~~~~lG~GsfgkV~~a~~~~----t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 20 ELGRTLGSGSFGKVKLAKHRL----TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred eeeeeecCCCCeeEEEeeecc----CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 345667888888999986543 24788888765531 1 111 22479989988885532233333332 22
Q ss_pred -eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHH
Q 024452 109 -RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISM 187 (267)
Q Consensus 109 -~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (267)
+|+||..|..+- ..+.+ +... .. ...+.|..+ +...++.
T Consensus 96 ~ivmEy~~gGdL~--------------~~i~~-~g~l------~E--~~ar~~F~Q-----------------lisav~y 135 (370)
T KOG0583|consen 96 YIVMEYCSGGDLF--------------DYIVN-KGRL------KE--DEARKYFRQ-----------------LISAVAY 135 (370)
T ss_pred EEEEEecCCccHH--------------HHHHH-cCCC------Ch--HHHHHHHHH-----------------HHHHHHH
Confidence 889998872211 11111 1100 00 122223322 2223333
Q ss_pred HHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcc
Q 024452 188 LEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQN 231 (267)
Q Consensus 188 l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~ 231 (267)
+ +..+++|+|+++.|||++.+.+.+.|+||+++...
T Consensus 136 ~--------H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 136 C--------HSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred H--------HhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 3 33469999999999999974368999999999865
No 293
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.37 E-value=0.0016 Score=56.64 Aligned_cols=79 Identities=15% Similarity=0.101 Sum_probs=44.0
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEECC-e---eEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v~e~ 113 (267)
...|..|....+|++..... +....+.+|....... ...+...|.+++..+..+.-..++++...+ + ++++|
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~ 84 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKD--GLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEY 84 (297)
T ss_pred eeeecCCCcceEEEEEecCC--CCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEe
Confidence 34567777889999875421 1122355665443211 111224678888777554333455555432 2 78999
Q ss_pred ecCCCCC
Q 024452 114 IHARTLS 120 (267)
Q Consensus 114 i~G~~l~ 120 (267)
.++.++.
T Consensus 85 ~~~~~L~ 91 (297)
T cd05089 85 APYGNLL 91 (297)
T ss_pred cCCCcHH
Confidence 8876553
No 294
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.37 E-value=0.001 Score=56.32 Aligned_cols=139 Identities=15% Similarity=0.119 Sum_probs=76.4
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-c-ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-V-FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~ 113 (267)
...+..|..+.+|++.... .+..+++|....... . .-+..+|+..++.+...++ ++++.... +. +++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 6 IEVIGVGATAVVYAAICLP----NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNV-VKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred eeeecCCCCeEEEEEEEcC----CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCE-EEEEEEEeeCCEEEEEEec
Confidence 4456677788999997543 357888888754321 1 1122467777776654333 33343332 22 78899
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|.++.. .+.+.+. ... . .......+.. .+...+..+.
T Consensus 81 ~~~~~l~~--------------~~~~~~~---~~~--~-~~~~~~~~~~-----------------ql~~al~~lh---- 119 (267)
T cd06610 81 LSGGSLLD--------------IMKSSYP---RGG--L-DEAIIATVLK-----------------EVLKGLEYLH---- 119 (267)
T ss_pred cCCCcHHH--------------HHHHhcc---cCC--C-CHHHHHHHHH-----------------HHHHHHHHHH----
Confidence 88765432 1111111 000 0 0111222221 1222223332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 120 ----~~~i~h~~l~p~ni~~~~~-~~~~l~df~~~~ 150 (267)
T cd06610 120 ----SNGQIHRDIKAGNILLGED-GSVKIADFGVSA 150 (267)
T ss_pred ----hCCeecCCCCHHhEEEcCC-CCEEEcccchHH
Confidence 2348999999999999974 679999998764
No 295
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.37 E-value=0.0021 Score=54.85 Aligned_cols=140 Identities=14% Similarity=0.079 Sum_probs=74.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-c-ccChHHHHHHHHHHHhCCCCceEEEEECCe----eEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-V-FFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e~ 113 (267)
...+..|..+.+|++..... +.....+.+|....... . ...-..|..+++.+..-++ .+++....++ +++||
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~ 86 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLP-GKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNI-IHLEGVVTKSRPVMIITEF 86 (269)
T ss_pred EeEecCCCCCeEEEEEEecC-CCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCc-ceEEEEECCCCceEEEEec
Confidence 34456777789999876431 11124688888754321 1 1111356777766644333 3445544322 78999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|.++.. ... ... . ... ...+..+.. .+...+..+-
T Consensus 87 ~~~~~L~~-------~l~----------~~~--~--~~~-~~~~~~i~~-----------------~l~~al~~lH---- 123 (269)
T cd05065 87 MENGALDS-------FLR----------QND--G--QFT-VIQLVGMLR-----------------GIAAGMKYLS---- 123 (269)
T ss_pred CCCCcHHH-------HHh----------hCC--C--CCC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 98765531 110 000 0 001 111111211 1122223332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 124 ----~~g~~H~dl~p~nili~~~-~~~kl~dfg~~~ 154 (269)
T cd05065 124 ----EMNYVHRDLAARNILVNSN-LVCKVSDFGLSR 154 (269)
T ss_pred ----HCCEeecccChheEEEcCC-CcEEECCCcccc
Confidence 2358999999999999874 678999998663
No 296
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=97.37 E-value=0.0022 Score=54.34 Aligned_cols=29 Identities=21% Similarity=0.146 Sum_probs=24.9
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|.||..+.
T Consensus 115 ~i~H~dlkp~nill~~~-~~~kl~Dfg~~~ 143 (257)
T cd05116 115 NFVHRDLAARNVLLVTQ-HYAKISDFGLSK 143 (257)
T ss_pred CEeecccchhhEEEcCC-CeEEECCCcccc
Confidence 48999999999999874 678999998764
No 297
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.37 E-value=0.0027 Score=55.32 Aligned_cols=81 Identities=15% Similarity=0.116 Sum_probs=48.9
Q ss_pred EEEecCceeeeeEEEEeCC---CCCCCCceEEEEEcCCCc--ccccChHHHHHHHHHHHhCCCCceEEEEECC----eeE
Q 024452 40 VIPLKGAMTNEVYQIAWPA---KNNGLARNVLVRIYGEGV--EVFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~---~~~~~~~~~vlRi~~~~~--~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v 110 (267)
..+|..|....||++.... ....++..+++|...... ...-+..+|..+++.+.++.-..++++.+.. .++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 99 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 99 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEE
Confidence 3677788889999986421 001123468888875432 1111224788888888666544555655432 288
Q ss_pred EEeecCCCCC
Q 024452 111 EEFIHARTLS 120 (267)
Q Consensus 111 ~e~i~G~~l~ 120 (267)
++|++|.++.
T Consensus 100 ~e~~~~~~L~ 109 (304)
T cd05101 100 VEYASKGNLR 109 (304)
T ss_pred EecCCCCcHH
Confidence 9999876553
No 298
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=97.36 E-value=0.0015 Score=57.13 Aligned_cols=137 Identities=13% Similarity=0.077 Sum_probs=76.7
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccChHHHHHHHHHHHhCCCCceEEEEE--C--C--ee
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFNRDDEIRTFECMSSQGQGPRLLGRF--G--D--GR 109 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~~~~l~~~gl~P~v~~~~--~--~--~~ 109 (267)
.+..|..|....+|++.... .+..+++|...... .......+|+.+++.+...++. +++... . + .+
T Consensus 11 ~~~~ig~g~~~~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~~~l 85 (309)
T cd07845 11 KLNRIGEGTYGIVYRARDTT----SGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIV-ELKEVVVGKHLDSIFL 85 (309)
T ss_pred EeeeeeecCCEEEEEEEECC----CCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCc-ceEEEEecCCCCeEEE
Confidence 45566788888999998543 35788888764321 1112224688888888765544 344332 2 1 17
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
|++|.+| .+. ..+.+.+ .+ . ....+..+.. .+...+..+.
T Consensus 86 v~e~~~~-~l~--------------~~l~~~~---~~----l-~~~~~~~~~~-----------------qi~~~l~~lH 125 (309)
T cd07845 86 VMEYCEQ-DLA--------------SLLDNMP---TP----F-SESQVKCLML-----------------QLLRGLQYLH 125 (309)
T ss_pred EEecCCC-CHH--------------HHHHhcc---cC----C-CHHHHHHHHH-----------------HHHHHHHHHH
Confidence 7888764 111 1111111 00 0 0111221221 1222333333
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
. ..++|+|++|+||+++++ +.+.|+||..+.
T Consensus 126 ~--------~~i~H~dl~p~nil~~~~-~~~kL~dfg~~~ 156 (309)
T cd07845 126 E--------NFIIHRDLKVSNLLLTDK-GCLKIADFGLAR 156 (309)
T ss_pred h--------CCeecCCCCHHHEEECCC-CCEEECccceee
Confidence 2 238999999999999874 689999998765
No 299
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=97.36 E-value=0.002 Score=57.46 Aligned_cols=57 Identities=11% Similarity=0.054 Sum_probs=36.6
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--ccc-ChHHHHHHHHHHHhCCCC
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFF-NRDDEIRTFECMSSQGQG 98 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~-dr~~E~~~~~~l~~~gl~ 98 (267)
..+..|..|..+.+|++.... .+..+++|....... ... ...+|+++++.+...++.
T Consensus 18 ~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 77 (343)
T cd07880 18 RDLKQVGSGAYGTVCSALDRR----TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVI 77 (343)
T ss_pred EEEEEeeecCCeEEEEEEECC----CCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcc
Confidence 356778888889999997542 357889987643211 111 113688888888655554
No 300
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.35 E-value=0.00023 Score=61.39 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=75.9
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-cc-ccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-EV-FFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~ 113 (267)
+..|..|..+.+|++.... .+..+++|...... .. ...-.+|+.+++.+...++ .+.++.+. +. +++||
T Consensus 6 ~~~ig~g~~g~v~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRP----TGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYI-VDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhcccCCeEEEEEEEcC----CCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcH-HhhhhheecCCeEEEEEee
Confidence 3456778788999998643 35788888654321 11 1111367777776644333 23333221 22 78999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|.++.. +.. .... ... . ....+..+.. .+...+..|.+
T Consensus 81 ~~~~~l~~-------~~~----------~~~~-~~~-~-~~~~~~~~~~-----------------~i~~~l~~LH~--- 120 (286)
T cd06622 81 MDAGSLDK-------LYA----------GGVA-TEG-I-PEDVLRRITY-----------------AVVKGLKFLKE--- 120 (286)
T ss_pred cCCCCHHH-------HHH----------hccc-cCC-C-CHHHHHHHHH-----------------HHHHHHHHHHh---
Confidence 99876532 111 0000 000 0 0011111111 12223333321
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++. ++.+.|+||..+.
T Consensus 121 ----~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~ 151 (286)
T cd06622 121 ----EHNIIHRDVKPTNVLVNG-NGQVKLCDFGVSG 151 (286)
T ss_pred ----cCCEeeCCCCHHHEEECC-CCCEEEeecCCcc
Confidence 235999999999999987 4689999998764
No 301
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=97.35 E-value=0.00076 Score=56.96 Aligned_cols=32 Identities=13% Similarity=0.030 Sum_probs=25.8
Q ss_pred EEEEccCCCCCCeeeeCCCC------CEEEEeecccCc
Q 024452 199 IGFCHNDLQYGNIMIDEETS------SITIIVSFTFLQ 230 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~------~v~lIDwE~a~~ 230 (267)
..++|+|++|.||+++.++. .+.+.||..+..
T Consensus 120 ~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 120 KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred CCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 34899999999999986421 489999998764
No 302
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=97.35 E-value=0.0013 Score=56.59 Aligned_cols=29 Identities=24% Similarity=0.148 Sum_probs=25.2
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++.+ +.+.++||..+.
T Consensus 117 ~i~H~di~p~nili~~~-~~~kl~dfg~~~ 145 (278)
T cd05606 117 FVVYRDLKPANILLDEH-GHVRISDLGLAC 145 (278)
T ss_pred CEEcCCCCHHHEEECCC-CCEEEccCcCcc
Confidence 49999999999999874 679999998764
No 303
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.35 E-value=0.00057 Score=57.69 Aligned_cols=133 Identities=14% Similarity=0.105 Sum_probs=72.9
Q ss_pred cCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---cc-cChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEeec
Q 024452 44 KGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---VF-FNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFIH 115 (267)
Q Consensus 44 ~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i~ 115 (267)
..|....+|++.... .+..+++|+...... .. .....|.+.++.+...++ +++++... +. ++++|++
T Consensus 2 g~g~~~~vy~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~~~ 76 (265)
T cd05579 2 SKGAYGRVFLAKKKS----TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYV-VKLYYSFQGKKNLYLVMEYLP 76 (265)
T ss_pred CCCCceEEEEEEECC----CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcch-hHHHHheecCcEEEEEEecCC
Confidence 456667899998643 357899998754321 11 112356666666653333 22333322 21 7899998
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++.. .. .+... . + ......+..+ +.+.+..+.
T Consensus 77 ~~~L~~-------~l-------~~~~~--~-----~--~~~~~~i~~q-----------------i~~~L~~lH------ 110 (265)
T cd05579 77 GGDLAS-------LL-------ENVGS--L-----D--EDVARIYIAE-----------------IVLALEYLH------ 110 (265)
T ss_pred CCcHHH-------HH-------HHcCC--C-----C--HHHHHHHHHH-----------------HHHHHHHHH------
Confidence 865532 11 11110 0 0 0111112211 222223332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|+|++|.||+++++ +.+.++||..+..
T Consensus 111 --~~~i~H~di~~~nil~~~~-~~~~l~dfg~~~~ 142 (265)
T cd05579 111 --SNGIIHRDLKPDNILIDSN-GHLKLTDFGLSKV 142 (265)
T ss_pred --HcCeecCCCCHHHeEEcCC-CCEEEEecccchh
Confidence 2358999999999999974 6899999987653
No 304
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.34 E-value=0.00045 Score=58.79 Aligned_cols=139 Identities=14% Similarity=0.065 Sum_probs=75.1
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEEE
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVEE 112 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~e 112 (267)
..|..|..+.+|++.... ++..+++|...... ....+...|..+++.+...++.+ ++..+ .+. ++++
T Consensus 8 ~~ig~g~~g~v~~~~~~~----~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~~v~e 82 (267)
T cd08229 8 KKIGRGQFSEVYRATCLL----DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK-YYASFIEDNELNIVLE 82 (267)
T ss_pred hhhcccCCeEEEEEeecC----CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhh-hhheeEeCCeEEEEEE
Confidence 345667778999997542 35788888654311 11111235777777775444433 33332 222 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. ... .+... ... -.......+.. .+...+..|.
T Consensus 83 ~~~~~~L~~-------~~~-------~~~~~---~~~--~~~~~~~~~~~-----------------~i~~~l~~LH--- 123 (267)
T cd08229 83 LADAGDLSR-------MIK-------HFKKQ---KRL--IPEKTVWKYFV-----------------QLCSALEHMH--- 123 (267)
T ss_pred ecCCCCHHH-------HHH-------Hhhcc---CCC--CCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 998876532 111 11000 000 01111222221 1222223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.+.||+.+.
T Consensus 124 -----~~~i~H~dl~p~nili~~~-~~~~l~dfg~~~ 154 (267)
T cd08229 124 -----SRRVMHRDIKPANVFITAT-GVVKLGDLGLGR 154 (267)
T ss_pred -----HCCeecCCCCHHHEEEcCC-CCEEECcchhhh
Confidence 2358999999999999874 679999998653
No 305
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.34 E-value=0.0023 Score=54.05 Aligned_cols=136 Identities=18% Similarity=0.128 Sum_probs=76.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeec
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIH 115 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~ 115 (267)
...+..|....+|++.... +..+.+|+.........+...|.++++.+...++. +++..... .++++|++
T Consensus 9 ~~~ig~g~~g~v~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLE-----KRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLV-QLYGVCTERSPICLVFEFME 82 (256)
T ss_pred EeeecCcccceEEEEEEeC-----CCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCee-eEEEEEccCCceEEEEEcCC
Confidence 4556777778999987532 46788898654321111224688888887654433 34544432 27899998
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++.. .. +.... +-..+....+..+ +...+..+.
T Consensus 83 ~~~L~~-------~~----------~~~~~-----~~~~~~~~~~~~~-----------------l~~~l~~lH------ 117 (256)
T cd05112 83 HGCLSD-------YL----------RAQRG-----KFSQETLLGMCLD-----------------VCEGMAYLE------ 117 (256)
T ss_pred CCcHHH-------HH----------HhCcc-----CCCHHHHHHHHHH-----------------HHHHHHHHH------
Confidence 865431 00 11000 0011112222211 112222332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++. ++.+.++||+.+.
T Consensus 118 --~~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~ 148 (256)
T cd05112 118 --SSNVIHRDLAARNCLVGE-NQVVKVSDFGMTR 148 (256)
T ss_pred --HCCccccccccceEEEcC-CCeEEECCCccee
Confidence 124899999999999986 4678999998764
No 306
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.33 E-value=0.0032 Score=55.18 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=48.2
Q ss_pred EEEEecCceeeeeEEEEeCCCC---CCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEECC-e---e
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKN---NGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFGD-G---R 109 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~---~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~ 109 (267)
-...+..|....+|+++..... ......+.+|+...... .......|..+++.+.++.-..++++.+.+ + +
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV 95 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence 4566788888999999642100 01235677888654321 111124677777777555444556655432 2 7
Q ss_pred EEEeecCCCCC
Q 024452 110 VEEFIHARTLS 120 (267)
Q Consensus 110 v~e~i~G~~l~ 120 (267)
+++|++|.++.
T Consensus 96 v~e~~~~g~L~ 106 (314)
T cd05099 96 IVEYAAKGNLR 106 (314)
T ss_pred EEecCCCCcHH
Confidence 89999887653
No 307
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.33 E-value=0.0018 Score=55.28 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=45.3
Q ss_pred EEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECCe----eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e 112 (267)
...+..|.-+.+|++...... +..+..+.+|+....... .....+|+.+++.+...++ .++++...++ +++|
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~~v~e 89 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHV-VRLLGVVSTGQPTLVVME 89 (277)
T ss_pred EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCce-eEEEEEEcCCCCcEEEEe
Confidence 455677777899998764211 113467889987543211 1111356666665543333 3455554422 7899
Q ss_pred eecCCCCC
Q 024452 113 FIHARTLS 120 (267)
Q Consensus 113 ~i~G~~l~ 120 (267)
|.+|.++.
T Consensus 90 ~~~~~~L~ 97 (277)
T cd05032 90 LMAKGDLK 97 (277)
T ss_pred cCCCCCHH
Confidence 98876653
No 308
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.33 E-value=0.00054 Score=58.81 Aligned_cols=29 Identities=24% Similarity=0.307 Sum_probs=25.0
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++++||++++ .+.+.|.||..+.
T Consensus 119 ~i~H~dl~~~ni~i~~-~~~~~l~d~~~~~ 147 (283)
T cd07830 119 GFFHRDLKPENLLVSG-PEVVKIADFGLAR 147 (283)
T ss_pred CcccCCCChhhEEEcC-CCCEEEeecccce
Confidence 4899999999999997 4789999997653
No 309
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.33 E-value=0.0013 Score=56.61 Aligned_cols=81 Identities=16% Similarity=0.069 Sum_probs=46.0
Q ss_pred EEEEecCceeeeeEEEEeCCC-CCCCCceEEEEEcCCCccc-ccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAK-NNGLARNVLVRIYGEGVEV-FFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~-~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e 112 (267)
-...+..|..+.+|++..... ....+..+.+|........ ..+..+|.++++.+...++. ++++...+ .++++
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e 87 (280)
T cd05092 9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIV-RFYGVCTEGRPLLMVFE 87 (280)
T ss_pred eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCc-eEEEEEecCCceEEEEe
Confidence 355667777889999864210 0112456667765433221 11224678888777554443 34544432 27899
Q ss_pred eecCCCCC
Q 024452 113 FIHARTLS 120 (267)
Q Consensus 113 ~i~G~~l~ 120 (267)
|++|.++.
T Consensus 88 ~~~~~~L~ 95 (280)
T cd05092 88 YMRHGDLN 95 (280)
T ss_pred cCCCCCHH
Confidence 99887654
No 310
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=97.32 E-value=0.0027 Score=54.36 Aligned_cols=136 Identities=18% Similarity=0.194 Sum_probs=75.2
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEEC-C--e---eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFG-D--G---RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~--~---~v~ 111 (267)
+..+..|..+.+|++.... ++..+.+|....... .......|..+++.+..+.-.+++++... + + +|+
T Consensus 4 ~~~lg~g~~~~v~~~~~~~----~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRK----TGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred EeeccccccceEEEEEEcC----CCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 4567777788999997543 357888888754321 12222357777777765543444555432 2 2 778
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|.+|. +. ..+ ..... .-....+..+..+ +...++.|.
T Consensus 80 e~~~~~-l~----------~~l-------~~~~~-----~~~~~~~~~~~~q-----------------i~~~L~~LH-- 117 (282)
T cd07831 80 ELMDMN-LY----------ELI-------KGRKR-----PLPEKRVKSYMYQ-----------------LLKSLDHMH-- 117 (282)
T ss_pred ecCCcc-HH----------HHH-------HhccC-----CCCHHHHHHHHHH-----------------HHHHHHHHH--
Confidence 887652 11 111 00000 0011112222211 222223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||++++ +.+.|.||..+.
T Consensus 118 ------~~~i~H~dl~p~ni~l~~--~~~kl~dfg~~~ 147 (282)
T cd07831 118 ------RNGIFHRDIKPENILIKD--DILKLADFGSCR 147 (282)
T ss_pred ------HCCceecccCHHHEEEcC--CCeEEEeccccc
Confidence 124899999999999986 689999998664
No 311
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=97.32 E-value=0.0014 Score=57.11 Aligned_cols=75 Identities=5% Similarity=-0.041 Sum_probs=45.0
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---cccc-ChHHHHHHHHHHHhCCCCceEEEEECC--e---eE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFF-NRDDEIRTFECMSSQGQGPRLLGRFGD--G---RV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~--~---~v 110 (267)
...|..|..+.+|++..... +.+..+.+|...... .... ...+|+.+++.+..-++.+-.-..... . +|
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~--~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 82 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNG--KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLL 82 (316)
T ss_pred EEEeccCCcEEEEEEEecCC--CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEE
Confidence 34577788899999985421 135789999876532 1111 124688888887655554432222222 2 78
Q ss_pred EEeecC
Q 024452 111 EEFIHA 116 (267)
Q Consensus 111 ~e~i~G 116 (267)
+||+++
T Consensus 83 ~e~~~~ 88 (316)
T cd07842 83 FDYAEH 88 (316)
T ss_pred EeCCCc
Confidence 888765
No 312
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.31 E-value=0.0012 Score=56.72 Aligned_cols=133 Identities=13% Similarity=0.074 Sum_probs=73.2
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-cccc-ChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeec
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-EVFF-NRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIH 115 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~ 115 (267)
.|..|....+|++.... .+..+++|+..... .... ...+|+..++.+...++ ++.+..+.+ .+|+||++
T Consensus 11 ~l~~g~~~~vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 11 RIGKGSFGEVYKGIDNR----TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI-TRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HhcCCCCeeEEEEEEcC----CCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCcc-HhhhcccccCCceEEEEEccC
Confidence 35667778999986532 24678889865332 1111 12467777766654333 334443322 28899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|..+.. .. +... .. ......... .+...+..+-
T Consensus 86 ~~~L~~-------~~----------~~~~------~~-~~~~~~~~~-----------------~i~~~l~~lH------ 118 (277)
T cd06642 86 GGSALD-------LL----------KPGP------LE-ETYIATILR-----------------EILKGLDYLH------ 118 (277)
T ss_pred CCcHHH-------Hh----------hcCC------CC-HHHHHHHHH-----------------HHHHHHHHHh------
Confidence 865431 00 0000 00 011111111 1222222332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.+.||..+.
T Consensus 119 --~~~ivH~dl~p~ni~i~~~-~~~~l~dfg~~~ 149 (277)
T cd06642 119 --SERKIHRDIKAANVLLSEQ-GDVKLADFGVAG 149 (277)
T ss_pred --cCCeeccCCChheEEEeCC-CCEEEccccccc
Confidence 2358999999999999874 679999998764
No 313
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.30 E-value=0.0068 Score=55.26 Aligned_cols=132 Identities=11% Similarity=0.039 Sum_probs=75.1
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEe
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEF 113 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~ 113 (267)
.-+..|..|..+.||++.... .+..+.+|..... .. .+|+++++.+..-++.. ++..+. .. +++++
T Consensus 95 ~~~~~lg~G~~g~V~~~~d~~----~~~~vaiK~~~~~--~~---~~E~~il~~l~HpnIv~-~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 95 SILETFTPGAEGFAFACIDNK----TCEHVVIKAGQRG--GT---ATEAHILRAINHPSIIQ-LKGTFTYNKFTCLILPR 164 (391)
T ss_pred EEEEEEcCCCCeEEEEEEECC----CCCEEEEechhhh--hh---HHHHHHHHhCCCCCCCC-EeEEEEECCeeEEEEec
Confidence 346677888889999997543 3578888864321 12 47999999887655443 444332 21 56666
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
+.|. + .. .+..-+. .. ...+..+.. .+...+..+-
T Consensus 165 ~~~~-L----------~~----~l~~~~~--------l~-~~~~~~i~~-----------------qi~~aL~ylH---- 199 (391)
T PHA03212 165 YKTD-L----------YC----YLAAKRN--------IA-ICDILAIER-----------------SVLRAIQYLH---- 199 (391)
T ss_pred CCCC-H----------HH----HHHhcCC--------CC-HHHHHHHHH-----------------HHHHHHHHHH----
Confidence 5431 1 11 1111000 01 111222221 1222233332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 200 ----~~~IvHrDiKP~NIll~~~-~~vkL~DFG~a~ 230 (391)
T PHA03212 200 ----ENRIIHRDIKAENIFINHP-GDVCLGDFGAAC 230 (391)
T ss_pred ----hCCcccCCCChHhEEEcCC-CCEEEEeCCccc
Confidence 1248999999999999874 689999999874
No 314
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.30 E-value=0.0015 Score=56.28 Aligned_cols=81 Identities=16% Similarity=0.093 Sum_probs=46.4
Q ss_pred EEEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCcc-ccc-ChHHHHHHHHHHHhCCCCceEEEEECC----eeEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVE-VFF-NRDDEIRTFECMSSQGQGPRLLGRFGD----GRVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~-~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~ 111 (267)
....+..|.-+.+|++...... +.....+.+|+...... ... +-.+|+.+++.+...++ .++++...+ .+++
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-v~~~~~~~~~~~~~lv~ 87 (288)
T cd05050 9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNI-VKLLGVCAVGKPMCLLF 87 (288)
T ss_pred ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCch-heEEEEEcCCCccEEEE
Confidence 3456677778899999753200 11346788887654321 111 11357777777644333 345555443 2889
Q ss_pred EeecCCCCC
Q 024452 112 EFIHARTLS 120 (267)
Q Consensus 112 e~i~G~~l~ 120 (267)
+|.+|.++.
T Consensus 88 e~~~~~~L~ 96 (288)
T cd05050 88 EYMAYGDLN 96 (288)
T ss_pred ecCCCCCHH
Confidence 999886553
No 315
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.30 E-value=0.0024 Score=54.10 Aligned_cols=136 Identities=18% Similarity=0.156 Sum_probs=76.7
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeec
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIH 115 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~ 115 (267)
..+..|..+.+|++.... +..+.+|+...... .......|..+++.+...++. ++++...+ .+++||.+
T Consensus 12 ~~ig~g~~~~vy~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKN-----RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLI-SLFAVCSVGEPVYIITELME 85 (261)
T ss_pred hhhccCCCccEEEeEecC-----CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchh-heeeeEecCCCeEEEEeecc
Confidence 445677788999997542 47788888654332 111224677777777543333 34443332 28899999
Q ss_pred CCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCC
Q 024452 116 ARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPND 195 (267)
Q Consensus 116 G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 195 (267)
|.++..- . . ... .. .-....+..+..+ +...+..+.
T Consensus 86 ~~~L~~~-------~-------~---~~~--~~--~~~~~~~~~~~~~-----------------i~~al~~lH------ 121 (261)
T cd05148 86 KGSLLAF-------L-------R---SPE--GQ--VLPVASLIDMACQ-----------------VAEGMAYLE------ 121 (261)
T ss_pred cCCHHHH-------H-------h---cCC--CC--CCCHHHHHHHHHH-----------------HHHHHHHHH------
Confidence 8765421 1 0 000 00 0111122222221 222223332
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.+.||+.+.
T Consensus 122 --~~~i~h~dl~~~nilv~~~-~~~kl~d~g~~~ 152 (261)
T cd05148 122 --EQNSIHRDLAARNILVGED-LVCKVADFGLAR 152 (261)
T ss_pred --HCCeeccccCcceEEEcCC-ceEEEccccchh
Confidence 1248999999999999874 678999999874
No 316
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.29 E-value=0.0063 Score=51.50 Aligned_cols=140 Identities=15% Similarity=0.088 Sum_probs=76.2
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--c-c-ccChHHHHHHHHHHHhCCCCceEEEEEC--C--eeEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--E-V-FFNRDDEIRTFECMSSQGQGPRLLGRFG--D--GRVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~-~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~ 111 (267)
.+.+..|....+|++.... ++..+++|...... . . ...-.+|+.+++.+...++ .+++..+. + .+++
T Consensus 7 ~~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i-~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLL----DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNV-IKYLASFIENNELNIVL 81 (267)
T ss_pred eeeeccCCceEEEEEEEcC----CCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCe-eeeeeeeecCCeEEEEE
Confidence 3556777788999998642 35778888654211 1 1 1111367777777744333 33333322 2 2889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++|.++.. .. ... .. .. ..-.......|..+ +...+..|.
T Consensus 82 e~~~~~~L~~-------~l-------~~~---~~-~~-~~~~~~~~~~~~~~-----------------l~~~l~~lh-- 123 (267)
T cd08224 82 ELADAGDLSR-------MI-------KHF---KK-QK-RLIPERTIWKYFVQ-----------------LCSALEHMH-- 123 (267)
T ss_pred ecCCCCCHHH-------HH-------HHh---cc-cC-CCcCHHHHHHHHHH-----------------HHHHHHHHH--
Confidence 9998865532 11 110 00 00 00011222222221 122223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.++||+.+.
T Consensus 124 ------~~~i~h~dl~p~nil~~~~-~~~~l~d~~~~~ 154 (267)
T cd08224 124 ------SKRIMHRDIKPANVFITAT-GVVKLGDLGLGR 154 (267)
T ss_pred ------hCCEecCCcChhhEEECCC-CcEEEeccceee
Confidence 2358999999999999874 679999998764
No 317
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=97.29 E-value=0.002 Score=56.10 Aligned_cols=135 Identities=15% Similarity=0.154 Sum_probs=76.1
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccc-cChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEEEee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVF-FNRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVEEFI 114 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~e~i 114 (267)
+..|..|..+.+|++.... ++..+++|......... ....+|+.+++.+..-++ ++.+..+ .+. +++||+
T Consensus 25 ~~~lg~g~~g~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 99 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKS----SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-VEMYNSYLVGDELWVVMEFL 99 (292)
T ss_pred HHHcCCCCCeEEEEEEEcC----CCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcch-hheeeEEEeCCEEEEEEecC
Confidence 3457778888999987542 35788888754322111 111357777777654333 3344333 222 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. +.. +. . .. ......+..+ +...+..+.+
T Consensus 100 ~~~~L~~-------~~~---------~~-~------~~-~~~~~~~~~q-----------------l~~~l~~lH~---- 134 (292)
T cd06657 100 EGGALTD-------IVT---------HT-R------MN-EEQIAAVCLA-----------------VLKALSVLHA---- 134 (292)
T ss_pred CCCcHHH-------HHh---------cC-C------CC-HHHHHHHHHH-----------------HHHHHHHHHH----
Confidence 9876532 110 00 0 00 1112222211 2222233322
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++.+ +.+.++||+.+.
T Consensus 135 ----~givH~dl~p~Nilv~~~-~~~~l~dfg~~~ 164 (292)
T cd06657 135 ----QGVIHRDIKSDSILLTHD-GRVKLSDFGFCA 164 (292)
T ss_pred ----CCeecCCCCHHHEEECCC-CCEEEcccccce
Confidence 248999999999999874 679999999763
No 318
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.26 E-value=0.00096 Score=58.30 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=25.7
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.++|+|++|+||+++++ +.+.|.||+.+..
T Consensus 135 ~i~H~dl~p~nIl~~~~-~~~kL~dfg~~~~ 164 (307)
T cd06607 135 ERIHRDIKAGNILLTEP-GTVKLADFGSASL 164 (307)
T ss_pred CceecCCCcccEEECCC-CCEEEeecCccee
Confidence 47999999999999874 6899999987753
No 319
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=97.26 E-value=0.00076 Score=58.65 Aligned_cols=135 Identities=15% Similarity=0.135 Sum_probs=74.5
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEEEee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFNRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVEEFI 114 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~e~i 114 (267)
+..|..|..+.+|++.... .+..+++|........ .....+|+.+++.+..-++.+ .+... .+. +++||+
T Consensus 27 ~~~lg~g~~g~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~-~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKH----TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVD-MYNSYLVGDELWVVMEFL 101 (292)
T ss_pred hhcccCCCCeEEEEEEECC----CCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHH-HHHheecCCeEEEEEeCC
Confidence 5667778788999987532 3578888876432211 111135777776664433322 22222 122 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. ... ... .. ......+.. .+...++.+-+
T Consensus 102 ~~~~L~~-------~~~----------~~~------l~-~~~~~~~~~-----------------qi~~~l~~LH~---- 136 (292)
T cd06658 102 EGGALTD-------IVT----------HTR------MN-EEQIATVCL-----------------SVLRALSYLHN---- 136 (292)
T ss_pred CCCcHHH-------HHh----------cCC------CC-HHHHHHHHH-----------------HHHHHHHHHHH----
Confidence 8865532 110 000 01 111111211 12222333322
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 137 ----~~ivH~dlkp~Nill~~~-~~~kL~dfg~~~ 166 (292)
T cd06658 137 ----QGVIHRDIKSDSILLTSD-GRIKLSDFGFCA 166 (292)
T ss_pred ----CCEeecCCCHHHEEEcCC-CCEEEccCcchh
Confidence 248999999999999874 689999999764
No 320
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=97.26 E-value=0.0013 Score=57.09 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=25.6
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|+||+++++ +.+.++||..+.
T Consensus 135 ~i~H~dl~p~nil~~~~-~~~~l~dfg~~~ 163 (311)
T cd07866 135 HILHRDIKAANILIDNQ-GILKIADFGLAR 163 (311)
T ss_pred CeecCCCCHHHEEECCC-CCEEECcCccch
Confidence 58999999999999874 689999998775
No 321
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.25 E-value=0.0019 Score=55.69 Aligned_cols=137 Identities=16% Similarity=0.082 Sum_probs=78.1
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECCe----eEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e 112 (267)
.+..+..|..+.+|++.... .+..+++|........ .....+|+.+++.+...++. +++....+. +|+|
T Consensus 9 ~~~~lg~g~~~~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 9 KLDKLGEGSYATVYKGRSKL----TGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIV-TLHDIIHTKKTLTLVFE 83 (291)
T ss_pred EEEEEeecCCeEEEEEEEcC----CCcEEEEEEEecccccCCchhHHHHHHHHhhCCCccee-eEEEEEecCCeEEEEEe
Confidence 45677788888999998542 3578999986543211 11113688888888654443 344443321 8899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++| .+.. .+. .... . -.......+.. .+.+.+..+.+
T Consensus 84 ~~~~-~L~~--------------~~~---~~~~--~---~~~~~~~~~~~-----------------ql~~al~~lH~-- 121 (291)
T cd07844 84 YLDT-DLKQ--------------YMD---DCGG--G---LSMHNVRLFLF-----------------QLLRGLAYCHQ-- 121 (291)
T ss_pred cCCC-CHHH--------------HHH---hCCC--C---CCHHHHHHHHH-----------------HHHHHHHHHHh--
Confidence 8865 2211 111 1000 0 01112222221 12223333332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 122 ------~~i~H~dl~p~nil~~~~-~~~kl~dfg~~~ 151 (291)
T cd07844 122 ------RRVLHRDLKPQNLLISER-GELKLADFGLAR 151 (291)
T ss_pred ------CCeecccCCHHHEEEcCC-CCEEECcccccc
Confidence 248999999999999874 689999998763
No 322
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.25 E-value=0.0014 Score=58.19 Aligned_cols=29 Identities=17% Similarity=0.205 Sum_probs=25.2
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 126 ~ivH~dlkp~Nill~~~-~~~kl~dfg~~~ 154 (336)
T cd07849 126 NVLHRDLKPSNLLLNTN-CDLKICDFGLAR 154 (336)
T ss_pred CeeccCCCHHHEEECCC-CCEEECccccee
Confidence 48999999999999874 679999998764
No 323
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=97.25 E-value=0.0019 Score=57.11 Aligned_cols=29 Identities=28% Similarity=0.183 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++++||+++.+ +.+.+.||+.+.
T Consensus 139 ~i~H~dl~~~nill~~~-~~~kl~dfg~~~ 167 (335)
T PTZ00024 139 YFMHRDLSPANIFINSK-GICKIADFGLAR 167 (335)
T ss_pred CeecccccHHHeEECCC-CCEEECCcccee
Confidence 48999999999999874 678999999774
No 324
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.25 E-value=0.0015 Score=56.49 Aligned_cols=29 Identities=24% Similarity=0.237 Sum_probs=25.5
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.+.||+.+.
T Consensus 150 ~i~H~dlkp~Nili~~~-~~~~l~dfg~~~ 178 (296)
T cd05051 150 NFVHRDLATRNCLVGKN-YTIKIADFGMSR 178 (296)
T ss_pred CccccccchhceeecCC-CceEEcccccee
Confidence 58999999999999874 688999998765
No 325
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=97.24 E-value=0.0024 Score=54.88 Aligned_cols=138 Identities=16% Similarity=0.106 Sum_probs=75.8
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc--ccc-ChHHHHHHHHHHHhCCCCceEEEEECCe----eEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE--VFF-NRDDEIRTFECMSSQGQGPRLLGRFGDG----RVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~--~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~ 111 (267)
.+.+|..|..+.+|++.... .+..+++|....... ... ...+|+++++.+..-++. +++....++ +++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 4 KVEKIGEGTYGVVYKARNKL----TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV-KLLDVIHTENKLYLVF 78 (284)
T ss_pred eeeeecCCCceEEEEEEECC----CCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCc-chhhhcccCCcEEEEe
Confidence 45677888889999997542 357888887653321 111 124688888887543333 333333221 778
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
+|++| .+.. . ++... ... .. ......+..+ +...++.|.
T Consensus 79 e~~~~-~l~~--------------~---~~~~~--~~~-l~-~~~~~~~~~~-----------------i~~~l~~lh-- 117 (284)
T cd07860 79 EFLHQ-DLKK--------------F---MDASP--LSG-IP-LPLIKSYLFQ-----------------LLQGLAFCH-- 117 (284)
T ss_pred ecccc-CHHH--------------H---HHhCC--CCC-CC-HHHHHHHHHH-----------------HHHHHHHHH--
Confidence 88753 2210 0 11111 000 01 1112222221 222223332
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.+.||..+.
T Consensus 118 ------~~~i~H~~l~p~nill~~~-~~~~l~dfg~~~ 148 (284)
T cd07860 118 ------SHRVLHRDLKPQNLLINTE-GAIKLADFGLAR 148 (284)
T ss_pred ------HCCeecCCCCHHHEEECCC-CCEEEeeccchh
Confidence 2248999999999999874 689999998764
No 326
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.23 E-value=0.0015 Score=57.76 Aligned_cols=29 Identities=21% Similarity=0.186 Sum_probs=25.6
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 123 ~ivH~dlkp~NIll~~~-~~~kL~Dfg~~~ 151 (338)
T cd07859 123 NVFHRDLKPKNILANAD-CKLKICDFGLAR 151 (338)
T ss_pred CeecCCCCHHHeEECCC-CcEEEccCcccc
Confidence 49999999999999874 689999999774
No 327
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=97.23 E-value=0.0022 Score=54.55 Aligned_cols=136 Identities=14% Similarity=0.093 Sum_probs=76.1
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc-----cc-ccChHHHHHHHHHHHhCCCCceEEEEE--C-Ce--
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV-----EV-FFNRDDEIRTFECMSSQGQGPRLLGRF--G-DG-- 108 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~-----~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~--~-~~-- 108 (267)
.+.+..|..+.+|++.... .+..+.+|...... .. .....+|+++++.+...++.+ +++.. . .+
T Consensus 7 ~~~lg~g~~g~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~-~~~~~~~~~~~~~ 81 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDAD----TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ-YYGCLRDPEEKKL 81 (264)
T ss_pred eeeEccCCCeEEEEEEEcC----CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcce-EEEEEEcCCCCEE
Confidence 3455677778999997542 35788888753221 11 111246788888886555543 44332 2 12
Q ss_pred -eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHH
Q 024452 109 -RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISM 187 (267)
Q Consensus 109 -~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (267)
+++||++|.++... . .+ .. . -.......+..+ +...+..
T Consensus 82 ~~v~e~~~~~~L~~~-------~-------~~---~~---~---l~~~~~~~~~~~-----------------i~~al~~ 121 (264)
T cd06653 82 SIFVEYMPGGSIKDQ-------L-------KA---YG---A---LTENVTRRYTRQ-----------------ILQGVSY 121 (264)
T ss_pred EEEEEeCCCCcHHHH-------H-------HH---cC---C---CCHHHHHHHHHH-----------------HHHHHHH
Confidence 67899887765310 1 00 00 0 001112222221 2222233
Q ss_pred HHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 188 LEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 188 l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+- ...++|+|++|+||+++++ +.+.|.||..+.
T Consensus 122 LH--------~~~i~H~dl~p~ni~i~~~-~~~~l~dfg~~~ 154 (264)
T cd06653 122 LH--------SNMIVHRDIKGANILRDSA-GNVKLGDFGASK 154 (264)
T ss_pred HH--------hCCEecCCCCHHHEEEcCC-CCEEECcccccc
Confidence 32 2248999999999999874 679999998774
No 328
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.22 E-value=0.0049 Score=52.59 Aligned_cols=138 Identities=17% Similarity=0.162 Sum_probs=74.6
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-c-cChHHHHHHHHHHHhCCCCceEEEEECCe----eEEEee
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-F-FNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEEFI 114 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e~i 114 (267)
..|..|.-..||+...... ......+.+|........ . ....+|..+++.+.. .-.+++++.+..+ +|+||+
T Consensus 11 ~~ig~G~fg~V~~~~~~~~-~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~ 88 (266)
T cd05064 11 RILGTGRFGELCRGCLKLP-SKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDH-SNIVRLEGVITRGNTMMIVTEYM 88 (266)
T ss_pred eeecccCCCeEEEEEEecC-CCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCC-CCcCeEEEEEecCCCcEEEEEeC
Confidence 4457777789999864321 112456777776543211 1 111356666666533 2235566654322 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|..+.. .. .+ +. .. .. ...+..|..+ +...++.+-
T Consensus 89 ~~~~L~~-------~l-------~~-~~-----~~-l~-~~~~~~~~~~-----------------i~~al~~lH----- 124 (266)
T cd05064 89 SNGALDS-------FL-------RK-HE-----GQ-LV-AGQLMGMLPG-----------------LASGMKYLS----- 124 (266)
T ss_pred CCCcHHH-------HH-------Hh-CC-----CC-CC-HHHHHHHHHH-----------------HHHHHHHHH-----
Confidence 9876542 11 00 00 00 01 1122222221 222333332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
...++|+|++|.||+++++ +.+.+.||..+
T Consensus 125 ---~~~iiH~dikp~nili~~~-~~~~l~dfg~~ 154 (266)
T cd05064 125 ---EMGYVHKGLAAHKVLVNSD-LVCKISGFRRL 154 (266)
T ss_pred ---HCCEeeccccHhhEEEcCC-CcEEECCCccc
Confidence 2248999999999999874 67889999754
No 329
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=97.20 E-value=0.0014 Score=56.76 Aligned_cols=29 Identities=17% Similarity=0.162 Sum_probs=25.0
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|+||+.+.
T Consensus 126 ~i~H~dl~p~nili~~~-~~~~l~d~g~~~ 154 (293)
T cd07843 126 WILHRDLKTSNLLLNNR-GILKICDFGLAR 154 (293)
T ss_pred CeeeccCCHHHEEECCC-CcEEEeecCcee
Confidence 48999999999999974 689999997654
No 330
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=97.20 E-value=0.002 Score=52.84 Aligned_cols=137 Identities=17% Similarity=0.140 Sum_probs=77.4
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEEC--C--eeEEEee
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFG--D--GRVEEFI 114 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~e~i 114 (267)
..+..|....+|++.... .+..+++|........ ..+..+|.+.++.+...++.+ ++.... + .++++|+
T Consensus 5 ~~i~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~-~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 5 KKLGEGAFGKVYLARDKG----TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVK-LYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred eEeecCCCeEEEEEEEcC----CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhh-heeeeecCCceEEEEecc
Confidence 556677788999998643 2578999988654321 112246777777775444433 333322 2 2788998
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. .+..... . .+ ......+.. .+...+..+..
T Consensus 80 ~~~~L~~--------------~~~~~~~---~----~~-~~~~~~~~~-----------------~l~~~l~~lh~---- 116 (225)
T smart00221 80 EGGDLFD--------------YLRKKGG---K----LS-EEEARFYLR-----------------QILEALEYLHS---- 116 (225)
T ss_pred CCCCHHH--------------HHHhccc---C----CC-HHHHHHHHH-----------------HHHHHHHHHHh----
Confidence 8764431 0111000 0 00 011111111 11112222221
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|+++.||+++++ +.+.++||+.+..
T Consensus 117 ----~~i~h~di~~~ni~v~~~-~~~~l~d~g~~~~ 147 (225)
T smart00221 117 ----LGIVHRDLKPENILLGMD-GLVKLADFGLARF 147 (225)
T ss_pred ----CCeecCCCCHHHEEEcCC-CCEEEeeCceeeE
Confidence 279999999999999974 7899999997764
No 331
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.19 E-value=0.0018 Score=52.23 Aligned_cols=74 Identities=22% Similarity=0.255 Sum_probs=59.6
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECCeeEEEeecCCCCC
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLS 120 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~~v~e~i~G~~l~ 120 (267)
..+..|.+..+|.+.+. +..+++|+-..++. .-+-+.|+++++.++..|.+|++|..+.+...|+|++|+++.
T Consensus 28 ~~L~KG~~s~Vyl~~~~------~~~~a~Kvrr~ds~-r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L~ 100 (201)
T COG2112 28 KELAKGTTSVVYLGEWR------GGEVALKVRRRDSP-RRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPLG 100 (201)
T ss_pred hhhhcccccEEEEeecc------CceEEEEEecCCcc-hhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcchh
Confidence 34578889999999864 36788888765542 223368999999999999999999999887779999999887
Q ss_pred c
Q 024452 121 A 121 (267)
Q Consensus 121 ~ 121 (267)
.
T Consensus 101 ~ 101 (201)
T COG2112 101 K 101 (201)
T ss_pred h
Confidence 5
No 332
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.19 E-value=0.0012 Score=56.83 Aligned_cols=136 Identities=15% Similarity=0.111 Sum_probs=75.8
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cc-cChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEee
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VF-FNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFI 114 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i 114 (267)
..|..|..+.+|++.... .+..+.+|+...... .. ..-.+|+++++.+...++. +.++... +. +++||+
T Consensus 11 ~~ig~g~~g~v~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~ 85 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIP----TGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIV-SFYGAFLNENNICMCMEFM 85 (284)
T ss_pred HHcCCCCCeEEEEEEEcC----CCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcc-eEeeeEecCCEEEEEEecC
Confidence 456777789999987542 356788887643321 11 1113677888777544443 3444332 22 889999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|..+.. .. .+ .. +. .......+.. .+...+..+-+
T Consensus 86 ~~~~L~~-------~~-------~~---~~-~~-----~~~~~~~~~~-----------------~i~~~l~~LH~---- 121 (284)
T cd06620 86 DCGSLDR-------IY-------KK---GG-PI-----PVEILGKIAV-----------------AVVEGLTYLYN---- 121 (284)
T ss_pred CCCCHHH-------HH-------Hh---cc-CC-----CHHHHHHHHH-----------------HHHHHHHHHHH----
Confidence 9875532 11 00 00 00 0111111111 11222233321
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.|+||..+.
T Consensus 122 ---~~~i~H~dl~p~nil~~~~-~~~~l~d~gl~~ 152 (284)
T cd06620 122 ---VHRIMHRDIKPSNILVNSR-GQIKLCDFGVSG 152 (284)
T ss_pred ---hcCeeccCCCHHHEEECCC-CcEEEccCCccc
Confidence 1248999999999999874 689999998664
No 333
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=97.19 E-value=0.0087 Score=52.36 Aligned_cols=72 Identities=11% Similarity=0.057 Sum_probs=42.6
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEE--C-Ce---eEEEee
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRF--G-DG---RVEEFI 114 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~--~-~~---~v~e~i 114 (267)
..|..|....||++..... ..+..+.+|...... ......+|+.+++.+..-++.. ++..+ . +. ++++|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~--~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDG--KDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVIS-LQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred cccccCCCeEEEEEEEccC--CCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcc-eeeeEecCCCcEEEEEEecc
Confidence 3577788889999975321 134678888764322 1112247899998886655443 23322 1 21 677887
Q ss_pred cC
Q 024452 115 HA 116 (267)
Q Consensus 115 ~G 116 (267)
+|
T Consensus 83 ~~ 84 (317)
T cd07868 83 EH 84 (317)
T ss_pred CC
Confidence 65
No 334
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=97.18 E-value=0.003 Score=56.80 Aligned_cols=137 Identities=18% Similarity=0.193 Sum_probs=78.3
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----c----cccChHHHHHHHHHHHhCCCCceEE---EEEC
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----E----VFFNRDDEIRTFECMSSQGQGPRLL---GRFG 106 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~----~~~dr~~E~~~~~~l~~~gl~P~v~---~~~~ 106 (267)
+....+..|....|=...-.. .++.|.+||.++.. + ...+..+|+++|+.|+. |.++ ..+.
T Consensus 175 ii~~~LGsGafg~Vkla~e~~----tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H----P~IV~~~d~f~ 246 (475)
T KOG0615|consen 175 IISKTLGSGAFGLVKLAYEKK----TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH----PNIVRIKDFFE 246 (475)
T ss_pred EeeeeecCCceeEEEEEEEcc----cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC----CCEEEEeeeee
Confidence 344555666666665554222 46899999886531 1 12333689999999876 4433 3332
Q ss_pred --C--eeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHH
Q 024452 107 --D--GRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLK 182 (267)
Q Consensus 107 --~--~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 182 (267)
+ .+|+||++|..+-.--..+ . .+.+..-+. -+..|.
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv~n---------------k---------~l~ed~~K~----------------~f~Qll 286 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVVAN---------------K---------YLREDLGKL----------------LFKQLL 286 (475)
T ss_pred cCCceEEEEEEecCccHHHHHHhc---------------c---------ccccchhHH----------------HHHHHH
Confidence 2 3999999986553211000 0 000000000 012333
Q ss_pred HHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCC--CEEEEeecccCc
Q 024452 183 DEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETS--SITIIVSFTFLQ 230 (267)
Q Consensus 183 ~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~--~v~lIDwE~a~~ 230 (267)
..+.+| +..++||+|++|.|||+..+.. .+.|-||..|..
T Consensus 287 ~avkYL--------H~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 287 TAVKYL--------HSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred HHHHHH--------HHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 344444 3456999999999999986422 367999998864
No 335
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=97.18 E-value=0.002 Score=54.11 Aligned_cols=140 Identities=15% Similarity=0.058 Sum_probs=73.8
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--cccc-ChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVFF-NRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e 112 (267)
...+..|....+|++.... ++..+++|...... .... ....|..+++.+...++. +++.... +. ++++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLS----DNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNII-SYKEAFLDGNKLCIVME 79 (256)
T ss_pred eeeecCCCceeEEEEEECC----CCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCch-hhhhhhccCCEEEEEeh
Confidence 4556777778999987542 35788898865321 1111 112566666666533333 2333222 22 7889
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. .... .. .+.. .. ....+..+.. .+...+..+.
T Consensus 80 ~~~~~~L~~-------~~~~---~~-------~~~~-~~-~~~~~~~~~~-----------------~l~~al~~lh--- 120 (256)
T cd08530 80 YAPFGDLSK-------AISK---RK-------KKRK-LI-PEQEIWRIFI-----------------QLLRGLQALH--- 120 (256)
T ss_pred hcCCCCHHH-------HHHH---HH-------hhcC-CC-CHHHHHHHHH-----------------HHHHHHHHHh---
Confidence 888865532 1111 00 0000 00 0111111111 1222222332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|+++.||++++ ++.+.++||..+.
T Consensus 121 -----~~~i~h~~l~~~ni~~~~-~~~~kl~d~g~~~ 151 (256)
T cd08530 121 -----EQKILHRDLKSANILLVA-NDLVKIGDLGISK 151 (256)
T ss_pred -----hCCcccCCCCcceEEEec-CCcEEEeeccchh
Confidence 234899999999999997 4679999997664
No 336
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=97.18 E-value=0.0041 Score=53.32 Aligned_cols=139 Identities=18% Similarity=0.125 Sum_probs=76.7
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccC-hHHHHHHHHHHHhCCCCceEEEEECC--e--eEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFN-RDDEIRTFECMSSQGQGPRLLGRFGD--G--RVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e 112 (267)
.+..+..|..+.+|++.... ++..+++|........ ... ..+|+.+++.+...+ .++++..+.+ . ++++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRT----TGEIVALKEIHLDAEEGTPSTAIREISLMKELKHEN-IVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred EeeeeccCCceEEEEEEECC----CCeEEEEEEecccccccchHHHHHHHHHHHhhcCCC-EeeeeeeEeeCCcEEEEEe
Confidence 45667788888999998543 3578888876433211 111 136888888885433 3445554432 2 7889
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++| .+.. . +.. +.... .-.......+..+ +...+..|.
T Consensus 79 ~~~~-~l~~-------~-------~~~-~~~~~-----~~~~~~~~~~~~q-----------------i~~~l~~lH--- 117 (284)
T cd07836 79 YMDK-DLKK-------Y-------MDT-HGVRG-----ALDPNTVKSFTYQ-----------------LLKGIAFCH--- 117 (284)
T ss_pred cCCc-cHHH-------H-------HHh-cCCCC-----CcCHHHHHHHHHH-----------------HHHHHHHHH---
Confidence 8875 2110 0 000 11000 0001112222211 122223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.+.||..+.
T Consensus 118 -----~~~i~h~dl~p~ni~~~~~-~~~~l~d~g~~~ 148 (284)
T cd07836 118 -----ENRVLHRDLKPQNLLINKR-GELKLADFGLAR 148 (284)
T ss_pred -----HCCeeeCCCCHHHEEECCC-CcEEEeecchhh
Confidence 1248999999999999874 689999998764
No 337
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.17 E-value=0.0054 Score=52.62 Aligned_cols=142 Identities=16% Similarity=0.157 Sum_probs=77.5
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEEC-C--eeEEEe
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFG-D--GRVEEF 113 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~--~~v~e~ 113 (267)
....|..|..+.+|++............+.+|........ ...-.+|+..++.+...++.+ +++... . .++++|
T Consensus 11 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~v~e~ 89 (279)
T cd05057 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVR-LLGICLSSQVQLITQL 89 (279)
T ss_pred EcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcce-EEEEEecCceEEEEec
Confidence 3456777878999998754311111235778876544221 111236777777775444433 343332 2 278898
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|.++... ++....+ .. ...+..|..+ +...+..|.+
T Consensus 90 ~~~g~L~~~-----------------l~~~~~~----~~-~~~~~~~~~q-----------------i~~~l~~LH~--- 127 (279)
T cd05057 90 MPLGCLLDY-----------------VRNHKDN----IG-SQYLLNWCVQ-----------------IAKGMSYLEE--- 127 (279)
T ss_pred CCCCcHHHH-----------------HHhccCC----CC-HHHHHHHHHH-----------------HHHHHHHHHh---
Confidence 887655321 1111000 00 1112222221 2222333322
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 128 -----~~i~H~di~p~nil~~~~-~~~kL~dfg~~~ 157 (279)
T cd05057 128 -----KRLVHRDLAARNVLVKTP-QHVKITDFGLAK 157 (279)
T ss_pred -----CCEEecccCcceEEEcCC-CeEEECCCcccc
Confidence 458999999999999864 679999999775
No 338
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.17 E-value=0.015 Score=50.18 Aligned_cols=150 Identities=17% Similarity=0.161 Sum_probs=77.4
Q ss_pred EEEEecCceeeeeEEEEeCCC-CCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECCe----eEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAK-NNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~-~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~ 111 (267)
-...|..|..+.+|++...+. .+..+..+.+|........ ...-.+|..+++.+... -.+++++...++ +++
T Consensus 10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~ 88 (288)
T cd05061 10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVM 88 (288)
T ss_pred eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCC-CeeeEEEEEcCCCCcEEEE
Confidence 356678888899999864321 1112457888876433211 11112455666655432 234555554322 889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCC-chhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRK-ALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
||++|.++.. ... +........... ......+..+.. .+...+..+-
T Consensus 89 e~~~~g~L~~-------~l~-------~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~l~~~l~~lH- 136 (288)
T cd05061 89 ELMAHGDLKS-------YLR-------SLRPEAENNPGRPPPTLQEMIQMAA-----------------EIADGMAYLN- 136 (288)
T ss_pred eCCCCCCHHH-------HHH-------HhccccccCCCCCCCCHHHHHHHHH-----------------HHHHHHHHHH-
Confidence 9998876642 111 111100000000 011111221211 1222223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.++||..+.
T Consensus 137 -------~~~i~H~dikp~nili~~~-~~~~L~Dfg~~~ 167 (288)
T cd05061 137 -------AKKFVHRDLAARNCMVAHD-FTVKIGDFGMTR 167 (288)
T ss_pred -------hCCCcCCCCChheEEEcCC-CcEEECcCCccc
Confidence 2358999999999999974 689999998764
No 339
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.16 E-value=0.0018 Score=60.18 Aligned_cols=137 Identities=13% Similarity=0.113 Sum_probs=77.2
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCC---CcccccChHHHHHHHHHHHhCCCC--ceEEEE-ECCeeEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGE---GVEVFFNRDDEIRTFECMSSQGQG--PRLLGR-FGDGRVEE 112 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~---~~~~~~dr~~E~~~~~~l~~~gl~--P~v~~~-~~~~~v~e 112 (267)
.+..|..|.+..||...-.. .+..+.+|...- ..+.++ -+|+.+|+-+....++ =+-|.. ++-|.|||
T Consensus 277 ~~~kigqgaSG~vy~A~~~~----~~~~VaiK~m~l~~Q~~keLi--lnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 277 DFKKIGQGATGGVYVARKIS----TKQEVAIKRMDLRKQPKKELL--LNEILVMRDLHHPNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred chhhhccccccceeeeeecc----CCceEEEEEEEeccCCchhhh--HHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence 57778899999999886432 234444443321 122222 2688887665543321 011111 23469999
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|..++.- ... . ..+ ..+++ ..|. ...+.+..|
T Consensus 351 ym~ggsLTDv-------Vt~---------------~-~~~-E~qIA-------~Icr----------e~l~aL~fL---- 385 (550)
T KOG0578|consen 351 YMEGGSLTDV-------VTK---------------T-RMT-EGQIA-------AICR----------EILQGLKFL---- 385 (550)
T ss_pred ecCCCchhhh-------hhc---------------c-ccc-HHHHH-------HHHH----------HHHHHHHHH----
Confidence 9999887631 100 0 000 01111 1110 111222333
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcc
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQN 231 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~ 231 (267)
+...++|.|++.+|||...+ +.+.|.||.||+.-
T Consensus 386 ----H~~gIiHrDIKSDnILL~~~-g~vKltDFGFcaqi 419 (550)
T KOG0578|consen 386 ----HARGIIHRDIKSDNILLTMD-GSVKLTDFGFCAQI 419 (550)
T ss_pred ----HhcceeeeccccceeEeccC-CcEEEeeeeeeecc
Confidence 33569999999999999874 78999999999753
No 340
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.16 E-value=0.0038 Score=56.80 Aligned_cols=133 Identities=15% Similarity=0.128 Sum_probs=74.2
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEee
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFI 114 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i 114 (267)
-+..|..|....||++..... ..+..+++|...... ...+|+.+++.+...++.+ ++..+. +. +++++.
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~--~~~~~v~vK~~~~~~----~~~~E~~il~~l~h~~iv~-~~~~~~~~~~~~lv~e~~ 168 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGD--EQRKKVIVKAVTGGK----TPGREIDILKTISHRAIIN-LIHAYRWKSTVCMVMPKY 168 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCC--ccceeEEEEeccccc----cHHHHHHHHHhcCCCCccc-eeeeEeeCCEEEEEehhc
Confidence 456678888899999864321 134678888764332 1247999998886544443 443332 21 566665
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
.|.. . ..+.+- .. .. ......+.. .+...+..|-
T Consensus 169 ~~~l-----------~----~~l~~~-------~~-l~-~~~~~~i~~-----------------ql~~aL~~LH----- 202 (392)
T PHA03207 169 KCDL-----------F----TYVDRS-------GP-LP-LEQAITIQR-----------------RLLEALAYLH----- 202 (392)
T ss_pred CCCH-----------H----HHHHhc-------CC-CC-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 4310 1 111100 00 01 111222221 1222233332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
...++|+|++|.|||++.+ +.+.|+||..|
T Consensus 203 ---~~givHrDlkp~Nill~~~-~~~~l~DfG~a 232 (392)
T PHA03207 203 ---GRGIIHRDVKTENIFLDEP-ENAVLGDFGAA 232 (392)
T ss_pred ---HCCccccCCCHHHEEEcCC-CCEEEccCccc
Confidence 2358999999999999874 68999999876
No 341
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=97.15 E-value=0.0024 Score=54.59 Aligned_cols=29 Identities=17% Similarity=0.156 Sum_probs=24.8
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++.+ +.+.++||..+.
T Consensus 119 ~i~H~dikp~nil~~~~-~~~~l~Dfg~~~ 147 (268)
T cd05086 119 NFLHSDLALRNCFLTSD-LTVKVGDYGIGP 147 (268)
T ss_pred CeeccCCccceEEEcCC-ccEEeccccccc
Confidence 38999999999999874 679999998753
No 342
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=97.15 E-value=0.0047 Score=54.26 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=27.9
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+...++|+|++|.|||+++ .+.+.|+||.-|.
T Consensus 137 H~~~IlHRDLKPQNlLi~~-~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 137 HSHGILHRDLKPQNLLISS-SGVLKLADFGLAR 168 (323)
T ss_pred HhCCeecccCCcceEEECC-CCcEeeeccchHH
Confidence 3456999999999999998 5789999999886
No 343
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.15 E-value=0.0025 Score=54.66 Aligned_cols=137 Identities=17% Similarity=0.101 Sum_probs=74.4
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccc-cChHHHHHHHHHHHhCCCCceEEEEECC--e--eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVF-FNRDDEIRTFECMSSQGQGPRLLGRFGD--G--RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~--~--~v~e 112 (267)
...+..|....+|++.... ++..+++|+..... ... ....+|..+++.+....+ ++++....+ . ++++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-v~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKL----TGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI-VRLLDVVHSENKLYLVFE 78 (283)
T ss_pred heEecCCCCeEEEEEEEcC----CCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCc-cCHhheeccCCeEEEEEe
Confidence 3456778788999997543 35788898775332 111 111367887777764333 334444332 2 7788
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|+++ ++.. .+ +.... . ... ......+.. .+.+.++.|.+
T Consensus 79 ~~~~-~l~~--------------~~---~~~~~--~-~~~-~~~~~~~~~-----------------~i~~~L~~lH~-- 117 (283)
T cd07835 79 FLDL-DLKK--------------YM---DSSPL--T-GLD-PPLIKSYLY-----------------QLLQGIAYCHS-- 117 (283)
T ss_pred ccCc-CHHH--------------HH---hhCCC--C-CCC-HHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 8753 2211 00 01000 0 000 111111211 12222233321
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+||++++ ++.+.|+||..+.
T Consensus 118 ------~~~~H~dl~p~nil~~~-~~~~~l~df~~~~ 147 (283)
T cd07835 118 ------HRVLHRDLKPQNLLIDR-EGALKLADFGLAR 147 (283)
T ss_pred ------CCeeCCCCCHHHEEEcC-CCcEEEeeccccc
Confidence 35899999999999987 4789999998764
No 344
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.14 E-value=0.0032 Score=55.75 Aligned_cols=80 Identities=15% Similarity=0.152 Sum_probs=46.7
Q ss_pred EEEecCceeeeeEEEEeCCCCC---CCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC-e---eE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNN---GLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RV 110 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~---~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v 110 (267)
...|..|....+|.+....... .....+.+|+....... .-...+|.++++.+.++.-..++++.+.. + ++
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 96 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVL 96 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEE
Confidence 5567777788999996421100 01236788876543211 11124688888888655444455555432 2 78
Q ss_pred EEeecCCCC
Q 024452 111 EEFIHARTL 119 (267)
Q Consensus 111 ~e~i~G~~l 119 (267)
++|++|.++
T Consensus 97 ~e~~~~g~L 105 (334)
T cd05100 97 VEYASKGNL 105 (334)
T ss_pred EecCCCCcH
Confidence 999887654
No 345
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.14 E-value=0.0023 Score=57.01 Aligned_cols=81 Identities=21% Similarity=0.216 Sum_probs=45.7
Q ss_pred EEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCcc-c-ccChHHHHHHHHHHHhCCCCceEEEEE--CCe---eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVE-V-FFNRDDEIRTFECMSSQGQGPRLLGRF--GDG---RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~---~v~ 111 (267)
...|..|-.+.||++...... ...+..+.+|+...... . ......|+.++..+..+.-..++++.+ .+. .++
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ 91 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEE
Confidence 355677778899998532111 11246788988753221 1 111135778887775443223344433 222 679
Q ss_pred EeecCCCCC
Q 024452 112 EFIHARTLS 120 (267)
Q Consensus 112 e~i~G~~l~ 120 (267)
+|++|.++.
T Consensus 92 ey~~~~~L~ 100 (337)
T cd05054 92 EYCKFGNLS 100 (337)
T ss_pred ecCCCCCHH
Confidence 999987664
No 346
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.12 E-value=0.0032 Score=53.09 Aligned_cols=138 Identities=9% Similarity=0.079 Sum_probs=77.3
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCC---cccccChHHHHHHHHHHHhCCCCceEEEEECCe----eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEG---VEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~---~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e 112 (267)
+..+..|..+.+|.+.... ++..+++|..... .....+..+|+.+++.+..-++ ++++..+.+. ++++
T Consensus 5 ~~~lg~g~~g~~~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKE----DGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI-VQYQESFEENGNLYIVMD 79 (256)
T ss_pred EEEeccCCceEEEEEEEcC----CCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCe-eeeEeeecCCCeEEEEEe
Confidence 5567777788999987543 3578888876421 1111122467777777754443 3455544322 7899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. ... .... .. ........|..+ +...+..+-
T Consensus 80 ~~~~~~l~~-------~~~----------~~~~--~~--~~~~~~~~~~~~-----------------l~~~l~~lh--- 118 (256)
T cd08218 80 YCEGGDLYK-------KIN----------AQRG--VL--FPEDQILDWFVQ-----------------ICLALKHVH--- 118 (256)
T ss_pred cCCCCcHHH-------HHH----------hccC--CC--CCHHHHHHHHHH-----------------HHHHHHHHH---
Confidence 998865421 010 0000 00 011122223221 122222332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++++ +.+.++||+.+.
T Consensus 119 -----~~~i~h~~l~~~nil~~~~-~~~~l~d~~~~~ 149 (256)
T cd08218 119 -----DRKILHRDIKSQNIFLTKD-GTIKLGDFGIAR 149 (256)
T ss_pred -----hCCEecCCCCHHHEEEcCC-CCEEEeecccee
Confidence 2358999999999999874 679999998775
No 347
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=97.12 E-value=0.0019 Score=56.51 Aligned_cols=29 Identities=21% Similarity=0.261 Sum_probs=25.2
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++.+ +.+.+.||+.+.
T Consensus 135 ~i~H~dl~p~nil~~~~-~~~kl~dfg~~~ 163 (308)
T cd06634 135 NMIHRDVKAGNILLSEP-GLVKLGDFGSAS 163 (308)
T ss_pred CcccCCCCHHhEEECCC-CcEEECCcccce
Confidence 48999999999999874 679999998765
No 348
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=97.11 E-value=0.0012 Score=54.56 Aligned_cols=128 Identities=18% Similarity=0.159 Sum_probs=71.5
Q ss_pred eeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEEC--C--eeEEEeecCCCCCcc
Q 024452 49 NEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFG--D--GRVEEFIHARTLSAA 122 (267)
Q Consensus 49 N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~e~i~G~~l~~~ 122 (267)
..+|++.... ++..+++|+....... ..+...|.+.++.+...++.+ +++... . .++++|++|.++..
T Consensus 3 g~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~-~~~~~~~~~~~~l~~e~~~~~~L~~- 76 (244)
T smart00220 3 GKVYLARDKK----TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVR-LYDVFEDEDKLYLVMEYCDGGDLFD- 76 (244)
T ss_pred eEEEEEEECC----CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHH-HHhheeeCCEEEEEEeCCCCCCHHH-
Confidence 4788887542 3578999998654321 112246777777774444433 333221 2 27899988865532
Q ss_pred cCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEE
Q 024452 123 DIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFC 202 (267)
Q Consensus 123 ~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~ 202 (267)
. +...+. .+ ...+..+.. .+...+..+.+ ..++
T Consensus 77 ------~-------~~~~~~--------~~-~~~~~~~~~-----------------~l~~~l~~lh~--------~~i~ 109 (244)
T smart00220 77 ------L-------LKKRGR--------LS-EDEARFYAR-----------------QILSALEYLHS--------NGII 109 (244)
T ss_pred ------H-------HHhccC--------CC-HHHHHHHHH-----------------HHHHHHHHHHH--------cCee
Confidence 0 111000 01 111222221 11222233322 2689
Q ss_pred ccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 203 HNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 203 H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
|+|+.++||+++++ +.+.++||+.+..
T Consensus 110 h~~i~~~ni~~~~~-~~~~l~d~~~~~~ 136 (244)
T smart00220 110 HRDLKPENILLDED-GHVKLADFGLARQ 136 (244)
T ss_pred cCCcCHHHeEECCC-CcEEEccccceee
Confidence 99999999999974 6899999998764
No 349
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=97.10 E-value=0.0044 Score=53.11 Aligned_cols=29 Identities=21% Similarity=0.224 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++++||+++++ +.+.|+||..+.
T Consensus 127 ~i~h~~l~~~nili~~~-~~~~l~dfg~~~ 155 (287)
T cd07838 127 RIVHRDLKPQNILVTSD-GQVKIADFGLAR 155 (287)
T ss_pred CeeeccCChhhEEEccC-CCEEEeccCcce
Confidence 48999999999999975 789999998763
No 350
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=97.09 E-value=0.019 Score=50.16 Aligned_cols=72 Identities=10% Similarity=0.016 Sum_probs=42.2
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEE--C-Ce---eEEEee
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRF--G-DG---RVEEFI 114 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~--~-~~---~v~e~i 114 (267)
..|..|..+.||++..... ..+..+.+|....... .....+|+++++.+...++.+ ++..+ . +. ++++|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~--~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDG--KDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIA-LQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred eEeccCCCeeEEEEEecCC--CccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeee-EEEEEeccCCCeEEEEEeee
Confidence 4577788899999985321 1346788887543221 112247888888876544433 22322 1 22 778887
Q ss_pred cC
Q 024452 115 HA 116 (267)
Q Consensus 115 ~G 116 (267)
+|
T Consensus 83 ~~ 84 (317)
T cd07867 83 EH 84 (317)
T ss_pred CC
Confidence 75
No 351
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=97.09 E-value=0.0028 Score=55.38 Aligned_cols=29 Identities=14% Similarity=0.313 Sum_probs=24.9
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|+||+++.+ +.+.+.||+.+.
T Consensus 121 ~ivH~dlk~~Nili~~~-~~~kl~d~~~~~ 149 (314)
T cd08216 121 GFIHRSVKASHILLSGD-GKVVLSGLRYSV 149 (314)
T ss_pred CeecCCCCcceEEEecC-CceEEecCccce
Confidence 48999999999999974 678999998663
No 352
>PHA02988 hypothetical protein; Provisional
Probab=97.08 E-value=0.0035 Score=54.25 Aligned_cols=73 Identities=18% Similarity=0.334 Sum_probs=46.1
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---cccC-hHHHHHHHHHHHhCCCCceEEEEECC--------e
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---VFFN-RDDEIRTFECMSSQGQGPRLLGRFGD--------G 108 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~~~d-r~~E~~~~~~l~~~gl~P~v~~~~~~--------~ 108 (267)
..+..|-...+|+.... +..+++|....... ..+. -.+|+.+++.+...++. ++++.+.+ .
T Consensus 26 ~~i~~g~~~~v~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN------NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNIL-KIYGFIIDIVDDLPRLS 98 (283)
T ss_pred eEEeeCCceEEEEEEEC------CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEE-EEeeeEEecccCCCceE
Confidence 44567778899999863 47899998754321 1121 24788888888665443 34443211 1
Q ss_pred eEEEeecCCCCC
Q 024452 109 RVEEFIHARTLS 120 (267)
Q Consensus 109 ~v~e~i~G~~l~ 120 (267)
+++||++|..+.
T Consensus 99 lv~Ey~~~g~L~ 110 (283)
T PHA02988 99 LILEYCTRGYLR 110 (283)
T ss_pred EEEEeCCCCcHH
Confidence 789999987654
No 353
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=97.07 E-value=0.0025 Score=55.34 Aligned_cols=137 Identities=14% Similarity=0.102 Sum_probs=73.7
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccC-hHHHHHHHHHHHhCCCCceEEEEE--CC--eeEEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFN-RDDEIRTFECMSSQGQGPRLLGRF--GD--GRVEE 112 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~d-r~~E~~~~~~l~~~gl~P~v~~~~--~~--~~v~e 112 (267)
..+..+..|..+.+|++.... .+..+++|..........+ ...|..+++.+..-++ +++++.+ .+ .+|++
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i-~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 22 TRFEKIGQGASGTVYTAIDVA----TGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNI-VNYLDSYLVGDELWVVME 96 (293)
T ss_pred eeeeEecCCCCeEEEEEEEcC----CCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCe-eehhheeeeCCcEEEEEe
Confidence 345667777788999996432 2467888876432211111 1356666665543332 2233322 22 28899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++... .. + .. .. ...+..+.. .+...+..+.
T Consensus 97 ~~~~~~L~~~-------~~-------~---~~------l~-~~~~~~i~~-----------------~l~~al~~LH--- 132 (293)
T cd06647 97 YLAGGSLTDV-------VT-------E---TC------MD-EGQIAAVCR-----------------ECLQALEFLH--- 132 (293)
T ss_pred cCCCCcHHHH-------Hh-------h---cC------CC-HHHHHHHHH-----------------HHHHHHHHHH---
Confidence 9988665320 10 0 00 00 011111111 1222223332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++.+ +.+.|+||..+.
T Consensus 133 -----~~gi~H~dL~p~Nili~~~-~~~kL~dfg~~~ 163 (293)
T cd06647 133 -----SNQVIHRDIKSDNILLGMD-GSVKLTDFGFCA 163 (293)
T ss_pred -----hCCEeeccCCHHHEEEcCC-CCEEEccCccee
Confidence 2248999999999999874 679999998653
No 354
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=97.07 E-value=0.0038 Score=54.45 Aligned_cols=30 Identities=17% Similarity=0.155 Sum_probs=25.7
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 128 ~~ivH~dikp~Nill~~~-~~~kL~Dfg~~~ 157 (303)
T cd05110 128 RRLVHRDLAARNVLVKSP-NHVKITDFGLAR 157 (303)
T ss_pred cCeeccccccceeeecCC-CceEEccccccc
Confidence 358999999999999864 679999998775
No 355
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=97.06 E-value=0.0017 Score=55.71 Aligned_cols=136 Identities=13% Similarity=0.080 Sum_probs=73.4
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccc-cChHHHHHHHHHHHhCCCCceEEEEEC--C--eeEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVF-FNRDDEIRTFECMSSQGQGPRLLGRFG--D--GRVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~e 112 (267)
+..+..|..+.+|++.... .+..+++|...... ... ....+|+++++.+...++. +++.... + .++++
T Consensus 5 ~~~l~~g~~~~vy~~~~~~----~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRE----THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV-RLYDVLHSDKKLTLVFE 79 (284)
T ss_pred EEEecccCCeEEEEEEECC----CCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCee-eHHHHhccCCceEEEEe
Confidence 4567777788999998643 35678888764321 111 1224688888877543332 2222222 1 17788
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|.+|. +. +. ++....+ . .......+.. .+.+.+..|..
T Consensus 80 ~~~~~-l~-------~~----------~~~~~~~----~-~~~~~~~~~~-----------------qi~~al~~LH~-- 117 (284)
T cd07839 80 YCDQD-LK-------KY----------FDSCNGD----I-DPEIVKSFMF-----------------QLLKGLAFCHS-- 117 (284)
T ss_pred cCCCC-HH-------HH----------HHhcCCC----C-CHHHHHHHHH-----------------HHHHHHHHHHH--
Confidence 87641 11 00 1111000 0 0111222221 12223333322
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+||+++.+ +.+.|+||+.+.
T Consensus 118 ------~~i~H~dl~~~nil~~~~-~~~~l~dfg~~~ 147 (284)
T cd07839 118 ------HNVLHRDLKPQNLLINKN-GELKLADFGLAR 147 (284)
T ss_pred ------CCEecCCCCHHHEEEcCC-CcEEECccchhh
Confidence 248999999999999874 689999998664
No 356
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.04 E-value=0.0014 Score=55.69 Aligned_cols=77 Identities=17% Similarity=0.068 Sum_probs=42.3
Q ss_pred ecCceeeeeEEEEeCCCC--CCCCceEEEEEcCCCc--ccccChHHHHHHHHHHHhCCCCceEEEEEC--C--eeEEEee
Q 024452 43 LKGAMTNEVYQIAWPAKN--NGLARNVLVRIYGEGV--EVFFNRDDEIRTFECMSSQGQGPRLLGRFG--D--GRVEEFI 114 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~--~~~~~~~vlRi~~~~~--~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~--~~v~e~i 114 (267)
+..|-...+|+++..... +.++..+.+|....+. .....-.+|+.+++.+..-++.+ +++.+. + .++++|+
T Consensus 3 lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVK-LLGVCLLNEPQYIIMELM 81 (269)
T ss_pred cccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeee-EeeeecCCCCeEEEEecc
Confidence 556667889998754211 1123567788765432 11111235777777665444433 444432 2 2889999
Q ss_pred cCCCCC
Q 024452 115 HARTLS 120 (267)
Q Consensus 115 ~G~~l~ 120 (267)
+|.++.
T Consensus 82 ~~~~L~ 87 (269)
T cd05044 82 EGGDLL 87 (269)
T ss_pred CCCcHH
Confidence 986553
No 357
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=97.04 E-value=0.0055 Score=54.27 Aligned_cols=135 Identities=14% Similarity=0.132 Sum_probs=73.5
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccChHHHHHHHHHHHhCCCCceEEEEE-C-C-e--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFNRDDEIRTFECMSSQGQGPRLLGRF-G-D-G--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~~~~l~~~gl~P~v~~~~-~-~-~--~v 110 (267)
.+..|..|..+.+|++.... .+..+.+|...... ........|.++++.+..-++.+ ++..+ . . . ++
T Consensus 14 ~~~~ig~g~~g~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~-~~~~~~~~~~~~~lv 88 (328)
T cd07856 14 DLQPVGMGAFGLVCSARDQL----TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIIS-LSDIFISPLEDIYFV 88 (328)
T ss_pred EEEeecccCCeEEEEEEECC----CCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeee-EeeeEecCCCcEEEE
Confidence 46677888889999997442 35788888654321 11111236888888776545444 33332 2 2 1 67
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|..| .+. ..+. .... +. .....+.. .+.+.+..+-
T Consensus 89 ~e~~~~-~L~--------------~~~~---~~~~-----~~--~~~~~~~~-----------------ql~~aL~~LH- 125 (328)
T cd07856 89 TELLGT-DLH--------------RLLT---SRPL-----EK--QFIQYFLY-----------------QILRGLKYVH- 125 (328)
T ss_pred eehhcc-CHH--------------HHHh---cCCC-----CH--HHHHHHHH-----------------HHHHHHHHHH-
Confidence 777632 111 1111 1000 00 11111111 1222223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||++++ .+.+.++||+.+.
T Consensus 126 -------~~~iiH~dl~p~Nili~~-~~~~~l~dfg~~~ 156 (328)
T cd07856 126 -------SAGVVHRDLKPSNILINE-NCDLKICDFGLAR 156 (328)
T ss_pred -------hCCcccCCCCHHHEeECC-CCCEEeCcccccc
Confidence 124899999999999987 4679999998764
No 358
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.02 E-value=0.0027 Score=56.44 Aligned_cols=29 Identities=24% Similarity=0.359 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 138 ~ivHrdikp~Nil~~~~-~~~kl~Dfg~~~ 166 (343)
T cd07878 138 GIIHRDLKPSNVAVNED-CELRILDFGLAR 166 (343)
T ss_pred CeecccCChhhEEECCC-CCEEEcCCccce
Confidence 58999999999999874 689999998764
No 359
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=97.02 E-value=0.0071 Score=51.38 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=25.5
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 133 ~i~H~dlkp~Nil~~~~-~~~kl~dfg~~~ 161 (273)
T cd05035 133 NFIHRDLAARNCMLRED-MTVCVADFGLSK 161 (273)
T ss_pred CeeccccchheEEECCC-CeEEECCcccee
Confidence 48999999999999874 679999999875
No 360
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=97.02 E-value=0.0049 Score=55.06 Aligned_cols=134 Identities=17% Similarity=0.173 Sum_probs=75.0
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccChHHHHHHHHHHHhCCCCceEEEEEC---------
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFNRDDEIRTFECMSSQGQGPRLLGRFG--------- 106 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--------- 106 (267)
.+..|..|..+.+|++.... .+..+++|...... .......+|+.+++.+..-++.+ ++..+.
T Consensus 20 ~~~~lg~g~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~~~~ 94 (353)
T cd07850 20 NLKPIGSGAQGIVCAAYDTV----TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIG-LLNVFTPQKSLEEFQ 94 (353)
T ss_pred EEEEeccCCCEEEEEEEECC----CCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcc-eeeeeccCCCccccC
Confidence 46778888889999997543 35789999864321 11111135777777775544433 333321
Q ss_pred C-eeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHH
Q 024452 107 D-GRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEI 185 (267)
Q Consensus 107 ~-~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (267)
. .+|++|++|. +. ..+ +.. . + ...+..+.. .+...+
T Consensus 95 ~~~lv~e~~~~~-l~----------~~~-------~~~-l------~-~~~~~~~~~-----------------ql~~aL 131 (353)
T cd07850 95 DVYLVMELMDAN-LC----------QVI-------QMD-L------D-HERMSYLLY-----------------QMLCGI 131 (353)
T ss_pred cEEEEEeccCCC-HH----------HHH-------hhc-C------C-HHHHHHHHH-----------------HHHHHH
Confidence 1 2778888651 11 000 000 0 0 001111111 122222
Q ss_pred HHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 186 SMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 186 ~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+.|-. ..++|+|++|.||+++++ +.+.|+||..+.
T Consensus 132 ~~LH~--------~gi~H~dlkp~Nil~~~~-~~~kL~Dfg~~~ 166 (353)
T cd07850 132 KHLHS--------AGIIHRDLKPSNIVVKSD-CTLKILDFGLAR 166 (353)
T ss_pred HHHHh--------CCeeeCCCCHHHEEECCC-CCEEEccCccce
Confidence 33322 258999999999999874 689999998775
No 361
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.01 E-value=0.0024 Score=55.66 Aligned_cols=135 Identities=13% Similarity=0.103 Sum_probs=73.4
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccccc-ChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFF-NRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEFI 114 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~i 114 (267)
+..|..|..+.+|++.... .+..+++|.......... ...+|+.+++.+..-++ +++++.+. +. ++++|+
T Consensus 26 ~~~ig~g~~g~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i-~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKH----SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNV-VEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred hhhcCCCCceeEEEEEEcC----CCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCch-hhhhhheeeCCeEEEEEecC
Confidence 4456777788999987532 357888888643221111 11356666655543232 33443332 22 789999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. +. . ... .. ...+..+..+ +...+..+.
T Consensus 101 ~~~~L~~-------~~-------~---~~~------~~-~~~~~~~~~q-----------------i~~~L~~LH----- 134 (297)
T cd06659 101 QGGALTD-------IV-------S---QTR------LN-EEQIATVCES-----------------VLQALCYLH----- 134 (297)
T ss_pred CCCCHHH-------HH-------h---hcC------CC-HHHHHHHHHH-----------------HHHHHHHHH-----
Confidence 8755431 10 0 000 00 1112222211 122223332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|+||+++++ +.+.|+||+.+.
T Consensus 135 ---~~~ivH~dl~p~Nill~~~-~~~kL~dfg~~~ 165 (297)
T cd06659 135 ---SQGVIHRDIKSDSILLTLD-GRVKLSDFGFCA 165 (297)
T ss_pred ---hCCeecCCCCHHHeEEccC-CcEEEeechhHh
Confidence 2348999999999999874 689999998764
No 362
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=97.00 E-value=0.0029 Score=53.53 Aligned_cols=29 Identities=28% Similarity=0.269 Sum_probs=25.3
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 118 ~i~H~dlk~~nili~~~-~~~kl~dfg~~~ 146 (262)
T cd05058 118 KFVHRDLAARNCMLDES-FTVKVADFGLAR 146 (262)
T ss_pred CccccccCcceEEEcCC-CcEEECCccccc
Confidence 58999999999999874 678999999774
No 363
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.00 E-value=0.0015 Score=58.19 Aligned_cols=82 Identities=21% Similarity=0.192 Sum_probs=47.7
Q ss_pred EEEEecCceeeeeEEEEeCCCC-CCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEE--CCe---eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKN-NGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRF--GDG---RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~-~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~---~v 110 (267)
-...|..|....||++...... ...+..+.+|+...... ..-...+|+.++..+..+.-..++++.. .++ ++
T Consensus 11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv 90 (343)
T cd05103 11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 90 (343)
T ss_pred ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEE
Confidence 3556778888999998632110 01246788888654321 1111236888888876543334444432 222 78
Q ss_pred EEeecCCCCC
Q 024452 111 EEFIHARTLS 120 (267)
Q Consensus 111 ~e~i~G~~l~ 120 (267)
+||++|.++.
T Consensus 91 ~ey~~~g~L~ 100 (343)
T cd05103 91 VEFCKFGNLS 100 (343)
T ss_pred EeccCCCcHH
Confidence 9999987664
No 364
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.99 E-value=0.0067 Score=53.67 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=25.3
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|+|||++++ +.+.|+||..|.
T Consensus 125 givH~dlkp~Nili~~~-~~~kl~Dfg~a~ 153 (332)
T cd07857 125 NVLHRDLKPGNLLVNAD-CELKICDFGLAR 153 (332)
T ss_pred CcccCCCCHHHeEEcCC-CCEEeCcCCCce
Confidence 48999999999999874 679999999774
No 365
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=96.97 E-value=0.005 Score=52.27 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=73.7
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccc------c-ChHHHHHHHHHHHhCCCCceEEEEEC-Ce---e
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVF------F-NRDDEIRTFECMSSQGQGPRLLGRFG-DG---R 109 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~------~-dr~~E~~~~~~l~~~gl~P~v~~~~~-~~---~ 109 (267)
..|..|.-+.+|++... ++..+++|......... . ...+|+++++.+..-++ ++.++.+. +. +
T Consensus 6 ~~ig~g~~~~v~~~~~~-----~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~l 79 (265)
T cd06631 6 EVLGKGAYGTVYCGLTN-----QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNI-VQYLGTCLDDNTISI 79 (265)
T ss_pred ceEeccCCeEEEEEEEc-----CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCE-eeEeeEeecCCeEEE
Confidence 34566777899998642 24678888654322110 1 11356667766654333 34444433 22 8
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
++||++|.++.. .+.+-+. . ....+..+..+ +...++.+-
T Consensus 80 v~e~~~~~~L~~--------------~l~~~~~--~-------~~~~~~~~~~q-----------------i~~~l~~lH 119 (265)
T cd06631 80 FMEFVPGGSISS--------------ILNRFGP--L-------PEPVFCKYTKQ-----------------ILDGVAYLH 119 (265)
T ss_pred EEecCCCCcHHH--------------HHHhcCC--C-------CHHHHHHHHHH-----------------HHHHHHHHH
Confidence 899999875531 1111010 0 01122222221 112223332
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||++++ .+.+.++||..+.
T Consensus 120 --------~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~ 150 (265)
T cd06631 120 --------NNCVVHRDIKGNNVMLMP-NGIIKLIDFGCAR 150 (265)
T ss_pred --------hCCcccCCcCHHhEEECC-CCeEEeccchhhH
Confidence 123899999999999986 4689999998764
No 366
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=96.95 E-value=0.0079 Score=56.69 Aligned_cols=29 Identities=14% Similarity=0.072 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++.+ +.+.|+||..+.
T Consensus 163 ~IiHrDLKP~NILl~~~-~~vkL~DFGls~ 191 (496)
T PTZ00283 163 HMIHRDIKSANILLCSN-GLVKLGDFGFSK 191 (496)
T ss_pred CEecCCCCHHHEEEeCC-CCEEEEecccCe
Confidence 58999999999999974 689999998763
No 367
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=96.95 E-value=0.0082 Score=53.16 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=25.3
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 127 ~i~H~dl~p~nill~~~-~~~kl~d~g~~~ 155 (337)
T cd07852 127 NVIHRDLKPSNILLNSD-CRVKLADFGLAR 155 (337)
T ss_pred CeecCCCCHHHEEEcCC-CcEEEeeccchh
Confidence 58999999999999974 689999998664
No 368
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=96.95 E-value=0.0033 Score=54.06 Aligned_cols=29 Identities=21% Similarity=0.155 Sum_probs=25.1
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||++++ ++.+.++||..+.
T Consensus 129 ~iiH~dlkp~nili~~-~~~~kl~Dfg~~~ 157 (279)
T cd05111 129 RMVHRNLAARNILLKS-DSIVQIADFGVAD 157 (279)
T ss_pred CEeccccCcceEEEcC-CCcEEEcCCccce
Confidence 3899999999999987 4678999998763
No 369
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=96.93 E-value=0.0083 Score=51.12 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=23.9
Q ss_pred EEEEccCCCCCCeeeeCCCC------CEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETS------SITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~------~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++.++. .+.++||..+.
T Consensus 124 ~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 124 KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred CCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 35899999999999975321 27889998764
No 370
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=96.92 E-value=0.0083 Score=51.63 Aligned_cols=29 Identities=21% Similarity=0.211 Sum_probs=25.0
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++.+ +.+.|+||..+.
T Consensus 128 ~i~H~dlkp~Nil~~~~-~~~kl~dfg~~~ 156 (288)
T cd06616 128 KIIHRDVKPSNILLDRN-GNIKLCDFGISG 156 (288)
T ss_pred CeeccCCCHHHEEEccC-CcEEEeecchhH
Confidence 48999999999999874 679999998763
No 371
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=96.89 E-value=0.027 Score=48.16 Aligned_cols=149 Identities=17% Similarity=0.171 Sum_probs=75.9
Q ss_pred EEEecCceeeeeEEEEeCCC-CCCCCceEEEEEcCCCcc--cccChHHHHHHHHHHHhCCCCceEEEEECCe----eEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAK-NNGLARNVLVRIYGEGVE--VFFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~-~~~~~~~~vlRi~~~~~~--~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e 112 (267)
...+..|....+|+...... ....+..+.+|....... ......+|..+++.+...++ .++++....+ ++++
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-v~~~~~~~~~~~~~lv~e 89 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV-VRLLGVVSQGQPTLVIME 89 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-eeEEEEEcCCCCeEEEEe
Confidence 34556676789998764310 011245788887643221 11111356676666643333 4455555432 7899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCC-CCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGP-RKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
|++|.++.. .+.+.+....... .....+..+..+.. .+...+..+-+
T Consensus 90 ~~~~~~L~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~l~~~l~~lH~- 137 (277)
T cd05062 90 LMTRGDLKS--------------YLRSLRPEMENNPVQAPPSLKKMIQMAG-----------------EIADGMAYLNA- 137 (277)
T ss_pred cCCCCCHHH--------------HHHHcCccccccccccCCCHHHHHHHHH-----------------HHHHHHHHHHH-
Confidence 998765431 1111111100000 00011111111111 12223333321
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||+++++ +.+.++||..+.
T Consensus 138 -------~~~vH~dlkp~Nil~~~~-~~~~l~dfg~~~ 167 (277)
T cd05062 138 -------NKFVHRDLAARNCMVAED-FTVKIGDFGMTR 167 (277)
T ss_pred -------CCcccCCcchheEEEcCC-CCEEECCCCCcc
Confidence 248999999999999974 679999999764
No 372
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=96.85 E-value=0.013 Score=51.20 Aligned_cols=143 Identities=13% Similarity=0.073 Sum_probs=77.2
Q ss_pred EEEecCceeeeeEEEEeCCC-CCCCCceEEEEEcCCCcc-c-ccChHHHHHHHHHHHhCCCCceEEEEEC-C---eeEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAK-NNGLARNVLVRIYGEGVE-V-FFNRDDEIRTFECMSSQGQGPRLLGRFG-D---GRVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~-~~~~~~~~vlRi~~~~~~-~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~-~---~~v~e 112 (267)
...|..|....+|+++.... .......+.+|....... . ......|.++++.+.++.-..++++.+. + .+++|
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 119 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE 119 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEE
Confidence 34566677789999863110 011235677887654321 1 1112468888888855544444555443 2 28899
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|++|.++.. . ++..... .-....+..+.. .+...+..+-
T Consensus 120 ~~~~~~L~~--------------~---i~~~~~~----~l~~~~~~~i~~-----------------~i~~~l~~lH--- 158 (302)
T cd05055 120 YCCYGDLLN--------------F---LRRKRES----FLTLEDLLSFSY-----------------QVAKGMAFLA--- 158 (302)
T ss_pred cCCCCcHHH--------------H---HHhCCCC----CCCHHHHHHHHH-----------------HHHHHHHHHH---
Confidence 998766532 0 1111000 001111222211 1222233332
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||++++ ++.+.++||..+.
T Consensus 159 -----~~~ivH~dlkp~Nil~~~-~~~~~l~dfg~~~ 189 (302)
T cd05055 159 -----SKNCIHRDLAARNVLLTH-GKIVKICDFGLAR 189 (302)
T ss_pred -----HCCeehhhhccceEEEcC-CCeEEECCCcccc
Confidence 124899999999999986 4678899998764
No 373
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=96.83 E-value=0.013 Score=50.10 Aligned_cols=29 Identities=31% Similarity=0.355 Sum_probs=25.3
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.++||..+.
T Consensus 137 ~i~H~di~p~nil~~~~-~~~kl~d~g~~~ 165 (280)
T cd05043 137 GVIHKDIAARNCVIDEE-LQVKITDNALSR 165 (280)
T ss_pred CEeecccCHhhEEEcCC-CcEEECCCCCcc
Confidence 58999999999999864 678999999874
No 374
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=96.82 E-value=0.006 Score=52.92 Aligned_cols=29 Identities=21% Similarity=0.281 Sum_probs=25.3
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||++++ .+.+.|+||..+.
T Consensus 135 ~i~H~dl~p~nill~~-~~~~kL~dfg~~~ 163 (296)
T cd06618 135 GVIHRDVKPSNILLDA-SGNVKLCDFGISG 163 (296)
T ss_pred CEecCCCcHHHEEEcC-CCCEEECccccch
Confidence 5899999999999986 4689999998764
No 375
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=96.81 E-value=0.01 Score=51.22 Aligned_cols=30 Identities=20% Similarity=0.196 Sum_probs=25.9
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.||++++ ++.+.|.||..+.
T Consensus 146 ~~ivH~dikp~nill~~-~~~~kl~dfg~~~ 175 (290)
T cd05045 146 MKLVHRDLAARNVLVAE-GRKMKISDFGLSR 175 (290)
T ss_pred CCeehhhhhhheEEEcC-CCcEEeccccccc
Confidence 45999999999999987 4678999998874
No 376
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=96.78 E-value=0.019 Score=50.36 Aligned_cols=137 Identities=12% Similarity=0.075 Sum_probs=74.6
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc---cc-cChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE---VF-FNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~---~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v 110 (267)
.+..+..|..+.+|++.... .+..+++|....... .. .+...|.++++.+..-++ ++.++... +. ++
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~----~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv 99 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSH----TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNT-IEYKGCYLKEHTAWLV 99 (313)
T ss_pred cceeeccCCCeEEEEEEECC----CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCC-ccEEEEEEeCCEEEEE
Confidence 34557778788999997543 357888887653221 11 112357777777654333 33444432 22 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|+.|.... .. .....+ .+ ......+.. .+...+..+.+
T Consensus 100 ~e~~~~~l~~--------~l----------~~~~~~----l~-~~~~~~~~~-----------------qi~~al~~LH~ 139 (313)
T cd06633 100 MEYCLGSASD--------LL----------EVHKKP----LQ-EVEIAAITH-----------------GALQGLAYLHS 139 (313)
T ss_pred EecCCCCHHH--------HH----------HhcCCC----CC-HHHHHHHHH-----------------HHHHHHHHHHH
Confidence 9998652111 00 000000 01 111111211 12223333322
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|+||+++++ +.+.|+||+.+.
T Consensus 140 --------~gi~H~dl~p~nili~~~-~~~kL~dfg~~~ 169 (313)
T cd06633 140 --------HNMIHRDIKAGNILLTEP-GQVKLADFGSAS 169 (313)
T ss_pred --------CCeecCCCChhhEEECCC-CCEEEeecCCCc
Confidence 248999999999999874 679999998765
No 377
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=96.78 E-value=0.014 Score=49.72 Aligned_cols=29 Identities=24% Similarity=0.251 Sum_probs=25.2
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 132 ~i~H~dlkp~Nil~~~~-~~~kl~Dfg~~~ 160 (272)
T cd05075 132 SFIHRDLAARNCMLNEN-MNVCVADFGLSK 160 (272)
T ss_pred CeeccccchhheEEcCC-CCEEECCCCccc
Confidence 48999999999999874 679999998765
No 378
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=96.77 E-value=0.0092 Score=53.09 Aligned_cols=29 Identities=28% Similarity=0.430 Sum_probs=25.5
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++.+ +.+.|+||+.+.
T Consensus 137 ~i~H~dlkp~NIll~~~-~~~kL~dfg~~~ 165 (342)
T cd07879 137 GIIHRDLKPGNLAVNED-CELKILDFGLAR 165 (342)
T ss_pred CcccCCCCHHHEEECCC-CCEEEeeCCCCc
Confidence 48999999999999874 789999998774
No 379
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=96.76 E-value=0.0088 Score=50.95 Aligned_cols=140 Identities=14% Similarity=0.052 Sum_probs=75.7
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cc-cChHHHHHHHHHHHhCCCCceEEEEECC---eeEEEee
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VF-FNRDDEIRTFECMSSQGQGPRLLGRFGD---GRVEEFI 114 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~-~dr~~E~~~~~~l~~~gl~P~v~~~~~~---~~v~e~i 114 (267)
...+..|-...+|++...... +....+.+|.+..... .. ....+|..+++.+....+ .+.++...+ .++++|.
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~-~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~lv~e~~ 88 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPE-NEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHI-VKLIGVITENPVWIVMELA 88 (270)
T ss_pred eeeeCCccceeEEEEEEecCC-CCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCch-hceeEEEcCCCcEEEEEcC
Confidence 345677778899998753211 1235678887754431 11 112367777777754333 334554433 2788888
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|.++.. .. .+ . .. ... ...+..+.. .+...++.+-
T Consensus 89 ~~~~L~~-------~l-------~~---~---~~-~~~-~~~~~~~~~-----------------~l~~~l~~lH----- 124 (270)
T cd05056 89 PLGELRS-------YL-------QV---N---KY-SLD-LASLILYSY-----------------QLSTALAYLE----- 124 (270)
T ss_pred CCCcHHH-------HH-------Hh---C---CC-CCC-HHHHHHHHH-----------------HHHHHHHHHH-----
Confidence 8755532 11 00 0 00 000 111111111 1222223332
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.||+++.+ +.+.++||+.+.
T Consensus 125 ---~~~~~H~dl~p~nili~~~-~~~~l~d~g~~~ 155 (270)
T cd05056 125 ---SKRFVHRDIAARNVLVSSP-DCVKLGDFGLSR 155 (270)
T ss_pred ---hCCeeccccChheEEEecC-CCeEEccCceee
Confidence 2348999999999999874 689999998764
No 380
>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.75 E-value=0.013 Score=50.56 Aligned_cols=110 Identities=14% Similarity=0.133 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHhhccCCCCCC------CCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH----HhCC--C
Q 024452 127 PKISELVAAKMREFHDLKMPGP------RKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE----KELP--N 194 (267)
Q Consensus 127 ~~i~~~la~~La~lH~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~----~~l~--~ 194 (267)
++...++|+.++++|+.....+ ....+.-.++.-+++........ .....++.++...+..- ..+. .
T Consensus 126 ~~~l~~lak~vA~fH~~a~~n~~i~~~G~~~~~~~~~~eN~~q~~~~l~~~-~s~~~~d~i~~~t~~f~e~~~~lf~~R~ 204 (337)
T COG2187 126 ESLLDALAKVVARFHQRAPRNPCIDSFGEVGAVAYRVRENFAQTRKYLGIV-QSKQQIDRIEHMTEEFLERHGPLFDRRI 204 (337)
T ss_pred HHHHHHHHHHHHHHhhcCCCCccccccCCHHHHHhHHHhhHHHHhhhcCcc-cCHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 4567899999999999765311 11122223333233322111110 01111233333222211 1111 1
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEee---cc-cCcchHhHHHHh
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVS---FT-FLQNMLNFKRAC 239 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDw---E~-a~~~~~~fD~A~ 239 (267)
.....+=||||+|.+||.+-+ +++.|+|- .. -.+.+..||.|.
T Consensus 205 ~~g~IRecHGDLhl~ni~l~d--g~~~LFDCIEFNd~fr~iDv~~D~AF 251 (337)
T COG2187 205 AEGFIRECHGDLHLRNICLWD--GEPALFDCIEFNDPFRFIDVLYDLAF 251 (337)
T ss_pred hcCCceecccchhhcceeeec--CcceEEEEeecCCcchHHHHHHHHHH
Confidence 366788999999999999874 56777663 32 245777788664
No 381
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=96.74 E-value=0.0057 Score=55.63 Aligned_cols=139 Identities=17% Similarity=0.157 Sum_probs=81.0
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEEC--Ce--eEEEe
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFG--DG--RVEEF 113 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~e~ 113 (267)
.+..|.-..||++.... .+..+-+|+-.+.. ....+..+|+++++.++.+--.-.++..++ +. +|+|+
T Consensus 42 ~lG~G~Fg~v~~~~~~~----tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL 117 (382)
T KOG0032|consen 42 ELGRGQFGVVYLCREKS----TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMEL 117 (382)
T ss_pred hhCCCCceEEEEEEecC----CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEe
Confidence 56788888999998653 25677777653321 111233689999999986433333444443 22 88999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|..+- ..+.+. | . .+.+ -.... ..+.+.+..+
T Consensus 118 ~~GGeLf----------d~i~~~----~-~-----sE~d----a~~~~-----------------~~il~av~~l----- 151 (382)
T KOG0032|consen 118 CEGGELF----------DRIVKK----H-Y-----SERD----AAGII-----------------RQILEAVKYL----- 151 (382)
T ss_pred cCCchHH----------HHHHHc----c-C-----CHHH----HHHHH-----------------HHHHHHHHHH-----
Confidence 9975442 122222 1 1 0000 00001 1112222222
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCC---CCEEEEeecccCcchH
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEET---SSITIIVSFTFLQNML 233 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~---~~v~lIDwE~a~~~~~ 233 (267)
+..+++|+|++|.|+|+.... +.+.++||..|.+...
T Consensus 152 ---H~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 152 ---HSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred ---HhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 227799999999999997642 3699999999986443
No 382
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=96.72 E-value=0.021 Score=51.60 Aligned_cols=136 Identities=20% Similarity=0.201 Sum_probs=78.4
Q ss_pred ecCceeeeeEEEEeCCCCCCCCce-EEEEEcCCCcc---cccChHHHHHHHHHHHhCCCCceEEEEEC--C---eeEEEe
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARN-VLVRIYGEGVE---VFFNRDDEIRTFECMSSQGQGPRLLGRFG--D---GRVEEF 113 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~-~vlRi~~~~~~---~~~dr~~E~~~~~~l~~~gl~P~v~~~~~--~---~~v~e~ 113 (267)
+..|.-.+||+..+.+ .. +.+|+...... ...+-.+|+.++..|..-.+.. .++... . ++|+||
T Consensus 49 iG~G~~g~V~~~~~~g------~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~-f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWRG------TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQ-FYGACTSPPGSLCIVTEY 121 (362)
T ss_pred cccCCceeEEEEEeCC------ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeee-EEEEEcCCCCceEEEEEe
Confidence 5668789999998753 44 77887765321 1111247888888876644333 444432 2 389999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++|..+..- +|.. . .....+...+ .|.- .+..-+++|-.
T Consensus 122 ~~~GsL~~~-----------------l~~~-~--~~~l~~~~~l-~~al-----------------diArGm~YLH~--- 160 (362)
T KOG0192|consen 122 MPGGSLSVL-----------------LHKK-R--KRKLPLKVRL-RIAL-----------------DIARGMEYLHS--- 160 (362)
T ss_pred CCCCcHHHH-----------------Hhhc-c--cCCCCHHHHH-HHHH-----------------HHHHHHHHHhc---
Confidence 998776531 1111 0 0011111111 1211 12223344432
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..+ ++|+||++.|||++.+...+.|-||..+..
T Consensus 161 --~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 161 --EGP--IIHRDLKSDNILVDLKGKTLKIADFGLSRE 193 (362)
T ss_pred --CCC--eeecccChhhEEEcCCCCEEEECCCcccee
Confidence 222 999999999999997422688999998854
No 383
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=96.71 E-value=0.0052 Score=54.37 Aligned_cols=141 Identities=12% Similarity=0.138 Sum_probs=80.3
Q ss_pred CcEE-EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEECCe--
Q 024452 36 DALQ-VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFGDG-- 108 (267)
Q Consensus 36 ~~~~-i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~-- 108 (267)
++++ +..|..|--..||.|.-.+ .++-|.+|+-.+.. +..-...+|..++..+ ++-+-..+++.+.++
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~d----t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~k 99 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKD----TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEK 99 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcc----cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCe
Confidence 4555 4445777789999998543 35778888765421 0000113566666663 222223344445433
Q ss_pred --eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHH
Q 024452 109 --RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEIS 186 (267)
Q Consensus 109 --~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 186 (267)
+|.+|+.|..+-.. |.+ +..+.+...+++- ..+.-.++
T Consensus 100 LylVld~~~GGeLf~h-----------------L~~-------eg~F~E~~arfYl----------------aEi~lAL~ 139 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYH-----------------LQR-------EGRFSEDRARFYL----------------AEIVLALG 139 (357)
T ss_pred EEEEEeccCCccHHHH-----------------HHh-------cCCcchhHHHHHH----------------HHHHHHHH
Confidence 88999998655320 000 0011122222221 12223334
Q ss_pred HHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 187 MLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 187 ~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.| +...++|+|++|.|||++.+ |-+.|-||..|..
T Consensus 140 ~L--------H~~gIiyRDlKPENILLd~~-GHi~LtDFgL~k~ 174 (357)
T KOG0598|consen 140 YL--------HSKGIIYRDLKPENILLDEQ-GHIKLTDFGLCKE 174 (357)
T ss_pred HH--------HhCCeeeccCCHHHeeecCC-CcEEEeccccchh
Confidence 44 33459999999999999985 6799999998874
No 384
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=96.66 E-value=0.0039 Score=53.29 Aligned_cols=135 Identities=15% Similarity=0.059 Sum_probs=72.9
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--ccc-cChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEEEe
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVF-FNRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVEEF 113 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~-~dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~e~ 113 (267)
..+..|..+.+|++.... .+..+++|+..... ... .....|+.+++.+...++. ++++.. .+. ++++|
T Consensus 5 ~~ig~g~~~~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~-~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 5 EKLGEGTYGVVYKARDKK----TGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIV-KLLDVIHTERKLYLVFEY 79 (282)
T ss_pred hcccccCcceEEEeeecC----CCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHH-HHHhhhhcCCceEEEecC
Confidence 345667788999997643 35789999876542 111 1123677777777543332 222222 122 77888
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
.++ ++.. .+.+-. .+ .+ ......+.. .+...+..|.+
T Consensus 80 ~~~-~l~~--------------~i~~~~---~~----~~-~~~~~~~~~-----------------~i~~~l~~LH~--- 116 (282)
T cd07829 80 CDM-DLKK--------------YLDKRP---GP----LS-PNLIKSIMY-----------------QLLRGLAYCHS--- 116 (282)
T ss_pred cCc-CHHH--------------HHHhhc---cC----CC-HHHHHHHHH-----------------HHHHHHHHHHH---
Confidence 764 2211 111100 00 01 111111211 12222333332
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|+++.||++++ ++.+.|.||..+.
T Consensus 117 -----~~i~H~~l~~~ni~~~~-~~~~~l~d~g~~~ 146 (282)
T cd07829 117 -----HRILHRDLKPQNILINR-DGVLKLADFGLAR 146 (282)
T ss_pred -----CCcccCCCChheEEEcC-CCCEEEecCCccc
Confidence 24899999999999987 4689999998764
No 385
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=96.65 E-value=0.0081 Score=53.17 Aligned_cols=29 Identities=21% Similarity=0.238 Sum_probs=25.3
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|.||..+.
T Consensus 127 ~ivH~dlkp~Nil~~~~-~~~kl~dfg~~~ 155 (334)
T cd07855 127 NVIHRDLKPSNLLVNED-CELRIGDFGMAR 155 (334)
T ss_pred CeecCCCCHHHEEEcCC-CcEEecccccce
Confidence 48999999999999974 689999998763
No 386
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=96.63 E-value=0.015 Score=51.26 Aligned_cols=73 Identities=12% Similarity=0.088 Sum_probs=41.0
Q ss_pred ecCc--eeeeeEEEEeCCCCCCCCceEEEEEcCCCc--cccc-ChHHHHHHHHHHHhCCCCceEEEEE--CCe--eEEEe
Q 024452 43 LKGA--MTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVFF-NRDDEIRTFECMSSQGQGPRLLGRF--GDG--RVEEF 113 (267)
Q Consensus 43 l~~G--~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~--~~~--~v~e~ 113 (267)
|..| -...+|++.... ++..+.+|...... .... ....|+.+++.+..-.+.+ +++.+ ++. +|++|
T Consensus 6 ig~G~~~~~~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~-~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 6 IGRGFEDLMTVNLARYKP----TGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVP-YRATFIADNELWVVTSF 80 (327)
T ss_pred ccccccceEEEEEEeecc----cCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeee-EEEEEEECCEEEEEEec
Confidence 4455 246788887543 35778888764321 1111 1135777777775444433 44443 222 78999
Q ss_pred ecCCCCC
Q 024452 114 IHARTLS 120 (267)
Q Consensus 114 i~G~~l~ 120 (267)
++|.++.
T Consensus 81 ~~~~~l~ 87 (327)
T cd08227 81 MAYGSAK 87 (327)
T ss_pred cCCCcHH
Confidence 9876653
No 387
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=96.61 E-value=0.0086 Score=53.26 Aligned_cols=30 Identities=23% Similarity=0.154 Sum_probs=25.2
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++++||+++.++..+.++||..+.
T Consensus 134 givH~dikp~Nili~~~~~~~kl~dfg~~~ 163 (342)
T cd07854 134 NVLHRDLKPANVFINTEDLVLKIGDFGLAR 163 (342)
T ss_pred CcccCCCCHHHEEEcCCCceEEECCcccce
Confidence 489999999999998644567899998774
No 388
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=96.61 E-value=0.021 Score=50.93 Aligned_cols=29 Identities=21% Similarity=0.284 Sum_probs=25.1
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 140 ~ivH~dlkp~NIll~~~-~~~kl~dfg~~~ 168 (345)
T cd07877 140 DIIHRDLKPSNLAVNED-CELKILDFGLAR 168 (345)
T ss_pred CeeecCCChHHEEEcCC-CCEEEecccccc
Confidence 48999999999999974 689999998654
No 389
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=96.59 E-value=0.0036 Score=53.10 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=23.7
Q ss_pred EEEccCCCCCCeeeeCCCCC-------EEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSS-------ITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~-------v~lIDwE~a~ 229 (267)
.++|+|++|.||++++++.. +.+.||+.+.
T Consensus 120 ~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 120 GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 48999999999999864322 5789988663
No 390
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=96.57 E-value=0.037 Score=56.06 Aligned_cols=77 Identities=14% Similarity=0.065 Sum_probs=46.5
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc--cccc-ChHHHHHHHHHHHhCCCCceEEEEE--C--Ce--e
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV--EVFF-NRDDEIRTFECMSSQGQGPRLLGRF--G--DG--R 109 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~--~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~--~--~~--~ 109 (267)
-+..|..|-...||++.... .+..+.+|+..... .... ....|+.+++.|..-.+.+ ++..+ . +. +
T Consensus 17 Il~kLG~GgFGtVYLAkdk~----tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVr-l~d~f~de~~~~lyI 91 (1021)
T PTZ00266 17 VIKKIGNGRFGEVFLVKHKR----TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVR-YIDRFLNKANQKLYI 91 (1021)
T ss_pred EEEEEecCCCeEEEEEEECC----CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCe-EEEEEEecCCCEEEE
Confidence 45667778789999998643 24677777654321 1111 1136888888886544443 44432 2 22 7
Q ss_pred EEEeecCCCCC
Q 024452 110 VEEFIHARTLS 120 (267)
Q Consensus 110 v~e~i~G~~l~ 120 (267)
|++|++|.++.
T Consensus 92 VMEY~~gGSL~ 102 (1021)
T PTZ00266 92 LMEFCDAGDLS 102 (1021)
T ss_pred EEeCCCCCcHH
Confidence 89999987663
No 391
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=96.52 E-value=0.019 Score=52.67 Aligned_cols=80 Identities=14% Similarity=0.101 Sum_probs=47.1
Q ss_pred EEecCceeeeeEEEEeCCC-CCCCCceEEEEEcCCCccc-cc-ChHHHHHHHHHHHhCCCCceEEEEECC-e---eEEEe
Q 024452 41 IPLKGAMTNEVYQIAWPAK-NNGLARNVLVRIYGEGVEV-FF-NRDDEIRTFECMSSQGQGPRLLGRFGD-G---RVEEF 113 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~-~~~~~~~~vlRi~~~~~~~-~~-dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v~e~ 113 (267)
..|..|....||++..... .......+.+|+....... .. .-.+|..++..+..+--..++++.+.. + +|+||
T Consensus 43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~ 122 (401)
T cd05107 43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEY 122 (401)
T ss_pred hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEec
Confidence 5678888999999975320 0012357888987543211 11 113677777777644333445555432 2 88999
Q ss_pred ecCCCCC
Q 024452 114 IHARTLS 120 (267)
Q Consensus 114 i~G~~l~ 120 (267)
++|..+.
T Consensus 123 ~~~g~L~ 129 (401)
T cd05107 123 CRYGDLV 129 (401)
T ss_pred cCCCcHH
Confidence 9987653
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=96.49 E-value=0.0008 Score=56.24 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=30.8
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcch
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM 232 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~ 232 (267)
...++.|+|.+|.|+|++....++.+|||..|.+-.
T Consensus 149 HS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 149 HSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred HhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 557799999999999999876789999999886533
No 393
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=96.37 E-value=0.0045 Score=59.11 Aligned_cols=140 Identities=18% Similarity=0.184 Sum_probs=77.4
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccCh---HHHHHHHHHHHhCCCC-------ceEEEEECCe-
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNR---DDEIRTFECMSSQGQG-------PRLLGRFGDG- 108 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr---~~E~~~~~~l~~~gl~-------P~v~~~~~~~- 108 (267)
-+.+..|....||+-.... .|..+.+|.+++.. ..-+| -+|+++++.|....++ +...+.....
T Consensus 18 ~e~LG~Ga~g~V~rgrnke----tG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKE----TGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred hhhhcCCccceeeeecccc----cccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 3456778889999987443 35777788776532 12222 2799999998843321 1111111112
Q ss_pred -eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHH
Q 024452 109 -RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISM 187 (267)
Q Consensus 109 -~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 187 (267)
.++||..|..+.. .+.+|+-+. .-+. . .++.. +..+...+..
T Consensus 93 vlvmEyC~gGsL~~-~L~~PEN~~-----------------GLpE--~---e~l~l--------------L~d~~~al~~ 135 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRK-VLNSPENAY-----------------GLPE--S---EFLDL--------------LSDLVSALRH 135 (732)
T ss_pred eEEEeecCCCcHHH-HhcCccccc-----------------CCCH--H---HHHHH--------------HHHHHHHHHH
Confidence 6789998876643 122221100 0010 0 01111 1223334445
Q ss_pred HHHhCCCCCCcEEEEccCCCCCCeeeeCCC-CC--EEEEeecccC
Q 024452 188 LEKELPNDHQEIGFCHNDLQYGNIMIDEET-SS--ITIIVSFTFL 229 (267)
Q Consensus 188 l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~-~~--v~lIDwE~a~ 229 (267)
|++ ..+||+|++|+||+..... ++ ..|+||.+|.
T Consensus 136 LrE--------n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 136 LRE--------NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred HHH--------cCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 543 4599999999999986421 22 4699999885
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=96.32 E-value=0.0038 Score=51.52 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=29.7
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
+....++|+|.+|+|||++-+ |+|.+-||.-|++
T Consensus 165 ~~kL~vIHRDvKPsNiLIn~~-GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 165 HSKLSVIHRDVKPSNILINYD-GQVKICDFGISGY 198 (282)
T ss_pred HHHhhhhhccCCcceEEEccC-CcEEEccccccee
Confidence 345569999999999999974 7899999999987
No 395
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=96.29 E-value=0.0043 Score=58.47 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=32.7
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHH
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKR 237 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~ 237 (267)
..+.+|+||+|+|||++++.+.+.|+||.++..-.+.+|-
T Consensus 433 ~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~t 472 (612)
T KOG0603|consen 433 EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDT 472 (612)
T ss_pred hcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcc
Confidence 3789999999999999533467999999999887666553
No 396
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=96.22 E-value=0.038 Score=47.84 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=25.2
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++.+ +.+.|.||+.+.
T Consensus 139 ~i~H~dl~p~nil~~~~-~~~kl~dfg~~~ 167 (310)
T cd07865 139 KILHRDMKAANILITKD-GILKLADFGLAR 167 (310)
T ss_pred CeeccCCCHHHEEECCC-CcEEECcCCCcc
Confidence 48999999999999874 678999998764
No 397
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.21 E-value=0.06 Score=47.67 Aligned_cols=64 Identities=11% Similarity=0.038 Sum_probs=40.9
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccccc-ChHHHHHHHHHHHh-C--CCCceEEEEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFF-NRDDEIRTFECMSS-Q--GQGPRLLGRF 105 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~-dr~~E~~~~~~l~~-~--gl~P~v~~~~ 105 (267)
-...|..|.-+.+|.|..... ....+++|+-........ ....|..++..+.. . .-.|.++..+
T Consensus 22 i~~~iG~G~fG~V~~v~~~~~---~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G 89 (322)
T KOG1164|consen 22 LGKKIGEGGFGAVYLVSDKSE---KNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHG 89 (322)
T ss_pred EeeeccccCCceEEEEEecCC---CCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEec
Confidence 355667888999999985321 124688887654321111 12479999999985 2 2358888777
No 398
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=96.18 E-value=0.11 Score=44.04 Aligned_cols=143 Identities=15% Similarity=0.144 Sum_probs=78.5
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEe
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEF 113 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~ 113 (267)
...|..|.-..+|+++........+..+++|+....... ..+-.+|++.++.+ ++--..++++.... .+|+||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cccccccccccccccccccccccc
Confidence 345677777899999876211123578889988553221 11223677777777 44334556666532 288999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
.++.++.. ....- . .. ..+ ......|.. .+...+..|.+.
T Consensus 83 ~~~g~L~~-------~L~~~----------~--~~-~~~-~~~~~~i~~-----------------~i~~~l~~Lh~~-- 122 (259)
T PF07714_consen 83 CPGGSLDD-------YLKSK----------N--KE-PLS-EQQRLSIAI-----------------QIAEALSYLHSN-- 122 (259)
T ss_dssp -TTEBHHH-------HHHHT----------C--TT-TSB-HHHHHHHHH-----------------HHHHHHHHHHHT--
T ss_pred cccccccc-------ccccc----------c--cc-ccc-ccccccccc-----------------cccccccccccc--
Confidence 98765542 11100 0 00 011 112222222 223333445431
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
+ ++|+|+.+.||+++.+ +.+.|.||..+..
T Consensus 123 --~----iiH~~l~~~nill~~~-~~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 123 --N----IIHGNLSPSNILLDSN-GQVKLSDFGLSRP 152 (259)
T ss_dssp --T----EEEST-SGGGEEEETT-TEEEEESTTTGEE
T ss_pred --c----cccccccccccccccc-ccccccccccccc
Confidence 2 8999999999999974 6889999987754
No 399
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=96.17 E-value=0.11 Score=51.26 Aligned_cols=143 Identities=14% Similarity=0.190 Sum_probs=87.7
Q ss_pred CcEEE-EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC-------C
Q 024452 36 DALQV-IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG-------D 107 (267)
Q Consensus 36 ~~~~i-~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~-------~ 107 (267)
+...| ..+..|....+|+++... ++.-..+||-..+...-...+.|+.+++.+..+--.++-|+.+. +
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~----~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVK----TGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeee----cCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 34444 444778778999997433 35677888876654332233678999999988876777776641 1
Q ss_pred --eeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHH
Q 024452 108 --GRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEI 185 (267)
Q Consensus 108 --~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 185 (267)
|+||||..|.+++. |.+-+. . . .+.+ .|+.-+ +.+.+
T Consensus 95 qLWLVMEfC~gGSVTD-----------LVKn~~---g-----~---rl~E---~~IaYI----------------~re~l 133 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTD-----------LVKNTK---G-----N---RLKE---EWIAYI----------------LREIL 133 (953)
T ss_pred eEEEEeeccCCccHHH-----------HHhhhc---c-----c---chhh---HHHHHH----------------HHHHH
Confidence 38999999877653 111111 0 0 0001 122111 11111
Q ss_pred HHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 186 SMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 186 ~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.-+.+ -+....+|+|++-.|||.+.+ ++|.++||.-++
T Consensus 134 rgl~H-----LH~nkviHRDikG~NiLLT~e-~~VKLvDFGvSa 171 (953)
T KOG0587|consen 134 RGLAH-----LHNNKVIHRDIKGQNVLLTEN-AEVKLVDFGVSA 171 (953)
T ss_pred HHHHH-----HhhcceeeecccCceEEEecc-CcEEEeeeeeee
Confidence 12221 244568999999999999974 789999998664
No 400
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=96.12 E-value=0.028 Score=49.80 Aligned_cols=30 Identities=17% Similarity=0.200 Sum_probs=25.9
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.++|+|++|.||+++.+ +.+.|+||..+..
T Consensus 128 ~i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~ 157 (337)
T cd07858 128 NVLHRDLKPSNLLLNAN-CDLKICDFGLART 157 (337)
T ss_pred CEecCCCCHHHEEEcCC-CCEEECcCccccc
Confidence 48999999999999874 6799999997753
No 401
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=96.10 E-value=0.0059 Score=55.86 Aligned_cols=35 Identities=23% Similarity=0.314 Sum_probs=29.8
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++.++|+|++..|||+.+| ....|=||..|..
T Consensus 331 d~~Kp~IaHRDlkSkNVLvK~D-lTccIaDFGLAl~ 365 (534)
T KOG3653|consen 331 DHHKPPIAHRDLKSKNVLVKND-LTCCIADFGLALR 365 (534)
T ss_pred CCCCCccccccccccceEEccC-CcEEeeccceeEE
Confidence 3566889999999999999874 6778999999864
No 402
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.07 E-value=0.07 Score=51.06 Aligned_cols=139 Identities=17% Similarity=0.142 Sum_probs=85.4
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc----ccccChHHHHHHHHHHHhCCCCceEEEEECCe----eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV----EVFFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~----~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~ 111 (267)
+..+..|-=..|+.++... ++..|.+|+..++. +.......|..++..++++-+...++..+... .||
T Consensus 373 l~vLGkGsFGkV~lae~k~----~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvm 448 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKG----TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVM 448 (694)
T ss_pred EEEeccCcCceEEEEEEcC----CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEE
Confidence 4445667677888888754 35788899876653 11111246888998888776666666666432 899
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||+.|..+.... |.-. .+ +.-.+++.. .+.-.+..|
T Consensus 449 ey~~Ggdm~~~~-----------------~~~~------F~--e~rarfyaA----------------ev~l~L~fL--- 484 (694)
T KOG0694|consen 449 EYVAGGDLMHHI-----------------HTDV------FS--EPRARFYAA----------------EVVLGLQFL--- 484 (694)
T ss_pred EecCCCcEEEEE-----------------eccc------cc--HHHHHHHHH----------------HHHHHHHHH---
Confidence 999986632110 0000 00 111112221 111122333
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcch
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM 232 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~ 232 (267)
+...++++|++.+|||.|.+ |-+.|.||..|.-|.
T Consensus 485 -----H~~~IIYRDlKLdNiLLD~e-Gh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 485 -----HENGIIYRDLKLDNLLLDTE-GHVKIADFGLCKEGM 519 (694)
T ss_pred -----HhcCceeeecchhheEEccc-CcEEecccccccccC
Confidence 34569999999999999985 679999999997655
No 403
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=95.99 E-value=0.016 Score=49.04 Aligned_cols=29 Identities=21% Similarity=0.096 Sum_probs=24.5
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|+.|.||++++ +.+.++||..+.
T Consensus 125 ~~i~h~~l~~~nili~~--~~~~l~d~g~~~ 153 (260)
T cd08222 125 RRILHRDLKAKNIFLKN--NLLKIGDFGVSR 153 (260)
T ss_pred cCccccCCChhheEeec--CCEeecccCcee
Confidence 45899999999999984 468999998663
No 404
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=95.94 E-value=0.068 Score=54.43 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=44.7
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEECC----eeEEEeecC
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGD----GRVEEFIHA 116 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~----~~v~e~i~G 116 (267)
..+..|....||++.... ++..+++|....... . ...|++.++.+..-+ ..++++.+.+ .+|+||++|
T Consensus 696 ~~ig~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~-~--~~~~~~~l~~l~Hpn-Iv~~~~~~~~~~~~~lv~Ey~~~ 767 (968)
T PLN00113 696 NVISRGKKGASYKGKSIK----NGMQFVVKEINDVNS-I--PSSEIADMGKLQHPN-IVKLIGLCRSEKGAYLIHEYIEG 767 (968)
T ss_pred cEEccCCCeeEEEEEECC----CCcEEEEEEccCCcc-c--cHHHHHHHhhCCCCC-cceEEEEEEcCCCCEEEEeCCCC
Confidence 346777788999997542 357888887643221 1 135666666663333 3456666532 289999998
Q ss_pred CCCC
Q 024452 117 RTLS 120 (267)
Q Consensus 117 ~~l~ 120 (267)
..+.
T Consensus 768 g~L~ 771 (968)
T PLN00113 768 KNLS 771 (968)
T ss_pred CcHH
Confidence 6653
No 405
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.92 E-value=0.019 Score=54.79 Aligned_cols=135 Identities=16% Similarity=0.144 Sum_probs=75.9
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---cc-ccChHHHHHHHHHHHhCCCCceEEEEECCe----eEEEee
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EV-FFNRDDEIRTFECMSSQGQGPRLLGRFGDG----RVEEFI 114 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~e~i 114 (267)
+..|-+|.|=..+... .|+...+|+-.... +. ....++|+.+|+.+..-.+ =++|...++. +|.||+
T Consensus 20 LG~Gstg~vrlakh~~----TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnV-l~LydVwe~~~~lylvlEyv 94 (786)
T KOG0588|consen 20 LGKGSTGCVRLAKHAE----TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNV-LRLYDVWENKQHLYLVLEYV 94 (786)
T ss_pred ccCCCCceehhhhccc----ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCe-eeeeeeeccCceEEEEEEec
Confidence 4566677776665432 35777788764431 11 2223689999999977321 1233333322 789999
Q ss_pred cCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCC
Q 024452 115 HARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPN 194 (267)
Q Consensus 115 ~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 194 (267)
+|..+-..- .+ .++ .+. ..-.+|+.++ +.-+.
T Consensus 95 ~gGELFdyl------v~--------------kG~-l~e--~eaa~ff~QI--------------------i~gv~----- 126 (786)
T KOG0588|consen 95 PGGELFDYL------VR--------------KGP-LPE--REAAHFFRQI--------------------LDGVS----- 126 (786)
T ss_pred CCchhHHHH------Hh--------------hCC-CCC--HHHHHHHHHH--------------------HHHHH-----
Confidence 986553211 00 010 000 0111222221 11110
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcc
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQN 231 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~ 231 (267)
.=+...+||+|++|.|++++.. +.+.|=||..|+.-
T Consensus 127 yCH~~~icHRDLKpENlLLd~~-~nIKIADFGMAsLe 162 (786)
T KOG0588|consen 127 YCHAFNICHRDLKPENLLLDVK-NNIKIADFGMASLE 162 (786)
T ss_pred HHhhhcceeccCCchhhhhhcc-cCEeeeccceeecc
Confidence 1234569999999999999975 56999999998763
No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=95.92 E-value=0.1 Score=49.32 Aligned_cols=150 Identities=16% Similarity=0.202 Sum_probs=85.6
Q ss_pred CcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---c-cccCh-----HHHHHHHHHHHhCCC--CceEEEE
Q 024452 36 DALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---E-VFFNR-----DDEIRTFECMSSQGQ--GPRLLGR 104 (267)
Q Consensus 36 ~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~-~~~dr-----~~E~~~~~~l~~~gl--~P~v~~~ 104 (267)
+-.+++++..|....|+.+.... +...+|+|.-.+.. + -.-|| ..|+++|..|+++-= --+++.+
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~----n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKE----NNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred cceeeeeccccccceEEEeeecc----cceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence 34689999999999999997653 24677888654432 0 01122 379999999986532 2456666
Q ss_pred ECCe---eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhH
Q 024452 105 FGDG---RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTL 181 (267)
Q Consensus 105 ~~~~---~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 181 (267)
+++. .+.--+.|..++ +|+.++ ...++. + ..-
T Consensus 638 FEddd~yyl~te~hg~gID--------------------------------LFd~IE----~kp~m~-E--------~eA 672 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGID--------------------------------LFDFIE----FKPRMD-E--------PEA 672 (772)
T ss_pred eecCCeeEEEecCCCCCcc--------------------------------hhhhhh----ccCccc-h--------HHH
Confidence 6542 222223343332 222111 000000 0 000
Q ss_pred HHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc-chHhHH
Q 024452 182 KDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ-NMLNFK 236 (267)
Q Consensus 182 ~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~-~~~~fD 236 (267)
.-...++.... +.-++..++|+|++-.||+++.+ |-+.+|||.-|++ -.--||
T Consensus 673 k~IFkQV~agi-~hlh~~~ivhrdikdenvivd~~-g~~klidfgsaa~~ksgpfd 726 (772)
T KOG1152|consen 673 KLIFKQVVAGI-KHLHDQGIVHRDIKDENVIVDSN-GFVKLIDFGSAAYTKSGPFD 726 (772)
T ss_pred HHHHHHHHhcc-ccccccCceecccccccEEEecC-CeEEEeeccchhhhcCCCcc
Confidence 01112222221 12356789999999999999974 6799999999887 333355
No 407
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=95.84 E-value=0.0037 Score=54.24 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=27.0
Q ss_pred EEEEccCCCCCCeeeeCCCC--CEEEEeecccCcch
Q 024452 199 IGFCHNDLQYGNIMIDEETS--SITIIVSFTFLQNM 232 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~--~v~lIDwE~a~~~~ 232 (267)
..+.|+|++|.|+|+...+. .+.|-||.||....
T Consensus 180 ~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 180 MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred cchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 44889999999999986422 47899999997644
No 408
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=95.82 E-value=0.095 Score=48.48 Aligned_cols=134 Identities=21% Similarity=0.279 Sum_probs=80.4
Q ss_pred EEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccChHHHHHHHHHHHhCCCCceEEEEECC-e---eEEEe
Q 024452 41 IPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFNRDDEIRTFECMSSQGQGPRLLGRFGD-G---RVEEF 113 (267)
Q Consensus 41 ~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~~-~---~v~e~ 113 (267)
..|..|.=..||...+... .++-+|.-..+. ..+. +|+++|+.|+...++ +++++... + +|+||
T Consensus 212 ~~LG~G~FG~V~~g~~~~~-----~~vavk~ik~~~m~~~~f~---~Ea~iMk~L~H~~lV-~l~gV~~~~~piyIVtE~ 282 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGS-----TKVAVKTIKEGSMSPEAFL---REAQIMKKLRHEKLV-KLYGVCTKQEPIYIVTEY 282 (468)
T ss_pred HHhcCCccceEEEEEEcCC-----CcccceEEeccccChhHHH---HHHHHHHhCcccCeE-EEEEEEecCCceEEEEEe
Confidence 4467788888888887642 344455443332 2333 799999999875443 45665542 2 89999
Q ss_pred ecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCC
Q 024452 114 IHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELP 193 (267)
Q Consensus 114 i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 193 (267)
++-..+.. .|.+ |. ....+ ..++-.|..+ +.+-+++|++
T Consensus 283 m~~GsLl~--------------yLr~-~~-----~~~l~-~~~Ll~~a~q-----------------IaeGM~YLes--- 321 (468)
T KOG0197|consen 283 MPKGSLLD--------------YLRT-RE-----GGLLN-LPQLLDFAAQ-----------------IAEGMAYLES--- 321 (468)
T ss_pred cccCcHHH--------------Hhhh-cC-----CCccc-hHHHHHHHHH-----------------HHHHHHHHHh---
Confidence 97433321 1111 11 11111 1223333222 2334456654
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+||-..||||+++ ..+.|=||..|.+
T Consensus 322 -----~~~IHRDLAARNiLV~~~-~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 322 -----KNYIHRDLAARNILVDED-LVVKISDFGLARL 352 (468)
T ss_pred -----CCccchhhhhhheeeccC-ceEEEcccccccc
Confidence 349999999999999974 6889999999984
No 409
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.71 E-value=0.04 Score=50.95 Aligned_cols=138 Identities=12% Similarity=0.070 Sum_probs=77.8
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCC---cccccChHHHHHHHHHHHhCCCCc-eEEEEEC-Ce---eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEG---VEVFFNRDDEIRTFECMSSQGQGP-RLLGRFG-DG---RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~---~~~~~dr~~E~~~~~~l~~~gl~P-~v~~~~~-~~---~v 110 (267)
.+..|.+|.-..||+..... .+.-|.+|.-.-+ ....+--.+|+.+++.|..-.+.. +-+-+.. .+ +|
T Consensus 121 ki~kIGeGTyg~VYkAr~~~----tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 121 KIEKIGEGTYGQVYKARDLE----TGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHhcCcchhheeEeeecc----cCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 46678899999999997432 2445555433221 111222358999999997754321 1112222 22 88
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
+||++-.-. ..+ +.-.+.+. ..++.-|+.|+ ..-++.
T Consensus 197 FeYMdhDL~---------------GLl---~~p~vkft-----~~qIKc~mkQL-----------------l~Gl~~--- 233 (560)
T KOG0600|consen 197 FEYMDHDLS---------------GLL---SSPGVKFT-----EPQIKCYMKQL-----------------LEGLEY--- 233 (560)
T ss_pred Eecccchhh---------------hhh---cCCCcccC-----hHHHHHHHHHH-----------------HHHHHH---
Confidence 999873211 110 01000000 01233333322 111122
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
-+...+.|+|++..|||+|+ .+.+.|=||..|.
T Consensus 234 -----cH~~gvlHRDIK~SNiLidn-~G~LKiaDFGLAr 266 (560)
T KOG0600|consen 234 -----CHSRGVLHRDIKGSNILIDN-NGVLKIADFGLAR 266 (560)
T ss_pred -----HhhcCeeeccccccceEEcC-CCCEEecccccee
Confidence 24456999999999999997 4789999999997
No 410
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.70 E-value=0.054 Score=50.78 Aligned_cols=30 Identities=20% Similarity=0.249 Sum_probs=25.5
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..+++|.||+|.|+|+- .|.+.||||.-|.
T Consensus 478 ~~gIVHSDLKPANFLlV--kG~LKLIDFGIA~ 507 (677)
T KOG0596|consen 478 QHGIVHSDLKPANFLLV--KGRLKLIDFGIAN 507 (677)
T ss_pred HhceeecCCCcccEEEE--eeeEEeeeechhc
Confidence 34699999999999987 3689999999774
No 411
>PHA02882 putative serine/threonine kinase; Provisional
Probab=95.35 E-value=0.01 Score=51.50 Aligned_cols=29 Identities=31% Similarity=0.306 Sum_probs=25.4
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++++ +.+.|+||..|.
T Consensus 146 ~iiHrDiKp~Nill~~~-~~~~l~DFGla~ 174 (294)
T PHA02882 146 GISHGDIKPENIMVDGN-NRGYIIDYGIAS 174 (294)
T ss_pred CeecCCCCHHHEEEcCC-CcEEEEEcCCce
Confidence 58999999999999874 678999999874
No 412
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.30 E-value=0.14 Score=46.96 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=75.1
Q ss_pred CcEE-EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCC--cccccChHHHHHHHHHHHhCCCCceEEEEE--C--Ce
Q 024452 36 DALQ-VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEG--VEVFFNRDDEIRTFECMSSQGQGPRLLGRF--G--DG 108 (267)
Q Consensus 36 ~~~~-i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~--~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~--~--~~ 108 (267)
...+ ...|..|.+..||+....+. +..+-+|+.+=+ ...+-...+|.+.+.....=++.+ .+..+ . -|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~----~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~-~~~sFvv~~~LW 100 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPT----NEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVT-YHCSFVVDSELW 100 (516)
T ss_pred cceeEEEEEeccceeEeeeeeeccc----CCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcce-EEEEEEecceeE
Confidence 3344 44568899999999876542 467778876432 112222247777776665533322 11112 1 24
Q ss_pred eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHH
Q 024452 109 RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISML 188 (267)
Q Consensus 109 ~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 188 (267)
.||.|+.|..+.. +... ..|.+-.-. .+. ..+++.++-|
T Consensus 101 vVmpfMa~GS~ld-------Iik~-----------~~~~Gl~E~---~Ia--------------------~iLre~LkaL 139 (516)
T KOG0582|consen 101 VVMPFMAGGSLLD-------IIKT-----------YYPDGLEEA---SIA--------------------TILREVLKAL 139 (516)
T ss_pred EeehhhcCCcHHH-------HHHH-----------HccccccHH---HHH--------------------HHHHHHHHHH
Confidence 8888887654321 1110 001000000 000 1122222222
Q ss_pred HHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 189 EKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 189 ~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
. + -+..+-+|+|+++||||++.+ |.|.|=||..+
T Consensus 140 ~-Y----LH~~G~IHRdvKAgnILi~~d-G~VkLadFgvs 173 (516)
T KOG0582|consen 140 D-Y----LHQNGHIHRDVKAGNILIDSD-GTVKLADFGVS 173 (516)
T ss_pred H-H----HHhcCceecccccccEEEcCC-CcEEEcCceee
Confidence 1 1 134568999999999999984 78999999544
No 413
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=95.28 E-value=0.091 Score=46.31 Aligned_cols=27 Identities=15% Similarity=0.389 Sum_probs=22.7
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecc
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFT 227 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~ 227 (267)
.++|+|++|.||+++.+ +.+.+.||..
T Consensus 121 ~ivHrDlkp~Nill~~~-~~~~~~~~~~ 147 (328)
T cd08226 121 GYIHRNIKASHILISGD-GLVSLSGLSH 147 (328)
T ss_pred CeecCCCCHHHEEEeCC-CcEEEechHH
Confidence 58999999999999874 6788888753
No 414
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=95.19 E-value=0.023 Score=49.95 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=26.1
Q ss_pred CcEEEEccCCCCCCeeeeCCCC--CEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETS--SITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~--~v~lIDwE~a~ 229 (267)
+..++.|+|++|.|||....++ .|.|-|||.++
T Consensus 193 H~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS 227 (463)
T KOG0607|consen 193 HTKGIAHRDLKPENILCESPNKVSPVKICDFDLGS 227 (463)
T ss_pred hhcCcccccCCccceeecCCCCcCceeeecccccc
Confidence 3455999999999999875433 47899999875
No 415
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.14 E-value=0.25 Score=41.99 Aligned_cols=71 Identities=11% Similarity=0.113 Sum_probs=46.9
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCC-ceEEEEECCe----eEEE
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQG-PRLLGRFGDG----RVEE 112 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~-P~v~~~~~~~----~v~e 112 (267)
.-+.+|..|--...|.-.... .+..+.+|+-.+.... .....|..+-+.|.. |++ |.+.++..+. +||+
T Consensus 18 ~lvrkiGsGSFGdIy~~~~i~----~ge~VAiK~Es~~a~h-pqL~yEskvY~iL~~-g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 18 KLVRKIGSGSFGDIYLGISIT----SGEEVAIKLESSKAKH-PQLLYESKVYRILQG-GVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred EEEEeecCCchhheeeeeecc----CCceEEEEeecccCCC-cchhHHHHHHHHhcc-CCCCchhhhhccccccceeeee
Confidence 457788878778888876432 4689999997665432 111278888888865 554 7777766432 6666
Q ss_pred ee
Q 024452 113 FI 114 (267)
Q Consensus 113 ~i 114 (267)
.+
T Consensus 92 LL 93 (341)
T KOG1163|consen 92 LL 93 (341)
T ss_pred cc
Confidence 54
No 416
>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]
Probab=95.09 E-value=0.018 Score=50.95 Aligned_cols=27 Identities=19% Similarity=0.309 Sum_probs=23.3
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecc
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFT 227 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~ 227 (267)
..=+|||||.|-||+.+ +...+||||-
T Consensus 284 l~RvHGDLHLgQVLvt~--g~~~liDFEG 310 (438)
T COG3281 284 LQRVHGDLHLGQVLVTP--GRALLIDFEG 310 (438)
T ss_pred HHHHhccceehheeeeC--CcEEEEecCC
Confidence 44589999999999985 5799999994
No 417
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=95.06 E-value=0.01 Score=56.82 Aligned_cols=31 Identities=29% Similarity=0.344 Sum_probs=26.7
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..++|+|++|.|||++++.+.+.|+||..|.
T Consensus 274 ~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~ 304 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSGSFKIIDLGAAA 304 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCCcEEEEeCCCcc
Confidence 3599999999999998644679999999885
No 418
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=94.97 E-value=0.013 Score=50.40 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=29.6
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
+.+...+|+|.+|.|||+|+ .|.+.+-||.-++.
T Consensus 208 KeKH~viHRDvKPSNILlDe-~GniKlCDFGIsGr 241 (391)
T KOG0983|consen 208 KEKHGVIHRDVKPSNILLDE-RGNIKLCDFGISGR 241 (391)
T ss_pred HHhcceeecccCccceEEcc-CCCEEeecccccce
Confidence 45677999999999999997 47899999998874
No 419
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=94.88 E-value=0.063 Score=50.77 Aligned_cols=141 Identities=15% Similarity=0.192 Sum_probs=79.7
Q ss_pred CcEEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccChHHHHHHHHHHHhCCCCceEEEEE-CC--ee
Q 024452 36 DALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFNRDDEIRTFECMSSQGQGPRLLGRF-GD--GR 109 (267)
Q Consensus 36 ~~~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr~~E~~~~~~l~~~gl~P~v~~~~-~~--~~ 109 (267)
+..--.+|..|-=.+||+-.+ .+.+.||+++-.. +.+.--++|+.+++.=+..++.= -.+.. +. .+
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~w-------hGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlL-FMG~~~~p~~AI 464 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRW-------HGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILL-FMGACMNPPLAI 464 (678)
T ss_pred Hhhccceeccccccceeeccc-------ccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhhee-eehhhcCCceee
Confidence 334456678888889999976 3688888875432 11111247777776555433210 00111 11 37
Q ss_pred EEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHH
Q 024452 110 VEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLE 189 (267)
Q Consensus 110 v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 189 (267)
|..|.+|.++-. .+|.... ..++... ++.. ..+.+-+.+|
T Consensus 465 iTqwCeGsSLY~-----------------hlHv~et----kfdm~~~----idIA--------------qQiaqGM~YL- 504 (678)
T KOG0193|consen 465 ITQWCEGSSLYT-----------------HLHVQET----KFDMNTT----IDIA--------------QQIAQGMDYL- 504 (678)
T ss_pred eehhccCchhhh-----------------hccchhh----hhhHHHH----HHHH--------------HHHHHhhhhh-
Confidence 899999977642 1222211 1111111 1110 1122222333
Q ss_pred HhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcch
Q 024452 190 KELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM 232 (267)
Q Consensus 190 ~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~ 232 (267)
+...++|.||+..||+++++ ..|+|=||..++.--
T Consensus 505 -------HAK~IIHrDLKSnNIFl~~~-~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 505 -------HAKNIIHRDLKSNNIFLHED-LKVKIGDFGLATVKT 539 (678)
T ss_pred -------hhhhhhhhhccccceEEccC-CcEEEecccceeeee
Confidence 22348999999999999974 789999999987643
No 420
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=94.73 E-value=0.023 Score=48.73 Aligned_cols=31 Identities=19% Similarity=0.251 Sum_probs=27.5
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.-.+|+|++|.|||++. .|.+.|-||.-|+.
T Consensus 187 lkiIHRDvKPSNILldr-~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 187 LKIIHRDVKPSNILLDR-HGDVKLCDFGICGQ 217 (361)
T ss_pred hhhhhccCChhheEEec-CCCEeeecccchHh
Confidence 44899999999999997 47899999999986
No 421
>PRK10345 hypothetical protein; Provisional
Probab=94.46 E-value=0.033 Score=46.37 Aligned_cols=61 Identities=18% Similarity=0.197 Sum_probs=36.1
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcc-cccChHHHHHHHHHHHhCCC----CceEEEEEC
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVE-VFFNRDDEIRTFECMSSQGQ----GPRLLGRFG 106 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~-~~~dr~~E~~~~~~l~~~gl----~P~v~~~~~ 106 (267)
...+|..|....+|. .+. +... ++|+...... ..-+..+|+.+++.+...+. -+++++...
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~----~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~e 71 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPE----DAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVE 71 (210)
T ss_pred CcceecCCCceEEEE--CCC----CcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEE
Confidence 346788888889995 322 2334 5776543311 11122589999999976442 366776653
No 422
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=94.43 E-value=0.016 Score=49.63 Aligned_cols=29 Identities=21% Similarity=0.241 Sum_probs=25.1
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.|+||..+.
T Consensus 144 gi~H~dlkp~Nil~~~~-~~~kl~Dfg~~~ 172 (283)
T cd05091 144 HVVHKDLATRNVLVFDK-LNVKISDLGLFR 172 (283)
T ss_pred CccccccchhheEecCC-CceEeccccccc
Confidence 58999999999999874 679999999654
No 423
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=94.35 E-value=0.043 Score=51.88 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=28.6
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..+-++|+|++++||+++++.|.|.|=|...|+
T Consensus 162 ~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAt 194 (632)
T KOG0584|consen 162 QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLAT 194 (632)
T ss_pred CCCCccccccccceEEEcCCcCceeecchhHHH
Confidence 345689999999999999888899999998775
No 424
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.34 E-value=0.42 Score=45.24 Aligned_cols=137 Identities=18% Similarity=0.169 Sum_probs=77.5
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCc---ccccCh-HHHHHHHHHHHhCCCCceEEEEECCe----eEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGV---EVFFNR-DDEIRTFECMSSQGQGPRLLGRFGDG----RVE 111 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~---~~~~dr-~~E~~~~~~l~~~gl~P~v~~~~~~~----~v~ 111 (267)
-..|..|.-..+|.++... .+..|.+|+-.+.. ...-++ .+|+++.+.|+...+ -+.+.++++. ++.
T Consensus 23 g~~LGkGgFA~cYe~~~~~----tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnI-V~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLD----TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNI-VQFYHFFEDSNNVYIVL 97 (592)
T ss_pred eeeeccCcceEEEEEEEcC----CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcE-EeeeeEeecCCceEEEE
Confidence 3445677779999998532 35778888754321 011111 479999988877432 2345566654 555
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
|..+-+ .+ .+||+...+.. ++. .+.|+.|+ ..-+.+|
T Consensus 98 ELC~~~--------------sL----~el~Krrk~lt-EpE----ary~l~QI-----------------v~GlkYL--- 134 (592)
T KOG0575|consen 98 ELCHRG--------------SL----MELLKRRKPLT-EPE----ARYFLRQI-----------------VEGLKYL--- 134 (592)
T ss_pred EecCCc--------------cH----HHHHHhcCCCC-cHH----HHHHHHHH-----------------HHHHHHH---
Confidence 555421 22 23333222111 111 22233322 1112222
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
+..+++|+|++.||++++++ -.|.|=||..|+.
T Consensus 135 -----H~~~IiHRDLKLGNlfL~~~-~~VKIgDFGLAt~ 167 (592)
T KOG0575|consen 135 -----HSLGIIHRDLKLGNLFLNEN-MNVKIGDFGLATQ 167 (592)
T ss_pred -----HhcCceecccchhheeecCc-CcEEecccceeee
Confidence 33459999999999999974 5799999998875
No 425
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=94.27 E-value=0.27 Score=46.19 Aligned_cols=143 Identities=15% Similarity=0.114 Sum_probs=77.6
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCC---cccccChHHHHHHHHHHHhCCCCceEEEEE-CCe--eEEEeecC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEG---VEVFFNRDDEIRTFECMSSQGQGPRLLGRF-GDG--RVEEFIHA 116 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~---~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~-~~~--~v~e~i~G 116 (267)
+..|.-..||--.... .++.+.+|+-.+- ++..-.-++|+++++.+..-|++---..+. ++. .|||-+.|
T Consensus 572 LGSGQFG~VYgg~hRk----tGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 572 LGSGQFGTVYGGKHRK----TGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred ccCCcceeeecceecc----cCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 4566667777765443 3567777765432 111112258999998887766543222211 222 67888888
Q ss_pred CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCC
Q 024452 117 RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDH 196 (267)
Q Consensus 117 ~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 196 (267)
..+.- + | +.... .+-+++-+|+- ..+...++.|
T Consensus 648 DMLEM-----------I---L------SsEkg---RL~er~TkFlv----------------tQIL~ALr~L-------- 680 (888)
T KOG4236|consen 648 DMLEM-----------I---L------SSEKG---RLPERITKFLV----------------TQILVALRYL-------- 680 (888)
T ss_pred hHHHH-----------H---H------Hhhcc---cchHHHHHHHH----------------HHHHHHHHHh--------
Confidence 65531 0 0 00001 11123333321 1111222222
Q ss_pred CcEEEEccCCCCCCeeeeCCC--CCEEEEeecccCc-chHhHH
Q 024452 197 QEIGFCHNDLQYGNIMIDEET--SSITIIVSFTFLQ-NMLNFK 236 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~--~~v~lIDwE~a~~-~~~~fD 236 (267)
+-..++|+|++|.|||..... .++.|-||.||.+ |--.|-
T Consensus 681 H~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR 723 (888)
T KOG4236|consen 681 HFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR 723 (888)
T ss_pred hhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh
Confidence 234589999999999997532 3689999999985 555554
No 426
>PHA03210 serine/threonine kinase US3; Provisional
Probab=94.26 E-value=0.023 Score=53.65 Aligned_cols=29 Identities=21% Similarity=0.269 Sum_probs=25.6
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.|||++.+ +.+.|+||..|.
T Consensus 287 gIiHrDLKP~NILl~~~-~~vkL~DFGla~ 315 (501)
T PHA03210 287 KLIHRDIKLENIFLNCD-GKIVLGDFGTAM 315 (501)
T ss_pred CeecCCCCHHHEEECCC-CCEEEEeCCCce
Confidence 59999999999999874 689999998874
No 427
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=94.19 E-value=0.022 Score=49.02 Aligned_cols=31 Identities=29% Similarity=0.269 Sum_probs=26.9
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++|+|++|.|||.+++ ..+.|-||.||..
T Consensus 142 ~~IVHRDLKpENILlddn-~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 142 RNIVHRDLKPENILLDDN-MNIKISDFGFACQ 172 (411)
T ss_pred hhhhhcccChhheeeccc-cceEEeccceeec
Confidence 348999999999999974 7899999999864
No 428
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=94.15 E-value=0.039 Score=46.79 Aligned_cols=32 Identities=16% Similarity=0.246 Sum_probs=27.5
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccCcch
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM 232 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~ 232 (267)
-+.|+|++|+||+..+ .+..+++||.-+...+
T Consensus 149 ~yAH~DiKP~NILls~-~~~~vl~D~GS~~~a~ 180 (302)
T KOG2345|consen 149 PYAHRDIKPANILLSD-SGLPVLMDLGSATQAP 180 (302)
T ss_pred cccccCCCcceeEecC-CCceEEEeccCccccc
Confidence 5899999999999987 4789999999886543
No 429
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=93.95 E-value=0.052 Score=48.98 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=30.1
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
-...+++|+|++|+|++++...+.-.||||..|..
T Consensus 148 ~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 148 LHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred hhccCccccCCCccccccccccCCceEEechhHHH
Confidence 35678999999999999998666789999999873
No 430
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.88 E-value=0.037 Score=55.58 Aligned_cols=32 Identities=16% Similarity=0.331 Sum_probs=25.4
Q ss_pred CcEEEEccCCCCCCeeeeC------CCCCEEEEeeccc
Q 024452 197 QEIGFCHNDLQYGNIMIDE------ETSSITIIVSFTF 228 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~------~~~~v~lIDwE~a 228 (267)
+...+||||++|+|+|+.. +...+.||||.++
T Consensus 811 H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s 848 (974)
T KOG1166|consen 811 HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS 848 (974)
T ss_pred HhcceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence 4456999999999999864 1235889999977
No 431
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=93.85 E-value=0.42 Score=42.48 Aligned_cols=32 Identities=22% Similarity=0.153 Sum_probs=25.6
Q ss_pred cEEEEccCCCCCCeeeeCC----CCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEE----TSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~----~~~v~lIDwE~a~ 229 (267)
..-|+-+|++|+|+|+... ...+.+|||..|.
T Consensus 142 ~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 142 EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 3458999999999999642 2457899999885
No 432
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.82 E-value=0.12 Score=47.20 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=29.7
Q ss_pred CCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
....++.+.|+|++..||||..+ +.-.|=|...|-.
T Consensus 330 GTqgKPaIAHRDlKSKNILVKkn-~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 330 GTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVR 365 (513)
T ss_pred cCCCCchhhccccccccEEEccC-CcEEEeeceeeEE
Confidence 34678899999999999999874 6678889888754
No 433
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=93.60 E-value=0.035 Score=56.34 Aligned_cols=33 Identities=27% Similarity=0.297 Sum_probs=29.0
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
+..+++|+|++|.||+++++ +.|.|.||..|..
T Consensus 714 H~~giIHRDLKP~NIFLd~~-~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFLDSR-NSVKIGDFGLATD 746 (1351)
T ss_pred HhCceeeccCCcceeEEcCC-CCeeecccccchh
Confidence 45669999999999999974 6899999999975
No 434
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=93.53 E-value=0.033 Score=48.99 Aligned_cols=30 Identities=20% Similarity=0.212 Sum_probs=26.3
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
.++|+|++|+||+++++ +.+.|+||..+..
T Consensus 123 gi~H~dlkp~nili~~~-~~~~L~dfg~~~~ 152 (330)
T cd07834 123 NVIHRDLKPSNILVNSN-CDLKICDFGLARG 152 (330)
T ss_pred CeecCCCCHHHEEEcCC-CCEEEcccCceEe
Confidence 48999999999999974 7899999987764
No 435
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=93.11 E-value=0.046 Score=48.44 Aligned_cols=35 Identities=14% Similarity=0.133 Sum_probs=29.9
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQN 231 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~ 231 (267)
-+....+|+|++|+|++++.+ -.+.+-||..|..-
T Consensus 141 iHSAnViHRDLKPsNll~n~~-c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 141 IHSANVIHRDLKPSNLLLNAD-CDLKICDFGLARYL 175 (359)
T ss_pred hhcccccccccchhheeeccC-CCEEeccccceeec
Confidence 355679999999999999974 67899999999864
No 436
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=93.05 E-value=0.037 Score=46.35 Aligned_cols=28 Identities=25% Similarity=0.449 Sum_probs=24.6
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
.++|+|++|.||+++.+ +.+.++||..+
T Consensus 105 ~i~H~dlkp~Nil~~~~-~~~~l~df~~~ 132 (237)
T cd05576 105 GIVCRDLNPNNILLDDR-GHIQLTYFSRW 132 (237)
T ss_pred CeeccCCCHHHEEEcCC-CCEEEecccch
Confidence 59999999999999974 67999999854
No 437
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=92.69 E-value=0.066 Score=49.98 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=27.5
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
...++|.|++|+||||++....+.|.||.-|+.
T Consensus 554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 554 KCGVLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred hcCeeecccCccceEeccCcceeeeccCccccc
Confidence 456999999999999997544578999998874
No 438
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=92.45 E-value=0.083 Score=44.84 Aligned_cols=29 Identities=24% Similarity=0.258 Sum_probs=25.2
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||+++++ +.+.++||..+.
T Consensus 133 ~i~H~dikp~nili~~~-~~~kl~dfg~~~ 161 (273)
T cd05074 133 NFIHRDLAARNCMLNEN-MTVCVADFGLSK 161 (273)
T ss_pred CEeecccchhhEEEcCC-CCEEECcccccc
Confidence 49999999999999864 678999998765
No 439
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=92.36 E-value=0.048 Score=51.68 Aligned_cols=43 Identities=16% Similarity=0.049 Sum_probs=32.3
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhh
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKI 242 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~ 242 (267)
...+|+|++.||||+.+. +.|.+-||.-|++-.++--...+-|
T Consensus 145 ~~~IHRDiKAGNILLse~-g~VKLaDFGSAsi~~PAnsFvGTPy 187 (948)
T KOG0577|consen 145 HNRIHRDIKAGNILLSEP-GLVKLADFGSASIMAPANSFVGTPY 187 (948)
T ss_pred hhHHhhhccccceEecCC-CeeeeccccchhhcCchhcccCCcc
Confidence 458999999999999974 7899999999886544443333333
No 440
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=92.18 E-value=0.09 Score=45.07 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=77.7
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCC-cccccCh--HHHHHHHHHHHhCCCCceEEEEEC--Ce--eEE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEG-VEVFFNR--DDEIRTFECMSSQGQGPRLLGRFG--DG--RVE 111 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~-~~~~~dr--~~E~~~~~~l~~~gl~P~v~~~~~--~~--~v~ 111 (267)
+.+.+.+|.-..||+..-.. .++.+.+|.-.-+ .+.-+++ -+|+..++.+.... .-+++..++ ++ +|+
T Consensus 6 ~~~~lGEG~~gvVyka~d~~----t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~n-Ii~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTE----TGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPN-IIELIDVFPHKSNLSLVF 80 (318)
T ss_pred hhhhhcCcceEEEEEEEecC----CCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcc-hhhhhhhccCCCceEEEE
Confidence 45567899999999987443 3466666533222 2223333 58999888887432 223333443 22 889
Q ss_pred EeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHh
Q 024452 112 EFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKE 191 (267)
Q Consensus 112 e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 191 (267)
||++-. +. .+++ . ...+-.-..+..|+-... +-+..+
T Consensus 81 Efm~td-Le-------~vIk----------d-----~~i~l~pa~iK~y~~m~L-----------------kGl~y~--- 117 (318)
T KOG0659|consen 81 EFMPTD-LE-------VVIK----------D-----KNIILSPADIKSYMLMTL-----------------KGLAYC--- 117 (318)
T ss_pred Eecccc-HH-------HHhc----------c-----cccccCHHHHHHHHHHHH-----------------HHHHHH---
Confidence 998731 10 0111 0 000001123444443211 111222
Q ss_pred CCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 192 LPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 192 l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
+..-+.|+|++|.|+|++++ +.+.+=||..|..
T Consensus 118 -----H~~~IlHRDlKPnNLLis~~-g~lKiADFGLAr~ 150 (318)
T KOG0659|consen 118 -----HSKWILHRDLKPNNLLISSD-GQLKIADFGLARF 150 (318)
T ss_pred -----HhhhhhcccCCccceEEcCC-CcEEeecccchhc
Confidence 22337899999999999984 7899999998864
No 441
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=91.88 E-value=0.11 Score=49.01 Aligned_cols=28 Identities=21% Similarity=0.376 Sum_probs=24.9
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
.++|+|++|.|||++.+ +.+.|+||..+
T Consensus 329 ~ivHrDLKp~NILl~~~-~~~kL~DFGla 356 (507)
T PLN03224 329 GIVHRDIKPENLLVTVD-GQVKIIDFGAA 356 (507)
T ss_pred CeecCCCchHhEEECCC-CcEEEEeCcCc
Confidence 58999999999999874 67999999876
No 442
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=91.61 E-value=0.071 Score=47.40 Aligned_cols=29 Identities=28% Similarity=0.342 Sum_probs=25.6
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.++|+|++|.||++++ ++.+.|+||..+.
T Consensus 138 gi~H~dlkp~Nill~~-~~~~kL~dfg~~~ 166 (343)
T cd07851 138 GIIHRDLKPSNIAVNE-DCELKILDFGLAR 166 (343)
T ss_pred CeecCCCCHHHeEECC-CCCEEEccccccc
Confidence 4899999999999987 4789999998775
No 443
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=91.55 E-value=0.14 Score=45.30 Aligned_cols=136 Identities=15% Similarity=0.190 Sum_probs=78.4
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc-ccChHHHHHHHHHHHhCCCCceEEEEEC------C--e-
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV-FFNRDDEIRTFECMSSQGQGPRLLGRFG------D--G- 108 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~-~~dr~~E~~~~~~l~~~gl~P~v~~~~~------~--~- 108 (267)
....+..|-...||..+... .+..+-+|........ .-.-++|+.++..+. .|.++.... + -
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~----~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~----~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKK----TGELMAVKSVELEDSPTSESLEREIRILSRLN----HPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred hhccccCccceEEEEEEecC----CCcceeeeeeecccchhHHHHHHHHHHHHhCC----CCCEEeeCCccccccCeeeE
Confidence 44566788889999998643 2356666654332111 111257888888777 355544322 1 1
Q ss_pred eEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHH
Q 024452 109 RVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISML 188 (267)
Q Consensus 109 ~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 188 (267)
+++||++|..+.. .+.+.-. .. + ...+..|..++ .+-+.+|
T Consensus 93 i~mEy~~~GsL~~--------------~~~~~g~-~l-----~--E~~v~~ytr~i-----------------L~GL~yl 133 (313)
T KOG0198|consen 93 IFMEYAPGGSLSD--------------LIKRYGG-KL-----P--EPLVRRYTRQI-----------------LEGLAYL 133 (313)
T ss_pred eeeeccCCCcHHH--------------HHHHcCC-CC-----C--HHHHHHHHHHH-----------------HHHHHHH
Confidence 6789999876643 1111111 01 1 12233443322 1112222
Q ss_pred HHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 189 EKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 189 ~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+...++|+|+++.|||+++.++.+.|-||..+.
T Consensus 134 --------Hs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~ 166 (313)
T KOG0198|consen 134 --------HSKGIVHCDIKPANILLDPSNGDVKLADFGLAK 166 (313)
T ss_pred --------HhCCEeccCcccceEEEeCCCCeEEeccCcccc
Confidence 245699999999999999733679999999665
No 444
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=91.29 E-value=0.098 Score=52.93 Aligned_cols=32 Identities=22% Similarity=0.486 Sum_probs=27.8
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+..+++|+|++|+|||++-. |-+.|=||..|.
T Consensus 192 H~mgyVHRDiKPDNvLld~~-GHikLADFGsCl 223 (1317)
T KOG0612|consen 192 HSMGYVHRDIKPDNVLLDKS-GHIKLADFGSCL 223 (1317)
T ss_pred HhccceeccCCcceeEeccc-CcEeeccchhHH
Confidence 45679999999999999975 679999999884
No 445
>PLN00181 protein SPA1-RELATED; Provisional
Probab=91.29 E-value=0.18 Score=50.34 Aligned_cols=31 Identities=10% Similarity=0.162 Sum_probs=24.2
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||++.. +.+.++||..|.
T Consensus 98 ~~gIvHrDlKP~NiLl~~~-~~~k~~d~~~~~ 128 (793)
T PLN00181 98 SQGIVVHNVRPSCFVMSSF-NHVSFIESASCS 128 (793)
T ss_pred hCCeeeccCCchhEEEccc-CcEEEeeccccC
Confidence 4569999999999999763 567777776553
No 446
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.15 E-value=0.68 Score=41.36 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHhCCC-CceEEEEECCeeEEEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHH
Q 024452 83 DDEIRTFECMSSQGQ-GPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWV 161 (267)
Q Consensus 83 ~~E~~~~~~l~~~gl-~P~v~~~~~~~~v~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~ 161 (267)
++|..-+..+.++|+ +|.|+-.-..-+||.||-...+....+.+-. .+- +.++.-+
T Consensus 333 EkEmhNL~RMq~~GlpcP~vV~lkkhvLVMsFiGd~~~aAPkLK~v~----------------------l~d-~E~~~aY 389 (531)
T KOG2269|consen 333 EKEMHNLSRMQKHGLPCPQVVKLKKHVLVMSFIGDQGLAAPKLKNVE----------------------LTD-DERRNAY 389 (531)
T ss_pred HHHHHHHHHHHhcCCCCCceeeeecceEEEEeecCCCCCCccccccc----------------------cCh-HHHHHHH
Confidence 456667778888997 6999988877799999965544443333210 000 0011111
Q ss_pred HHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc--chHhHH
Q 024452 162 SVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ--NMLNFK 236 (267)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~--~~~~fD 236 (267)
......+.+|.+ ...|+|.|+.--|+|+.+ +++++||---+.- +|++..
T Consensus 390 -----------------~q~~~~M~~lY~-------Ec~LVHADlSEyN~Lw~~--gKvw~IDVsQsvep~HP~~Le 440 (531)
T KOG2269|consen 390 -----------------DQVQSIMCRLYK-------ECLLVHADLSEYNLLWTP--GKVWVIDVSQSVEPSHPRSLE 440 (531)
T ss_pred -----------------HHHHHHHHHHHH-------hhheeecchhhhhheecC--CceEEEechhccCCCCcchhH
Confidence 112222233332 245999999999999996 4899999765532 444443
No 447
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.01 E-value=0.13 Score=44.41 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=28.5
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcch
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM 232 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~ 232 (267)
....+.|+|++|||+||+.+ -.+.|.||..|....
T Consensus 173 HsA~ILHRDIKPGNLLVNSN-CvLKICDFGLARvee 207 (449)
T KOG0664|consen 173 HTANILHRDIKPGNLLVNSN-CILKICDFGLARTWD 207 (449)
T ss_pred hhcchhhccCCCccEEeccC-ceEEecccccccccc
Confidence 34568999999999999963 467899999998643
No 448
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=90.95 E-value=0.14 Score=47.30 Aligned_cols=31 Identities=16% Similarity=0.224 Sum_probs=27.0
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
-..++|+|++|.|+|++++ +.+.|=||.-|.
T Consensus 228 ~QgiiHRDIKPsNLLl~~~-g~VKIsDFGVs~ 258 (576)
T KOG0585|consen 228 YQGIIHRDIKPSNLLLSSD-GTVKISDFGVSN 258 (576)
T ss_pred hcCeeccccchhheEEcCC-CcEEeeccceee
Confidence 3569999999999999985 789999998765
No 449
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=90.43 E-value=0.21 Score=45.11 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=46.6
Q ss_pred CCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcch----HhHH-----------------HHhhhhhhee-eeccCC
Q 024452 195 DHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM----LNFK-----------------RACTKILLIL-TFSVNS 252 (267)
Q Consensus 195 ~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~----~~fD-----------------~A~~~~~~~~-~~~~~~ 252 (267)
....+-|-|+|++-+|||++ .|.|.||||-.|...+ ..|+ +--.+-.|.+ -.+.+.
T Consensus 337 lekkf~fehrnlt~~niLId--~GnvtLIDfklsRl~~~q~~isy~rldhp~lF~G~dd~QFeIYrlMr~l~~g~wa~F~ 414 (488)
T COG5072 337 LEKKFPFEHRNLTLDNILID--EGNVTLIDFKLSRLSYSQGIISYNRLDHPDLFNGVDDYQFEIYRLMRRLLKGRWAQFE 414 (488)
T ss_pred hhhcCCcccccccccceeee--cCceEEEEeeeeecccCCceeeccccCchhhhcCccceeeeHHHHHHHHhcCcHHhcc
Confidence 35667799999999999999 3789999999887532 1121 1111111222 234778
Q ss_pred chhHhHHHHHHhhc
Q 024452 253 PMVCMRWLRILCLQ 266 (267)
Q Consensus 253 ~~~~~~~~~~~~~~ 266 (267)
++.-+.||+-|.-|
T Consensus 415 P~TNvlWL~yLs~~ 428 (488)
T COG5072 415 PITNVLWLYYLSHQ 428 (488)
T ss_pred cchhhHHHHHHHHH
Confidence 88888898877654
No 450
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=90.23 E-value=0.13 Score=45.11 Aligned_cols=37 Identities=19% Similarity=0.289 Sum_probs=30.2
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHh
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLN 234 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~ 234 (267)
...+++|+||+|.||++..+ ..+.|.||.+|.-....
T Consensus 135 hs~~IihRdLkPsnivv~~~-~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 135 HSAGIIHRDLKPSNIVVNSD-CTLKILDFGLARTEDTD 171 (369)
T ss_pred HhcceeecccCcccceecch-hheeeccchhhcccCcc
Confidence 55779999999999999864 67899999999754433
No 451
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=89.73 E-value=1.7 Score=42.48 Aligned_cols=137 Identities=14% Similarity=0.072 Sum_probs=73.5
Q ss_pred ecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccC-hHHHHHHHHHHHhCCCCceEEE-EECCe---eEEEeecCC
Q 024452 43 LKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFN-RDDEIRTFECMSSQGQGPRLLG-RFGDG---RVEEFIHAR 117 (267)
Q Consensus 43 l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~d-r~~E~~~~~~l~~~gl~P~v~~-~~~~~---~v~e~i~G~ 117 (267)
+..|....||...-.. .+.+..+|--....+.... ...|++..+.|...+++- -++ ..++| +.||-+||.
T Consensus 583 LGKGTYG~VYA~RD~~----tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVr-YLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 583 LGKGTYGTVYAARDMD----TQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVR-YLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred eecCceeEEEeecccc----ceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHH-HhhccCCCCeEEEEeecCCCC
Confidence 4566677777765322 2445555533221122222 246788888887765432 222 34566 568888887
Q ss_pred CCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCC
Q 024452 118 TLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQ 197 (267)
Q Consensus 118 ~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 197 (267)
.++. ..+ + ..++-.+-..++.-|-.++ .+-+.+| +
T Consensus 658 SLSs-------LLr----------s---kWGPlKDNEstm~fYtkQI-----------------LeGLkYL--------H 692 (1226)
T KOG4279|consen 658 SLSS-------LLR----------S---KWGPLKDNESTMNFYTKQI-----------------LEGLKYL--------H 692 (1226)
T ss_pred cHHH-------HHH----------h---ccCCCccchhHHHHHHHHH-----------------HHHhhhh--------h
Confidence 7652 111 0 0111001112333332222 1222233 3
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..-++|+|++-+|||++--.|.+.|-||..|.
T Consensus 693 en~IVHRDIKGDNVLvNTySGvlKISDFGTsK 724 (1226)
T KOG4279|consen 693 ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSK 724 (1226)
T ss_pred hcceeeccccCCcEEEeeccceEEecccccch
Confidence 34589999999999998655678899998763
No 452
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=89.33 E-value=1.5 Score=35.81 Aligned_cols=106 Identities=16% Similarity=0.185 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhCCCCceEEEEECCeeEEEeecC-CCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHH
Q 024452 84 DEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHA-RTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVS 162 (267)
Q Consensus 84 ~E~~~~~~l~~~gl~P~v~~~~~~~~v~e~i~G-~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~ 162 (267)
.|.-+++.+......|++++...+-.+.|+++. ...+. +. ....-.. .. |..
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~~~v~E~~~~~~~~~~-------------------~~-~l~~~~~-~~------w~~ 60 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGRFYVVEYVGAGSLYGI-------------------YR-PLSQFLQ-SP------WEQ 60 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCCEEEEEeecCcccccc-------------------cc-ccccccc-cC------HHH
Confidence 688999999888888999999877789999974 33221 00 0000000 01 211
Q ss_pred HHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchH
Q 024452 163 VAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNML 233 (267)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~ 233 (267)
.+ ++ .-.+.+.++.+.. ..... +--.|++++|+-+++ ++.+.+||-|.+..-..
T Consensus 61 R~-~i----------A~~lL~~l~~l~~----~~~~~-~~lcDv~~~nfgv~~-~~~lk~iDld~v~~~~~ 114 (188)
T PF12260_consen 61 RA-KI----------ALQLLELLEELDH----GPLGF-FYLCDVSPDNFGVND-DGRLKLIDLDDVFVEDK 114 (188)
T ss_pred HH-HH----------HHHHHHHHHHHhc----CCCCc-EEEeecchHHeEEeC-CCcEEEEechhcchhHH
Confidence 11 00 0112233333332 23334 777899999999996 46899999998876443
No 453
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=88.77 E-value=0.47 Score=43.86 Aligned_cols=32 Identities=31% Similarity=0.319 Sum_probs=27.6
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+..+|-|+|++|.|||+.. ...+.|=||..|.
T Consensus 127 Hk~GfFHRDlKPENiLi~~-~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 127 HKHGFFHRDLKPENILISG-NDVIKIADFGLAR 158 (538)
T ss_pred HhcCcccccCChhheEecc-cceeEeccccccc
Confidence 5678999999999999985 3578999999885
No 454
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=88.47 E-value=0.38 Score=43.84 Aligned_cols=43 Identities=9% Similarity=-0.056 Sum_probs=34.4
Q ss_pred CCCCcEEEEccCCCCCCeeeeC-CCCCEE--EEeecccCcchHhHH
Q 024452 194 NDHQEIGFCHNDLQYGNIMIDE-ETSSIT--IIVSFTFLQNMLNFK 236 (267)
Q Consensus 194 ~~~~~~~l~H~Dl~~~Nilv~~-~~~~v~--lIDwE~a~~~~~~fD 236 (267)
....+.++++||+|.+|+=.-. .++.+. |=|||.+.+|+..||
T Consensus 38 ~~~~~~v~icGD~Hl~NFG~~~~~~~~~vFdiNDFDEa~~gp~~wD 83 (385)
T PF10009_consen 38 PPSGPPVWICGDAHLENFGAFASPEGRVVFDINDFDEALPGPFEWD 83 (385)
T ss_pred CCCCCceEEeccchhhccCcccCCCCCEEecCCCCCcCCcCChHHH
Confidence 3577899999999999996533 234433 779999999999999
No 455
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=88.44 E-value=0.29 Score=43.42 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=27.9
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+..-++|+|+++.|+|+.. .|.+.|-||..|.
T Consensus 194 H~~wilHRDLK~SNLLm~~-~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 194 HDNWILHRDLKTSNLLLSH-KGILKIADFGLAR 225 (419)
T ss_pred hhceeEecccchhheeecc-CCcEEecccchhh
Confidence 4456899999999999987 4789999999986
No 456
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=88.41 E-value=0.28 Score=42.61 Aligned_cols=31 Identities=13% Similarity=-0.018 Sum_probs=26.9
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
-...|+|++|+||+++.+ +.+.|=||..+..
T Consensus 147 ~~VmHRDIKPaNIFl~~~-gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 147 GTVMHRDIKPANIFLTAN-GVVKLGDFGLGRF 177 (375)
T ss_pred cceeeccCcchheEEcCC-CceeeccchhHhH
Confidence 458999999999999974 7899999998863
No 457
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=88.27 E-value=2.6 Score=41.23 Aligned_cols=142 Identities=16% Similarity=0.124 Sum_probs=81.3
Q ss_pred EecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhCCCCceEEEEECCeeEEEeecCCCC
Q 024452 42 PLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTL 119 (267)
Q Consensus 42 ~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~gl~P~v~~~~~~~~v~e~i~G~~l 119 (267)
.|..|.-..|++-.+.... +..-.+.||+.+.+... +-|-.+|+.+|..|.... .-++|+.. =+.++
T Consensus 117 ~LG~GsFgvV~rg~Wt~ps-gk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~h-liRLyGvV---------l~qp~ 185 (1039)
T KOG0199|consen 117 LLGEGSFGVVKRGTWTQPS-GKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPH-LIRLYGVV---------LDQPA 185 (1039)
T ss_pred HhcCcceeeEeeccccCCC-CcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcc-eeEEeeee---------ccchh
Confidence 3466766777777765421 23456678888776532 223347888776665421 12233321 11111
Q ss_pred CcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhCCCCCCcE
Q 024452 120 SAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKELPNDHQEI 199 (267)
Q Consensus 120 ~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~ 199 (267)
.- +. -...+|.+|.+||+...+ .-+...+-+|..++ ...+.+|+. .
T Consensus 186 mM--V~---ELaplGSLldrLrka~~~----~llv~~Lcdya~Qi-----------------A~aM~YLes--------k 231 (1039)
T KOG0199|consen 186 MM--VF---ELAPLGSLLDRLRKAKKA----ILLVSRLCDYAMQI-----------------AKAMQYLES--------K 231 (1039)
T ss_pred hH--Hh---hhcccchHHHHHhhcccc----ceeHHHHHHHHHHH-----------------HHHHHHHhh--------h
Confidence 10 00 134578889999983321 12334455554432 334445543 3
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.|+|+|+-..|+++-. .+.|.|-||....
T Consensus 232 rlvHRDLAARNlllas-prtVKI~DFGLmR 260 (1039)
T KOG0199|consen 232 RLVHRDLAARNLLLAS-PRTVKICDFGLMR 260 (1039)
T ss_pred hhhhhhhhhhhheecc-cceeeeeccccee
Confidence 4999999999999976 3678999999775
No 458
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=88.27 E-value=1.4 Score=40.62 Aligned_cols=149 Identities=14% Similarity=0.108 Sum_probs=81.4
Q ss_pred EEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCcccccChHHHHHHHHHHHhCCCCceEEEEEC----Ce----eE
Q 024452 39 QVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFG----DG----RV 110 (267)
Q Consensus 39 ~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~~~dr~~E~~~~~~l~~~gl~P~v~~~~~----~~----~v 110 (267)
.++.+..|.-...+.+.... +...|++|.-.-.....-.|....+-+..+++ -..|-++.+-+ ++ ++
T Consensus 8 ~~~~iG~GafG~a~lvrhk~----~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~-~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 8 VLRQVGRGAFGSALLVRHKS----DDKLYVLKKINLEKLTEPERRSAIQEMDLLSK-LLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred hhhhcCccccchhhhhhhcc----CCceEEEEEEeccccCchhhHHHHHHHHHHHh-ccCCCeeeeccchhcCCceEEEE
Confidence 34556677777777776432 45788887543221110111122223334444 23477766532 22 78
Q ss_pred EEeecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHH
Q 024452 111 EEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEK 190 (267)
Q Consensus 111 ~e~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 190 (267)
++|.+|..+.. .+.+-..... ..+++-+|+-++ ...++.+-
T Consensus 83 m~Y~eGg~l~~--------------~i~~~k~~~f-------~E~~i~~~~~Q~-----------------~~av~ylH- 123 (426)
T KOG0589|consen 83 MEYCEGGDLAQ--------------LIKEQKGVLF-------PEERILKWFVQI-----------------LLAVNYLH- 123 (426)
T ss_pred EeecCCCCHHH--------------HHHHHhhccc-------cHHHHHHHHHHH-----------------HHHHHHHH-
Confidence 99999976542 1111111111 123455565432 11223332
Q ss_pred hCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHh
Q 024452 191 ELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRAC 239 (267)
Q Consensus 191 ~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~ 239 (267)
...+.|+|+++.||+.+.+ +.|.|=||+-|..-....+.|+
T Consensus 124 -------~~~iLHRDlK~~Nifltk~-~~VkLgDfGlaK~l~~~~~~a~ 164 (426)
T KOG0589|consen 124 -------ENRVLHRDLKCANIFLTKD-KKVKLGDFGLAKILNPEDSLAS 164 (426)
T ss_pred -------hhhhhcccchhhhhhcccc-CceeecchhhhhhcCCchhhhh
Confidence 3458899999999999975 5689999999987444434444
No 459
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=88.24 E-value=0.27 Score=47.23 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=28.6
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccCcchH
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNML 233 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~ 233 (267)
..++|+||+.||||+.-+ |.+.|-||.-++-+-.
T Consensus 149 ~~iIHRDLKAGNiL~Tld-GdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 149 QNIIHRDLKAGNILLTLD-GDIRLADFGVSAKNKS 182 (1187)
T ss_pred cchhhhhccccceEEEec-CcEeeecccccccchh
Confidence 458999999999999975 7899999998875543
No 460
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=88.22 E-value=0.23 Score=46.93 Aligned_cols=39 Identities=23% Similarity=0.155 Sum_probs=30.7
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc-chHhHH
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ-NMLNFK 236 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~-~~~~fD 236 (267)
+...+||+||+..|+|++.+ ..+.|-||+++.. .+-.++
T Consensus 172 H~k~ivHrdLk~eNilL~~~-mnikIaDfgfS~~~~~~~~l 211 (596)
T KOG0586|consen 172 HSKNIVHRDLKAENILLDEN-MNIKIADFGFSTFFDYGLML 211 (596)
T ss_pred hhcceeccccchhhcccccc-cceeeeccccceeecccccc
Confidence 44669999999999999974 5689999999974 444443
No 461
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=85.99 E-value=0.41 Score=40.92 Aligned_cols=29 Identities=14% Similarity=0.105 Sum_probs=22.3
Q ss_pred EEEccCCCCCCeeeeCCC------CCEEEEeeccc
Q 024452 200 GFCHNDLQYGNIMIDEET------SSITIIVSFTF 228 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~------~~v~lIDwE~a 228 (267)
.++|+|++|.||+++..+ ..+.+.||..+
T Consensus 137 ~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~ 171 (274)
T cd05076 137 NLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVS 171 (274)
T ss_pred CccCCCCCcccEEEeccCcccCccceeeecCCccc
Confidence 489999999999997521 13678898755
No 462
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=85.65 E-value=0.46 Score=41.51 Aligned_cols=30 Identities=17% Similarity=0.398 Sum_probs=20.9
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.+++|||+++.|++++++ |.+.|=||+...
T Consensus 164 ~GlVHgdi~~~nfll~~~-G~v~Lg~F~~~~ 193 (288)
T PF14531_consen 164 YGLVHGDIKPENFLLDQD-GGVFLGDFSSLV 193 (288)
T ss_dssp TTEEEST-SGGGEEE-TT-S-EEE--GGGEE
T ss_pred cceEecccceeeEEEcCC-CCEEEcChHHHe
Confidence 349999999999999985 789999987653
No 463
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=85.49 E-value=1.7 Score=35.39 Aligned_cols=30 Identities=17% Similarity=0.167 Sum_probs=25.4
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
....|+|++|.|++++.+ +.+.+-||..|.
T Consensus 120 hnvlhrdlkpqnllin~n-gelkladfglar 149 (292)
T KOG0662|consen 120 HNVLHRDLKPQNLLINRN-GELKLADFGLAR 149 (292)
T ss_pred hhhhhccCCcceEEeccC-CcEEecccchhh
Confidence 446689999999999974 789999999874
No 464
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=85.04 E-value=0.96 Score=40.74 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=27.8
Q ss_pred CcEEEEccCCCCCCeeeeCC-------------------CCCEEEEeecccCcch
Q 024452 197 QEIGFCHNDLQYGNIMIDEE-------------------TSSITIIVSFTFLQNM 232 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~-------------------~~~v~lIDwE~a~~~~ 232 (267)
....++|-||+|.||++-++ .-.+.+|||.-|.+..
T Consensus 209 h~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~ 263 (415)
T KOG0671|consen 209 HDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH 263 (415)
T ss_pred HhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceec
Confidence 56779999999999998652 1236799999887643
No 465
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=84.50 E-value=0.45 Score=44.57 Aligned_cols=32 Identities=16% Similarity=0.187 Sum_probs=27.4
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
+...++-+|++|.|+|.+. .|.+.|+||.||.
T Consensus 537 H~k~iIYRDLKPENllLd~-~Gy~KLVDFGFAK 568 (732)
T KOG0614|consen 537 HRKGIIYRDLKPENLLLDN-RGYLKLVDFGFAK 568 (732)
T ss_pred HhcCceeccCChhheeecc-CCceEEeehhhHH
Confidence 4456999999999999997 4789999998874
No 466
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=83.26 E-value=2.2 Score=41.26 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 181 LKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 181 l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
+...+++|++. -|+|+||-..|-||.++ +.|.+-||..+..
T Consensus 374 IsSaMeYLEkk--------nFIHRDLAARNCLVgEn-hiVKvADFGLsRl 414 (1157)
T KOG4278|consen 374 ISSAMEYLEKK--------NFIHRDLAARNCLVGEN-HIVKVADFGLSRL 414 (1157)
T ss_pred HHHHHHHHHHh--------hhhhhhhhhhhcccccc-ceEEeeccchhhh
Confidence 34455666643 39999999999999874 7889999998753
No 467
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=83.13 E-value=0.82 Score=40.34 Aligned_cols=147 Identities=11% Similarity=0.121 Sum_probs=77.5
Q ss_pred EEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCC---cccccChHHHHHHHHHHHhCCCC--ceEEEEECC--eeEEE
Q 024452 40 VIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEG---VEVFFNRDDEIRTFECMSSQGQG--PRLLGRFGD--GRVEE 112 (267)
Q Consensus 40 i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~---~~~~~dr~~E~~~~~~l~~~gl~--P~v~~~~~~--~~v~e 112 (267)
+..|..|....||+.-..++++.....|.+|.+... +....+.-+|...++.+..-.+. -+|+...+. +++++
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fd 108 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFD 108 (438)
T ss_pred cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEeh
Confidence 445788999999998433222100124556654322 11111224899999998876653 233332221 26777
Q ss_pred eecCCCCCcccCCChHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhhccCcccccccchhhHHHHHHHHHHhC
Q 024452 113 FIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFCLYTLKDEISMLEKEL 192 (267)
Q Consensus 113 ~i~G~~l~~~~l~~~~i~~~la~~La~lH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 192 (267)
|-|-. .+ .+-++|+.+....-.+...+.+ +..+..-+.+|-+
T Consensus 109 YAEhD-----------L~-----~II~fHr~~~~~~lp~~mvKsi--------------------lwQil~Gv~YLH~-- 150 (438)
T KOG0666|consen 109 YAEHD-----------LW-----HIIKFHRASKAKQLPRSMVKSI--------------------LWQILDGVHYLHS-- 150 (438)
T ss_pred hhhhh-----------HH-----HHHHHhccchhccCCHHHHHHH--------------------HHHHHhhhHHHhh--
Confidence 76521 11 1335677654211011111111 0112222233322
Q ss_pred CCCCCcEEEEccCCCCCCeeeeCC---CCCEEEEeecccCc
Q 024452 193 PNDHQEIGFCHNDLQYGNIMIDEE---TSSITIIVSFTFLQ 230 (267)
Q Consensus 193 ~~~~~~~~l~H~Dl~~~Nilv~~~---~~~v~lIDwE~a~~ 230 (267)
.=..|+|++|.|||+..+ .|.|.|=|+.+|..
T Consensus 151 ------NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~ 185 (438)
T KOG0666|consen 151 ------NWVLHRDLKPANILVMGDGPERGRVKIADLGLARL 185 (438)
T ss_pred ------hheeeccCCcceEEEeccCCccCeeEeecccHHHH
Confidence 237899999999999864 25789999998863
No 468
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=83.05 E-value=0.74 Score=38.93 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=24.5
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecc
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFT 227 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~ 227 (267)
....+.|||..|.|||.+.. |-+.++|--.
T Consensus 160 ~~~~~lHGD~np~NiM~D~~-G~lKlVDP~~ 189 (308)
T PF07387_consen 160 ENQHCLHGDCNPDNIMCDKF-GYLKLVDPVC 189 (308)
T ss_pred cCCCeecCCCChhheeecCC-CCEEecChhh
Confidence 45679999999999999874 6788888653
No 469
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=82.40 E-value=1.1 Score=39.51 Aligned_cols=33 Identities=18% Similarity=0.097 Sum_probs=28.4
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
-..+++.=||-|++|||++..+|.+.-|||.++
T Consensus 206 ~~~yilglgDRh~~NIli~~~tG~v~hiDf~~~ 238 (307)
T cd05170 206 MIGYVIGLGDRHLDNVLIDLKTGEVVHIDYNVC 238 (307)
T ss_pred HHHHHccCCCCCCccEEEEcCCCcEEEEeeHhh
Confidence 345778889999999999965688999999987
No 470
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the
Probab=82.34 E-value=1.2 Score=37.33 Aligned_cols=32 Identities=25% Similarity=0.095 Sum_probs=26.9
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.+++.=||=|++|||++..+|.+.-|||.++-
T Consensus 127 ~YilglgDRh~~NIli~~~~G~~~hIDfg~~~ 158 (219)
T cd00142 127 GYILGIGDRHPDNIMIDLDTGKLFHIDFGFIF 158 (219)
T ss_pred HHHhccCCCCCccEEEECCCCeEEEEeeHHhh
Confidence 35567799999999999855789999999874
No 471
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central
Probab=81.85 E-value=1.2 Score=37.78 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=27.5
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..+++-=||=|++|||++..+|.+.-|||.++-
T Consensus 137 ~~YilgigDRh~~NIli~~~tG~~~HIDfg~~~ 169 (237)
T cd00892 137 VGYILGLGDRHGENILFDSNTGDVVHVDFNCLF 169 (237)
T ss_pred HHHHhccCCCCcccEEEEcCCCcEEEEehHhhh
Confidence 446677899999999999756789999999763
No 472
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi
Probab=81.57 E-value=1.2 Score=38.75 Aligned_cols=33 Identities=24% Similarity=0.107 Sum_probs=28.4
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
-..+++.=||=|++|||++.++|.+.-|||.++
T Consensus 178 ~~~yilglgDRh~~NIll~~~tG~v~hiDf~~~ 210 (279)
T cd05171 178 IVGYILGLGDRHANNILIDEKTAEVVHIDLGIA 210 (279)
T ss_pred HHHHhhccCCCCcccEEEEcCcCcEEEEechhh
Confidence 345778889999999999965688999999987
No 473
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=81.39 E-value=1.5 Score=37.12 Aligned_cols=33 Identities=18% Similarity=0.032 Sum_probs=28.1
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
-..+++.=||=|++|||++.++|.+.-|||.++
T Consensus 133 ~~~YilglgDRH~~NIli~~~tG~v~HIDfg~~ 165 (235)
T cd05172 133 VSHWILGIGDRHLSNFLVDLETGGLVGIDFGHA 165 (235)
T ss_pred HHhheeeccCCCcccEEEECCCCcEEEEeeHhh
Confidence 345788899999999999955688999999976
No 474
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=80.84 E-value=0.93 Score=43.87 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=33.3
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHH
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFK 236 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD 236 (267)
-...++.|+|+++.|+++... +.+.++||.-+...-..|+
T Consensus 436 ~h~~GiahrdlK~enll~~~~-g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 436 LHSMGLAHRDLKLENLLVTEN-GILKIIDFGAASVFRYPWE 475 (601)
T ss_pred HHhcCceeccCccccEEEecC-CceEEeecCcceeeccCcc
Confidence 466889999999999999974 6889999998877665555
No 475
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=79.34 E-value=1 Score=41.46 Aligned_cols=29 Identities=24% Similarity=0.306 Sum_probs=20.4
Q ss_pred EEEccCCCCCCeeeeCCC---CCEEEEeeccc
Q 024452 200 GFCHNDLQYGNIMIDEET---SSITIIVSFTF 228 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~---~~v~lIDwE~a 228 (267)
-|+|+|+|||||++.... ....++|-|-+
T Consensus 365 NFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~ 396 (565)
T KOG1236|consen 365 NFVHADLHPGNVLIRFNKTEDNLRGVHKAEKA 396 (565)
T ss_pred cceecccCCCcEEEEecCCCccccccccchhh
Confidence 399999999999987531 23456665554
No 476
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with
Probab=79.33 E-value=1.5 Score=38.09 Aligned_cols=33 Identities=24% Similarity=0.050 Sum_probs=28.5
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
-..+++.=||=|++|||++..+|.+.=|||.++
T Consensus 178 v~~YilglgDRH~~NIll~~~tG~v~HIDfg~~ 210 (280)
T cd05169 178 MVGYILGLGDRHPSNIMIDRLTGKVIHIDFGDC 210 (280)
T ss_pred HHHhheeccCCCcceEEEEcCCCCEEEEecHHH
Confidence 456788899999999999986688999999966
No 477
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=79.28 E-value=1.7 Score=35.83 Aligned_cols=31 Identities=26% Similarity=0.146 Sum_probs=25.7
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.+++-=||-|++|||++. +|.+.=|||.++-
T Consensus 100 ~YilglgDRh~~NIli~~-~G~v~hIDfg~~~ 130 (202)
T smart00146 100 TYILGLGDRHNDNIMLDK-TGHLFHIDFGFIL 130 (202)
T ss_pred HHHhcCCCCCCCcEEEeC-CCCEEEEechhhh
Confidence 355667899999999995 6889999999874
No 478
>cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replicat
Probab=79.21 E-value=1.7 Score=37.23 Aligned_cols=32 Identities=13% Similarity=0.051 Sum_probs=27.3
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
...++.=||-||+|||++.++|.+.-|||.++
T Consensus 152 ~gYilglgdRh~~nili~~~tG~v~hiDf~~~ 183 (253)
T cd05163 152 MTYILSINNRNPDKIFISRDTGNVYQSDLLPS 183 (253)
T ss_pred HHHHhcCCCCCchhEEEEcCCCcEEEEeeeee
Confidence 34667789999999999987789999999965
No 479
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=79.08 E-value=1.6 Score=36.63 Aligned_cols=31 Identities=26% Similarity=0.187 Sum_probs=26.2
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
.+++.=||-|++|||++..+|.+.=|||.++
T Consensus 130 ~YvlglgDRh~~NIli~~~tG~v~hIDf~~~ 160 (222)
T cd05164 130 GYILGLGDRHLDNILIDRETGEVVHIDFGCI 160 (222)
T ss_pred HHHhccCCCCCceEEEECCCCcEEEEccHHh
Confidence 3557779999999999985678888999987
No 480
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=78.80 E-value=1.2 Score=37.65 Aligned_cols=29 Identities=21% Similarity=0.273 Sum_probs=25.1
Q ss_pred EEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 201 FCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 201 l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
++|+|++|.|++++..+..+.++||..+.
T Consensus 122 ~~hrd~kp~nil~~~~~~~~~l~dfg~~~ 150 (384)
T COG0515 122 IIHRDIKPENILLDRDGRVVKLIDFGLAK 150 (384)
T ss_pred eeccCCCHHHeeecCCCCeEEEeccCcce
Confidence 99999999999999742258999999886
No 481
>TIGR02569 TIGR02569_actnb conserved hypothetical protein TIGR02569, Actinobacterial. This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown.
Probab=78.54 E-value=3.2 Score=35.56 Aligned_cols=50 Identities=10% Similarity=0.080 Sum_probs=35.4
Q ss_pred HHHHHHHHhCCCCCCcEEEEccCCCCCCeeeeCCCCCEEEEeec-ccCcchHhHH
Q 024452 183 DEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSF-TFLQNMLNFK 236 (267)
Q Consensus 183 ~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE-~a~~~~~~fD 236 (267)
..+..|.+.......+..++|+|+. ||+||.++ .-..|||+- |. -|.+|-
T Consensus 158 ~l~~~l~~lrrpv~~p~QlvHgDl~-gt~lF~g~-~~P~itDi~pyw--RP~~wa 208 (272)
T TIGR02569 158 DLINQIAGLLKPIKSPNQVVHADMY-ATTLYAGT-QPPGVTDLVPVW--RPAGWT 208 (272)
T ss_pred HHHHHHHHHhcccCCCcceeeeecc-cceeecCC-CCCceeeccccc--Ccchhh
Confidence 3445555555455788999999996 78999864 567999998 44 455555
No 482
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=78.36 E-value=2.3 Score=39.40 Aligned_cols=35 Identities=23% Similarity=0.125 Sum_probs=26.8
Q ss_pred CCcEEEEccCCCCCCeeeeCC--CCCEEEEeecccCc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEE--TSSITIIVSFTFLQ 230 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~--~~~v~lIDwE~a~~ 230 (267)
...+-++|-||+|+|||+-+. -|.+.|-||..+.+
T Consensus 586 EikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 586 EIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred ccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 344558999999999998641 25688999998864
No 483
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=78.29 E-value=1.9 Score=37.50 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=26.6
Q ss_pred CCcEEEEccCCCCCCeeeeC-CCCCEEEEeecccC
Q 024452 196 HQEIGFCHNDLQYGNIMIDE-ETSSITIIVSFTFL 229 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~-~~~~v~lIDwE~a~ 229 (267)
.+..-++|+|++..|||+-. +..++.+-||.-..
T Consensus 137 MHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 137 MHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred hhccchhhcccccceEEEecCCccEEEeeeccccc
Confidence 45567999999999999843 33478999998654
No 484
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=78.10 E-value=1.5 Score=41.41 Aligned_cols=31 Identities=16% Similarity=0.082 Sum_probs=26.3
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.-.+|+|++|.||.|=+..|-|.|-||.|+-
T Consensus 137 LHVVHRDLKPENVVFFEKlGlVKLTDFGFSN 167 (864)
T KOG4717|consen 137 LHVVHRDLKPENVVFFEKLGLVKLTDFGFSN 167 (864)
T ss_pred hhhhcccCCcceeEEeeecCceEeeeccccc
Confidence 4489999999999987656778999999874
No 485
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=77.92 E-value=1.1 Score=38.55 Aligned_cols=30 Identities=13% Similarity=0.182 Sum_probs=26.1
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeeccc
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTF 228 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a 228 (267)
+.-.+|+|.++.|+|++.+ +.+.|-||..+
T Consensus 142 r~kilHRDmKaaNvLIt~d-gilklADFGla 171 (376)
T KOG0669|consen 142 RNKILHRDMKAANVLITKD-GILKLADFGLA 171 (376)
T ss_pred HhhHHhhcccHhhEEEcCC-ceEEeeccccc
Confidence 4458999999999999974 67899999988
No 486
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=77.01 E-value=0.71 Score=40.49 Aligned_cols=29 Identities=21% Similarity=0.214 Sum_probs=24.2
Q ss_pred EEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 201 FCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 201 l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
=+|+|++.||||++-+ |...+-||.-|+.
T Consensus 150 KIHRDIKAGNILLNT~-G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 150 KIHRDIKAGNILLNTD-GIAKLADFGVAGQ 178 (502)
T ss_pred HHHhhcccccEEEccc-chhhhhhccccch
Confidence 4799999999999864 5678999998763
No 487
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=75.28 E-value=1.4 Score=40.22 Aligned_cols=32 Identities=25% Similarity=0.274 Sum_probs=27.4
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.....+|+|++..|||+|++ ..+.|-||..+-
T Consensus 170 HknrVvHRDLKLENILLD~N-~NiKIADFGLSN 201 (668)
T KOG0611|consen 170 HKNRVVHRDLKLENILLDQN-NNIKIADFGLSN 201 (668)
T ss_pred hhccceecccchhheeecCC-CCeeeeccchhh
Confidence 45668999999999999974 689999998764
No 488
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=73.19 E-value=3.8 Score=33.77 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=19.9
Q ss_pred EEEccCCCCCCeeeeCCC--C-CEEEEee
Q 024452 200 GFCHNDLQYGNIMIDEET--S-SITIIVS 225 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~--~-~v~lIDw 225 (267)
.++.+|++|+||++...+ . .+++||.
T Consensus 138 ~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG 166 (199)
T PF10707_consen 138 HIVIRDLNPHNIVVQRRDSGEFRLVLIDG 166 (199)
T ss_pred CCeecCCCcccEEEEecCCCceEEEEEeC
Confidence 367779999999997642 2 4789986
No 489
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=73.06 E-value=2 Score=42.50 Aligned_cols=32 Identities=22% Similarity=0.096 Sum_probs=25.7
Q ss_pred cEEEEccCCCCCCeeeeCC---C-CCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEE---T-SSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~---~-~~v~lIDwE~a~ 229 (267)
...++|+|++|.|||+.-. + ..+.|=||+.|.
T Consensus 624 sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 624 SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred hcccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 3789999999999999852 2 246799999885
No 490
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=72.69 E-value=1.6 Score=41.58 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=26.9
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
.....|+|++|.|||+.. ++.+.+-||.+|.
T Consensus 118 s~rilhrd~kPqniLl~~-~~~~KlcdFg~Ar 148 (808)
T KOG0597|consen 118 SNRILHRDMKPQNILLEK-GGTLKLCDFGLAR 148 (808)
T ss_pred hcCcccccCCcceeeecC-CCceeechhhhhh
Confidence 456899999999999987 5789999999875
No 491
>PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) [] is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The three products of PI3-kinase - PI-3-P, PI-3,4-P(2) and PI-3,4,5-P(3) function as secondary messengers in cell signalling. Phosphatidylinositol 4-kinase (PI4-kinase) (2.7.1.67 from EC) [] is an enzyme that acts on phosphatidylinositol (PI) in the first committed step in the production of the secondary messenger inositol-1'4'5'-trisphosphate. This domain is also present in a wide range of protein kinases, involved in diverse cellular functions, such as control of cell growth, regulation of cell cycle progression, a DNA damage checkpoint, recombination, and maintenance of telomere length. Despite significant homology to lipid kinases, no lipid kinase activity has been demonstrated for any of the PIK-related kinases []. The PI3- and PI4-kinases share a well conserved domain at their C-terminal section; this domain seems to be distantly related to the catalytic domain of protein kinases [, ]. The catalytic domain of PI3K has the typical bilobal structure that is seen in other ATP-dependent kinases, with a small N-terminal lobe and a large C-terminal lobe. The core of this domain is the most conserved region of the PI3Ks. The ATP cofactor binds in the crevice formed by the N-and C-terminal lobes, a loop between two strands provides a hydrophobic pocket for binding of the adenine moiety, and a lysine residue interacts with the alpha-phosphate. In contrast to protein kinases, the PI3K loop which interacts with the phosphates of the ATP and is known as the glycine-rich or P-loop, contains no glycine residues. Instead, contact with the ATP -phosphate is maintained through the side chain of a conserved serine residue.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 2WXL_A 4AJW_B 2WXQ_A 2WXP_A 2WXM_A 2WXH_A 2WXK_A 2WXG_A 2X38_A 2WXF_A ....
Probab=71.06 E-value=2.5 Score=35.48 Aligned_cols=33 Identities=24% Similarity=0.213 Sum_probs=20.8
Q ss_pred cEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 198 EIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 198 ~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
..++-=||=|++|||++..++.+.-|||.++-.
T Consensus 133 ~yilg~gDRh~~Nili~~~~g~~~hIDfg~~f~ 165 (235)
T PF00454_consen 133 DYILGLGDRHPGNILIDKKTGELIHIDFGFIFG 165 (235)
T ss_dssp HHHHT-CS--TTTEEE-ETTSEEEE--HSSCTT
T ss_pred eEEEeecCCCchhheeccccceeeeEEeHHhhh
Confidence 345566899999999954467899999998854
No 492
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=70.95 E-value=9.9 Score=32.26 Aligned_cols=80 Identities=13% Similarity=0.109 Sum_probs=43.3
Q ss_pred ceEEEEEcCCCccccc-ChHHHHHHHHHHHhCCCCceEEEEEC-C---eeEEEeecCCCCCc------ccCCC---hHHH
Q 024452 65 RNVLVRIYGEGVEVFF-NRDDEIRTFECMSSQGQGPRLLGRFG-D---GRVEEFIHARTLSA------ADIRD---PKIS 130 (267)
Q Consensus 65 ~~~vlRi~~~~~~~~~-dr~~E~~~~~~l~~~gl~P~v~~~~~-~---~~v~e~i~G~~l~~------~~l~~---~~i~ 130 (267)
..+++|+......... ....|+.+++.+..-++ +++++... + .+|+||++|.++.. ..+.. -.++
T Consensus 45 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~ni-v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~ 123 (274)
T cd05076 45 LRVVLKVLDPSHRDIALAFFETASLMSQVSHIHL-AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVA 123 (274)
T ss_pred eeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCe-eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence 3567777643321111 01134444444443333 44555442 2 28999999887632 11111 2367
Q ss_pred HHHHHHHHhhccCCC
Q 024452 131 ELVAAKMREFHDLKM 145 (267)
Q Consensus 131 ~~la~~La~lH~~~~ 145 (267)
.++++.|+-||....
T Consensus 124 ~qi~~~l~~lH~~~i 138 (274)
T cd05076 124 QQLASALSYLEDKNL 138 (274)
T ss_pred HHHHHHHHHHHcCCc
Confidence 889999999998754
No 493
>PHA03111 Ser/Thr kinase; Provisional
Probab=70.59 E-value=4 Score=36.65 Aligned_cols=21 Identities=33% Similarity=0.313 Sum_probs=17.4
Q ss_pred CCcEEEEccCCCCCCeeeeCC
Q 024452 196 HQEIGFCHNDLQYGNIMIDEE 216 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~ 216 (267)
+.-..|+|.|++|+|||+=++
T Consensus 299 p~c~nF~H~DLKPdNILiFds 319 (444)
T PHA03111 299 PCCDNFLHVDLKPDNILIFDS 319 (444)
T ss_pred CCcceeeeccCCCCcEEEecC
Confidence 445789999999999998653
No 494
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=70.15 E-value=1.7 Score=44.28 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=35.5
Q ss_pred EEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHHHHhhhhhheeeeccCCc-hhHhHHH
Q 024452 200 GFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFKRACTKILLILTFSVNSP-MVCMRWL 260 (267)
Q Consensus 200 ~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD~A~~~~~~~~~~~~~~~-~~~~~~~ 260 (267)
.|+|+|+-+.|.|++.. ..|+|-||..|. |+--.+| +..... |+=+||.
T Consensus 822 ~fvHRDLAaRNCLL~~~-r~VKIaDFGlAr------Diy~~~y-----yr~~~~a~lPvkWm 871 (1025)
T KOG1095|consen 822 HFVHRDLAARNCLLDER-RVVKIADFGLAR------DIYDKDY-----YRKHGEAMLPVKWM 871 (1025)
T ss_pred CCcCcchhhhheeeccc-CcEEEcccchhH------hhhhchh-----eeccCccccceecC
Confidence 39999999999999974 788999999886 3333333 333333 6667775
No 495
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=68.58 E-value=1.6 Score=37.03 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=28.7
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcch
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNM 232 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~ 232 (267)
.....+|+|++|.|+|... .+.+.+=||..+-..+
T Consensus 141 h~k~VIhRdiKpenlLlg~-~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 141 HLKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAP 175 (281)
T ss_pred ccCCcccCCCCHHHhccCC-CCCeeccCCCceeecC
Confidence 4456899999999999987 4688999999886653
No 496
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=68.28 E-value=4.6 Score=36.42 Aligned_cols=48 Identities=10% Similarity=0.029 Sum_probs=29.7
Q ss_pred EEEEEecCceeeeeEEEEeCCCCCCCCceEEEEEcCCCccc--ccChHHHHHHHHHHHhC
Q 024452 38 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEV--FFNRDDEIRTFECMSSQ 95 (267)
Q Consensus 38 ~~i~~l~~G~~N~vy~v~~~~~~~~~~~~~vlRi~~~~~~~--~~dr~~E~~~~~~l~~~ 95 (267)
-.+.-++.|.-+-||++ .+||||.--...+. -++...|+.+=+.|...
T Consensus 84 ddfYHisTGGYGivFri----------d~yVvKFv~e~~~~~~p~~~t~EytIPrfLynn 133 (434)
T PF05445_consen 84 DDFYHISTGGYGIVFRI----------DKYVVKFVFEPNKNYSPIDTTAEYTIPRFLYNN 133 (434)
T ss_pred CceEEEecCcceEEEEE----------eeEEEEEEEccccCCCcccccceeeecHHHHhh
Confidence 35556665667888888 58888865333322 23444677777777664
No 497
>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. There are two types of PI4Ks, types II and III. Type II PI4Ks lack the characteristic catalytic kinase domain present in PI3Ks and type III PI4Ks, and are excluded from this family. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes.
Probab=67.19 E-value=4.2 Score=35.58 Aligned_cols=34 Identities=24% Similarity=0.120 Sum_probs=27.9
Q ss_pred CCcEEEEccCCCCCCeeeeCCCCCEEEEeecccCc
Q 024452 196 HQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQ 230 (267)
Q Consensus 196 ~~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~ 230 (267)
-..+++-=||=|++|||++. +|.+.=|||.++--
T Consensus 136 vv~YiLgigDRH~~NILid~-~G~liHIDFG~ilg 169 (289)
T cd00893 136 LLCYLLQIKDRHNGNILLDS-DGHIIHIDFGFILD 169 (289)
T ss_pred HHHHHhhccccCCCceEECC-CCCEEEEehHHhhC
Confidence 34566778999999999997 57899999998843
No 498
>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KII
Probab=67.10 E-value=4.3 Score=35.60 Aligned_cols=32 Identities=28% Similarity=0.160 Sum_probs=27.0
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..+++-=||=|++|||++. +|.+.=|||.++-
T Consensus 139 v~YvLGigDRH~~NILi~~-~G~liHIDFG~~f 170 (293)
T cd05168 139 ICYLLQIKDRHNGNILIDN-DGHIIHIDFGFML 170 (293)
T ss_pred HHHHhhccccCCCceEEcC-CCCEEEEehHHhh
Confidence 3466777999999999997 5789999999884
No 499
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=65.88 E-value=3.4 Score=39.60 Aligned_cols=30 Identities=30% Similarity=0.309 Sum_probs=26.2
Q ss_pred EEEEccCCCCCCeeeeCCCCCEEEEeecccC
Q 024452 199 IGFCHNDLQYGNIMIDEETSSITIIVSFTFL 229 (267)
Q Consensus 199 ~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~ 229 (267)
..|+|+|+-+.|.|++++ ..+.|-||..+.
T Consensus 656 ~nfVHrd~a~rNcLv~~e-~~iKiadfgmsR 685 (807)
T KOG1094|consen 656 LNFVHRDLATRNCLVDGE-FTIKIADFGMSR 685 (807)
T ss_pred hchhhccccccceeecCc-ccEEecCccccc
Confidence 459999999999999974 679999998776
No 500
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=64.89 E-value=1.6 Score=44.74 Aligned_cols=39 Identities=23% Similarity=0.397 Sum_probs=29.9
Q ss_pred CcEEEEccCCCCCCeeeeCCCCCEEEEeecccCcchHhHH
Q 024452 197 QEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNFK 236 (267)
Q Consensus 197 ~~~~l~H~Dl~~~Nilv~~~~~~v~lIDwE~a~~~~~~fD 236 (267)
+....||||++..|||+.. -.-+.|=||--..+-|.-.|
T Consensus 137 H~~gVcHGDIKsENILiTS-WNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 137 HKLGVCHGDIKSENILITS-WNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHcCccccccccceEEEee-echhhhhcccccCCccCCCC
Confidence 5567999999999999986 24567888876666666566
Done!