Query 024455
Match_columns 267
No_of_seqs 398 out of 3159
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 08:30:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024455.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024455hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i13_A AART; DNA binding, zinc 99.9 3.9E-24 1.3E-28 170.6 3.8 136 10-155 17-177 (190)
2 2i13_A AART; DNA binding, zinc 99.9 5.2E-23 1.8E-27 164.0 5.7 118 10-129 45-187 (190)
3 1tf6_A Protein (transcription 99.9 2.2E-22 7.5E-27 160.4 7.8 140 1-155 1-180 (190)
4 1wlj_A Interferon stimulated g 99.9 5E-22 1.7E-26 158.4 7.0 111 135-260 5-115 (189)
5 2dlq_A GLI-kruppel family memb 99.8 2.5E-20 8.5E-25 137.9 7.8 111 10-126 3-117 (124)
6 2lt7_A Transcriptional regulat 99.8 8.6E-21 2.9E-25 142.5 4.7 88 10-109 18-109 (133)
7 1tf6_A Protein (transcription 99.8 8.3E-20 2.8E-24 145.4 7.7 116 10-127 38-188 (190)
8 2jp9_A Wilms tumor 1; DNA bind 99.8 6.5E-20 2.2E-24 134.7 5.9 102 10-125 2-118 (119)
9 2gli_A Protein (five-finger GL 99.8 1.6E-19 5.3E-24 138.9 7.2 111 12-124 1-151 (155)
10 1ubd_C Protein (YY1 zinc finge 99.8 3.5E-19 1.2E-23 131.8 6.6 105 11-128 2-119 (124)
11 2ee8_A Protein ODD-skipped-rel 99.8 3.5E-18 1.2E-22 122.9 9.4 88 8-109 11-104 (106)
12 2p1j_A POLIII, DNA polymerase 99.8 7.5E-19 2.6E-23 139.6 6.0 112 134-259 11-130 (186)
13 2rpc_A Zinc finger protein ZIC 99.7 1.3E-18 4.5E-23 133.8 6.6 108 11-129 22-148 (155)
14 2dmd_A Zinc finger protein 64, 99.7 5.2E-18 1.8E-22 119.7 7.2 86 9-108 3-94 (96)
15 2gui_A DNA polymerase III epsi 99.7 9.3E-18 3.2E-22 134.1 7.2 109 135-257 9-135 (194)
16 2igi_A Oligoribonuclease; RNAs 99.7 3.8E-18 1.3E-22 134.8 4.0 111 136-255 6-133 (180)
17 1a1h_A QGSR zinc finger peptid 99.7 7.7E-18 2.6E-22 117.3 4.5 82 11-106 1-90 (90)
18 1wjp_A Zinc finger protein 295 99.7 9.8E-17 3.4E-21 115.6 7.2 89 9-111 11-103 (107)
19 2yt9_A Zinc finger-containing 99.7 1.3E-16 4.5E-21 112.2 7.0 82 9-104 2-92 (95)
20 1w0h_A 3'-5' exonuclease ERI1; 99.7 5.3E-17 1.8E-21 130.7 4.9 119 134-259 9-146 (204)
21 2kmk_A Zinc finger protein GFI 99.7 5.9E-17 2E-21 110.7 4.4 76 14-103 1-82 (82)
22 2gbz_A Oligoribonuclease; ORN, 99.6 2.4E-17 8.1E-22 131.7 1.3 109 134-257 8-139 (194)
23 1ubd_C Protein (YY1 zinc finge 99.6 2.4E-16 8.1E-21 116.4 6.2 85 11-107 31-123 (124)
24 2gli_A Protein (five-finger GL 99.6 2.5E-16 8.6E-21 120.8 6.3 92 10-103 30-155 (155)
25 1zbh_A 3'-5' exonuclease ERI1; 99.6 2.8E-16 9.6E-21 133.6 6.7 119 134-259 77-214 (299)
26 3mxm_B Three prime repair exon 99.6 1.3E-16 4.3E-21 131.7 3.8 114 135-258 12-158 (242)
27 2lt7_A Transcriptional regulat 99.6 6E-17 2.1E-21 121.4 1.7 103 32-150 12-123 (133)
28 3u3y_B Three prime repair exon 99.6 2.3E-16 7.9E-21 133.6 4.3 113 135-257 12-157 (314)
29 2ebt_A Krueppel-like factor 5; 99.6 1.4E-15 4.7E-20 107.9 7.6 86 4-103 5-100 (100)
30 2csh_A Zinc finger protein 297 99.6 5.5E-16 1.9E-20 112.1 5.3 81 9-104 5-91 (110)
31 1y97_A Three prime repair exon 99.6 1E-15 3.4E-20 126.2 7.3 115 134-258 9-152 (238)
32 2xri_A ERI1 exoribonuclease 3; 99.6 5.2E-16 1.8E-20 126.7 5.1 108 135-256 31-163 (224)
33 2dmi_A Teashirt homolog 3; zin 99.6 9.8E-16 3.3E-20 111.7 6.0 87 10-108 15-110 (115)
34 1zbu_A ERI-1 homolog, 3'-5' ex 99.6 4.6E-16 1.6E-20 134.5 4.6 119 134-259 127-264 (349)
35 4gzn_C ZFP-57, zinc finger pro 99.6 4.1E-16 1.4E-20 100.0 3.1 51 11-63 1-52 (60)
36 3tr8_A Oligoribonuclease; tran 99.6 4.1E-16 1.4E-20 123.1 3.5 114 133-255 7-137 (186)
37 2jp9_A Wilms tumor 1; DNA bind 99.6 8.2E-16 2.8E-20 112.5 4.5 79 11-101 33-119 (119)
38 1llm_C Chimera of ZIF23-GCN4; 99.6 1.7E-16 5.7E-21 110.3 -0.6 81 12-102 1-82 (88)
39 3cg7_A CRN-4, cell death-relat 99.5 9.1E-16 3.1E-20 130.8 2.3 111 135-259 19-155 (308)
40 2f96_A Ribonuclease T; RNAse, 99.5 3.4E-15 1.1E-19 121.9 5.3 121 134-259 28-167 (224)
41 2wbs_A Krueppel-like factor 4; 99.5 5.9E-15 2E-19 102.2 4.7 78 11-102 2-89 (89)
42 2dlq_A GLI-kruppel family memb 99.5 1.3E-14 4.4E-19 106.8 6.5 83 10-104 31-121 (124)
43 3v9w_A Ribonuclease T; DEDD nu 99.5 8.7E-15 3E-19 120.3 4.5 121 134-259 36-175 (235)
44 2dlk_A Novel protein; ZF-C2H2 99.5 2.5E-14 8.5E-19 96.9 5.5 66 10-77 3-79 (79)
45 2dmi_A Teashirt homolog 3; zin 99.5 9.7E-16 3.3E-20 111.7 -1.8 94 27-128 4-105 (115)
46 2j7j_A Transcription factor II 99.5 2.1E-14 7.4E-19 98.4 4.2 74 14-102 1-85 (85)
47 2rpc_A Zinc finger protein ZIC 99.5 9.7E-14 3.3E-18 106.3 7.1 109 40-160 21-143 (155)
48 2dmd_A Zinc finger protein 64, 99.4 2.5E-13 8.6E-18 95.3 6.6 79 39-129 3-90 (96)
49 2qxf_A Exodeoxyribonuclease I; 99.4 1.3E-13 4.4E-18 123.7 6.2 99 134-245 8-114 (482)
50 2ghf_A ZHX1, zinc fingers and 99.4 6.6E-14 2.3E-18 99.6 3.5 71 9-112 13-85 (102)
51 2cot_A Zinc finger protein 435 99.4 3.7E-13 1.3E-17 90.7 6.3 65 9-109 13-77 (77)
52 4gzn_C ZFP-57, zinc finger pro 99.4 1.1E-13 3.9E-18 88.5 2.6 51 42-104 2-58 (60)
53 1wjp_A Zinc finger protein 295 99.4 2.1E-13 7.2E-18 97.9 3.3 81 33-128 7-95 (107)
54 2ee8_A Protein ODD-skipped-rel 99.4 1.1E-12 3.7E-17 93.8 6.5 78 40-129 13-99 (106)
55 2lce_A B-cell lymphoma 6 prote 99.3 7.8E-13 2.7E-17 88.4 5.0 64 8-107 11-74 (74)
56 2lv2_A Insulinoma-associated p 99.3 7.6E-13 2.6E-17 90.9 4.9 53 9-63 23-76 (85)
57 1x5w_A Zinc finger protein 64, 99.3 1.2E-12 4.2E-17 86.4 5.2 52 9-62 4-56 (70)
58 3uk3_C Zinc finger protein 217 99.3 4.8E-13 1.7E-17 84.5 2.9 51 11-63 1-52 (57)
59 2kmk_A Zinc finger protein GFI 99.3 4.7E-13 1.6E-17 91.0 2.7 70 45-126 3-80 (82)
60 1x6h_A Transcriptional repress 99.3 1.8E-12 6.1E-17 88.9 5.7 27 10-36 11-37 (86)
61 1a1h_A QGSR zinc finger peptid 99.3 7.8E-13 2.7E-17 91.6 3.8 75 42-128 2-87 (90)
62 2csh_A Zinc finger protein 297 99.3 6.7E-13 2.3E-17 95.6 3.4 77 39-128 5-90 (110)
63 2gqj_A Zinc finger protein KIA 99.3 4.2E-13 1.5E-17 94.9 1.6 72 23-108 5-84 (98)
64 2wbt_A B-129; zinc finger; 2.7 99.3 3.1E-13 1.1E-17 100.3 0.4 101 10-128 8-125 (129)
65 2yt9_A Zinc finger-containing 99.3 3.2E-12 1.1E-16 89.4 5.2 74 39-124 2-86 (95)
66 1x6h_A Transcriptional repress 99.3 9.1E-13 3.1E-17 90.4 2.2 78 29-111 2-80 (86)
67 1x6e_A Zinc finger protein 24; 99.3 2.7E-12 9.2E-17 85.2 3.8 52 9-62 9-61 (72)
68 2cot_A Zinc finger protein 435 99.3 3E-12 1E-16 86.2 3.9 48 81-128 21-71 (77)
69 2ej4_A Zinc finger protein ZIC 99.3 1.6E-11 5.5E-16 85.8 7.6 69 14-110 25-94 (95)
70 2drp_A Protein (tramtrack DNA- 99.2 2.9E-12 9.7E-17 83.5 3.1 53 10-63 6-60 (66)
71 2adr_A ADR1; transcription reg 99.2 4.7E-12 1.6E-16 80.8 3.9 49 13-63 1-50 (60)
72 2lce_A B-cell lymphoma 6 prote 99.2 8.2E-12 2.8E-16 83.3 5.2 48 81-128 20-70 (74)
73 2ctd_A Zinc finger protein 512 99.2 5.8E-12 2E-16 88.7 4.6 73 22-108 14-93 (96)
74 2d9h_A Zinc finger protein 692 99.2 3.4E-12 1.2E-16 86.0 2.3 30 10-41 3-32 (78)
75 2wbs_A Krueppel-like factor 4; 99.2 8.2E-12 2.8E-16 86.1 4.1 72 45-126 7-88 (89)
76 1bbo_A Human enhancer-binding 99.2 1.1E-11 3.6E-16 78.2 4.1 48 14-63 1-49 (57)
77 2ebt_A Krueppel-like factor 5; 99.2 1.2E-11 4.2E-16 87.2 4.8 75 42-126 13-98 (100)
78 1x5w_A Zinc finger protein 64, 99.2 1.2E-11 4.1E-16 81.5 3.7 58 39-108 4-67 (70)
79 2eps_A POZ-, at HOOK-, and zin 99.2 2.2E-11 7.4E-16 76.1 4.5 46 8-55 6-53 (54)
80 2ct1_A Transcriptional repress 99.2 1.8E-11 6.2E-16 82.2 4.2 26 10-35 11-36 (77)
81 2ctd_A Zinc finger protein 512 99.2 1.4E-11 4.9E-16 86.6 3.7 50 11-63 31-83 (96)
82 2ctu_A Zinc finger protein 483 99.1 8.2E-14 2.8E-18 92.6 -8.2 69 27-111 3-72 (73)
83 2wbt_A B-129; zinc finger; 2.7 99.1 3.5E-12 1.2E-16 94.6 -0.4 79 11-104 38-126 (129)
84 2ct1_A Transcriptional repress 99.1 6.6E-12 2.3E-16 84.4 0.9 61 30-104 3-71 (77)
85 1x6e_A Zinc finger protein 24; 99.1 1.4E-11 4.9E-16 81.7 2.3 59 34-106 6-70 (72)
86 2ghf_A ZHX1, zinc fingers and 99.1 2E-11 7E-16 86.6 3.0 58 81-146 21-86 (102)
87 1f2i_G Fusion of N-terminal 17 99.1 3.6E-11 1.2E-15 79.8 4.0 53 9-63 14-69 (73)
88 2gqj_A Zinc finger protein KIA 99.1 1E-11 3.5E-16 87.7 0.8 52 10-63 20-74 (98)
89 1llm_C Chimera of ZIF23-GCN4; 99.1 8E-12 2.7E-16 86.3 -0.6 73 42-127 1-82 (88)
90 2epr_A POZ-, at HOOK-, and zin 99.1 9.5E-11 3.3E-15 71.1 4.2 43 7-51 5-48 (48)
91 2dlk_A Novel protein; ZF-C2H2 99.1 9.6E-11 3.3E-15 78.9 4.5 63 39-113 2-78 (79)
92 2j7j_A Transcription factor II 99.0 8.1E-11 2.8E-15 80.2 3.3 70 45-126 3-84 (85)
93 2epa_A Krueppel-like factor 10 99.0 2.2E-10 7.5E-15 75.7 4.7 54 8-63 11-69 (72)
94 2drp_A Protein (tramtrack DNA- 99.0 8.3E-11 2.8E-15 76.4 1.8 55 39-103 5-65 (66)
95 2epq_A POZ-, at HOOK-, and zin 99.0 3E-10 1E-14 67.8 3.3 40 9-50 5-45 (45)
96 3uk3_C Zinc finger protein 217 99.0 2.9E-10 1E-14 71.4 3.0 46 45-102 6-56 (57)
97 2ytn_A Zinc finger protein 347 98.9 8.5E-10 2.9E-14 66.1 4.1 39 9-49 7-46 (46)
98 2lv2_A Insulinoma-associated p 98.9 3.9E-10 1.3E-14 77.2 2.7 43 81-123 31-76 (85)
99 2d9h_A Zinc finger protein 692 98.9 4.8E-10 1.6E-14 75.3 3.0 60 39-108 2-69 (78)
100 2eq4_A Zinc finger protein 224 98.9 1E-09 3.5E-14 65.7 4.2 39 9-49 7-46 (46)
101 2ytq_A Zinc finger protein 268 98.9 9.4E-10 3.2E-14 65.9 4.0 39 9-49 7-46 (46)
102 2elz_A Zinc finger protein 224 98.9 8.6E-10 3E-14 66.1 3.8 39 9-49 7-46 (46)
103 2eoq_A Zinc finger protein 224 98.9 1.1E-09 3.8E-14 65.6 4.2 39 9-49 7-46 (46)
104 2emk_A Zinc finger protein 28 98.9 8.9E-10 3E-14 66.0 3.8 39 9-49 7-46 (46)
105 2emf_A Zinc finger protein 484 98.9 8.5E-10 2.9E-14 66.1 3.7 39 9-49 7-46 (46)
106 2el4_A Zinc finger protein 268 98.9 9.3E-10 3.2E-14 65.9 3.8 39 9-49 7-46 (46)
107 2epz_A Zinc finger protein 28 98.9 1E-09 3.5E-14 65.7 3.9 39 9-49 7-46 (46)
108 2emx_A Zinc finger protein 268 98.9 7.4E-10 2.5E-14 65.7 3.3 39 9-49 5-44 (44)
109 2eoe_A Zinc finger protein 347 98.9 9.8E-10 3.4E-14 65.8 3.8 39 9-49 7-46 (46)
110 2enc_A Zinc finger protein 224 98.9 1.1E-09 3.7E-14 65.6 4.0 39 9-49 7-46 (46)
111 2ene_A Zinc finger protein 347 98.9 9.5E-10 3.3E-14 65.9 3.7 39 9-49 7-46 (46)
112 2em0_A Zinc finger protein 224 98.9 9.9E-10 3.4E-14 65.8 3.7 39 9-49 7-46 (46)
113 2em7_A Zinc finger protein 224 98.9 9.4E-10 3.2E-14 65.9 3.6 39 9-49 7-46 (46)
114 2eop_A Zinc finger protein 268 98.9 1.1E-09 3.8E-14 65.5 3.9 39 9-49 7-46 (46)
115 2eq0_A Zinc finger protein 347 98.9 9.4E-10 3.2E-14 65.9 3.6 39 9-49 7-46 (46)
116 2eml_A Zinc finger protein 28 98.9 9.8E-10 3.3E-14 65.8 3.6 39 9-49 7-46 (46)
117 2ep2_A Zinc finger protein 484 98.9 1.1E-09 3.7E-14 65.6 3.7 39 9-49 7-46 (46)
118 2emm_A ZFP-95, zinc finger pro 98.9 9.5E-10 3.2E-14 65.8 3.4 39 9-49 7-46 (46)
119 2ytj_A Zinc finger protein 484 98.9 1.3E-09 4.3E-14 65.3 4.0 39 9-49 7-46 (46)
120 2eod_A TNF receptor-associated 98.9 2.8E-10 9.6E-15 74.0 1.0 50 10-63 6-57 (66)
121 2el6_A Zinc finger protein 268 98.9 1.1E-09 3.8E-14 65.6 3.7 39 9-49 7-46 (46)
122 2epw_A Zinc finger protein 268 98.9 1.1E-09 3.8E-14 65.5 3.7 39 9-49 7-46 (46)
123 2emy_A Zinc finger protein 268 98.9 9.5E-10 3.2E-14 65.9 3.3 39 9-49 7-46 (46)
124 2ytr_A Zinc finger protein 347 98.9 1.1E-09 3.8E-14 65.5 3.6 39 9-49 7-46 (46)
125 2ely_A Zinc finger protein 224 98.9 9.4E-10 3.2E-14 65.9 3.3 39 9-49 7-46 (46)
126 2ysp_A Zinc finger protein 224 98.9 1E-09 3.4E-14 65.8 3.4 39 9-49 7-46 (46)
127 2em5_A ZFP-95, zinc finger pro 98.9 1.2E-09 4E-14 65.5 3.7 39 9-49 7-46 (46)
128 2ema_A Zinc finger protein 347 98.9 1.1E-09 3.6E-14 65.6 3.4 39 9-49 7-46 (46)
129 2eov_A Zinc finger protein 484 98.9 1.2E-09 4.2E-14 65.3 3.7 39 9-49 7-46 (46)
130 2ytd_A Zinc finger protein 473 98.9 1.1E-09 3.8E-14 65.5 3.5 39 9-49 7-46 (46)
131 2en8_A Zinc finger protein 224 98.9 1.2E-09 4.1E-14 65.3 3.6 39 9-49 7-46 (46)
132 2ytm_A Zinc finger protein 28 98.9 9.1E-10 3.1E-14 66.0 3.0 39 9-49 7-46 (46)
133 2en6_A Zinc finger protein 268 98.9 1E-09 3.6E-14 65.7 3.2 39 9-49 7-46 (46)
134 2ytk_A Zinc finger protein 347 98.9 1.1E-09 3.7E-14 65.6 3.2 39 9-49 7-46 (46)
135 2eme_A Zinc finger protein 473 98.9 1.4E-09 4.8E-14 65.0 3.7 39 9-49 7-46 (46)
136 2em9_A Zinc finger protein 224 98.9 1.3E-09 4.4E-14 65.2 3.6 39 9-49 7-46 (46)
137 2epx_A Zinc finger protein 28 98.9 1.6E-09 5.4E-14 65.1 3.9 39 9-49 7-47 (47)
138 2eoo_A ZFP-95, zinc finger pro 98.9 8.8E-10 3E-14 66.0 2.7 39 9-49 7-46 (46)
139 2en1_A Zinc finger protein 224 98.9 1.3E-09 4.5E-14 65.2 3.4 39 9-49 7-46 (46)
140 2yso_A ZFP-95, zinc finger pro 98.9 1.3E-09 4.3E-14 65.3 3.3 39 9-49 7-46 (46)
141 2ep0_A Zinc finger protein 28 98.9 1.5E-09 5.1E-14 65.0 3.5 39 9-49 7-46 (46)
142 2emh_A Zinc finger protein 484 98.9 9.9E-10 3.4E-14 65.8 2.7 39 9-49 7-46 (46)
143 2emp_A Zinc finger protein 347 98.9 1.1E-09 3.7E-14 65.6 2.8 39 9-49 7-46 (46)
144 2em8_A Zinc finger protein 224 98.9 1.1E-09 3.7E-14 65.7 2.8 39 9-49 7-46 (46)
145 1f2i_G Fusion of N-terminal 17 98.9 4.8E-10 1.6E-14 74.2 1.1 61 29-102 5-73 (73)
146 2yu8_A Zinc finger protein 347 98.8 9.1E-10 3.1E-14 65.9 2.2 39 9-49 7-46 (46)
147 2ytg_A ZFP-95, zinc finger pro 98.8 1E-09 3.4E-14 65.7 2.1 39 9-49 7-46 (46)
148 2ep3_A Zinc finger protein 484 98.8 2.1E-09 7.1E-14 64.3 3.5 39 9-49 7-46 (46)
149 2ytt_A Zinc finger protein 473 98.8 1.9E-09 6.4E-14 64.6 2.9 39 9-49 7-46 (46)
150 1bbo_A Human enhancer-binding 98.8 2.2E-09 7.4E-14 67.3 3.2 49 45-105 3-56 (57)
151 1x3c_A Zinc finger protein 292 98.8 5.8E-09 2E-13 67.3 5.1 42 5-48 18-63 (73)
152 2em2_A Zinc finger protein 28 98.8 2.9E-09 1E-13 63.7 3.5 39 9-49 7-46 (46)
153 2yrm_A B-cell lymphoma 6 prote 98.8 5.7E-09 2E-13 61.5 3.6 38 9-48 5-43 (43)
154 2ytp_A Zinc finger protein 484 98.7 7.1E-09 2.4E-13 61.9 3.6 38 9-48 7-45 (46)
155 2enf_A Zinc finger protein 347 98.7 8E-09 2.8E-13 61.7 3.8 38 9-48 7-45 (46)
156 2yte_A Zinc finger protein 473 98.7 1E-08 3.5E-13 59.8 4.1 36 10-47 6-42 (42)
157 2ctu_A Zinc finger protein 483 98.7 4E-10 1.4E-14 74.4 -2.4 54 10-72 14-73 (73)
158 2el5_A Zinc finger protein 268 98.7 7.8E-09 2.7E-13 60.4 3.5 36 10-47 6-42 (42)
159 2eoh_A Zinc finger protein 28 98.7 1.1E-08 3.7E-13 61.2 4.2 38 9-48 7-45 (46)
160 2eod_A TNF receptor-associated 98.7 3.1E-09 1E-13 69.0 1.8 55 39-106 5-65 (66)
161 2yti_A Zinc finger protein 347 98.7 8.6E-09 3E-13 61.5 3.7 38 9-48 7-45 (46)
162 1vd4_A Transcription initiatio 98.7 5.8E-10 2E-14 71.6 -1.7 49 9-62 9-58 (62)
163 2emg_A Zinc finger protein 484 98.7 9.9E-09 3.4E-13 61.3 3.8 38 9-48 7-45 (46)
164 2eon_A ZFP-95, zinc finger pro 98.7 8.3E-09 2.8E-13 61.7 3.5 38 9-48 7-45 (46)
165 2emj_A Zinc finger protein 28 98.7 7.8E-09 2.7E-13 61.8 3.3 38 9-48 7-45 (46)
166 2ept_A Zinc finger protein 32; 98.7 9E-09 3.1E-13 59.8 3.5 36 9-46 5-41 (41)
167 2yth_A Zinc finger protein 224 98.7 1E-08 3.6E-13 61.2 3.9 38 9-48 7-45 (46)
168 2eln_A Zinc finger protein 406 98.7 7.8E-09 2.7E-13 59.3 3.1 33 8-42 3-37 (38)
169 2ytf_A Zinc finger protein 268 98.7 9.1E-09 3.1E-13 61.4 3.6 38 9-48 7-45 (46)
170 2yts_A Zinc finger protein 484 98.7 9.4E-09 3.2E-13 61.3 3.6 38 9-48 7-45 (46)
171 2em4_A Zinc finger protein 28 98.7 7.7E-09 2.6E-13 61.8 3.2 38 9-48 7-45 (46)
172 2em6_A Zinc finger protein 224 98.7 1E-08 3.6E-13 61.2 3.8 38 9-48 7-45 (46)
173 2eq2_A Zinc finger protein 347 98.7 9.7E-09 3.3E-13 61.3 3.7 38 9-48 7-45 (46)
174 2adr_A ADR1; transcription reg 98.7 7.3E-09 2.5E-13 65.6 3.2 43 81-123 5-50 (60)
175 2epu_A Zinc finger protein 32; 98.7 8.4E-09 2.9E-13 61.3 3.3 38 9-48 7-45 (45)
176 2enh_A Zinc finger protein 28 98.7 1.1E-08 3.6E-13 61.2 3.7 38 9-48 7-45 (46)
177 2eom_A ZFP-95, zinc finger pro 98.7 1E-08 3.5E-13 61.3 3.6 38 9-48 7-45 (46)
178 2ent_A Krueppel-like factor 15 98.7 1.1E-08 3.7E-13 61.6 3.7 39 9-49 7-48 (48)
179 2epc_A Zinc finger protein 32; 98.7 1.2E-08 4.1E-13 59.6 3.8 36 9-46 6-42 (42)
180 2en9_A Zinc finger protein 28 98.7 1E-08 3.6E-13 61.2 3.5 38 9-48 7-45 (46)
181 2emi_A Zinc finger protein 484 98.7 1E-08 3.5E-13 61.2 3.5 38 9-48 7-45 (46)
182 2ep1_A Zinc finger protein 484 98.7 1.2E-08 4E-13 60.9 3.7 38 9-48 7-45 (46)
183 2eq1_A Zinc finger protein 347 98.7 1.3E-08 4.3E-13 60.8 3.7 38 9-48 7-45 (46)
184 2eow_A Zinc finger protein 347 98.7 9.7E-09 3.3E-13 61.3 3.2 38 9-48 7-45 (46)
185 2eoj_A Zinc finger protein 268 98.7 1E-08 3.6E-13 60.5 3.3 37 9-47 7-44 (44)
186 2em3_A Zinc finger protein 28 98.7 9.8E-09 3.3E-13 61.3 3.2 38 9-48 7-45 (46)
187 2eof_A Zinc finger protein 268 98.7 1.3E-08 4.4E-13 60.1 3.7 37 9-47 7-44 (44)
188 2yrj_A Zinc finger protein 473 98.7 1.2E-08 4.1E-13 60.8 3.5 38 9-48 7-45 (46)
189 2eos_A B-cell lymphoma 6 prote 98.7 1.1E-08 3.9E-13 59.7 3.3 35 10-46 7-42 (42)
190 2en7_A Zinc finger protein 268 98.7 1.3E-08 4.5E-13 60.0 3.5 37 9-47 7-44 (44)
191 2yto_A Zinc finger protein 484 98.7 1.2E-08 4.2E-13 60.9 3.3 38 9-48 7-45 (46)
192 2eoy_A Zinc finger protein 473 98.7 1.2E-08 4.2E-13 60.9 3.2 38 9-48 7-46 (46)
193 2yu5_A Zinc finger protein 473 98.7 1.6E-08 5.3E-13 59.8 3.5 37 9-47 7-44 (44)
194 2emb_A Zinc finger protein 473 98.7 1.6E-08 5.3E-13 59.8 3.5 37 9-47 7-44 (44)
195 2eoz_A Zinc finger protein 473 98.7 1.3E-08 4.5E-13 60.8 3.1 38 9-48 7-45 (46)
196 2eor_A Zinc finger protein 224 98.7 1E-08 3.6E-13 61.1 2.6 38 9-48 7-45 (46)
197 2eou_A Zinc finger protein 473 98.7 1.5E-08 5.2E-13 59.9 3.3 37 9-47 7-44 (44)
198 2eq3_A Zinc finger protein 347 98.7 1.8E-08 6.1E-13 60.1 3.6 38 9-48 7-45 (46)
199 2ytb_A Zinc finger protein 32; 98.7 1.2E-08 4.1E-13 59.5 2.7 36 9-46 6-42 (42)
200 2en2_A B-cell lymphoma 6 prote 98.6 9.6E-09 3.3E-13 60.0 2.2 36 9-46 6-42 (42)
201 2elx_A Zinc finger protein 406 98.6 2.1E-08 7.3E-13 55.8 3.6 33 10-44 3-35 (35)
202 1njq_A Superman protein; zinc- 98.6 2.5E-08 8.5E-13 57.2 3.5 33 10-44 2-34 (39)
203 1srk_A Zinc finger protein ZFP 98.6 2.5E-08 8.7E-13 55.6 3.2 33 10-44 3-35 (35)
204 2emz_A ZFP-95, zinc finger pro 98.6 1.4E-08 4.6E-13 60.7 2.2 37 9-47 7-44 (46)
205 2elo_A Zinc finger protein 406 98.6 2.4E-08 8.2E-13 56.5 2.9 34 9-44 4-37 (37)
206 2epv_A Zinc finger protein 268 98.6 3.4E-08 1.2E-12 58.3 3.5 36 9-46 7-43 (44)
207 2eps_A POZ-, at HOOK-, and zin 98.6 2.7E-08 9.1E-13 61.7 3.1 40 39-78 7-53 (54)
208 2en3_A ZFP-95, zinc finger pro 98.6 1.6E-08 5.6E-13 60.3 1.6 37 9-47 7-44 (46)
209 2eox_A Zinc finger protein 473 98.6 1.9E-08 6.6E-13 59.3 1.7 36 9-46 7-43 (44)
210 2ytn_A Zinc finger protein 347 98.6 2E-08 7E-13 59.9 1.8 30 81-110 15-44 (46)
211 2eq4_A Zinc finger protein 224 98.6 2.1E-08 7.2E-13 59.8 1.9 31 81-111 15-45 (46)
212 2epz_A Zinc finger protein 28 98.6 2.1E-08 7.1E-13 59.8 1.8 30 81-110 15-44 (46)
213 2ej4_A Zinc finger protein ZIC 98.5 9.2E-08 3.2E-12 66.3 5.4 63 66-128 13-87 (95)
214 2em0_A Zinc finger protein 224 98.5 2.3E-08 7.7E-13 59.7 1.9 30 81-110 15-44 (46)
215 2elz_A Zinc finger protein 224 98.5 2.3E-08 7.8E-13 59.7 1.9 30 81-110 15-44 (46)
216 2emx_A Zinc finger protein 268 98.5 1.7E-08 5.7E-13 59.6 1.2 31 81-111 13-43 (44)
217 2emf_A Zinc finger protein 484 98.5 1.9E-08 6.5E-13 60.0 1.4 30 81-110 15-44 (46)
218 2emk_A Zinc finger protein 28 98.5 2.2E-08 7.6E-13 59.7 1.7 31 81-111 15-45 (46)
219 2elv_A Zinc finger protein 406 98.5 6.1E-08 2.1E-12 54.4 3.5 33 9-43 4-36 (36)
220 2emm_A ZFP-95, zinc finger pro 98.5 2E-08 6.7E-13 59.9 1.4 31 81-111 15-45 (46)
221 2ytr_A Zinc finger protein 347 98.5 2.4E-08 8.2E-13 59.5 1.7 30 81-110 15-44 (46)
222 2ytq_A Zinc finger protein 268 98.5 2.6E-08 8.8E-13 59.4 1.8 30 81-110 15-44 (46)
223 2eop_A Zinc finger protein 268 98.5 2.4E-08 8.3E-13 59.5 1.7 30 81-110 15-44 (46)
224 2yte_A Zinc finger protein 473 98.5 5.4E-08 1.9E-12 56.6 3.1 30 81-110 13-42 (42)
225 2eml_A Zinc finger protein 28 98.5 2.1E-08 7E-13 59.8 1.3 30 81-110 15-44 (46)
226 2eoq_A Zinc finger protein 224 98.5 2.5E-08 8.4E-13 59.5 1.6 31 81-111 15-45 (46)
227 2el4_A Zinc finger protein 268 98.5 2.3E-08 7.9E-13 59.6 1.5 30 81-110 15-44 (46)
228 2ema_A Zinc finger protein 347 98.5 2.1E-08 7.3E-13 59.8 1.3 30 81-110 15-44 (46)
229 2em7_A Zinc finger protein 224 98.5 2.5E-08 8.5E-13 59.5 1.6 30 81-110 15-44 (46)
230 2ene_A Zinc finger protein 347 98.5 2E-08 7E-13 59.9 1.2 30 81-110 15-44 (46)
231 2emh_A Zinc finger protein 484 98.5 2.1E-08 7.3E-13 59.8 1.3 30 81-110 15-44 (46)
232 2eov_A Zinc finger protein 484 98.5 2.5E-08 8.4E-13 59.5 1.6 31 81-111 15-45 (46)
233 2ytm_A Zinc finger protein 28 98.5 2.9E-08 1E-12 59.2 1.9 31 81-111 15-45 (46)
234 2em9_A Zinc finger protein 224 98.5 2.5E-08 8.4E-13 59.4 1.5 30 81-110 15-44 (46)
235 2ytj_A Zinc finger protein 484 98.5 2.6E-08 8.9E-13 59.4 1.6 31 81-111 15-45 (46)
236 2elq_A Zinc finger protein 406 98.5 8.5E-08 2.9E-12 53.8 3.7 33 9-43 4-36 (36)
237 2ely_A Zinc finger protein 224 98.5 2E-08 6.8E-13 59.9 1.0 31 81-111 15-45 (46)
238 2en1_A Zinc finger protein 224 98.5 2.9E-08 9.8E-13 59.2 1.7 30 81-110 15-44 (46)
239 2eq0_A Zinc finger protein 347 98.5 2.2E-08 7.7E-13 59.7 1.2 30 81-110 15-44 (46)
240 2eoo_A ZFP-95, zinc finger pro 98.5 2.2E-08 7.6E-13 59.7 1.2 31 81-111 15-45 (46)
241 2emp_A Zinc finger protein 347 98.5 2.4E-08 8.2E-13 59.5 1.3 31 81-111 15-45 (46)
242 2emy_A Zinc finger protein 268 98.5 2.3E-08 7.8E-13 59.6 1.2 31 81-111 15-45 (46)
243 2ep2_A Zinc finger protein 484 98.5 2.7E-08 9.1E-13 59.3 1.4 30 81-110 15-44 (46)
244 2ytk_A Zinc finger protein 347 98.5 2.4E-08 8.2E-13 59.5 1.2 30 81-110 15-44 (46)
245 2eoe_A Zinc finger protein 347 98.5 2.4E-08 8.2E-13 59.5 1.2 31 81-111 15-45 (46)
246 2em5_A ZFP-95, zinc finger pro 98.5 2.5E-08 8.5E-13 59.5 1.3 30 81-110 15-44 (46)
247 1yui_A GAGA-factor; complex (D 98.5 1.9E-08 6.6E-13 62.3 0.8 27 81-107 27-53 (54)
248 2eme_A Zinc finger protein 473 98.5 2.9E-08 9.9E-13 59.1 1.4 30 81-110 15-44 (46)
249 2yu8_A Zinc finger protein 347 98.5 2.2E-08 7.7E-13 59.7 0.9 30 81-110 15-44 (46)
250 2ysp_A Zinc finger protein 224 98.5 2.5E-08 8.5E-13 59.5 1.1 30 81-110 15-44 (46)
251 2elr_A Zinc finger protein 406 98.5 9.7E-08 3.3E-12 53.5 3.5 33 9-43 4-36 (36)
252 2ytg_A ZFP-95, zinc finger pro 98.5 2.3E-08 7.9E-13 59.6 0.9 30 81-110 15-44 (46)
253 2elt_A Zinc finger protein 406 98.5 9.4E-08 3.2E-12 53.5 3.4 33 9-43 4-36 (36)
254 1rim_A E6APC2 peptide; E6-bind 98.5 7E-08 2.4E-12 53.2 2.8 30 13-44 1-30 (33)
255 2ytd_A Zinc finger protein 473 98.5 3E-08 1E-12 59.1 1.3 31 81-111 15-45 (46)
256 2enc_A Zinc finger protein 224 98.5 3.1E-08 1E-12 59.1 1.3 31 81-111 15-45 (46)
257 2en8_A Zinc finger protein 224 98.5 3E-08 1E-12 59.1 1.2 30 81-110 15-44 (46)
258 2epp_A POZ-, at HOOK-, and zin 98.5 9.9E-08 3.4E-12 61.7 3.6 40 9-50 8-47 (66)
259 2en6_A Zinc finger protein 268 98.5 3E-08 1E-12 59.1 1.1 31 81-111 15-45 (46)
260 2epw_A Zinc finger protein 268 98.5 2.6E-08 8.9E-13 59.3 0.8 31 81-111 15-45 (46)
261 2els_A Zinc finger protein 406 98.5 9.1E-08 3.1E-12 53.7 3.0 33 9-43 4-36 (36)
262 2yso_A ZFP-95, zinc finger pro 98.5 3.4E-08 1.2E-12 58.8 1.2 31 81-111 15-45 (46)
263 2el5_A Zinc finger protein 268 98.5 7.4E-08 2.5E-12 56.1 2.7 30 81-110 13-42 (42)
264 2em8_A Zinc finger protein 224 98.5 3.5E-08 1.2E-12 58.8 1.2 31 81-111 15-45 (46)
265 2el6_A Zinc finger protein 268 98.5 4.2E-08 1.4E-12 58.5 1.4 30 81-110 15-44 (46)
266 2eoh_A Zinc finger protein 28 98.5 1E-07 3.6E-12 56.7 3.2 31 81-111 15-45 (46)
267 2ep3_A Zinc finger protein 484 98.4 4.3E-08 1.5E-12 58.4 1.4 31 81-111 15-45 (46)
268 1p7a_A BF3, BKLF, kruppel-like 98.4 1.4E-07 4.7E-12 53.2 3.4 32 9-42 6-37 (37)
269 2yrm_A B-cell lymphoma 6 prote 98.4 1.2E-07 4.1E-12 55.6 3.0 30 81-110 13-42 (43)
270 1vd4_A Transcription initiatio 98.4 6.9E-09 2.3E-13 66.5 -2.7 48 30-79 2-52 (62)
271 2epa_A Krueppel-like factor 10 98.4 9.3E-08 3.2E-12 62.8 2.8 40 84-123 25-69 (72)
272 2eox_A Zinc finger protein 473 98.4 7.2E-08 2.5E-12 56.8 1.9 30 81-110 15-44 (44)
273 2eou_A Zinc finger protein 473 98.4 1.3E-07 4.5E-12 55.7 3.0 30 81-110 15-44 (44)
274 2eom_A ZFP-95, zinc finger pro 98.4 1.4E-07 4.6E-12 56.2 3.0 30 81-110 15-44 (46)
275 2em3_A Zinc finger protein 28 98.4 1.4E-07 4.6E-12 56.2 3.0 31 81-111 15-45 (46)
276 2elm_A Zinc finger protein 406 98.4 1.3E-07 4.3E-12 53.6 2.7 31 10-42 5-36 (37)
277 2eof_A Zinc finger protein 268 98.4 1.3E-07 4.4E-12 55.6 2.8 30 81-110 15-44 (44)
278 1fv5_A First zinc finger of U- 98.4 1.5E-07 5.1E-12 53.1 2.9 29 8-36 2-30 (36)
279 2emj_A Zinc finger protein 28 98.4 1.5E-07 5.1E-12 56.0 3.0 31 81-111 15-45 (46)
280 2enf_A Zinc finger protein 347 98.4 1.2E-07 4.2E-12 56.4 2.6 31 81-111 15-45 (46)
281 2en9_A Zinc finger protein 28 98.4 1.7E-07 5.8E-12 55.8 3.2 31 81-111 15-45 (46)
282 2epx_A Zinc finger protein 28 98.4 8.2E-08 2.8E-12 57.3 1.8 31 81-111 15-46 (47)
283 2m0d_A Zinc finger and BTB dom 98.4 1.7E-07 6E-12 49.8 2.9 30 12-43 1-30 (30)
284 2em4_A Zinc finger protein 28 98.4 1.5E-07 5E-12 56.0 2.9 31 81-111 15-45 (46)
285 2yto_A Zinc finger protein 484 98.4 1.6E-07 5.3E-12 55.9 3.0 31 81-111 15-45 (46)
286 2enh_A Zinc finger protein 28 98.4 1.2E-07 4.2E-12 56.4 2.5 31 81-111 15-45 (46)
287 2yti_A Zinc finger protein 347 98.4 1.3E-07 4.5E-12 56.2 2.6 31 81-111 15-45 (46)
288 2ytp_A Zinc finger protein 484 98.4 1.2E-07 4.2E-12 56.4 2.4 31 81-111 15-45 (46)
289 2ytf_A Zinc finger protein 268 98.4 1.3E-07 4.4E-12 56.2 2.5 31 81-111 15-45 (46)
290 2epu_A Zinc finger protein 32; 98.4 1.1E-07 3.6E-12 56.4 2.1 30 81-110 15-44 (45)
291 2ep1_A Zinc finger protein 484 98.4 1.6E-07 5.5E-12 55.8 3.0 31 81-111 15-45 (46)
292 2eow_A Zinc finger protein 347 98.4 1.6E-07 5.6E-12 55.7 3.0 31 81-111 15-45 (46)
293 2yth_A Zinc finger protein 224 98.4 1.4E-07 4.7E-12 56.2 2.6 31 81-111 15-45 (46)
294 2emg_A Zinc finger protein 484 98.4 1.3E-07 4.6E-12 56.2 2.5 30 81-110 15-44 (46)
295 2eq2_A Zinc finger protein 347 98.4 1.4E-07 4.8E-12 56.1 2.6 31 81-111 15-45 (46)
296 2em2_A Zinc finger protein 28 98.4 7.1E-08 2.4E-12 57.5 1.3 31 81-111 15-45 (46)
297 2en7_A Zinc finger protein 268 98.4 1.3E-07 4.3E-12 55.6 2.4 30 81-110 15-44 (44)
298 2emi_A Zinc finger protein 484 98.4 1.5E-07 5.3E-12 55.9 2.8 31 81-111 15-45 (46)
299 2yu5_A Zinc finger protein 473 98.4 1.6E-07 5.4E-12 55.3 2.8 30 81-110 15-44 (44)
300 2epc_A Zinc finger protein 32; 98.4 1.6E-07 5.6E-12 54.5 2.8 29 81-109 14-42 (42)
301 2em6_A Zinc finger protein 224 98.4 1.5E-07 5E-12 56.0 2.6 31 81-111 15-45 (46)
302 2eor_A Zinc finger protein 224 98.4 1.6E-07 5.4E-12 55.8 2.7 31 81-111 15-45 (46)
303 3iuf_A Zinc finger protein UBI 98.4 1.6E-07 5.4E-12 56.6 2.7 33 10-44 3-36 (48)
304 2elp_A Zinc finger protein 406 98.4 1.1E-07 3.8E-12 53.6 1.9 32 9-42 4-36 (37)
305 2eoz_A Zinc finger protein 473 98.4 1.9E-07 6.4E-12 55.6 2.9 31 81-111 15-45 (46)
306 1x3c_A Zinc finger protein 292 98.4 2.6E-07 8.8E-12 59.6 3.7 29 82-110 33-62 (73)
307 2ept_A Zinc finger protein 32; 98.4 1.2E-07 4.1E-12 54.9 2.0 29 81-109 13-41 (41)
308 2kvh_A Zinc finger and BTB dom 98.4 2.1E-07 7.1E-12 48.5 2.7 27 12-40 1-27 (27)
309 2emz_A ZFP-95, zinc finger pro 98.4 1.4E-07 4.8E-12 56.1 2.2 31 81-111 15-45 (46)
310 1rim_A E6APC2 peptide; E6-bind 98.4 2E-07 6.9E-12 51.3 2.7 28 81-108 5-32 (33)
311 2kvg_A Zinc finger and BTB dom 98.4 1.6E-07 5.4E-12 49.0 2.2 27 12-40 1-27 (27)
312 2eq1_A Zinc finger protein 347 98.4 1.8E-07 6E-12 55.6 2.6 31 81-111 15-45 (46)
313 2yts_A Zinc finger protein 484 98.4 1.6E-07 5.3E-12 55.8 2.3 31 81-111 15-45 (46)
314 2yrj_A Zinc finger protein 473 98.4 1.6E-07 5.6E-12 55.7 2.4 31 81-111 15-45 (46)
315 2eoj_A Zinc finger protein 268 98.4 1.5E-07 5.2E-12 55.3 2.2 30 81-110 15-44 (44)
316 2epv_A Zinc finger protein 268 98.4 1.9E-07 6.5E-12 55.0 2.5 30 81-110 15-44 (44)
317 1x6f_A Zinc finger protein 462 98.4 3.3E-08 1.1E-12 68.1 -1.0 41 9-51 20-61 (88)
318 2kvf_A Zinc finger and BTB dom 98.4 2.3E-07 7.7E-12 48.7 2.6 28 12-41 1-28 (28)
319 2emb_A Zinc finger protein 473 98.3 1.7E-07 5.9E-12 55.1 2.3 30 81-110 15-44 (44)
320 2epr_A POZ-, at HOOK-, and zin 98.3 2.4E-07 8.2E-12 55.7 2.9 30 81-110 15-44 (48)
321 2ytt_A Zinc finger protein 473 98.3 1.9E-07 6.6E-12 55.5 2.4 31 81-111 15-45 (46)
322 1yui_A GAGA-factor; complex (D 98.3 2.3E-07 7.9E-12 57.3 2.8 39 23-63 5-44 (54)
323 2eq3_A Zinc finger protein 347 98.3 2.1E-07 7.1E-12 55.3 2.5 31 81-111 15-45 (46)
324 2en2_A B-cell lymphoma 6 prote 98.3 1.8E-07 6.1E-12 54.4 2.0 29 81-109 14-42 (42)
325 2en3_A ZFP-95, zinc finger pro 98.3 1.8E-07 6.3E-12 55.5 2.0 31 81-111 15-45 (46)
326 1bhi_A CRE-BP1, ATF-2; CRE bin 98.3 2.3E-07 7.7E-12 52.7 2.2 33 10-44 2-36 (38)
327 1ard_A Yeast transcription fac 98.3 3.4E-07 1.2E-11 48.3 2.8 28 13-42 1-28 (29)
328 2epq_A POZ-, at HOOK-, and zin 98.3 2.7E-07 9.3E-12 54.5 2.7 31 81-111 13-43 (45)
329 1rik_A E6APC1 peptide; E6-bind 98.3 2.4E-07 8.1E-12 49.0 2.1 29 13-43 1-29 (29)
330 2ep0_A Zinc finger protein 28 98.3 1.5E-07 5.1E-12 56.0 1.3 31 81-111 15-45 (46)
331 1zfd_A SWI5; DNA binding motif 98.3 3.8E-07 1.3E-11 49.5 2.9 30 12-43 1-32 (32)
332 1va1_A Transcription factor SP 98.3 2.6E-07 8.7E-12 52.2 2.2 32 10-43 4-37 (37)
333 2eon_A ZFP-95, zinc finger pro 98.3 2.3E-07 7.9E-12 55.2 1.7 31 81-111 15-45 (46)
334 2d9k_A FLN29 gene product; zin 98.3 2.1E-08 7.1E-13 66.9 -3.4 60 30-105 5-69 (75)
335 2eoy_A Zinc finger protein 473 98.3 2.9E-07 1E-11 54.7 2.1 30 81-110 15-45 (46)
336 1sp2_A SP1F2; zinc finger, tra 98.3 5.7E-07 1.9E-11 48.4 3.0 29 13-43 1-31 (31)
337 2ytb_A Zinc finger protein 32; 98.3 2.5E-07 8.7E-12 53.7 1.6 29 81-109 14-42 (42)
338 2kfq_A FP1; protein, de novo p 98.3 3.7E-08 1.3E-12 53.9 -2.1 30 13-44 1-30 (32)
339 1klr_A Zinc finger Y-chromosom 98.2 5E-07 1.7E-11 47.9 2.4 29 13-43 1-29 (30)
340 2m0f_A Zinc finger and BTB dom 98.2 3.8E-07 1.3E-11 48.0 1.8 29 13-43 1-29 (29)
341 2lvr_A Zinc finger and BTB dom 97.6 1.4E-07 4.7E-12 50.3 0.0 29 12-42 1-29 (30)
342 2eos_A B-cell lymphoma 6 prote 98.2 2.9E-07 9.8E-12 53.5 1.4 29 81-109 14-42 (42)
343 1njq_A Superman protein; zinc- 98.2 5.4E-07 1.8E-11 51.4 2.4 30 80-109 8-37 (39)
344 2lvt_A Zinc finger and BTB dom 97.5 1.6E-07 5.5E-12 49.7 0.0 28 13-42 1-28 (29)
345 1paa_A Yeast transcription fac 98.2 6.3E-07 2.2E-11 47.6 2.4 29 13-43 1-30 (30)
346 2m0e_A Zinc finger and BTB dom 98.2 4.1E-07 1.4E-11 47.9 1.6 28 13-42 1-28 (29)
347 1znf_A 31ST zinc finger from X 98.2 8.8E-07 3E-11 45.8 2.7 27 14-42 1-27 (27)
348 2d9k_A FLN29 gene product; zin 98.2 2E-07 6.8E-12 62.0 -0.5 50 9-63 12-62 (75)
349 2lvu_A Zinc finger and BTB dom 97.4 3.2E-07 1.1E-11 47.2 0.0 26 13-40 1-26 (26)
350 1fv5_A First zinc finger of U- 98.1 6.9E-07 2.3E-11 50.3 1.0 30 39-70 3-33 (36)
351 2elx_A Zinc finger protein 406 98.1 1.5E-06 5.2E-11 48.0 2.5 27 80-106 9-35 (35)
352 2ent_A Krueppel-like factor 15 98.1 8.6E-07 3E-11 53.0 1.3 29 83-111 19-47 (48)
353 2elo_A Zinc finger protein 406 98.1 2E-06 6.7E-11 48.2 2.5 26 81-106 12-37 (37)
354 1ncs_A Peptide M30F, transcrip 98.0 8.6E-07 2.9E-11 53.0 0.8 32 10-43 14-47 (47)
355 2kfq_A FP1; protein, de novo p 98.0 1.3E-07 4.5E-12 51.6 -2.8 27 81-107 5-31 (32)
356 1ard_A Yeast transcription fac 98.0 3.1E-06 1.1E-10 44.3 2.6 25 81-105 5-29 (29)
357 1srk_A Zinc finger protein ZFP 98.0 2.5E-06 8.5E-11 47.1 2.2 26 81-106 10-35 (35)
358 1klr_A Zinc finger Y-chromosom 98.0 3.2E-06 1.1E-10 44.6 2.6 27 80-106 4-30 (30)
359 1rik_A E6APC1 peptide; E6-bind 98.0 2.5E-06 8.6E-11 44.8 2.0 26 80-105 4-29 (29)
360 2m0f_A Zinc finger and BTB dom 98.0 3.5E-06 1.2E-10 44.1 2.1 26 80-105 4-29 (29)
361 2ab3_A ZNF29; zinc finger prot 98.0 3.9E-06 1.3E-10 43.9 2.3 27 13-41 1-29 (29)
362 1x6f_A Zinc finger protein 462 97.9 8.6E-07 2.9E-11 60.8 -0.7 46 81-127 28-73 (88)
363 1znf_A 31ST zinc finger from X 97.9 3.1E-06 1.1E-10 43.6 1.7 24 81-104 4-27 (27)
364 2m0e_A Zinc finger and BTB dom 97.9 4.5E-06 1.5E-10 43.6 2.3 25 81-105 5-29 (29)
365 2elr_A Zinc finger protein 406 97.9 5.5E-06 1.9E-10 45.9 2.6 25 81-105 12-36 (36)
366 2m0d_A Zinc finger and BTB dom 97.9 4.5E-06 1.5E-10 44.0 2.1 25 81-105 6-30 (30)
367 1bhi_A CRE-BP1, ATF-2; CRE bin 97.9 5E-06 1.7E-10 46.8 2.3 28 81-108 9-38 (38)
368 2lvt_A Zinc finger and BTB dom 97.1 1.7E-06 5.7E-11 45.6 0.0 25 81-105 5-29 (29)
369 2els_A Zinc finger protein 406 97.9 6.4E-06 2.2E-10 45.8 2.3 25 81-105 12-36 (36)
370 1sp2_A SP1F2; zinc finger, tra 97.9 6.2E-06 2.1E-10 44.1 2.0 24 82-105 8-31 (31)
371 2elt_A Zinc finger protein 406 97.9 7.2E-06 2.4E-10 45.5 2.3 25 81-105 12-36 (36)
372 1p7a_A BF3, BKLF, kruppel-like 97.8 3.4E-06 1.2E-10 47.2 0.8 23 81-103 14-36 (37)
373 2eln_A Zinc finger protein 406 97.8 8.2E-06 2.8E-10 46.4 2.4 24 81-104 12-37 (38)
374 2elv_A Zinc finger protein 406 97.8 5.9E-06 2E-10 45.9 1.7 25 81-105 12-36 (36)
375 2elq_A Zinc finger protein 406 97.8 9.2E-06 3.1E-10 45.1 2.3 25 81-105 12-36 (36)
376 2lvr_A Zinc finger and BTB dom 97.0 3E-06 1E-10 44.8 0.0 25 81-105 6-30 (30)
377 1zfd_A SWI5; DNA binding motif 97.8 1.1E-05 3.9E-10 43.3 2.4 25 81-105 6-32 (32)
378 2elp_A Zinc finger protein 406 97.8 1E-05 3.4E-10 45.2 2.0 25 81-105 12-37 (37)
379 2kvf_A Zinc finger and BTB dom 97.7 9.7E-06 3.3E-10 42.1 1.4 23 81-103 6-28 (28)
380 2kvh_A Zinc finger and BTB dom 97.7 1.3E-05 4.4E-10 41.3 1.8 23 80-102 5-27 (27)
381 1paa_A Yeast transcription fac 97.7 1E-05 3.5E-10 42.7 1.4 25 81-105 5-30 (30)
382 2kvg_A Zinc finger and BTB dom 97.7 1.1E-05 3.9E-10 41.6 1.2 22 81-102 6-27 (27)
383 1va1_A Transcription factor SP 97.6 2.2E-05 7.4E-10 43.9 2.1 25 81-105 11-37 (37)
384 2lvu_A Zinc finger and BTB dom 96.8 8.6E-06 2.9E-10 41.5 0.0 22 81-102 5-26 (26)
385 2epp_A POZ-, at HOOK-, and zin 97.5 3.9E-05 1.3E-09 49.3 2.5 26 81-106 16-41 (66)
386 2ab3_A ZNF29; zinc finger prot 97.5 4.2E-05 1.4E-09 39.7 1.8 23 81-103 5-29 (29)
387 3iuf_A Zinc finger protein UBI 97.4 4.1E-05 1.4E-09 45.7 1.6 26 81-106 10-36 (48)
388 2elm_A Zinc finger protein 406 97.4 6.3E-05 2.2E-09 41.9 1.9 24 81-104 12-36 (37)
389 1ncs_A Peptide M30F, transcrip 97.4 6.9E-05 2.4E-09 44.4 1.8 24 82-105 24-47 (47)
390 1zr9_A Zinc finger protein 593 96.8 0.0005 1.7E-08 49.6 1.9 31 6-36 42-72 (124)
391 4hec_A Putative uncharacterize 96.7 0.0027 9.3E-08 49.5 5.6 97 137-245 24-123 (190)
392 1zw8_A Zinc-responsive transcr 96.0 0.0071 2.4E-07 38.3 3.9 24 18-43 7-31 (64)
393 2kfn_A Klenow fragment of DNA 95.8 0.016 5.5E-07 53.6 6.8 93 136-259 27-123 (605)
394 1x9m_A DNA polymerase; DNA plo 95.8 0.0093 3.2E-07 56.1 5.1 84 137-259 1-95 (698)
395 2e72_A POGO transposable eleme 95.4 0.018 6E-07 33.5 3.5 24 13-36 11-34 (49)
396 1zw8_A Zinc-responsive transcr 95.2 0.01 3.5E-07 37.5 2.3 40 84-123 9-60 (64)
397 1zu1_A DSRBP-ZFA, RNA binding 95.2 0.013 4.5E-07 42.6 3.1 74 12-99 30-114 (127)
398 2e72_A POGO transposable eleme 93.8 0.048 1.6E-06 31.7 2.6 22 80-101 14-35 (49)
399 1zr9_A Zinc finger protein 593 93.4 0.016 5.6E-07 41.6 0.3 21 81-101 53-73 (124)
400 1qht_A Protein (DNA polymerase 91.6 0.37 1.3E-05 45.8 7.2 86 133-244 133-220 (775)
401 1s5j_A DNA polymerase I; repli 91.5 0.52 1.8E-05 45.2 8.1 95 132-244 187-288 (847)
402 3mjh_B Early endosome antigen 91.5 0.17 5.8E-06 27.4 2.7 28 14-42 5-32 (34)
403 1noy_A Protein (DNA polymerase 90.8 1.4 4.9E-05 38.1 9.6 101 133-244 104-224 (388)
404 4ayb_P DNA-directed RNA polyme 90.6 0.097 3.3E-06 30.2 1.3 20 67-86 4-31 (48)
405 1fu9_A U-shaped transcriptiona 89.9 0.36 1.2E-05 26.2 3.1 28 9-36 3-30 (36)
406 2jsp_A Transcriptional regulat 87.9 0.21 7.2E-06 33.3 1.6 25 81-108 24-48 (87)
407 3mjh_B Early endosome antigen 84.8 0.6 2.1E-05 25.2 2.1 22 81-102 8-29 (34)
408 3hcs_A TNF receptor-associated 84.5 0.44 1.5E-05 36.1 2.1 83 16-106 55-164 (170)
409 3qex_A DNA polymerase, GP43; d 84.4 2.6 9E-05 40.6 7.7 99 134-243 107-226 (903)
410 2gmg_A Hypothetical protein PF 83.7 0.47 1.6E-05 32.7 1.7 25 45-75 69-93 (105)
411 2a1r_A Poly(A)-specific ribonu 82.1 0.4 1.4E-05 42.2 1.1 31 227-259 280-329 (430)
412 3ikm_A DNA polymerase subunit 81.9 0.47 1.6E-05 46.0 1.5 30 227-256 193-226 (1172)
413 2yrk_A Zinc finger homeobox pr 81.5 0.97 3.3E-05 26.9 2.3 22 15-36 14-35 (55)
414 1zu1_A DSRBP-ZFA, RNA binding 81.2 1.2 4.2E-05 31.9 3.3 27 10-36 89-115 (127)
415 3iay_A DNA polymerase delta ca 81.1 1.8 6.3E-05 41.8 5.4 40 193-243 305-345 (919)
416 2elu_A Zinc finger protein 406 79.2 1.3 4.6E-05 23.2 2.1 21 81-101 12-32 (37)
417 2gmg_A Hypothetical protein PF 79.1 0.76 2.6E-05 31.7 1.4 25 64-88 65-94 (105)
418 3hcs_A TNF receptor-associated 78.9 0.76 2.6E-05 34.7 1.6 61 15-80 83-151 (170)
419 2djr_A Zinc finger BED domain- 78.7 1 3.5E-05 29.2 1.9 25 80-104 30-61 (76)
420 3saf_A Exosome component 10; e 78.3 2.6 8.9E-05 37.0 5.0 41 206-258 172-214 (428)
421 1vq8_Z 50S ribosomal protein L 76.7 0.68 2.3E-05 30.6 0.6 27 64-90 25-57 (83)
422 3jyw_9 60S ribosomal protein L 76.3 1.8 6E-05 27.7 2.5 26 65-90 25-56 (72)
423 3d45_A Poly(A)-specific ribonu 75.0 0.87 3E-05 41.0 1.1 32 227-260 275-325 (507)
424 2k5c_A Uncharacterized protein 73.6 0.54 1.8E-05 30.6 -0.5 18 45-63 10-27 (95)
425 1wjv_A Cell growth regulating 72.6 0.74 2.5E-05 29.9 -0.0 46 13-62 9-55 (79)
426 3k59_A POL II, DNA polymerase 72.1 5.7 0.0002 37.7 5.9 40 194-244 197-237 (786)
427 1ffk_W Ribosomal protein L37AE 70.6 2 6.9E-05 27.5 1.7 26 65-90 26-57 (73)
428 2gv9_A DNA polymerase; polymer 70.2 4.4 0.00015 40.4 4.8 39 195-244 395-434 (1193)
429 3cc2_Z 50S ribosomal protein L 70.1 1 3.4E-05 31.6 0.2 28 64-91 58-91 (116)
430 2jvx_A NF-kappa-B essential mo 69.8 3.1 0.00011 21.3 2.0 22 14-35 3-24 (28)
431 2yrk_A Zinc finger homeobox pr 69.5 1.8 6.1E-05 25.8 1.2 19 80-98 15-33 (55)
432 3j21_i 50S ribosomal protein L 68.9 2 6.8E-05 28.3 1.4 27 64-90 33-65 (83)
433 2k9h_A Glycoprotein; hantaviru 68.2 4.6 0.00016 24.0 2.7 44 15-62 4-48 (57)
434 1twf_L ABC10-alpha, DNA-direct 66.6 1.7 5.9E-05 27.6 0.8 21 66-86 28-53 (70)
435 2czr_A TBP-interacting protein 66.0 1.8 6E-05 32.8 0.8 25 14-41 154-178 (226)
436 3izc_m 60S ribosomal protein R 65.7 2.7 9.3E-05 28.2 1.6 27 64-90 34-66 (92)
437 3iz5_m 60S ribosomal protein L 65.5 2.6 9E-05 28.2 1.5 26 65-90 35-66 (92)
438 2lcq_A Putative toxin VAPC6; P 64.8 1.7 5.8E-05 32.7 0.5 23 66-88 132-158 (165)
439 2yuc_A TNF receptor-associated 64.1 6.1 0.00021 25.0 3.2 18 45-63 46-63 (76)
440 2i5o_A DNA polymerase ETA; zin 63.7 2.3 7.9E-05 23.6 0.8 25 11-36 6-30 (39)
441 2ct5_A Zinc finger BED domain 63.1 4 0.00014 26.1 2.0 24 81-104 32-58 (73)
442 6rxn_A Rubredoxin; electron tr 62.6 2.1 7.2E-05 24.8 0.5 10 45-54 6-15 (46)
443 2yqq_A Zinc finger HIT domain- 62.1 8.2 0.00028 23.3 3.1 37 67-104 13-49 (56)
444 3h0g_L DNA-directed RNA polyme 61.1 4.1 0.00014 25.3 1.7 22 66-87 21-47 (63)
445 2jsp_A Transcriptional regulat 60.4 4.6 0.00016 26.8 1.9 28 12-44 19-46 (87)
446 1vk0_A Hypothetical protein; h 59.7 4.1 0.00014 31.8 2.0 41 206-258 98-140 (206)
447 4a17_Y RPL37A, 60S ribosomal p 57.7 3.1 0.00011 28.4 0.8 27 64-90 34-66 (103)
448 1wir_A Protein arginine N-meth 57.0 12 0.0004 26.6 3.7 32 4-36 6-37 (121)
449 3ga8_A HTH-type transcriptiona 55.3 9.1 0.00031 24.6 2.8 17 81-97 39-55 (78)
450 2py5_A DNA polymerase; protein 51.2 5.3 0.00018 36.4 1.5 17 228-244 55-71 (575)
451 2jne_A Hypothetical protein YF 50.3 2.4 8.2E-05 28.6 -0.7 36 45-87 34-70 (101)
452 3sp4_A Aprataxin-like protein; 47.7 9.2 0.00031 29.8 2.1 22 80-101 171-193 (204)
453 2jrp_A Putative cytoplasmic pr 47.6 1.9 6.6E-05 28.2 -1.5 22 66-87 18-40 (81)
454 1vfy_A Phosphatidylinositol-3- 47.5 7.2 0.00025 24.8 1.3 25 45-76 13-37 (73)
455 3pv8_A DNA polymerase I; DNA p 47.4 6.3 0.00022 36.1 1.3 41 204-257 69-112 (592)
456 4rxn_A Rubredoxin; electron tr 47.2 5.1 0.00017 24.0 0.5 10 45-54 5-14 (54)
457 1yt3_A Ribonuclease D, RNAse D 46.4 11 0.00039 32.1 2.7 40 206-258 64-106 (375)
458 1gh9_A 8.3 kDa protein (gene M 44.4 5.7 0.00019 25.3 0.4 19 69-89 7-31 (71)
459 1pft_A TFIIB, PFTFIIBN; N-term 43.2 14 0.00049 21.3 2.1 10 81-90 27-36 (50)
460 1e8j_A Rubredoxin; iron-sulfur 43.1 8.5 0.00029 22.8 1.0 9 45-53 5-13 (52)
461 2yw8_A RUN and FYVE domain-con 42.2 9.7 0.00033 24.8 1.3 25 45-76 21-45 (82)
462 2e6m_A Werner syndrome ATP-dep 41.8 13 0.00045 28.6 2.3 38 206-256 86-127 (208)
463 3ttc_A HYPF, transcriptional r 41.4 1.7 5.8E-05 40.3 -3.4 31 45-76 69-99 (657)
464 2kdx_A HYPA, hydrogenase/ureas 41.4 7.3 0.00025 27.4 0.6 10 67-76 74-83 (119)
465 3vth_A Hydrogenase maturation 41.0 2.2 7.4E-05 40.4 -2.8 30 45-75 163-192 (761)
466 1joc_A EEA1, early endosomal a 37.7 11 0.00039 26.7 1.2 25 45-76 71-95 (125)
467 1z2q_A LM5-1; membrane protein 37.5 12 0.0004 24.5 1.2 25 45-76 23-47 (84)
468 2kn9_A Rubredoxin; metalloprot 37.3 7.4 0.00025 25.4 0.1 6 81-86 63-68 (81)
469 4g9i_A Hydrogenase maturation 37.1 2 6.7E-05 40.8 -3.8 30 45-75 158-187 (772)
470 3pwf_A Rubrerythrin; non heme 36.9 8.9 0.0003 28.9 0.5 19 67-85 139-160 (170)
471 1x4u_A Zinc finger, FYVE domai 35.8 13 0.00045 24.2 1.2 25 45-76 16-40 (84)
472 4dfk_A DNA polymerase I, therm 35.7 3.2 0.00011 37.6 -2.5 39 204-258 46-84 (540)
473 2apo_B Ribosome biogenesis pro 35.6 17 0.00059 22.2 1.6 22 68-89 8-29 (60)
474 2v3b_B Rubredoxin 2, rubredoxi 34.9 8.5 0.00029 23.1 0.1 9 45-53 5-13 (55)
475 1wfk_A Zinc finger, FYVE domai 34.6 14 0.00048 24.4 1.2 25 45-76 11-35 (88)
476 1y02_A CARP2, FYVE-ring finger 34.5 14 0.00049 26.0 1.2 25 45-76 21-45 (120)
477 1lko_A Rubrerythrin all-iron(I 33.7 8.7 0.0003 29.5 -0.0 21 66-86 155-179 (191)
478 2hbj_A Exosome complex exonucl 32.5 22 0.00074 30.9 2.3 40 206-258 149-191 (410)
479 3a43_A HYPD, hydrogenase nicke 32.5 10 0.00036 27.5 0.2 8 45-52 72-79 (139)
480 3t7l_A Zinc finger FYVE domain 32.3 16 0.00055 24.2 1.2 25 45-76 22-46 (90)
481 3sp4_A Aprataxin-like protein; 31.9 16 0.00055 28.4 1.2 19 45-63 171-190 (204)
482 1dx8_A Rubredoxin; electron tr 30.7 13 0.00044 23.5 0.4 10 45-54 9-18 (70)
483 3vk6_A E3 ubiquitin-protein li 30.7 50 0.0017 22.4 3.4 24 13-36 57-83 (101)
484 1s24_A Rubredoxin 2; electron 30.4 11 0.00036 25.1 -0.0 9 45-53 37-45 (87)
485 3o9x_A Uncharacterized HTH-typ 29.0 40 0.0014 23.6 2.9 17 81-97 39-55 (133)
486 1xkl_A SABP2, salicylic acid-b 28.6 56 0.0019 25.6 4.1 32 198-237 52-83 (273)
487 3c6x_A Hydroxynitrilase; atomi 28.0 47 0.0016 25.8 3.5 31 199-237 52-82 (257)
488 1x4s_A Protein FON, zinc finge 27.8 31 0.001 21.0 1.7 30 68-97 13-45 (59)
489 2odx_A Cytochrome C oxidase po 27.7 16 0.00056 23.7 0.5 14 12-25 54-67 (80)
490 1wir_A Protein arginine N-meth 27.5 31 0.0011 24.3 2.0 24 80-103 17-40 (121)
491 2k2d_A Ring finger and CHY zin 27.0 17 0.0006 23.5 0.6 8 17-24 1-8 (79)
492 2wfl_A Polyneuridine-aldehyde 26.6 58 0.002 25.3 3.8 42 188-237 48-89 (264)
493 1z60_A TFIIH basal transcripti 26.4 8.6 0.00029 23.4 -0.9 33 69-101 18-53 (59)
494 1dvp_A HRS, hepatocyte growth 25.8 23 0.00078 27.7 1.2 9 81-89 164-172 (220)
495 3sty_A Methylketone synthase 1 24.7 76 0.0026 24.1 4.2 42 188-237 50-91 (267)
496 3zyq_A Hepatocyte growth facto 24.5 26 0.00089 27.6 1.3 9 81-89 167-175 (226)
497 1yuz_A Nigerythrin; rubrythrin 24.3 20 0.00069 27.8 0.6 9 67-75 172-180 (202)
498 2aus_D NOP10, ribosome biogene 23.9 30 0.001 21.1 1.2 21 68-88 7-27 (60)
499 2yu4_A E3 SUMO-protein ligase 23.9 60 0.002 21.3 2.9 36 65-101 6-42 (94)
500 4ap4_A E3 ubiquitin ligase RNF 23.7 11 0.00039 26.3 -0.9 15 12-26 5-19 (133)
No 1
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.89 E-value=3.9e-24 Score=170.58 Aligned_cols=136 Identities=25% Similarity=0.426 Sum_probs=107.1
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCccccccc---
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRG--- 80 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~--- 80 (267)
.++++|.|+.|++.|.....|..|++. |.++++ .|+.|++.|.+...|..|+ .++|.|+.|++.|....
T Consensus 17 ~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 94 (190)
T 2i13_A 17 PGEKPYACPECGKSFSRSDHLAEHQRT--HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLR 94 (190)
T ss_dssp --------------CCSSHHHHHGGGC--C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred CCCCCCcCCCCccccCCHHHHHHHHHH--cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHH
Confidence 578999999999999999999999999 999888 9999999999999999998 57899999999998763
Q ss_pred -------------ccccccccCChhhHHHHHHHhcCCCCcc---ccccCcchhhhhhhccccccccccCCCceeeeeccc
Q 024455 81 -------------CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAIDEKRTCRGPKAVAMDCEM 144 (267)
Q Consensus 81 -------------C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~f~~~~~l~~H~~~~~~~r~~~~~~~~~~dcE~ 144 (267)
|+.|++.|.+.+.|..|+++|+++++|. |++.|.....|..|+..+.+. ..+.|+.
T Consensus 95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~--------~~~~C~~ 166 (190)
T 2i13_A 95 AHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE--------KPYKCPE 166 (190)
T ss_dssp HHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCC--------CCEECTT
T ss_pred HHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCC--------CCeECCC
Confidence 9999999999999999999999999997 899999999999999776542 3578999
Q ss_pred cCCcCCCCccc
Q 024455 145 VGGGSNGTLDL 155 (267)
Q Consensus 145 ~g~~~~~~~~~ 155 (267)
|+..+.....+
T Consensus 167 C~~~f~~~~~L 177 (190)
T 2i13_A 167 CGKSFSRRDAL 177 (190)
T ss_dssp TCCEESSHHHH
T ss_pred CCCccCCHHHH
Confidence 99987765544
No 2
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.87 E-value=5.2e-23 Score=164.01 Aligned_cols=118 Identities=25% Similarity=0.432 Sum_probs=106.6
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCccccccc---
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRG--- 80 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~--- 80 (267)
.++++|.|+.|++.|.+...|..|+++ |.++++ .|+.|++.|.+..+|..|+ .++|.|+.|++.|.+..
T Consensus 45 ~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 122 (190)
T 2i13_A 45 TGEKPYKCPECGKSFSDKKDLTRHQRT--HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122 (190)
T ss_dssp ---CCEECTTTCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHH
T ss_pred CCCCCccCCCcCchhCCHHHHHHHHHh--cCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHH
Confidence 478899999999999999999999999 988888 9999999999999999998 57899999999999863
Q ss_pred -------------ccccccccCChhhHHHHHHHhcCCCCcc---ccccCcchhhhhhhccccccc
Q 024455 81 -------------CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAIDEK 129 (267)
Q Consensus 81 -------------C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~f~~~~~l~~H~~~~~~~ 129 (267)
|+.|++.|.+.+.|..|+++|++++||. |++.|.....|..|++.+.+.
T Consensus 123 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 187 (190)
T 2i13_A 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGK 187 (190)
T ss_dssp HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC---
T ss_pred HHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCC
Confidence 9999999999999999999999999997 899999999999999776553
No 3
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.87 E-value=2.2e-22 Score=160.38 Aligned_cols=140 Identities=19% Similarity=0.277 Sum_probs=115.6
Q ss_pred CCCCCCCCCCCCCcccc--ccCccccCChHHHHHHHhHhcCCCCCC-Cc--ccchhhcCCHHHHHhhc-----CCCCCCC
Q 024455 1 MDTEAELPKRSTARHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KC--AVCQKLSKSFESLREHL-----TGPLSKA 70 (267)
Q Consensus 1 ~~~~~~~~~~~~k~~~C--~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C--~~C~~~f~~~~~l~~H~-----~~~~~C~ 70 (267)
|+.++.|. ++++|.| +.|++.|.+...|..|+++ |+++++ .| +.|++.|.+...|..|+ .++|.|+
T Consensus 1 ~~~~~~~~--~~~~~~C~~~~C~~~f~~~~~L~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~ 76 (190)
T 1tf6_A 1 MGEKALPV--VYKRYICSFADCGAAYNKNWKLQAHLCK--HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCD 76 (190)
T ss_dssp -----------CCCCBCSSTTTCCBCSSHHHHHHHHHH--HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECC
T ss_pred CccccccC--CCcceeCCCCCCcchhCCHHHHHHHHHh--cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCC
Confidence 45555554 8999999 7899999999999999999 999888 99 88999999999999998 4689999
Q ss_pred --cCCccccccc------------------c--cccccccCChhhHHHHHHHhcCCCCcc-----ccccCcchhhhhhhc
Q 024455 71 --HCSGIFSDRG------------------C--NLCMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKIS 123 (267)
Q Consensus 71 --~C~k~f~~~~------------------C--~~C~~~F~~~~~L~~H~~~h~~~~~~~-----C~~~f~~~~~l~~H~ 123 (267)
.|++.|.+.. | +.|++.|.+.+.|..|+++|++++||. |++.|.....|..|+
T Consensus 77 ~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~ 156 (190)
T 1tf6_A 77 SDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE 156 (190)
T ss_dssp SSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHH
T ss_pred CCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHH
Confidence 8999998652 8 899999999999999999999999995 788999999999999
Q ss_pred cccccccccCCCceeeeeccc---cCCcCCCCccc
Q 024455 124 GAIDEKRTCRGPKAVAMDCEM---VGGGSNGTLDL 155 (267)
Q Consensus 124 ~~~~~~r~~~~~~~~~~dcE~---~g~~~~~~~~~ 155 (267)
+.+.+ +.|+. |+..+.....+
T Consensus 157 ~~H~~-----------~~C~~~~~C~~~f~~~~~l 180 (190)
T 1tf6_A 157 KVHAG-----------YPCKKDDSCSFVGKTWTLY 180 (190)
T ss_dssp TSSCS-----------CCCCSTTTCCCCCSCHHHH
T ss_pred HHhCC-----------CcCCCCCcCCCccccHHHH
Confidence 76543 55777 88776655433
No 4
>1wlj_A Interferon stimulated gene 20KDA; exoribonuclease, hydrolase; HET: U5P; 1.90A {Homo sapiens} SCOP: c.55.3.5
Probab=99.85 E-value=5e-22 Score=158.35 Aligned_cols=111 Identities=35% Similarity=0.613 Sum_probs=98.0
Q ss_pred CceeeeeccccCCcCCCCccceeeEEEecCCCCeeEecccCCCCCccccccccccCCHHhhccCCCHHHHHHHHHHHHhc
Q 024455 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNN 214 (267)
Q Consensus 135 ~~~~~~dcE~~g~~~~~~~~~i~~v~vvd~~~~~~~~~~v~P~~~i~~~~~~~~GIt~~~l~~~~~~~~v~~~~~~~~~~ 214 (267)
..++++|+||+|.+... ..+++.+.+++.++..+++++|+|..+|+++.+++||||+++|+++|++++|+.+|.+|+
T Consensus 5 ~~~vviD~ETTGl~~~~-~~~iiei~~v~~~g~~i~~~lV~P~~~i~~~~~~i~GIt~~~l~~a~~~~~v~~~~~~~l-- 81 (189)
T 1wlj_A 5 REVVAMDCEMVGLGPHR-ESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLL-- 81 (189)
T ss_dssp -CEEEEEEEEEEETTTT-EEEEEEEEEECTTCCEEEEEEEECSSCEEECCHHHHCCCHHHHTTCEEHHHHHHHHHHHH--
T ss_pred CeEEEEEeECcCcCCCC-CceEEEEEEEeCCCCEEEeeEecCCCCCCccccCCCCCCHHHHcCCCCHHHHHHHHHHHH--
Confidence 46799999999986443 234456677777888889999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCCceEEEeccchhhhccccccCCCCceeccccccc
Q 024455 215 GESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRP 260 (267)
Q Consensus 215 ~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~~~~~~~~~dt~~~~~ 260 (267)
++.+|||||+.||+.||+..+|+..++||..+++
T Consensus 82 ------------~~~~lV~hn~~fD~~~L~~~~~~~~~idt~~~~~ 115 (189)
T 1wlj_A 82 ------------KGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRL 115 (189)
T ss_dssp ------------TTSEEEESSHHHHHHHTTCCCTTCEEEEGGGCHH
T ss_pred ------------CCCEEEECCcHHHHHHHHHhCCCCceechHhhhh
Confidence 7789999999999999999999989999997754
No 5
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.82 E-value=2.5e-20 Score=137.87 Aligned_cols=111 Identities=20% Similarity=0.287 Sum_probs=94.0
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhcCCCCCCCcCCccccccccccccccc
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIF 88 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~~~F 88 (267)
+++++|.|+.|++.|.....|..|+++ |.++++ .|+.|++.|.+...|..|+.....- .-.+ ...|+.|++.|
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~-~~~~---~~~C~~C~~~f 76 (124)
T 2dlq_A 3 SGSSGVECPTCHKKFLSKYYLKVHNRK--HTGEKPFECPKCGKCYFRKENLLEHEARNCMN-RSEQ---VFTCSVCQETF 76 (124)
T ss_dssp CCCSSCCCTTTCCCCSSHHHHHHHHHH--HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCC-SCCC---CEECSSSCCEE
T ss_pred CCCCCCCCCCCCCcCCCHHHHHHHHHh--CCCCCCeECCCCCchhcCHHHHHHHHhhhhcC-CCCC---CeECCCCCCcc
Confidence 688999999999999999999999999 998888 9999999999999999998210000 0000 11378899999
Q ss_pred CChhhHHHHHHHhcCCCCcc---ccccCcchhhhhhhcccc
Q 024455 89 DSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAI 126 (267)
Q Consensus 89 ~~~~~L~~H~~~h~~~~~~~---C~~~f~~~~~l~~H~~~~ 126 (267)
.....|..|+++|++++||. |++.|.....|+.|+...
T Consensus 77 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~ 117 (124)
T 2dlq_A 77 RRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL 117 (124)
T ss_dssp SSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHH
Confidence 99999999999999999997 899999999999999643
No 6
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.81 E-value=8.6e-21 Score=142.52 Aligned_cols=88 Identities=22% Similarity=0.326 Sum_probs=78.2
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc---CCCCCCCcCCcccccccccccc
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCM 85 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~~~~C~~C~ 85 (267)
.|+++|.|++|++.|.+.+.|..|+++ |++++| .|++||+.|.+.+.|..|+ ++..++ .|++||
T Consensus 18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~----------~C~~C~ 85 (133)
T 2lt7_A 18 DGRVYYICIVCKRSYVCLTSLRRHFNI--HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRY----------QCLACG 85 (133)
T ss_dssp TTEEEEEETTTCCEESCHHHHHHHHHH--HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCE----------EESSSC
T ss_pred CCCcCeECCCCCCCcCCHHHHHHHHHH--cCCCCCeeCCccCeecccccchhhhccccCCCccc----------cCCCCC
Confidence 589999999999999999999999999 999999 9999999999999999999 332222 377888
Q ss_pred cccCChhhHHHHHHHhcCCCCccc
Q 024455 86 NIFDSPSSLIKHKEACSLSAPVPF 109 (267)
Q Consensus 86 ~~F~~~~~L~~H~~~h~~~~~~~C 109 (267)
+.|.+.+.|..|+++|++++|+.|
T Consensus 86 k~F~~~~~L~~H~~~hh~~~p~~~ 109 (133)
T 2lt7_A 86 KSFINYQFMSSHIKSVHSQDPSGD 109 (133)
T ss_dssp CEESSHHHHHHHHHHHTCCCTTSS
T ss_pred CCcCCHHHHHHHhHHhcCCCCCCC
Confidence 999999999999999999887643
No 7
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.80 E-value=8.3e-20 Score=145.38 Aligned_cols=116 Identities=18% Similarity=0.274 Sum_probs=104.7
Q ss_pred CCCCcccc--ccCccccCChHHHHHHHhHhcCCCCCC-Ccc--cchhhcCCHHHHHhhc-------CCCCCC--CcCCcc
Q 024455 10 RSTARHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-------TGPLSK--AHCSGI 75 (267)
Q Consensus 10 ~~~k~~~C--~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-------~~~~~C--~~C~k~ 75 (267)
+++++|.| +.|++.|.+...|..|+++ |.++++ .|+ .|++.|.+...|..|+ ..+|.| +.|++.
T Consensus 38 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~ 115 (190)
T 1tf6_A 38 TGEKPFPCKEEGCEKGFTSLHHLTRHSLT--HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKA 115 (190)
T ss_dssp HCCCSSCCSSTTCCCCCSSHHHHHHHHTT--TTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEE
T ss_pred CCCCCccCCCCCCChhhCCHHHHHHHHHH--ccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccc
Confidence 36889999 8999999999999999999 999998 999 8999999999999998 247899 999999
Q ss_pred ccccc----------------ccc--cccccCChhhHHHHHHHhcCCCCcc---ccccCcchhhhhhhccccc
Q 024455 76 FSDRG----------------CNL--CMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAID 127 (267)
Q Consensus 76 f~~~~----------------C~~--C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~f~~~~~l~~H~~~~~ 127 (267)
|.+.. |+. |++.|.+.+.|..|+++|++-+... |++.|.....|..|++.+.
T Consensus 116 f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~~C~~~~~C~~~f~~~~~l~~H~~~h~ 188 (190)
T 1tf6_A 116 FKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188 (190)
T ss_dssp CSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCSCCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCCCcCCCCCcCCCccccHHHHHHHHHhhc
Confidence 99863 988 9999999999999999999844444 9999999999999997654
No 8
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.79 E-value=6.5e-20 Score=134.67 Aligned_cols=102 Identities=20% Similarity=0.455 Sum_probs=91.8
Q ss_pred CCCCcccccc--CccccCChHHHHHHHhHhcCCCCCC-Ccc--cchhhcCCHHHHHhhc-----CCCCCCCcCCcccccc
Q 024455 10 RSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDR 79 (267)
Q Consensus 10 ~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~ 79 (267)
+++++|.|+. |++.|.+...|..|+++ |.++++ .|+ .|++.|.+...|..|+ .++|.
T Consensus 2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~----------- 68 (119)
T 2jp9_A 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRK--HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQ----------- 68 (119)
T ss_dssp CSSCCBCCCSTTSCCCBSCHHHHHHHHHH--HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEE-----------
T ss_pred CCCeeeeCCCCCCcchhCCHHHHHHHHHh--hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCcc-----------
Confidence 5889999987 99999999999999999 998888 999 7999999999999998 34444
Q ss_pred cccccccccCChhhHHHHHHHhcCCCCcc-----ccccCcchhhhhhhccc
Q 024455 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKISGA 125 (267)
Q Consensus 80 ~C~~C~~~F~~~~~L~~H~~~h~~~~~~~-----C~~~f~~~~~l~~H~~~ 125 (267)
|+.|++.|...+.|..|+++|+++++|. |++.|.....|..|++.
T Consensus 69 -C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~ 118 (119)
T 2jp9_A 69 -CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118 (119)
T ss_dssp -CTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred -CCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence 6778889999999999999999999885 68999999999999854
No 9
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.79 E-value=1.6e-19 Score=138.91 Aligned_cols=111 Identities=22% Similarity=0.370 Sum_probs=74.8
Q ss_pred CCccccccCccccCChHHHHHHHh---HhcCCCCCC-Cccc-----chhhcCCHHHHHhhc-----CCCCCCCc--CCcc
Q 024455 12 TARHKCVACYKQFKRKDHLIEHMK---ISYHSVHQP-KCAV-----CQKLSKSFESLREHL-----TGPLSKAH--CSGI 75 (267)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~---~~~H~~~~~-~C~~-----C~~~f~~~~~l~~H~-----~~~~~C~~--C~k~ 75 (267)
|.+|+|+.|++.|.+...|..|++ + |.++++ .|+. |++.|.+...|..|+ .++|.|+. |++.
T Consensus 1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~--h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~ 78 (155)
T 2gli_A 1 ETDCRWDGCSQEFDSQEQLVHHINSEHI--HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKS 78 (155)
T ss_dssp CCBCCBTTCCCBCSCHHHHHHHHHHHTS--SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCC
T ss_pred CCcCCcCCCccccCCHHHHHHHHHhhcc--CCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCc
Confidence 568999999999999999999998 5 888777 7664 459999999999998 46788753 5555
Q ss_pred ccccc----------------ccc--cccccCChhhHHHHH-HHhcCCCCcc-----ccccCcchhhhhhhcc
Q 024455 76 FSDRG----------------CNL--CMNIFDSPSSLIKHK-EACSLSAPVP-----FEKTLSNAESQKKISG 124 (267)
Q Consensus 76 f~~~~----------------C~~--C~~~F~~~~~L~~H~-~~h~~~~~~~-----C~~~f~~~~~l~~H~~ 124 (267)
|.+.. |+. |++.|.+.+.|..|+ ++|+++++|. |++.|.....|..|+.
T Consensus 79 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~ 151 (155)
T 2gli_A 79 YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151 (155)
T ss_dssp CSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHH
Confidence 54431 444 555555555555554 4454444442 3444555555555543
No 10
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=99.77 E-value=3.5e-19 Score=131.79 Aligned_cols=105 Identities=19% Similarity=0.278 Sum_probs=89.0
Q ss_pred CCCccccc--cCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCccccccccc
Q 024455 11 STARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (267)
Q Consensus 11 ~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~ 82 (267)
++++|.|+ .|++.|.+...|..|+++ | +.++ .|+.|++.|.+...|..|+ .++|.|. ++
T Consensus 2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~----------~~ 68 (124)
T 1ubd_C 2 EPRTIACPHKGCTKMFRDNSAMRKHLHT--H-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT----------FE 68 (124)
T ss_dssp ---CEECCSTTCCCEESSHHHHHHHHGG--G-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECC----------ST
T ss_pred CCCcccCCCCCCcCccCCHHHHHHHHHH--c-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCC----------CC
Confidence 46799999 899999999999999999 8 6677 9999999999999999998 3345542 23
Q ss_pred ccccccCChhhHHHHHHHhcCCCCcc-----ccccCcchhhhhhhcccccc
Q 024455 83 LCMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKISGAIDE 128 (267)
Q Consensus 83 ~C~~~F~~~~~L~~H~~~h~~~~~~~-----C~~~f~~~~~l~~H~~~~~~ 128 (267)
.|++.|...+.|..|+++|+++++|. |++.|.....|..|+..+.+
T Consensus 69 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~ 119 (124)
T 1ubd_C 69 GCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119 (124)
T ss_dssp TCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred CCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence 48999999999999999999999885 68899999999999976654
No 11
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=99.75 E-value=3.5e-18 Score=122.88 Aligned_cols=88 Identities=24% Similarity=0.520 Sum_probs=78.8
Q ss_pred CCCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccc
Q 024455 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGC 81 (267)
Q Consensus 8 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C 81 (267)
+..++++|.|+.|++.|.....|..|+++ |.++++ .|..|++.|.+...|..|+ .++|. |
T Consensus 11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C 76 (106)
T 2ee8_A 11 PSKTKKEFICKFCGRHFTKSYNLLIHERT--HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK------------C 76 (106)
T ss_dssp CCCCCCCCBCSSSCCBCSSHHHHHHHHHH--HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTS------------C
T ss_pred CcCCCcCeECCCCCCccCCHHHHHHHHHH--cCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeE------------C
Confidence 34678999999999999999999999999 998888 9999999999999999998 23444 6
Q ss_pred cccccccCChhhHHHHHHHhcCCCCccc
Q 024455 82 NLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (267)
Q Consensus 82 ~~C~~~F~~~~~L~~H~~~h~~~~~~~C 109 (267)
++|++.|.....|..|+++|+++++|.+
T Consensus 77 ~~C~~~f~~~~~L~~H~~~H~~~~~~~~ 104 (106)
T 2ee8_A 77 QECGKGFCQSRTLAVHKTLHMQTSSPTA 104 (106)
T ss_dssp SSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred CCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence 7788999999999999999999998763
No 12
>2p1j_A POLIII, DNA polymerase III POLC-type; structural genomics, exonuclease, PSI-2, protein structure initiative; HET: DNA; 2.50A {Thermotoga maritima MSB8}
Probab=99.75 E-value=7.5e-19 Score=139.56 Aligned_cols=112 Identities=22% Similarity=0.277 Sum_probs=94.6
Q ss_pred CCceeeeeccccCCcC-CCCccceeeEEEecCCCCeeEecccCCCCCccccccccccCCHHhhccCCCHHHHHHHHHHHH
Q 024455 134 GPKAVAMDCEMVGGGS-NGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEIL 212 (267)
Q Consensus 134 ~~~~~~~dcE~~g~~~-~~~~~~i~~v~vvd~~~~~~~~~~v~P~~~i~~~~~~~~GIt~~~l~~~~~~~~v~~~~~~~~ 212 (267)
...++++|+||+|.+. .+++++++.+.+.++.....|+.+|+|..+++++.+++||||++++++++++++|+++|.+++
T Consensus 11 ~~~~v~iD~ETTGl~~~~~~IieIg~v~~~~g~i~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~~~~~~~~v~~~~~~~l 90 (186)
T 2p1j_A 11 DATFVVLDFETTGLDPQVDEIIEIGAVKIQGGQIVDEYHTLIKPSREISRKSSEITGITQEMLENKRSIEEVLPEFLGFL 90 (186)
T ss_dssp --CEEEEEEEESCSCTTTCCEEEEEEEEEETTEEEEEEEEECBCSSCCCHHHHHHHCCCHHHHTTCCBHHHHHHHHHHHS
T ss_pred CCCEEEEEEECCCCCCCCCeEEEEEEEEEECCEEEEEEEEEECcCCCCCHHHhhhcCCCHHHHhcCCCHHHHHHHHHHHH
Confidence 4568999999999874 467888888888755444459999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcccccCCCceEEEeccchhhhccccc-------cCCCCceecccccc
Q 024455 213 NNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM-------NYPDHMLRDTAKYR 259 (267)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~-------~~~~~~~~dt~~~~ 259 (267)
++.+|||||+.||+.||+. ..|...++||..+.
T Consensus 91 --------------~~~~lv~hn~~fD~~~L~~~~~~~g~~~~~~~~iDt~~l~ 130 (186)
T 2p1j_A 91 --------------EDSIIVAHNANFDYRFLRLWIKKVMGLDWERPYIDTLALA 130 (186)
T ss_dssp --------------SSCEEEETTHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHH
T ss_pred --------------CCCEEEEECcHHHHHHHHHHHHHcCCCCCCCCEEeHHHHH
Confidence 7789999999999999963 34456789987443
No 13
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.75 E-value=1.3e-18 Score=133.82 Aligned_cols=108 Identities=19% Similarity=0.296 Sum_probs=90.0
Q ss_pred CCCccccccCccccCChHHHHHHHhHhcCCCCC---------CCcccchhhcCCHHHHHhhc-----CCCCCCCcCCccc
Q 024455 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQ---------PKCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIF 76 (267)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~---------~~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f 76 (267)
.+.+|.|+.|++.|.+...|..|++.+ |.+.. ..|..|++.|.+...|..|+ .++|.|..
T Consensus 22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~-H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----- 95 (155)
T 2rpc_A 22 AQLSRPKKSCDRTFSTMHELVTHVTME-HVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPF----- 95 (155)
T ss_dssp TCCSSSCCCCCCCBSSHHHHHHHHHTT-TSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSC-----
T ss_pred hhcccccccCCcccCCHHHHHHHHHhh-cCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCc-----
Confidence 567899999999999999999999874 76654 37999999999999999998 34565421
Q ss_pred ccccccccccccCChhhHHHHHHHhcCCCCcc-----ccccCcchhhhhhhccccccc
Q 024455 77 SDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKISGAIDEK 129 (267)
Q Consensus 77 ~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~-----C~~~f~~~~~l~~H~~~~~~~ 129 (267)
+.|++.|.....|..|+++|+++++|. |++.|.....|..|++.+.+.
T Consensus 96 -----~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 148 (155)
T 2rpc_A 96 -----PGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148 (155)
T ss_dssp -----TTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred -----CCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 228888899999999999999999885 778999999999999766543
No 14
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.73 E-value=5.2e-18 Score=119.68 Aligned_cols=86 Identities=33% Similarity=0.571 Sum_probs=76.9
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCccccccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~ 82 (267)
..++++|.|+.|++.|.+...|..|++. |.++++ .|+.|++.|.+...|..|+ .++|. |+
T Consensus 3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~ 68 (96)
T 2dmd_A 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRC--HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK------------CQ 68 (96)
T ss_dssp CCCCCCCCBTTTTBCCCCHHHHHHHGGG--CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEE------------CS
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHHHh--cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCcc------------CC
Confidence 4688999999999999999999999999 999888 9999999999999999998 23343 77
Q ss_pred ccccccCChhhHHHHHHHhcCCCCcc
Q 024455 83 LCMNIFDSPSSLIKHKEACSLSAPVP 108 (267)
Q Consensus 83 ~C~~~F~~~~~L~~H~~~h~~~~~~~ 108 (267)
.|++.|...+.|..|+++|+++++..
T Consensus 69 ~C~~~f~~~~~l~~H~~~h~~~~~p~ 94 (96)
T 2dmd_A 69 ICPYASRNSSQLTVHLRSHTGDSGPS 94 (96)
T ss_dssp SSSCEESSHHHHHHHHTTCCSCCCCC
T ss_pred CCCCccCCHHHHHHHHHHhcCCCCCC
Confidence 78899999999999999999987643
No 15
>2gui_A DNA polymerase III epsilon subunit; DNA polymerase proofreading domain, transferase; HET: DNA U5P; 1.60A {Escherichia coli} SCOP: c.55.3.5 PDB: 1j54_A* 1j53_A* 2ido_A* 2xy8_A*
Probab=99.71 E-value=9.3e-18 Score=134.15 Aligned_cols=109 Identities=20% Similarity=0.343 Sum_probs=92.3
Q ss_pred CceeeeeccccCCcC------CCCccceeeEEEecCCCC-eeEecccCCCCCccccccccccCCHHhhccCCCHHHHHHH
Q 024455 135 PKAVAMDCEMVGGGS------NGTLDLCARVCLVDEDEN-VIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDK 207 (267)
Q Consensus 135 ~~~~~~dcE~~g~~~------~~~~~~i~~v~vvd~~~~-~~~~~~v~P~~~i~~~~~~~~GIt~~~l~~~~~~~~v~~~ 207 (267)
..++++|+|++|... ..++++++.|.+.++... ..|+.+|+|..+++++.+++||||+++|++++++++|+.+
T Consensus 9 ~~~vviD~ETTGl~~~~~~~~~~~Iieig~v~~~~~~~~~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~~~~~~~~v~~~ 88 (194)
T 2gui_A 9 TRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADE 88 (194)
T ss_dssp CEEEEEEEEESCCCSSSSTTTTCCEEEEEEEEEETTEECSCCEEEECCCSSCCCHHHHHHHCCCHHHHTTSCCHHHHHHH
T ss_pred CCEEEEEeeCCCCCCcccCCCCCEEEEEEEEEEECCeEeccEEEEEECcCCcCCHHHHHhhCcCHHHHhCCCCHHHHHHH
Confidence 357899999999876 367888888888754322 3589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcccccCCCceEEEeccchhhhccccc-------cCCC----Cceecccc
Q 024455 208 ILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM-------NYPD----HMLRDTAK 257 (267)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~-------~~~~----~~~~dt~~ 257 (267)
|.+++ ++.+|||||+.||+.||+. .+|. ..++||..
T Consensus 89 ~~~~l--------------~~~~lv~hn~~fD~~~L~~~~~~~g~~~p~~~~~~~~iDt~~ 135 (194)
T 2gui_A 89 FMDYI--------------RGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLA 135 (194)
T ss_dssp HHHHH--------------TTSEEEETTHHHHHHHHHHHHHHTCSCCCCGGGTSEEEEHHH
T ss_pred HHHHH--------------CCCeEEEEchHHhHHHHHHHHHHcCCCCccccccCceeeHHH
Confidence 99999 7789999999999999963 3332 47889863
No 16
>2igi_A Oligoribonuclease; RNAse, exoribonuclease, exonuclease, hydrolase, mRNA decay; 1.70A {Escherichia coli} SCOP: c.55.3.5 PDB: 1yta_A 1j9a_A
Probab=99.71 E-value=3.8e-18 Score=134.76 Aligned_cols=111 Identities=19% Similarity=0.161 Sum_probs=85.8
Q ss_pred ceeeeeccccCCcCC-CCccceeeEEEecCCCCee---EecccCCCCCcccc----c---cccccCCHHhhccCCCHHHH
Q 024455 136 KAVAMDCEMVGGGSN-GTLDLCARVCLVDEDENVI---FHTYVQPQLPVTNY----R---YEVTGLTEEDIKNAMPLKEV 204 (267)
Q Consensus 136 ~~~~~dcE~~g~~~~-~~~~~i~~v~vvd~~~~~~---~~~~v~P~~~i~~~----~---~~~~GIt~~~l~~~~~~~~v 204 (267)
.++++|+||+|.+.. +++++++.| ++++++..+ ++.+|+|..++++. . +.+||||+++++++|++++|
T Consensus 6 ~~v~iD~ETTGl~~~~~~IieIg~v-~~~~~~~~~~~~~~~lv~P~~~i~~~i~~~~~~~~~itGIt~~~l~~~~~~~~v 84 (180)
T 2igi_A 6 NLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREA 84 (180)
T ss_dssp CEEEEEEEESSSCTTTCCEEEEEEE-EECTTCCEEEEEEEEECCCCHHHHTTCCHHHHHHHHHTTHHHHHHHCCCCHHHH
T ss_pred cEEEEEeeCCCCCCCCCceEEEEEE-EEcCCCcEecCCcceEECCCHHHhhcCCHHHHHHHHHcCCCHHHHhcCCCHHHH
Confidence 579999999998754 678888888 556665543 89999998876554 3 55699999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccCCCceEEEeccchhhhccccccCC------CCceecc
Q 024455 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP------DHMLRDT 255 (267)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~~~~------~~~~~dt 255 (267)
+.+|++|+++.. + +++.+|||||+.||+.||+..++ ...++|+
T Consensus 85 ~~~~~~~l~~~~------~--~~~~~lv~hn~~fD~~fL~~~~~~~~~~~~~~~~d~ 133 (180)
T 2igi_A 85 ELATLEFLKQWV------P--AGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDV 133 (180)
T ss_dssp HHHHHHHHTTTS------C--TTTSCEEESSHHHHHHHHHHHCHHHHHHSCSCEEET
T ss_pred HHHHHHHHHHhC------C--CCCceEEecCHHHHHHHHHHHHHHhccCCCcceeeH
Confidence 999999993200 0 01369999999999999986543 2356783
No 17
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=99.70 E-value=7.7e-18 Score=117.30 Aligned_cols=82 Identities=21% Similarity=0.543 Sum_probs=70.4
Q ss_pred CCCccccc--cCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCccccccccc
Q 024455 11 STARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (267)
Q Consensus 11 ~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~ 82 (267)
|+++|.|+ .|++.|.....|..|+++ |.++++ .|..|++.|.+...|..|+ .++|. |+
T Consensus 1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~ 66 (90)
T 1a1h_A 1 MERPYACPVESCDRRFSQSGSLTRHIRI--HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA------------CD 66 (90)
T ss_dssp --CCEECCSSSCCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE------------CT
T ss_pred CCCceECCCCCCCCccCCHHHHHHHHHH--hCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCcc------------CC
Confidence 57899998 699999999999999999 998888 9999999999999999998 33444 67
Q ss_pred ccccccCChhhHHHHHHHhcCCCC
Q 024455 83 LCMNIFDSPSSLIKHKEACSLSAP 106 (267)
Q Consensus 83 ~C~~~F~~~~~L~~H~~~h~~~~~ 106 (267)
.|++.|...+.|..|+++|+++++
T Consensus 67 ~C~~~f~~~~~l~~H~~~H~~~k~ 90 (90)
T 1a1h_A 67 ICGRKFARSDERKRHTKIHLRQKD 90 (90)
T ss_dssp TTCCEESSHHHHHHHHGGGGC---
T ss_pred CCCchhCCHHHHHHHHHHhcccCC
Confidence 788899999999999999998763
No 18
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.67 E-value=9.8e-17 Score=115.58 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=77.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc--CCCCCCCcCCcccccccccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL--TGPLSKAHCSGIFSDRGCNLCM 85 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~--~~~~~C~~C~k~f~~~~C~~C~ 85 (267)
.+++++|.|+.|++.|.....|..|+++ |. ++ .|.+|++.|.....|..|+ .+..+. .|+.|+
T Consensus 11 h~~~~~~~C~~C~~~f~~~~~l~~H~~~--H~--~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~----------~C~~C~ 76 (107)
T 1wjp_A 11 VENKEVYQCRLCNAKLSSLLEQGSHERL--CR--NAAVCPYCSLRFFSPELKQEHESKCEYKKL----------TCLECM 76 (107)
T ss_dssp CCCCCCCBCTTTCCBCSSHHHHHHHHHH--HH--HSBCCTTTCCCBSSHHHHHHHHHHCSTGGG----------EEGGGT
T ss_pred cCCCcCeECCCCCCccCCHHHHHHHHHH--CC--CCccCCCCCCccCCHHHHHHHHHcCCCCCc----------cCcccc
Confidence 4689999999999999999999999999 84 56 9999999999999999998 222111 388899
Q ss_pred cccCChhhHHHHHH-HhcCCCCccccc
Q 024455 86 NIFDSPSSLIKHKE-ACSLSAPVPFEK 111 (267)
Q Consensus 86 ~~F~~~~~L~~H~~-~h~~~~~~~C~~ 111 (267)
+.|.....|..|++ +|+++++|+|..
T Consensus 77 ~~f~~~~~L~~H~~~~H~~~~~~~~~~ 103 (107)
T 1wjp_A 77 RTFKSSFSIWRHQVEVHNQNNMAPTSG 103 (107)
T ss_dssp EECSSHHHHHHHHHHTSCCCCCCCCCC
T ss_pred chhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999999999997 899999988653
No 19
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.66 E-value=1.3e-16 Score=112.19 Aligned_cols=82 Identities=28% Similarity=0.447 Sum_probs=72.7
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc---C----CCCCCCcCCccccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---T----GPLSKAHCSGIFSDRG 80 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~----~~~~C~~C~k~f~~~~ 80 (267)
.+++++|.|+.|++.|.+...|..|+++ |.++++ .|+.|++.|.+...|..|+ . ++|.
T Consensus 2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~------------ 67 (95)
T 2yt9_A 2 SSGSSGVACEICGKIFRDVYHLNRHKLS--HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI------------ 67 (95)
T ss_dssp CCCCSCEECSSSCCEESSSHHHHHHHHH--SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBC------------
T ss_pred CCCCCCeECCCCCCccCChHHHHHHHHh--cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceE------------
Confidence 3689999999999999999999999999 999998 9999999999999999998 2 3444
Q ss_pred ccccccccCChhhHHHHHH-HhcCC
Q 024455 81 CNLCMNIFDSPSSLIKHKE-ACSLS 104 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~-~h~~~ 104 (267)
|+.|++.|...+.|..|++ +|.++
T Consensus 68 C~~C~~~f~~~~~L~~H~~~~H~~~ 92 (95)
T 2yt9_A 68 CQSCGKGFSRPDHLNGHIKQVHSGP 92 (95)
T ss_dssp CSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred CCCccchhCCHHHHHHHHHHhcCCC
Confidence 6778889999999999986 67654
No 20
>1w0h_A 3'-5' exonuclease ERI1; nuclease domain, hydrolase; HET: AMP; 1.59A {Homo sapiens} SCOP: c.55.3.5
Probab=99.65 E-value=5.3e-17 Score=130.75 Aligned_cols=119 Identities=18% Similarity=0.233 Sum_probs=93.3
Q ss_pred CCceeeeeccccCCcC-----CCCccceeeEEEecCCCC--eeEecccCCCC--CccccccccccCCHHhhccCCCHHHH
Q 024455 134 GPKAVAMDCEMVGGGS-----NGTLDLCARVCLVDEDEN--VIFHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKEV 204 (267)
Q Consensus 134 ~~~~~~~dcE~~g~~~-----~~~~~~i~~v~vvd~~~~--~~~~~~v~P~~--~i~~~~~~~~GIt~~~l~~~~~~~~v 204 (267)
...++++|+|++|... ..++++++.|.+...++. ..|+.+|+|.. +++++.+++||||+++|++++++++|
T Consensus 9 ~~~~vviD~ETTGl~~~~~~~~~~Iieigav~~~~~~g~i~~~f~~lv~P~~~~~i~~~~~~i~GIt~~~l~~~~~~~~v 88 (204)
T 1w0h_A 9 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQV 88 (204)
T ss_dssp SSEEEECCCEECCCTTCCTTSCCCEEEEEEEEEETTTCSEEEEEEEEBCCSSSCSCCHHHHHHHCCCHHHHHTSBCHHHH
T ss_pred cCEEEEEEEecCCcCCCCCCCCCcEEEEEEEEEECCCCEEeeeeeeEECCCCCCccCHHHHHHhCCCHHHHhCCCCHHHH
Confidence 3457999999999863 467888888877532344 34999999998 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccCCCceEEEeccchhhhc-ccc-------ccCCCC--ceecccccc
Q 024455 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLR-------MNYPDH--MLRDTAKYR 259 (267)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~-~l~-------~~~~~~--~~~dt~~~~ 259 (267)
+.+|.+|+.+.. ..+.+.+|||||+.||+. ||+ +..|.. .++||..++
T Consensus 89 ~~~~~~~l~~~~-------~~~~~~~lv~hn~~fD~~~~L~~~~~~~~~~~p~~~~~~~dt~~l~ 146 (204)
T 1w0h_A 89 LKKVIDWMKLKE-------LGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSY 146 (204)
T ss_dssp HHHHHHHHHHTT-------BTTTBCEEEEESSTTTTHHHHHHHHHHHTCCCCGGGSEEEEHHHHH
T ss_pred HHHHHHHHHhcC-------CCCCCcEEEEEECcchHHHHHHHHHHHhCCCCcccccceEEHHHHH
Confidence 999999995311 001235799999999996 995 445654 789997543
No 21
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=99.65 E-value=5.9e-17 Score=110.68 Aligned_cols=76 Identities=32% Similarity=0.605 Sum_probs=68.4
Q ss_pred ccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccc
Q 024455 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNI 87 (267)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~ 87 (267)
||.|+.|++.|.....|..|+++ |.++++ .|+.|++.|.+...|..|+ .++|. |+.|++.
T Consensus 1 ~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~ 66 (82)
T 2kmk_A 1 SFDCKICGKSFKRSSTLSTHLLI--HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK------------CQVCGKA 66 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH--HHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEE------------CTTTSCE
T ss_pred CccCCCCcccccCchhHHHHHHH--cCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCc------------CCCcchh
Confidence 68999999999999999999999 998888 9999999999999999998 34444 6778889
Q ss_pred cCChhhHHHHHHHhcC
Q 024455 88 FDSPSSLIKHKEACSL 103 (267)
Q Consensus 88 F~~~~~L~~H~~~h~~ 103 (267)
|.+.+.|..|+++|+|
T Consensus 67 f~~~~~l~~H~~~H~g 82 (82)
T 2kmk_A 67 FSQSSNLITHSRKHTG 82 (82)
T ss_dssp ESSHHHHHHHHHHHC-
T ss_pred hCChHHHHHHHHhhCC
Confidence 9999999999999975
No 22
>2gbz_A Oligoribonuclease; ORN, deddh, structural genomics, hydrolase; 2.30A {Xanthomonas campestris PV}
Probab=99.64 E-value=2.4e-17 Score=131.72 Aligned_cols=109 Identities=14% Similarity=0.172 Sum_probs=86.8
Q ss_pred CCceeeeeccccCCcC-CCCccceeeEEEecCCCC---eeEecccCCCCCc----ccccccc---ccCCHHhhccCCCHH
Q 024455 134 GPKAVAMDCEMVGGGS-NGTLDLCARVCLVDEDEN---VIFHTYVQPQLPV----TNYRYEV---TGLTEEDIKNAMPLK 202 (267)
Q Consensus 134 ~~~~~~~dcE~~g~~~-~~~~~~i~~v~vvd~~~~---~~~~~~v~P~~~i----~~~~~~~---~GIt~~~l~~~~~~~ 202 (267)
...++++|+||+|.+. .+++++++.|. .++.+. ..|+.+|+|..++ ++|..++ ||||+++++++|+++
T Consensus 8 ~~~~vviD~ETTGl~p~~d~IieIgav~-~~~~~~~~~~~~~~~v~p~~~i~~~~~~~~~~~~~itGIt~~~l~~~p~~~ 86 (194)
T 2gbz_A 8 NDRLIWIDLEMTGLDTDRDSIIEIATIV-TDAQLNVLAEGPELAIAHSLETLEAMDEWNRNQHRRSGLWQRVLDSQVTHA 86 (194)
T ss_dssp CCEEEEEEEEESCSCTTTCCEEEEEEEE-EETTCCEEEECCCEECCCCHHHHHTSCSHHHHHHHHHTHHHHHHHCCCCHH
T ss_pred CCCEEEEEeECCCCCCCCCccEEEEEEE-EcCCcceeccCceEEEeCCHHHhhccchHHHHHHHhhCCCHHHHhcCCCHH
Confidence 3468999999999875 46788888887 666643 2478899998776 5556555 999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcccccCCCceE------EEeccchhhhccccccCCC------Cceecccc
Q 024455 203 EVKDKILEILNNGESTGRLMLDDGKARL------LVGHGLEHDLDSLRMNYPD------HMLRDTAK 257 (267)
Q Consensus 203 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~------lvgh~~~~Dl~~l~~~~~~------~~~~dt~~ 257 (267)
+|+.+|++|| ++.+ |||||+.||+.||+..+++ ...+|+..
T Consensus 87 ev~~~~~~~l--------------~~~~~~~~~~lvghn~~FD~~fL~~~~~~~~~~~~~~~~d~~~ 139 (194)
T 2gbz_A 87 QAEAQTVAFL--------------GEWIRAGASPMCGNSICQDRRFLHRQMSRLERYFHYRNLDVST 139 (194)
T ss_dssp HHHHHHHHHH--------------TTTCCTTSSCEEESSHHHHHHHHHHHCHHHHHHSCSCEEEHHH
T ss_pred HHHHHHHHHH--------------HHhCCCCCceEEecCHHHhHHHHHHHHHHhcccCCCccccHHH
Confidence 9999999999 4444 9999999999999865543 35667653
No 23
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=99.63 E-value=2.4e-16 Score=116.43 Aligned_cols=85 Identities=24% Similarity=0.391 Sum_probs=71.8
Q ss_pred CCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc--chhhcCCHHHHHhhc-----CCCCCCCcCCccccccccc
Q 024455 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (267)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~ 82 (267)
++++|.|+.|++.|.+...|..|+++ |.++++ .|.. |++.|.+...|..|+ .++|.|+ ++
T Consensus 31 ~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~----------~~ 98 (124)
T 1ubd_C 31 GPRVHVCAECGKAFVESSKLKRHQLV--HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP----------FD 98 (124)
T ss_dssp SCCCEECTTTCCEESSHHHHHHHGGG--TSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCC----------ST
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECC----------CC
Confidence 57899999999999999999999999 999998 9975 999999999999998 4566652 24
Q ss_pred ccccccCChhhHHHHHHHhcCCCCc
Q 024455 83 LCMNIFDSPSSLIKHKEACSLSAPV 107 (267)
Q Consensus 83 ~C~~~F~~~~~L~~H~~~h~~~~~~ 107 (267)
.|++.|.+.+.|..|+++|++++++
T Consensus 99 ~C~~~f~~~~~L~~H~~~H~~~k~~ 123 (124)
T 1ubd_C 99 GCNKKFAQSTNLKSHILTHAKAKNN 123 (124)
T ss_dssp TCCCCCSSTTTTHHHHHHHC-----
T ss_pred CCCCccCCHHHHHHHHHHHcccccC
Confidence 5889999999999999999999875
No 24
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.63 E-value=2.5e-16 Score=120.81 Aligned_cols=92 Identities=34% Similarity=0.621 Sum_probs=82.8
Q ss_pred CCCCccccccC-----ccccCChHHHHHHHhHhcCCCCCC-Cccc--chhhcCCHHHHHhhc-----CCCCCCCc--CCc
Q 024455 10 RSTARHKCVAC-----YKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAH--CSG 74 (267)
Q Consensus 10 ~~~k~~~C~~C-----~k~f~~~~~l~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~--C~k 74 (267)
.++++|.|+.| ++.|.+...|..|+++ |.++++ .|+. |++.|.+...|..|+ .++|.|+. |++
T Consensus 30 ~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~ 107 (155)
T 2gli_A 30 GERKEFVCHWGGCSRELRPFKAQYMLVVHMRR--HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK 107 (155)
T ss_dssp SCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHH--HHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCC
T ss_pred CCCcceeCCCCCccchhhhhhhHHHHHHHHHh--cCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCC
Confidence 47789998743 4999999999999999 998888 9985 999999999999998 56899998 999
Q ss_pred cccccc-----------------ccc--cccccCChhhHHHHHHHhcC
Q 024455 75 IFSDRG-----------------CNL--CMNIFDSPSSLIKHKEACSL 103 (267)
Q Consensus 75 ~f~~~~-----------------C~~--C~~~F~~~~~L~~H~~~h~~ 103 (267)
.|.+.. |+. |++.|.+.+.|..|+++|+|
T Consensus 108 ~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg 155 (155)
T 2gli_A 108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155 (155)
T ss_dssp EESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred ccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence 998863 988 99999999999999999986
No 25
>1zbh_A 3'-5' exonuclease ERI1; histone mRNA 3'-END-specific recognition, structures of 3'- exonuclease and ITS RNA complex, hydrolase/RNA complex; HET: AMP; 3.00A {Homo sapiens}
Probab=99.63 E-value=2.8e-16 Score=133.61 Aligned_cols=119 Identities=18% Similarity=0.252 Sum_probs=94.2
Q ss_pred CCceeeeeccccCCc-----CCCCccceeeEEEecCCCCee--EecccCCCC--CccccccccccCCHHhhccCCCHHHH
Q 024455 134 GPKAVAMDCEMVGGG-----SNGTLDLCARVCLVDEDENVI--FHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKEV 204 (267)
Q Consensus 134 ~~~~~~~dcE~~g~~-----~~~~~~~i~~v~vvd~~~~~~--~~~~v~P~~--~i~~~~~~~~GIt~~~l~~~~~~~~v 204 (267)
...++++|+|++|.. ...++++++.|.+.+..+.++ |+++|+|.. +|+++.+.+||||+++|++++++++|
T Consensus 77 ~~~~vviD~ETTGl~~~~~~~~~~IIeIgaV~v~~~~g~i~~~f~~lV~P~~~~~i~~~~~~ihGIt~e~v~~ap~~~ev 156 (299)
T 1zbh_A 77 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQV 156 (299)
T ss_dssp CSEEEEECCEECCCTTCCTTCCCCEEEEEEEEEETTTCCEEEEEEEEBCCSSSCSCCHHHHHHHCCCHHHHHTSBCHHHH
T ss_pred CceEEEEEeecccCCCCCCCCCCceEEEEEEEEECCCCeEeeeeeeeecCCCCCCCCHHHHHHhCCCHHHHhcCCCHHHH
Confidence 456799999999985 356788888888876555544 999999998 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccCCCceEEEeccchhhhc-cccc-------cCCCC--ceecccccc
Q 024455 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLRM-------NYPDH--MLRDTAKYR 259 (267)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~-~l~~-------~~~~~--~~~dt~~~~ 259 (267)
+.+|.+||.+..- .+.+.+|||||+.||+. ||+. ..|.. .+|||..++
T Consensus 157 l~~f~~~l~~~~~-------~~~~~~lVahn~~fD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~ 214 (299)
T 1zbh_A 157 LKKVIDLMKLKEL-------GTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSY 214 (299)
T ss_dssp HHHHHHHHHHTTB-------TTTBCEEEEESSSHHHHTHHHHHHHHTTBCCCGGGSEEEEHHHHH
T ss_pred HHHHHHHHhhccc-------CCCCcEEEEEeCHHHHHHHHHHHHHHcCCCCCcccchHHHHHHHH
Confidence 9999999953100 00125999999999999 9953 34432 588986443
No 26
>3mxm_B Three prime repair exonuclease 1; RNAse H-like fold, polyproline type II helix, hydrolase-DNA; HET: DNA; 1.75A {Mus musculus} SCOP: c.55.3.5 PDB: 3mxj_B 2ioc_B 3mxi_B* 3b6o_A* 2o4g_A* 3b6p_A* 2o4i_A 2oa8_A
Probab=99.62 E-value=1.3e-16 Score=131.68 Aligned_cols=114 Identities=14% Similarity=0.120 Sum_probs=92.3
Q ss_pred CceeeeeccccCCc-CCCCccceeeEEEecC-------------------CCCeeEecccCCCCCccccccccccCCHHh
Q 024455 135 PKAVAMDCEMVGGG-SNGTLDLCARVCLVDE-------------------DENVIFHTYVQPQLPVTNYRYEVTGLTEED 194 (267)
Q Consensus 135 ~~~~~~dcE~~g~~-~~~~~~~i~~v~vvd~-------------------~~~~~~~~~v~P~~~i~~~~~~~~GIt~~~ 194 (267)
..++++|+|++|.. ..+++++++.|.+.++ .....++++|+|..+|++..+.+||||+++
T Consensus 12 ~~~vv~D~ETTGl~~~~d~IiEIgav~v~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~li~P~~~i~~~~~~i~GIt~~~ 91 (242)
T 3mxm_B 12 QTLIFLDLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSKAE 91 (242)
T ss_dssp SEEEEEEEEESSCGGGCCCEEEEEEEEEEHHHHHTSCCCCSSSCCCCCCCSCCEEEEEECCCSSCCCHHHHHHHCCCHHH
T ss_pred ceEEEEEeecCCCCCCCCeeEEEEEEEecCCcccccccccccccccccccchhheeEEEECCCCCCCHHHHHhcCCCHHH
Confidence 45799999999987 4578999999998765 234578999999999999999999999999
Q ss_pred hccC--CCHH-HHHHHHHHHHhcCCCCCcccccCCCceEEEeccc-hhhhccccc-------cC--CCCceeccccc
Q 024455 195 IKNA--MPLK-EVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLRM-------NY--PDHMLRDTAKY 258 (267)
Q Consensus 195 l~~~--~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~Dl~~l~~-------~~--~~~~~~dt~~~ 258 (267)
|+++ |+++ +|+.+|.+|+++. +...+|||||+ .||+.||+. .. +...++||..+
T Consensus 92 l~~~g~p~~~~ev~~~~~~fl~~~----------~~~~~lVaHNav~FD~~fL~~~~~r~g~~~~~~~~~~iDtl~l 158 (242)
T 3mxm_B 92 LEVQGRQRFDDNLAILLRAFLQRQ----------PQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIAA 158 (242)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHHTS----------CSSEEEEETTTTTTHHHHHHHHHHTSSSCCTTTTCEEEEHHHH
T ss_pred HHhcCCCchhHHHHHHHHHHHhcC----------CCCCEEEEcCChHhhHHHHHHHHHHcCCCCCccCCeEeehHHH
Confidence 9998 8996 9999999999310 01289999995 999999963 22 23467888754
No 27
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.62 E-value=6e-17 Score=121.44 Aligned_cols=103 Identities=15% Similarity=0.153 Sum_probs=84.1
Q ss_pred HHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCC
Q 024455 32 EHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 32 ~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
.|.++ |.|+++ .|++||+.|.+.++|..|+ .++|. |++|++.|.+.+.|..|+++|++++
T Consensus 12 h~~~~--h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~------------C~~C~k~F~~~~~L~~H~~~H~~~k 77 (133)
T 2lt7_A 12 HYELI--VDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYP------------CRYCEKVFPLAEYRTKHEIHHTGER 77 (133)
T ss_dssp EEEEE--ETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEE------------CSSSSCEESSHHHHHHHHHHHHTCC
T ss_pred hceee--cCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCee------------CCccCeecccccchhhhccccCCCc
Confidence 34556 899999 9999999999999999999 34554 6678888999999999999999999
Q ss_pred Ccc---ccccCcchhhhhhhccccccccccCCCceeeeeccccCCcCC
Q 024455 106 PVP---FEKTLSNAESQKKISGAIDEKRTCRGPKAVAMDCEMVGGGSN 150 (267)
Q Consensus 106 ~~~---C~~~f~~~~~l~~H~~~~~~~r~~~~~~~~~~dcE~~g~~~~ 150 (267)
||. |++.|.....|..|++.+++..... ....+.|+.|+..+.
T Consensus 78 ~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~--~~k~~~C~~C~k~~~ 123 (133)
T 2lt7_A 78 RYQCLACGKSFINYQFMSSHIKSVHSQDPSG--DSKLYRLHPCRSLQI 123 (133)
T ss_dssp CEEESSSCCEESSHHHHHHHHHHHTCCCTTS--SSCCEEECCCCSSCC
T ss_pred cccCCCCCCCcCCHHHHHHHhHHhcCCCCCC--CCCCeecCCCCchhh
Confidence 997 9999999999999998776533222 224577888886543
No 28
>3u3y_B Three prime repair exonuclease 1; RNAse H fold, 3' exonuclease, homodimer, hydrolase-DNA compl; HET: BU1; 2.28A {Mus musculus} PDB: 3u6f_B*
Probab=99.61 E-value=2.3e-16 Score=133.56 Aligned_cols=113 Identities=14% Similarity=0.128 Sum_probs=91.8
Q ss_pred CceeeeeccccCCc-CCCCccceeeEEEecCC-------------------CCeeEecccCCCCCccccccccccCCHHh
Q 024455 135 PKAVAMDCEMVGGG-SNGTLDLCARVCLVDED-------------------ENVIFHTYVQPQLPVTNYRYEVTGLTEED 194 (267)
Q Consensus 135 ~~~~~~dcE~~g~~-~~~~~~~i~~v~vvd~~-------------------~~~~~~~~v~P~~~i~~~~~~~~GIt~~~ 194 (267)
..++++|+|++|.. ..+++++|+.|.+.++. ....++++|+|..+|+...+++||||+++
T Consensus 12 ~tfVv~DlETTGL~~~~d~IIEIgaV~v~~~~l~~~~~~~g~~~~~~~~~~v~~~~~~lI~P~~~I~~~a~~IhGIT~e~ 91 (314)
T 3u3y_B 12 QTLIFLDLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSKAE 91 (314)
T ss_dssp SEEEEEEEEESSCGGGCCCEEEEEEEEEEHHHHHC--CCCSSSCCCCCCCSSCEEEEEECBCSSCCCHHHHHHHSCCHHH
T ss_pred CCEEEEEEECCCCCCCCCeEEEEEEEEEECCccccccccccccccccccceeeeeEEEEECCCCCCCHHHHHhcCCCHHH
Confidence 45799999999987 45789999999887542 33578999999999999999999999999
Q ss_pred hccC--CCH-HHHHHHHHHHHhcCCCCCcccccCCCceEEEecc-chhhhccccc-------cC--CCCceecccc
Q 024455 195 IKNA--MPL-KEVKDKILEILNNGESTGRLMLDDGKARLLVGHG-LEHDLDSLRM-------NY--PDHMLRDTAK 257 (267)
Q Consensus 195 l~~~--~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~-~~~Dl~~l~~-------~~--~~~~~~dt~~ 257 (267)
|+++ |+| ++|+++|.+|+++. +...+||||| +.||+.||+. .. .....+||..
T Consensus 92 l~~aG~P~f~~ev~~~l~~fL~~~----------~~~~vLVAHNga~FD~~FL~~el~r~Gl~~~~~~~~~iDTL~ 157 (314)
T 3u3y_B 92 LEVQGRQRFDDNLAILLRAFLQRQ----------PQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIA 157 (314)
T ss_dssp HHHTTCCBSCHHHHHHHHHHHHTS----------CSSEEEEETTTTTTHHHHHHHHHHTSSSCCTTTTCEEEEHHH
T ss_pred HHhCCCCCcHHHHHHHHHHHHhcC----------CCCcEEEEeCcHHHHHHHHHHHHHHcCCCCCCCCceEEeHHH
Confidence 9999 899 79999999999320 0228999999 9999999963 22 2345778764
No 29
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=99.61 E-value=1.4e-15 Score=107.87 Aligned_cols=86 Identities=23% Similarity=0.473 Sum_probs=74.0
Q ss_pred CCCCCCCCCCcccccc--CccccCChHHHHHHHhHhcCCCCCC-Ccc--cchhhcCCHHHHHhhc-----CCCCCCCcCC
Q 024455 4 EAELPKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCS 73 (267)
Q Consensus 4 ~~~~~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~ 73 (267)
++.+....+++|.|+. |++.|.....|..|+++ |.++++ .|. .|++.|.+...|..|+ .++|.
T Consensus 5 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~----- 77 (100)
T 2ebt_A 5 SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRT--HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ----- 77 (100)
T ss_dssp CCCCCCCSCCCEECCSSSCCCEESCHHHHHHHHHH--HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCB-----
T ss_pred CCCcccccCcceEcCCCCCCCcccCHHHHHHHHHH--hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeE-----
Confidence 3444556888999996 99999999999999999 998888 996 6999999999999998 34454
Q ss_pred cccccccccccccccCChhhHHHHHHHhcC
Q 024455 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSL 103 (267)
Q Consensus 74 k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~ 103 (267)
|+.|++.|...+.|..|+++|++
T Consensus 78 -------C~~C~~~f~~~~~l~~H~~~H~~ 100 (100)
T 2ebt_A 78 -------CGVCNRSFSRSDHLALHMKRHQN 100 (100)
T ss_dssp -------CSSSCCBCSSHHHHHHHHHHHCC
T ss_pred -------CCCCcCccCCHHHHHHHHHHhCC
Confidence 66788899999999999999974
No 30
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.60 E-value=5.5e-16 Score=112.10 Aligned_cols=81 Identities=31% Similarity=0.548 Sum_probs=72.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhcC-----CCCCCCcCCccccccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLT-----GPLSKAHCSGIFSDRGCN 82 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~-----~~~~C~~C~k~f~~~~C~ 82 (267)
.+++++|.| .|++.|.+...|..|++. |.++++ .|..|++.|.+...|..|+. ++| .|+
T Consensus 5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~------------~C~ 69 (110)
T 2csh_A 5 SSGDKLYPC-QCGKSFTHKSQRDRHMSM--HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY------------ECN 69 (110)
T ss_dssp CCCCCCEEC-TTSCEESSHHHHHHHHHH--HSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCE------------ECS
T ss_pred CCCCCCEec-cCCCccCCHHHHHHHHHH--cCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCe------------eCC
Confidence 468999999 999999999999999999 998888 99999999999999999982 233 377
Q ss_pred ccccccCChhhHHHHHHHhcCC
Q 024455 83 LCMNIFDSPSSLIKHKEACSLS 104 (267)
Q Consensus 83 ~C~~~F~~~~~L~~H~~~h~~~ 104 (267)
.|++.|.....|..|+++|+..
T Consensus 70 ~C~~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 70 ICAKRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp SSCCEESCHHHHHHHHHHHHHH
T ss_pred CCcchhcCHHHHHHHHHHcccc
Confidence 8899999999999999999743
No 31
>1y97_A Three prime repair exonuclease 2; TREX2, hydrolase; 2.50A {Homo sapiens} SCOP: c.55.3.5
Probab=99.60 E-value=1e-15 Score=126.17 Aligned_cols=115 Identities=21% Similarity=0.195 Sum_probs=92.4
Q ss_pred CCceeeeeccccCCcC-CCCccceeeEEEecC----------------CCCeeEecccCCCCCccccccccccCCHHhh-
Q 024455 134 GPKAVAMDCEMVGGGS-NGTLDLCARVCLVDE----------------DENVIFHTYVQPQLPVTNYRYEVTGLTEEDI- 195 (267)
Q Consensus 134 ~~~~~~~dcE~~g~~~-~~~~~~i~~v~vvd~----------------~~~~~~~~~v~P~~~i~~~~~~~~GIt~~~l- 195 (267)
...++++|+||+|... ..++++++.+.+.++ .....|+.+|+|..+|+++.+++||||+++|
T Consensus 9 ~~~~v~iD~ETTGl~~~~~~IieIg~v~~~~~~~~~~~~~~~~~~~~~~i~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~ 88 (238)
T 1y97_A 9 AETFVFLDLEATGLPSVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTLCMCPERPFTAKASEITGLSSEGLA 88 (238)
T ss_dssp CSEEEEEEEEESSCGGGCCCEEEEEEEEEEHHHHTSCBC---CCCBCCSSCEEEEEECCCSSCCCHHHHHHHCCCHHHHH
T ss_pred cCeEEEEEeeCCCcCCCCCcEEEEEEEEecccccccccccccccccccccceeeEEEECCCCcCCHHHHHHhCCCHHHHh
Confidence 3468999999999874 367889899888754 3345699999999999999999999999999
Q ss_pred -ccCCCH-HHHHHHHHHHHhcCCCCCcccccCCCceEEEeccc-hhhhccccc-------cCC-CCceeccccc
Q 024455 196 -KNAMPL-KEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLRM-------NYP-DHMLRDTAKY 258 (267)
Q Consensus 196 -~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~Dl~~l~~-------~~~-~~~~~dt~~~ 258 (267)
.++|+| ++|.+.|.+|+.. .+++.+|||||+ .||+.||+. .+| ...++||..+
T Consensus 89 ~~~~p~f~~~v~~~l~~fl~~----------~~~~~~lVahN~~~FD~~fL~~~~~~~g~~~~~~~~~iDt~~l 152 (238)
T 1y97_A 89 RCRKAGFDGAVVRTLQAFLSR----------QAGPICLVAHNGFDYDFPLLCAELRRLGARLPRDTVCLDTLPA 152 (238)
T ss_dssp HTTCCCSCHHHHHHHHHHHTT----------SCSSEEEEETTTTTTHHHHHHHHHHHHTCCCCTTCEEEEHHHH
T ss_pred hcCCCccHHHHHHHHHHHHHh----------CCCCCEEEecCchhhhHHHHHHHHHHcCCCCCCCCEEEEHHHH
Confidence 577999 5999999999931 012389999999 999999963 334 3568998643
No 32
>2xri_A ERI1 exoribonuclease 3; hydrolase, metal binding; 2.15A {Homo sapiens}
Probab=99.60 E-value=5.2e-16 Score=126.69 Aligned_cols=108 Identities=19% Similarity=0.272 Sum_probs=90.0
Q ss_pred CceeeeeccccCCcCC---CCccceeeEEEecCCCCe--eEecccCCCC--CccccccccccCCHHhhccCCCHHHHHHH
Q 024455 135 PKAVAMDCEMVGGGSN---GTLDLCARVCLVDEDENV--IFHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKEVKDK 207 (267)
Q Consensus 135 ~~~~~~dcE~~g~~~~---~~~~~i~~v~vvd~~~~~--~~~~~v~P~~--~i~~~~~~~~GIt~~~l~~~~~~~~v~~~ 207 (267)
..++++|+|++|.... .++++++.|.+.++.+.. .|+.+|+|.. +|+++.+++||||+++|++++++++|+++
T Consensus 31 ~~~vviD~ETTGl~~~~d~~~IieIgav~v~~~~~~i~~~f~~lV~P~~~~~i~~~~~~ltGIt~~~v~~a~~~~~v~~~ 110 (224)
T 2xri_A 31 HYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLER 110 (224)
T ss_dssp SEEEEECCEECCCC-CCSSCCEEEEEEEEEETTTCCEEEEEEEECCCSSSCSCCHHHHHHHCCCHHHHTTCCCHHHHHHH
T ss_pred CeEEEEEEEcCCCCCCCCCcceEEEEEEEEecCCcEEeeeeeeEECCCCCCcCCHHHHHHhCcCHHHHcCCCCHHHHHHH
Confidence 4579999999998754 378888998888764544 4999999997 89999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcccccCCCceEEEeccc--------hhhhcc-cc-------ccCCCC--ceeccc
Q 024455 208 ILEILNNGESTGRLMLDDGKARLLVGHGL--------EHDLDS-LR-------MNYPDH--MLRDTA 256 (267)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~lvgh~~--------~~Dl~~-l~-------~~~~~~--~~~dt~ 256 (267)
|.+|+ ++.+|||||+ .||+.| |+ +..|.. .+||++
T Consensus 111 f~~~l--------------~~~~lv~hn~~~~~~t~g~fD~~fll~~~~~~~g~~~p~~~~~~iD~~ 163 (224)
T 2xri_A 111 VDEWM--------------AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLK 163 (224)
T ss_dssp HHHHH--------------HHTTTTSTTSCEEEEESSSHHHHTHHHHHHHHHTCCCCGGGSCEEEHH
T ss_pred HHHHH--------------hhcccccCCCceEEEEeChhhHHHHHHHHHHHhCCCCcccccceEeHH
Confidence 99999 6678999999 999998 63 344432 678843
No 33
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=9.8e-16 Score=111.66 Aligned_cols=87 Identities=21% Similarity=0.214 Sum_probs=70.9
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC--Ccccchhhc--CCHHHHHhhc-----CCCCCCCcCCccccccc
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP--KCAVCQKLS--KSFESLREHL-----TGPLSKAHCSGIFSDRG 80 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~--~C~~C~~~f--~~~~~l~~H~-----~~~~~C~~C~k~f~~~~ 80 (267)
+++++|.|+.|++.|.+...|..|++++.|.+.++ .|+.|++.| .....|..|+ .++|.
T Consensus 15 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~------------ 82 (115)
T 2dmi_A 15 TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK------------ 82 (115)
T ss_dssp CCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB------------
T ss_pred CCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE------------
Confidence 68899999999999999999999998722444444 699999999 8999999998 23443
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~ 108 (267)
|++|++.|...+.|..|+++|+......
T Consensus 83 C~~C~k~f~~~~~L~~H~~~hh~~~~~~ 110 (115)
T 2dmi_A 83 CMYCGHSFESLQDLSVHMIKTKHYQKVS 110 (115)
T ss_dssp CSSSCCBCSSHHHHHHHHHHTTTTTCSC
T ss_pred CCCCCCccCCHHHHHHHHHHhCCcccCC
Confidence 6778889999999999999988766544
No 34
>1zbu_A ERI-1 homolog, 3'-5' exonuclease ERI1; hydrolase; HET: AMP; 3.00A {Homo sapiens}
Probab=99.59 E-value=4.6e-16 Score=134.47 Aligned_cols=119 Identities=18% Similarity=0.258 Sum_probs=94.2
Q ss_pred CCceeeeeccccCCc-----CCCCccceeeEEEecCCCCe--eEecccCCCC--CccccccccccCCHHhhccCCCHHHH
Q 024455 134 GPKAVAMDCEMVGGG-----SNGTLDLCARVCLVDEDENV--IFHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKEV 204 (267)
Q Consensus 134 ~~~~~~~dcE~~g~~-----~~~~~~~i~~v~vvd~~~~~--~~~~~v~P~~--~i~~~~~~~~GIt~~~l~~~~~~~~v 204 (267)
...++++|+|++|.. ...++++|+.|.+.+..+.+ .|+++|+|.. +|+++.+.+||||+++|++++++.+|
T Consensus 127 ~~~~vviD~ETTGl~~~~~~~~deIIEIgaV~vd~~~g~i~~~f~~lVkP~~~~~I~~~~t~ihGIT~e~v~~ap~~~eV 206 (349)
T 1zbu_A 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQV 206 (349)
T ss_dssp CSEEEECCCEECCCTTCCTTCCCCEEECCEEEEETTTTEEEEEECCBEECSSSCSCCHHHHHHHCCCHHHHHTSEEHHHH
T ss_pred CCeEEEEEEecCCCCCcCCCCCCeEEEEEEEEEECCCceEeEEEEEEECCCCCCCCCHHHHHHhCCCHHHHhCCCCHHHH
Confidence 356799999999984 35678898999888655544 4999999998 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccCCCceEEEeccchhhhc-cccc-------cCCCC--ceecccccc
Q 024455 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLRM-------NYPDH--MLRDTAKYR 259 (267)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~-~l~~-------~~~~~--~~~dt~~~~ 259 (267)
+.+|.+||.+..- ...+.+|||||+.||+. ||+. ..|.. .++||..++
T Consensus 207 l~~f~~~l~~~~~-------~~~~~~lVaHNa~FD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~ 264 (349)
T 1zbu_A 207 LKKVIDLMKLKEL-------GTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSY 264 (349)
T ss_dssp HHHHHHHHHHTTB-------TTTBCEEEEESSSHHHHTHHHHHHHHTTBCCCGGGSEEEEHHHHH
T ss_pred HHHHHHHHhcccc-------cCCCcEEEEECcHhhHHHHHHHHHHHhCCCCccccchHHHHHHHH
Confidence 9999999953100 00125999999999999 9963 34432 578887543
No 35
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.59 E-value=4.1e-16 Score=100.00 Aligned_cols=51 Identities=25% Similarity=0.460 Sum_probs=41.0
Q ss_pred CCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc
Q 024455 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (267)
.||||+|++||+.|.+.+.|..|+++ |++++| .|++||+.|.+.++|..|+
T Consensus 1 SEKpy~C~~C~k~F~~~~~L~~H~~~--Ht~ekp~~C~~C~k~F~~~~~L~~H~ 52 (60)
T 4gzn_C 1 SERPFFCNFCGKTYRDASGLSRHRRA--HLGYRPRSCPECGKCFRDQSEVNRHL 52 (60)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHHH--HHTCCCEECTTTCCEESSHHHHHHHG
T ss_pred CCCCccCCCCCCEeCCHHHHHHHHHH--hCCCcCeECCCCCCCcCCHHHHHHHh
Confidence 48999999999999999999999999 999877 6666665555555555554
No 36
>3tr8_A Oligoribonuclease; transcription, hydrolase; 2.50A {Coxiella burnetii}
Probab=99.59 E-value=4.1e-16 Score=123.08 Aligned_cols=114 Identities=16% Similarity=0.163 Sum_probs=84.9
Q ss_pred CCCceeeeeccccCCc-CCCCccceeeEEEecCCCCee---EecccCCCC----Ccccc---ccccccCCHHhhccCCCH
Q 024455 133 RGPKAVAMDCEMVGGG-SNGTLDLCARVCLVDEDENVI---FHTYVQPQL----PVTNY---RYEVTGLTEEDIKNAMPL 201 (267)
Q Consensus 133 ~~~~~~~~dcE~~g~~-~~~~~~~i~~v~vvd~~~~~~---~~~~v~P~~----~i~~~---~~~~~GIt~~~l~~~~~~ 201 (267)
....++++|+||+|.+ ..++++++|.| +.++++..+ ++.+|+++. .++++ ...+||||+++++++|++
T Consensus 7 ~~~~~v~~D~ETTGL~p~~d~IiEIgaV-~~d~~~~i~~~~~~~~i~~p~~~l~~~~~~~~~ih~ltGIt~~~l~~~p~~ 85 (186)
T 3tr8_A 7 SDDNLIWLDLEMTGLDPERDRIIEIATI-VTNSHLDILAEGPAFAIHQPDKLLTAMDNWNTSHHTASGLLERVKNSSVDE 85 (186)
T ss_dssp CTTCEEEEEEEESSSCTTTCCEEEEEEE-EECTTCCEEEECCCEECCCCHHHHTTSCHHHHHHHHHTSHHHHHHTCCCCH
T ss_pred CCCcEEEEEEECCCCCCCCCceEEEEEE-EEcCCeEEeeeeEEEEEeCCccccccCCcccHHHHhccCCCHHHHhcCCCH
Confidence 3457899999999998 44778899999 888766543 345586433 23445 445679999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccccCCCceEEEeccchhhhccccccCC------CCceecc
Q 024455 202 KEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP------DHMLRDT 255 (267)
Q Consensus 202 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~~~~------~~~~~dt 255 (267)
++|+++|++|+.. | .+ .++.+|||||+.||+.||+..++ ...+||.
T Consensus 86 ~ev~~~~l~fl~~----~--~~--~~~~~lvghn~~FD~~FL~~~~~~~~~~~~~~~iDv 137 (186)
T 3tr8_A 86 VEAETLTLAFLEK----Y--VS--AGKSPLCGNSVCQDRRFLSRYMPRLNQFFHYRHLDV 137 (186)
T ss_dssp HHHHHHHHHHHTT----T--SC--TTCSCEEESSTHHHHHHHHHHCHHHHHHSCSCEEEH
T ss_pred HHHHHHHHHHHHH----h--cc--CCCcEEEEEcHHHhHHHHHHHHHHcCCCCCCcEEeH
Confidence 9999999999931 0 11 14579999999999999986543 3467883
No 37
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.58 E-value=8.2e-16 Score=112.53 Aligned_cols=79 Identities=25% Similarity=0.535 Sum_probs=71.7
Q ss_pred CCCccccc--cCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCccccccccc
Q 024455 11 STARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (267)
Q Consensus 11 ~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~ 82 (267)
++++|.|+ .|++.|.+...|..|+++ |.++++ .|+.|++.|.+...|..|+ .++|.| .|+
T Consensus 33 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C----------~~~ 100 (119)
T 2jp9_A 33 GEKPYQCDFKDCERRFSRSDQLKRHQRR--HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC----------RWP 100 (119)
T ss_dssp TTCCEECCSTTCCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEEC----------CST
T ss_pred CCCCccCCCCCCcCccCCHHHHHHHHHH--cCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeC----------CCC
Confidence 67899999 799999999999999999 999888 9999999999999999998 456665 247
Q ss_pred ccccccCChhhHHHHHHHh
Q 024455 83 LCMNIFDSPSSLIKHKEAC 101 (267)
Q Consensus 83 ~C~~~F~~~~~L~~H~~~h 101 (267)
.|++.|.+.+.|..|+++|
T Consensus 101 ~C~~~f~~~~~L~~H~~~H 119 (119)
T 2jp9_A 101 SCQKKFARSDELVRHHNMH 119 (119)
T ss_dssp TCCCEESSHHHHHHHHHTC
T ss_pred CCccccCCHHHHHHHHhcC
Confidence 8999999999999999987
No 38
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=99.56 E-value=1.7e-16 Score=110.26 Aligned_cols=81 Identities=17% Similarity=0.316 Sum_probs=70.1
Q ss_pred CCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhcCCCCCCCcCCcccccccccccccccCC
Q 024455 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDS 90 (267)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~~~F~~ 90 (267)
|+||.|+.|++.|.....|..|+++ |+++++ .|+.|++.|.+...|..|+.... +. ...|+.|++.|..
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~-----~~---~~~c~~C~~~f~~ 70 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIRT--HTGEKPFACDICGRKFARSDERKRHRDIQH-----IL---PILEDKVEELLSK 70 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHH--HHCCCCEECTTTCCEESSHHHHHHHHHHHT-----HH---HHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHH--cCCCCCccCCCCCCccCCHHHHHHHHHHhC-----CC---cchHHHHHHHHHH
Confidence 6899999999999999999999999 999999 99999999999999999982111 01 1138899999999
Q ss_pred hhhHHHHHHHhc
Q 024455 91 PSSLIKHKEACS 102 (267)
Q Consensus 91 ~~~L~~H~~~h~ 102 (267)
...|..|++.++
T Consensus 71 ~~~L~~H~~~~h 82 (88)
T 1llm_C 71 NYHLENEVARLK 82 (88)
T ss_dssp HHHHHHHHHHHH
T ss_pred HhhhHHHHHHHH
Confidence 999999998765
No 39
>3cg7_A CRN-4, cell death-related nuclease 4; hydrolase, apoptosis, 3'-5' exonuclease, deddh; 2.50A {Caenorhabditis elegans} PDB: 3cm5_A 3cm6_A
Probab=99.55 E-value=9.1e-16 Score=130.80 Aligned_cols=111 Identities=20% Similarity=0.238 Sum_probs=89.7
Q ss_pred CceeeeeccccCCcCC-C---CccceeeEEEecCCCC--e--eEecccCCCCC--ccccccccccCCHHhhccCCCHHHH
Q 024455 135 PKAVAMDCEMVGGGSN-G---TLDLCARVCLVDEDEN--V--IFHTYVQPQLP--VTNYRYEVTGLTEEDIKNAMPLKEV 204 (267)
Q Consensus 135 ~~~~~~dcE~~g~~~~-~---~~~~i~~v~vvd~~~~--~--~~~~~v~P~~~--i~~~~~~~~GIt~~~l~~~~~~~~v 204 (267)
..++++|+|++|.+.. + ++++++.|.+...++. . .|+++|+|... |+++.+++||||+++|++++++++|
T Consensus 19 ~~~vviD~ETTGl~~~~d~~~eIIEIgaV~vd~~~g~i~~~~~f~~lV~P~~~p~i~~~~~~ltGIt~e~v~~ap~~~ev 98 (308)
T 3cg7_A 19 DTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNRTLTKNCVDFTGIPQRSIDTADTFDVV 98 (308)
T ss_dssp SEEEEEEEEECCBTTBCSCCCCEEEEEEEEEETTTTEEEEEEEEEEECBCSSBCSCCHHHHHHHCCCHHHHHTSCBHHHH
T ss_pred CeEEEEEeecCCCCCCCCCCCCeEEEEEEEEEcCCCEEeeccceeeEECCCCCCCCCHHHHHHcCCCHHHHhcCCCHHHH
Confidence 4579999999998754 2 7888888877422333 3 58999999984 9999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccCCCceEEEeccc------hhhh-cccc-------ccCCC--Cceecccccc
Q 024455 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGL------EHDL-DSLR-------MNYPD--HMLRDTAKYR 259 (267)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~------~~Dl-~~l~-------~~~~~--~~~~dt~~~~ 259 (267)
+.+|.+|| ++.+|||||+ .||+ .||+ +..|. ..+|||..++
T Consensus 99 l~~f~~~l--------------~~~~lvahn~~lv~~g~fD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~ 155 (308)
T 3cg7_A 99 YEQFQQWL--------------ITLGLEEGKFAFVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIF 155 (308)
T ss_dssp HHHHHHHH--------------HHHCCCTTSEEEEESSSHHHHTHHHHHHHHTTCCCCGGGSEEEEHHHHH
T ss_pred HHHHHHHH--------------HhCCcCCcceEEeccCcccHHHHHHHHHHHcCCCCchhhcceeeHHHHH
Confidence 99999999 6678899999 9999 7985 34453 2578987543
No 40
>2f96_A Ribonuclease T; RNAse, RNT, RNAse T, tRNA hydrolase, SAD, PS protein structure initiative, midwest center for structural genomics; 2.09A {Pseudomonas aeruginosa} SCOP: c.55.3.5
Probab=99.54 E-value=3.4e-15 Score=121.91 Aligned_cols=121 Identities=21% Similarity=0.206 Sum_probs=91.0
Q ss_pred CCceeeeeccccCCcCC-CCccceeeEEEe---cCCC--CeeEecccCC--CCCccccccccccCCHHh-hccCCCHHHH
Q 024455 134 GPKAVAMDCEMVGGGSN-GTLDLCARVCLV---DEDE--NVIFHTYVQP--QLPVTNYRYEVTGLTEED-IKNAMPLKEV 204 (267)
Q Consensus 134 ~~~~~~~dcE~~g~~~~-~~~~~i~~v~vv---d~~~--~~~~~~~v~P--~~~i~~~~~~~~GIt~~~-l~~~~~~~~v 204 (267)
...++++|+|++|.... .++++++.|.+. ++.. ...|+.+|+| ..+|+++.+++||||+++ +++++++++|
T Consensus 28 ~~~~vviD~ETTGl~~~~~~IieIg~v~~~~~~~g~i~~~~~f~~lV~P~~~~~i~~~~~~ihGIt~e~~v~~~~~~~~v 107 (224)
T 2f96_A 28 GYLPVVVDVETGGFNSATDALLEIAATTVGMDEKGFLFPEHTYFFRIEPFEGANIEPAALEFTGIKLDHPLRMAVQEEAA 107 (224)
T ss_dssp TEEEEEEEEEESSSCTTTBCEEEEEEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHTCCTTCTTCCCBCHHHH
T ss_pred CCcEEEEEeeCCCCCCCCCeeEEEEEEEEEEcCCCcccccceEEEEECCCCCCCCCHHHHHHhCCCHHHHHhcCCCHHHH
Confidence 34579999999998754 678888888887 3332 2468999999 578999999999999985 8999999999
Q ss_pred HHHHHHHHhcCCCCCcccccCCCceEEEeccchhhhccccccC--------C--CCceecccccc
Q 024455 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNY--------P--DHMLRDTAKYR 259 (267)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~~~--------~--~~~~~dt~~~~ 259 (267)
+.+|+++|.+. .. ..-.++.+|||||+.||+.||+..+ | ...+|||..+.
T Consensus 108 ~~~~~~~l~~~----~~-~~~~~~~~lV~hn~~FD~~fL~~~~~~~g~~~~p~~~~~~iDt~~l~ 167 (224)
T 2f96_A 108 LTEIFRGIRKA----LK-ANGCKRAILVGHNSSFDLGFLNAAVARTGIKRNPFHPFSSFDTATLA 167 (224)
T ss_dssp HHHHHHHHHHH----HH-HTTCSEEEEEETTHHHHHHHHHHHHHHHTCCCCCEEEEEEEEHHHHH
T ss_pred HHHHHHHHHHH----hh-hcccCCCEEEEeChhhhHHHHHHHHHHcCCCcCCccccceeeHHHHH
Confidence 99999998310 00 0000268999999999999996321 2 34688987543
No 41
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=99.53 E-value=5.9e-15 Score=102.24 Aligned_cols=78 Identities=27% Similarity=0.538 Sum_probs=67.9
Q ss_pred CCCcccccc--CccccCChHHHHHHHhHhcCCCCCC-Ccc--cchhhcCCHHHHHhhc-----CCCCCCCcCCccccccc
Q 024455 11 STARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRG 80 (267)
Q Consensus 11 ~~k~~~C~~--C~k~f~~~~~l~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~ 80 (267)
++++|.|+. |++.|.....|..|+++ |.++++ .|+ .|++.|.+...|..|+ .++|.
T Consensus 2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~------------ 67 (89)
T 2wbs_A 2 RTATHTCDYAGCGKTYTKSSHLKAHLRT--HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ------------ 67 (89)
T ss_dssp -CCCEECCSTTTCCEESSHHHHHHHHTT--SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEE------------
T ss_pred CCCCeeCCCCCCCCcCCCHHHHHHHHHh--cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCcc------------
Confidence 467899999 99999999999999999 999888 997 6999999999999998 33444
Q ss_pred ccccccccCChhhHHHHHHHhc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACS 102 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~ 102 (267)
|+.|++.|...+.|..|+++|.
T Consensus 68 C~~C~~~f~~~~~l~~H~~~H~ 89 (89)
T 2wbs_A 68 CQKCDRAFSRSDHLALHMKRHF 89 (89)
T ss_dssp CSSSSCEESSHHHHHHHGGGGC
T ss_pred CCCCCcccCCHHHHHHHHHhhC
Confidence 6678888999999999999883
No 42
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.52 E-value=1.3e-14 Score=106.81 Aligned_cols=83 Identities=28% Similarity=0.452 Sum_probs=70.1
Q ss_pred CCCCccccccCccccCChHHHHHHHhHh-cCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCccccccccc
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKIS-YHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCN 82 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~-~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~ 82 (267)
.++++|.|+.|++.|.+...|..|++.+ .|.++++ .|+.|++.|.+...|..|+ .++|. |+
T Consensus 31 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~ 98 (124)
T 2dlq_A 31 TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYK------------CS 98 (124)
T ss_dssp SSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEE------------CS
T ss_pred CCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcc------------CC
Confidence 4678999999999999999999999862 1466777 9999999999999999999 33444 67
Q ss_pred ccccccCChhhHHHHHHH-hcCC
Q 024455 83 LCMNIFDSPSSLIKHKEA-CSLS 104 (267)
Q Consensus 83 ~C~~~F~~~~~L~~H~~~-h~~~ 104 (267)
.|++.|.+.+.|..|++. |.++
T Consensus 99 ~C~~~f~~~~~l~~H~~~~H~~~ 121 (124)
T 2dlq_A 99 SCSQQFMQKKDLQSHMIKLHSGP 121 (124)
T ss_dssp SSCCEESSHHHHHHHHHHTSSCS
T ss_pred CccchhCCHHHHHHHHHHHCCCC
Confidence 788899999999999985 6554
No 43
>3v9w_A Ribonuclease T; DEDD nucleases family, EXO-nucleases, hydrolase-DNA complex; HET: DNA; 1.70A {Escherichia coli} PDB: 3ngy_A 3v9u_A* 3ngz_A* 3va3_A* 3v9z_A* 3nh0_A 3nh2_A 3nh1_A* 3v9s_A* 3v9x_A* 3va0_A* 2is3_A
Probab=99.50 E-value=8.7e-15 Score=120.32 Aligned_cols=121 Identities=19% Similarity=0.206 Sum_probs=91.1
Q ss_pred CCceeeeeccccCCc-CCCCccceeeEEEe---cCC--CCeeEecccCC--CCCccccccccccCCHH-hhccCCCHHHH
Q 024455 134 GPKAVAMDCEMVGGG-SNGTLDLCARVCLV---DED--ENVIFHTYVQP--QLPVTNYRYEVTGLTEE-DIKNAMPLKEV 204 (267)
Q Consensus 134 ~~~~~~~dcE~~g~~-~~~~~~~i~~v~vv---d~~--~~~~~~~~v~P--~~~i~~~~~~~~GIt~~-~l~~~~~~~~v 204 (267)
...++++|+|++|.. ...++++++.+.+. ++. ....|+.+|+| ..+++++.+++||||++ ++++++++++|
T Consensus 36 ~~~~vviD~ETTGl~~~~~~IieIgav~~~~~~~g~i~~~~~f~~~v~P~~~~~i~~~~~~i~GIt~e~~v~~~~~~~~v 115 (235)
T 3v9w_A 36 GFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSGYEA 115 (235)
T ss_dssp TEEEEEEEEEESSSCTTTBCEEEEEEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHCCCTTCGGGCCBCHHHH
T ss_pred CCcEEEEEEeCCCCCCCCCeEEEEEEEEEEEcCCCcccccceEEEEECCCCCCCCCHHHHHHhCCCHHHHHhcCCCHHHH
Confidence 446799999999986 44678888888875 333 23568899999 57899999999999999 99999999999
Q ss_pred HHHHHHHHhcCCCCCcccccCCCceEEEeccchhhhccccccC--------C--CCceecccccc
Q 024455 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNY--------P--DHMLRDTAKYR 259 (267)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~~~--------~--~~~~~dt~~~~ 259 (267)
+.+|.+++.+. .. ....++.+|||||+.||+.||+..+ | ...++||..+.
T Consensus 116 l~~~~~~l~~~----~~-~~~~~~~~lVahN~~fD~~~L~~~~~~~g~~~~p~~~~~~~Dt~~la 175 (235)
T 3v9w_A 116 LHEIFKVVRKG----IK-ASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALA 175 (235)
T ss_dssp HHHHHHHHHHH----HT-TTTCCEEEEEETTTHHHHHHHHHHHHHTTCCCCCEEEEEEEEHHHHH
T ss_pred HHHHHHHHHHH----hh-hccCCCcEEEEeChHHHHHHHHHHHHHcCCCCCCCCCCcEEEhHHHH
Confidence 99999999310 00 0000368999999999999995321 1 23578887543
No 44
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.49 E-value=2.5e-14 Score=96.85 Aligned_cols=66 Identities=21% Similarity=0.307 Sum_probs=58.9
Q ss_pred CCCCcccccc--CccccCChHHHHHHHh-HhcCCCCCC-Cccc--chhhcCCHHHHHhhc-----CCCCCCCcCCcccc
Q 024455 10 RSTARHKCVA--CYKQFKRKDHLIEHMK-ISYHSVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFS 77 (267)
Q Consensus 10 ~~~k~~~C~~--C~k~f~~~~~l~~H~~-~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~ 77 (267)
+++++|.|+. |++.|.+...|..|++ . |+++++ .|+. |++.|.+..+|..|+ .++|.|+.|++.|.
T Consensus 3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~--H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~ 79 (79)
T 2dlk_A 3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQ--HIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG 79 (79)
T ss_dssp SCCSSEECSSTTTCCEESSHHHHHHHHHHG--GGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred CCCCCccCCCCCCcCccCCHHHHHHHHHHH--hCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence 5889999986 9999999999999999 7 998888 9998 999999999999998 56888888888773
No 45
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=9.7e-16 Score=111.69 Aligned_cols=94 Identities=10% Similarity=0.051 Sum_probs=79.0
Q ss_pred hHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhcC--CCCCCCcCCccccccccccccccc--CChhhHHHHHHHh
Q 024455 27 KDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLT--GPLSKAHCSGIFSDRGCNLCMNIF--DSPSSLIKHKEAC 101 (267)
Q Consensus 27 ~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~--~~~~C~~C~k~f~~~~C~~C~~~F--~~~~~L~~H~~~h 101 (267)
.+.|..|+++ |+++++ .|+.|++.|.+...|..|+. +.+.+... ..|+.|++.| .....|..|+++|
T Consensus 4 ~~~l~~H~~~--H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~------~~C~~C~~~f~f~~~~~l~~H~~~H 75 (115)
T 2dmi_A 4 GSSGKLYGSI--FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNH------ETDNNNPKRWSKPRKRSLLEMEGKE 75 (115)
T ss_dssp CCCCCCCCCC--CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCC------CCCCCCCSCCSSCCCCCCCCCCCSC
T ss_pred chhhhhheee--eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCC------ccCCCCCcccccccHHHHHHHhhcc
Confidence 4567889999 999999 99999999999999999983 23333211 1288899988 8999999999999
Q ss_pred cCCCCcc---ccccCcchhhhhhhcccccc
Q 024455 102 SLSAPVP---FEKTLSNAESQKKISGAIDE 128 (267)
Q Consensus 102 ~~~~~~~---C~~~f~~~~~l~~H~~~~~~ 128 (267)
++++||. |++.|.....|+.|++.++.
T Consensus 76 ~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~ 105 (115)
T 2dmi_A 76 DAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105 (115)
T ss_dssp CCCSSCBCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred CCCcceECCCCCCccCCHHHHHHHHHHhCC
Confidence 9999997 99999999999999976554
No 46
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=99.47 E-value=2.1e-14 Score=98.37 Aligned_cols=74 Identities=27% Similarity=0.501 Sum_probs=67.2
Q ss_pred cccc--ccCccccCChHHHHHHHhHhcCCCCCC-Cccc--chhhcCCHHHHHhhc---CCCCCCCcCCcccccccccc--
Q 024455 14 RHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNL-- 83 (267)
Q Consensus 14 ~~~C--~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~~~~C~~-- 83 (267)
||.| +.|++.|.....|..|+++ |.++++ .|+. |++.|.+...|..|+ .+ |. |+.
T Consensus 1 p~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~------------C~~~~ 65 (85)
T 2j7j_A 1 MYVCHFENCGKAFKKHNQLKVHQFS--HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YP------------CKKDD 65 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH--HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-EE------------CCSCS
T ss_pred CccCCCCCCCcccCCHHHHHHHHHH--hCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CC------------CCCCC
Confidence 6899 9999999999999999999 999999 9988 999999999999999 33 44 555
Q ss_pred -cccccCChhhHHHHHHHhc
Q 024455 84 -CMNIFDSPSSLIKHKEACS 102 (267)
Q Consensus 84 -C~~~F~~~~~L~~H~~~h~ 102 (267)
|++.|...+.|..|+++|+
T Consensus 66 ~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 66 SCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp SCCCEESSHHHHHHHHHHCC
T ss_pred CCCCccCCHHHHHHHHHhcC
Confidence 8999999999999999985
No 47
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.46 E-value=9.7e-14 Score=106.35 Aligned_cols=109 Identities=16% Similarity=0.215 Sum_probs=82.7
Q ss_pred CCCCC-CcccchhhcCCHHHHHhhcC------CCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc----
Q 024455 40 SVHQP-KCAVCQKLSKSFESLREHLT------GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---- 108 (267)
Q Consensus 40 ~~~~~-~C~~C~~~f~~~~~l~~H~~------~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~---- 108 (267)
..... .|..|++.|.+...|..|+. .+.....|. ...|+.|++.|.....|..|+++|+++++|.
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~----~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~ 96 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY----WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFP 96 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCC----BTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCT
T ss_pred hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCcccc----ccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcC
Confidence 33445 99999999999999999982 122222221 1249999999999999999999999999985
Q ss_pred -ccccCcchhhhhhhccccccccccCCCceeeeeccc--cCCcCCCCccceeeEE
Q 024455 109 -FEKTLSNAESQKKISGAIDEKRTCRGPKAVAMDCEM--VGGGSNGTLDLCARVC 160 (267)
Q Consensus 109 -C~~~f~~~~~l~~H~~~~~~~r~~~~~~~~~~dcE~--~g~~~~~~~~~i~~v~ 160 (267)
|++.|.....|..|+..+.+. ..+.|+. |+..+.....+..++.
T Consensus 97 ~C~~~f~~~~~L~~H~~~h~~~--------~~~~C~~~~C~k~f~~~~~L~~H~~ 143 (155)
T 2rpc_A 97 GCGKIFARSENLKIHKRTHTGE--------KPFKCEFEGCDRRFANSSDRKKHMH 143 (155)
T ss_dssp TTCCEESCHHHHHHHHTTTCSS--------CSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred CCCCccCCHHHHHHHHHhhCCC--------CCccCCCCCCCCccCCHHHHHHHHH
Confidence 788999999999999766542 3477886 9988776655544443
No 48
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.42 E-value=2.5e-13 Score=95.33 Aligned_cols=79 Identities=24% Similarity=0.318 Sum_probs=69.0
Q ss_pred CCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc---c
Q 024455 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---F 109 (267)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C 109 (267)
+.++++ .|..|++.|.+...|..|+ .++| .|+.|++.|.....|..|+++|+++++|. |
T Consensus 3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~------------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 70 (96)
T 2dmd_A 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPY------------KCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70 (96)
T ss_dssp CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSE------------ECSSSCCEESSHHHHHHHHHHSCCCCCEECSSS
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCE------------eCCCCCCccCCHHHHHHHHHHhCCCCCccCCCC
Confidence 566778 9999999999999999998 2233 37778899999999999999999999996 8
Q ss_pred cccCcchhhhhhhccccccc
Q 024455 110 EKTLSNAESQKKISGAIDEK 129 (267)
Q Consensus 110 ~~~f~~~~~l~~H~~~~~~~ 129 (267)
++.|.....|..|++.+.+.
T Consensus 71 ~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 71 PYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp SCEESSHHHHHHHHTTCCSC
T ss_pred CCccCCHHHHHHHHHHhcCC
Confidence 99999999999999877654
No 49
>2qxf_A Exodeoxyribonuclease I; alpha-beta domain, DNAQ superfamily, SH3-like domain, produc structure, DNA damage, DNA repair, exonuclease; HET: TMP; 1.50A {Escherichia coli} SCOP: c.55.3.5 PDB: 1fxx_A* 3c94_A 3c95_A 3hl8_A* 3hp9_A*
Probab=99.42 E-value=1.3e-13 Score=123.69 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=80.6
Q ss_pred CCceeeeeccccCCcCC-CCccceeeEEEecCCCCee---EecccCCCCCc--cccccccccCCHHhhccCCC-HHHHHH
Q 024455 134 GPKAVAMDCEMVGGGSN-GTLDLCARVCLVDEDENVI---FHTYVQPQLPV--TNYRYEVTGLTEEDIKNAMP-LKEVKD 206 (267)
Q Consensus 134 ~~~~~~~dcE~~g~~~~-~~~~~i~~v~vvd~~~~~~---~~~~v~P~~~i--~~~~~~~~GIt~~~l~~~~~-~~~v~~ 206 (267)
...++++|+||+|.+.. ++++++|.|.+. .++.++ ++.+|+|..++ .+..+.+||||+++|.+++. +.+|+.
T Consensus 8 ~~~~vv~DlETTGl~p~~d~IIEIgaV~vd-~~g~ii~~~f~~lVkP~~~ilp~p~a~~IhGIT~e~l~~ap~~~~evl~ 86 (482)
T 2qxf_A 8 QSTFLFHDYETFGTHPALDRPAQFAAIRTD-SEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAA 86 (482)
T ss_dssp CCEEEEEEEEESSSCTTTSCEEEEEEEEEC-TTSCBCSCCEEEEBCCCTTCCCCHHHHHHHCCCHHHHHHHCBCHHHHHH
T ss_pred CCCEEEEEEECCCCCCCCCeEEEEEEEEEE-CCCeEEeeeeEEEECCCCCCCCCHHHHHHhCCCHHHHhcCCCCHHHHHH
Confidence 44689999999998744 678888888765 333333 99999999887 56778999999999998764 599999
Q ss_pred HHHHHHhcCCCCCcccccCCCceEEEecc-chhhhccccc
Q 024455 207 KILEILNNGESTGRLMLDDGKARLLVGHG-LEHDLDSLRM 245 (267)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~lvgh~-~~~Dl~~l~~ 245 (267)
+|.++++. .|.+||||| +.||+.||+.
T Consensus 87 ~f~~~l~~------------~~~~lVaHNs~~FD~~fL~~ 114 (482)
T 2qxf_A 87 RIHSLFTV------------PKTCILGYNNVRFDDEVTRN 114 (482)
T ss_dssp HHHHHHTS------------TTEEEEESSTTTTHHHHHHH
T ss_pred HHHHHHcC------------CCCEEEEECCHHHHHHHHHH
Confidence 99999921 278999999 9999999964
No 50
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.42 E-value=6.6e-14 Score=99.61 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=53.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHh-HhcCCCCCCCcccchhhcCCHHHHHhhcCCCCCCCcCCcccccccccccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~~~ 87 (267)
++|++||.|+.|++.|.+++.|..|++ + |++.. ..++|. |++||+.
T Consensus 13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~--H~~~~-------------------~ekpf~------------C~~Cgk~ 59 (102)
T 2ghf_A 13 KKVEGGYECKYCTFQTPDLNMFTFHVDSE--HPNVV-------------------LNSSYV------------CVECNFL 59 (102)
T ss_dssp CCCCSSEECSSCSCEESCHHHHHHHHHHH--CSSCC-------------------CSCCEE------------ETTTTEE
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHhh--CCCCC-------------------CCCCcC------------CCCCCcc
Confidence 689999999999999999999999997 6 84310 012333 5556677
Q ss_pred cCChhhHHHH-HHHhcCCCCcccccc
Q 024455 88 FDSPSSLIKH-KEACSLSAPVPFEKT 112 (267)
Q Consensus 88 F~~~~~L~~H-~~~h~~~~~~~C~~~ 112 (267)
|..++.|..| +++|++++||.|...
T Consensus 60 F~~~~~L~~H~~r~Htgekpy~C~~~ 85 (102)
T 2ghf_A 60 TKRYDALSEHNLKYHPGEENFKLTMV 85 (102)
T ss_dssp ESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred cCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence 7777788888 678888888887653
No 51
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.40 E-value=3.7e-13 Score=90.67 Aligned_cols=65 Identities=31% Similarity=0.518 Sum_probs=48.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCCCcccchhhcCCHHHHHhhcCCCCCCCcCCccccccccccccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIF 88 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~~~F 88 (267)
.+++++|.|+.|++.|.....|..|+++ |+++++ |. |++|++.|
T Consensus 13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~----------------------~~------------C~~C~~~f 56 (77)
T 2cot_A 13 QRERRRYKCDECGKSFSHSSDLSKHRRT--HTGEKP----------------------YK------------CDECGKAF 56 (77)
T ss_dssp CCCSCSSBCSSSCCBCSCHHHHHHHHTT--TCCSCS----------------------EE------------CSSSCCEE
T ss_pred CCCCCCEECCCCCcccCCHHHHHHHHHH--cCCCcC----------------------ee------------CCCCCCcc
Confidence 5688999999999999999999999999 887654 22 33455555
Q ss_pred CChhhHHHHHHHhcCCCCccc
Q 024455 89 DSPSSLIKHKEACSLSAPVPF 109 (267)
Q Consensus 89 ~~~~~L~~H~~~h~~~~~~~C 109 (267)
.....|..|+++|++++||.|
T Consensus 57 ~~~~~L~~H~~~H~~~~p~~C 77 (77)
T 2cot_A 57 IQRSHLIGHHRVHTGSGPSSG 77 (77)
T ss_dssp SSHHHHHHHGGGSCCCCCCCC
T ss_pred CCHHHHHHHHHHhCCCCCCCC
Confidence 566666666666666666665
No 52
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.39 E-value=1.1e-13 Score=88.50 Aligned_cols=51 Identities=25% Similarity=0.458 Sum_probs=30.6
Q ss_pred CCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCC
Q 024455 42 HQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLS 104 (267)
Q Consensus 42 ~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~ 104 (267)
|+| .|++||+.|.+.++|..|+ .++|. |++||+.|.+.++|..|+++|+++
T Consensus 2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~------------C~~C~k~F~~~~~L~~H~~~Htge 58 (60)
T 4gzn_C 2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRS------------CPECGKCFRDQSEVNRHLKVHQNK 58 (60)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEE------------CTTTCCEESSHHHHHHHGGGGSCC
T ss_pred CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeE------------CCCCCCCcCCHHHHHHHhCccCCC
Confidence 455 6666666666666666666 23333 445555666666666666666655
No 53
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.37 E-value=2.1e-13 Score=97.91 Aligned_cols=81 Identities=15% Similarity=0.154 Sum_probs=69.7
Q ss_pred HHhHhcCCCCCC-CcccchhhcCCHHHHHhhc---CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc
Q 024455 33 HMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (267)
Q Consensus 33 H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~ 108 (267)
+++. |+++++ .|.+|++.|.+...|..|+ .++|. |+.|++.|.....|..|++ |+++++|.
T Consensus 7 ~~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~------------C~~C~~~f~~~~~l~~H~~-H~~~~~~~ 71 (107)
T 1wjp_A 7 GASP--VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV------------CPYCSLRFFSPELKQEHES-KCEYKKLT 71 (107)
T ss_dssp CCCC--CCCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBC------------CTTTCCCBSSHHHHHHHHH-HCSTGGGE
T ss_pred cCcc--cCCCcCeECCCCCCccCCHHHHHHHHHHCCCCcc------------CCCCCCccCCHHHHHHHHH-cCCCCCcc
Confidence 3456 889998 9999999999999999998 34554 6678889999999999996 99999997
Q ss_pred ---ccccCcchhhhhhhcc-cccc
Q 024455 109 ---FEKTLSNAESQKKISG-AIDE 128 (267)
Q Consensus 109 ---C~~~f~~~~~l~~H~~-~~~~ 128 (267)
|++.|.....|+.|++ .+.+
T Consensus 72 C~~C~~~f~~~~~L~~H~~~~H~~ 95 (107)
T 1wjp_A 72 CLECMRTFKSSFSIWRHQVEVHNQ 95 (107)
T ss_dssp EGGGTEECSSHHHHHHHHHHTSCC
T ss_pred CccccchhCCHHHHHHHHHHHcCC
Confidence 8999999999999996 4443
No 54
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=99.36 E-value=1.1e-12 Score=93.83 Aligned_cols=78 Identities=17% Similarity=0.285 Sum_probs=67.3
Q ss_pred CCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc---cc
Q 024455 40 SVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FE 110 (267)
Q Consensus 40 ~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~ 110 (267)
..+++ .|..|++.|.+...|..|+ .++|. |+.|++.|.....|..|+++|+++++|. |+
T Consensus 13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~ 80 (106)
T 2ee8_A 13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYT------------CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECG 80 (106)
T ss_dssp CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCB------------CSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSC
T ss_pred CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcC------------CCCccchhCCHHHHHHHHHHhCCCCCeECCCcC
Confidence 34556 9999999999999999998 34454 6678888999999999999999999997 89
Q ss_pred ccCcchhhhhhhccccccc
Q 024455 111 KTLSNAESQKKISGAIDEK 129 (267)
Q Consensus 111 ~~f~~~~~l~~H~~~~~~~ 129 (267)
+.|.....|..|++.+.+.
T Consensus 81 ~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 81 KGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp CCCSSHHHHHHHHHHTTSC
T ss_pred CcccCHHHHHHHHHHhCCC
Confidence 9999999999999777653
No 55
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.35 E-value=7.8e-13 Score=88.35 Aligned_cols=64 Identities=30% Similarity=0.562 Sum_probs=50.7
Q ss_pred CCCCCCccccccCccccCChHHHHHHHhHhcCCCCCCCcccchhhcCCHHHHHhhcCCCCCCCcCCcccccccccccccc
Q 024455 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (267)
Q Consensus 8 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~~~ 87 (267)
..+++++|+|+.|++.|.....|..|+++ |+++++ |. |+.|++.
T Consensus 11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~----------------------~~------------C~~C~k~ 54 (74)
T 2lce_A 11 MTHSDKPYKCDRCQASFRYKGNLASHKTV--HTGEKP----------------------YR------------CNICGAQ 54 (74)
T ss_dssp CCCCCCSBCCTTSSCCBSCHHHHHHHHHH--HCCCCS----------------------EE------------CTTTCCE
T ss_pred ccCCCCCeECCCCCceeCCHHHHHHHHHH--cCCCCC----------------------EE------------CCCCCch
Confidence 35689999999999999999999999999 876543 32 4456666
Q ss_pred cCChhhHHHHHHHhcCCCCc
Q 024455 88 FDSPSSLIKHKEACSLSAPV 107 (267)
Q Consensus 88 F~~~~~L~~H~~~h~~~~~~ 107 (267)
|...+.|..|+++|++++||
T Consensus 55 f~~~~~L~~H~~~H~~~kp~ 74 (74)
T 2lce_A 55 FNRPANLKTHTRIHSGEKPY 74 (74)
T ss_dssp ESCHHHHHHHHHHHCCSCCC
T ss_pred hCCHHHHHHHHHhcCCCCCC
Confidence 77777777888888888775
No 56
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.35 E-value=7.6e-13 Score=90.85 Aligned_cols=53 Identities=25% Similarity=0.419 Sum_probs=47.6
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (267)
.+++++|.|++|++.|.++..|..|+++ |++++| .|++|++.|.+..+|.+|+
T Consensus 23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~--H~~~k~~~C~~C~k~F~~~~~L~~H~ 76 (85)
T 2lv2_A 23 SASAECHLCPVCGESFASKGAQERHLRL--LHAAQVFPCKYCPATFYSSPGLTRHI 76 (85)
T ss_dssp CCCCTTEECTTSCCEESSHHHHHHHHHT--TSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred CCCCCCEECCCCCCCcCcHHHHhhhhhh--ccCCCccCCCCCCCEeCCHHHHHHhC
Confidence 3578899999999999999999999999 999888 8888888888888888886
No 57
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.33 E-value=1.2e-12 Score=86.35 Aligned_cols=52 Identities=31% Similarity=0.496 Sum_probs=37.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhh
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (267)
.+++++|.|+.|++.|.....|..|+++ |+++++ .|+.|++.|.+...|..|
T Consensus 4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C~~~f~~~~~L~~H 56 (70)
T 1x5w_A 4 GSSGHPEKCSECSYSCSSKAALRIHERI--HCTDRPFKCNYCSFDTKQPSNLSKH 56 (70)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHGG--GCCSCSEECSSSSCEESSHHHHHHH
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCEeCCCCCCccCCHHHHHHH
Confidence 5689999999999999999999999999 887655 444444444443333333
No 58
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=99.33 E-value=4.8e-13 Score=84.49 Aligned_cols=51 Identities=31% Similarity=0.587 Sum_probs=41.4
Q ss_pred CCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc
Q 024455 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (267)
|+++|.|+.|++.|.+...|..|+++ |+++++ .|+.|++.|.+...|..|+
T Consensus 1 g~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 52 (57)
T 3uk3_C 1 GSSSRECSYCGKFFRSNYYLNIHLRT--HTGEKPYKCEFCEYAAAQKTSLRYHL 52 (57)
T ss_dssp ----CBCTTTCCBCSCHHHHHHHHHH--HHCCCCEECSSSSCEESSHHHHHHHH
T ss_pred CCCCccCCCCcchhCChHHHHHHHHH--cCCCCCcCCCCCcchhCCHHHHHHHH
Confidence 57899999999999999999999999 988877 8888877777777777775
No 59
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=99.32 E-value=4.7e-13 Score=90.98 Aligned_cols=70 Identities=27% Similarity=0.405 Sum_probs=62.2
Q ss_pred CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc---ccccCcch
Q 024455 45 KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNA 116 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~f~~~ 116 (267)
.|+.|++.|.+...|..|+ .++|. |+.|++.|.....|..|+++|+++++|. |++.|...
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 70 (82)
T 2kmk_A 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYP------------CQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQS 70 (82)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHTCCCEE------------CSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSH
T ss_pred cCCCCcccccCchhHHHHHHHcCCCCCee------------CCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCCh
Confidence 7999999999999999998 34444 6678888999999999999999999997 89999999
Q ss_pred hhhhhhcccc
Q 024455 117 ESQKKISGAI 126 (267)
Q Consensus 117 ~~l~~H~~~~ 126 (267)
..|..|++.+
T Consensus 71 ~~l~~H~~~H 80 (82)
T 2kmk_A 71 SNLITHSRKH 80 (82)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998654
No 60
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.32 E-value=1.8e-12 Score=88.92 Aligned_cols=27 Identities=30% Similarity=0.468 Sum_probs=16.7
Q ss_pred CCCCccccccCccccCChHHHHHHHhH
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKI 36 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (267)
+++++|.|+.|++.|.....|..|++.
T Consensus 11 ~~~k~~~C~~C~~~f~~~~~l~~H~~~ 37 (86)
T 1x6h_A 11 TGEKPYACSHCDKTFRQKQLLDMHFKR 37 (86)
T ss_dssp CCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCCCCCcCCCCCCccCCHHHHHHHHHH
Confidence 355666666666666666666666655
No 61
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=99.32 E-value=7.8e-13 Score=91.56 Aligned_cols=75 Identities=20% Similarity=0.472 Sum_probs=64.7
Q ss_pred CCC-Ccc--cchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc---cc
Q 024455 42 HQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FE 110 (267)
Q Consensus 42 ~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~ 110 (267)
+++ .|+ .|++.|.+...|..|+ .++|. |+.|++.|.+...|..|+++|+++++|. |+
T Consensus 2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~ 69 (90)
T 1a1h_A 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQ------------CRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69 (90)
T ss_dssp -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEE------------CTTTCCEESCHHHHHHHHHHHHCCCCEECTTTC
T ss_pred CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCcc------------CCCCCcccCCHHHHHHHHHHcCCCCCccCCCCC
Confidence 466 898 6999999999999998 33444 6778889999999999999999999997 89
Q ss_pred ccCcchhhhhhhcccccc
Q 024455 111 KTLSNAESQKKISGAIDE 128 (267)
Q Consensus 111 ~~f~~~~~l~~H~~~~~~ 128 (267)
+.|.....|..|++.+.+
T Consensus 70 ~~f~~~~~l~~H~~~H~~ 87 (90)
T 1a1h_A 70 RKFARSDERKRHTKIHLR 87 (90)
T ss_dssp CEESSHHHHHHHHGGGGC
T ss_pred chhCCHHHHHHHHHHhcc
Confidence 999999999999977654
No 62
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.32 E-value=6.7e-13 Score=95.65 Aligned_cols=77 Identities=18% Similarity=0.275 Sum_probs=68.0
Q ss_pred CCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc---c
Q 024455 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---F 109 (267)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C 109 (267)
|+++++ .| .|++.|.+...|..|+ .++|. |+.|++.|.....|..|+++|+++++|. |
T Consensus 5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C 71 (110)
T 2csh_A 5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYG------------CGVCGKKFKMKHHLVGHMKIHTGIKPYECNIC 71 (110)
T ss_dssp CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEE------------CTTTSCEESSSHHHHHHHTTTCCCCCEECSSS
T ss_pred CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCcc------------CCCCCcccCCHHHHHHHHHHcCCCCCeeCCCC
Confidence 899999 99 9999999999999998 23443 6778889999999999999999999996 8
Q ss_pred cccCcchhhhhhhcccccc
Q 024455 110 EKTLSNAESQKKISGAIDE 128 (267)
Q Consensus 110 ~~~f~~~~~l~~H~~~~~~ 128 (267)
++.|.....|..|++.+..
T Consensus 72 ~~~f~~~~~l~~H~~~~~~ 90 (110)
T 2csh_A 72 AKRFMWRDSFHRHVTSCTK 90 (110)
T ss_dssp CCEESCHHHHHHHHHHHHH
T ss_pred cchhcCHHHHHHHHHHccc
Confidence 9999999999999976543
No 63
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=4.2e-13 Score=94.89 Aligned_cols=72 Identities=18% Similarity=0.329 Sum_probs=58.6
Q ss_pred ccCChHHHHHHHhHhcCCCCCC-CcccchhhcC-CHHHHHhhc---C---CCCCCCcCCcccccccccccccccCChhhH
Q 024455 23 QFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSK-SFESLREHL---T---GPLSKAHCSGIFSDRGCNLCMNIFDSPSSL 94 (267)
Q Consensus 23 ~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~-~~~~l~~H~---~---~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L 94 (267)
.+.....+..|+++ |+++++ .|.+|++.|. +...|..|+ . ++|. |++|++.|.....|
T Consensus 5 s~~~~~~~~~h~~~--h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~------------C~~C~k~F~~~~~L 70 (98)
T 2gqj_A 5 SSGPGGPEEQWQRA--IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALK------------CQHCRKQFKSKAGL 70 (98)
T ss_dssp CCCCCCSCSHHHHT--TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHS------------CSSSCCCCSCHHHH
T ss_pred CCCCCCcHHHHHHH--hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEE------------CCCCCCccCCHHHH
Confidence 34455667788888 888888 9999999999 899999988 2 2444 66788899999999
Q ss_pred HHHHHHhcCCCCcc
Q 024455 95 IKHKEACSLSAPVP 108 (267)
Q Consensus 95 ~~H~~~h~~~~~~~ 108 (267)
..|+++|++++|..
T Consensus 71 ~~H~~~h~~~kp~~ 84 (98)
T 2gqj_A 71 NYHTMAEHSAKPSD 84 (98)
T ss_dssp HHHHHHHSCSCSSC
T ss_pred HHHHHHHcCCCCCC
Confidence 99999999999864
No 64
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=99.29 E-value=3.1e-13 Score=100.35 Aligned_cols=101 Identities=17% Similarity=0.139 Sum_probs=63.1
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCC---CCCC-CcccchhhcC------CHHHHHhhc----CCCCCCCcCCcc
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHS---VHQP-KCAVCQKLSK------SFESLREHL----TGPLSKAHCSGI 75 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~---~~~~-~C~~C~~~f~------~~~~l~~H~----~~~~~C~~C~k~ 75 (267)
+|.|+|.|..++-.. ...+..|.+. |. .++. .|++|++.|. ....|..|+ .++|.
T Consensus 8 ~~~k~~~~~~k~~~~--~~s~ee~~~~--~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~------- 76 (129)
T 2wbt_A 8 SGSKKYLSNHKGIFI--HVTLEELKRY--HQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFV------- 76 (129)
T ss_dssp TTCCGGGGCSSCEEE--ECCHHHHHHH--TTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEE-------
T ss_pred ccccccccccCCeee--eecHHhhhcc--ccCChhhCcccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeE-------
Confidence 477888776544322 1223334333 22 1223 6777766654 566676666 44554
Q ss_pred cccccccccccccCChhhHHHHHHHhcCCCCcc---ccccCcchhhhhhhcccccc
Q 024455 76 FSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAIDE 128 (267)
Q Consensus 76 f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~f~~~~~l~~H~~~~~~ 128 (267)
|++||+.|...+.|..|+++| ++||. |++.|.....|..|++.+++
T Consensus 77 -----C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~ 125 (129)
T 2wbt_A 77 -----CPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN 125 (129)
T ss_dssp -----CTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred -----CCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence 455677777778888888887 77776 77888888888888765544
No 65
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.28 E-value=3.2e-12 Score=89.39 Aligned_cols=74 Identities=22% Similarity=0.319 Sum_probs=64.5
Q ss_pred CCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCC--CCcc--
Q 024455 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLS--APVP-- 108 (267)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~--~~~~-- 108 (267)
.+++++ .|..|++.|.+...|..|+ .++|. |+.|++.|.....|..|+++|+++ ++|.
T Consensus 2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~ 69 (95)
T 2yt9_A 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYS------------CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69 (95)
T ss_dssp CCCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEE------------CSSSCCEESCHHHHHHHHHHHCCCCCSSBCCS
T ss_pred CCCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCc------------CCCCCCccCCHHHHHHHHHHhcCCCCCceECC
Confidence 356777 9999999999999999998 23343 677888999999999999999987 8886
Q ss_pred -ccccCcchhhhhhhcc
Q 024455 109 -FEKTLSNAESQKKISG 124 (267)
Q Consensus 109 -C~~~f~~~~~l~~H~~ 124 (267)
|++.|.....|..|++
T Consensus 70 ~C~~~f~~~~~L~~H~~ 86 (95)
T 2yt9_A 70 SCGKGFSRPDHLNGHIK 86 (95)
T ss_dssp SSCCCBSSHHHHHHHHH
T ss_pred CccchhCCHHHHHHHHH
Confidence 8999999999999985
No 66
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.28 E-value=9.1e-13 Score=90.42 Aligned_cols=78 Identities=18% Similarity=0.307 Sum_probs=59.4
Q ss_pred HHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhcCCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCc
Q 024455 29 HLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPV 107 (267)
Q Consensus 29 ~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~ 107 (267)
+|..|+++ |+++++ .|..|++.|.+...|..|+.....-..-.+. ..|+.|++.|.....|..|+++|++++++
T Consensus 2 s~~~H~~~--H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~---~~C~~C~~~f~~~~~L~~H~~~h~~~~~~ 76 (86)
T 1x6h_A 2 SSGSSGRT--HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA---FVCSKCGKTFTRRNTMARHADNCAGPDGV 76 (86)
T ss_dssp TTTCCSTT--CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCC---EECSSSCCEESCHHHHHHHHHHCCCCCSC
T ss_pred Ccccccce--ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcc---eECCCCCChhCCHHHHHHHHHHccCCCCc
Confidence 45678999 999999 9999999999999999998100000000001 13778899999999999999999999998
Q ss_pred cccc
Q 024455 108 PFEK 111 (267)
Q Consensus 108 ~C~~ 111 (267)
.|..
T Consensus 77 ~~~~ 80 (86)
T 1x6h_A 77 EGEN 80 (86)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 8543
No 67
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.26 E-value=2.7e-12 Score=85.23 Aligned_cols=52 Identities=31% Similarity=0.594 Sum_probs=37.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhh
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (267)
.+++++|.|+.|++.|.....|..|+++ |.++++ .|++|++.|.+...|..|
T Consensus 9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~~~~~C~~C~~~f~~~~~L~~H 61 (72)
T 1x6e_A 9 HSGEKPYGCVECGKAFSRSSILVQHQRV--HTGEKPYKCLECGKAFSQNSGLINH 61 (72)
T ss_dssp TTTCCCEECSSSCCEESSHHHHHHHHHG--GGCSCCEECSSSCCEESSHHHHHHH
T ss_pred cCCCCCccCCCCCCccCCHHHHHHHHHh--cCCCCCeECCCCCcccCCHHHHHHH
Confidence 3688999999999999999999999998 877655 444444444444444444
No 68
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.26 E-value=3e-12 Score=86.16 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=43.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcc---ccccCcchhhhhhhcccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAIDE 128 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~f~~~~~l~~H~~~~~~ 128 (267)
|++|++.|.....|..|+++|+++++|. |++.|.....|..|+..+.+
T Consensus 21 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 6778889999999999999999999996 89999999999999977654
No 69
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=1.6e-11 Score=85.82 Aligned_cols=69 Identities=17% Similarity=0.248 Sum_probs=55.2
Q ss_pred ccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhcCCCCCCCcCCcccccccccccccccCChh
Q 024455 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPS 92 (267)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~~~F~~~~ 92 (267)
.|.|+.|++.|.....|..|++++ |+++++ .+..|. .| .|+.|++.|...+
T Consensus 25 ~~~C~~C~k~f~~~~~L~~H~~~~-H~~~~~~~~~~c~---------------~~------------~C~~C~k~f~~~~ 76 (95)
T 2ej4_A 25 SRPKKSCDRTFSTMHELVTHVTME-HVGGPEQNNHVCY---------------WE------------ECPREGKSFKAKY 76 (95)
T ss_dssp SSSCCCCCCCCSSHHHHHHHHHHT-TTCCTTCSCCCCC---------------CT------------TCSSTTCCCSSHH
T ss_pred CCcccccccccCCHHHHHHHHHHh-ccCCCCCCcccee---------------cc------------CCCCCCcccCCHH
Confidence 467999999999999999999863 776655 333331 12 3788999999999
Q ss_pred hHHHHHHHhcCCCCcccc
Q 024455 93 SLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 93 ~L~~H~~~h~~~~~~~C~ 110 (267)
.|..|+++|++++||.|.
T Consensus 77 ~L~~H~~~H~~~k~~~C~ 94 (95)
T 2ej4_A 77 KLVNHIRVHTGEKSGPSS 94 (95)
T ss_dssp HHHHHHHHHHTCCCCSSC
T ss_pred HHHHHHHhcCCCCCCCCC
Confidence 999999999999999985
No 70
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=99.24 E-value=2.9e-12 Score=83.48 Aligned_cols=53 Identities=17% Similarity=0.397 Sum_probs=40.8
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcC-CCCCC-CcccchhhcCCHHHHHhhc
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYH-SVHQP-KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H-~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (267)
++++||.|+.|++.|.+...|..|++++ | +++++ .|+.|++.|.+.+.|..|+
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~-H~~~~~~~~C~~C~k~f~~~~~L~~H~ 60 (66)
T 2drp_A 6 EGEHTYRCKVCSRVYTHISNFCRHYVTS-HKRNVKVYPCPFCFKEFTRKDNMTAHV 60 (66)
T ss_dssp EETTEEECTTTCCEESSHHHHHHHHHHH-SSSSCCCEECTTTCCEESCHHHHHHHH
T ss_pred CCCcceECCCCcchhCCHHHHHHHHHHH-cCCCCcCeECCCCCCccCCHHHHHHHH
Confidence 5789999999999999999999999873 5 56666 6666666666666666664
No 71
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=99.24 E-value=4.7e-12 Score=80.79 Aligned_cols=49 Identities=27% Similarity=0.631 Sum_probs=44.1
Q ss_pred CccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (267)
+||.|+.|++.|.+...|..|+++ |+++++ .|+.|++.|.+...|..|+
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 50 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRS--HTNEKPYPCGLCNRAFTRRDLLIRHA 50 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHT--TTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred CcCcCCCCccccCCHHHHHHHHHH--hCCCCCccCCCCCCccCCHHHHHHHH
Confidence 589999999999999999999999 998888 8888888888888888885
No 72
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.24 E-value=8.2e-12 Score=83.28 Aligned_cols=48 Identities=17% Similarity=0.267 Sum_probs=43.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcc---ccccCcchhhhhhhcccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKISGAIDE 128 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~f~~~~~l~~H~~~~~~ 128 (267)
|+.|++.|...+.|..|+++|+++++|. |++.|.....|..|++.+.+
T Consensus 20 C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 6778899999999999999999999997 89999999999999977654
No 73
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.24 E-value=5.8e-12 Score=88.69 Aligned_cols=73 Identities=16% Similarity=0.287 Sum_probs=60.0
Q ss_pred cccCChHHHHHHHhHhcCCCCCC-Ccccchhhc-CCHHHHHhhc----CCCCCCCcCCcccccccccccccccCChhhHH
Q 024455 22 KQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLS-KSFESLREHL----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLI 95 (267)
Q Consensus 22 k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f-~~~~~l~~H~----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~ 95 (267)
..|.....|..|++. |.++++ .|+.|++.| .+..+|..|+ .++|. |++||+.|...+.|.
T Consensus 14 ~~~~~~~~~~~~~~~--~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~------------C~~Cgk~F~~~~~L~ 79 (96)
T 2ctd_A 14 PVYAAGSLEEQWYLE--IVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFT------------CHHCGKQLRSLAGMK 79 (96)
T ss_dssp CSSCTTCHHHHHHHH--HHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCC------------CSSSCCCCSSHHHHH
T ss_pred CCCCCchHHHHHHHH--hcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeE------------CCCCCCeeCCHHHHH
Confidence 356778889999999 888888 999999999 9999999998 34444 677888899999999
Q ss_pred HH-HHHhcCCCCcc
Q 024455 96 KH-KEACSLSAPVP 108 (267)
Q Consensus 96 ~H-~~~h~~~~~~~ 108 (267)
.| +++|+++..++
T Consensus 80 ~H~~~~H~~~p~~~ 93 (96)
T 2ctd_A 80 YHVMANHNSLPSGP 93 (96)
T ss_dssp HHHHHHTCCCSSCS
T ss_pred HHhHHhcCCCCCCC
Confidence 99 88997654433
No 74
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=3.4e-12 Score=86.03 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=26.9
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCC
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSV 41 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~ 41 (267)
+++++|.|+.|++.|.....|..|+++ |.+
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~ 32 (78)
T 2d9h_A 3 SGSSGLQCEICGFTCRQKASLNWHQRK--HAE 32 (78)
T ss_dssp CSCCCEECSSSCCEESSHHHHHHHHHH--HHH
T ss_pred CCCcCeECCCCCCeeCCHHHHHHHHHH--hhc
Confidence 588999999999999999999999998 764
No 75
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=99.21 E-value=8.2e-12 Score=86.13 Aligned_cols=72 Identities=18% Similarity=0.274 Sum_probs=62.0
Q ss_pred Cccc--chhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc---ccccCc
Q 024455 45 KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLS 114 (267)
Q Consensus 45 ~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~f~ 114 (267)
.|+. |++.|.+...|..|+ .++|.|+ .+.|++.|.....|..|+++|+++++|. |++.|.
T Consensus 7 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~----------~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 76 (89)
T 2wbs_A 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCD----------WDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFS 76 (89)
T ss_dssp ECCSTTTCCEESSHHHHHHHHTTSCSSCCEECC----------STTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred eCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCC----------CCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccC
Confidence 8998 999999999999998 2344441 1368999999999999999999999997 899999
Q ss_pred chhhhhhhcccc
Q 024455 115 NAESQKKISGAI 126 (267)
Q Consensus 115 ~~~~l~~H~~~~ 126 (267)
....|..|++.+
T Consensus 77 ~~~~l~~H~~~H 88 (89)
T 2wbs_A 77 RSDHLALHMKRH 88 (89)
T ss_dssp SHHHHHHHGGGG
T ss_pred CHHHHHHHHHhh
Confidence 999999998643
No 76
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=99.20 E-value=1.1e-11 Score=78.19 Aligned_cols=48 Identities=25% Similarity=0.528 Sum_probs=38.8
Q ss_pred ccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc
Q 024455 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (267)
||.|+.|++.|.+...|..|+++ |+++++ .|+.|++.|.+..+|..|+
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 49 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRT--HTDVRPYHCTYCNFSFKTKGNLTKHM 49 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH--TSSCCCEECSSSSCEESSHHHHHHHH
T ss_pred CCcCCCCcCcCCCHHHHHHHHHh--cCCCCCccCCCCCchhcCHHHHHHHH
Confidence 68999999999999999999999 988776 6666666666666666665
No 77
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=99.20 E-value=1.2e-11 Score=87.19 Aligned_cols=75 Identities=17% Similarity=0.272 Sum_probs=64.0
Q ss_pred CCC-Cccc--chhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc---cc
Q 024455 42 HQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FE 110 (267)
Q Consensus 42 ~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~ 110 (267)
.++ .|.. |++.|.....|..|+ .++|.|. ++.|++.|.....|..|+++|+++++|. |+
T Consensus 13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~----------~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~ 82 (100)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCT----------WEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82 (100)
T ss_dssp CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECC----------SSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSC
T ss_pred CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCC----------CCCCCCccCCHHHHHHHHHHhCCCCCeECCCCc
Confidence 344 8886 999999999999998 3456552 2468899999999999999999999997 89
Q ss_pred ccCcchhhhhhhcccc
Q 024455 111 KTLSNAESQKKISGAI 126 (267)
Q Consensus 111 ~~f~~~~~l~~H~~~~ 126 (267)
+.|.....|..|++.+
T Consensus 83 ~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 83 RSFSRSDHLALHMKRH 98 (100)
T ss_dssp CBCSSHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHh
Confidence 9999999999998654
No 78
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.18 E-value=1.2e-11 Score=81.50 Aligned_cols=58 Identities=33% Similarity=0.485 Sum_probs=50.4
Q ss_pred CCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc
Q 024455 39 HSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (267)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~ 108 (267)
|+++++ .|+.|++.|.+...|..|+ .++|. |+.|++.|.....|..|+++|++++|.+
T Consensus 4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~------------C~~C~~~f~~~~~L~~H~~~h~~~~p~p 67 (70)
T 1x5w_A 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFK------------CNYCSFDTKQPSNLSKHMKKFHGDMSGP 67 (70)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEE------------CSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEe------------CCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence 788888 9999999999999999998 23343 6778889999999999999999998854
No 79
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.17 E-value=2.2e-11 Score=76.09 Aligned_cols=46 Identities=35% Similarity=0.574 Sum_probs=42.3
Q ss_pred CCCCCCccccccCccccCChHHHHHHHh-HhcCCCCCC-CcccchhhcCC
Q 024455 8 PKRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP-KCAVCQKLSKS 55 (267)
Q Consensus 8 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~H~~~~~-~C~~C~~~f~~ 55 (267)
+.+++++|.|+.|++.|.....|..|++ + |+++++ .|++|++.|.+
T Consensus 6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~--H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQV--HTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp CCCSSCCEECSSSCCEESSHHHHHHHHHHT--SCCCCCCCSSSSCCSSCC
T ss_pred CCCCCCCeECCCCCcccCCHHHHHHHHHHh--cCCCCCccCCCCCCCCCC
Confidence 3568999999999999999999999997 7 999998 99999999976
No 80
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.17 E-value=1.8e-11 Score=82.24 Aligned_cols=26 Identities=15% Similarity=0.404 Sum_probs=17.6
Q ss_pred CCCCccccccCccccCChHHHHHHHh
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMK 35 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~ 35 (267)
++++||.|+.|++.|.+...|..|++
T Consensus 11 ~~~k~~~C~~C~k~f~~~~~L~~H~~ 36 (77)
T 2ct1_A 11 SGEKPYECYICHARFTQSGTMKMHIL 36 (77)
T ss_dssp SCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred CCCCCeECCCcCchhCCHHHHHHHHH
Confidence 45666777777777777777777765
No 81
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.16 E-value=1.4e-11 Score=86.64 Aligned_cols=50 Identities=22% Similarity=0.409 Sum_probs=47.6
Q ss_pred CCCccccccCcccc-CChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhh-c
Q 024455 11 STARHKCVACYKQF-KRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH-L 63 (267)
Q Consensus 11 ~~k~~~C~~C~k~f-~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H-~ 63 (267)
++++|.|+.|++.| .++..|..|+++ | ++++ .|.+||+.|.+.+.|..| +
T Consensus 31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~--h-~~k~~~C~~Cgk~F~~~~~L~~H~~ 83 (96)
T 2ctd_A 31 DKGSVSCPTCQAVGRKTIEGLKKHMEN--C-KQEMFTCHHCGKQLRSLAGMKYHVM 83 (96)
T ss_dssp HTSCEECTTTCSCEESSHHHHHHHHHH--H-CCCCCCCSSSCCCCSSHHHHHHHHH
T ss_pred CCCCcCCCCCCCCcccCHHHHHHHHHH--H-CCCCeECCCCCCeeCCHHHHHHHhH
Confidence 47889999999999 999999999999 9 8888 999999999999999999 6
No 82
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.15 E-value=8.2e-14 Score=92.61 Aligned_cols=69 Identities=17% Similarity=0.141 Sum_probs=58.4
Q ss_pred hHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhcCCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCC
Q 024455 27 KDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 27 ~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
+..|..|+++ |+++++ .|+.||+.|.+.+.|.. .++|. |+.||+.|...+.|..|+++|++++
T Consensus 3 ~~~l~~H~~~--h~~~~~~~C~~C~k~f~~~~~l~~--~~~~~------------C~~C~~~f~~~~~l~~H~~~H~~~~ 66 (73)
T 2ctu_A 3 SGSSGKRQKI--HLGDRSQKCSKCGIIFIRRSTLSR--RKTPM------------CEKCRKDSCQEAALNKDEGNESGKK 66 (73)
T ss_dssp CCSCCCCCCC--CCCCSEEECSSSCCEEECCCCCCC--SSSCC------------CHHHHHTCSCCCSSCCCSSCCCCCC
T ss_pred chhHHHHHHH--hCCCCCeeCCcccchhCCHHHhCc--CCCCC------------CCCCChhhcCHHHHHHHHHhhcCCC
Confidence 4567889998 999998 99999999999888776 33443 7789999999999999999999999
Q ss_pred Cccccc
Q 024455 106 PVPFEK 111 (267)
Q Consensus 106 ~~~C~~ 111 (267)
||.|+.
T Consensus 67 ~~~C~~ 72 (73)
T 2ctu_A 67 TSGPSS 72 (73)
T ss_dssp CSSCCC
T ss_pred CCCCCC
Confidence 999863
No 83
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=99.14 E-value=3.5e-12 Score=94.56 Aligned_cols=79 Identities=18% Similarity=0.219 Sum_probs=66.2
Q ss_pred CCCccccccCccccC------ChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc---CCCCCCCcCCccccccc
Q 024455 11 STARHKCVACYKQFK------RKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRG 80 (267)
Q Consensus 11 ~~k~~~C~~C~k~f~------~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~C~~C~k~f~~~~ 80 (267)
.++++.|+.|++.|. ....|..|+ . |++++| .|++||+.|.+..+|..|+ .++|.
T Consensus 38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~--h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~------------ 102 (129)
T 2wbt_A 38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-A--SKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV------------ 102 (129)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-H--HHHHCSEECTTTCCEESSHHHHHHHHHHTCCCCB------------
T ss_pred hhCcccchhhhcccCCCcccCCHHHHHHHH-H--hCCCCCeECCCCCcccCCHhHHHHHHHHCCCCCC------------
Confidence 456788999887765 667777777 5 778888 9999999999999999998 34544
Q ss_pred ccccccccCChhhHHHHHHHhcCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLS 104 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~ 104 (267)
|+.||+.|...+.|..|+++|++.
T Consensus 103 C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 103 CPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp CTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CCCCCcccCCHHHHHHHHHHHCCc
Confidence 677889999999999999999976
No 84
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.14 E-value=6.6e-12 Score=84.42 Aligned_cols=61 Identities=20% Similarity=0.332 Sum_probs=51.9
Q ss_pred HHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc----C---CCCCCCcCCcccccccccccccccCChhhHHHHHHHh
Q 024455 30 LIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL----T---GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEAC 101 (267)
Q Consensus 30 l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~----~---~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h 101 (267)
|.+|+++ |+++++ .|++|++.|.+..+|..|+ . ++|. |+.|++.|...+.|..|+++|
T Consensus 3 ~~~H~~~--H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~------------C~~C~~~f~~~~~L~~H~~~~ 68 (77)
T 2ct1_A 3 SGSSGRT--HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFH------------CPHCDTVIARKSDLGVHLRKQ 68 (77)
T ss_dssp CCCCCCC--CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEE------------CSSSSCEESSHHHHHHHHHHT
T ss_pred CCccccc--cCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccC------------CCCCCCccCCHHHHHHHHHHh
Confidence 4568888 999999 9999999999999999997 1 2333 777889999999999999987
Q ss_pred cCC
Q 024455 102 SLS 104 (267)
Q Consensus 102 ~~~ 104 (267)
++.
T Consensus 69 H~~ 71 (77)
T 2ct1_A 69 HSY 71 (77)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 85
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.13 E-value=1.4e-11 Score=81.67 Aligned_cols=59 Identities=29% Similarity=0.467 Sum_probs=49.8
Q ss_pred HhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCC
Q 024455 34 MKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAP 106 (267)
Q Consensus 34 ~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~ 106 (267)
.++ |+++++ .|+.|++.|.+...|..|+ .++|. |++|++.|.....|..|+++|+++.+
T Consensus 6 ~~~--H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~------------C~~C~~~f~~~~~L~~H~~~H~~~~~ 70 (72)
T 1x6e_A 6 SGI--HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYK------------CLECGKAFSQNSGLINHQRIHTSGPS 70 (72)
T ss_dssp CCT--TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEE------------CSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred Ccc--cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeE------------CCCCCcccCCHHHHHHHHHhcCCCCC
Confidence 456 899999 9999999999999999998 33444 67788899999999999999987743
No 86
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.12 E-value=2e-11 Score=86.65 Aligned_cols=58 Identities=10% Similarity=0.060 Sum_probs=46.5
Q ss_pred ccccccccCChhhHHHHHH-Hh---cCCCCcc---ccccCcchhhhhhh-ccccccccccCCCceeeeeccccC
Q 024455 81 CNLCMNIFDSPSSLIKHKE-AC---SLSAPVP---FEKTLSNAESQKKI-SGAIDEKRTCRGPKAVAMDCEMVG 146 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~-~h---~~~~~~~---C~~~f~~~~~l~~H-~~~~~~~r~~~~~~~~~~dcE~~g 146 (267)
|+.||+.|..++.|..|++ +| .+++||. |++.|...+.|..| ++.+.+. ..+.|..+.
T Consensus 21 C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htge--------kpy~C~~~~ 86 (102)
T 2ghf_A 21 CKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE--------ENFKLTMVK 86 (102)
T ss_dssp CSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTC--------CCEEEEECC
T ss_pred CCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCC--------CCeeCCccc
Confidence 7778899999999999998 58 5688996 99999999999999 6555432 346676644
No 87
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=99.12 E-value=3.6e-11 Score=79.81 Aligned_cols=53 Identities=26% Similarity=0.642 Sum_probs=46.6
Q ss_pred CCCCCccccc--cCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc
Q 024455 9 KRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 9 ~~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (267)
.+++++|.|+ .|++.|.....|..|+++ |.++++ .|+.||+.|.+...|..|+
T Consensus 14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 69 (73)
T 1f2i_G 14 VPKMRPYACPVESCDRRFSRSDELTRHIRI--HTGQKPFQCRICMRNFSRSDHLTTHI 69 (73)
T ss_dssp CCCCCCEECSSTTBCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred CCCCCccCCcCCCCCCccCCHHHHHHHHHh--hCCCCCeECCCCCchhCCHHHHHHHH
Confidence 4688999997 699999999999999999 888888 8888888888888888886
No 88
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=1e-11 Score=87.65 Aligned_cols=52 Identities=25% Similarity=0.389 Sum_probs=49.5
Q ss_pred CCCCccccccCccccC-ChHHHHHHHhHhcCCC-CCC-CcccchhhcCCHHHHHhhc
Q 024455 10 RSTARHKCVACYKQFK-RKDHLIEHMKISYHSV-HQP-KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~-~~~~l~~H~~~~~H~~-~~~-~C~~C~~~f~~~~~l~~H~ 63 (267)
+++++|.|+.|++.|. ....|..|+++ |++ +++ .|.+|++.|.+...|.+|+
T Consensus 20 ~~~~~~~C~~C~k~f~~~~~~L~~H~~~--h~~~~~~~~C~~C~k~F~~~~~L~~H~ 74 (98)
T 2gqj_A 20 HERGEAVCPTCNVVTRKTLVGLKKHMEV--CQKLQDALKCQHCRKQFKSKAGLNYHT 74 (98)
T ss_dssp TTTSCCCCTTTCCCCSSCSHHHHHHHHH--HHHHHHHHSCSSSCCCCSCHHHHHHHH
T ss_pred ccCCCcCCCCCCCChhhhHHHHHHHHHH--HcCCCCCEECCCCCCccCCHHHHHHHH
Confidence 5789999999999999 99999999999 887 778 9999999999999999998
No 89
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=99.08 E-value=8e-12 Score=86.28 Aligned_cols=73 Identities=19% Similarity=0.486 Sum_probs=61.5
Q ss_pred CCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCCCcc---cccc
Q 024455 42 HQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKT 112 (267)
Q Consensus 42 ~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~ 112 (267)
++| .|+.|++.|.+.+.|..|+ .++|. |+.|++.|...+.|..|+++|++ .++. |++.
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~------------C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~ 67 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA------------CDICGRKFARSDERKRHRDIQHI-LPILEDKVEEL 67 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE------------CTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCcc------------CCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHH
Confidence 356 9999999999999999998 34554 66788889999999999999985 5664 9999
Q ss_pred Ccchhhhhhhccccc
Q 024455 113 LSNAESQKKISGAID 127 (267)
Q Consensus 113 f~~~~~l~~H~~~~~ 127 (267)
|.....|..|+...+
T Consensus 68 f~~~~~L~~H~~~~h 82 (88)
T 1llm_C 68 LSKNYHLENEVARLK 82 (88)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHH
Confidence 999999999996543
No 90
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.08 E-value=9.5e-11 Score=71.14 Aligned_cols=43 Identities=26% Similarity=0.352 Sum_probs=39.6
Q ss_pred CCCCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccchh
Q 024455 7 LPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQK 51 (267)
Q Consensus 7 ~~~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~ 51 (267)
.+.+++++|.|+.|++.|.+...|..|+++ |++++| .|++|++
T Consensus 5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C~k 48 (48)
T 2epr_A 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLS--HSGEKPYSSGPSSG 48 (48)
T ss_dssp SCCCCCCSEEETTTTEEESSHHHHHHHGGG--SCSCCCCCSCCCCC
T ss_pred CCCCCCcCeeCCCCCcccCCHHHHHHHHHh--cCCCCCccCCCCCC
Confidence 345789999999999999999999999999 999998 9999985
No 91
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.07 E-value=9.6e-11 Score=78.85 Aligned_cols=63 Identities=19% Similarity=0.253 Sum_probs=50.0
Q ss_pred CCCCCC-Cccc--chhhcCCHHHHHhhc------CCCCCCCcCCcccccccccc--cccccCChhhHHHHHHHhcCCCCc
Q 024455 39 HSVHQP-KCAV--CQKLSKSFESLREHL------TGPLSKAHCSGIFSDRGCNL--CMNIFDSPSSLIKHKEACSLSAPV 107 (267)
Q Consensus 39 H~~~~~-~C~~--C~~~f~~~~~l~~H~------~~~~~C~~C~k~f~~~~C~~--C~~~F~~~~~L~~H~~~h~~~~~~ 107 (267)
.+++++ .|.. |++.|.+..+|..|+ .++|. |+. |++.|...+.|..|+++|++++||
T Consensus 2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~------------C~~~~C~k~f~~~~~L~~H~~~H~~~~~~ 69 (79)
T 2dlk_A 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFS------------CPEPACGKSFNFKKHLKEHMKLHSDTRDY 69 (79)
T ss_dssp CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEE------------CSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeE------------CCCCCCcCccCCHHHHHHHHHHhCCCCCe
Confidence 355666 6665 999999999999997 23444 556 888999999999999999999999
Q ss_pred c---ccccC
Q 024455 108 P---FEKTL 113 (267)
Q Consensus 108 ~---C~~~f 113 (267)
. |++.|
T Consensus 70 ~C~~C~k~F 78 (79)
T 2dlk_A 70 ICEFSGPSS 78 (79)
T ss_dssp SCCSSSCCC
T ss_pred eCCCCCCCC
Confidence 7 55555
No 92
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=99.05 E-value=8.1e-11 Score=80.20 Aligned_cols=70 Identities=21% Similarity=0.249 Sum_probs=58.5
Q ss_pred Cc--ccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccc--cccccCChhhHHHHHHHhcC---CCCcccccc
Q 024455 45 KC--AVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNL--CMNIFDSPSSLIKHKEACSL---SAPVPFEKT 112 (267)
Q Consensus 45 ~C--~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~--C~~~F~~~~~L~~H~~~h~~---~~~~~C~~~ 112 (267)
.| +.||+.|.+.+.|..|+ .++|. |+. |++.|...+.|..|+++|++ ..++.|++.
T Consensus 3 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~C~~~ 70 (85)
T 2j7j_A 3 VCHFENCGKAFKKHNQLKVHQFSHTQQLPYE------------CPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFV 70 (85)
T ss_dssp ECCSTTCCCEESSHHHHHHHHHHHHTTCCEE------------CCSTTCCCEESSHHHHHHHHHHHHSEECCSCSSCCCE
T ss_pred cCCCCCCCcccCCHHHHHHHHHHhCCCCCee------------CCCCCCcCccCCHHHHHHHHHHhCCCCCCCCCCCCCc
Confidence 68 89999999999999998 34554 555 88899999999999999998 333349999
Q ss_pred Ccchhhhhhhcccc
Q 024455 113 LSNAESQKKISGAI 126 (267)
Q Consensus 113 f~~~~~l~~H~~~~ 126 (267)
|.....|..|++.+
T Consensus 71 f~~~~~l~~H~~~h 84 (85)
T 2j7j_A 71 GKTWTLYLKHVAEC 84 (85)
T ss_dssp ESSHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHhc
Confidence 99999999998543
No 93
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=99.03 E-value=2.2e-10 Score=75.72 Aligned_cols=54 Identities=24% Similarity=0.523 Sum_probs=49.0
Q ss_pred CCCCCCcccccc--CccccCChHHHHHHHhHhcCCCCCC-Cccc--chhhcCCHHHHHhhc
Q 024455 8 PKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL 63 (267)
Q Consensus 8 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~--C~~~f~~~~~l~~H~ 63 (267)
..+..++|.|+. |++.|.....|..|+++ |+++++ .|.. |++.|.+...|..|+
T Consensus 11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~~~C~k~f~~~~~l~~H~ 69 (72)
T 2epa_A 11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRT--HTGEKPFSCSWKGCERRFARSDELSRHR 69 (72)
T ss_dssp CCCCCCCEECSSTTTCCEESSHHHHHHHHHH--HSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred CccccCceeCCCCCCccccCCHHHHHHHHHh--cCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence 356889999988 99999999999999999 999998 9964 999999999999986
No 94
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=99.00 E-value=8.3e-11 Score=76.38 Aligned_cols=55 Identities=15% Similarity=0.396 Sum_probs=45.0
Q ss_pred CCCCCC-CcccchhhcCCHHHHHhhcC-----CCCCCCcCCcccccccccccccccCChhhHHHHHHHhcC
Q 024455 39 HSVHQP-KCAVCQKLSKSFESLREHLT-----GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSL 103 (267)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~~-----~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~ 103 (267)
|+++++ .|+.||+.|.+..+|..|+. +..+. .|+.|++.|...+.|..|+++|++
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~----------~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVY----------PCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCE----------ECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCe----------ECCCCCCccCCHHHHHHHHHHHcC
Confidence 888888 99999999999999999971 11111 377888899999999999999876
No 95
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.97 E-value=3e-10 Score=67.78 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=37.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccch
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQ 50 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~ 50 (267)
.++++||.|+.|++.|..+..|..|+++ |+++++ .|+.||
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~~~C~~cg 45 (45)
T 2epq_A 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRS--HDGSVGKSGPSSG 45 (45)
T ss_dssp CSSCCSSEETTTTEECSCHHHHHHHHHH--HSCCCCCCCCCCC
T ss_pred cCCCCCCcCCCCCcccCCHHHHHHHHHH--ccCCCCCCCcCCC
Confidence 4689999999999999999999999999 999998 999996
No 96
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=98.96 E-value=2.9e-10 Score=71.40 Aligned_cols=46 Identities=30% Similarity=0.495 Sum_probs=25.9
Q ss_pred CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhc
Q 024455 45 KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACS 102 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~ 102 (267)
.|+.|++.|.+...|..|+ .++|. |+.|++.|...+.|..|+++|+
T Consensus 6 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 6 ECSYCGKFFRSNYYLNIHLRTHTGEKPYK------------CEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp BCTTTCCBCSCHHHHHHHHHHHHCCCCEE------------CSSSSCEESSHHHHHHHHHHHC
T ss_pred cCCCCcchhCChHHHHHHHHHcCCCCCcC------------CCCCcchhCCHHHHHHHHHHhc
Confidence 5666666666666666665 22333 3445555555666666666554
No 97
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.93 E-value=8.5e-10 Score=66.07 Aligned_cols=39 Identities=28% Similarity=0.443 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytn_A 7 GTGKKPYKCNECGKVFTQNSHLARHRGI--HTGEKPSGPSSG 46 (46)
T ss_dssp CSCCSSCBCTTTCCBCSSHHHHHHHGGG--TSCCCCCSCCCC
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHhhh--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99887
No 98
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=98.92 E-value=3.9e-10 Score=77.23 Aligned_cols=43 Identities=16% Similarity=0.271 Sum_probs=19.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcc---ccccCcchhhhhhhc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKIS 123 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~f~~~~~l~~H~ 123 (267)
|++||+.|.+.+.|..|+++|++++||+ |++.|.....|..|+
T Consensus 31 C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~ 76 (85)
T 2lv2_A 31 CPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI 76 (85)
T ss_dssp CTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred CCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence 4444444444444444444444444443 444444444444443
No 99
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=4.8e-10 Score=75.30 Aligned_cols=60 Identities=23% Similarity=0.430 Sum_probs=46.9
Q ss_pred CCCCCC-CcccchhhcCCHHHHHhhc---C---CCCCCCcCCcccccccccccccccCChhhHHHHHH-HhcCCCCcc
Q 024455 39 HSVHQP-KCAVCQKLSKSFESLREHL---T---GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKE-ACSLSAPVP 108 (267)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~---~---~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~-~h~~~~~~~ 108 (267)
|+++++ .|.+|++.|.+...|..|+ . +..+. .|++|++.|...+.|..|++ .|.++++..
T Consensus 2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~----------~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~ 69 (78)
T 2d9h_A 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRF----------PCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69 (78)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCE----------ECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCccc----------CCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence 889999 9999999999999999998 2 12221 36778889999999999995 555565543
No 100
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.92 E-value=1e-09 Score=65.67 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||.|+.|++.|.++..|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eq4_A 7 GTGEKLYNCKECGKSFSRAPCLLKHERL--HSGEKPSGPSSG 46 (46)
T ss_dssp SSCCCCCCBTTTTBCCSCHHHHHHHHHH--CCSSSCCCCCCC
T ss_pred CCCCCCeECCCCCCccCchHHHHHHHHh--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 99887
No 101
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.91 E-value=9.4e-10 Score=65.91 Aligned_cols=39 Identities=31% Similarity=0.423 Sum_probs=36.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytq_A 7 GAGEKPYGCSECGKAFSSKSYLIIHMRT--HSGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSCBCSSSCCBCSCHHHHHHHHTT--TCCSCSSCCCCC
T ss_pred cCCCCCcCCCccChhhCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 999998 99887
No 102
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.91 E-value=8.6e-10 Score=66.08 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2elz_A 7 GSVEKPYKCEDCGKGYNRRLNLDMHQRV--HMGEKTSGPSSG 46 (46)
T ss_dssp CCCCSSCBCSSSCCBCSSHHHHHHHGGG--GGSCCCCCSCCC
T ss_pred CCCCCCeeCcccCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 999998 99887
No 103
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.91 E-value=1.1e-09 Score=65.57 Aligned_cols=39 Identities=23% Similarity=0.389 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eoq_A 7 GTGEKPFKCDICGKSFCGRSRLNRHSMV--HTAEKPSGPSSG 46 (46)
T ss_dssp SSSSCSCCCSSSCCCCSSHHHHHHHHHH--TTCCCSSSCCCC
T ss_pred CCCCCCcCCCcCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3688999999999999999999999999 999998 99887
No 104
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=98.91 E-value=8.9e-10 Score=66.03 Aligned_cols=39 Identities=26% Similarity=0.512 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emk_A 7 GTGEKPYECKECGKAFSQTTHLIQHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CSSSCSCBCSSSCCBCSCHHHHHHHHHH--HSSCCCSSCCCC
T ss_pred cCCCCceECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 99887
No 105
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.91 E-value=8.5e-10 Score=66.11 Aligned_cols=39 Identities=31% Similarity=0.484 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2emf_A 7 GTGGKHFECTECGKAFTRKSTLSMHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSSSCCEECSSSCCEESCHHHHHHHGGG--TSCSSCSCCCCC
T ss_pred cCCCCCeECCCCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 99887
No 106
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=98.91 E-value=9.3e-10 Score=65.86 Aligned_cols=39 Identities=26% Similarity=0.380 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2el4_A 7 GTGVKPYGCSQCAKTFSLKSQLIVHQRS--HTGVKPSGPSSG 46 (46)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHGGG--SSSCCCSCCTTC
T ss_pred CCCCCceECCCCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99887
No 107
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.91 E-value=1e-09 Score=65.73 Aligned_cols=39 Identities=23% Similarity=0.399 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2epz_A 7 GTGEKPFDCIDCGKAFSDHIGLNQHRRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSBCCTTTCCCBSSHHHHHHHHTT--TTTCCCCSSCCC
T ss_pred cCCCCCeECCCCCceeCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3688999999999999999999999999 999998 99887
No 108
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=7.4e-10 Score=65.66 Aligned_cols=39 Identities=23% Similarity=0.414 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||.|+.|++.|.+++.|..|+++ |+++++ .|+.|
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 44 (44)
T 2emx_A 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQT--HAEEKPSGPSSG 44 (44)
T ss_dssp CSSCCCEECSSSSCEESSHHHHHHHHHH--HTSSCSCSCCCC
T ss_pred cCCCcCccCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3688999999999999999999999999 999998 99887
No 109
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.91 E-value=9.8e-10 Score=65.76 Aligned_cols=39 Identities=28% Similarity=0.463 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|+|+.|++.|.+++.|..|+++ |++++| .|+.|
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eoe_A 7 GTGEKPYKCNECGKVFTQNSHLANHQRI--HTGVKPSGPSSG 46 (46)
T ss_dssp CCCCCSSEETTTTEECSSHHHHHHHHGG--GSCCCSCSSCCC
T ss_pred CCCCCCeECCCcChhhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99887
No 110
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=1.1e-09 Score=65.61 Aligned_cols=39 Identities=23% Similarity=0.339 Sum_probs=36.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||.|+.|++.|.+.+.|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2enc_A 7 GSGEKPFKCEECGKGFYTNSQCYSHQRS--HSGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHH--SCCSSCCSSCCC
T ss_pred CCCCCCcCCCCCCCcCCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99887
No 111
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.90 E-value=9.5e-10 Score=65.86 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ene_A 7 GTGEKPYKCNECGKVFRHNSYLSRHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSSSEECSSSCCEESSHHHHHHHHTT--TCCCCCCSCCCC
T ss_pred CCCCCCeECCCCCchhCChHHHHHHHhh--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 999988 99887
No 112
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=98.90 E-value=9.9e-10 Score=65.78 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=35.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||+|+.|++.|.+++.|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em0_A 7 GMGEKTWKCRECDMCFSQASSLRLHQNV--HVGEKPSGPSSG 46 (46)
T ss_dssp SCCCCCCCCSSSCCCCSSHHHHHHHGGG--GSSSSCSCSSCC
T ss_pred cCCCcCeECCCCCcccCCHHHHHHHHHH--cCCCCCcCCCCC
Confidence 3589999999999999999999999999 999988 99887
No 113
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=9.4e-10 Score=65.89 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2em7_A 7 GTGEKPYKCEECGKGFICRRDLYTHHMV--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHHHHHGGG--GTTCCCSSTTCC
T ss_pred CCCCcCccCCCccchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3688999999999999999999999999 999998 99887
No 114
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.90 E-value=1.1e-09 Score=65.51 Aligned_cols=39 Identities=28% Similarity=0.482 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eop_A 7 GTGEKPHECRECGKSFSFNSQLIVHQRI--HTGENPSGPSSG 46 (46)
T ss_dssp CCCCCSCBCTTTCCBCSSHHHHHHHHTT--TTTSCCSCCCCC
T ss_pred cCCCCCeeCCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 99887
No 115
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.90 E-value=9.4e-10 Score=65.88 Aligned_cols=39 Identities=31% Similarity=0.490 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2eq0_A 7 GTGEKPYKCHECGKVFRRNSHLARHQLI--HTGEKPSGPSSG 46 (46)
T ss_dssp TTCCCCEECTTTCCEESSHHHHHHHHTT--TCCCCCSCCSCC
T ss_pred CCCCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99887
No 116
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.90 E-value=9.8e-10 Score=65.80 Aligned_cols=39 Identities=26% Similarity=0.423 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eml_A 7 GTGEKPYECSVCGKAFSHRQSLSVHQRI--HSGKKPSGPSSG 46 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHGG--GSSCCCSCSSCC
T ss_pred cCCCCCeeCCCcCCccCCHHHHHHHHHH--hcCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 99887
No 117
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.90 E-value=1.1e-09 Score=65.61 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ep2_A 7 GTGEKPYECSICGKSFTKKSQLHVHQQI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHHT--TSSCCSCCSCCC
T ss_pred CCCCcCcCCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99887
No 118
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=9.5e-10 Score=65.83 Aligned_cols=39 Identities=33% Similarity=0.583 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emm_A 7 GTGERPHKCNECGKSFIQSAHLIQHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHHH--HSCCCTTSSSCC
T ss_pred cCCCCCeeCCCCChhhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99887
No 119
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=1.3e-09 Score=65.31 Aligned_cols=39 Identities=28% Similarity=0.479 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ytj_A 7 GTGEKPYICAECGKAFTIRSNLIKHQKI--HTKQKPSGPSSG 46 (46)
T ss_dssp TSSCCSEECSSSCCEESSHHHHHHHHHH--TSCCCCSSCSCC
T ss_pred CCCCcCeECCCCChhhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99886
No 120
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=2.8e-10 Score=73.99 Aligned_cols=50 Identities=26% Similarity=0.439 Sum_probs=34.4
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc-cchhhcCCHHHHHhhc
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA-VCQKLSKSFESLREHL 63 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~-~C~~~f~~~~~l~~H~ 63 (267)
-+++||.|+.|++.|. .+.|..|+++ ++++| .|+ .||+.|..++.|..|+
T Consensus 6 C~~~~~~C~~C~k~f~-~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~ 57 (66)
T 2eod_A 6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHL 57 (66)
T ss_dssp CCCCEEECSSSCCEEE-HHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHH
T ss_pred CCCCCeeccccCCccC-HHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHH
Confidence 4688999999999999 9999999876 34444 555 5555554444444444
No 121
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=98.89 E-value=1.1e-09 Score=65.57 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=36.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
.+++++|.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2el6_A 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRM--HTREKPSGPSSG 46 (46)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHHGG--GCCSSCCSCCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 999998 99887
No 122
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=1.1e-09 Score=65.50 Aligned_cols=39 Identities=26% Similarity=0.335 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2epw_A 7 GTGEKPCKCTECGKAFCWKSQLIMHQRT--HVDDKHSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSSHHHHHHHHH--CCSCCCSCCCCC
T ss_pred CCCCCCeeCCCCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3688999999999999999999999999 999998 99887
No 123
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=9.5e-10 Score=65.86 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||.|+.|++.|.+++.|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emy_A 7 GTGENPYECHECGKAFSRKYQLISHQRT--HAGEKPSGPSSG 46 (46)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHH--HTTSCCSCSSCC
T ss_pred CCCCcCcCCCCCCcccCcHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 99887
No 124
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=1.1e-09 Score=65.52 Aligned_cols=39 Identities=26% Similarity=0.439 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytr_A 7 GTGEKPYKCNECGKAFSQTSKLARHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CSSCCTTCCTTTCCCCSSHHHHHHHHTT--TTTCSCCCSCCC
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 99887
No 125
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=98.89 E-value=9.4e-10 Score=65.91 Aligned_cols=39 Identities=31% Similarity=0.490 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ely_A 7 GTGEKPFKCVECGKGFSRRSALNVHHKL--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSBCCSSSCCCBSSTTHHHHHHHH--HSCCSSCSCCCC
T ss_pred CCCCCCcccCccCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99887
No 126
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.89 E-value=1e-09 Score=65.76 Aligned_cols=39 Identities=26% Similarity=0.346 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ysp_A 7 GTGEKPYKCEKCGKGYNSKFNLDMHQKV--HTGERPSGPSSG 46 (46)
T ss_dssp CSSCCSEEETTTTEEESCHHHHHHHHTT--SCSCCSSCCSCC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHh--hCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99887
No 127
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=1.2e-09 Score=65.51 Aligned_cols=39 Identities=33% Similarity=0.563 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em5_A 7 GSSTKSHQCHECGRGFTLKSHLNQHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSCSEECSSSCCEESSHHHHHHHHTT--TSCSCCSSCCCC
T ss_pred CCCCCCeECCcCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3688999999999999999999999999 999988 99887
No 128
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=98.88 E-value=1.1e-09 Score=65.64 Aligned_cols=39 Identities=33% Similarity=0.520 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ema_A 7 GTGEKRYKCNECGKVFSRNSQLSQHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp CTTSCCEECSSSCCEESSHHHHHHHHTG--GGCCCCCSSSCC
T ss_pred CCCCcCcCCCCCcchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 99887
No 129
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.88 E-value=1.2e-09 Score=65.32 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=35.9
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |+++++ .|++|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eov_A 7 GTGEKPYKCSDCGKSFTWKSRLRIHQKC--HTGERHSGPSSG 46 (46)
T ss_dssp CSSCCSCBCSSSCCBCSSHHHHHHHHHH--HSCCSSCCSCCC
T ss_pred CCCCCCccCCccChhhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3688999999999999999999999999 999988 99887
No 130
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.88 E-value=1.1e-09 Score=65.54 Aligned_cols=39 Identities=33% Similarity=0.508 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||.|+.|++.|.++..|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytd_A 7 GSGEKPYKCSECGKAFHRHTHLNEHRRI--HTGYRPSGPSSG 46 (46)
T ss_dssp SCCCCSEECSSSCCEESSHHHHHHHHHH--HTCCCSSCSSCC
T ss_pred cCCCcCeECCCCCCeeCChHHHHHHHHH--cCCCCCCCCCCC
Confidence 3688999999999999999999999999 999998 99887
No 131
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.88 E-value=1.2e-09 Score=65.34 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+.+.|..|+++ |++++| .|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2en8_A 7 GSGEKSHTCDECGKNFCYISALRIHQRV--HMGEKCSGPSSG 46 (46)
T ss_dssp CCCCSSEECTTTCCEESSHHHHHHHHTT--TCCSCSSCCSCC
T ss_pred CCCCCCeECCCcCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3689999999999999999999999999 999998 99887
No 132
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.88 E-value=9.1e-10 Score=66.00 Aligned_cols=39 Identities=21% Similarity=0.407 Sum_probs=36.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
.++++||.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytm_A 7 GTGEKPYKCMECGKAFGDNSSCTQHQRL--HTGQRPSGPSSG 46 (46)
T ss_dssp CSSCCSSSBTTTTBCCSSHHHHHHHHHH--HHSCCCCCCCCC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 999988 99887
No 133
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.88 E-value=1e-09 Score=65.67 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=36.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2en6_A 7 GSGEKPYGCNECGKTFSQKSILSAHQRT--HTGEKPSGPSSG 46 (46)
T ss_dssp CCSSCCEEETTTTEEESSHHHHHHHHHH--HSSCCCSSSCCC
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 999998 99887
No 134
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.87 E-value=1.1e-09 Score=65.59 Aligned_cols=39 Identities=28% Similarity=0.485 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~c 46 (46)
T 2ytk_A 7 GSGEKPYKCNECGKVFTQNSHLTNHWRI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSSSCSEECSSSCCEESSHHHHHHHHHH--HSSSSCSSCCCC
T ss_pred CCCCCCEeCCcCCCccCCHHHHHHHHHH--HCCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 99887
No 135
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.87 E-value=1.4e-09 Score=65.04 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=35.9
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||.|+.|++.|.+...|..|+++ |+++++ .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eme_A 7 GSGEKPYVCDYCGKAFGLSAELVRHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp TCCCCSEECSSSCCEESSHHHHHHHHGG--GCCCSCCSSCCC
T ss_pred CCCCCCeECCCCChhhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3688999999999999999999999999 999988 99887
No 136
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=98.87 E-value=1.3e-09 Score=65.21 Aligned_cols=39 Identities=23% Similarity=0.437 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+...|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em9_A 7 GTGEKPYNCKECGKSFRWASCLLKHQRV--HSGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHGGG--GTSCCCCSTTCC
T ss_pred CCCCcCeECCccccccCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 3688999999999999999999999999 999988 99887
No 137
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.87 E-value=1.6e-09 Score=65.10 Aligned_cols=39 Identities=23% Similarity=0.445 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHh-HhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|++ + |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~--H~~~k~~~C~~C 47 (47)
T 2epx_A 7 GTGKKPYECIECGKAFIQNTSLIRHWRYY--HTGEKPSGPSSG 47 (47)
T ss_dssp CCCCCSBCCSSSCCCBSSHHHHHHHHTTT--TTTSCSSSCCCC
T ss_pred cCCCCCEECCccCchhCChHHHHHHhHhh--cCCCCCCCCCCC
Confidence 368999999999999999999999999 8 999998 99887
No 138
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.87 E-value=8.8e-10 Score=66.05 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=35.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-++++||.|+.|++.|.+.+.|..|+++ |+++++ .|+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eoo_A 7 GSGERPYGCNECGKNFGRHSHLIEHLKR--HFREKSSGPSSG 46 (46)
T ss_dssp CSCCCCEECSSSCCEESSHHHHHHHHHH--HHSTTSSCCSCC
T ss_pred CCCCCCEEccccCcccCCHHHHHHHHHH--HcCCCCCCCCCC
Confidence 3689999999999999999999999999 999888 99887
No 139
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.87 E-value=1.3e-09 Score=65.22 Aligned_cols=39 Identities=23% Similarity=0.463 Sum_probs=35.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2en1_A 7 GSGEKPFKCEECGKRFTQNSQLHSHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEEETTTTEEESSHHHHHHHGGG--GSCCCCSCCCCC
T ss_pred CCCCCCeeCCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3688999999999999999999999999 999988 99887
No 140
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.87 E-value=1.3e-09 Score=65.32 Aligned_cols=39 Identities=23% Similarity=0.312 Sum_probs=36.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+.+.|..|+++ |++++| .|+.|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2yso_A 7 GSREKSHQCRECGEIFFQYVSLIEHQVL--HMGQKNSGPSSG 46 (46)
T ss_dssp SSCCCCEECTTTCCEESSHHHHHHHHHH--HSCCSCCCTTCC
T ss_pred cCCCCCEEccccChhhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3688999999999999999999999999 999998 99887
No 141
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1.5e-09 Score=64.97 Aligned_cols=39 Identities=26% Similarity=0.411 Sum_probs=36.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
.+++++|.|+.|++.|.+...|..|+++ |++++| .|++|
T Consensus 7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ep0_A 7 GTGEKPYKCDVCHKSFRYGSSLTVHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp STTCCSEECSSSCCEESSHHHHHHHHTT--TSSSCCCSCCCC
T ss_pred CCCCCCeeCcccCcccCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 4689999999999999999999999999 999998 99887
No 142
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=9.9e-10 Score=65.78 Aligned_cols=39 Identities=28% Similarity=0.475 Sum_probs=35.7
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2emh_A 7 GTGERPYICTVCGKAFTDRSNLIKHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp CSCCCSEECTTTCCEESSHHHHHHHHHH--HHCSSCSSSCCC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3688999999999999999999999999 999888 99887
No 143
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1.1e-09 Score=65.61 Aligned_cols=39 Identities=23% Similarity=0.305 Sum_probs=35.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|..++.|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emp_A 7 GTGVKPYMCNECGKAFSVYSSLTTHQVI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHHHHHHHH--HHCCSCCSCCCC
T ss_pred cCCCcCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3688999999999999999999999999 999988 99887
No 144
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.86 E-value=1.1e-09 Score=65.66 Aligned_cols=39 Identities=26% Similarity=0.345 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.++..|..|+++ |+++++ .|++|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em8_A 7 GSGEKPYKCVECGKGYKRRLDLDFHQRV--HTGEKLSGPSSG 46 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHHHHHHHH--HHCCCCCCSCCC
T ss_pred CCCCCCeECcccCchhCCHHHHHHHHHH--HcCCCCCCCCCC
Confidence 4689999999999999999999999999 999988 99887
No 145
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=98.85 E-value=4.8e-10 Score=74.25 Aligned_cols=61 Identities=20% Similarity=0.498 Sum_probs=41.8
Q ss_pred HHHHHHhHhcCCCCCC-Ccc--cchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHH
Q 024455 29 HLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA 100 (267)
Q Consensus 29 ~l~~H~~~~~H~~~~~-~C~--~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~ 100 (267)
.|..|...+ |+++++ .|+ .|++.|.....|..|+ .++|. |+.||+.|...+.|..|+++
T Consensus 5 ~~~~~~~~~-~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 5 PMNNLLNYV-VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ------------CRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp ---CTTSCC-CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEE------------CTTTCCEESCHHHHHHHHTT
T ss_pred Cccchhhcc-CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeE------------CCCCCchhCCHHHHHHHHHh
Confidence 344454443 777777 886 5888888888888887 33443 56677778888888888887
Q ss_pred hc
Q 024455 101 CS 102 (267)
Q Consensus 101 h~ 102 (267)
|+
T Consensus 72 Ht 73 (73)
T 1f2i_G 72 HT 73 (73)
T ss_dssp CC
T ss_pred cC
Confidence 74
No 146
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.85 E-value=9.1e-10 Score=65.94 Aligned_cols=39 Identities=26% Similarity=0.451 Sum_probs=35.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2yu8_A 7 GTGEKPYKCNECGKVFTQNSHLARHRRV--HTGGKPSGPSSG 46 (46)
T ss_dssp CCCCSSEECSSSCCEESSSHHHHHHTHH--HHSCCCSCSCCC
T ss_pred CCCCCCeECCcCCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 999888 99887
No 147
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.84 E-value=1e-09 Score=65.75 Aligned_cols=39 Identities=23% Similarity=0.485 Sum_probs=35.7
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++|
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytg_A 7 GTGEKPFKCGECGKSYNQRVHLTQHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CSSCCSEECTTTCCEESSSHHHHTTGGG--GSSCCSSCSCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3688999999999999999999999999 999988 99887
No 148
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=2.1e-09 Score=64.32 Aligned_cols=39 Identities=26% Similarity=0.481 Sum_probs=35.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~~ 46 (46)
T 2ep3_A 7 GTGEKPYRCAECGKAFTDRSNLFTHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCCSEECSSSCCEESSHHHHHHHHTT--TTTSCCCCTTCC
T ss_pred CCCCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3688999999999999999999999999 999988 99875
No 149
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.9e-09 Score=64.56 Aligned_cols=39 Identities=21% Similarity=0.337 Sum_probs=36.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
.+++++|.|+.|++.|.++..|..|+++ |++++| .|++|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytt_A 7 GEGEKPYQCSECGKSFSGSYRLTQHWIT--HTREKPSGPSSG 46 (46)
T ss_dssp CSCCCTTCCSSSCCCCSSHHHHHHHHTH--HHHCCCCSCCCC
T ss_pred CCCCCCeeCCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4689999999999999999999999999 999888 99887
No 150
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=98.81 E-value=2.2e-09 Score=67.29 Aligned_cols=49 Identities=27% Similarity=0.501 Sum_probs=25.3
Q ss_pred CcccchhhcCCHHHHHhhc-----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCCC
Q 024455 45 KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
.|+.|++.|.+.+.|..|+ .++|. |+.|++.|...+.|..|+++|++++
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~------------C~~C~~~f~~~~~l~~H~~~h~~~k 56 (57)
T 1bbo_A 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYH------------CTYCNFSFKTKGNLTKHMKSKAHSK 56 (57)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHTSSCCCEE------------CSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred cCCCCcCcCCCHHHHHHHHHhcCCCCCcc------------CCCCCchhcCHHHHHHHHHHhcccC
Confidence 4555555555555555555 12222 3445555555555555555555443
No 151
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.81 E-value=5.8e-09 Score=67.30 Aligned_cols=42 Identities=24% Similarity=0.407 Sum_probs=35.9
Q ss_pred CCCCCCCCCcccccc--CccccCChHHHHHHH-hHhcCCCCCC-Cccc
Q 024455 5 AELPKRSTARHKCVA--CYKQFKRKDHLIEHM-KISYHSVHQP-KCAV 48 (267)
Q Consensus 5 ~~~~~~~~k~~~C~~--C~k~f~~~~~l~~H~-~~~~H~~~~~-~C~~ 48 (267)
.+..-+|+|||+|.. |++.|.++++|..|+ ++ |++++| .|..
T Consensus 18 ~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rri--HTgEKP~~~~~ 63 (73)
T 1x3c_A 18 FPTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAV--HKSDLPAFSAE 63 (73)
T ss_dssp CSSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHH--SSSCCCCCCCS
T ss_pred ccccccCCCCeECCCCCcChhHcCHHHHHHHhhhh--CCCCCCccccc
Confidence 344468999999965 999999999999998 68 999999 7754
No 152
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.80 E-value=2.9e-09 Score=63.70 Aligned_cols=39 Identities=28% Similarity=0.529 Sum_probs=35.7
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~~ 46 (46)
T 2em2_A 7 GSGEKPFKCKECGKAFRQNIHLASHLRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHH--HCCCCSSCSSCC
T ss_pred CCCCCCEECCcCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 99875
No 153
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=5.7e-09 Score=61.47 Aligned_cols=38 Identities=13% Similarity=0.212 Sum_probs=34.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
.+++++|.|+.|++.|.++..|..|+++ |++++| .|++
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 43 (43)
T 2yrm_A 5 SSGNGAFFCNECDCRFSEEASLKRHTLQ--THSDKSGPSSG 43 (43)
T ss_dssp CSSSCCBCCSSSCCCBSSHHHHHHHHHH--HTCTTCSSSCC
T ss_pred cCCCCCEECCCCCCeeCChHHHHHHHHh--hCCCCCccCCC
Confidence 4689999999999999999999999999 999988 8864
No 154
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=7.1e-09 Score=61.95 Aligned_cols=38 Identities=32% Similarity=0.536 Sum_probs=34.6
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|+|+.|++.|.++..|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ytp_A 7 GTGERHYECSECGKAFARKSTLIMHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp SCCCCCEECSSSCCEESSHHHHHHHHTT--TSCCCCCSSCC
T ss_pred cCCCCCeECCcCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 8864
No 155
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.73 E-value=8e-09 Score=61.68 Aligned_cols=38 Identities=29% Similarity=0.504 Sum_probs=34.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|..++.|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2enf_A 7 GTGEKPYKCNECGKVFTQNSHLVRHRGI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSCBCSSSCCBCSSHHHHHHHHTT--TTTSSCCCCSC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHh--hCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 8864
No 156
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.73 E-value=1e-08 Score=59.85 Aligned_cols=36 Identities=22% Similarity=0.552 Sum_probs=33.1
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (267)
++++||.|+.|++.|.+++.|..|+++ |+++++ .|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 42 (42)
T 2yte_A 6 SGEKPYSCAECKETFSDNNRLVQHQKM--HTVKSGPSSG 42 (42)
T ss_dssp CSCCSCBCTTTCCBCSSHHHHHHHHHH--TSCCSSCCCC
T ss_pred CCCCCeECCCCCCccCCHHHHHHHHHH--hCCCCCCCCC
Confidence 588999999999999999999999999 999888 773
No 157
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.73 E-value=4e-10 Score=74.36 Aligned_cols=54 Identities=20% Similarity=0.303 Sum_probs=46.9
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcC
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHC 72 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C 72 (267)
+++++|.|+.|++.|.....|.. +++ .|+.||+.|.+.++|..|+ .++|.|+.|
T Consensus 14 ~~~~~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C 73 (73)
T 2ctu_A 14 LGDRSQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG 73 (73)
T ss_dssp CCCSEEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred CCCCCeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence 58899999999999999887754 455 9999999999999999998 457888776
No 158
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=98.73 E-value=7.8e-09 Score=60.41 Aligned_cols=36 Identities=31% Similarity=0.550 Sum_probs=33.2
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (267)
+++++|.|+.|++.|.+++.|..|+++ |+++++ .|+
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 42 (42)
T 2el5_A 6 SGENPYECSECGKAFNRKDQLISHQRT--HAGESGPSSG 42 (42)
T ss_dssp SSCCSEECSSSCCEESSHHHHHHHHGG--GCCCCSCCCC
T ss_pred CCCCCccCCCcChhhCCHHHHHHHHHh--cCCCCCCCCC
Confidence 588999999999999999999999999 999888 774
No 159
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.73 E-value=1.1e-08 Score=61.16 Aligned_cols=38 Identities=21% Similarity=0.402 Sum_probs=34.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |+++++ .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eoh_A 7 GSGKKPYECKECRKTFIQIGHLNQHKRV--HTGERSSGPSS 45 (46)
T ss_dssp CCCSCSCCCSSSCCCCSSHHHHHHHHHH--CSSCCSCSTTC
T ss_pred cCCCCCcCCCCcCchhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 8863
No 160
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=3.1e-09 Score=68.96 Aligned_cols=55 Identities=22% Similarity=0.329 Sum_probs=39.1
Q ss_pred CCCCCC-CcccchhhcCCHHHHHhhc----CCCCCCCcCCccccccccc-ccccccCChhhHHHHHHHhcCCCC
Q 024455 39 HSVHQP-KCAVCQKLSKSFESLREHL----TGPLSKAHCSGIFSDRGCN-LCMNIFDSPSSLIKHKEACSLSAP 106 (267)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~----~~~~~C~~C~k~f~~~~C~-~C~~~F~~~~~L~~H~~~h~~~~~ 106 (267)
+.+.+| .|..||+.|. .++|..|+ .++| .|+ .||+.|..++.|..|+++|...++
T Consensus 5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~------------~C~~~C~k~f~~~~~L~~H~~~hc~~~~ 65 (66)
T 2eod_A 5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPV------------ACPNQCGVGTVAREDLPGHLKDSCNTAL 65 (66)
T ss_dssp CCCCCEEECSSSCCEEE-HHHHHHHHHHCSSSEE------------ECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred cCCCCCeeccccCCccC-HHHHHHHHHHcCCcCc------------cCCcccCcccccHHHHHHHHHhhcccCc
Confidence 345666 8888888888 88888887 1223 266 677777778888888888866554
No 161
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=8.6e-09 Score=61.54 Aligned_cols=38 Identities=29% Similarity=0.470 Sum_probs=34.4
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yti_A 7 GTGEKPYKCNECGKVFTQNSHLARHRGI--HTGEKPSGPSS 45 (46)
T ss_dssp CSCCCTTCCSSSCCCCSSHHHHHHHHTT--TSCSCCSSTTC
T ss_pred CCCCcCeECCCCCcccCChhHHHHHhHh--cCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 8864
No 162
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=98.72 E-value=5.8e-10 Score=71.60 Aligned_cols=49 Identities=18% Similarity=0.348 Sum_probs=40.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhh
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (267)
.++++||.|+.|++.|.....|. ++ |++++| .|+.||+.|....++..+
T Consensus 9 H~~~k~~~C~~C~k~F~~~~~l~---~~--H~~~k~~~C~~C~k~f~~~~~~~~~ 58 (62)
T 1vd4_A 9 STNRASFKCPVCSSTFTDLEANQ---LF--DPMTGTFRCTFCHTEVEEDESAMPK 58 (62)
T ss_dssp CCSSSEEECSSSCCEEEHHHHHH---HE--ETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred cCCCCCccCCCCCchhccHHHhH---hh--cCCCCCEECCCCCCccccCcccccc
Confidence 36889999999999999888876 67 998888 999999999877665443
No 163
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=9.9e-09 Score=61.27 Aligned_cols=38 Identities=32% Similarity=0.479 Sum_probs=34.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~ 45 (46)
T 2emg_A 7 GTGENPFICSECGKVFTHKTNLIIHQKI--HTGERPSGPSS 45 (46)
T ss_dssp CCSCCSCBCTTTCCBCSSHHHHHHHHTT--TSCCCCSCSCC
T ss_pred CCCCCCEECCccCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3688999999999999999999999999 999988 8864
No 164
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=8.3e-09 Score=61.68 Aligned_cols=38 Identities=29% Similarity=0.532 Sum_probs=34.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eon_A 7 GTGEKPYKCQVCGKAFRVSSHLVQHHSV--HSGERPSGPSS 45 (46)
T ss_dssp CSSCCSCBCSSSCCBCSSHHHHHHHTTT--TTSCCSCTTSC
T ss_pred CCCCcccCCCCCCcccCcHHHHHHHHHh--cCCCCCCCCCC
Confidence 4689999999999999999999999999 999988 8864
No 165
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=98.71 E-value=7.8e-09 Score=61.78 Aligned_cols=38 Identities=24% Similarity=0.459 Sum_probs=34.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2emj_A 7 GTGEKPFECAECGKSFSISSQLATHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHHH--HTTSCSSSSCC
T ss_pred CCCCCCEECCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3689999999999999999999999999 999888 8864
No 166
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=9e-09 Score=59.82 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=33.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (267)
-+++++|.|+.|++.|.....|..|+++ |++++| .|
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C 41 (41)
T 2ept_A 5 SSGQRVYECQECGKSFRQKGSLTLHERI--HTGSGPSSG 41 (41)
T ss_dssp CCCCCCEECSSSCCEESSHHHHHHHGGG--CCCCSCSCC
T ss_pred cCCCCCeECCCCCCCcCCHHHHHHHHHH--hCCCCCcCC
Confidence 3689999999999999999999999999 999887 66
No 167
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=1e-08 Score=61.20 Aligned_cols=38 Identities=24% Similarity=0.520 Sum_probs=34.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yth_A 7 GSGEKPFQCEECGKRFTQNSHLHSHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSBCCSSSCCCBSSHHHHHHHGGG--GTTCCCSSCCC
T ss_pred CCCCcCCCCCCCCcccCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 3688999999999999999999999999 999888 8864
No 168
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=7.8e-09 Score=59.26 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=30.2
Q ss_pred CCCCCCcccccc--CccccCChHHHHHHHhHhcCCCC
Q 024455 8 PKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVH 42 (267)
Q Consensus 8 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~H~~~ 42 (267)
+.+++|||+|+. |++.|.+++.|..|+++ |+++
T Consensus 3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~--Htg~ 37 (38)
T 2eln_A 3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKV--HTAL 37 (38)
T ss_dssp CSSCCCCEECSSSSCCCEESCHHHHHHHHHH--HSCC
T ss_pred CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh--cCCC
Confidence 467999999986 99999999999999999 9875
No 169
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=9.1e-09 Score=61.40 Aligned_cols=38 Identities=26% Similarity=0.504 Sum_probs=34.6
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ytf_A 7 GTGEKPFECSECQKAFNTKSNLIVHQRT--HTGEKPSGPSS 45 (46)
T ss_dssp SCCCCSEECSSSCCEESSHHHHHHHHHT--SCSSSSSCCCC
T ss_pred CCCCCCcCCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 8864
No 170
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=9.4e-09 Score=61.33 Aligned_cols=38 Identities=29% Similarity=0.456 Sum_probs=34.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~p~~C~~ 45 (46)
T 2yts_A 7 GTGEKPYICNECGKSFIQKSHLNRHRRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHHHHHGGG--TSSCCSSCCCC
T ss_pred CCCCcCEECCCCChhhCChHHHHHHHHh--cCCCCCcCCCC
Confidence 3689999999999999999999999999 999988 8864
No 171
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=7.7e-09 Score=61.79 Aligned_cols=38 Identities=29% Similarity=0.483 Sum_probs=34.6
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|+|+.|++.|.+...|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2em4_A 7 GTGQRPYECIECGKAFKTKSSLICHRRS--HTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSEECSSSCCEESSHHHHHHHHHH--HSSSSCCCCCC
T ss_pred cCCCcCcCCCCCCCccCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 8864
No 172
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=1e-08 Score=61.20 Aligned_cols=38 Identities=26% Similarity=0.480 Sum_probs=34.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2em6_A 7 GMGEKCYKCDVCGKEFSQSSHLQTHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCBCSSSCCBCSSHHHHHHHHTT--TSSSCCCCTTC
T ss_pred cCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 3689999999999999999999999999 999988 8864
No 173
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=9.7e-09 Score=61.30 Aligned_cols=38 Identities=21% Similarity=0.436 Sum_probs=34.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eq2_A 7 GTGGKPYQCNECGKAFSQTSKLARHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp SSSSCSSSCCSSCCCCSSHHHHHHHGGG--GCCCCCCCCCC
T ss_pred cCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 3688999999999999999999999999 999888 8864
No 174
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=98.71 E-value=7.3e-09 Score=65.58 Aligned_cols=43 Identities=16% Similarity=0.444 Sum_probs=25.1
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcc---ccccCcchhhhhhhc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP---FEKTLSNAESQKKIS 123 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~---C~~~f~~~~~l~~H~ 123 (267)
|+.|++.|...+.|..|+++|++++||. |++.|.....|..|+
T Consensus 5 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~ 50 (60)
T 2adr_A 5 CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50 (60)
T ss_dssp CTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence 4455555555666666666666665554 555566666666664
No 175
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=8.4e-09 Score=61.31 Aligned_cols=38 Identities=24% Similarity=0.497 Sum_probs=34.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|+|+.|++.|.++..|..|+++ |+++++ .|++
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (45)
T 2epu_A 7 GTGQKPFECTHCGKSFRAKGNLVTHQRI--HTGEKSGPSSG 45 (45)
T ss_dssp CCSCCSEEETTTTEEESSHHHHHHHHTT--TSSCCCCCSCC
T ss_pred CCCCcCccCCCCCCccCChHHHHHHHHH--hCCCCCCCCCC
Confidence 4689999999999999999999999999 999988 8863
No 176
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=1.1e-08 Score=61.19 Aligned_cols=38 Identities=24% Similarity=0.458 Sum_probs=34.7
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|+.
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2enh_A 7 GTGEKPYECDVCRKAFSHHASLTQHQRV--HSGEKPSGPSS 45 (46)
T ss_dssp CCCSSSCBCTTTCCBCSSSHHHHHHGGG--SCCSCCCCCCC
T ss_pred cCCCCCcCCCCcCchhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 4689999999999999999999999999 999988 8863
No 177
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=1e-08 Score=61.28 Aligned_cols=38 Identities=26% Similarity=0.538 Sum_probs=34.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eom_A 7 GHGERGHRCSDCGKFFLQASNFIQHRRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCSSCCCSSSCCCCSSHHHHHHHHHH--HSSCCCSSCCC
T ss_pred CCCCCCcCCCCCCCeeCChHHHHHHHHH--hCCCCCCCCCC
Confidence 4689999999999999999999999999 999988 8864
No 178
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.70 E-value=1.1e-08 Score=61.63 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=36.2
Q ss_pred CCCCCccccc--cCccccCChHHHHHHHhHhcCCCCCC-Ccccc
Q 024455 9 KRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (267)
Q Consensus 9 ~~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C 49 (267)
-+++++|.|+ .|++.|..+..|..|+++ |++++| .|..|
T Consensus 7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 48 (48)
T 2ent_A 7 GTGEKPFACTWPGCGWRFSRSDELSRHRRS--HSGVKPSGPSSG 48 (48)
T ss_dssp SCCCCCEECCSSSCCCEESSHHHHHHHHTT--SCCCCSCSSCCC
T ss_pred cCCCCCeECCCCCCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3689999998 899999999999999999 999998 99887
No 179
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=98.70 E-value=1.2e-08 Score=59.55 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=33.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (267)
-++++||.|+.|++.|.+++.|..|+++ |++++| .|
T Consensus 6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~~k~~~C 42 (42)
T 2epc_A 6 SGGETPYLCGQCGKSFTQRGSLAVHQRS--CSQSGPSSG 42 (42)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHH--TTCCCCCCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHhhh--cCCCCCCCC
Confidence 3689999999999999999999999999 999887 76
No 180
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.70 E-value=1e-08 Score=61.21 Aligned_cols=38 Identities=26% Similarity=0.466 Sum_probs=34.6
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2en9_A 7 GAGKKLFKCNECKKTFTQSSSLTVHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCSSCCCBCTTTCCBCSSHHHHHHHHHH--HTSSCCCSCCC
T ss_pred CCCCCCEECCccCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 4689999999999999999999999999 999888 8864
No 181
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.70 E-value=1e-08 Score=61.18 Aligned_cols=38 Identities=26% Similarity=0.427 Sum_probs=34.4
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |+++++ .|+.
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2emi_A 7 GTGERHYECSECGKAFIQKSTLSMHQRI--HRGEKPSGPSS 45 (46)
T ss_dssp CSSCCCEECSSSCCEESSHHHHHHHHGG--GCSCCCCSCCC
T ss_pred cCCCCCCCCCCCCcccCCHHHHHHHHhH--hCCCCCCCCCC
Confidence 3688999999999999999999999999 999888 8864
No 182
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.70 E-value=1.2e-08 Score=60.92 Aligned_cols=38 Identities=26% Similarity=0.446 Sum_probs=34.4
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ep1_A 7 GTGEKPYECSDCGKSFIKKSQLHVHQRI--HTGENPSGPSS 45 (46)
T ss_dssp CSSCCSSCCSSSCCCCSSHHHHHHHHGG--GSSSCCCSSSC
T ss_pred CCCCCCcCCCCCCchhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3688999999999999999999999999 999988 8864
No 183
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=1.3e-08 Score=60.81 Aligned_cols=38 Identities=26% Similarity=0.440 Sum_probs=34.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eq1_A 7 GTGEKPYKCNECGKAFRAHSNLTTHQVI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCSCCCCCTTTTCCCSSHHHHHHHHTT--TCCSCCSSCCC
T ss_pred cCCCCCeECCcCChhhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3689999999999999999999999999 999888 8864
No 184
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=9.7e-09 Score=61.27 Aligned_cols=38 Identities=26% Similarity=0.399 Sum_probs=34.4
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.+++.|..|+++ |++++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eow_A 7 GTGEKPYKCNECGKAFRARSSLAIHQAT--HSGEKPSGPSS 45 (46)
T ss_dssp SCCCCCEECTTSCCEESSHHHHHHHHHH--HCCCSCSCTTC
T ss_pred CCCCCCeeccccCChhcCHHHHHHHHHH--cCCCCCCCCCC
Confidence 3689999999999999999999999999 999888 8864
No 185
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=1e-08 Score=60.50 Aligned_cols=37 Identities=32% Similarity=0.530 Sum_probs=33.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (267)
-++++||.|+.|++.|.++..|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2eoj_A 7 GTGENPYECCECGKVFSRKDQLVSHQKT--HSGQSGPSSG 44 (44)
T ss_dssp SSSCCSCEETTTTEECSSHHHHHHHHTT--SSSSCSCCCC
T ss_pred cCCCcCeeCCCCCCccCCHHHHHHHHHH--cCCCCCCCCC
Confidence 3688999999999999999999999999 999888 774
No 186
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=9.8e-09 Score=61.30 Aligned_cols=38 Identities=29% Similarity=0.517 Sum_probs=34.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |++++| .|++
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~ 45 (46)
T 2em3_A 7 GTGEKPYECKVCSKAFTQKAHLAQHQKT--HTGEKPSGPSS 45 (46)
T ss_dssp CSSCCSEECSSSCCEESSHHHHHHHHHH--HCCCCCCCSCC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3688999999999999999999999999 999888 8864
No 187
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=1.3e-08 Score=60.06 Aligned_cols=37 Identities=22% Similarity=0.424 Sum_probs=33.6
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (267)
-+++++|.|+.|++.|.+...|..|+++ |++++| .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2eof_A 7 GTGEKPYECNECQKAFNTKSNLMVHQRT--HTGESGPSSG 44 (44)
T ss_dssp CSCCCSEECTTTCCEESCHHHHHHHHHH--TTTSSCSCCC
T ss_pred CCCCCCeECCCCCcccCCHhHHHHHHHH--hCCCCCCCCC
Confidence 3689999999999999999999999999 999888 774
No 188
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.69 E-value=1.2e-08 Score=60.85 Aligned_cols=38 Identities=26% Similarity=0.488 Sum_probs=34.4
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|..+..|..|+++ |++++| .|++
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yrj_A 7 GTGEKPYRCGECGKAFAQKANLTQHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCEECSSSCCEESSHHHHHHHHTT--TSSCCSSCSCC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 3689999999999999999999999999 999888 8864
No 189
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=1.1e-08 Score=59.73 Aligned_cols=35 Identities=23% Similarity=0.460 Sum_probs=32.3
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cc
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (267)
++++||.|+.|++.|.+.+.|..|+++ |++++| .|
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2eos_A 7 GGEKPYPCEICGTRFRHLQTLKSHLRI--HTGSGPSSG 42 (42)
T ss_dssp SSSCCBCCSSSCCCBSSHHHHHHHTTT--TSCCSSTTC
T ss_pred CCCCCEECCCCCCccCCHHHHHHHHHh--cCCCCCCCC
Confidence 588999999999999999999999999 999887 66
No 190
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.68 E-value=1.3e-08 Score=60.03 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=33.4
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (267)
-+++++|.|+.|++.|.+...|..|+++ |++++| .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2en7_A 7 GTGMKPYVCNECGKAFRSKSYLIIHTRT--HTGESGPSSG 44 (44)
T ss_dssp SSSSSSSCCTTTCCCCSSHHHHHHHHTT--TCCSSSSCCC
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHhhh--cCCCCCCCCC
Confidence 3688999999999999999999999999 999888 774
No 191
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.67 E-value=1.2e-08 Score=60.88 Aligned_cols=38 Identities=26% Similarity=0.336 Sum_probs=34.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-++++||.|+.|++.|.++..|..|+++ |+++++ .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yto_A 7 GTGEKPYKCSDCGKAFTRKSGLHIHQQS--HTGERHSGPSS 45 (46)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHH--HTCCCBTTTBC
T ss_pred cCCCCCEECcccCCccCCHhHHHHHHHH--cCCCCCCCCCC
Confidence 3688999999999999999999999999 999888 8863
No 192
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=1.2e-08 Score=60.87 Aligned_cols=38 Identities=24% Similarity=0.384 Sum_probs=34.4
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCC-CCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSV-HQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~-~~~-~C~~ 48 (267)
-++++||.|+.|++.|.+...|..|+++ |++ ++| .|++
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~~C~~ 46 (46)
T 2eoy_A 7 GQKEKCFKCNKCEKTFSCSKYLTQHERI--HTRGVKSGPSSG 46 (46)
T ss_dssp CCCSCCEECSSSCCEESSSHHHHHHHTT--CCSCCTTSSSCC
T ss_pred cCCCCCEECcCCCCcCCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3689999999999999999999999999 998 888 8863
No 193
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.66 E-value=1.6e-08 Score=59.76 Aligned_cols=37 Identities=19% Similarity=0.467 Sum_probs=33.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (267)
-++++||.|+.|++.|.++..|..|+++ |+++++ .|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2yu5_A 7 GAGENPFKCSKCDRVFTQRNYLVQHERT--HARKSGPSSG 44 (44)
T ss_dssp CSCCCSEECSSSSCEESSSHHHHHHHHH--CCCCCSSCCC
T ss_pred cCCCCCeECCCCCchhCCHHHHHHHhHh--cCCCCCCCCC
Confidence 3689999999999999999999999999 999888 774
No 194
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.66 E-value=1.6e-08 Score=59.77 Aligned_cols=37 Identities=27% Similarity=0.566 Sum_probs=33.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (267)
-+++++|.|+.|++.|.....|..|+++ |++++| .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2emb_A 7 GHTRKRYECSKCQATFNLRKHLIQHQKT--HAAKSGPSSG 44 (44)
T ss_dssp CCCCSSEECTTTCCEESCHHHHHHHGGG--GCCCCCTTCC
T ss_pred cCCCCCeECCCCCCccCCHHHHHHHHHH--cCCCCCcCCC
Confidence 3688999999999999999999999999 999888 774
No 195
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.66 E-value=1.3e-08 Score=60.76 Aligned_cols=38 Identities=21% Similarity=0.369 Sum_probs=34.2
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.++..|..|+++ |+++++ .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~ 45 (46)
T 2eoz_A 7 GTGEKPYSCNVCGKAFVLSAHLNQHLRV--HTQETLSGPSS 45 (46)
T ss_dssp CSSCCSEEETTTTEEESSHHHHHHHHHH--HSSCCSSSCCC
T ss_pred CCCCCCeECcccChhhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3688999999999999999999999999 999888 8863
No 196
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.66 E-value=1e-08 Score=61.14 Aligned_cols=38 Identities=26% Similarity=0.449 Sum_probs=34.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|.+...|..|+++ |++++| .|++
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~kp~~C~~ 45 (46)
T 2eor_A 7 GTGEKPYNCEECGKAFIHDSQLQEHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp SSCCCSEECTTTCCEESSHHHHHHHHHH--HHSCCCSSSTT
T ss_pred cCCCcCccCCCCCCCcCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 3688999999999999999999999999 999888 8864
No 197
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.66 E-value=1.5e-08 Score=59.85 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=33.6
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (267)
.+++++|.|+.|++.|.+...|..|+++ |++++| .|+
T Consensus 7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (44)
T 2eou_A 7 GAAKTTSECQECGKIFRHSSLLIEHQAL--HAGESGPSSG 44 (44)
T ss_dssp CSSSCCCCCTTTCCCCSSHHHHHHHHHH--HTTSCCCCCC
T ss_pred CCCCcCeECCCCCcccCCHHHHHHHHHH--HCCCCCCCCC
Confidence 3588999999999999999999999999 999888 774
No 198
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=1.8e-08 Score=60.09 Aligned_cols=38 Identities=24% Similarity=0.405 Sum_probs=34.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~ 48 (267)
-+++++|.|+.|++.|...+.|..|+++ |++++| .|+.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eq3_A 7 GTGEKPYECNQCGKAFSVRSSLTTHQAI--HTGKKPSGPSS 45 (46)
T ss_dssp SCCCCSSEETTTTEECSSHHHHHHHHTT--SCCCCCCCSCC
T ss_pred CCCCCCeECCCCChhhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3688999999999999999999999999 999888 8863
No 199
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=1.2e-08 Score=59.54 Aligned_cols=36 Identities=28% Similarity=0.541 Sum_probs=32.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (267)
-++++||.|+.|++.|.+.+.|..|+++ |++++| .|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2ytb_A 6 SGGEKPYRCDQCGKAFSQKGSLIVHIRV--HTGSGPSSG 42 (42)
T ss_dssp CCSCCSBCCTTTTCCBSSHHHHHTTGGG--TSCCSCCCC
T ss_pred cCCCCCeeCCCccchhCCHHHHHHHHHH--hCCCCCCCC
Confidence 3588999999999999999999999999 998887 66
No 200
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.65 E-value=9.6e-09 Score=60.00 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=32.6
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (267)
-++++||.|+.|++.|.+...|..|+++ |++++| .|
T Consensus 6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2en2_A 6 SGGEKPYKCETCGARFVQVAHLRAHVLI--HTGSGPSSG 42 (42)
T ss_dssp CCSSCSEECTTTCCEESSHHHHHHHTHH--HHSCCSSCC
T ss_pred cCCCCCEeCCCcChhhCCHHHHHHHHHH--cCCCCCCCC
Confidence 3689999999999999999999999999 998887 66
No 201
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.64 E-value=2.1e-08 Score=55.83 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=30.4
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (267)
+++++|.|+.|++.|.+++.|..|+++ |++++|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~kp 35 (35)
T 2elx_A 3 SGSSGYVCALCLKKFVSSIRLRSHIRE--VHGAAQ 35 (35)
T ss_dssp CCCCSEECSSSCCEESSHHHHHHHHHH--TSCTTC
T ss_pred CCCCCeECCCCcchhCCHHHHHHHHHH--HcCCCC
Confidence 578999999999999999999999999 988764
No 202
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=98.62 E-value=2.5e-08 Score=57.23 Aligned_cols=33 Identities=21% Similarity=0.467 Sum_probs=31.0
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (267)
+++++|.|+.|++.|...+.|..|+++ |++++|
T Consensus 2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~ 34 (39)
T 1njq_A 2 WPPRSYTCSFCKREFRSAQALGGHMNV--HRRDRA 34 (39)
T ss_dssp CCSSSEECTTTCCEESSHHHHHHHHHT--TCCSCT
T ss_pred CCCCceECCCCCcccCCHHHHHHHHHH--cCCCcc
Confidence 478999999999999999999999999 999877
No 203
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=98.61 E-value=2.5e-08 Score=55.60 Aligned_cols=33 Identities=21% Similarity=0.449 Sum_probs=30.5
Q ss_pred CCCCccccccCccccCChHHHHHHHhHhcCCCCCC
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (267)
+++++|.|+.|++.|...+.|..|+++ |++++|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~ 35 (35)
T 1srk_A 3 SGKRPFVCRICLSAFTTKANCARHLKV--HTDTLS 35 (35)
T ss_dssp SCCSCEECSSSCCEESSHHHHHHHHGG--GTSCCC
T ss_pred CCCcCeeCCCCCcccCCHHHHHHHHHH--cCCCCC
Confidence 589999999999999999999999999 988764
No 204
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.61 E-value=1.4e-08 Score=60.69 Aligned_cols=37 Identities=30% Similarity=0.555 Sum_probs=33.3
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (267)
-+++++|+|+.|++.|.+...|..|+++ |+++++ .|+
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2emz_A 7 GSGERPFKCNECGKGFGRRSHLAGHLRL--HSREKSSGPS 44 (46)
T ss_dssp SSCCCSCCCSSSCCCCSSHHHHHHHHHH--HHHTTCCCSC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHH--hCCCCCCCCC
Confidence 3688999999999999999999999999 988888 886
No 205
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=2.4e-08 Score=56.48 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=31.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (267)
.+++++|.|+.|++.|.++..|..|+++ |++++|
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--h~~~kp 37 (37)
T 2elo_A 4 GSSGRSYSCPVCEKSFSEDRLIKSHIKT--NHPEVS 37 (37)
T ss_dssp CCCCCCCEETTTTEECSSHHHHHHHHHH--HCSSCC
T ss_pred CCCCCCcCCCCCCCccCCHHHHHHHHHH--HcCCCC
Confidence 3689999999999999999999999999 988764
No 206
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=3.4e-08 Score=58.34 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=32.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (267)
-+++++|.|+.|++.|.+.+.|..|+++ |++++| .|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~~ 43 (44)
T 2epv_A 7 GSGEKPYECNECGKAFIWKSLLIVHERT--HAGVSGPSS 43 (44)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHGG--GSSCSCCCC
T ss_pred cCCCcCeECCCCCcccCchHHHHHHHhH--hcCCCCCCC
Confidence 3689999999999999999999999999 998877 55
No 207
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.59 E-value=2.7e-08 Score=61.70 Aligned_cols=40 Identities=25% Similarity=0.252 Sum_probs=23.7
Q ss_pred CCCCCC-CcccchhhcCCHHHHHhhc------CCCCCCCcCCccccc
Q 024455 39 HSVHQP-KCAVCQKLSKSFESLREHL------TGPLSKAHCSGIFSD 78 (267)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~------~~~~~C~~C~k~f~~ 78 (267)
|+++++ .|++|++.|.+...|.+|+ .++|.|+.|++.|.+
T Consensus 7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence 555556 6666666666666666664 345555555555543
No 208
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=1.6e-08 Score=60.27 Aligned_cols=37 Identities=19% Similarity=0.389 Sum_probs=33.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~ 47 (267)
-++++||.|+.|++.|.....|..|+++ |++++| .|+
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~ 44 (46)
T 2en3_A 7 GTGEKPFQCKECGMNFSWSCSLFKHLRS--HERTDPSGPS 44 (46)
T ss_dssp SCCCCSEECSSSCCEESSSHHHHHHHHH--HHHSCCSSCS
T ss_pred cCCCCCeeCcccChhhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 3588999999999999999999999999 988887 775
No 209
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.55 E-value=1.9e-08 Score=59.34 Aligned_cols=36 Identities=31% Similarity=0.469 Sum_probs=32.6
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Cc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C 46 (267)
-++++||.|+.|++.|.+...|..|+++ |++++| .|
T Consensus 7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C 43 (44)
T 2eox_A 7 GTDSKSYNCNECGKAFTRIFHLTRHQKI--HTRKSGPSS 43 (44)
T ss_dssp CCCCCCEEETTTTEEESSSHHHHTTHHH--HCCCCCCSC
T ss_pred CCCCCCeECcccCcccCCHHHHHHHHHH--hCCCCCCCC
Confidence 3688999999999999999999999999 998887 76
No 210
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.55 E-value=2e-08 Score=59.85 Aligned_cols=30 Identities=27% Similarity=0.475 Sum_probs=20.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytn_A 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44 (46)
T ss_dssp CTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred CCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence 455666666667777777777777777665
No 211
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.55 E-value=2.1e-08 Score=59.75 Aligned_cols=31 Identities=26% Similarity=0.418 Sum_probs=22.1
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eq4_A 15 CKECGKSFSRAPCLLKHERLHSGEKPSGPSS 45 (46)
T ss_dssp BTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred CCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence 4556667777777777777777777777653
No 212
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.55 E-value=2.1e-08 Score=59.81 Aligned_cols=30 Identities=20% Similarity=0.293 Sum_probs=19.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2epz_A 15 CIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44 (46)
T ss_dssp CTTTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred CCCCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence 445566666667777777777777777665
No 213
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.55 E-value=9.2e-08 Score=66.31 Aligned_cols=63 Identities=13% Similarity=-0.001 Sum_probs=51.6
Q ss_pred CCCCCcCCcccccccccccccccCChhhHHHHHHH-hcCCCC--------cc---ccccCcchhhhhhhcccccc
Q 024455 66 PLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA-CSLSAP--------VP---FEKTLSNAESQKKISGAIDE 128 (267)
Q Consensus 66 ~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~-h~~~~~--------~~---C~~~f~~~~~l~~H~~~~~~ 128 (267)
.+.|.-.+..+....|+.|++.|.....|..|+++ |.++++ |. |++.|.....|..|++.+.+
T Consensus 13 ~~~c~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~ 87 (95)
T 2ej4_A 13 ELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (95)
T ss_dssp CCCCCCCCSSCSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred CceeEeecCCcCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC
Confidence 45665554445555699999999999999999998 888877 65 88999999999999977654
No 214
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=98.55 E-value=2.3e-08 Score=59.65 Aligned_cols=30 Identities=27% Similarity=0.325 Sum_probs=18.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em0_A 15 CRECDMCFSQASSLRLHQNVHVGEKPSGPS 44 (46)
T ss_dssp CSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence 444555666666666666666666666664
No 215
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.54 E-value=2.3e-08 Score=59.67 Aligned_cols=30 Identities=13% Similarity=0.125 Sum_probs=19.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|.+.+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2elz_A 15 CEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44 (46)
T ss_dssp CSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred CcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence 445566666666777777777777777665
No 216
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.54 E-value=1.7e-08 Score=59.65 Aligned_cols=31 Identities=26% Similarity=0.463 Sum_probs=22.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.||+.|.+.+.|..|+++|++++||.|+.
T Consensus 13 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 43 (44)
T 2emx_A 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43 (44)
T ss_dssp CSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5566777777777777777777777777653
No 217
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.54 E-value=1.9e-08 Score=60.02 Aligned_cols=30 Identities=23% Similarity=0.366 Sum_probs=18.5
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emf_A 15 CTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred CCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 445555666666666666666666666654
No 218
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=98.54 E-value=2.2e-08 Score=59.72 Aligned_cols=31 Identities=23% Similarity=0.444 Sum_probs=23.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emk_A 15 CKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5567777777888888888888888887764
No 219
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=6.1e-08 Score=54.39 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=30.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCC
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
.++++||+|+.|++.|..++.|..|+++ |++++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 36 (36)
T 2elv_A 4 GSSGLLYDCHICERKFKNELDRDRHMLV--HGDKW 36 (36)
T ss_dssp SCCCCCEECSSSCCEESSHHHHHHHHTT--TSTTC
T ss_pred CCCCCCeECCCCCCccCCHHHHHHHHHH--hcCCC
Confidence 4689999999999999999999999999 98753
No 220
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.53 E-value=2e-08 Score=59.90 Aligned_cols=31 Identities=26% Similarity=0.409 Sum_probs=21.5
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emm_A 15 CNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred CCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5556666777777777777777777777653
No 221
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.53 E-value=2.4e-08 Score=59.50 Aligned_cols=30 Identities=27% Similarity=0.452 Sum_probs=18.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ytr_A 15 CNECGKAFSQTSKLARHQRIHTGEKPSGPS 44 (46)
T ss_dssp CTTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred CCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence 444555666666666666666666666654
No 222
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.53 E-value=2.6e-08 Score=59.43 Aligned_cols=30 Identities=33% Similarity=0.403 Sum_probs=20.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|++|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytq_A 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44 (46)
T ss_dssp CSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred CCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence 455666666777777777777777777765
No 223
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.53 E-value=2.4e-08 Score=59.47 Aligned_cols=30 Identities=27% Similarity=0.365 Sum_probs=20.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eop_A 15 CRECGKSFSFNSQLIVHQRIHTGENPSGPS 44 (46)
T ss_dssp CTTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 445666666667777777777777777665
No 224
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=5.4e-08 Score=56.63 Aligned_cols=30 Identities=17% Similarity=0.443 Sum_probs=26.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 13 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2yte_A 13 CAECKETFSDNNRLVQHQKMHTVKSGPSSG 42 (42)
T ss_dssp CTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred CCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 667888889999999999999999999886
No 225
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=2.1e-08 Score=59.84 Aligned_cols=30 Identities=27% Similarity=0.403 Sum_probs=20.2
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eml_A 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred CCCcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence 455666666667777777777777777665
No 226
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=2.5e-08 Score=59.48 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=23.2
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoq_A 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred CCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5566777777788888888888888887753
No 227
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=98.52 E-value=2.3e-08 Score=59.56 Aligned_cols=30 Identities=27% Similarity=0.447 Sum_probs=18.5
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.||+.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2el4_A 15 CSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44 (46)
T ss_dssp CSSSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred CCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 445555666666666666666666666654
No 228
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=98.52 E-value=2.1e-08 Score=59.76 Aligned_cols=30 Identities=27% Similarity=0.465 Sum_probs=20.4
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ema_A 15 CNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred CCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence 455666666677777777777777777665
No 229
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=2.5e-08 Score=59.47 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=19.4
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2em7_A 15 CEECGKGFICRRDLYTHHMVHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred CCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 445566666666666666666666666664
No 230
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=2e-08 Score=59.86 Aligned_cols=30 Identities=27% Similarity=0.438 Sum_probs=19.1
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ene_A 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred CCCCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence 445556666666666666666666666654
No 231
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=2.1e-08 Score=59.76 Aligned_cols=30 Identities=30% Similarity=0.530 Sum_probs=21.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.||+.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emh_A 15 CTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44 (46)
T ss_dssp CTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred CCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence 555666677777777777777777777765
No 232
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=2.5e-08 Score=59.46 Aligned_cols=31 Identities=19% Similarity=0.189 Sum_probs=22.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.||+.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eov_A 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 45 (46)
T ss_dssp CSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred CCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 5566777777778888888888888877753
No 233
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=2.9e-08 Score=59.21 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=23.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytm_A 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45 (46)
T ss_dssp BTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5566777777778888888888888887753
No 234
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=98.52 E-value=2.5e-08 Score=59.45 Aligned_cols=30 Identities=30% Similarity=0.425 Sum_probs=17.4
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em9_A 15 CKECGKSFRWASCLLKHQRVHSGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred CCccccccCChHHHHHHHHHhCCCCCCCCC
Confidence 444555555556666666666666666554
No 235
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=2.6e-08 Score=59.38 Aligned_cols=31 Identities=29% Similarity=0.456 Sum_probs=22.2
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytj_A 15 CAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred CCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5556667777777777777777777777653
No 236
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=8.5e-08 Score=53.78 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=30.1
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCC
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
.++++||+|+.|++.|.....|..|+++ |++++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 36 (36)
T 2elq_A 4 GSSGKPFKCSLCEYATRSKSNLKAHMNR--HSTEK 36 (36)
T ss_dssp SCCCCSEECSSSSCEESCHHHHHHHHHH--SSTTC
T ss_pred CCCCCCccCCCCCchhCCHHHHHHHHHH--hccCC
Confidence 4689999999999999999999999999 98753
No 237
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=98.51 E-value=2e-08 Score=59.94 Aligned_cols=31 Identities=23% Similarity=0.256 Sum_probs=24.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ely_A 15 CVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred cCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5567777778888888888888888888763
No 238
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.51 E-value=2.9e-08 Score=59.19 Aligned_cols=30 Identities=23% Similarity=0.352 Sum_probs=17.4
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.||+.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2en1_A 15 CEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44 (46)
T ss_dssp ETTTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 444555555556666666666666666554
No 239
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.51 E-value=2.2e-08 Score=59.67 Aligned_cols=30 Identities=23% Similarity=0.403 Sum_probs=19.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq0_A 15 CHECGKVFRRNSHLARHQLIHTGEKPSGPS 44 (46)
T ss_dssp CTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 455666666666777777777777777665
No 240
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.51 E-value=2.2e-08 Score=59.74 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=21.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.||+.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoo_A 15 CNECGKNFGRHSHLIEHLKRHFREKSSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred ccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence 5556666777777777777777777777653
No 241
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.51 E-value=2.4e-08 Score=59.54 Aligned_cols=31 Identities=29% Similarity=0.364 Sum_probs=21.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|++|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emp_A 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5556666777777777777777777777653
No 242
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.51 E-value=2.3e-08 Score=59.64 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=22.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.||+.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emy_A 15 CHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred CCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence 5566777777777888888888888877753
No 243
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.50 E-value=2.7e-08 Score=59.33 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=21.1
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ep2_A 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 555666667777777777777777777765
No 244
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.50 E-value=2.4e-08 Score=59.54 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=21.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ytk_A 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred CCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence 555666777777777777777777777765
No 245
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.50 E-value=2.4e-08 Score=59.51 Aligned_cols=31 Identities=26% Similarity=0.428 Sum_probs=23.1
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eoe_A 15 CNECGKVFTQNSHLANHQRIHTGVKPSGPSS 45 (46)
T ss_dssp ETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred CCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5667777777778888888888888877753
No 246
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.50 E-value=2.5e-08 Score=59.49 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=19.1
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|++||+.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em5_A 15 CHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred CCcCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 445556666666666666666666666654
No 247
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=98.50 E-value=1.9e-08 Score=62.33 Aligned_cols=27 Identities=22% Similarity=0.552 Sum_probs=21.4
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPV 107 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~ 107 (267)
|+.||+.|...+.|..|+++|++++||
T Consensus 27 C~~C~k~f~~~~~L~~H~~~H~~~kp~ 53 (54)
T 1yui_A 27 CPICYAVIRQSRNLRRHLELRHFAKPG 53 (54)
T ss_dssp CTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred CCCCCcccCCHHHHHHHHHHhccCCCC
Confidence 556777777888888888888888876
No 248
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.49 E-value=2.9e-08 Score=59.12 Aligned_cols=30 Identities=20% Similarity=0.471 Sum_probs=19.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.||+.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eme_A 15 CDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred CCCCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 445566666666677777777777776664
No 249
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.49 E-value=2.2e-08 Score=59.67 Aligned_cols=30 Identities=27% Similarity=0.501 Sum_probs=20.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2yu8_A 15 CNECGKVFTQNSHLARHRRVHTGGKPSGPS 44 (46)
T ss_dssp CSSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred CCcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence 555666666777777777777777777765
No 250
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.49 E-value=2.5e-08 Score=59.47 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=19.5
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ysp_A 15 CEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44 (46)
T ss_dssp ETTTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred CCCCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence 455666666666666666666666666664
No 251
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=9.7e-08 Score=53.45 Aligned_cols=33 Identities=33% Similarity=0.512 Sum_probs=30.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCC
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
.+++++|.|+.|++.|.++..|..|+++ |++++
T Consensus 4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~ek 36 (36)
T 2elr_A 4 GSSGKTHLCDMCGKKFKSKGTLKSHKLL--HTADG 36 (36)
T ss_dssp CCCCSSCBCTTTCCBCSSHHHHHHHHHH--HSSCC
T ss_pred CCCCCCeecCcCCCCcCchHHHHHHHHH--hcCCC
Confidence 4689999999999999999999999999 88763
No 252
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.49 E-value=2.3e-08 Score=59.61 Aligned_cols=30 Identities=17% Similarity=0.350 Sum_probs=17.5
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|++|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytg_A 15 CGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44 (46)
T ss_dssp CTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 444555555566666666666666666554
No 253
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=9.4e-08 Score=53.52 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=30.0
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCC
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
.++++||.|+.|++.|.....|..|+++ |++++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 36 (36)
T 2elt_A 4 GSSGKPYKCPQCSYASAIKANLNVHLRK--HTGEK 36 (36)
T ss_dssp SCCCCSEECSSSSCEESSHHHHHHHHHH--HTCCC
T ss_pred CCCCCCCCCCCCCcccCCHHHHHHHHHH--ccCCC
Confidence 4689999999999999999999999999 88753
No 254
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=98.49 E-value=7e-08 Score=53.19 Aligned_cols=30 Identities=33% Similarity=0.703 Sum_probs=28.2
Q ss_pred CccccccCccccCChHHHHHHHhHhcCCCCCC
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (267)
+||.|+.|++.|.+.+.|..|+++ |+++++
T Consensus 1 kp~~C~~C~k~F~~~~~L~~H~~~--H~~~~~ 30 (33)
T 1rim_A 1 YKFACPECPKRFMRSDHLSKHITL--HELLGE 30 (33)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHHHH--HTTTCC
T ss_pred CcccCCCCCchhCCHHHHHHHHHH--hCCCCC
Confidence 689999999999999999999999 998876
No 255
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.49 E-value=3e-08 Score=59.13 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=22.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytd_A 15 CSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred CCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence 5566777777778888888888888887753
No 256
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=3.1e-08 Score=59.06 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=21.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2enc_A 15 CEECGKGFYTNSQCYSHQRSHSGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred CCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence 5556666777777777777777777777653
No 257
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.48 E-value=3e-08 Score=59.08 Aligned_cols=30 Identities=20% Similarity=0.118 Sum_probs=19.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||+|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2en8_A 15 CDECGKNFCYISALRIHQRVHMGEKCSGPS 44 (46)
T ss_dssp CTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred CCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 455666666666677777777777776664
No 258
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.47 E-value=9.9e-08 Score=61.70 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=34.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCCCcccch
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQ 50 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~~C~~C~ 50 (267)
.+++|||+|..|++.|.++..|..|+++ |+++...+..+.
T Consensus 8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~--Htg~~~~~~~~~ 47 (66)
T 2epp_A 8 LREAGILPCGLCGKVFTDANRLRQHEAQ--HGVTSLQLGYID 47 (66)
T ss_dssp CCCCCCCCCTTTCCCCSCHHHHHHHHHH--HTTTSCCCCSCC
T ss_pred CCCccCcCCCCCCCccCCHHHHHhhhhh--hCCCcccccccc
Confidence 5789999999999999999999999999 998765555554
No 259
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.47 E-value=3e-08 Score=59.12 Aligned_cols=31 Identities=26% Similarity=0.384 Sum_probs=23.1
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en6_A 15 CNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45 (46)
T ss_dssp ETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred CCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence 5667777777777888888888888877753
No 260
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.47 E-value=2.6e-08 Score=59.34 Aligned_cols=31 Identities=23% Similarity=0.230 Sum_probs=23.2
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.||+.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2epw_A 15 CTECGKAFCWKSQLIMHQRTHVDDKHSGPSS 45 (46)
T ss_dssp CSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred CCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5566777777778888888888888887753
No 261
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.47 E-value=9.1e-08 Score=53.66 Aligned_cols=33 Identities=33% Similarity=0.520 Sum_probs=29.8
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCC
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
.+++++|.|+.|++.|.....|..|+++ |++++
T Consensus 4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 36 (36)
T 2els_A 4 GSSGKIFTCEYCNKVFKFKHSLQAHLRI--HTNEK 36 (36)
T ss_dssp TSCCCCEECTTTCCEESSHHHHHHHHHH--HCCCC
T ss_pred CCCCCCEECCCCCceeCCHHHHHHHHHH--hCCCC
Confidence 4688999999999999999999999999 88753
No 262
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.47 E-value=3.4e-08 Score=58.83 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=22.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.||+.|...+.|..|+++|++++||+|..
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yso_A 15 CRECGEIFFQYVSLIEHQVLHMGQKNSGPSS 45 (46)
T ss_dssp CTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred ccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5566677777777888888888888877753
No 263
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=98.47 E-value=7.4e-08 Score=56.07 Aligned_cols=30 Identities=20% Similarity=0.372 Sum_probs=26.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 13 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2el5_A 13 CSECGKAFNRKDQLISHQRTHAGESGPSSG 42 (42)
T ss_dssp CSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred CCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 667888888899999999999999998884
No 264
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.46 E-value=3.5e-08 Score=58.81 Aligned_cols=31 Identities=13% Similarity=0.065 Sum_probs=22.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em8_A 15 CVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred CcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence 5566677777777778877787777777753
No 265
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=98.45 E-value=4.2e-08 Score=58.48 Aligned_cols=30 Identities=20% Similarity=0.399 Sum_probs=21.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|.+.+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2el6_A 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44 (46)
T ss_dssp CSSSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 555666677777777777777777777765
No 266
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.45 E-value=1e-07 Score=56.69 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=27.1
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoh_A 15 CKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred CCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5678888889999999999999999999864
No 267
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.45 E-value=4.3e-08 Score=58.37 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=21.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ep3_A 15 CAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5556667777777777777777777777753
No 268
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=98.44 E-value=1.4e-07 Score=53.20 Aligned_cols=32 Identities=31% Similarity=0.556 Sum_probs=28.7
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCC
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (267)
-++++||+|+.|++.|.++..|..|+++ |+++
T Consensus 6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 37 (37)
T 1p7a_A 6 STGIKPFQCPDCDRSFSRSDHLALHRKR--HMLV 37 (37)
T ss_dssp TCCSSSBCCTTTCCCBSSHHHHHHHHGG--GTCC
T ss_pred CCCCCCccCCCCCcccCcHHHHHHHHHH--hccC
Confidence 3689999999999999999999999999 8763
No 269
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=1.2e-07 Score=55.61 Aligned_cols=30 Identities=27% Similarity=0.383 Sum_probs=27.2
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 13 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 42 (43)
T 2yrm_A 13 CNECDCRFSEEASLKRHTLQTHSDKSGPSS 42 (43)
T ss_dssp CSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred CCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence 677888899999999999999999999985
No 270
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=98.43 E-value=6.9e-09 Score=66.48 Aligned_cols=48 Identities=17% Similarity=0.295 Sum_probs=35.7
Q ss_pred HHHHHhHhcCCCCCC-CcccchhhcCCHHHHH-hhc-CCCCCCCcCCcccccc
Q 024455 30 LIEHMKISYHSVHQP-KCAVCQKLSKSFESLR-EHL-TGPLSKAHCSGIFSDR 79 (267)
Q Consensus 30 l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~-~H~-~~~~~C~~C~k~f~~~ 79 (267)
|..|+++ |++++| .|+.||+.|.+...|. .|. .++|.|+.|++.|...
T Consensus 2 L~~h~~~--H~~~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~ 52 (62)
T 1vd4_A 2 IETDERD--STNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEED 52 (62)
T ss_dssp CCCCSSS--CCSSSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEEC
T ss_pred hhhHHHH--cCCCCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccC
Confidence 3457788 999888 9999999999888885 222 5678777777776643
No 271
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=98.43 E-value=9.3e-08 Score=62.77 Aligned_cols=40 Identities=15% Similarity=0.294 Sum_probs=24.3
Q ss_pred cccccCChhhHHHHHHHhcCCCCcc-----ccccCcchhhhhhhc
Q 024455 84 CMNIFDSPSSLIKHKEACSLSAPVP-----FEKTLSNAESQKKIS 123 (267)
Q Consensus 84 C~~~F~~~~~L~~H~~~h~~~~~~~-----C~~~f~~~~~l~~H~ 123 (267)
|++.|...+.|..|+++|++++||. |++.|.....|..|+
T Consensus 25 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~ 69 (72)
T 2epa_A 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR 69 (72)
T ss_dssp TCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred CccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence 5666666666666666666666553 455566666666665
No 272
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.43 E-value=7.2e-08 Score=56.78 Aligned_cols=30 Identities=20% Similarity=0.316 Sum_probs=26.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eox_A 15 CNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44 (44)
T ss_dssp ETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred CcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 677888888999999999999999999885
No 273
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=1.3e-07 Score=55.68 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=26.5
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (44)
T 2eou_A 15 CQECGKIFRHSSLLIEHQALHAGESGPSSG 44 (44)
T ss_dssp CTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred CCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence 667888888999999999999999999884
No 274
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=1.4e-07 Score=56.22 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=27.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eom_A 15 CSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred CCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence 677888899999999999999999999986
No 275
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.42 E-value=1.4e-07 Score=56.15 Aligned_cols=31 Identities=19% Similarity=0.461 Sum_probs=27.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em3_A 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 6678888889999999999999999998864
No 276
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=1.3e-07 Score=53.56 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=28.5
Q ss_pred CCCCccccccCccccCChHHHHHH-HhHhcCCCC
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEH-MKISYHSVH 42 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H-~~~~~H~~~ 42 (267)
++++||+|+.|++.|.+++.|..| +++ |+++
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~--H~~~ 36 (37)
T 2elm_A 5 SSGHLYYCSQCHYSSITKNCLKRHVIQK--HSNI 36 (37)
T ss_dssp SSSCEEECSSSSCEEECHHHHHHHHHHH--TCCC
T ss_pred CCCcCeECCCCCcccCCHHHHHHHHHHH--ccCc
Confidence 589999999999999999999999 888 8864
No 277
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.41 E-value=1.3e-07 Score=55.60 Aligned_cols=30 Identities=23% Similarity=0.445 Sum_probs=25.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eof_A 15 CNECQKAFNTKSNLMVHQRTHTGESGPSSG 44 (44)
T ss_dssp CTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred CCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence 667888888899999999999999998874
No 278
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=98.41 E-value=1.5e-07 Score=53.06 Aligned_cols=29 Identities=24% Similarity=0.374 Sum_probs=25.4
Q ss_pred CCCCCCccccccCccccCChHHHHHHHhH
Q 024455 8 PKRSTARHKCVACYKQFKRKDHLIEHMKI 36 (267)
Q Consensus 8 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (267)
+..|||||+|+.|+|+|.++++|..|+..
T Consensus 2 ~~~gekp~~C~~CgK~F~~~s~L~~H~py 30 (36)
T 1fv5_A 2 SLLKPARFMCLPCGIAFSSPSTLEAHQAY 30 (36)
T ss_dssp CSSSCCCCEETTTTEECSCHHHHHHHHHH
T ss_pred CCCCccCeECCCCCCccCCHhHccCcCCe
Confidence 34689999999999999999999999854
No 279
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=98.40 E-value=1.5e-07 Score=56.00 Aligned_cols=31 Identities=23% Similarity=0.339 Sum_probs=26.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emj_A 15 CAECGKSFSISSQLATHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 6677888888999999999999999998863
No 280
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.2e-07 Score=56.36 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=26.1
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enf_A 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred CCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence 5677888888899999999999999988864
No 281
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.7e-07 Score=55.76 Aligned_cols=31 Identities=29% Similarity=0.439 Sum_probs=27.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en9_A 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred CCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 6678888889999999999999999999863
No 282
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=8.2e-08 Score=57.34 Aligned_cols=31 Identities=26% Similarity=0.309 Sum_probs=22.7
Q ss_pred ccccccccCChhhHHHHHH-HhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKE-ACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~-~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|++ +|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~ 46 (47)
T 2epx_A 15 CIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46 (47)
T ss_dssp CSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred CCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence 5556677777777888877 788888887753
No 283
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=98.40 E-value=1.7e-07 Score=49.78 Aligned_cols=30 Identities=17% Similarity=0.432 Sum_probs=27.4
Q ss_pred CCccccccCccccCChHHHHHHHhHhcCCCCC
Q 024455 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
++||.|+.|++.|.....|..|+++ |++++
T Consensus 1 ~k~~~C~~C~~~f~~~~~l~~H~~~--h~~~k 30 (30)
T 2m0d_A 1 MKPYQCDYCGRSFSDPTSKMRHLET--HDTDK 30 (30)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHT--TCCCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHH--hccCC
Confidence 5799999999999999999999999 88753
No 284
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.40 E-value=1.5e-07 Score=56.03 Aligned_cols=31 Identities=29% Similarity=0.423 Sum_probs=26.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em4_A 15 CIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred CCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 6678888888999999999999999998863
No 285
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.6e-07 Score=55.92 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=27.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yto_A 15 CSDCGKAFTRKSGLHIHQQSHTGERHSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred CcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence 6678888889999999999999999999864
No 286
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.2e-07 Score=56.37 Aligned_cols=31 Identities=26% Similarity=0.490 Sum_probs=26.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|++|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enh_A 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45 (46)
T ss_dssp CTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred CCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 6678888889999999999999999998864
No 287
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.3e-07 Score=56.22 Aligned_cols=31 Identities=26% Similarity=0.461 Sum_probs=26.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yti_A 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred CCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence 5667888888899999999999999988863
No 288
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.2e-07 Score=56.39 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=26.1
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytp_A 15 CSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred CCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 6677888888899999999999999988863
No 289
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.3e-07 Score=56.20 Aligned_cols=31 Identities=26% Similarity=0.487 Sum_probs=26.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytf_A 15 CSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 6678888888999999999999999998864
No 290
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.1e-07 Score=56.38 Aligned_cols=30 Identities=20% Similarity=0.419 Sum_probs=27.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (45)
T 2epu_A 15 CTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44 (45)
T ss_dssp ETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred CCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence 778888999999999999999999999885
No 291
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.6e-07 Score=55.77 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=26.5
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep1_A 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred CCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5677888888999999999999999998863
No 292
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=1.6e-07 Score=55.74 Aligned_cols=31 Identities=32% Similarity=0.418 Sum_probs=26.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eow_A 15 CNECGKAFRARSSLAIHQATHSGEKPSGPSS 45 (46)
T ss_dssp CTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred ccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence 6678888888999999999999999998863
No 293
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=1.4e-07 Score=56.15 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=26.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yth_A 15 CEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred CCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 5667788888889999999999999988864
No 294
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=1.3e-07 Score=56.17 Aligned_cols=30 Identities=23% Similarity=0.453 Sum_probs=26.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2emg_A 15 CSECGKVFTHKTNLIIHQKIHTGERPSGPS 44 (46)
T ss_dssp CTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred CCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 667888889999999999999999999986
No 295
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=1.4e-07 Score=56.06 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=25.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq2_A 15 CNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5667788888889999999999999988863
No 296
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=7.1e-08 Score=57.46 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=24.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em2_A 15 CKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred CCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5667777888888888888888888888764
No 297
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=1.3e-07 Score=55.61 Aligned_cols=30 Identities=30% Similarity=0.363 Sum_probs=25.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2en7_A 15 CNECGKAFRSKSYLIIHTRTHTGESGPSSG 44 (44)
T ss_dssp CTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred CCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence 566778888889999999999999998874
No 298
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=1.5e-07 Score=55.90 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=26.4
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emi_A 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred CCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence 6678888888999999999999999998863
No 299
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.39 E-value=1.6e-07 Score=55.27 Aligned_cols=30 Identities=17% Similarity=0.407 Sum_probs=26.2
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2yu5_A 15 CSKCDRVFTQRNYLVQHERTHARKSGPSSG 44 (44)
T ss_dssp CSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred CCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence 667888888899999999999999999884
No 300
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=98.39 E-value=1.6e-07 Score=54.51 Aligned_cols=29 Identities=34% Similarity=0.613 Sum_probs=25.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C 109 (267)
|+.||+.|...+.|..|+++|++++||.|
T Consensus 14 C~~C~k~f~~~~~l~~H~~~H~~~k~~~C 42 (42)
T 2epc_A 14 CGQCGKSFTQRGSLAVHQRSCSQSGPSSG 42 (42)
T ss_dssp CSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred CCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence 67788888889999999999999999876
No 301
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=1.5e-07 Score=56.03 Aligned_cols=31 Identities=23% Similarity=0.420 Sum_probs=26.2
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em6_A 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5667888888899999999999999998863
No 302
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=1.6e-07 Score=55.80 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=26.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~ 45 (46)
T 2eor_A 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred CCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence 6678888888999999999999999998863
No 303
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=98.38 E-value=1.6e-07 Score=56.63 Aligned_cols=33 Identities=21% Similarity=0.340 Sum_probs=28.6
Q ss_pred CCCCccccccCccccCChHHHHHHHh-HhcCCCCCC
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP 44 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~H~~~~~ 44 (267)
+++|||.|+.|++.|.....|..|++ + |+++..
T Consensus 3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~--H~~e~~ 36 (48)
T 3iuf_A 3 DRDKPYACDICGKRYKNRPGLSYHYAHS--HLAEEE 36 (48)
T ss_dssp TTTSCEECTTTCCEESSHHHHHHHHHHS--SCC---
T ss_pred CCCcCEECCCcCcccCCHHHHHHHhhhh--cCCCCC
Confidence 58999999999999999999999999 8 988754
No 304
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=1.1e-07 Score=53.62 Aligned_cols=32 Identities=25% Similarity=0.307 Sum_probs=29.1
Q ss_pred CCCCCccccccCccccCCh-HHHHHHHhHhcCCCC
Q 024455 9 KRSTARHKCVACYKQFKRK-DHLIEHMKISYHSVH 42 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~-~~l~~H~~~~~H~~~ 42 (267)
-++++||+|+.|++.|.++ +.|..|+++ |+++
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~--H~~~ 36 (37)
T 2elp_A 4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWA--HEGV 36 (37)
T ss_dssp CCCCCCEECSSSSCEECSSCHHHHHHHHH--HHTC
T ss_pred CCCCCCeECCCCChhhccCHHHHHHHHHh--cCCC
Confidence 3588999999999999999 999999999 8775
No 305
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.38 E-value=1.9e-07 Score=55.56 Aligned_cols=31 Identities=19% Similarity=0.286 Sum_probs=26.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eoz_A 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45 (46)
T ss_dssp ETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred CcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 6778888888999999999999999998863
No 306
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.38 E-value=2.6e-07 Score=59.61 Aligned_cols=29 Identities=21% Similarity=0.248 Sum_probs=25.8
Q ss_pred cccccccCChhhHHHHH-HHhcCCCCcccc
Q 024455 82 NLCMNIFDSPSSLIKHK-EACSLSAPVPFE 110 (267)
Q Consensus 82 ~~C~~~F~~~~~L~~H~-~~h~~~~~~~C~ 110 (267)
+.|++.|.+.++|..|+ ++|++++|+.|.
T Consensus 33 ~~CgKaFsr~s~L~~H~rriHTgEKP~~~~ 62 (73)
T 1x3c_A 33 QGCFAAFTIQQNLILHYQAVHKSDLPAFSA 62 (73)
T ss_dssp TTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred CCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence 45999999999999997 689999999875
No 307
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=1.2e-07 Score=54.86 Aligned_cols=29 Identities=28% Similarity=0.389 Sum_probs=25.4
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C 109 (267)
|+.|++.|...+.|..|+++|++++||.|
T Consensus 13 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C 41 (41)
T 2ept_A 13 CQECGKSFRQKGSLTLHERIHTGSGPSSG 41 (41)
T ss_dssp CSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred CCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence 67788888889999999999999999876
No 308
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=98.37 E-value=2.1e-07 Score=48.47 Aligned_cols=27 Identities=15% Similarity=0.445 Sum_probs=25.1
Q ss_pred CCccccccCccccCChHHHHHHHhHhcCC
Q 024455 12 TARHKCVACYKQFKRKDHLIEHMKISYHS 40 (267)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~ 40 (267)
++||.|+.|++.|.+.+.|..|+++ |+
T Consensus 1 ek~~~C~~C~k~f~~~~~l~~H~~~--H~ 27 (27)
T 2kvh_A 1 EKPFSCSLCPQRSRDFSAMTKHLRT--HG 27 (27)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHH--CC
T ss_pred CcCccCCCcChhhCCHHHHHHHHHH--cc
Confidence 5799999999999999999999998 74
No 309
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.37 E-value=1.4e-07 Score=56.14 Aligned_cols=31 Identities=26% Similarity=0.247 Sum_probs=26.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|++|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emz_A 15 CNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred CCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5667888888899999999999999998864
No 310
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=98.37 E-value=2e-07 Score=51.27 Aligned_cols=28 Identities=25% Similarity=0.309 Sum_probs=25.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~ 108 (267)
|+.||+.|...+.|..|+++|++++||.
T Consensus 5 C~~C~k~F~~~~~L~~H~~~H~~~~~~~ 32 (33)
T 1rim_A 5 CPECPKRFMRSDHLSKHITLHELLGEER 32 (33)
T ss_dssp CSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred CCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence 7789999999999999999999999874
No 311
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=98.37 E-value=1.6e-07 Score=49.03 Aligned_cols=27 Identities=26% Similarity=0.406 Sum_probs=25.0
Q ss_pred CCccccccCccccCChHHHHHHHhHhcCC
Q 024455 12 TARHKCVACYKQFKRKDHLIEHMKISYHS 40 (267)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~ 40 (267)
++||+|+.|++.|.+.+.|..|+++ |+
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--H~ 27 (27)
T 2kvg_A 1 AAPYRCPLCRAGCPSLASMQAHMRG--HS 27 (27)
T ss_dssp CCTEEETTTTEEESCHHHHHHHHTT--CC
T ss_pred CcCcCCCCCCcccCCHHHHHHHHHh--cC
Confidence 5799999999999999999999998 74
No 312
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.37 E-value=1.8e-07 Score=55.63 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=25.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq1_A 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45 (46)
T ss_dssp CTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred CCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5667788888889999999999999988863
No 313
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=1.6e-07 Score=55.84 Aligned_cols=31 Identities=26% Similarity=0.363 Sum_probs=25.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~ 45 (46)
T 2yts_A 15 CNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred CCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence 6677788888888999998999888888863
No 314
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=1.6e-07 Score=55.75 Aligned_cols=31 Identities=19% Similarity=0.372 Sum_probs=26.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yrj_A 15 CGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred CCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 6677888888899999999999999988863
No 315
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=1.5e-07 Score=55.30 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=24.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|++|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eoj_A 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44 (44)
T ss_dssp ETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred CCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence 667778888888888888888888888874
No 316
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.35 E-value=1.9e-07 Score=54.98 Aligned_cols=30 Identities=27% Similarity=0.260 Sum_probs=25.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|++|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g 44 (44)
T 2epv_A 15 CNECGKAFIWKSLLIVHERTHAGVSGPSSG 44 (44)
T ss_dssp CSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred CCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence 667888888899999999999999998764
No 317
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.35 E-value=3.3e-08 Score=68.06 Aligned_cols=41 Identities=15% Similarity=0.382 Sum_probs=36.5
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-Ccccchh
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQK 51 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~ 51 (267)
.++++||.|+.|++.|.+...|..|+++ |++++| .|..|.+
T Consensus 20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~--Ht~ekp~~C~~~~~ 61 (88)
T 1x6f_A 20 RLQNSTYQCKHCDSKLQSTAELTSHLNI--HNEEFQKRAKRQER 61 (88)
T ss_dssp CCCCSCEECSSSCCEESSHHHHHHHHHH--HHHHHHHHCCCCSC
T ss_pred cCCCCCCcCCCCCCEeCCHHHHHHHHHH--hCCCCCcccchhhh
Confidence 4689999999999999999999999999 998888 8887654
No 318
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=98.35 E-value=2.3e-07 Score=48.68 Aligned_cols=28 Identities=25% Similarity=0.526 Sum_probs=25.8
Q ss_pred CCccccccCccccCChHHHHHHHhHhcCCC
Q 024455 12 TARHKCVACYKQFKRKDHLIEHMKISYHSV 41 (267)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~ 41 (267)
++||.|+.|++.|...+.|..|+++ |++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--h~~ 28 (28)
T 2kvf_A 1 MRPYSCSVCGKRFSLKHQMETHYRV--HTG 28 (28)
T ss_dssp CCSEECSSSCCEESCHHHHHHHHTT--SCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHh--cCC
Confidence 5799999999999999999999998 864
No 319
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.35 E-value=1.7e-07 Score=55.11 Aligned_cols=30 Identities=20% Similarity=0.423 Sum_probs=24.9
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2emb_A 15 CSKCQATFNLRKHLIQHQKTHAAKSGPSSG 44 (44)
T ss_dssp CTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred CCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence 667778888888888998889888888874
No 320
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.35 E-value=2.4e-07 Score=55.69 Aligned_cols=30 Identities=30% Similarity=0.471 Sum_probs=18.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~ 110 (267)
|++|++.|...+.|..|+++|++++||.|.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (48)
T 2epr_A 15 CEICGKIFRDVYHLNRHKLSHSGEKPYSSG 44 (48)
T ss_dssp ETTTTEEESSHHHHHHHGGGSCSCCCCCSC
T ss_pred CCCCCcccCCHHHHHHHHHhcCCCCCccCC
Confidence 555666666666666666666666666644
No 321
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.34 E-value=1.9e-07 Score=55.49 Aligned_cols=31 Identities=19% Similarity=0.296 Sum_probs=22.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|++|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytt_A 15 CSECGKSFSGSYRLTQHWITHTREKPSGPSS 45 (46)
T ss_dssp CSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5566677777777777877777777777753
No 322
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=98.34 E-value=2.3e-07 Score=57.30 Aligned_cols=39 Identities=23% Similarity=0.403 Sum_probs=18.5
Q ss_pred ccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc
Q 024455 23 QFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 23 ~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (267)
.|.+...|..|+++ |+++++ .|+.||+.|.+.++|..|+
T Consensus 5 ~~~~~~~l~~h~~~--H~~~k~~~C~~C~k~f~~~~~L~~H~ 44 (54)
T 1yui_A 5 RAKHPPGTEKPRSR--SQSEQPATCPICYAVIRQSRNLRRHL 44 (54)
T ss_dssp CCSCSSCCCCCHHH--HTSSCCEECTTTCCEESSHHHHHHHH
T ss_pred ccCCCcchhhHHHh--cCCCCCccCCCCCcccCCHHHHHHHH
Confidence 34444444444444 444444 4444444444444444444
No 323
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.34 E-value=2.1e-07 Score=55.26 Aligned_cols=31 Identities=29% Similarity=0.419 Sum_probs=26.4
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq3_A 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45 (46)
T ss_dssp ETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred CCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 6778888888899999999999999988863
No 324
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.33 E-value=1.8e-07 Score=54.40 Aligned_cols=29 Identities=24% Similarity=0.254 Sum_probs=24.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C 109 (267)
|+.|++.|...+.|..|+++|++++||.|
T Consensus 14 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2en2_A 14 CETCGARFVQVAHLRAHVLIHTGSGPSSG 42 (42)
T ss_dssp CTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred CCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence 66778888888899999999999988876
No 325
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.32 E-value=1.8e-07 Score=55.54 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=26.5
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2en3_A 15 CKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45 (46)
T ss_dssp CSSSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred CcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 6678888888899999999999999998863
No 326
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.32 E-value=2.3e-07 Score=52.65 Aligned_cols=33 Identities=24% Similarity=0.489 Sum_probs=29.9
Q ss_pred CCCCccccc--cCccccCChHHHHHHHhHhcCCCCCC
Q 024455 10 RSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP 44 (267)
Q Consensus 10 ~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (267)
+++++|.|+ .|++.|.+.+.|..|+++ |+++++
T Consensus 2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k~ 36 (38)
T 1bhi_A 2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHK--HEMTLK 36 (38)
T ss_dssp TTCCCEECCCTTTCCEESSHHHHHHHHHH--HHTTTT
T ss_pred CCCcceECCCCCCCcccCCHHHHHHHHHH--hCCCCC
Confidence 578999999 699999999999999999 988764
No 327
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=98.32 E-value=3.4e-07 Score=48.29 Aligned_cols=28 Identities=29% Similarity=0.660 Sum_probs=26.0
Q ss_pred CccccccCccccCChHHHHHHHhHhcCCCC
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (267)
+||.|+.|++.|...+.|..|+++ |+++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~ 28 (29)
T 1ard_A 1 RSFVCEVCTRAFARQEHLKRHYRS--HTNE 28 (29)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH--HSCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHH--hcCC
Confidence 589999999999999999999999 8875
No 328
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.32 E-value=2.7e-07 Score=54.53 Aligned_cols=31 Identities=16% Similarity=0.166 Sum_probs=23.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|+++++|.|+.
T Consensus 13 C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~ 43 (45)
T 2epq_A 13 CPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS 43 (45)
T ss_dssp ETTTTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred CCCCCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence 6667777777888888888888888887654
No 329
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=98.32 E-value=2.4e-07 Score=48.96 Aligned_cols=29 Identities=34% Similarity=0.687 Sum_probs=26.5
Q ss_pred CccccccCccccCChHHHHHHHhHhcCCCCC
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
+||.|+.|++.|...+.|..|+++ |++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 29 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHLTLHILL--HENKK 29 (29)
T ss_dssp CCEECSSSSCEESCSHHHHHHHTG--GGSCC
T ss_pred CCccCCCCCchhCCHHHHHHHHHH--hcCCC
Confidence 689999999999999999999999 88753
No 330
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.31 E-value=1.5e-07 Score=55.98 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=22.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep0_A 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred CcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence 5566677777777777777777777777653
No 331
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=98.30 E-value=3.8e-07 Score=49.47 Aligned_cols=30 Identities=33% Similarity=0.533 Sum_probs=27.4
Q ss_pred CCccccc--cCccccCChHHHHHHHhHhcCCCCC
Q 024455 12 TARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 12 ~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
++||.|+ .|++.|.+.+.|..|+++ |++++
T Consensus 1 ek~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~~ 32 (32)
T 1zfd_A 1 DRPYSCDHPGCDKAFVRNHDLIRHKKS--HQEKA 32 (32)
T ss_dssp CCSBCCCCTTCCCCBSSSHHHHHHHGG--GTCCC
T ss_pred CCCCcCcCCCCCCccCCHHHHHHHHHH--ccCCC
Confidence 5799999 899999999999999999 98763
No 332
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=98.30 E-value=2.6e-07 Score=52.23 Aligned_cols=32 Identities=25% Similarity=0.564 Sum_probs=28.9
Q ss_pred CCCCccccc--cCccccCChHHHHHHHhHhcCCCCC
Q 024455 10 RSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 10 ~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
++++||.|+ .|++.|.+++.|..|+++ |++++
T Consensus 4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~ek 37 (37)
T 1va1_A 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRW--HTGER 37 (37)
T ss_dssp SSCCCEECCSTTCCCEESCHHHHHHHHHH--HHTTC
T ss_pred CCCCCCCCCCCCCCCccCCHHHHHHHHHh--cCCCC
Confidence 589999998 599999999999999999 88753
No 333
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.28 E-value=2.3e-07 Score=55.18 Aligned_cols=31 Identities=26% Similarity=0.465 Sum_probs=24.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
|++|++.|...+.|..|+++|++++||.|+.
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eon_A 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45 (46)
T ss_dssp CSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred CCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence 5567777778888888888888888888763
No 334
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.27 E-value=2.1e-08 Score=66.88 Aligned_cols=60 Identities=20% Similarity=0.259 Sum_probs=31.8
Q ss_pred HHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc----CCCCCCCcCCcccccccccccccccCChhhHHHHHHHhcCC
Q 024455 30 LIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLS 104 (267)
Q Consensus 30 l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~----~~~~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~ 104 (267)
|..|+++ |.+.++ .|..|++.|. ...|..|+ .+++. |+.|++.|. ...|..|+++|.++
T Consensus 5 L~~H~~~--~c~~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~~------------C~~C~~~~~-~~~l~~H~~~c~~~ 68 (75)
T 2d9k_A 5 SSGHEET--ECPLRLAVCQHCDLELS-ILKLKEHEDYCGARTEL------------CGNCGRNVL-VKDLKTHPEVCGRE 68 (75)
T ss_dssp CSCCCCC--CCCCCCEECSSSCCEEC-HHHHHHHHHHHHHCEEE------------CSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred HHhhCcc--cCCCcccCCcccChHhh-HHHHHHHHhHcCCCceE------------cccCCCcCc-HHHHHHHHHHccCC
Confidence 4445555 555555 5666655553 55555554 23333 334455444 35666666666554
Q ss_pred C
Q 024455 105 A 105 (267)
Q Consensus 105 ~ 105 (267)
+
T Consensus 69 ~ 69 (75)
T 2d9k_A 69 G 69 (75)
T ss_dssp S
T ss_pred c
Confidence 3
No 335
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.27 E-value=2.9e-07 Score=54.67 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=26.5
Q ss_pred ccccccccCChhhHHHHHHHhcC-CCCcccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSL-SAPVPFE 110 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~-~~~~~C~ 110 (267)
|+.|++.|...+.|..|+++|++ ++||.|+
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~ 45 (46)
T 2eoy_A 15 CNKCEKTFSCSKYLTQHERIHTRGVKSGPSS 45 (46)
T ss_dssp CSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred CcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence 66788888899999999999999 9999885
No 336
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=98.27 E-value=5.7e-07 Score=48.40 Aligned_cols=29 Identities=31% Similarity=0.584 Sum_probs=26.5
Q ss_pred Cccccc--cCccccCChHHHHHHHhHhcCCCCC
Q 024455 13 ARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 13 k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
+||.|+ .|++.|.+.+.|..|+++ |++++
T Consensus 1 kp~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k 31 (31)
T 1sp2_A 1 RPFMCTWSYCGKRFTRSDELQRHKRT--HTGEK 31 (31)
T ss_dssp CCCBCCSTTCCCBCSSHHHHHHHHTT--TSCCC
T ss_pred CCcCCcCCCCCcccCCHhHHHHHHHH--hcCCC
Confidence 589998 999999999999999999 98763
No 337
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.26 E-value=2.5e-07 Score=53.67 Aligned_cols=29 Identities=31% Similarity=0.470 Sum_probs=21.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C 109 (267)
|+.||+.|...+.|..|+++|++++||.|
T Consensus 14 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2ytb_A 14 CDQCGKAFSQKGSLIVHIRVHTGSGPSSG 42 (42)
T ss_dssp CTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred CCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence 55667777777788888888888888775
No 338
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=98.26 E-value=3.7e-08 Score=53.90 Aligned_cols=30 Identities=33% Similarity=0.523 Sum_probs=27.7
Q ss_pred CccccccCccccCChHHHHHHHhHhcCCCCCC
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (267)
+||.|+.|++.|.+.+.|..|+++ |++++|
T Consensus 1 kp~~C~~C~k~f~~~~~L~~H~~~--H~~~kp 30 (32)
T 2kfq_A 1 YAFACPACPKRFMRSDALSKHIKT--AFIVVA 30 (32)
T ss_dssp CCSSSSSSCTTHHHHHTTSSSTTS--SSSSSS
T ss_pred CCCCCCCCCcccCCHHHHHHHHHH--HccCCC
Confidence 589999999999999999999999 998765
No 339
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=98.25 E-value=5e-07 Score=47.91 Aligned_cols=29 Identities=17% Similarity=0.305 Sum_probs=26.4
Q ss_pred CccccccCccccCChHHHHHHHhHhcCCCCC
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
++|.|+.|++.|...+.|..|+++ |++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--h~~~~ 29 (30)
T 1klr_A 1 KTYQCQYCEFRSADSSNLKTHIKT--KHSKE 29 (30)
T ss_dssp CCCCCSSSSCCCSCSHHHHHHHHH--HTSSC
T ss_pred CCccCCCCCCccCCHHHHHHHHHH--HccCC
Confidence 589999999999999999999999 87664
No 340
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=98.24 E-value=3.8e-07 Score=48.00 Aligned_cols=29 Identities=38% Similarity=0.652 Sum_probs=26.4
Q ss_pred CccccccCccccCChHHHHHHHhHhcCCCCC
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
+||.|+.|++.|.....|..|+++ |++++
T Consensus 1 ~~~~C~~C~k~f~~~~~l~~H~~~--H~~~k 29 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNLKRHLRI--HSGEK 29 (29)
T ss_dssp CCEECTTTSCEESCHHHHHHHHHH--HHTCC
T ss_pred CCccCCCCCCccCChhHHHHHHHH--hcCCC
Confidence 589999999999999999999999 87753
No 341
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=97.55 E-value=1.4e-07 Score=50.32 Aligned_cols=29 Identities=28% Similarity=0.571 Sum_probs=26.7
Q ss_pred CCccccccCccccCChHHHHHHHhHhcCCCC
Q 024455 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (267)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (267)
++||.|+.|++.|...+.|..|+++ |+++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--h~~~ 29 (30)
T 2lvr_A 1 MKPYVCIHCQRQFADPGALQRHVRI--HTGE 29 (30)
Confidence 4799999999999999999999999 8765
No 342
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.23 E-value=2.9e-07 Score=53.52 Aligned_cols=29 Identities=24% Similarity=0.380 Sum_probs=23.4
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C 109 (267)
|+.|++.|...+.|..|+++|++++||+|
T Consensus 14 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2eos_A 14 CEICGTRFRHLQTLKSHLRIHTGSGPSSG 42 (42)
T ss_dssp CSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred CCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence 55677778888888888888888888876
No 343
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=98.22 E-value=5.4e-07 Score=51.41 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=27.0
Q ss_pred cccccccccCChhhHHHHHHHhcCCCCccc
Q 024455 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (267)
Q Consensus 80 ~C~~C~~~F~~~~~L~~H~~~h~~~~~~~C 109 (267)
.|+.||+.|...+.|..|+++|++++||.+
T Consensus 8 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~ 37 (39)
T 1njq_A 8 TCSFCKREFRSAQALGGHMNVHRRDRARLR 37 (39)
T ss_dssp ECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence 378899999999999999999999999864
No 344
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.53 E-value=1.6e-07 Score=49.73 Aligned_cols=28 Identities=32% Similarity=0.632 Sum_probs=25.9
Q ss_pred CccccccCccccCChHHHHHHHhHhcCCCC
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (267)
+||.|+.|++.|...+.|..|+++ |+++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 28 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLIAHVRQ--HTGE 28 (29)
Confidence 589999999999999999999999 8865
No 345
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=98.21 E-value=6.3e-07 Score=47.64 Aligned_cols=29 Identities=41% Similarity=0.671 Sum_probs=25.9
Q ss_pred CccccccCccccCChHHHHHH-HhHhcCCCCC
Q 024455 13 ARHKCVACYKQFKRKDHLIEH-MKISYHSVHQ 43 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H-~~~~~H~~~~ 43 (267)
+||.|+.|++.|.+.+.|..| +++ |++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~~--H~~~~ 30 (30)
T 1paa_A 1 KAYACGLCNRAFTRRDLLIRHAQKI--HSGNL 30 (30)
T ss_dssp CCSBCTTTCCBCSSSHHHHHHHTTT--SCCCC
T ss_pred CCcCCcccCcccCChHHHHHHHHHH--ccCCC
Confidence 589999999999999999999 688 88763
No 346
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=98.21 E-value=4.1e-07 Score=47.86 Aligned_cols=28 Identities=39% Similarity=0.750 Sum_probs=25.9
Q ss_pred CccccccCccccCChHHHHHHHhHhcCCCC
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (267)
+||.|+.|++.|...+.|..|+++ |+++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~ 28 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLKAHLKI--HIAD 28 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHHHHHHH--HHSC
T ss_pred CCCcCCCCCcccCCHHHHHHHHHH--hccC
Confidence 589999999999999999999999 8765
No 347
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=98.19 E-value=8.8e-07 Score=45.81 Aligned_cols=27 Identities=30% Similarity=0.550 Sum_probs=23.8
Q ss_pred ccccccCccccCChHHHHHHHhHhcCCCC
Q 024455 14 RHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (267)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (267)
||+|+.|++.|.+.+.|..|+++ |+++
T Consensus 1 ~~~C~~C~k~f~~~~~l~~H~~~--h~~~ 27 (27)
T 1znf_A 1 XYKCGLCERSFVEKSALSRHQRV--HKNX 27 (27)
T ss_dssp -CBCSSSCCBCSSHHHHHHHGGG--TCC-
T ss_pred CccCCCCCCcCCCHHHHHHHHHH--cCCC
Confidence 68999999999999999999999 8763
No 348
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.16 E-value=2e-07 Score=62.03 Aligned_cols=50 Identities=18% Similarity=0.234 Sum_probs=45.4
Q ss_pred CCCCCccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (267)
..+++++.|+.|++.|. ...|..|+ . |.+++| .|+.|++.|. ...|..|+
T Consensus 12 ~c~~r~~~C~~C~~~~~-~~~L~~H~-~--~c~~~~~~C~~C~~~~~-~~~l~~H~ 62 (75)
T 2d9k_A 12 ECPLRLAVCQHCDLELS-ILKLKEHE-D--YCGARTELCGNCGRNVL-VKDLKTHP 62 (75)
T ss_dssp CCCCCCEECSSSCCEEC-HHHHHHHH-H--HHHHCEEECSSSCCEEE-TTGGGTHH
T ss_pred cCCCcccCCcccChHhh-HHHHHHHH-h--HcCCCceEcccCCCcCc-HHHHHHHH
Confidence 36899999999999995 99999999 8 999999 9999999987 48899997
No 349
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.41 E-value=3.2e-07 Score=47.22 Aligned_cols=26 Identities=27% Similarity=0.567 Sum_probs=23.8
Q ss_pred CccccccCccccCChHHHHHHHhHhcCC
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHS 40 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~ 40 (267)
|||.|+.|++.|.+.+.|..|+++ |+
T Consensus 1 kp~~C~~C~k~f~~~~~l~~H~~~--H~ 26 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLANHIRH--HD 26 (26)
Confidence 589999999999999999999998 64
No 350
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=98.10 E-value=6.9e-07 Score=50.29 Aligned_cols=30 Identities=17% Similarity=0.105 Sum_probs=20.7
Q ss_pred CCCCCC-CcccchhhcCCHHHHHhhcCCCCCCC
Q 024455 39 HSVHQP-KCAVCQKLSKSFESLREHLTGPLSKA 70 (267)
Q Consensus 39 H~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~C~ 70 (267)
+.+++| +|++||+.|.++++|.+|+ ||.|.
T Consensus 3 ~~gekp~~C~~CgK~F~~~s~L~~H~--py~C~ 33 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSPSTLEAHQ--AYYCS 33 (36)
T ss_dssp SSSCCCCEETTTTEECSCHHHHHHHH--HHTST
T ss_pred CCCccCeECCCCCCccCCHhHccCcC--CeECc
Confidence 456667 7777777777777777776 55553
No 351
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.09 E-value=1.5e-06 Score=47.95 Aligned_cols=27 Identities=30% Similarity=0.424 Sum_probs=23.2
Q ss_pred cccccccccCChhhHHHHHHHhcCCCC
Q 024455 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (267)
Q Consensus 80 ~C~~C~~~F~~~~~L~~H~~~h~~~~~ 106 (267)
.|+.|++.|.+.+.|..|+++|++++|
T Consensus 9 ~C~~C~k~f~~~~~L~~H~~~h~~~kp 35 (35)
T 2elx_A 9 VCALCLKKFVSSIRLRSHIREVHGAAQ 35 (35)
T ss_dssp ECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred ECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence 377888899999999999999998875
No 352
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.08 E-value=8.6e-07 Score=52.97 Aligned_cols=29 Identities=21% Similarity=0.205 Sum_probs=22.4
Q ss_pred ccccccCChhhHHHHHHHhcCCCCccccc
Q 024455 83 LCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (267)
Q Consensus 83 ~C~~~F~~~~~L~~H~~~h~~~~~~~C~~ 111 (267)
.|++.|...+.|..|+++|++++||+|..
T Consensus 19 ~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 47 (48)
T 2ent_A 19 GCGWRFSRSDELSRHRRSHSGVKPSGPSS 47 (48)
T ss_dssp SCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred CCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 57777777888888888888888887753
No 353
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=2e-06 Score=48.23 Aligned_cols=26 Identities=15% Similarity=0.367 Sum_probs=22.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAP 106 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~ 106 (267)
|+.|++.|...+.|..|+++|++++|
T Consensus 12 C~~C~k~f~~~~~l~~H~~~h~~~kp 37 (37)
T 2elo_A 12 CPVCEKSFSEDRLIKSHIKTNHPEVS 37 (37)
T ss_dssp ETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred CCCCCCccCCHHHHHHHHHHHcCCCC
Confidence 77788889999999999999998875
No 354
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=98.05 E-value=8.6e-07 Score=52.99 Aligned_cols=32 Identities=25% Similarity=0.581 Sum_probs=28.8
Q ss_pred CCCCccccc--cCccccCChHHHHHHHhHhcCCCCC
Q 024455 10 RSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQ 43 (267)
Q Consensus 10 ~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~~~ 43 (267)
++++||.|+ .|++.|.+++.|..|+++ |++++
T Consensus 14 ~~~k~~~C~~~~C~k~F~~~~~L~~H~~~--H~~ek 47 (47)
T 1ncs_A 14 MPDKTFECLFPGCTKTFKRRYNIRSHIQT--HLEDR 47 (47)
T ss_dssp ETTTEEECCCTTCCCEECSSSSHHHHHHH--HTTTC
T ss_pred CCCCCeECCCCCCCCccCCHHHHHHHHHH--ccCCC
Confidence 589999995 799999999999999999 88763
No 355
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=98.03 E-value=1.3e-07 Score=51.62 Aligned_cols=27 Identities=22% Similarity=0.439 Sum_probs=24.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPV 107 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~ 107 (267)
|+.||+.|...++|..|+++|++++|+
T Consensus 5 C~~C~k~f~~~~~L~~H~~~H~~~kp~ 31 (32)
T 2kfq_A 5 CPACPKRFMRSDALSKHIKTAFIVVAL 31 (32)
T ss_dssp SSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred CCCCCcccCCHHHHHHHHHHHccCCCC
Confidence 777888899999999999999999886
No 356
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=98.02 E-value=3.1e-06 Score=44.35 Aligned_cols=25 Identities=20% Similarity=0.506 Sum_probs=22.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+.||+.|...+.|..|+++|++++
T Consensus 5 C~~C~~~f~~~~~l~~H~~~h~~~k 29 (29)
T 1ard_A 5 CEVCTRAFARQEHLKRHYRSHTNEK 29 (29)
T ss_dssp CTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred CCCCCcccCCHHHHHHHHHHhcCCC
Confidence 7889999999999999999998864
No 357
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=98.01 E-value=2.5e-06 Score=47.14 Aligned_cols=26 Identities=15% Similarity=0.531 Sum_probs=22.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAP 106 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~ 106 (267)
|+.|++.|...+.|..|+++|++++|
T Consensus 10 C~~C~k~f~~~~~l~~H~~~H~~~~~ 35 (35)
T 1srk_A 10 CRICLSAFTTKANCARHLKVHTDTLS 35 (35)
T ss_dssp CSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCCC
Confidence 77788888889999999999988765
No 358
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=98.01 E-value=3.2e-06 Score=44.57 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=23.8
Q ss_pred cccccccccCChhhHHHHHHHhcCCCC
Q 024455 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (267)
Q Consensus 80 ~C~~C~~~F~~~~~L~~H~~~h~~~~~ 106 (267)
.|+.||+.|...+.|..|+++|+++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~h~~~~~ 30 (30)
T 1klr_A 4 QCQYCEFRSADSSNLKTHIKTKHSKEK 30 (30)
T ss_dssp CCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred cCCCCCCccCCHHHHHHHHHHHccCCC
Confidence 378899999999999999999998764
No 359
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=97.99 E-value=2.5e-06 Score=44.77 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=23.1
Q ss_pred cccccccccCChhhHHHHHHHhcCCC
Q 024455 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 80 ~C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
.|+.||+.|...+.|..|+++|++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 1rik_A 4 ACPECPKRFMRSDHLTLHILLHENKK 29 (29)
T ss_dssp ECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred cCCCCCchhCCHHHHHHHHHHhcCCC
Confidence 37889999999999999999998864
No 360
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.96 E-value=3.5e-06 Score=44.10 Aligned_cols=26 Identities=23% Similarity=0.378 Sum_probs=23.2
Q ss_pred cccccccccCChhhHHHHHHHhcCCC
Q 024455 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 80 ~C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
.|+.|++.|...+.|..|+++|++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2m0f_A 4 KCRECGKQFTTSGNLKRHLRIHSGEK 29 (29)
T ss_dssp ECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred cCCCCCCccCChhHHHHHHHHhcCCC
Confidence 37889999999999999999998874
No 361
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=97.95 E-value=3.9e-06 Score=43.94 Aligned_cols=27 Identities=30% Similarity=0.508 Sum_probs=24.8
Q ss_pred Cccccc--cCccccCChHHHHHHHhHhcCCC
Q 024455 13 ARHKCV--ACYKQFKRKDHLIEHMKISYHSV 41 (267)
Q Consensus 13 k~~~C~--~C~k~f~~~~~l~~H~~~~~H~~ 41 (267)
++|.|+ .|++.|...+.|..|+++ |++
T Consensus 1 k~~~C~~~~C~k~f~~~~~l~~H~~~--H~~ 29 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDRRKLNRHKKI--HTG 29 (29)
T ss_dssp CCEEECSTTTCEEESSHHHHHHHHGG--GTC
T ss_pred CCCCCcCCcCcCccCCHHHHHHHHHH--hCC
Confidence 589999 999999999999999999 864
No 362
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.94 E-value=8.6e-07 Score=60.83 Aligned_cols=46 Identities=13% Similarity=0.147 Sum_probs=36.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCccccccCcchhhhhhhccccc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAID 127 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~C~~~f~~~~~l~~H~~~~~ 127 (267)
|+.|++.|...+.|..|+++|++++||.|.. +....+|..|.+.+.
T Consensus 28 C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~-~~~~~~~~~~~~~~~ 73 (88)
T 1x6f_A 28 CKHCDSKLQSTAELTSHLNIHNEEFQKRAKR-QERRKQLLSKQKYAD 73 (88)
T ss_dssp CSSSCCEESSHHHHHHHHHHHHHHHHHHCCC-CSCCCCCCCCCCCCC
T ss_pred CCCCCCEeCCHHHHHHHHHHhCCCCCcccch-hhhHHHHHhhhcccc
Confidence 7778889999999999999999999999965 455666666664443
No 363
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=97.94 E-value=3.1e-06 Score=43.61 Aligned_cols=24 Identities=29% Similarity=0.559 Sum_probs=21.0
Q ss_pred ccccccccCChhhHHHHHHHhcCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLS 104 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~ 104 (267)
|+.||+.|...+.|..|+++|+++
T Consensus 4 C~~C~k~f~~~~~l~~H~~~h~~~ 27 (27)
T 1znf_A 4 CGLCERSFVEKSALSRHQRVHKNX 27 (27)
T ss_dssp CSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred CCCCCCcCCCHHHHHHHHHHcCCC
Confidence 788999999999999999999764
No 364
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.93 E-value=4.5e-06 Score=43.60 Aligned_cols=25 Identities=20% Similarity=0.365 Sum_probs=22.6
Q ss_pred ccccccccCChhhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+.|++.|...+.|..|+++|++++
T Consensus 5 C~~C~~~f~~~~~l~~H~~~h~~~~ 29 (29)
T 2m0e_A 5 CPHCDKKFNQVGNLKAHLKIHIADG 29 (29)
T ss_dssp CSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred CCCCCcccCCHHHHHHHHHHhccCC
Confidence 7788999999999999999998874
No 365
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.92 E-value=5.5e-06 Score=45.94 Aligned_cols=25 Identities=28% Similarity=0.553 Sum_probs=21.7
Q ss_pred ccccccccCChhhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+.|++.|...+.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~l~~H~~~H~~ek 36 (36)
T 2elr_A 12 CDMCGKKFKSKGTLKSHKLLHTADG 36 (36)
T ss_dssp CTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred cCcCCCCcCchHHHHHHHHHhcCCC
Confidence 7778888999999999999998774
No 366
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.92 E-value=4.5e-06 Score=43.98 Aligned_cols=25 Identities=28% Similarity=0.650 Sum_probs=22.5
Q ss_pred ccccccccCChhhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+.||+.|...+.|..|+++|++++
T Consensus 6 C~~C~~~f~~~~~l~~H~~~h~~~k 30 (30)
T 2m0d_A 6 CDYCGRSFSDPTSKMRHLETHDTDK 30 (30)
T ss_dssp CTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred CCCCCcccCCHHHHHHHHHHhccCC
Confidence 7889999999999999999998864
No 367
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.91 E-value=5e-06 Score=46.82 Aligned_cols=28 Identities=21% Similarity=0.384 Sum_probs=24.9
Q ss_pred cc--ccccccCChhhHHHHHHHhcCCCCcc
Q 024455 81 CN--LCMNIFDSPSSLIKHKEACSLSAPVP 108 (267)
Q Consensus 81 C~--~C~~~F~~~~~L~~H~~~h~~~~~~~ 108 (267)
|+ .|++.|.+.++|..|+++|++++||.
T Consensus 9 C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~ 38 (38)
T 1bhi_A 9 CTAPGCGQRFTNEDHLAVHKHKHEMTLKFG 38 (38)
T ss_dssp CCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred CCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence 66 59999999999999999999999863
No 368
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.11 E-value=1.7e-06 Score=45.60 Aligned_cols=25 Identities=32% Similarity=0.530 Sum_probs=22.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+.||+.|...+.|..|+++|++++
T Consensus 5 C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2lvt_A 5 CVMCGKAFTQASSLIAHVRQHTGEK 29 (29)
Confidence 7889999999999999999998764
No 369
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.87 E-value=6.4e-06 Score=45.75 Aligned_cols=25 Identities=24% Similarity=0.453 Sum_probs=21.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+.|++.|...+.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2els_A 12 CEYCNKVFKFKHSLQAHLRIHTNEK 36 (36)
T ss_dssp CTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred CCCCCceeCCHHHHHHHHHHhCCCC
Confidence 7788888999999999999998764
No 370
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=97.86 E-value=6.2e-06 Score=44.11 Aligned_cols=24 Identities=21% Similarity=0.360 Sum_probs=21.6
Q ss_pred cccccccCChhhHHHHHHHhcCCC
Q 024455 82 NLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 82 ~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
+.||+.|...+.|..|+++|++++
T Consensus 8 ~~C~k~f~~~~~L~~H~~~H~~~k 31 (31)
T 1sp2_A 8 SYCGKRFTRSDELQRHKRTHTGEK 31 (31)
T ss_dssp TTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred CCCCcccCCHhHHHHHHHHhcCCC
Confidence 389999999999999999999874
No 371
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.85 E-value=7.2e-06 Score=45.46 Aligned_cols=25 Identities=16% Similarity=0.167 Sum_probs=21.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+.|++.|...+.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elt_A 12 CPQCSYASAIKANLNVHLRKHTGEK 36 (36)
T ss_dssp CSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred CCCCCcccCCHHHHHHHHHHccCCC
Confidence 6778888888899999999998764
No 372
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=97.84 E-value=3.4e-06 Score=47.20 Aligned_cols=23 Identities=26% Similarity=0.483 Sum_probs=13.5
Q ss_pred ccccccccCChhhHHHHHHHhcC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSL 103 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~ 103 (267)
|+.|++.|...+.|..|+++|++
T Consensus 14 C~~C~k~f~~~~~l~~H~~~H~~ 36 (37)
T 1p7a_A 14 CPDCDRSFSRSDHLALHRKRHML 36 (37)
T ss_dssp CTTTCCCBSSHHHHHHHHGGGTC
T ss_pred CCCCCcccCcHHHHHHHHHHhcc
Confidence 44455555666666666666654
No 373
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.84 E-value=8.2e-06 Score=46.40 Aligned_cols=24 Identities=17% Similarity=0.191 Sum_probs=20.7
Q ss_pred ccc--cccccCChhhHHHHHHHhcCC
Q 024455 81 CNL--CMNIFDSPSSLIKHKEACSLS 104 (267)
Q Consensus 81 C~~--C~~~F~~~~~L~~H~~~h~~~ 104 (267)
|+. |++.|.+++.|..|+++|+++
T Consensus 12 C~~~~C~k~F~~~~~L~~H~r~Htg~ 37 (38)
T 2eln_A 12 CPTDGCDYSTPDKYKLQAHLKVHTAL 37 (38)
T ss_dssp CSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred CCCCCCCCccCCHHHHHHHHHhcCCC
Confidence 554 889999999999999999876
No 374
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.83 E-value=5.9e-06 Score=45.89 Aligned_cols=25 Identities=16% Similarity=0.264 Sum_probs=19.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+.|++.|...+.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elv_A 12 CHICERKFKNELDRDRHMLVHGDKW 36 (36)
T ss_dssp CSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred CCCCCCccCCHHHHHHHHHHhcCCC
Confidence 6677788888888888888887764
No 375
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.81 E-value=9.2e-06 Score=45.08 Aligned_cols=25 Identities=32% Similarity=0.424 Sum_probs=20.4
Q ss_pred ccccccccCChhhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+.|++.|...+.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elq_A 12 CSLCEYATRSKSNLKAHMNRHSTEK 36 (36)
T ss_dssp CSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred CCCCCchhCCHHHHHHHHHHhccCC
Confidence 6778888888888888988888764
No 376
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=96.99 E-value=3e-06 Score=44.80 Aligned_cols=25 Identities=24% Similarity=0.485 Sum_probs=22.0
Q ss_pred ccccccccCChhhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+.||+.|...+.|..|+++|++++
T Consensus 6 C~~C~k~f~~~~~l~~H~~~h~~~k 30 (30)
T 2lvr_A 6 CIHCQRQFADPGALQRHVRIHTGEK 30 (30)
Confidence 7788999999999999999998764
No 377
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.79 E-value=1.1e-05 Score=43.31 Aligned_cols=25 Identities=32% Similarity=0.559 Sum_probs=22.2
Q ss_pred cc--ccccccCChhhHHHHHHHhcCCC
Q 024455 81 CN--LCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~--~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+ .||+.|...+.|..|+++|++++
T Consensus 6 C~~~~C~k~f~~~~~L~~H~~~H~~~~ 32 (32)
T 1zfd_A 6 CDHPGCDKAFVRNHDLIRHKKSHQEKA 32 (32)
T ss_dssp CCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred CcCCCCCCccCCHHHHHHHHHHccCCC
Confidence 66 78999999999999999999874
No 378
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.77 E-value=1e-05 Score=45.22 Aligned_cols=25 Identities=28% Similarity=0.283 Sum_probs=20.8
Q ss_pred ccccccccCCh-hhHHHHHHHhcCCC
Q 024455 81 CNLCMNIFDSP-SSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~-~~L~~H~~~h~~~~ 105 (267)
|+.|++.|... +.|..|+++|++++
T Consensus 12 C~~C~k~f~~~~~~L~~H~~~H~~~k 37 (37)
T 2elp_A 12 CPYCDFYFMKNGSDLQRHIWAHEGVK 37 (37)
T ss_dssp CSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCChhhccCHHHHHHHHHhcCCCC
Confidence 67788888888 89999999998764
No 379
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.73 E-value=9.7e-06 Score=42.08 Aligned_cols=23 Identities=17% Similarity=0.375 Sum_probs=20.0
Q ss_pred ccccccccCChhhHHHHHHHhcC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSL 103 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~ 103 (267)
|+.|++.|...+.|..|+++|++
T Consensus 6 C~~C~k~f~~~~~l~~H~~~h~~ 28 (28)
T 2kvf_A 6 CSVCGKRFSLKHQMETHYRVHTG 28 (28)
T ss_dssp CSSSCCEESCHHHHHHHHTTSCC
T ss_pred CCCCCcccCCHHHHHHHHHhcCC
Confidence 77888899999999999998864
No 380
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.72 E-value=1.3e-05 Score=41.26 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=19.8
Q ss_pred cccccccccCChhhHHHHHHHhc
Q 024455 80 GCNLCMNIFDSPSSLIKHKEACS 102 (267)
Q Consensus 80 ~C~~C~~~F~~~~~L~~H~~~h~ 102 (267)
.|+.||+.|...+.|..|+++|+
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvh_A 5 SCSLCPQRSRDFSAMTKHLRTHG 27 (27)
T ss_dssp ECSSSSCEESSHHHHHHHHHHCC
T ss_pred cCCCcChhhCCHHHHHHHHHHcc
Confidence 37788899999999999999884
No 381
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.72 E-value=1e-05 Score=42.68 Aligned_cols=25 Identities=32% Similarity=0.585 Sum_probs=21.8
Q ss_pred ccccccccCChhhHHHH-HHHhcCCC
Q 024455 81 CNLCMNIFDSPSSLIKH-KEACSLSA 105 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H-~~~h~~~~ 105 (267)
|+.||+.|.+.+.|..| +++|++++
T Consensus 5 C~~C~k~f~~~~~l~~H~~~~H~~~~ 30 (30)
T 1paa_A 5 CGLCNRAFTRRDLLIRHAQKIHSGNL 30 (30)
T ss_dssp CTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred CcccCcccCChHHHHHHHHHHccCCC
Confidence 77889999999999999 78998764
No 382
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.68 E-value=1.1e-05 Score=41.58 Aligned_cols=22 Identities=32% Similarity=0.428 Sum_probs=18.9
Q ss_pred ccccccccCChhhHHHHHHHhc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACS 102 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~ 102 (267)
|+.||+.|...+.|..|+++|+
T Consensus 6 C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvg_A 6 CPLCRAGCPSLASMQAHMRGHS 27 (27)
T ss_dssp ETTTTEEESCHHHHHHHHTTCC
T ss_pred CCCCCcccCCHHHHHHHHHhcC
Confidence 7788888999999999998874
No 383
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=97.64 E-value=2.2e-05 Score=43.93 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=21.3
Q ss_pred cc--ccccccCChhhHHHHHHHhcCCC
Q 024455 81 CN--LCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 81 C~--~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
|+ .||+.|...+.|..|+++|++++
T Consensus 11 C~~~~C~k~f~~~~~L~~H~~~H~~ek 37 (37)
T 1va1_A 11 CHIQGCGKVYGKTSHLRAHLRWHTGER 37 (37)
T ss_dssp CCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence 55 48889999999999999998874
No 384
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.76 E-value=8.6e-06 Score=41.55 Aligned_cols=22 Identities=27% Similarity=0.461 Sum_probs=18.9
Q ss_pred ccccccccCChhhHHHHHHHhc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACS 102 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~ 102 (267)
|+.||+.|...+.|..|+++|+
T Consensus 5 C~~C~k~f~~~~~l~~H~~~H~ 26 (26)
T 2lvu_A 5 CERCGKRFVQSSQLANHIRHHD 26 (26)
Confidence 7788888999999999998874
No 385
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.54 E-value=3.9e-05 Score=49.31 Aligned_cols=26 Identities=23% Similarity=0.611 Sum_probs=22.8
Q ss_pred ccccccccCChhhHHHHHHHhcCCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAP 106 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~ 106 (267)
|.+|++.|.+.++|..|+++|+++..
T Consensus 16 C~~CgK~F~~~s~L~~H~r~Htg~~~ 41 (66)
T 2epp_A 16 CGLCGKVFTDANRLRQHEAQHGVTSL 41 (66)
T ss_dssp CTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred CCCCCCccCCHHHHHhhhhhhCCCcc
Confidence 67788899999999999999998753
No 386
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=97.48 E-value=4.2e-05 Score=39.73 Aligned_cols=23 Identities=26% Similarity=0.496 Sum_probs=20.8
Q ss_pred cc--ccccccCChhhHHHHHHHhcC
Q 024455 81 CN--LCMNIFDSPSSLIKHKEACSL 103 (267)
Q Consensus 81 C~--~C~~~F~~~~~L~~H~~~h~~ 103 (267)
|+ .||+.|...+.|..|+++|++
T Consensus 5 C~~~~C~k~f~~~~~l~~H~~~H~~ 29 (29)
T 2ab3_A 5 CHFENCGRSFNDRRKLNRHKKIHTG 29 (29)
T ss_dssp ECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred CcCCcCcCccCCHHHHHHHHHHhCC
Confidence 77 899999999999999999964
No 387
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=97.45 E-value=4.1e-05 Score=45.69 Aligned_cols=26 Identities=15% Similarity=0.379 Sum_probs=20.8
Q ss_pred ccccccccCChhhHHHHHH-HhcCCCC
Q 024455 81 CNLCMNIFDSPSSLIKHKE-ACSLSAP 106 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~-~h~~~~~ 106 (267)
|.+||+.|...++|..|++ +|+++.+
T Consensus 10 C~~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 10 CDICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp CTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred CCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence 7778899999999999999 9988764
No 388
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.40 E-value=6.3e-05 Score=41.93 Aligned_cols=24 Identities=21% Similarity=0.265 Sum_probs=16.9
Q ss_pred ccccccccCChhhHHHH-HHHhcCC
Q 024455 81 CNLCMNIFDSPSSLIKH-KEACSLS 104 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H-~~~h~~~ 104 (267)
|+.|++.|...+.|..| +++|+++
T Consensus 12 C~~C~k~f~~~~~L~~H~~~~H~~~ 36 (37)
T 2elm_A 12 CSQCHYSSITKNCLKRHVIQKHSNI 36 (37)
T ss_dssp CSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred CCCCCcccCCHHHHHHHHHHHccCc
Confidence 55667777777777777 7777654
No 389
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.35 E-value=6.9e-05 Score=44.37 Aligned_cols=24 Identities=13% Similarity=0.163 Sum_probs=20.7
Q ss_pred cccccccCChhhHHHHHHHhcCCC
Q 024455 82 NLCMNIFDSPSSLIKHKEACSLSA 105 (267)
Q Consensus 82 ~~C~~~F~~~~~L~~H~~~h~~~~ 105 (267)
+.||+.|...++|..|+++|++++
T Consensus 24 ~~C~k~F~~~~~L~~H~~~H~~ek 47 (47)
T 1ncs_A 24 PGCTKTFKRRYNIRSHIQTHLEDR 47 (47)
T ss_dssp TTCCCEECSSSSHHHHHHHHTTTC
T ss_pred CCCCCccCCHHHHHHHHHHccCCC
Confidence 368888999999999999998874
No 390
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=96.75 E-value=0.0005 Score=49.55 Aligned_cols=31 Identities=23% Similarity=0.487 Sum_probs=24.6
Q ss_pred CCCCCCCCccccccCccccCChHHHHHHHhH
Q 024455 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKI 36 (267)
Q Consensus 6 ~~~~~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (267)
+.-.+|+++|.|..|++.|.+.+.|..|+++
T Consensus 42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rs 72 (124)
T 1zr9_A 42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRS 72 (124)
T ss_dssp CSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred cccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence 3335688888888888888888888888876
No 391
>4hec_A Putative uncharacterized protein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, unknown; 1.80A {Mycobacterium tuberculosis}
Probab=96.66 E-value=0.0027 Score=49.47 Aligned_cols=97 Identities=13% Similarity=0.056 Sum_probs=61.8
Q ss_pred eeeeeccccCCcCCCCccceeeEEEecCCCCeeEecccCC-CCCccccccc--cccCCHHhhccCCCHHHHHHHHHHHHh
Q 024455 137 AVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQP-QLPVTNYRYE--VTGLTEEDIKNAMPLKEVKDKILEILN 213 (267)
Q Consensus 137 ~~~~dcE~~g~~~~~~~~~i~~v~vvd~~~~~~~~~~v~P-~~~i~~~~~~--~~GIt~~~l~~~~~~~~v~~~~~~~~~ 213 (267)
-+.+|||+++.+...++ ..+-+|..+|.+.|...... ...+.+|..+ +.++...-.....+++++..+|.+||.
T Consensus 24 r~FlDTEFt~d~~~~eL---ISIGlV~EdGrEFYav~~d~d~~~~~~wVr~~Vlp~L~~~~~~~~~s~~~i~~~L~~FL~ 100 (190)
T 4hec_A 24 RYFYDTEFIEDGHTIEL---ISIGVVAEDGREYYAVSTEFDPERAGSWVRTHVLPKLPPPASQLWRSRQQIRLDLEEFLR 100 (190)
T ss_dssp EEEEEEEEEECSSCEEE---EEEEEEETTSCEEEEEETTSCGGGCCHHHHHHTGGGSCCTTSTTEECHHHHHHHHHHHTT
T ss_pred EEEEeeeecCCCCCCCE---EEEEEEcCCCCEEEEEecCCChhhCcHHHHhccccCCCCCcccccCCHHHHHHHHHHHHH
Confidence 47899999985554444 44445567777766544321 2334444432 455554333444689999999999994
Q ss_pred cCCCCCcccccCCCceEEEeccchhhhccccc
Q 024455 214 NGESTGRLMLDDGKARLLVGHGLEHDLDSLRM 245 (267)
Q Consensus 214 ~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~ 245 (267)
.... ....|+|++..+|..+|.-
T Consensus 101 ~~~~---------~~~eLwa~~~~yD~~~L~q 123 (190)
T 4hec_A 101 IDGT---------DSIELWAWVGAYDHVALCQ 123 (190)
T ss_dssp TTSS---------CEEEEEESSCHHHHHHHHT
T ss_pred hcCC---------CCCEEEEecccccHHHHHH
Confidence 2111 2346999999999999864
No 392
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.0071 Score=38.30 Aligned_cols=24 Identities=21% Similarity=0.228 Sum_probs=18.9
Q ss_pred ccCccccCChHHHHHHH-hHhcCCCCC
Q 024455 18 VACYKQFKRKDHLIEHM-KISYHSVHQ 43 (267)
Q Consensus 18 ~~C~k~f~~~~~l~~H~-~~~~H~~~~ 43 (267)
..|++.|.+...|..|+ +. |.+.+
T Consensus 7 ~~C~~~f~~~~~l~~Hv~~~--Hv~~~ 31 (64)
T 1zw8_A 7 KECPESASSLFDLQRHLLKD--HVSQD 31 (64)
T ss_dssp TTCCCCCSSHHHHHHHHHHH--SCCCC
T ss_pred CCCCCcCCCHHHHHHHHHhh--ccCcc
Confidence 56889999999999998 46 77654
No 393
>2kfn_A Klenow fragment of DNA polymerase I; complex (polymerase/DNA), exonuclease, transferase, transferase/DNA complex; HET: US1; 2.03A {Escherichia coli} SCOP: c.55.3.5 e.8.1.1 PDB: 1d9f_A* 1d9d_A* 1krp_A* 1ksp_A* 1qsl_A* 1kfs_A* 2kfz_A* 2kzm_A* 2kzz_A* 1dpi_A* 1kfd_A* 1kln_A* 1d8y_A*
Probab=95.79 E-value=0.016 Score=53.55 Aligned_cols=93 Identities=17% Similarity=0.149 Sum_probs=56.9
Q ss_pred ceeeeeccccCCcC-CCCccceeeEEEecCCCCeeEecccCCCCCccccccccccCCHHhhccCCCHHHHHHHHHHHHhc
Q 024455 136 KAVAMDCEMVGGGS-NGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNN 214 (267)
Q Consensus 136 ~~~~~dcE~~g~~~-~~~~~~i~~v~vvd~~~~~~~~~~v~P~~~i~~~~~~~~GIt~~~l~~~~~~~~v~~~~~~~~~~ 214 (267)
.++++|.|++|... .+++..++.+ + ..+... ++.+ . . .+++ +.++++++++++.|.+++.+
T Consensus 27 ~~va~DtEttgl~~~~~~iv~I~~~-~--~~g~~~---yip~-~---~-----~~~~---~~~~l~~~~vl~~L~~~L~d 88 (605)
T 2kfn_A 27 PVFAFDTETDSLDNISANLVGLSFA-I--EPGVAA---YIPV-A---H-----DYLD---APDQISRERALELLKPLLED 88 (605)
T ss_dssp SSEEEEEEESCSCTTTCCEEEEEEE-E--ETTEEE---EEEC-C---C-----CSTT---CCCCCCHHHHHHHHHHHHTC
T ss_pred CeEEEEEecCCCCcccCceEEEEEE-E--cCCcEE---EEec-c---c-----cccc---cccccCHHHHHHHHHHHHcC
Confidence 56899999999864 3444333322 2 123222 2311 1 1 0111 12456789999999999943
Q ss_pred CCCCCcccccCCCceEEEeccchhhhccccc---cCCCCceecccccc
Q 024455 215 GESTGRLMLDDGKARLLVGHGLEHDLDSLRM---NYPDHMLRDTAKYR 259 (267)
Q Consensus 215 ~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~---~~~~~~~~dt~~~~ 259 (267)
.+.++||||+.||+.+|.- ..+. .++||.+..
T Consensus 89 ------------~~i~kV~hnak~D~~~L~~~Gi~l~~-~~~DT~laa 123 (605)
T 2kfn_A 89 ------------EKALKVGQNLKYDRGILANYGIELRG-IAFDTMLES 123 (605)
T ss_dssp ------------TTSCEEESSHHHHHHHHHTTTCCCCC-EEEEHHHHH
T ss_pred ------------CCCeEEEECcHHHHHHHHHCCCCCCC-ccccHHHHH
Confidence 3458999999999999953 3332 478987543
No 394
>1x9m_A DNA polymerase; DNA ploymerase, N-2-acetylaminofluorene, replication block, mutagenesis, transferase/electron transport/DNA complex; HET: DNA 2DT 8FG; 2.10A {Enterobacteria phage T7} SCOP: c.55.3.5 e.8.1.1 PDB: 1skr_A* 1skw_A* 1sl0_A* 1sks_A* 1sl2_A* 1t7p_A* 1t8e_A* 1tk0_A* 1tk5_A* 1tk8_A* 1tkd_A* 1sl1_A* 1x9s_A* 1x9w_A* 1zyq_A* 2ajq_A*
Probab=95.75 E-value=0.0093 Score=56.05 Aligned_cols=84 Identities=17% Similarity=0.095 Sum_probs=52.5
Q ss_pred eeeeeccccCCcCCCCccceeeEEEecCCCCeeEecccCCCCCccccccccccCCHHhhccCCCHHHHHHHHHHHHhcCC
Q 024455 137 AVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGE 216 (267)
Q Consensus 137 ~~~~dcE~~g~~~~~~~~~i~~v~vvd~~~~~~~~~~v~P~~~i~~~~~~~~GIt~~~l~~~~~~~~v~~~~~~~~~~~~ 216 (267)
++++|.|++|...... .+..+.+.+......+ .+.| . .++++++.|.+++.
T Consensus 1 ~vv~D~ETtGl~~~~d--~i~~iqi~~~~~~~~~--~~~p----------------~------~i~~~l~~L~~~l~--- 51 (698)
T 1x9m_A 1 MIVSDIEANALLESVT--KFHCGVIYDYSTAEYV--SYRP----------------S------DFGAYLDALEAEVA--- 51 (698)
T ss_dssp CEEEEEEESSCGGGCC--CEEEEEEEETTTTEEE--EECG----------------G------GHHHHHHHHHHHHH---
T ss_pred CEEEEcCCCCcCCCCC--EEEEEEEEecCCCcEE--EECh----------------H------HHHHHHHHHHHHHh---
Confidence 3789999999864332 3456666654322221 1111 1 23456778888883
Q ss_pred CCCcccccCCCceEEEeccc-hhhhcccc----------ccCCCCceecccccc
Q 024455 217 STGRLMLDDGKARLLVGHGL-EHDLDSLR----------MNYPDHMLRDTAKYR 259 (267)
Q Consensus 217 ~~~~~~~~~~~~~~lvgh~~-~~Dl~~l~----------~~~~~~~~~dt~~~~ 259 (267)
.+.++||||+ .||+.+|. +..+...++||.+..
T Consensus 52 ----------~~~~kV~HNa~kfD~~~L~~~~~~~~~~Gi~l~~~~~~DTmlaa 95 (698)
T 1x9m_A 52 ----------RGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLS 95 (698)
T ss_dssp ----------TTCCEEESSTTTTHHHHHHHHHHHHHCCCCCCCGGGEEEHHHHH
T ss_pred ----------cCCeEEEcCChHHHHHHHHHhhhhcccCCccCCCCcchhHHHHH
Confidence 2468999999 99999994 323313588998544
No 395
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.41 E-value=0.018 Score=33.48 Aligned_cols=24 Identities=33% Similarity=0.591 Sum_probs=21.8
Q ss_pred CccccccCccccCChHHHHHHHhH
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKI 36 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~ 36 (267)
-+|.|+.|+..|.....|+.||+.
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmky 34 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMCY 34 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhhh
Confidence 689999999999999999999986
No 396
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=95.21 E-value=0.01 Score=37.54 Aligned_cols=40 Identities=15% Similarity=0.089 Sum_probs=20.5
Q ss_pred cccccCChhhHHHHH-HHhcCCC------Ccc-----ccccCcchhhhhhhc
Q 024455 84 CMNIFDSPSSLIKHK-EACSLSA------PVP-----FEKTLSNAESQKKIS 123 (267)
Q Consensus 84 C~~~F~~~~~L~~H~-~~h~~~~------~~~-----C~~~f~~~~~l~~H~ 123 (267)
|++.|.+...|..|+ +.|.+.+ +|. |++.+.....|..|+
T Consensus 9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hi 60 (64)
T 1zw8_A 9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHI 60 (64)
T ss_dssp CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhc
Confidence 555566666666665 3454443 232 455444445555554
No 397
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=95.15 E-value=0.013 Score=42.55 Aligned_cols=74 Identities=18% Similarity=0.277 Sum_probs=43.5
Q ss_pred CCccccccCccccCChHHHHHHH--hHhcCCCC-CC-Ccccc-------hhhcCCHHHHHhhcCCCCCCCcCCccccccc
Q 024455 12 TARHKCVACYKQFKRKDHLIEHM--KISYHSVH-QP-KCAVC-------QKLSKSFESLREHLTGPLSKAHCSGIFSDRG 80 (267)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~--~~~~H~~~-~~-~C~~C-------~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~ 80 (267)
.+++.|..|...|.+.+.+..|. +. |... +. .+ .+ ++.+.... +. .. ...-....
T Consensus 30 ~~~~~C~~C~v~~~S~s~~~~H~~gkk--H~~~v~~~~~-~~~~~~~~~~~~~~~~~----~~------~~-~~~~~~~~ 95 (127)
T 1zu1_A 30 FSDTQCKVCSAVLISESQKLAHYQSRK--HANKVRRYMA-INQGEDSVPAKKFKAAP----AE------IS-DGEDRSKC 95 (127)
T ss_dssp BCSSEETTTTEECCSHHHHHHHHHCHH--HHHHHHHHHH-HTTCCCCCSCCCCSCCS----SC------CS-SCCCTTTE
T ss_pred CCCCcCcCCCCEeCCHHHHHHHHCcHH--HHHHHHHHhc-ccCcccCCCCCccCCCc----cc------cc-cCCCCCeE
Confidence 36789999999999999999998 44 4321 11 11 01 11111000 00 00 00001113
Q ss_pred ccccccccCChhhHHHHHH
Q 024455 81 CNLCMNIFDSPSSLIKHKE 99 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~ 99 (267)
|..|++.|.+...|..|..
T Consensus 96 C~~C~~~f~s~~~~~~H~~ 114 (127)
T 1zu1_A 96 CPVCNMTFSSPVVAESHYI 114 (127)
T ss_dssp ETTTTEECSSHHHHHHHHT
T ss_pred cCCCCCEeCCHHHHHHHHC
Confidence 9999999999999999974
No 398
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.75 E-value=0.048 Score=31.66 Aligned_cols=22 Identities=27% Similarity=0.448 Sum_probs=18.2
Q ss_pred cccccccccCChhhHHHHHHHh
Q 024455 80 GCNLCMNIFDSPSSLIKHKEAC 101 (267)
Q Consensus 80 ~C~~C~~~F~~~~~L~~H~~~h 101 (267)
.|+.|+..|.....|+.||+-.
T Consensus 14 ~CPrCn~~f~~~~sLr~Hmkyc 35 (49)
T 2e72_A 14 ICPRCNAQFRVTEALRGHMCYC 35 (49)
T ss_dssp CCTTTCCCCSSHHHHHHHHHHH
T ss_pred eCCcccccccchHHHHhhhhhc
Confidence 3888899999999999999743
No 399
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=93.41 E-value=0.016 Score=41.64 Aligned_cols=21 Identities=24% Similarity=0.439 Sum_probs=16.0
Q ss_pred ccccccccCChhhHHHHHHHh
Q 024455 81 CNLCMNIFDSPSSLIKHKEAC 101 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h 101 (267)
|..|++.|.+.+.|..|+++.
T Consensus 53 C~~C~K~F~~~~~L~~H~rsK 73 (124)
T 1zr9_A 53 CLACARYFIDSTNLKTHFRSK 73 (124)
T ss_dssp ETTTTEECSSHHHHHHHTTCH
T ss_pred cccCcchhCCHHHHHHHHhhh
Confidence 566778888888888887643
No 400
>1qht_A Protein (DNA polymerase); archaea, hyperthermostable, family B polymer alpha family polymerase, transferase; 2.10A {Thermococcus SP} SCOP: c.55.3.5 e.8.1.1 PDB: 1tgo_A 2xhb_A* 2vwj_A* 2vwk_A* 1wns_A* 1wn7_A 1qqc_A* 4ahc_A* 4ail_C* 3a2f_A* 2jgu_A* 1d5a_A
Probab=91.62 E-value=0.37 Score=45.78 Aligned_cols=86 Identities=10% Similarity=0.058 Sum_probs=54.4
Q ss_pred CCCceeeeeccccCCcC-CCCccceeeEEEecCCCCeeEecccCCCCCccccccccccCCHHhhccCCCHHHHHHHHHHH
Q 024455 133 RGPKAVAMDCEMVGGGS-NGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEI 211 (267)
Q Consensus 133 ~~~~~~~~dcE~~g~~~-~~~~~~i~~v~vvd~~~~~~~~~~v~P~~~i~~~~~~~~GIt~~~l~~~~~~~~v~~~~~~~ 211 (267)
....+.++|.|+.+..+ ......+..+++.+..+..++.. + .+..+.+...++..+++..+.++
T Consensus 133 ~~l~ilsfDIEt~~~~~p~~~~d~Ii~Is~~~~~~~~~~t~--~-------------~i~~~~v~~~~~E~~LL~~f~~~ 197 (775)
T 1qht_A 133 EELTMLAFAIATLYHEGEEFGTGPILMISYADGSEARVITW--K-------------KIDLPYVDVVSTEKEMIKRFLRV 197 (775)
T ss_dssp CCCCEEEEEEEECCCTTCCTTCSCEEEEEEECSSCEEEEES--S-------------CCCCSSEEECSCHHHHHHHHHHH
T ss_pred CCcEEEEEEEEEcCCCCCCCCCCcEEEEEEEecCCCeeEee--c-------------cccccceEEcCCHHHHHHHHHHH
Confidence 35577999999998432 22334455666655444332210 1 12222455668889999999999
Q ss_pred HhcCCCCCcccccCCCceEEEeccc-hhhhcccc
Q 024455 212 LNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR 244 (267)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~lvgh~~-~~Dl~~l~ 244 (267)
+.. .+| .+|||||+ .|||.+|.
T Consensus 198 i~~------~dP-----DiivGyN~~~FDlpyL~ 220 (775)
T 1qht_A 198 VRE------KDP-----DVLITYNGDNFDFAYLK 220 (775)
T ss_dssp HHH------HCC-----SEEEESSTTTTHHHHHH
T ss_pred HHh------cCC-----CEEEEeCCCCccHHHHH
Confidence 942 222 39999998 68999984
No 401
>1s5j_A DNA polymerase I; replication, disulfide bonds, transferase; HET: DNA; 2.40A {Sulfolobus solfataricus} SCOP: c.55.3.5 e.8.1.1
Probab=91.52 E-value=0.52 Score=45.21 Aligned_cols=95 Identities=14% Similarity=0.051 Sum_probs=55.4
Q ss_pred cCCCceeeeeccc-cCC--cCCCC---ccceeeEEEecCCCCeeEecccCCCCCccccccccccCCHHhhccCCCHHHHH
Q 024455 132 CRGPKAVAMDCEM-VGG--GSNGT---LDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVK 205 (267)
Q Consensus 132 ~~~~~~~~~dcE~-~g~--~~~~~---~~~i~~v~vvd~~~~~~~~~~v~P~~~i~~~~~~~~GIt~~~l~~~~~~~~v~ 205 (267)
...-.+.++|.|+ ++. .+... ...+..+.+++.++...+ ..+++... ...... |....+...++..+++
T Consensus 187 ~p~l~ilsfDIEt~s~~~g~fP~~~~~~d~Ii~Is~~~~~g~~~~-~~~~~~~~-~~~~~~---i~~~~v~~~~~E~~LL 261 (847)
T 1s5j_A 187 IPKIKRVAIDIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLKKV-LVLNRNDV-NEGSVK---LDGISVERFNTEYELL 261 (847)
T ss_dssp CCCCCEEEEEEEECCSSSSCCCCTTTCCSCEEEEEEEETTSCEEE-EEECSSCC-CCCCEE---ETTEEEEEESSHHHHH
T ss_pred CCCceEEEEEEEeCcCCCCCCCCccccCCcEEEEEEEccCCCcEE-EEEeCCcc-cccccC---CCCCeEEEeCCHHHHH
Confidence 3455779999999 642 22222 134566666655553322 12333210 000011 2223345557899999
Q ss_pred HHHHHHHhcCCCCCcccccCCCceEEEeccc-hhhhcccc
Q 024455 206 DKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR 244 (267)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~Dl~~l~ 244 (267)
..+.+++.+ - .+|||||. .|||.+|.
T Consensus 262 ~~f~~~i~~------------~-diivgyN~~~FDlPyL~ 288 (847)
T 1s5j_A 262 GRFFDILLE------------Y-PIVLTFNGDDFDLPYIY 288 (847)
T ss_dssp HHHHHHHTT------------C-SEEEESSTTTTHHHHHH
T ss_pred HHHHHHhcc------------C-CEEEEeCCCCchHHHHH
Confidence 999999942 2 29999998 68999994
No 402
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=91.46 E-value=0.17 Score=27.36 Aligned_cols=28 Identities=25% Similarity=0.513 Sum_probs=23.9
Q ss_pred ccccccCccccCChHHHHHHHhHhcCCCC
Q 024455 14 RHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (267)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~~ 42 (267)
.|.|+.|-+.|.+...|..|.... |...
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~-H~~~ 32 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAV-HDAG 32 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHH-TSSS
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhc-cccC
Confidence 499999999999999999998764 7643
No 403
>1noy_A Protein (DNA polymerase (E.C.2.7.7.7)); exonuclease, DNA-binding, complex (nucleotidyltransferase/DNA); HET: DNA; 2.20A {Enterobacteria phage T4} SCOP: c.55.3.5 PDB: 1noz_A*
Probab=90.80 E-value=1.4 Score=38.08 Aligned_cols=101 Identities=8% Similarity=0.084 Sum_probs=56.3
Q ss_pred CCCceeeeeccccCCcCCCC---ccceeeEEEecCCCCeeEe-cccCC-CCCcccccc---------ccccCCHH---hh
Q 024455 133 RGPKAVAMDCEMVGGGSNGT---LDLCARVCLVDEDENVIFH-TYVQP-QLPVTNYRY---------EVTGLTEE---DI 195 (267)
Q Consensus 133 ~~~~~~~~dcE~~g~~~~~~---~~~i~~v~vvd~~~~~~~~-~~v~P-~~~i~~~~~---------~~~GIt~~---~l 195 (267)
+...+.++|.|+.+.++... ...+..+++.+..+..... .++++ .....++.. .+....+. .+
T Consensus 104 p~l~vlsfDIEt~~~~fP~~~~~~d~Ii~Is~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v 183 (388)
T 1noy_A 104 KFVRVANCDIEVTGDKFPDPMKAEYEIDAITHYDSIDDRFYVFDLLNSMYGSVSKWDAKLAAKLDCEGGDEVPQEILDRV 183 (388)
T ss_dssp GGCCEEEEEEEECCSSCCCTTTCCSCEEEEEEEETTTTEEEEEEECCCSSCCCCCCCHHHHHSCGGGTCCCCCHHHHTTE
T ss_pred CCeEEEEEEEEeCCCCCCCCCCCCCeEEEEEEEEecCCeEEEEEEeeccCCCCCccccccccccccccccccccccCCCe
Confidence 45567899999988323221 2356677777665543211 12332 111111111 01111111 11
Q ss_pred --ccCCCHHHHHHHHHHHHhcCCCCCcccccCCCceEEEeccc-hhhhcccc
Q 024455 196 --KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR 244 (267)
Q Consensus 196 --~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~Dl~~l~ 244 (267)
....+..+++..+.+++.. .+| .||+|||+ .|||.+|.
T Consensus 184 ~v~~~~~E~~LL~~f~~~i~~------~dP-----Dii~GyN~~~FDlpyL~ 224 (388)
T 1noy_A 184 IYMPFDNERDMLMEYINLWEQ------KRP-----AIFTGWNIEGFDVPYIM 224 (388)
T ss_dssp EEEEESCHHHHHHHHHHHHHH------SCC-----SEEECSSTTTTHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHH------hCC-----cEEEecCCCCccHHHHH
Confidence 2456889999999999942 122 39999998 68999984
No 404
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=90.64 E-value=0.097 Score=30.25 Aligned_cols=20 Identities=25% Similarity=0.574 Sum_probs=13.5
Q ss_pred CCCCcCCccccccc--------cccccc
Q 024455 67 LSKAHCSGIFSDRG--------CNLCMN 86 (267)
Q Consensus 67 ~~C~~C~k~f~~~~--------C~~C~~ 86 (267)
|.|-.||+.|+... |+.||.
T Consensus 4 Y~C~rCg~~fs~~el~~lP~IrCpyCGy 31 (48)
T 4ayb_P 4 YRCGKCWKTFTDEQLKVLPGVRCPYCGY 31 (48)
T ss_dssp -CCCCTTTTCCCCCSCCCSSSCCTTTCC
T ss_pred EEeeccCCCccHHHHhhCCCcccCccCc
Confidence 66777777777653 788874
No 405
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=89.89 E-value=0.36 Score=26.23 Aligned_cols=28 Identities=14% Similarity=0.382 Sum_probs=23.7
Q ss_pred CCCCCccccccCccccCChHHHHHHHhH
Q 024455 9 KRSTARHKCVACYKQFKRKDHLIEHMKI 36 (267)
Q Consensus 9 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (267)
......+.|..|.-+|+.-..+..|++-
T Consensus 3 ~~~~~~~~C~~C~IsF~~l~ty~aHKk~ 30 (36)
T 1fu9_A 3 AAEVMKKYCSTCDISFNYVKTYLAHKQF 30 (36)
T ss_dssp CCCCCCSEETTTTEECSSHHHHHHHHHH
T ss_pred CCccCcCeeccccceehhhHHHhhhhee
Confidence 3456688999999999999999999875
No 406
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=87.88 E-value=0.21 Score=33.27 Aligned_cols=25 Identities=28% Similarity=0.425 Sum_probs=21.3
Q ss_pred ccccccccCChhhHHHHHHHhcCCCCcc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~~~~~~~ 108 (267)
|-+||+.|. .|.+|+++|+|-.|.+
T Consensus 24 ClecGK~fK---~LkRHL~~~hgltpee 48 (87)
T 2jsp_A 24 CLECGGSFK---SLKRHLTTHHSMTPEE 48 (87)
T ss_dssp CTBTCCEES---BHHHHHHHTTCSCHHH
T ss_pred ecccchhhH---HHHHHHHHccCCCHHH
Confidence 888999998 5889999988887755
No 407
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=84.76 E-value=0.6 Score=25.17 Aligned_cols=22 Identities=41% Similarity=0.712 Sum_probs=18.5
Q ss_pred ccccccccCChhhHHHHHHHhc
Q 024455 81 CNLCMNIFDSPSSLIKHKEACS 102 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h~ 102 (267)
|++|.+.|.+...|..|-...|
T Consensus 8 CP~C~~~l~s~~~L~~Hye~~H 29 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHYEAVH 29 (34)
T ss_dssp CTTTCCEESSHHHHHHHHHHHT
T ss_pred CcHHHHHcCCHHHHHHHHHhcc
Confidence 8999999999999999965433
No 408
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=84.52 E-value=0.44 Score=36.08 Aligned_cols=83 Identities=17% Similarity=0.340 Sum_probs=38.8
Q ss_pred ccccCccccCChH-----HHHHHHhHhcCCCCCC-Cc--ccchhhcCCHHHHHhhcC----CCCCCCcCCcccccc----
Q 024455 16 KCVACYKQFKRKD-----HLIEHMKISYHSVHQP-KC--AVCQKLSKSFESLREHLT----GPLSKAHCSGIFSDR---- 79 (267)
Q Consensus 16 ~C~~C~k~f~~~~-----~l~~H~~~~~H~~~~~-~C--~~C~~~f~~~~~l~~H~~----~~~~C~~C~k~f~~~---- 79 (267)
.|+.|...+.... .+..-+. ... .| .-|+..+. ...+..|.. .+..|+.|+..+...
T Consensus 55 ~CP~Cr~~~~~~~~~~~~~~~~~i~------~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~~r~~l~~ 127 (170)
T 3hcs_A 55 KCPVDNEILLENQLFPDNFAKREIL------SLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPFQKFHINI 127 (170)
T ss_dssp BCTTTCCBCCGGGCEECHHHHHHHH------TSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEEEGGGHHH
T ss_pred CCCCCccCcchhhhhhhHHHHHHHh------hcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHHHHHHHHH
Confidence 7888877765431 1111111 122 56 35665543 456777761 223354444444332
Q ss_pred -----------cccccccccCChhhHHHHHHHhcCCCC
Q 024455 80 -----------GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (267)
Q Consensus 80 -----------~C~~C~~~F~~~~~L~~H~~~h~~~~~ 106 (267)
.|+.|+..|. ...|..|+.++.|+.+
T Consensus 128 H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~ 164 (170)
T 3hcs_A 128 HILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALE 164 (170)
T ss_dssp HHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC---
T ss_pred HhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhh
Confidence 1555555443 3445555555555443
No 409
>3qex_A DNA polymerase, GP43; difluorotoluene nucleoside; HET: DNA DOC DGT; 1.73A {Enterobacteria phage RB69} PDB: 3qei_A* 3qer_A* 3qes_A* 3qet_A* 3qep_A* 3qew_A* 3qev_A* 3s9h_A* 3sq0_A* 4dtn_A* 4dto_A* 4dtp_A* 4dtr_A* 4dts_A* 4dtu_A* 4dtx_A* 4e3s_A* 4fjm_A* 4fjl_A* 3spz_A* ...
Probab=84.39 E-value=2.6 Score=40.56 Aligned_cols=99 Identities=13% Similarity=0.095 Sum_probs=61.6
Q ss_pred CCceeeeeccccCCc-CC---CCccceeeEEEecCCCCeeEec--ccCCCCCccccccc---------cccCCHHhhcc-
Q 024455 134 GPKAVAMDCEMVGGG-SN---GTLDLCARVCLVDEDENVIFHT--YVQPQLPVTNYRYE---------VTGLTEEDIKN- 197 (267)
Q Consensus 134 ~~~~~~~dcE~~g~~-~~---~~~~~i~~v~vvd~~~~~~~~~--~v~P~~~i~~~~~~---------~~GIt~~~l~~- 197 (267)
.-+..++|.|....+ +. .....|..|++.|..+...+-. +..|...+.+|... -..+..+.+.+
T Consensus 107 ~ir~~~~DIEv~~~~~fPd~~~~~~~Ii~It~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 186 (903)
T 3qex_A 107 KIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKI 186 (903)
T ss_dssp GSCEEEEEEECCCTTSSCCTTTCCSCCCEEEEEETTTTEEEEEEECEETTEECCCCCHHHHHSCGGGTCCCCCHHHHTTE
T ss_pred cccEEEEeEEeCCCCCCCCcccCCCCEEEEEEEeCCCCEEEEEEeeccccccccccccccccccccccccccccccCCCe
Confidence 445688999987633 22 2246678888888877665442 22233333334321 12244444443
Q ss_pred ----CCCHHHHHHHHHHHHhcCCCCCcccccCCCceEEEeccc-hhhhccc
Q 024455 198 ----AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSL 243 (267)
Q Consensus 198 ----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~Dl~~l 243 (267)
-.+-.+++..+.+++.. .+| .||+|||+ .|||.+|
T Consensus 187 ~v~~f~sE~eLL~~F~~~I~~------~DP-----DIItGyN~~~FDlPYL 226 (903)
T 3qex_A 187 IYMPFDNEKELLMEYLNFWQQ------KTP-----VILTGWNVESFAIPYV 226 (903)
T ss_dssp EEEEESSHHHHHHHHHHHHHH------TCC-----SEEECSSTTTTHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHH------hCC-----CEEEecCCccCCHHHH
Confidence 35788999999999942 222 39999998 6899998
No 410
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=83.74 E-value=0.47 Score=32.73 Aligned_cols=25 Identities=20% Similarity=0.428 Sum_probs=15.8
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCcc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGI 75 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~ 75 (267)
+|..||..|. .-+.+|-.|+.|+..
T Consensus 69 ~C~~CG~~F~------~~~~kPsrCP~CkSe 93 (105)
T 2gmg_A 69 QCRKCGFVFK------AEINIPSRCPKCKSE 93 (105)
T ss_dssp BBTTTCCBCC------CCSSCCSSCSSSCCC
T ss_pred ChhhCcCeec------ccCCCCCCCcCCCCC
Confidence 8888888881 122456667777544
No 411
>2a1r_A Poly(A)-specific ribonuclease PARN; DEDD, nuclease domain, hydrolase-RNA complex; 2.60A {Homo sapiens} PDB: 2a1s_A
Probab=82.05 E-value=0.4 Score=42.22 Aligned_cols=31 Identities=26% Similarity=0.417 Sum_probs=24.5
Q ss_pred CceEEEeccchhhhccc-------------------cccCCCCceecccccc
Q 024455 227 KARLLVGHGLEHDLDSL-------------------RMNYPDHMLRDTAKYR 259 (267)
Q Consensus 227 ~~~~lvgh~~~~Dl~~l-------------------~~~~~~~~~~dt~~~~ 259 (267)
.+++|||||.-.||-+| .-.+| .|+||-.+.
T Consensus 280 s~KpiVGHN~llDl~~l~~~F~~pLP~~~~eFk~~i~~lFP--~i~DTK~la 329 (430)
T 2a1r_A 280 SGKLVIGHNMLLDVMHTVHQFYCPLPADLSEFKEMTTCVFP--RLLDTKLMA 329 (430)
T ss_dssp HCCEEEESSCHHHHHHHHHHHTCCCCSSHHHHHHHHHHHCS--SEEEHHHHH
T ss_pred CCCceEechhHHHHHHHHHHhccCCCCCHHHHHHHHHHHCC--ceeehHHhh
Confidence 56899999999999876 22568 689997654
No 412
>3ikm_A DNA polymerase subunit gamma-1; human mitochondrial DNA polymerase, disease mutation, DNA replication, DNA-binding, DNA-directed DNA polymerase; HET: DNA; 3.24A {Homo sapiens}
Probab=81.87 E-value=0.47 Score=46.03 Aligned_cols=30 Identities=27% Similarity=0.387 Sum_probs=23.2
Q ss_pred CceEEEeccchhhhccccc----cCCCCceeccc
Q 024455 227 KARLLVGHGLEHDLDSLRM----NYPDHMLRDTA 256 (267)
Q Consensus 227 ~~~~lvgh~~~~Dl~~l~~----~~~~~~~~dt~ 256 (267)
..+|||||||.||...++= .-.+...+||-
T Consensus 193 ~~rlIVGHNVsyDRARI~EeY~l~~sk~rFlDTM 226 (1172)
T 3ikm_A 193 QEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTM 226 (1172)
T ss_dssp SCCCCBCBCSSSSTTGGGTSSCSSCCCCCCCBTT
T ss_pred CccEEEeCCcchhHHHHHHHHhcccCCceeeech
Confidence 5689999999999988853 33466777874
No 413
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=81.55 E-value=0.97 Score=26.95 Aligned_cols=22 Identities=14% Similarity=0.415 Sum_probs=17.9
Q ss_pred cccccCccccCChHHHHHHHhH
Q 024455 15 HKCVACYKQFKRKDHLIEHMKI 36 (267)
Q Consensus 15 ~~C~~C~k~f~~~~~l~~H~~~ 36 (267)
-.|..|+..|..+..++.|+-+
T Consensus 14 ~eC~lC~vkYs~r~slqDHIFs 35 (55)
T 2yrk_A 14 PECTLCGVKYSARLSIRDHIFS 35 (55)
T ss_dssp SCCTTTTCCCCSSSCHHHHHTS
T ss_pred ccccccCcccccccchhhhhcc
Confidence 4888888888888888888744
No 414
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=81.24 E-value=1.2 Score=31.93 Aligned_cols=27 Identities=15% Similarity=0.145 Sum_probs=20.3
Q ss_pred CCCCccccccCccccCChHHHHHHHhH
Q 024455 10 RSTARHKCVACYKQFKRKDHLIEHMKI 36 (267)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (267)
.+.+.|.|..|.+.|.+...+..|...
T Consensus 89 ~~~~~~~C~~C~~~f~s~~~~~~H~~g 115 (127)
T 1zu1_A 89 GEDRSKCCPVCNMTFSSPVVAESHYIG 115 (127)
T ss_dssp CCCTTTEETTTTEECSSHHHHHHHHTS
T ss_pred CCCCCeEcCCCCCEeCCHHHHHHHHCC
Confidence 456677888888888888888888743
No 415
>3iay_A DNA polymerase delta catalytic subunit; protein-DNA complex, DNA replication, DNA-BI DNA-directed DNA polymerase, exonuclease, hydrolase; HET: DNA DOC DCP; 2.00A {Saccharomyces cerevisiae}
Probab=81.10 E-value=1.8 Score=41.82 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=31.2
Q ss_pred HhhccCCCHHHHHHHHHHHHhcCCCCCcccccCCCceEEEeccc-hhhhccc
Q 024455 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSL 243 (267)
Q Consensus 193 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~Dl~~l 243 (267)
..+...++..+++..+.+++.. .+| .||+|||+ .|||.+|
T Consensus 305 ~~V~~~~sE~eLL~~F~~~i~~------~DP-----DIIvGyNi~~FDlpyL 345 (919)
T 3iay_A 305 SMIFSHATEEEMLSNWRNFIIK------VDP-----DVIIGYNTTNFDIPYL 345 (919)
T ss_dssp BEEEEESSHHHHHHHHHHHHHH------HCC-----SEEEESSTTTTHHHHH
T ss_pred CeEEECCCHHHHHHHHHHHHHH------hCC-----CEEEecCCccCCHHHH
Confidence 3455667899999999999942 222 39999999 6899999
No 416
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=79.24 E-value=1.3 Score=23.17 Aligned_cols=21 Identities=29% Similarity=0.692 Sum_probs=18.4
Q ss_pred ccccccccCChhhHHHHHHHh
Q 024455 81 CNLCMNIFDSPSSLIKHKEAC 101 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H~~~h 101 (267)
|..|.+.|+...+|..|+|.-
T Consensus 12 crfckkkysdvknlikhire~ 32 (37)
T 2elu_A 12 CRFCKKKYSDVKNLIKHIRDA 32 (37)
T ss_dssp ETTTTEECSSHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 889999999999999998753
No 417
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=79.12 E-value=0.76 Score=31.70 Aligned_cols=25 Identities=20% Similarity=0.501 Sum_probs=18.6
Q ss_pred CCCCCCCcCCcccc-----ccccccccccc
Q 024455 64 TGPLSKAHCSGIFS-----DRGCNLCMNIF 88 (267)
Q Consensus 64 ~~~~~C~~C~k~f~-----~~~C~~C~~~F 88 (267)
..++.|..||..|. ...|+.|+...
T Consensus 65 v~p~~C~~CG~~F~~~~~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 65 IKPAQCRKCGFVFKAEINIPSRCPKCKSEW 94 (105)
T ss_dssp ECCCBBTTTCCBCCCCSSCCSSCSSSCCCC
T ss_pred EECcChhhCcCeecccCCCCCCCcCCCCCc
Confidence 45889999999992 12499997654
No 418
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=78.89 E-value=0.76 Score=34.70 Aligned_cols=61 Identities=20% Similarity=0.376 Sum_probs=35.3
Q ss_pred ccc--ccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhhc-----CCCCCCCcCCccccccc
Q 024455 15 HKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDRG 80 (267)
Q Consensus 15 ~~C--~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~C~~C~k~f~~~~ 80 (267)
..| ..|+..+. ...|..|... -.-.+ .|+.|+..+ .+..|..|. .+.-.|+.|+..|....
T Consensus 83 v~C~n~GC~~~~~-~~~l~~H~~~---C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~~ 151 (170)
T 3hcs_A 83 VKCPNEGCLHKME-LRHLEDHQAH---CEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFED 151 (170)
T ss_dssp EECCSTTCCCEEE-GGGHHHHHTT---CTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGGG
T ss_pred cCCCCCCCCceec-HhHHHHHHhc---CCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHHH
Confidence 445 45665544 4456667532 22334 777777766 456677776 23344777777766543
No 419
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.72 E-value=1 Score=29.23 Aligned_cols=25 Identities=24% Similarity=0.445 Sum_probs=18.3
Q ss_pred cccccccccC-------ChhhHHHHHHHhcCC
Q 024455 80 GCNLCMNIFD-------SPSSLIKHKEACSLS 104 (267)
Q Consensus 80 ~C~~C~~~F~-------~~~~L~~H~~~h~~~ 104 (267)
.|..|++.+. ..++|.+|++.+|.+
T Consensus 30 ~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~ 61 (76)
T 2djr_A 30 TCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE 61 (76)
T ss_dssp EESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred ECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence 4777777776 367899999877643
No 420
>3saf_A Exosome component 10; exoribonuclease, RNA exosome, hydrolase; 2.50A {Homo sapiens} PDB: 3sag_A 3sah_A 2cpr_A
Probab=78.25 E-value=2.6 Score=36.98 Aligned_cols=41 Identities=24% Similarity=0.198 Sum_probs=28.1
Q ss_pred HHHHHHHhcCCCCCcccccCCCceEEEeccchhhhcccc--ccCCCCceeccccc
Q 024455 206 DKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR--MNYPDHMLRDTAKY 258 (267)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~--~~~~~~~~~dt~~~ 258 (267)
..|.+++.+ .+.+-||||+.+|+.+|. ....-..++||.+.
T Consensus 172 ~~L~~lL~d------------p~i~KV~H~~k~Dl~~L~~~~Gi~~~~~fDT~lA 214 (428)
T 3saf_A 172 YILNESLTD------------PAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQA 214 (428)
T ss_dssp GGGHHHHTC------------TTSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHH
T ss_pred HHHHHHHcC------------CCceEEEeehHHHHHHHHHHcCCCcCceeechhH
Confidence 456677854 456789999999999994 22212357898744
No 421
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=76.66 E-value=0.68 Score=30.62 Aligned_cols=27 Identities=19% Similarity=0.334 Sum_probs=18.1
Q ss_pred CCCCCCCcCCccccc------ccccccccccCC
Q 024455 64 TGPLSKAHCSGIFSD------RGCNLCMNIFDS 90 (267)
Q Consensus 64 ~~~~~C~~C~k~f~~------~~C~~C~~~F~~ 90 (267)
...|.|+.||+.... +.|+.|++.|.-
T Consensus 25 ~~~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~ag 57 (83)
T 1vq8_Z 25 NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTG 57 (83)
T ss_dssp HSCEECSSSCCEEEEEEETTEEEETTTCCEEEC
T ss_pred cccCcCCCCCCcceeccCCCeEECCCCCCEecC
Confidence 346788888874332 238888888764
No 422
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=76.33 E-value=1.8 Score=27.69 Aligned_cols=26 Identities=15% Similarity=0.377 Sum_probs=13.9
Q ss_pred CCCCCCcCCcccccc------cccccccccCC
Q 024455 65 GPLSKAHCSGIFSDR------GCNLCMNIFDS 90 (267)
Q Consensus 65 ~~~~C~~C~k~f~~~------~C~~C~~~F~~ 90 (267)
..|.|+.||+.-... .|..|++.|.-
T Consensus 25 ~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AG 56 (72)
T 3jyw_9 25 ARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAG 56 (72)
T ss_dssp SCBCCSSCCSSCBSBCSSSCBCCSSSCCCCCC
T ss_pred cCccCCCCCCceeEecCCCeEECCCCCCEEeC
Confidence 356666666542221 26666666653
No 423
>3d45_A Poly(A)-specific ribonuclease PARN; CAP analogue, exonuclease, hydrolase, magnesium, metal nonsense-mediated mRNA decay, nucleus; HET: 7MG GDP; 3.00A {Mus musculus}
Probab=75.03 E-value=0.87 Score=40.97 Aligned_cols=32 Identities=28% Similarity=0.389 Sum_probs=25.4
Q ss_pred CceEEEeccchhhhccc-------------------cccCCCCceeccccccc
Q 024455 227 KARLLVGHGLEHDLDSL-------------------RMNYPDHMLRDTAKYRP 260 (267)
Q Consensus 227 ~~~~lvgh~~~~Dl~~l-------------------~~~~~~~~~~dt~~~~~ 260 (267)
.+++|||||.-.||-+| +..+| .|+||-.+..
T Consensus 275 ~~kpiVgHN~l~Dl~~l~~~F~~pLP~~~~eFk~~i~~lFP--~i~DTK~la~ 325 (507)
T 3d45_A 275 SGKLVVGHNMLLDVMHTIHQFYCPLPADLNEFKEMAICVFP--RLLDTKLMAS 325 (507)
T ss_dssp HCCEEEESSCHHHHHHHHHHHTCSCCSSHHHHHHHHHHHCS--CEEEHHHHTT
T ss_pred CCCeEEEechHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCC--ceeEhHhhhh
Confidence 45799999999999888 23578 6899986654
No 424
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=73.64 E-value=0.54 Score=30.56 Aligned_cols=18 Identities=39% Similarity=0.598 Sum_probs=11.2
Q ss_pred CcccchhhcCCHHHHHhhc
Q 024455 45 KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~ 63 (267)
+|+.||....+.. |...|
T Consensus 10 ~~PlCG~~L~W~e-LIeQM 27 (95)
T 2k5c_A 10 KCPICGSPLKWEE-LIEEM 27 (95)
T ss_dssp ECSSSCCEECHHH-HHHHS
T ss_pred cCCcCCCccCHHH-HHHHH
Confidence 7888887776543 44444
No 425
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=72.59 E-value=0.74 Score=29.93 Aligned_cols=46 Identities=22% Similarity=0.320 Sum_probs=27.5
Q ss_pred CccccccCccccCChHHHHHHHhHhcCCCCCC-CcccchhhcCCHHHHHhh
Q 024455 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (267)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~-~C~~C~~~f~~~~~l~~H 62 (267)
-.|.|+.||.++. +..+..|... =.+-.. .|-.|++.|.. ...+.|
T Consensus 9 V~F~C~~Cgd~lK-K~kv~~H~~~--Cr~~~~~SCIDC~~~F~~-~~y~~H 55 (79)
T 1wjv_A 9 VFFTCNACGESVK-KIQVEKHVSN--CRNCECLSCIDCGKDFWG-DDYKSH 55 (79)
T ss_dssp CEEEESSSCCEEE-TTHHHHHHHH--CTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred eEEEcCCCCCeee-cccchhHHhh--CCCCCcEEecccCCeeCC-CCEeCE
Confidence 3577888887665 3457777654 333223 67777777764 335555
No 426
>3k59_A POL II, DNA polymerase II; protein-DNA complex, DNA damage, DNA repair, DNA-binding; HET: DNA DOC DCP; 1.92A {Escherichia coli} PDB: 3k57_A* 3k58_A* 3k5l_A* 3k5m_A* 3k5n_A* 3k5o_A* 3maq_A* 1q8i_A*
Probab=72.09 E-value=5.7 Score=37.71 Aligned_cols=40 Identities=15% Similarity=0.312 Sum_probs=29.8
Q ss_pred hhccCCCHHHHHHHHHHHHhcCCCCCcccccCCCceEEEeccc-hhhhcccc
Q 024455 194 DIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR 244 (267)
Q Consensus 194 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~Dl~~l~ 244 (267)
.+..-++-.+++..+.+++.. .+| .||||||+ .|||.+|.
T Consensus 197 ~V~~f~~E~~lL~~f~~~i~~------~dP-----Dii~g~N~~~FD~pyL~ 237 (786)
T 3k59_A 197 ELEYVASRPQLLEKLNAWFAN------YDP-----DVIIGWNVVQFDLRMLQ 237 (786)
T ss_dssp EEEEESSHHHHHHHHHHHHHH------HCC-----SEEEESSTTTTHHHHHH
T ss_pred eEEEeCCHHHHHHHHHHHHHH------cCC-----CEEEecCCccCcHHHHH
Confidence 344456888999999999942 222 29999998 58999993
No 427
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=70.62 E-value=2 Score=27.54 Aligned_cols=26 Identities=12% Similarity=0.137 Sum_probs=15.4
Q ss_pred CCCCCCcCCcc-ccc-----ccccccccccCC
Q 024455 65 GPLSKAHCSGI-FSD-----RGCNLCMNIFDS 90 (267)
Q Consensus 65 ~~~~C~~C~k~-f~~-----~~C~~C~~~F~~ 90 (267)
..|.|+.|++. +.. +.|..|++.|.-
T Consensus 26 ~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AG 57 (73)
T 1ffk_W 26 KKYKCPVCGFPKLKRASTSIWVCGHCGYKIAG 57 (73)
T ss_pred cCccCCCCCCceeEEEEeEEEECCCCCcEEEC
Confidence 45667777763 222 237777777754
No 428
>2gv9_A DNA polymerase; polymerase alpha fold, transferase; HET: DNA; 2.68A {Human herpesvirus 1} PDB: 1dml_B*
Probab=70.20 E-value=4.4 Score=40.35 Aligned_cols=39 Identities=10% Similarity=0.075 Sum_probs=30.0
Q ss_pred hccCCCHHHHHHHHHHHHhcCCCCCcccccCCCceEEEeccc-hhhhcccc
Q 024455 195 IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR 244 (267)
Q Consensus 195 l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~Dl~~l~ 244 (267)
+..-.+-.+++..++++|.. .+| .||||||+ .|||.+|.
T Consensus 395 V~~~~sE~eLL~~F~~~I~~------~DP-----DIIvGyNi~~FDlpyL~ 434 (1193)
T 2gv9_A 395 VLEFDSEFEMLLAFMTLVKQ------YGP-----EFVTGYNIINFDWPFLL 434 (1193)
T ss_dssp EEEESSHHHHHHHHHHHHHH------HCC-----SEEEESSTTTTHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHh------cCC-----CEEEEcCCcCccHHHHH
Confidence 44456889999999999942 222 39999998 68999984
No 429
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=70.10 E-value=1 Score=31.62 Aligned_cols=28 Identities=14% Similarity=0.300 Sum_probs=20.4
Q ss_pred CCCCCCCcCCcc-ccc-----ccccccccccCCh
Q 024455 64 TGPLSKAHCSGI-FSD-----RGCNLCMNIFDSP 91 (267)
Q Consensus 64 ~~~~~C~~C~k~-f~~-----~~C~~C~~~F~~~ 91 (267)
...|.|+.||+. +.. +.|..|++.|.--
T Consensus 58 ~akytCPfCGk~~vKR~avGIW~C~~Cgk~fAGG 91 (116)
T 3cc2_Z 58 NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGG 91 (116)
T ss_dssp HSCEECSSSCCEEEEEEETTEEEETTTCCEEECC
T ss_pred ccCCcCCCCCCceeEecCceeEECCCCCCEEECC
Confidence 457889999983 333 2499999998753
No 430
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=69.83 E-value=3.1 Score=21.26 Aligned_cols=22 Identities=27% Similarity=0.333 Sum_probs=19.1
Q ss_pred ccccccCccccCChHHHHHHHh
Q 024455 14 RHKCVACYKQFKRKDHLIEHMK 35 (267)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~ 35 (267)
.|.|+.|.........|+.|..
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHHH
Confidence 5889999999999999998865
No 431
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=69.53 E-value=1.8 Score=25.81 Aligned_cols=19 Identities=26% Similarity=0.520 Sum_probs=15.7
Q ss_pred cccccccccCChhhHHHHH
Q 024455 80 GCNLCMNIFDSPSSLIKHK 98 (267)
Q Consensus 80 ~C~~C~~~F~~~~~L~~H~ 98 (267)
.|..|+..|..+..|+.|+
T Consensus 15 eC~lC~vkYs~r~slqDHI 33 (55)
T 2yrk_A 15 ECTLCGVKYSARLSIRDHI 33 (55)
T ss_dssp CCTTTTCCCCSSSCHHHHH
T ss_pred cccccCcccccccchhhhh
Confidence 3888888888888888886
No 432
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=68.92 E-value=2 Score=28.28 Aligned_cols=27 Identities=15% Similarity=0.261 Sum_probs=17.2
Q ss_pred CCCCCCCcCCccccc------ccccccccccCC
Q 024455 64 TGPLSKAHCSGIFSD------RGCNLCMNIFDS 90 (267)
Q Consensus 64 ~~~~~C~~C~k~f~~------~~C~~C~~~F~~ 90 (267)
...|.|+.||+.-.. +.|..|++.|.-
T Consensus 33 ~~ky~CpfCGk~~vkR~a~GIW~C~kCg~~~AG 65 (83)
T 3j21_i 33 RQKHTCPVCGRKAVKRISTGIWQCQKCGATFAG 65 (83)
T ss_dssp HSCBCCSSSCSSCEEEEETTEEEETTTCCEEEC
T ss_pred hcccCCCCCCCceeEecCcCeEEcCCCCCEEeC
Confidence 346778888776322 138888877754
No 433
>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}
Probab=68.15 E-value=4.6 Score=24.03 Aligned_cols=44 Identities=18% Similarity=0.352 Sum_probs=25.4
Q ss_pred cccccCccccCChHHHHHHHhHhcCCCCCCCcccch-hhcCCHHHHHhh
Q 024455 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQ-KLSKSFESLREH 62 (267)
Q Consensus 15 ~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~~C~~C~-~~f~~~~~l~~H 62 (267)
-.|++|...-.+...|..|... -... +|++|- -.-.+.+.|+.|
T Consensus 4 mvC~~C~~ECET~kEl~~H~~s--Cp~g--qCPYC~~~~e~tesAlQaH 48 (57)
T 2k9h_A 4 MVCDVCHHECETAKELESHRQS--CING--QCPYCMTITEATESALQAH 48 (57)
T ss_dssp TBCTTTCCBCSSTTTHHHHHHH--HTTT--BCTTTCCBCCSSHHHHHHH
T ss_pred chhhHHHhhhhhHHHHHHHhcc--CCCC--CCCcccCcCCcCHHHHHHH
Confidence 3577777766777777777766 2211 566652 233445666665
No 434
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=66.59 E-value=1.7 Score=27.65 Aligned_cols=21 Identities=29% Similarity=0.415 Sum_probs=11.0
Q ss_pred CCCCCcCCcccccc-----ccccccc
Q 024455 66 PLSKAHCSGIFSDR-----GCNLCMN 86 (267)
Q Consensus 66 ~~~C~~C~k~f~~~-----~C~~C~~ 86 (267)
.|.|..||..|... .|+.||.
T Consensus 28 ~Y~C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 28 KYICAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CEECSSSCCEECCCTTSTTCCSSSCC
T ss_pred EEECCCCCCcceeCCCCCccCCCCCc
Confidence 34555555554432 2666665
No 435
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=66.04 E-value=1.8 Score=32.85 Aligned_cols=25 Identities=28% Similarity=0.568 Sum_probs=21.1
Q ss_pred ccccccCccccCChHHHHHHHhHhcCCC
Q 024455 14 RHKCVACYKQFKRKDHLIEHMKISYHSV 41 (267)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~H~~ 41 (267)
-|+|..||| +..-.+|.+|++. |-.
T Consensus 154 FYKCe~CgK-YvDId~~~~Hlk~--Hg~ 178 (226)
T 2czr_A 154 FYKCEECGK-YVDIENLEAHLRE--HGI 178 (226)
T ss_dssp EEECTTTCC-EEEGGGHHHHHHT--TTC
T ss_pred EEehhhcCc-eecHHHHHHHHHH--cCc
Confidence 489999998 6778899999998 754
No 436
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=65.65 E-value=2.7 Score=28.16 Aligned_cols=27 Identities=11% Similarity=0.282 Sum_probs=16.6
Q ss_pred CCCCCCCcCCccccc------ccccccccccCC
Q 024455 64 TGPLSKAHCSGIFSD------RGCNLCMNIFDS 90 (267)
Q Consensus 64 ~~~~~C~~C~k~f~~------~~C~~C~~~F~~ 90 (267)
...|.|+.||+.-.. +.|..|++.|.-
T Consensus 34 ~~ky~CpfCgk~~vkR~a~GIW~C~~C~~~~AG 66 (92)
T 3izc_m 34 HARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAG 66 (92)
T ss_dssp HSCCCCSSSCSSCCEEEETTEEECTTTCCEEEC
T ss_pred hcCCcCCCCCCceeeecccceEEcCCCCCEEeC
Confidence 346777777765322 137778777754
No 437
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=65.47 E-value=2.6 Score=28.24 Aligned_cols=26 Identities=19% Similarity=0.404 Sum_probs=15.9
Q ss_pred CCCCCCcCCcccccc------cccccccccCC
Q 024455 65 GPLSKAHCSGIFSDR------GCNLCMNIFDS 90 (267)
Q Consensus 65 ~~~~C~~C~k~f~~~------~C~~C~~~F~~ 90 (267)
..|.|+.||+.-... .|..|++.|.-
T Consensus 35 ~ky~CpfCgk~~vkR~a~GIW~C~~Cg~~~AG 66 (92)
T 3iz5_m 35 SKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAG 66 (92)
T ss_dssp SCBCCTTTCSSCBEEEETTEEECSSSCCEEEC
T ss_pred ccccCcccCCCeeEecCcceEEcCCCCCEEeC
Confidence 466777777653221 37777777654
No 438
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=64.80 E-value=1.7 Score=32.67 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=17.8
Q ss_pred CCCCCcCCccccc----cccccccccc
Q 024455 66 PLSKAHCSGIFSD----RGCNLCMNIF 88 (267)
Q Consensus 66 ~~~C~~C~k~f~~----~~C~~C~~~F 88 (267)
.|.|..||+.|.. ..|+.||...
T Consensus 132 ~y~C~~Cg~~~~~~~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 132 RYVCIGCGRKFSTLPPGGVCPDCGSKV 158 (165)
T ss_dssp CEEESSSCCEESSCCGGGBCTTTCCBE
T ss_pred EEECCCCCCcccCCCCCCcCCCCCCcc
Confidence 5779999999973 2599999753
No 439
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=64.08 E-value=6.1 Score=25.04 Aligned_cols=18 Identities=28% Similarity=0.355 Sum_probs=7.9
Q ss_pred CcccchhhcCCHHHHHhhc
Q 024455 45 KCAVCQKLSKSFESLREHL 63 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~ 63 (267)
.|..|+..|. ...|..|.
T Consensus 46 ~C~~C~~~~~-~~~l~~H~ 63 (76)
T 2yuc_A 46 KCEFCGCDFS-GEAYESHE 63 (76)
T ss_dssp CCSSSCCCCC-HHHHHHTT
T ss_pred ECCCCCCccC-HHHHHHHH
Confidence 4555544443 23344443
No 440
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=63.69 E-value=2.3 Score=23.64 Aligned_cols=25 Identities=20% Similarity=0.287 Sum_probs=19.3
Q ss_pred CCCccccccCccccCChHHHHHHHhH
Q 024455 11 STARHKCVACYKQFKRKDHLIEHMKI 36 (267)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (267)
....|.|+.|++.+.. ..+..|.--
T Consensus 6 ~~~~~~C~~C~~~i~~-~~~~EH~D~ 30 (39)
T 2i5o_A 6 AEDQVPCEKCGSLVPV-WDMPEHMDY 30 (39)
T ss_dssp CCCEEECTTTCCEEEG-GGHHHHHHH
T ss_pred cCCCcccccccCcCCc-ccccchhhH
Confidence 4557899999999887 456778765
No 441
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=63.06 E-value=4 Score=26.15 Aligned_cols=24 Identities=29% Similarity=0.502 Sum_probs=17.1
Q ss_pred ccccccccC---ChhhHHHHHHHhcCC
Q 024455 81 CNLCMNIFD---SPSSLIKHKEACSLS 104 (267)
Q Consensus 81 C~~C~~~F~---~~~~L~~H~~~h~~~ 104 (267)
|..|++.+. ..++|.+|++.+|.+
T Consensus 32 Ck~C~~~l~~~g~TSnL~rHL~~~H~~ 58 (73)
T 2ct5_A 32 CRICMAQIAYSGNTSNLSYHLEKNHPE 58 (73)
T ss_dssp ETTTTEECCCCSSTHHHHHHHHHSCHH
T ss_pred CCCCCccccCCCChHhHHHHHHHHCHH
Confidence 666666543 467899999888754
No 442
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=62.56 E-value=2.1 Score=24.76 Aligned_cols=10 Identities=30% Similarity=0.571 Sum_probs=5.3
Q ss_pred CcccchhhcC
Q 024455 45 KCAVCQKLSK 54 (267)
Q Consensus 45 ~C~~C~~~f~ 54 (267)
+|..||..+.
T Consensus 6 ~C~vCGyvyd 15 (46)
T 6rxn_A 6 VCNVCGYEYD 15 (46)
T ss_dssp EETTTCCEEC
T ss_pred ECCCCCeEEe
Confidence 4555555543
No 443
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.14 E-value=8.2 Score=23.28 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=29.2
Q ss_pred CCCCcCCcccccccccccccccCChhhHHHHHHHhcCC
Q 024455 67 LSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLS 104 (267)
Q Consensus 67 ~~C~~C~k~f~~~~C~~C~~~F~~~~~L~~H~~~h~~~ 104 (267)
-.|.+|+. .....|+.|+..|=+..-++.|.....+.
T Consensus 13 ~~C~vC~~-~~kY~CPrC~~~yCSl~C~k~Hk~~C~~~ 49 (56)
T 2yqq_A 13 VVCVICLE-KPKYRCPACRVPYCSVVCFRKHKEQCNPE 49 (56)
T ss_dssp CCCTTTCS-CCSEECTTTCCEESSHHHHHHHHHHCCCC
T ss_pred CccCcCcC-CCeeeCCCCCCCeeCHHHHHHHHhhCcCC
Confidence 35888888 66667999999999999999998664443
No 444
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=61.09 E-value=4.1 Score=25.28 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=11.3
Q ss_pred CCCCCcCCcccccc-----cccccccc
Q 024455 66 PLSKAHCSGIFSDR-----GCNLCMNI 87 (267)
Q Consensus 66 ~~~C~~C~k~f~~~-----~C~~C~~~ 87 (267)
.|.|..|+..+... .|+.||..
T Consensus 21 ~Y~C~~Cg~~~~l~~~~~iRC~~CG~R 47 (63)
T 3h0g_L 21 IYLCADCGARNTIQAKEVIRCRECGHR 47 (63)
T ss_dssp CCBCSSSCCBCCCCSSSCCCCSSSCCC
T ss_pred EEECCCCCCeeecCCCCceECCCCCcE
Confidence 35555555555433 26666543
No 445
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=60.45 E-value=4.6 Score=26.80 Aligned_cols=28 Identities=29% Similarity=0.572 Sum_probs=21.1
Q ss_pred CCccccccCccccCChHHHHHHHhHhcCCCCCC
Q 024455 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (267)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~H~~~~~ 44 (267)
+.-..|-+||+.|. .|++|+.+ |.+..|
T Consensus 19 ~d~iiClecGK~fK---~LkRHL~~--~hgltp 46 (87)
T 2jsp_A 19 DDHIVCLECGGSFK---SLKRHLTT--HHSMTP 46 (87)
T ss_dssp SSCEECTBTCCEES---BHHHHHHH--TTCSCH
T ss_pred CCceEecccchhhH---HHHHHHHH--ccCCCH
Confidence 33457999999988 47799998 666544
No 446
>1vk0_A Hypothetical protein; homohexamer, AT5G06450, struc genomics, protein structure initiative, center for eukaryot structural genomics, CESG; 2.10A {Arabidopsis thaliana} SCOP: c.55.3.5 PDB: 2q3s_A
Probab=59.73 E-value=4.1 Score=31.81 Aligned_cols=41 Identities=27% Similarity=0.295 Sum_probs=29.4
Q ss_pred HHHHHHHhcCCCCCcccccCCCceEEEeccchhhhccccccCC--CCceeccccc
Q 024455 206 DKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP--DHMLRDTAKY 258 (267)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~~~~--~~~~~dt~~~ 258 (267)
..|.++|.+ .+.+.|||++.+|+..|.-.+. -..++|+..+
T Consensus 98 ~~L~~lL~d------------~~i~Kvg~~~~~D~~~L~~~~g~~~~~~~Dl~~l 140 (206)
T 1vk0_A 98 KDLYRFFAS------------KFVTFVGVQIEEDLDLLRENHGLVIRNAINVGKL 140 (206)
T ss_dssp HHHHHHHTC------------SSSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHH
T ss_pred HHHHHHhcC------------CCceEEEeccHHHHHHHHHhcCCCcCCeeeHHHH
Confidence 347788854 5579999999999999964321 2267898644
No 447
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=57.71 E-value=3.1 Score=28.41 Aligned_cols=27 Identities=15% Similarity=0.394 Sum_probs=18.0
Q ss_pred CCCCCCCcCCccccc------ccccccccccCC
Q 024455 64 TGPLSKAHCSGIFSD------RGCNLCMNIFDS 90 (267)
Q Consensus 64 ~~~~~C~~C~k~f~~------~~C~~C~~~F~~ 90 (267)
...|.|+.||+.-.. +.|..|++.|.-
T Consensus 34 ~aky~CpfCgk~~vKR~a~GIW~C~kCg~~~AG 66 (103)
T 4a17_Y 34 HAKYGCPFCGKVAVKRAAVGIWKCKPCKKIIAG 66 (103)
T ss_dssp HSCEECTTTCCEEEEEEETTEEEETTTTEEEEC
T ss_pred hcCCCCCCCCCceeeecCcceEEcCCCCCEEeC
Confidence 346778888776332 238888888764
No 448
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=57.01 E-value=12 Score=26.55 Aligned_cols=32 Identities=19% Similarity=0.454 Sum_probs=26.0
Q ss_pred CCCCCCCCCCccccccCccccCChHHHHHHHhH
Q 024455 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKI 36 (267)
Q Consensus 4 ~~~~~~~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (267)
..||. .++.+..|=.|.++|.+...+..|++.
T Consensus 6 ~~e~~-~e~~~~~CLFCd~~~~s~~~~l~H~k~ 37 (121)
T 1wir_A 6 SGEPA-HGRQHTPCLFCDRLFASAEETFSHCKL 37 (121)
T ss_dssp CCCCC-CCCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred ccCcc-CCCCceeEecCCCcccCHHHHHHHHHH
Confidence 34544 456689999999999999999999988
No 449
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=55.32 E-value=9.1 Score=24.59 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=13.8
Q ss_pred ccccccccCChhhHHHH
Q 024455 81 CNLCMNIFDSPSSLIKH 97 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H 97 (267)
|+.||..+.....+++-
T Consensus 39 C~~CGE~~~~~e~~~~~ 55 (78)
T 3ga8_A 39 CVHCEESIMNKEESDAF 55 (78)
T ss_dssp ETTTCCEECCHHHHHHH
T ss_pred CCCCCCEEECHHHHHHH
Confidence 99999999887776654
No 450
>2py5_A DNA polymerase; protein-DNA complex, replication, transferase/DNA complex; HET: DNA; 1.60A {Bacillus phage PHI29} SCOP: c.55.3.5 e.8.1.1 PDB: 1xhz_A* 1xhx_A* 2ex3_A* 1xi1_A* 2pyj_A* 2pyl_A* 2pzs_A*
Probab=51.20 E-value=5.3 Score=36.44 Aligned_cols=17 Identities=18% Similarity=-0.056 Sum_probs=14.5
Q ss_pred ceEEEeccchhhhcccc
Q 024455 228 ARLLVGHGLEHDLDSLR 244 (267)
Q Consensus 228 ~~~lvgh~~~~Dl~~l~ 244 (267)
+.++++||+.||+.||.
T Consensus 55 ~~~i~~hNl~FD~~~l~ 71 (575)
T 2py5_A 55 QADLYFHNLKFAGAFII 71 (575)
T ss_dssp CCEEEETTHHHHHHHHH
T ss_pred CCEEEEEChhhhHHHHH
Confidence 35788999999999984
No 451
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=50.31 E-value=2.4 Score=28.64 Aligned_cols=36 Identities=19% Similarity=0.473 Sum_probs=24.9
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCccccccc-ccccccc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRG-CNLCMNI 87 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f~~~~-C~~C~~~ 87 (267)
.|+.|+....+. .+.+.|+.|++.|.... |+.|+..
T Consensus 34 ~CP~Cq~eL~~~-------g~~~hC~~C~~~f~~~a~CPdC~q~ 70 (101)
T 2jne_A 34 HCPQCQHVLDQD-------NGHARCRSCGEFIEMKALCPDCHQP 70 (101)
T ss_dssp BCSSSCSBEEEE-------TTEEEETTTCCEEEEEEECTTTCSB
T ss_pred cCccCCCcceec-------CCEEECccccchhhccccCcchhhH
Confidence 788887665431 23455999998888764 8888653
No 452
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=47.66 E-value=9.2 Score=29.78 Aligned_cols=22 Identities=23% Similarity=0.330 Sum_probs=19.0
Q ss_pred cccccccccCC-hhhHHHHHHHh
Q 024455 80 GCNLCMNIFDS-PSSLIKHKEAC 101 (267)
Q Consensus 80 ~C~~C~~~F~~-~~~L~~H~~~h 101 (267)
.|..|+..|.+ -..|+.|+..|
T Consensus 171 ~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 171 KCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp BCTTTCCBCTTCHHHHHHHHHHH
T ss_pred eeCCCCchhhcccHHHHHHHHHH
Confidence 39999999987 88999998877
No 453
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=47.56 E-value=1.9 Score=28.21 Aligned_cols=22 Identities=23% Similarity=0.380 Sum_probs=14.2
Q ss_pred CCCCCcCCccccccc-ccccccc
Q 024455 66 PLSKAHCSGIFSDRG-CNLCMNI 87 (267)
Q Consensus 66 ~~~C~~C~k~f~~~~-C~~C~~~ 87 (267)
.+.|..|++.|.... |+.||..
T Consensus 18 ~~~C~~C~~~~~~~afCPeCgq~ 40 (81)
T 2jrp_A 18 TAHCETCAKDFSLQALCPDCRQP 40 (81)
T ss_dssp EEECTTTCCEEEEEEECSSSCSC
T ss_pred ceECccccccCCCcccCcchhhH
Confidence 345777777776554 7777653
No 454
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=47.54 E-value=7.2 Score=24.78 Aligned_cols=25 Identities=24% Similarity=0.604 Sum_probs=13.7
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCccc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (267)
.|..|++.|... .+.+.|..||+.|
T Consensus 13 ~C~~C~~~F~~~-------~RrHHCR~CG~v~ 37 (73)
T 1vfy_A 13 ACMICSKKFSLL-------NRKHHCRSCGGVF 37 (73)
T ss_dssp BCTTTCCBCBTT-------BCCEECTTTCCEE
T ss_pred cccCCCCccCCc-------cccccCCCCCEEE
Confidence 566666666421 3344566666554
No 455
>3pv8_A DNA polymerase I; DNA polymerase I, protein-DNA complex, thymine-adenine, CLOS conformation; HET: DNA 2DT D3T; 1.52A {Geobacillus kaustophilus} PDB: 3px0_A* 3px4_A* 3px6_A* 3thv_A* 3ti0_A* 4dse_A* 4dsf_A* 4ds4_A* 4dqp_A* 4dqi_A* 4ds5_A* 4e0d_A* 4dqr_A* 4dqq_A* 3tan_A* 3tap_A* 3taq_A* 3tar_A* 4dqs_A* 3hp6_A* ...
Probab=47.37 E-value=6.3 Score=36.10 Aligned_cols=41 Identities=7% Similarity=0.028 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCCCCcccccCCCceEEEeccchhhhcccc---ccCCCCceecccc
Q 024455 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR---MNYPDHMLRDTAK 257 (267)
Q Consensus 204 v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~---~~~~~~~~~dt~~ 257 (267)
+.+.|.+++.+ .+...||||+.+|+.+|. +..+ ..+.||.+
T Consensus 69 ~l~~Lk~lLed------------~~i~KV~hn~K~Dl~vL~~~Gi~l~-g~~fDTmL 112 (592)
T 3pv8_A 69 ADPQFVAWLGD------------ETKKKSMFDSKRAAVALKWKGIELC-GVSFDLLL 112 (592)
T ss_dssp TCHHHHHHHTC------------TTSEEEESSHHHHHHHHHHTTCCCC-CEEEEHHH
T ss_pred HHHHHHHHHhC------------CCCeEEEechHHHHHHHHHcCCCCC-CccchHHH
Confidence 44678888854 456899999999999994 3322 24678873
No 456
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=47.18 E-value=5.1 Score=24.01 Aligned_cols=10 Identities=30% Similarity=0.846 Sum_probs=5.5
Q ss_pred CcccchhhcC
Q 024455 45 KCAVCQKLSK 54 (267)
Q Consensus 45 ~C~~C~~~f~ 54 (267)
+|..||..+.
T Consensus 5 ~C~vCGyvYd 14 (54)
T 4rxn_A 5 TCTVCGYIYD 14 (54)
T ss_dssp EETTTCCEEC
T ss_pred ECCCCCeEEC
Confidence 4566665553
No 457
>1yt3_A Ribonuclease D, RNAse D; exoribonuclease, exonuclease, hydrolase, tRNA processing, hydrolase,translation; 1.60A {Escherichia coli} SCOP: a.60.8.3 a.60.8.3 c.55.3.5
Probab=46.37 E-value=11 Score=32.12 Aligned_cols=40 Identities=23% Similarity=0.212 Sum_probs=28.8
Q ss_pred HHHHHHHhcCCCCCcccccCCCceEEEeccchhhhccccc--c-CCCCceeccccc
Q 024455 206 DKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM--N-YPDHMLRDTAKY 258 (267)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~--~-~~~~~~~dt~~~ 258 (267)
+.|.+++.+ .+.+.||||+.+|+.+|.- . .+. .++||.+.
T Consensus 64 ~~L~~ll~d------------~~i~Kv~h~~k~Dl~~L~~~~Gi~~~-~~fDt~lA 106 (375)
T 1yt3_A 64 SPLKAILRD------------PSITKFLHAGSEDLEVFLNVFGELPQ-PLIDTQIL 106 (375)
T ss_dssp HHHHHHHHC------------TTSEEEESSCHHHHHHHHHHHSSCCS-SEEEHHHH
T ss_pred HHHHHHHcC------------CCceEEEeeHHHHHHHHHHHcCCCCC-cEEEcHHH
Confidence 457778854 4568899999999999952 2 233 67898743
No 458
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=44.42 E-value=5.7 Score=25.28 Aligned_cols=19 Identities=21% Similarity=0.536 Sum_probs=10.9
Q ss_pred CCcCCcccccc------cccccccccC
Q 024455 69 KAHCSGIFSDR------GCNLCMNIFD 89 (267)
Q Consensus 69 C~~C~k~f~~~------~C~~C~~~F~ 89 (267)
|+ |+..+... .|+ ||+.+.
T Consensus 7 C~-C~~~~~~~~~~kT~~C~-CG~~~~ 31 (71)
T 1gh9_A 7 CD-CGRALYSREGAKTRKCV-CGRTVN 31 (71)
T ss_dssp ET-TSCCEEEETTCSEEEET-TTEEEE
T ss_pred CC-CCCEEEEcCCCcEEECC-CCCeee
Confidence 66 66655433 377 776553
No 459
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=43.20 E-value=14 Score=21.27 Aligned_cols=10 Identities=20% Similarity=0.757 Sum_probs=6.4
Q ss_pred ccccccccCC
Q 024455 81 CNLCMNIFDS 90 (267)
Q Consensus 81 C~~C~~~F~~ 90 (267)
|..||..|..
T Consensus 27 C~~CG~v~~e 36 (50)
T 1pft_A 27 CAKCGYVIEE 36 (50)
T ss_dssp ESSSCCBCCC
T ss_pred CcccCCcccc
Confidence 7777766653
No 460
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=43.08 E-value=8.5 Score=22.77 Aligned_cols=9 Identities=33% Similarity=0.648 Sum_probs=5.0
Q ss_pred Ccccchhhc
Q 024455 45 KCAVCQKLS 53 (267)
Q Consensus 45 ~C~~C~~~f 53 (267)
+|..||..+
T Consensus 5 ~C~~CGyvY 13 (52)
T 1e8j_A 5 VCTVCGYEY 13 (52)
T ss_dssp ECSSSCCCC
T ss_pred EeCCCCeEE
Confidence 555665544
No 461
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=42.22 E-value=9.7 Score=24.80 Aligned_cols=25 Identities=24% Similarity=0.433 Sum_probs=16.0
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCccc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (267)
.|..|++.|.. ..+.+.|..||+.|
T Consensus 21 ~C~~C~~~Fs~-------~~RrHHCR~CG~v~ 45 (82)
T 2yw8_A 21 HCRQCEKEFSI-------SRRKHHCRNCGHIF 45 (82)
T ss_dssp BCTTTCCBCBT-------TBCCEECTTTCCEE
T ss_pred cccCcCCcccC-------ccccccCCCCCCEE
Confidence 67778877752 13445677777665
No 462
>2e6m_A Werner syndrome ATP-dependent helicase homolog; APO form, hydrolase; 2.00A {Mus musculus} PDB: 2e6l_A 2fby_A 2fbv_A 2fbx_A 2fbt_A 2fc0_A*
Probab=41.78 E-value=13 Score=28.56 Aligned_cols=38 Identities=24% Similarity=0.231 Sum_probs=26.9
Q ss_pred HHHHHHHhcCCCCCcccccCCCceEEEeccchhhhccccc--c-CCCCceec-cc
Q 024455 206 DKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM--N-YPDHMLRD-TA 256 (267)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~--~-~~~~~~~d-t~ 256 (267)
+.|.+++.+ .+.+.||||+.+|+.+|.- . .+. .++| |.
T Consensus 86 ~~L~~lL~d------------~~i~Kv~~~~k~D~~~L~~~~gi~~~-~~fDlt~ 127 (208)
T 2e6m_A 86 QGLKMLLEN------------KSIKKAGVGIEGDQWKLLRDFDVKLE-SFVELTD 127 (208)
T ss_dssp HHHHHHHTC------------TTSEEEESSHHHHHHHHHHHHCCCCC-SEEEHHH
T ss_pred HHHHHHhcC------------CCceEEEEeeHHHHHHHHHHCCCCCC-CEEEHHH
Confidence 457788853 4568899999999999953 2 233 3789 54
No 463
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=41.43 E-value=1.7 Score=40.28 Aligned_cols=31 Identities=23% Similarity=0.453 Sum_probs=16.9
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCccc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (267)
.|+.|.+-|....+-+-| ..|..|+.||=..
T Consensus 69 mC~~C~~EY~dp~dRRfH-Aqp~aCp~CGP~l 99 (657)
T 3ttc_A 69 LCPACDKEYRDPLDRRFH-AQPVACPECGPYL 99 (657)
T ss_dssp CCHHHHHHHHCTTSTTTT-CTTCCCTTTSCCE
T ss_pred CChHHHHHhCCCCCCcCc-CCCCcCcccCccc
Confidence 666666666555553333 4455566665443
No 464
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=41.41 E-value=7.3 Score=27.41 Aligned_cols=10 Identities=40% Similarity=0.793 Sum_probs=4.3
Q ss_pred CCCCcCCccc
Q 024455 67 LSKAHCSGIF 76 (267)
Q Consensus 67 ~~C~~C~k~f 76 (267)
+.|..||..|
T Consensus 74 ~~C~~CG~~~ 83 (119)
T 2kdx_A 74 LECKDCSHVF 83 (119)
T ss_dssp EECSSSSCEE
T ss_pred EEcCCCCCEE
Confidence 3444444443
No 465
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=41.02 E-value=2.2 Score=40.36 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=16.1
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCcc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGI 75 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~ 75 (267)
.|+.|.+-|....+-+-| ..|..|+.||-.
T Consensus 163 mC~~C~~EY~dp~~RRfh-Aqp~aC~~CGP~ 192 (761)
T 3vth_A 163 MCEKCSREYHDPHDRRFH-AQPVACFDCGPS 192 (761)
T ss_dssp CCHHHHHHHTCTTSTTTT-CTTCCCTTTSCC
T ss_pred CCHHHHHHhcCccccccc-CCCCcCCccCCe
Confidence 566666666555554444 345556655543
No 466
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=37.67 E-value=11 Score=26.71 Aligned_cols=25 Identities=24% Similarity=0.442 Sum_probs=13.0
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCccc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (267)
.|..|++.|.. ..+.+.|..||+.|
T Consensus 71 ~C~~C~~~Fs~-------~~RrHHCR~CG~vf 95 (125)
T 1joc_A 71 NCMACGKGFSV-------TVRRHHCRQCGNIF 95 (125)
T ss_dssp BCTTTCCBCCS-------SSCCEECTTTCCEE
T ss_pred CCcCcCCcccc-------ccccccCCCCCeEE
Confidence 56666666642 12344566665554
No 467
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=37.55 E-value=12 Score=24.48 Aligned_cols=25 Identities=12% Similarity=0.274 Sum_probs=14.8
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCccc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (267)
.|..|++.|... .+.+.|..||+.|
T Consensus 23 ~C~~C~~~Fs~~-------~RrHHCR~CG~v~ 47 (84)
T 1z2q_A 23 ACNGCGCVFTTT-------VRRHHCRNCGYVL 47 (84)
T ss_dssp BCTTTCCBCCTT-------SCCEECTTTCCEE
T ss_pred CCcCcCCccccc-------hhcccccCCCcEE
Confidence 677777777531 3345566666654
No 468
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=37.31 E-value=7.4 Score=25.43 Aligned_cols=6 Identities=33% Similarity=0.794 Sum_probs=3.2
Q ss_pred cccccc
Q 024455 81 CNLCMN 86 (267)
Q Consensus 81 C~~C~~ 86 (267)
|+.||.
T Consensus 63 CPvCga 68 (81)
T 2kn9_A 63 CPDCGA 68 (81)
T ss_dssp CTTTCC
T ss_pred CCCCCC
Confidence 555553
No 469
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=37.14 E-value=2 Score=40.77 Aligned_cols=30 Identities=20% Similarity=0.349 Sum_probs=14.4
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCcc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGI 75 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~ 75 (267)
.|+.|.+-|....+-+-| ..|..|+.||=.
T Consensus 158 mC~~C~~EY~dp~dRRfh-Aqp~aC~~CGP~ 187 (772)
T 4g9i_A 158 MCDFCRSEYEDPLNRRYH-AEPTACPVCGPS 187 (772)
T ss_dssp CCHHHHHHHHCSSSTTTT-CTTCCCTTTSCC
T ss_pred CChhHHHHhCCCCCCCCc-CCCCCCccCCce
Confidence 555555555444443333 334455555543
No 470
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=36.94 E-value=8.9 Score=28.93 Aligned_cols=19 Identities=21% Similarity=0.335 Sum_probs=10.2
Q ss_pred CCCCcCCcccccc---cccccc
Q 024455 67 LSKAHCSGIFSDR---GCNLCM 85 (267)
Q Consensus 67 ~~C~~C~k~f~~~---~C~~C~ 85 (267)
|.|+.||..+... .||.||
T Consensus 139 ~~C~~CG~i~~~~~p~~CP~Cg 160 (170)
T 3pwf_A 139 YICPICGYTAVDEAPEYCPVCG 160 (170)
T ss_dssp EECTTTCCEEESCCCSBCTTTC
T ss_pred eEeCCCCCeeCCCCCCCCCCCC
Confidence 4466666554421 366666
No 471
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.81 E-value=13 Score=24.21 Aligned_cols=25 Identities=20% Similarity=0.441 Sum_probs=15.7
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCccc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (267)
.|..|++.|... .+.+.|..||+.|
T Consensus 16 ~C~~C~~~F~~~-------~RrHHCR~CG~vf 40 (84)
T 1x4u_A 16 NCTGCSATFSVL-------KKRRSCSNCGNSF 40 (84)
T ss_dssp SCSSSCCCCCSS-------SCCEECSSSCCEE
T ss_pred cCcCcCCccccc-------hhhhhhcCCCcEE
Confidence 677777777431 3445677777665
No 472
>4dfk_A DNA polymerase I, thermostable; DNA polymerase, transferase-DNA complex; HET: DNA DOC 0L5; 1.65A {Thermus aquaticus} PDB: 1jxe_A* 3ktq_A* 3lwl_A* 3lwm_A* 3m8s_A* 3m8r_A* 3oju_A* 3rr7_A* 3rr8_A* 3rrg_A* 3ojs_A* 3rtv_A* 3sv3_A* 3sv4_A* 3syz_A* 3sz2_A* 3t3f_A* 4df4_A* 4df8_A* 4dfj_A* ...
Probab=35.73 E-value=3.2 Score=37.59 Aligned_cols=39 Identities=15% Similarity=0.052 Sum_probs=28.4
Q ss_pred HHHHHHHHHhcCCCCCcccccCCCceEEEeccchhhhccccccCCCCceeccccc
Q 024455 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKY 258 (267)
Q Consensus 204 v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~~~~~~~~~dt~~~ 258 (267)
++..|.+++ .+..+||||+.||+.-.++..+ .++||.+.
T Consensus 46 ~l~~l~~~l--------------~d~~kV~hn~K~Dl~~~Gi~~~--~~fDT~la 84 (540)
T 4dfk_A 46 PYKALRDLK--------------EARGLLAKDLSVLALREGLGLP--PGDDPMLL 84 (540)
T ss_dssp HHHHHTTCS--------------SBCSTTHHHHHHHHHHTTCCCC--BCCCHHHH
T ss_pred hHHHHHHHH--------------cCCCEEEeccHHHHHHcCCCCC--cceeHHHH
Confidence 557788888 5578899999999993344433 57798743
No 473
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=35.60 E-value=17 Score=22.17 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=14.2
Q ss_pred CCCcCCcccccccccccccccC
Q 024455 68 SKAHCSGIFSDRGCNLCMNIFD 89 (267)
Q Consensus 68 ~C~~C~k~f~~~~C~~C~~~F~ 89 (267)
.|+.|+.-.....|+.||....
T Consensus 8 ~C~~CgvYTLk~~CP~CG~~T~ 29 (60)
T 2apo_B 8 KCPKCGLYTLKEICPKCGEKTV 29 (60)
T ss_dssp ECTTTCCEESSSBCSSSCSBCB
T ss_pred eCCCCCCEeccccCcCCCCcCC
Confidence 4777765555556888886644
No 474
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=34.93 E-value=8.5 Score=23.07 Aligned_cols=9 Identities=33% Similarity=0.910 Sum_probs=4.6
Q ss_pred Ccccchhhc
Q 024455 45 KCAVCQKLS 53 (267)
Q Consensus 45 ~C~~C~~~f 53 (267)
+|..||..+
T Consensus 5 ~C~~CGyvY 13 (55)
T 2v3b_B 5 QCVVCGFIY 13 (55)
T ss_dssp EETTTCCEE
T ss_pred EeCCCCeEE
Confidence 455555444
No 475
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=34.56 E-value=14 Score=24.41 Aligned_cols=25 Identities=20% Similarity=0.433 Sum_probs=16.2
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCccc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (267)
.|..|++.|... .+.+.|..||+.|
T Consensus 11 ~C~~C~~~F~~~-------~RrHHCR~CG~vf 35 (88)
T 1wfk_A 11 RCYGCAVKFTLF-------KKEYGCKNCGRAF 35 (88)
T ss_dssp BCTTTCCBCCSS-------SCEEECSSSCCEE
T ss_pred CCcCcCCcccCc-------cccccCCCCCCEE
Confidence 688888877631 3345577777665
No 476
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=34.54 E-value=14 Score=26.04 Aligned_cols=25 Identities=16% Similarity=0.320 Sum_probs=15.3
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCccc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (267)
.|..|+..|... .+.+.|..||+.|
T Consensus 21 ~C~~C~~~Fs~~-------~RkHHCR~CG~if 45 (120)
T 1y02_A 21 SCKSCGAHFANT-------ARKQTCLDCKKNF 45 (120)
T ss_dssp CCTTTCCCCSSG-------GGCEECTTTCCEE
T ss_pred cccCcCCccccc-------cccccCCCCCCee
Confidence 677777777531 2234577777665
No 477
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=33.68 E-value=8.7 Score=29.53 Aligned_cols=21 Identities=14% Similarity=0.396 Sum_probs=13.2
Q ss_pred CCCCCcCCccccc----cccccccc
Q 024455 66 PLSKAHCSGIFSD----RGCNLCMN 86 (267)
Q Consensus 66 ~~~C~~C~k~f~~----~~C~~C~~ 86 (267)
.|.|..||..+.- ..||.||.
T Consensus 155 ~~~C~~CG~~~~g~~~p~~CP~C~~ 179 (191)
T 1lko_A 155 KWRCRNCGYVHEGTGAPELCPACAH 179 (191)
T ss_dssp EEEETTTCCEEEEEECCSBCTTTCC
T ss_pred eEEECCCCCEeeCCCCCCCCCCCcC
Confidence 3567777777642 14777764
No 478
>2hbj_A Exosome complex exonuclease RRP6; RNA metabolism, RNA surveillance, RNA processing, hydrolase, gene regulation; 2.10A {Saccharomyces cerevisiae} SCOP: a.60.8.4 c.55.3.5 PDB: 2hbk_A 2hbl_A* 2hbm_A*
Probab=32.51 E-value=22 Score=30.86 Aligned_cols=40 Identities=28% Similarity=0.183 Sum_probs=28.2
Q ss_pred HHHHHHHhcCCCCCcccccCCCceEEEeccchhhhccccc--c-CCCCceeccccc
Q 024455 206 DKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM--N-YPDHMLRDTAKY 258 (267)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~Dl~~l~~--~-~~~~~~~dt~~~ 258 (267)
..|.+++.+ .+.+.||||+.+|+.+|.- . .+. .++||.+.
T Consensus 149 ~~L~~lL~d------------~~i~KV~h~~k~Dl~~L~~~~Gi~~~-~~fDt~lA 191 (410)
T 2hbj_A 149 HILNEVFTN------------PSIVKVFHGAFMDIIWLQRDLGLYVV-GLFDTYHA 191 (410)
T ss_dssp GGGHHHHTC------------TTSEEEESSCHHHHHHHHHHHCCCCS-SEEEHHHH
T ss_pred HHHHHHHcC------------CCceEEEEehHHHHHHHHHHcCCCcC-CEEEcHHH
Confidence 346777853 4568899999999999943 2 233 38899754
No 479
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=32.51 E-value=10 Score=27.48 Aligned_cols=8 Identities=38% Similarity=0.800 Sum_probs=3.0
Q ss_pred Ccccchhh
Q 024455 45 KCAVCQKL 52 (267)
Q Consensus 45 ~C~~C~~~ 52 (267)
.|..||+.
T Consensus 72 ~C~~CG~~ 79 (139)
T 3a43_A 72 KCRNCNYE 79 (139)
T ss_dssp EETTTCCE
T ss_pred ECCCCCCE
Confidence 33333333
No 480
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=32.30 E-value=16 Score=24.20 Aligned_cols=25 Identities=20% Similarity=0.345 Sum_probs=15.2
Q ss_pred CcccchhhcCCHHHHHhhcCCCCCCCcCCccc
Q 024455 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (267)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~C~~C~k~f 76 (267)
.|..|++.|.. ..+.+.|..||+.|
T Consensus 22 ~C~~C~~~F~~-------~~RrhhCr~CG~v~ 46 (90)
T 3t7l_A 22 NCMNCQVKFTF-------TKRRHHCRACGKVF 46 (90)
T ss_dssp BCTTTCCBCCS-------SSCCEECTTTCCEE
T ss_pred cCcCCCCcccc-------hhhCccccCCCCEE
Confidence 57777777752 13345577776655
No 481
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=31.86 E-value=16 Score=28.41 Aligned_cols=19 Identities=37% Similarity=0.686 Sum_probs=14.3
Q ss_pred CcccchhhcCC-HHHHHhhc
Q 024455 45 KCAVCQKLSKS-FESLREHL 63 (267)
Q Consensus 45 ~C~~C~~~f~~-~~~l~~H~ 63 (267)
+|..|++.|.+ -..|+.|.
T Consensus 171 ~C~~C~~~f~n~~~~LK~HL 190 (204)
T 3sp4_A 171 KCWRCGETFGRHFTKLKAHL 190 (204)
T ss_dssp BCTTTCCBCTTCHHHHHHHH
T ss_pred eeCCCCchhhcccHHHHHHH
Confidence 77778877766 67777776
No 482
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=30.71 E-value=13 Score=23.54 Aligned_cols=10 Identities=20% Similarity=0.776 Sum_probs=5.6
Q ss_pred CcccchhhcC
Q 024455 45 KCAVCQKLSK 54 (267)
Q Consensus 45 ~C~~C~~~f~ 54 (267)
+|..||..+.
T Consensus 9 ~C~vCGyiYd 18 (70)
T 1dx8_A 9 ECEACGYIYE 18 (70)
T ss_dssp EETTTCCEEC
T ss_pred EeCCCCEEEc
Confidence 5666665543
No 483
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=30.68 E-value=50 Score=22.40 Aligned_cols=24 Identities=17% Similarity=0.474 Sum_probs=14.9
Q ss_pred Cccccc---cCccccCChHHHHHHHhH
Q 024455 13 ARHKCV---ACYKQFKRKDHLIEHMKI 36 (267)
Q Consensus 13 k~~~C~---~C~k~f~~~~~l~~H~~~ 36 (267)
..|-|+ .|.++|-+..+|+.|...
T Consensus 57 ~if~C~~~~~CkrtyLs~rdlqaHI~~ 83 (101)
T 3vk6_A 57 SLFMCSIVQGCKRTYLSQRDLQAHINH 83 (101)
T ss_dssp GCCCCCCCCCCCCCCSSHHHHHHHHHH
T ss_pred CEEECCCCCCHHHHhcCHHHHHHHHHH
Confidence 345564 566666666666666654
No 484
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=30.37 E-value=11 Score=25.05 Aligned_cols=9 Identities=22% Similarity=0.763 Sum_probs=5.0
Q ss_pred Ccccchhhc
Q 024455 45 KCAVCQKLS 53 (267)
Q Consensus 45 ~C~~C~~~f 53 (267)
+|..||..+
T Consensus 37 ~C~vCGyvY 45 (87)
T 1s24_A 37 ICITCGHIY 45 (87)
T ss_dssp EETTTTEEE
T ss_pred ECCCCCeEe
Confidence 555565544
No 485
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=29.00 E-value=40 Score=23.59 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=12.7
Q ss_pred ccccccccCChhhHHHH
Q 024455 81 CNLCMNIFDSPSSLIKH 97 (267)
Q Consensus 81 C~~C~~~F~~~~~L~~H 97 (267)
|+.||..+........-
T Consensus 39 C~~CGE~~~d~e~~~~~ 55 (133)
T 3o9x_A 39 CVHCEESIMNKEESDAF 55 (133)
T ss_dssp ESSSSCEECCHHHHHHH
T ss_pred CCCCCCEeecHHHHHHH
Confidence 99999998887655443
No 486
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=28.57 E-value=56 Score=25.64 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=21.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCcccccCCCceEEEeccch
Q 024455 198 AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLE 237 (267)
Q Consensus 198 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~ 237 (267)
..++++..+.|.++++.-. .....+||||+..
T Consensus 52 ~~~~~~~a~dl~~~l~~l~--------~~~~~~lvGhSmG 83 (273)
T 1xkl_A 52 LRTLYDYTLPLMELMESLS--------ADEKVILVGHSLG 83 (273)
T ss_dssp CCSHHHHHHHHHHHHHTSC--------SSSCEEEEEETTH
T ss_pred ccCHHHHHHHHHHHHHHhc--------cCCCEEEEecCHH
Confidence 3578888888888884210 0135799999964
No 487
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=27.98 E-value=47 Score=25.78 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=21.3
Q ss_pred CCHHHHHHHHHHHHhcCCCCCcccccCCCceEEEeccch
Q 024455 199 MPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLE 237 (267)
Q Consensus 199 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~ 237 (267)
.++++..+.|.++|+.-. .....+||||+..
T Consensus 52 ~~~~~~a~dl~~~l~~l~--------~~~~~~lvGhSmG 82 (257)
T 3c6x_A 52 GSFDEYSEPLLTFLEALP--------PGEKVILVGESCG 82 (257)
T ss_dssp CSHHHHTHHHHHHHHTSC--------TTCCEEEEEEETH
T ss_pred cCHHHHHHHHHHHHHhcc--------ccCCeEEEEECcc
Confidence 578888888888884210 0135799999854
No 488
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=27.81 E-value=31 Score=20.96 Aligned_cols=30 Identities=17% Similarity=0.255 Sum_probs=19.9
Q ss_pred CCCcCCc---ccccccccccccccCChhhHHHH
Q 024455 68 SKAHCSG---IFSDRGCNLCMNIFDSPSSLIKH 97 (267)
Q Consensus 68 ~C~~C~k---~f~~~~C~~C~~~F~~~~~L~~H 97 (267)
.|.+|+. ......|+.|+..|=+..-.+.|
T Consensus 13 ~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k~H 45 (59)
T 1x4s_A 13 PCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTH 45 (59)
T ss_dssp EECSSCTTCCEEECEECTTTCCEESSHHHHHHH
T ss_pred cCcCCCCCcCCCccccCcCCCCCccChHHHHHH
Confidence 4677764 34445688888777777666665
No 489
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=27.68 E-value=16 Score=23.71 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=10.6
Q ss_pred CCccccccCccccC
Q 024455 12 TARHKCVACYKQFK 25 (267)
Q Consensus 12 ~k~~~C~~C~k~f~ 25 (267)
.++.+|+.||..|.
T Consensus 54 g~~~RC~eCG~~fk 67 (80)
T 2odx_A 54 NEVARCWECGSVYK 67 (80)
T ss_dssp TCEEECSSSCCEEE
T ss_pred CCCeECCCCCeEEE
Confidence 36788888887765
No 490
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=27.47 E-value=31 Score=24.30 Aligned_cols=24 Identities=21% Similarity=0.394 Sum_probs=20.7
Q ss_pred cccccccccCChhhHHHHHHHhcC
Q 024455 80 GCNLCMNIFDSPSSLIKHKEACSL 103 (267)
Q Consensus 80 ~C~~C~~~F~~~~~L~~H~~~h~~ 103 (267)
.|-.|.+.|.+...+..|++..|+
T Consensus 17 ~CLFCd~~~~s~~~~l~H~k~~H~ 40 (121)
T 1wir_A 17 PCLFCDRLFASAEETFSHCKLEHQ 40 (121)
T ss_dssp ECSSSCCEESSHHHHHHHHHHSSC
T ss_pred eEecCCCcccCHHHHHHHHHHhcC
Confidence 388899999999999999988765
No 491
>2k2d_A Ring finger and CHY zinc finger domain- containing protein 1; zinc-binding protein, cytoplasm, metal-binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=27.03 E-value=17 Score=23.49 Aligned_cols=8 Identities=0% Similarity=-0.263 Sum_probs=0.0
Q ss_pred cccCcccc
Q 024455 17 CVACYKQF 24 (267)
Q Consensus 17 C~~C~k~f 24 (267)
|+.|.|+.
T Consensus 1 ~~~c~ks~ 8 (79)
T 2k2d_A 1 GSHMMHSA 8 (79)
T ss_dssp --------
T ss_pred CCcccccH
Confidence 44455543
No 492
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=26.65 E-value=58 Score=25.33 Aligned_cols=42 Identities=12% Similarity=0.410 Sum_probs=24.8
Q ss_pred ccCCHHhhccCCCHHHHHHHHHHHHhcCCCCCcccccCCCceEEEeccch
Q 024455 188 TGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLE 237 (267)
Q Consensus 188 ~GIt~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~ 237 (267)
+|-+........++++..+.|.++++.-. .....+||||+..
T Consensus 48 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~--------~~~~~~lvGhSmG 89 (264)
T 2wfl_A 48 AGINPRRLDEIHTFRDYSEPLMEVMASIP--------PDEKVVLLGHSFG 89 (264)
T ss_dssp STTCSCCGGGCCSHHHHHHHHHHHHHHSC--------TTCCEEEEEETTH
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHhC--------CCCCeEEEEeChH
Confidence 45443222223478888888888884210 0135799999964
No 493
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=26.37 E-value=8.6 Score=23.45 Aligned_cols=33 Identities=24% Similarity=0.532 Sum_probs=15.8
Q ss_pred CCcCCcccccc---cccccccccCChhhHHHHHHHh
Q 024455 69 KAHCSGIFSDR---GCNLCMNIFDSPSSLIKHKEAC 101 (267)
Q Consensus 69 C~~C~k~f~~~---~C~~C~~~F~~~~~L~~H~~~h 101 (267)
|-.|.+.|... .|+.|+..|=..-.+-.|...|
T Consensus 18 C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh 53 (59)
T 1z60_A 18 CYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLH 53 (59)
T ss_dssp ETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSC
T ss_pred ccccCcccCCCccEECCccCcCcccchhHHHHhhcc
Confidence 44444444322 2666666655544444444433
No 494
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=25.76 E-value=23 Score=27.71 Aligned_cols=9 Identities=33% Similarity=0.829 Sum_probs=5.2
Q ss_pred ccccccccC
Q 024455 81 CNLCMNIFD 89 (267)
Q Consensus 81 C~~C~~~F~ 89 (267)
|..|++.|.
T Consensus 164 C~~C~~~F~ 172 (220)
T 1dvp_A 164 CHRCRVEFT 172 (220)
T ss_dssp CTTTCCBCC
T ss_pred cCCCCCccC
Confidence 555655554
No 495
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=24.73 E-value=76 Score=24.11 Aligned_cols=42 Identities=17% Similarity=0.334 Sum_probs=27.0
Q ss_pred ccCCHHhhccCCCHHHHHHHHHHHHhcCCCCCcccccCCCceEEEeccch
Q 024455 188 TGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLE 237 (267)
Q Consensus 188 ~GIt~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~ 237 (267)
+|-+........++++..+.+.+++.... .....+||||+..
T Consensus 50 ~G~S~~~~~~~~~~~~~~~~~~~~l~~l~--------~~~~~~lvGhS~G 91 (267)
T 3sty_A 50 SGINPKQALQIPNFSDYLSPLMEFMASLP--------ANEKIILVGHALG 91 (267)
T ss_dssp STTCSCCGGGCCSHHHHHHHHHHHHHTSC--------TTSCEEEEEETTH
T ss_pred CCCCCCcCCccCCHHHHHHHHHHHHHhcC--------CCCCEEEEEEcHH
Confidence 44443333334688888999999985310 1156799999954
No 496
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=24.49 E-value=26 Score=27.57 Aligned_cols=9 Identities=33% Similarity=0.862 Sum_probs=4.9
Q ss_pred ccccccccC
Q 024455 81 CNLCMNIFD 89 (267)
Q Consensus 81 C~~C~~~F~ 89 (267)
|..|++.|.
T Consensus 167 C~~C~~~F~ 175 (226)
T 3zyq_A 167 CHRCRVQFG 175 (226)
T ss_dssp CTTTCCBCB
T ss_pred CcCcCCCCC
Confidence 555555554
No 497
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=24.26 E-value=20 Score=27.76 Aligned_cols=9 Identities=22% Similarity=0.121 Sum_probs=3.9
Q ss_pred CCCCcCCcc
Q 024455 67 LSKAHCSGI 75 (267)
Q Consensus 67 ~~C~~C~k~ 75 (267)
|.|..||..
T Consensus 172 ~~C~~CG~i 180 (202)
T 1yuz_A 172 HLCPICGYI 180 (202)
T ss_dssp EECSSSCCE
T ss_pred EEECCCCCE
Confidence 334444444
No 498
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=23.90 E-value=30 Score=21.10 Aligned_cols=21 Identities=14% Similarity=0.333 Sum_probs=13.5
Q ss_pred CCCcCCccccccccccccccc
Q 024455 68 SKAHCSGIFSDRGCNLCMNIF 88 (267)
Q Consensus 68 ~C~~C~k~f~~~~C~~C~~~F 88 (267)
.|+.||.-.....|+.||...
T Consensus 7 ~C~~Cg~YTLk~~CP~CG~~t 27 (60)
T 2aus_D 7 KCPKCGRYTLKETCPVCGEKT 27 (60)
T ss_dssp ECTTTCCEESSSBCTTTCSBC
T ss_pred ECCCCCCEEccccCcCCCCcc
Confidence 477777554455688887653
No 499
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.90 E-value=60 Score=21.30 Aligned_cols=36 Identities=8% Similarity=0.184 Sum_probs=26.8
Q ss_pred CCCCCCcCCccccccccc-ccccccCChhhHHHHHHHh
Q 024455 65 GPLSKAHCSGIFSDRGCN-LCMNIFDSPSSLIKHKEAC 101 (267)
Q Consensus 65 ~~~~C~~C~k~f~~~~C~-~C~~~F~~~~~L~~H~~~h 101 (267)
..|.|+.|...|...-.. .||..|- +..+..+...+
T Consensus 6 ~~~~CPI~~~~~~dPV~~~~cGh~f~-r~cI~~~l~~~ 42 (94)
T 2yu4_A 6 SGFTCPITKEEMKKPVKNKVCGHTYE-EDAIVRMIESR 42 (94)
T ss_dssp SCCBCTTTCSBCSSEEEESSSCCEEE-HHHHHHHHHHH
T ss_pred cEeECcCcCchhcCCEEcCCCCCeec-HHHHHHHHHHc
Confidence 357899999999888776 5999997 45566666654
No 500
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=23.67 E-value=11 Score=26.31 Aligned_cols=15 Identities=13% Similarity=0.561 Sum_probs=9.8
Q ss_pred CCccccccCccccCC
Q 024455 12 TARHKCVACYKQFKR 26 (267)
Q Consensus 12 ~k~~~C~~C~k~f~~ 26 (267)
...+.|++|-..|..
T Consensus 5 ~~~~~C~IC~~~~~~ 19 (133)
T 4ap4_A 5 SGTVSCPICMDGYSE 19 (133)
T ss_dssp CCSCBCTTTCCBHHH
T ss_pred CCCCCCcccChhhhC
Confidence 346788888766543
Done!