BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024463
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5HZ00|SPS3_ARATH Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=SPS3 PE=1 SV=1
Length = 422
Score = 357 bits (916), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 181/292 (61%), Positives = 220/292 (75%), Gaps = 27/292 (9%)
Query: 3 VILLMATALNVCTPELSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTR 62
++LLMATALNV PE + + +LR RQ+ IAEITEMIHVASL+HDDVLDDADTR
Sbjct: 131 ILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTR 190
Query: 63 RGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVI--------------------- 101
RG+GSL+ VMGNK+++LAGD L+SRA ALA+LK+TEV+
Sbjct: 191 RGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSS 250
Query: 102 ------MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDI 155
M+ YMQKTY KTA+L+SNSCKAVA L+GQ EVA LAFEYG+NLGLA+QLIDDI
Sbjct: 251 TEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDI 310
Query: 156 LDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGK 215
LDFTGTSASLGK SL+D+R+G+ITAPILFAMEEFPQLR ++ +P NVD+ LEYLGK
Sbjct: 311 LDFTGTSASLGKGSLSDIRHGVITAPILFAMEEFPQLREVVDQVEKDPRNVDIALEYLGK 370
Query: 216 SHGIQRTTELALKHASLAAAAIDSLPETHDVDATNARTALVHITQKIITRNK 267
S GIQR ELA++HA+LAAAAI SLPET + D +R AL+ +T ++ITRNK
Sbjct: 371 SKGIQRARELAMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITRNK 422
>sp|Q653T6|SPS1_ORYSJ Solanesyl-diphosphate synthase 1, mitochondrial OS=Oryza sativa
subsp. japonica GN=SPS1 PE=1 SV=1
Length = 430
Score = 323 bits (829), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/294 (57%), Positives = 214/294 (72%), Gaps = 31/294 (10%)
Query: 3 VILLMATALNVCTPELSPNVLGNTLIL--DLRRRQQCIAEITEMIHVASLIHDDVLDDAD 60
V+LLMA+AL P +G IL LR RQQ IAEITEMIHVASL+HDDVLDDAD
Sbjct: 139 VLLLMASALKF--PLSDSTEVGVLTILANKLRTRQQNIAEITEMIHVASLLHDDVLDDAD 196
Query: 61 TRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVI------------------- 101
TRRG+ SL+ +MGNKL++LAGD L+SRA VALA+L +TEV+
Sbjct: 197 TRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQIS 256
Query: 102 --------MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLID 153
M+ Y+QKTY KTA+L+SNSCKAVA L+G +V+ LA+EYG+NLGLA+QLID
Sbjct: 257 TSREQRRSMDYYLQKTYYKTASLISNSCKAVAILAGHTADVSMLAYEYGRNLGLAFQLID 316
Query: 154 DILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYL 213
D+LDFTGTSASLGK SLTD+R+GIITAP+L+AMEEFPQL ++ DNPANV++ L+YL
Sbjct: 317 DVLDFTGTSASLGKGSLTDIRHGIITAPMLYAMEEFPQLHEVVDRGFDNPANVELALDYL 376
Query: 214 GKSHGIQRTTELALKHASLAAAAIDSLPETHDVDATNARTALVHITQKIITRNK 267
KS GI++T ELA +HA+ A AI++LP++ D D +R AL+ IT+++ITR K
Sbjct: 377 QKSRGIEKTKELAREHANRAIKAIEALPDSDDEDVLTSRRALIDITERVITRTK 430
>sp|Q6CBH3|COQ1_YARLI Probable hexaprenyl pyrophosphate synthase, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COQ1
PE=3 SV=1
Length = 452
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/267 (39%), Positives = 158/267 (59%), Gaps = 39/267 (14%)
Query: 34 RQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALA 93
+Q+ +AEI EMIH ASL+HDDV+D++ TRRG + + GNK+AILAGD L+ RA VA+A
Sbjct: 192 KQRRLAEIVEMIHTASLLHDDVIDNSATRRGSPTGNVAFGNKMAILAGDFLLGRASVAIA 251
Query: 94 SLKHTEVI---------------------------------MECYMQKTYNKTAALVSNS 120
L++ EVI E Y+ KTY KTA+L+S S
Sbjct: 252 RLRNAEVIELLSTTIANLVEGEFMQLKNTIVDNSEIANKATFEYYIHKTYLKTASLMSKS 311
Query: 121 CKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITA 180
C+A A LSG R + ++++GKNLGL +Q++DD+LD++ + LGK + DL+ G+ TA
Sbjct: 312 CRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLDYSEGESHLGKPAGADLKLGLATA 371
Query: 181 PILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSL 240
P+LFA E++P+L I D P +V+ + ++ G+ RT ELA K+ A A +D L
Sbjct: 372 PVLFAWEKYPELGDMIKRKFDGPGDVERARFLVQQADGLSRTRELAQKYCDEAVANLDLL 431
Query: 241 PETHDVDATNARTALVHITQKIITRNK 267
P + +R AL ++T K++ R+K
Sbjct: 432 PYSE------SREALRNLTMKMMNRSK 452
>sp|Q33DR2|DPS1_MOUSE Decaprenyl-diphosphate synthase subunit 1 OS=Mus musculus GN=Pdss1
PE=1 SV=1
Length = 409
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 170/293 (58%), Gaps = 45/293 (15%)
Query: 3 VILLMATALNVCTPELSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTR 62
+++LMA A N+ + +++ Q+ IA + EMIH A+L+HDDV+DDA +R
Sbjct: 134 IVVLMARACNI----------HHNNAREMQASQRSIALVAEMIHTATLVHDDVIDDASSR 183
Query: 63 RGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVI--------------------- 101
RG +++ + G K A+LAGDL++S A VALA + +T V+
Sbjct: 184 RGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLVRGEFLQLGSK 243
Query: 102 ------MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDI 155
Y++KT+ KTA+L++NSCKAV+ L V +A++YGKN+G+A+QLIDD+
Sbjct: 244 ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDV 303
Query: 156 LDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGK 215
LDFT S +GK + DL+ GI T P+LFA ++FP++ A I P +VD +Y+ +
Sbjct: 304 LDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQ 363
Query: 216 SHGIQRTTELALKHASLAAAAIDSL-PETHDVDATNARTALVHITQKIITRNK 267
S G+Q+TT LA ++ A I L P T R AL+ +++ ++TR+K
Sbjct: 364 SDGVQQTTYLAQQYCHKAVREIRKLRPSTE-------RDALIQLSESVLTRDK 409
>sp|Q5T2R2|DPS1_HUMAN Decaprenyl-diphosphate synthase subunit 1 OS=Homo sapiens GN=PDSS1
PE=1 SV=1
Length = 415
Score = 191 bits (485), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 157/260 (60%), Gaps = 33/260 (12%)
Query: 35 QQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALAS 94
Q+ IA I EMIH ASL+HDDV+DDA +RRG +++ + G K A+LAGDL++S A +ALA
Sbjct: 162 QRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALAR 221
Query: 95 LKHTEVI---------------------------MECYMQKTYNKTAALVSNSCKAVAYL 127
+ +T VI Y++KT+ KTA+L++NSCKAV+ L
Sbjct: 222 IGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVL 281
Query: 128 SGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAME 187
V +A++YGKN+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA +
Sbjct: 282 GCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQ 341
Query: 188 EFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPETHDVD 247
+FP++ A I P +VD +Y+ +S G+Q+TT LA ++ A I L + +
Sbjct: 342 QFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPE-- 399
Query: 248 ATNARTALVHITQKIITRNK 267
R AL+ +++ ++TR+K
Sbjct: 400 ----RDALIQLSEIVLTRDK 415
>sp|Q54VJ9|DPS1_DICDI Decaprenyl-diphosphate synthase OS=Dictyostelium discoideum GN=coq1
PE=3 SV=1
Length = 456
Score = 184 bits (468), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 154/256 (60%), Gaps = 33/256 (12%)
Query: 38 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 97
+AEI EMIH ASL+HDDV+D+A TRR + S++ NKLAIL GD L++RA V L+++++
Sbjct: 208 LAEIVEMIHTASLVHDDVIDEASTRRDVISINHSYTNKLAILCGDYLLARASVVLSTIRN 267
Query: 98 TEVIMEC--------------------------YMQKTYNKTAALVSNSCKAVAYLSGQR 131
+V EC Y+QKTY KT +L++NSC++ A LSG
Sbjct: 268 PDV-TECMSTALAELVEGEFMQAKSNGVVSFDNYLQKTYLKTGSLITNSCRSAAILSGAD 326
Query: 132 EEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQ 191
+ ++ E+GKNLGLA+Q++DD+LD+TG++ GKA+ DL G+ TAP+L+A +EFPQ
Sbjct: 327 SNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQ 386
Query: 192 LRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPETHDVDATNA 251
L I +V+ + S GI++T LA+++ + A ++ LP++ +
Sbjct: 387 LEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLAIEYCNRAIQSLLKLPQSE------S 440
Query: 252 RTALVHITQKIITRNK 267
R L+ ++ ++TR K
Sbjct: 441 RDLLITLSHIVVTRTK 456
>sp|Q7S565|COQ1_NEUCR Probable hexaprenyl pyrophosphate synthase, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU02305 PE=3 SV=1
Length = 449
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 155/281 (55%), Gaps = 43/281 (15%)
Query: 21 NVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILA 80
++ +T IL +RR +AEITE+IH ASL+HDDV+D +++RRG S + GNK+A+LA
Sbjct: 178 SIPADTDILPSQRR---LAEITELIHTASLLHDDVIDHSESRRGAPSANLEFGNKMAVLA 234
Query: 81 GDLLISRALVALASLKHTEVI----------------------------------MECYM 106
GD L+ RA VALA L+H EV+ + Y+
Sbjct: 235 GDFLLGRASVALARLRHAEVVELLATVIANLVEGEFMQLKNTARDEKNPKWSEETLTYYL 294
Query: 107 QKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLG 166
QKTY KTA+L+S SC+A A L G A+ YGKNLGLA+QL+DD+LD+T + LG
Sbjct: 295 QKTYLKTASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELG 354
Query: 167 KASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELA 226
K + DL G+ TAP+LFA + P+L + + + E + +S+GI++T LA
Sbjct: 355 KPAGADLELGLATAPLLFAWKTMPELGPLVGRKFEKEGDAARARELVLQSNGIEQTRALA 414
Query: 227 LKHASLAAAAIDSLPETHDVDATNARTALVHITQKIITRNK 267
+A A AI P++ A+ L+ + K + RNK
Sbjct: 415 QDYAEKAIEAISGFPDSE------AKDGLIEMAVKTLKRNK 449
>sp|P72580|PREA_SYNY3 Prenyl transferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=preA PE=3 SV=2
Length = 323
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 141/231 (61%), Gaps = 27/231 (11%)
Query: 30 DLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRAL 89
+L R + +AEITEMIH ASL+HDDV+D+AD RR + +++S+ N++A+LAGD L +++
Sbjct: 65 ELTARHRRLAEITEMIHTASLVHDDVVDEADLRRNVPTVNSLFDNRVAVLAGDFLFAQSS 124
Query: 90 VALASLKHTEVI---------------------------MECYMQKTYNKTAALVSNSCK 122
LA+L + EV+ +E Y++K+Y KTA+L++NS K
Sbjct: 125 WYLANLDNLEVVKLLSEVIRDFAEGEILQSINRFDTDTDLETYLEKSYFKTASLIANSAK 184
Query: 123 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 182
A LS +V +EYGK+LGLA+Q++DDILDFT + LGK + +DL +G ITAP
Sbjct: 185 AAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTSPTEVLGKPAGSDLISGNITAPA 244
Query: 183 LFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLA 233
LFAME++P L I +++ LE + + GI+R+ ELA A LA
Sbjct: 245 LFAMEKYPLLGKLIEREFAQAGDLEQALELVEQGDGIRRSRELAANQAQLA 295
>sp|Q76FS5|SPS2_ARATH Solanesyl diphosphate synthase 2, chloroplastic OS=Arabidopsis
thaliana GN=SPS2 PE=1 SV=1
Length = 417
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 138/233 (59%), Gaps = 27/233 (11%)
Query: 38 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 97
+ EI EMIH ASLIHDDVLD++D RRG ++ + G ++A+LAGD + ++A LA+L++
Sbjct: 167 LGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFMFAQASWYLANLEN 226
Query: 98 TEVI---------------------MEC------YMQKTYNKTAALVSNSCKAVAYLSGQ 130
EVI +C YM K+Y KTA+LV+ S K A S
Sbjct: 227 LEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKV 286
Query: 131 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFP 190
+VA +++GKNLGL++Q++DDILDFT ++ LGK + DL G ITAP++FA+E P
Sbjct: 287 ESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALENEP 346
Query: 191 QLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPET 243
+LR I S P +++ +E + GI++ ELA + A LA ++ LP +
Sbjct: 347 RLREIIESEFCEPGSLEEAIEIVRNRGGIKKAQELAKEKAELALKNLNCLPRS 399
>sp|Q0INZ4|SPS3_ORYSJ Probable solanesyl-diphosphate synthase 3, chloroplastic (Fragment)
OS=Oryza sativa subsp. japonica GN=SPS3 PE=3 SV=1
Length = 372
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 145/244 (59%), Gaps = 27/244 (11%)
Query: 28 ILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISR 87
+L+L Q +AEI EMIH ASLIHDDV+DD+ RRG ++ + G ++A+LAGD + ++
Sbjct: 112 LLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQ 171
Query: 88 ALVALASLKHTEVI---------------------MEC------YMQKTYNKTAALVSNS 120
+ LA+L++ EVI +C Y+ K+Y KTA+L++ S
Sbjct: 172 SSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAAS 231
Query: 121 CKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITA 180
++ A SG + +EYG+NLGL++Q++DDILDFT ++ LGK + +DL G +TA
Sbjct: 232 TRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTA 291
Query: 181 PILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSL 240
P++FA+++ PQLR I+S ++ +E + +S GI+R ELA + +A ++ L
Sbjct: 292 PVIFALQDEPQLREIIDSEFSETNSLATAIELVHRSGGIKRAHELAREKGEIAIQSLQCL 351
Query: 241 PETH 244
P +
Sbjct: 352 PRSE 355
>sp|Q75HZ9|SPS2_ORYSJ Solanesyl-diphosphate synthase 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=SPS2 PE=1 SV=2
Length = 403
Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 146/244 (59%), Gaps = 27/244 (11%)
Query: 28 ILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISR 87
+L+L Q +AEI EMIH ASLIHDDV+DD+ RRG ++ + G ++A+LAGD + ++
Sbjct: 143 LLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQ 202
Query: 88 ALVALASLKHTEVI---------------------MEC------YMQKTYNKTAALVSNS 120
+ LA+L++ EVI +C Y+ K+Y KTA+L+++S
Sbjct: 203 SSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLLASS 262
Query: 121 CKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITA 180
++ A SG + +EYG+NLGL++Q++DDILDFT ++ LGK + +DL G +TA
Sbjct: 263 TRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTA 322
Query: 181 PILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSL 240
P++FA+++ P+LR I+S ++ ++ + +S GI+R ELA + LA + L
Sbjct: 323 PVIFALQDEPKLREIIDSEFSESDSLATAIDLVHRSGGIRRAQELAKEKGDLALQNLQCL 382
Query: 241 PETH 244
P++
Sbjct: 383 PKSQ 386
>sp|O43091|DPS1_SCHPO Decaprenyl-diphosphate synthase subunit 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dps1 PE=1 SV=1
Length = 378
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 170/308 (55%), Gaps = 50/308 (16%)
Query: 3 VILLMATALNVCTPELSPNVLGNTLILDLRRR----------QQCIAEITEMIHVASLIH 52
++LLM+ A ++C + +V+G+ I D R Q +A+ITEMIH+ASL+H
Sbjct: 78 LVLLMSKATSLCH-GIDRSVVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLH 136
Query: 53 DDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVI----------- 101
DDV+D A+ RRG S + GN+ +ILAG+ +++RA A+A L++ +V
Sbjct: 137 DDVIDHANVRRGSPSSNVAFGNRRSILAGNFILARASTAMARLRNPQVTELLATVIADLV 196
Query: 102 ----------------------MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAF 139
+ Y++K++ KTA+L+S SCKA L VAT A
Sbjct: 197 RGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAG 256
Query: 140 EYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSS 199
EYG+ +G A+QL+DD+LD+T +LGKA+ DL+ G+ TAP+LFA +++P+L A I +
Sbjct: 257 EYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIVNR 316
Query: 200 SDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPETHDVDATNARTALVHIT 259
++P+++ + + I++T A ++ A ++ LP+ + AR AL +
Sbjct: 317 FNHPSDIQRARSLVECTDAIEQTITWAKEYIKKAKDSLLCLPD------SPARKALFALA 370
Query: 260 QKIITRNK 267
K+ITR K
Sbjct: 371 DKVITRKK 378
>sp|P31171|PREA_CYAPA Prenyl transferase OS=Cyanophora paradoxa GN=preA PE=3 SV=1
Length = 323
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 164/275 (59%), Gaps = 36/275 (13%)
Query: 18 LSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLA 77
+S + N +I RR +AEITE+IH ASL+HDD+LD++D RRGI ++ S G K+A
Sbjct: 56 ISKATMENEIITSRHRR---LAEITEIIHTASLVHDDILDESDVRRGIPTVHSDFGTKIA 112
Query: 78 ILAGDLLISRALVALASLKHTEVI---------------------------MECYMQKTY 110
ILAGD L +++ LA+L+ EV+ +E Y++K++
Sbjct: 113 ILAGDFLFAQSSWYLANLESLEVVKLISKVITDFAEGEIRRGLNQFKVDLTLEEYLEKSF 172
Query: 111 NKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASL 170
KTA+L++ S KA A LS VA + YG++LGLA+Q++DDILDFT ++ LGK S
Sbjct: 173 YKTASLLAASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGKPSC 232
Query: 171 TDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHA 230
+DL+ G +TAP+LFA+E+ +L I P + + L+ + ++ I++T ELA++HA
Sbjct: 233 SDLKKGNLTAPVLFALEQNSELIPLIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHA 292
Query: 231 SLAAAAIDSLPETHDVDATNARTALVHITQKIITR 265
+A +++LP ++++ AL IT+ ++ R
Sbjct: 293 QVAIQCLENLP------PSSSKEALKLITKYVLER 321
>sp|Q8S948|SPS1_ARATH Solanesyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1
PE=1 SV=1
Length = 406
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 137/233 (58%), Gaps = 27/233 (11%)
Query: 38 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 97
+AEI EMIH ASLIHDDVLD++D RRG ++ + G ++A+LAGD + ++A LA+L++
Sbjct: 156 LAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLEN 215
Query: 98 TEVI---------------------MEC------YMQKTYNKTAALVSNSCKAVAYLSGQ 130
EVI +C Y+ K++ KTA+LV+ S K A S
Sbjct: 216 LEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRV 275
Query: 131 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFP 190
+V +E+GKNLGL++Q++DDILDFT ++ LGK + +DL G +TAP++FA+E P
Sbjct: 276 EPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEREP 335
Query: 191 QLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPET 243
+LR I S +++ +E + K GI+R ELA + A A + LP +
Sbjct: 336 RLREIIESEFCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQCLPRS 388
>sp|Q9TLS1|PREA_CYACA Prenyl transferase OS=Cyanidium caldarium GN=preA PE=3 SV=1
Length = 323
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 151/264 (57%), Gaps = 33/264 (12%)
Query: 31 LRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALV 90
++ QQ +AE+TE+IH A+L+HDDV+D++ RRG S++ GNK+A+ AGD L +++
Sbjct: 66 IKTSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSVNKTFGNKIAVFAGDFLFAQSSW 125
Query: 91 ALASLKHTEVIMEC---------------------------YMQKTYNKTAALVSNSCKA 123
LA++ + EV+ Y++K++NKTA+L++ SCK+
Sbjct: 126 YLANINNLEVVKAISKVITDLAEGELQQNLTQFNTYYSIIKYLEKSFNKTASLIAASCKS 185
Query: 124 VAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPIL 183
LS + + + + YGKNLGLA+Q+IDDILD T +S +LGK + +DL+ G +TAP+L
Sbjct: 186 CCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGKMTTSDLKLGNLTAPVL 245
Query: 184 FAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPET 243
FA+ + +L I +++ + + +++ I+ + +LA +H A +I LP +
Sbjct: 246 FALTKNSKLFKIIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIEAAINSIKDLPTS 305
Query: 244 HDVDATNARTALVHITQKIITRNK 267
+ D +L+ I ++ R K
Sbjct: 306 SEKD------SLIEIAYDLLNRYK 323
>sp|Q1XDL8|PREA_PORYE Prenyl transferase OS=Porphyra yezoensis GN=preA PE=3 SV=1
Length = 323
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 152/263 (57%), Gaps = 33/263 (12%)
Query: 30 DLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRAL 89
D+ Q+ +AEITE+IH ASL+HDD++D+ TRRG+ ++ ++ K+A+LAGD L +++
Sbjct: 65 DINTGQKRLAEITEIIHTASLVHDDIIDECTTRRGVKTVHNLFNTKIAVLAGDFLFAQSS 124
Query: 90 VALASLKHTEVI---------------------------MECYMQKTYNKTAALVSNSCK 122
LA++++ V+ ++ Y++K++ KTA+L++ SC+
Sbjct: 125 WYLANIENLAVVKAISKVITDFAEGEIRQGLVHFDPSISIDAYIEKSFYKTASLIAASCR 184
Query: 123 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 182
A L+G ++ + YGK++GLA+Q++DD+LD TG++ SLGK + DL NG +T+P+
Sbjct: 185 GAAMLNGSNHQINNDLYLYGKHMGLAFQIMDDVLDITGSTKSLGKPAGADLINGNLTSPL 244
Query: 183 LFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPE 242
LF++ + L I+ N ++ L + +S GI + +LA + A + + LP+
Sbjct: 245 LFSLTQEASLNDLIDREFCNSTDIASTLFLIKRSGGITKAKDLAKEQVQAALSCLQFLPQ 304
Query: 243 THDVDATNARTALVHITQKIITR 265
+ V ++L +T IITR
Sbjct: 305 STPV------SSLKELTHFIITR 321
>sp|P51268|PREA_PORPU Prenyl transferase OS=Porphyra purpurea GN=preA PE=3 SV=1
Length = 323
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 148/263 (56%), Gaps = 33/263 (12%)
Query: 30 DLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRAL 89
+++ Q+ +AEITE+IH ASL+HDDV+D+ TRRG ++ + K+A+LAGD L +++
Sbjct: 65 EIKPGQRRLAEITEIIHTASLVHDDVIDECSTRRGEKTVHKLFNTKIAVLAGDFLFAQSS 124
Query: 90 VALASLKHTEVI---------------------------MECYMQKTYNKTAALVSNSCK 122
LA++ + EV+ ++ Y++K++ KTA+LV+ SC+
Sbjct: 125 WYLANIGNLEVVKVITKVITDFAEGEIRQGLVHFDPSISIDDYIEKSFYKTASLVAASCR 184
Query: 123 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 182
A L+ ++ + YGK++GLA+Q++DD+LD G++ SLGK S D NG +TAPI
Sbjct: 185 GAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAGSTKSLGKPSGADFMNGNLTAPI 244
Query: 183 LFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPE 242
LFA+ + +L I + ++ + L + KS GI + +LA + A + LP+
Sbjct: 245 LFALTQEGKLDQLIQREFSDERDISLALFLIKKSGGITKAKDLAKEQVQAALCCLQFLPK 304
Query: 243 THDVDATNARTALVHITQKIITR 265
+ V ++L +T IITR
Sbjct: 305 SAPV------SSLKELTHFIITR 321
>sp|P18900|COQ1_YEAST Hexaprenyl pyrophosphate synthase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=COQ1 PE=1
SV=1
Length = 473
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 117/214 (54%), Gaps = 11/214 (5%)
Query: 58 DADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVI---MECYMQKTYNKTA 114
D DT L V KL + D + L L H ++I E Y+ KTY KTA
Sbjct: 267 DIDTIENGHKLLPVPSKKLEVKEHDFRVPSRQQGL-QLSHDQIIETAFEYYIHKTYLKTA 325
Query: 115 ALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLR 174
AL+S SC+ A LSG V +++G+NLG+ +QL+DD+LDFT + LGK S DL+
Sbjct: 326 ALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLK 385
Query: 175 NGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAA 234
GI TAP+LFA +E P L I+ + +V+ ++ + +GI +T LA ++ A
Sbjct: 386 LGIATAPVLFAWKEDPSLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKAL 445
Query: 235 AAI-DSLPETHDVDATNARTALVHITQKIITRNK 267
+ DSLPE ++AR+AL +T I+TR K
Sbjct: 446 QNLRDSLPE------SDARSALEFLTNSILTRRK 473
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 52/68 (76%)
Query: 34 RQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALA 93
+Q+ +AEI EMIH ASL+HDDV+D +DTRRG S ++ NK+A+LAGD L+ RA V+++
Sbjct: 174 KQRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSIS 233
Query: 94 SLKHTEVI 101
L + EV+
Sbjct: 234 RLHNPEVV 241
>sp|P55785|HEPS2_GEOSE Heptaprenyl diphosphate synthase component 2 OS=Geobacillus
stearothermophilus GN=hepT PE=3 SV=1
Length = 320
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 128/237 (54%), Gaps = 30/237 (12%)
Query: 34 RQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALA 93
R + +A E+IH+ASL+HDDV+DDAD RRG ++ + N+ A+ GD L +R+L +A
Sbjct: 65 RMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLERMA 124
Query: 94 SLKH-------TEVIMEC--------------------YMQKTYNKTAALVSNSCKAVAY 126
L + + I+E Y+++ KTA L++ SC+ A
Sbjct: 125 ELGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLGAL 184
Query: 127 LSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM 186
+G E + + +G +G+++Q+ DDILDFTGT LGK + +DL G +T P+L+A+
Sbjct: 185 AAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLYAL 244
Query: 187 EEFPQLRAFINS--SSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLP 241
+ +++A I + + A + ++ + ++ I+R+ L+ ++ A +D LP
Sbjct: 245 SD-ERVKAAIAAVGPETDVAEMAAVISAIKRTDAIERSYALSDRYLDKALHLLDGLP 300
>sp|P31114|HEPS2_BACSU Heptaprenyl diphosphate synthase component 2 OS=Bacillus subtilis
(strain 168) GN=hepT PE=1 SV=1
Length = 348
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 38/261 (14%)
Query: 36 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 95
+ +A EMIH+ASL+HDDV+DDA+ RRG ++ + N++A+ GD +++ +L + +
Sbjct: 95 KYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRI 154
Query: 96 KH-------TEVIMEC--------------------YMQKTYNKTAALVSNSCKAVAYLS 128
++ I+E Y+++ KTA L++ SC+ A S
Sbjct: 155 NEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 214
Query: 129 GQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 188
G E++ + +G +G++YQ+IDDILDFT T LGK DL G +T P+L+A++
Sbjct: 215 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALKN 274
Query: 189 FPQLR---AFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPETHD 245
P L+ INS + ++ I+E + K+ I+ + ++ + A +++LP
Sbjct: 275 -PALKNQLKLINSET-TQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTLPRGR- 331
Query: 246 VDATNARTALVHITQKIITRN 266
AR++L I + I R
Sbjct: 332 -----ARSSLAAIAKYIGKRK 347
>sp|P0AD58|ISPB_SHIFL Octaprenyl-diphosphate synthase OS=Shigella flexneri GN=ispB PE=3
SV=1
Length = 323
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 39/262 (14%)
Query: 38 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRA---LVALAS 94
IA + E IH A+L+HDDV+D++D RRG + ++ GN ++L GD + +RA + +L S
Sbjct: 69 IAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS 128
Query: 95 LKHTEVIMEC------------------------YMQKTYNKTAALVSNSCKAVAYLSGQ 130
LK EV+ E YM+ Y+KTA L + + L+G
Sbjct: 129 LKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGC 188
Query: 131 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM---- 186
E +YG+ LG A+QLIDD+LD+ LGK DL G T P+L AM
Sbjct: 189 TPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGT 248
Query: 187 -EEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPETHD 245
E+ +R I + ++ +LE + ++ T + A + A A AA+ LP+
Sbjct: 249 PEQAQMIRTAIEQGNGRHL-LEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPD--- 304
Query: 246 VDATNARTALVHITQKIITRNK 267
T R AL+ + + R++
Sbjct: 305 ---TPWREALIGLAHIAVQRDR 323
>sp|P0AD57|ISPB_ECOLI Octaprenyl-diphosphate synthase OS=Escherichia coli (strain K12)
GN=ispB PE=1 SV=1
Length = 323
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 39/262 (14%)
Query: 38 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRA---LVALAS 94
IA + E IH A+L+HDDV+D++D RRG + ++ GN ++L GD + +RA + +L S
Sbjct: 69 IAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS 128
Query: 95 LKHTEVIMEC------------------------YMQKTYNKTAALVSNSCKAVAYLSGQ 130
LK EV+ E YM+ Y+KTA L + + L+G
Sbjct: 129 LKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGC 188
Query: 131 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM---- 186
E +YG+ LG A+QLIDD+LD+ LGK DL G T P+L AM
Sbjct: 189 TPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGT 248
Query: 187 -EEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPETHD 245
E+ +R I + ++ +LE + ++ T + A + A A AA+ LP+
Sbjct: 249 PEQAQMIRTAIEQGNGRHL-LEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPD--- 304
Query: 246 VDATNARTALVHITQKIITRNK 267
T R AL+ + + R++
Sbjct: 305 ---TPWREALIGLAHIAVQRDR 323
>sp|P44916|ISPB_HAEIN Octaprenyl-diphosphate synthase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ispB PE=1 SV=1
Length = 329
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 39/260 (15%)
Query: 39 AEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH- 97
A E IH ASL+HDDV+D++D RRG + ++ GN ++L GD + +RA +A L+
Sbjct: 76 ATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVAQLESL 135
Query: 98 ---------TEVIMEC-----------------YMQKTYNKTAALVSNSCKAVAYLSGQR 131
T V+ E YM+ Y+KTA L + +A A ++G
Sbjct: 136 KILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGT 195
Query: 132 EEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM----- 186
E +YG+ LG A+QL+DD+LD++ + +LGK DL G T P+L AM
Sbjct: 196 EAQEKALQDYGRYLGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLHAMRHGNA 255
Query: 187 EEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPETHDV 246
++ +R I A +D +L + + + A + A A AI+ LPE+
Sbjct: 256 QQAALIREAIEQGGKREA-IDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPESE-- 312
Query: 247 DATNARTALVHITQKIITRN 266
+ AL+ + + RN
Sbjct: 313 ----YKQALISLAYLSVDRN 328
>sp|O66129|HEXB_MICLU Hexaprenyl-diphosphate synthase large subunit
((2E,6E)-farnesyl-diphosphate specific) OS=Micrococcus
luteus GN=hexs-b PE=1 SV=1
Length = 325
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 51/262 (19%)
Query: 43 EMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTE--- 99
E++H+ASL+HDD +D++D RRG S+ AI G L++RAL +A++ +++
Sbjct: 74 ELVHMASLVHDDYIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKFHQ 133
Query: 100 ------------------------VIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVA 135
V Y+++ KTA L+ SC A LS Q +E +
Sbjct: 134 IFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIEASCHLGA-LSSQLDEQS 192
Query: 136 TLAF-EYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM-----EEF 189
T ++G +G++YQ+IDDILD+T A+LGK +D+RNG IT P++ A+ ++
Sbjct: 193 TYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIANLKEQDD 252
Query: 190 PQLRAFIN---SSSDNPANVDVILEYL---GKSHGIQRTTELALKHASLAAAAIDSLPET 243
+L A + S+SD D + +Y+ K +GI+ L+ K+ A + L +
Sbjct: 253 DKLEAVVKHLTSTSD-----DEVYQYIVSQVKQYGIEPAELLSRKYGDKAKYHLSQLQD- 306
Query: 244 HDVDATNARTALVHITQKIITR 265
+N + L I +K++ R
Sbjct: 307 -----SNIKDYLEEIHEKMLKR 323
>sp|O24743|SDSA_RHOCA All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate
specific) OS=Rhodobacter capsulatus GN=sdsA PE=1 SV=1
Length = 325
Score = 94.4 bits (233), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 37/263 (14%)
Query: 33 RRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVAL 92
+ Q +A I EM+H A+L+HDDV+D++ RRG + ++ N+ A+L GD LI+RA L
Sbjct: 68 KHAQKLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIARAFDLL 127
Query: 93 ASLKHT----------------EVIM-----------ECYMQKTYNKTAALVSNSCKAVA 125
L + EV+ + Y+Q + KT+ L + + A
Sbjct: 128 VDLDNMILLKDFSTGTCEIAEGEVLQLQAQHQPDTTEDIYLQIIHGKTSRLFELATEGAA 187
Query: 126 YLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFA 185
L+G+ E L + + G A+Q+IDDILD+T + +LGK DL G T P++ A
Sbjct: 188 ILAGKPEYREPLR-RFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPTLPLIAA 246
Query: 186 MEEFP-QLRAFINSS--SDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPE 242
M+ + R I S + + ++ ++ + S + + A + A A++ LPE
Sbjct: 247 MQNTQGEQRDLIRRSIATGGTSQLEQVIAIVQNSGALDYCHKRATEETERALQALEILPE 306
Query: 243 THDVDATNARTALVHITQKIITR 265
+ R ALV++T+ + R
Sbjct: 307 ------STYRQALVNLTRLALDR 323
>sp|Q53479|IDSA_METTM Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=idsA PE=1 SV=3
Length = 325
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 40/263 (15%)
Query: 38 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 97
+A E+IH SLIHDD++DD + RRG S+ + G +AILAGD+L S+A A+
Sbjct: 68 VAAAIELIHTFSLIHDDIMDDDEMRRGEPSVHVIWGEPMAILAGDVLFSKAFEAVIRNGD 127
Query: 98 TE--------VIMEC-----------------------YMQKTYNKTAALVSNSCKAVAY 126
+E V+ C YM+ Y KTAAL++ + KA A
Sbjct: 128 SERVKDALAVVVDSCVKICEGQALDMGFEERLDVTEDEYMEMIYKKTAALIAAATKAGAI 187
Query: 127 LSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM 186
+ G E +YGK +GLA+Q+ DD LD SLGK +D+ G +T ++ A+
Sbjct: 188 MGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKAL 247
Query: 187 EEFPQ---LRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPET 243
EE + R S + +V +E + Q E+AL + +A ++ L +
Sbjct: 248 EEASEEDRERLISILGSGDEGSVAEAIEIFERYGATQYAHEVALDYVRMAKERLEILED- 306
Query: 244 HDVDATNARTALVHITQKIITRN 266
++AR AL+ I ++ R
Sbjct: 307 -----SDARDALMRIADFVLERE 324
>sp|Q58270|IDSA_METJA Short chain isoprenyl diphosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=idsA PE=3 SV=1
Length = 327
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 30/176 (17%)
Query: 42 TEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHT--- 98
E+IH +LIHDD++D+ D RRG ++ V G +AILAGDLL ++A A++ +K
Sbjct: 76 VELIHNYTLIHDDIMDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVSRIKDNKKA 135
Query: 99 -EVI--------------------------MECYMQKTYNKTAALVSNSCKAVAYLSGQR 131
EV+ ME Y+ KT AL+ S A ++
Sbjct: 136 HEVLKILSKACVEVCEGQAMDMEFENYYPTMEEYLDMIRKKTGALLEASVGIGAVMADCN 195
Query: 132 EEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAME 187
EE EY K +GL +Q+ DD+LD G LGK +D+R G T ++ A++
Sbjct: 196 EEEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHALK 251
>sp|P95999|GGPS_SULSO Geranylgeranyl diphosphate synthase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=gds
PE=3 SV=2
Length = 332
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 18 LSPNVL--GNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNK 75
L P VL + LI R R A E++H +L+HDD++D+ RRG+ ++ G
Sbjct: 47 LRPLVLVSSSDLIGGDRERAYKAAAAVEILHNFTLVHDDIMDNDGLRRGLPTVHVKWGEP 106
Query: 76 LAILAGDLLISRALVAL-ASLK---------------------------------HTEVI 101
+AILAGD L ++A AL +LK +V
Sbjct: 107 MAILAGDYLHAKAFEALNEALKGLDGNTFYKAFSIFITSIEIISEGQAMDMSFENRLDVT 166
Query: 102 MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGT 161
E Y+Q KTA L S S ++ ++V EYG NLG+++Q++DDIL G
Sbjct: 167 EEEYIQMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGIIGD 226
Query: 162 SASLGKASLTDLRNGIITAPILFAMEEFPQ-----LRAFINSSSDNPANVDVILEYLGKS 216
LGK +D+R G T ++ + E + L + + + +++ E + K
Sbjct: 227 EKELGKPIYSDIREGKKTILVIKTLSEATEDEKKILVSTLGNKEAKKEDLERASEIIRK- 285
Query: 217 HGIQRTTELALKHASLAAAAIDSLPETHDVDATNARTALVHITQKIITRNK 267
H +Q +LA K++ LA + +P V A AL ++ Q I R K
Sbjct: 286 HSLQYAYDLAKKYSDLAIENLREIP----VSNKTAEKALKYLAQFTIQRRK 332
>sp|O26156|IDSA_METTH Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=idsA PE=3 SV=1
Length = 325
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 42/264 (15%)
Query: 38 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 97
+A E+IH SLIHDD++DD + RRG ++ + G +AILAGD+L S+A A+
Sbjct: 68 VAAAIELIHTFSLIHDDIMDDDEIRRGEPAVHVLWGEPMAILAGDVLFSKAFEAVIRNGD 127
Query: 98 TEVIMEC-------------------------------YMQKTYNKTAALVSNSCKAVAY 126
+E++ E YM+ Y KTAAL++ + KA A
Sbjct: 128 SEMVKEALAVVVDSCVKICEGQALDMGFEERLDVTEEEYMEMIYKKTAALIAAATKAGAI 187
Query: 127 LSG-QREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFA 185
+ G +E+A L +YG+ +GLA+Q+ DD LD SLGK +D+ G +T ++ A
Sbjct: 188 MGGGSPQEIAALE-DYGRCIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKA 246
Query: 186 ME---EFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPE 242
+E E + R S + V +E + + +AL H +A ++ L E
Sbjct: 247 LERASEKDRERLISILGSGDEKLVAEAIEIFERYGATEYAHAVALDHVRMAKERLEVLEE 306
Query: 243 THDVDATNARTALVHITQKIITRN 266
++AR AL I ++ R
Sbjct: 307 ------SDAREALAMIADFVLERE 324
>sp|P39464|GGPS_SULAC Geranylgeranyl diphosphate synthase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=gds PE=1 SV=1
Length = 330
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 121/279 (43%), Gaps = 52/279 (18%)
Query: 32 RRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALV- 90
R R E++H +L+HDD++D + RRG+ ++ G LAILAGDLL ++A
Sbjct: 61 RERAYYAGAAIEVLHTFTLVHDDIMDQDNIRRGLPTVHVKYGLPLAILAGDLLHAKAFQL 120
Query: 91 ---ALASLKHTEVI--------------------MEC----------YMQKTYNKTAALV 117
AL L +I ME Y+ KTAAL
Sbjct: 121 LTQALRGLPSETIIKAFDIFTRSIIIISEGQAVDMEFEDRIDIKEQEYLDMISRKTAALF 180
Query: 118 SNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGI 177
S S A ++G + L ++G NLG+A+Q++DDIL T LGK +D+R G
Sbjct: 181 SASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIREGK 240
Query: 178 ITAPILFAMEEFPQ------LRAFINSSSDNP---ANVDVILEYLGKSHGIQRTTELALK 228
T ++ +E + L+A N S+ ++ D+I K + + LA K
Sbjct: 241 KTILVIKTLELCKEDEKKIVLKALGNKSASKEELMSSADII-----KKYSLDYAYNLAEK 295
Query: 229 HASLAAAAIDSLPETHDVDATNARTALVHITQKIITRNK 267
+ A +++ + D+ AL ++ + I R K
Sbjct: 296 YYKNAIDSLNQVSSKSDIPG----KALKYLAEFTIRRRK 330
>sp|Q86YH6|DLP1_HUMAN Decaprenyl-diphosphate synthase subunit 2 OS=Homo sapiens GN=PDSS2
PE=1 SV=2
Length = 399
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 49/260 (18%)
Query: 35 QQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSV-MGNKLAILAGDLLISRALVALA 93
Q+ +AEITE+IH+A L+H +++ + + G L + GNK+AIL+GD L++ A LA
Sbjct: 145 QRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLA 204
Query: 94 SLKHTEVI-------------------------------MECYMQKTYNKTAALVSNSCK 122
L++T+V+ + + ++T+ AL++ SC+
Sbjct: 205 LLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQ 264
Query: 123 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 182
A L+ EV +AF+YGK++ +++++ D+ F S S+T N +AP+
Sbjct: 265 AAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEKTS---DSMTFNLN---SAPV 318
Query: 183 LFAMEEFPQLRAFIN--SSSDNPANVDV--ILEYLGKSHGIQRTTELALKHASLAAAAID 238
+ +EF +I + +D + E + G+ +L H + A A++
Sbjct: 319 VL-HQEFLGRDLWIKQIGEAQEKGRLDYAKLRERIKAGKGVTSAIDLCRYHGNKALEALE 377
Query: 239 SLPETHDVDATNARTALVHI 258
S P + AR+AL +I
Sbjct: 378 SFP------PSEARSALENI 391
>sp|Q5U2R1|DLP1_RAT Decaprenyl-diphosphate synthase subunit 2 OS=Rattus norvegicus
GN=Pdss2 PE=2 SV=1
Length = 401
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 48/260 (18%)
Query: 35 QQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSV-MGNKLAILAGDLLISRALVALA 93
Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+A+L+GD L++ A LA
Sbjct: 146 QRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKIAVLSGDFLLANACNGLA 205
Query: 94 SLKHTEVI--------------------------------MECYMQKTYNKTAALVSNSC 121
L++T+V+ + + ++T+ AL++ SC
Sbjct: 206 LLQNTKVVELLASALMDLVQGIYQENSASTQGNPIPDDIRISTWKEQTFLSHCALLAKSC 265
Query: 122 KAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAP 181
KA L+ V +AF+YGK++ +++++ D+ F AS K + +AP
Sbjct: 266 KAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPFIKDKASDSKTF------NLNSAP 319
Query: 182 ILFAMEEFPQ---LRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAID 238
++ E + ++ + N + E + G+ +L H + A A++
Sbjct: 320 VVLHQEFLGRDLWIKQIGEAQEKGRLNYTKLRETIKAGKGVTSAIDLCRYHGNKALEALE 379
Query: 239 SLPETHDVDATNARTALVHI 258
S P + AR+AL +I
Sbjct: 380 SFP------PSEARSALENI 393
>sp|P48368|CRTE_CYAPA Geranylgeranyl pyrophosphate synthase homolog OS=Cyanophora
paradoxa GN=crtE PE=3 SV=1
Length = 300
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 38/184 (20%)
Query: 43 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRA------------ 88
EMIH SLIHDD+ +D+ RRG + + G LAILAGD L++ A
Sbjct: 79 EMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVP 138
Query: 89 ------------------------LVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAV 124
++ L+S ++ +E +KT AL+ + +
Sbjct: 139 ADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAAVLSG 198
Query: 125 AYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILF 184
A L+G +E+ Y +N+GLA+Q+IDD+LD T LGK+ DL+ T P +
Sbjct: 199 ALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFW 258
Query: 185 AMEE 188
+EE
Sbjct: 259 GVEE 262
>sp|Q33DR3|DLP1_MOUSE Decaprenyl-diphosphate synthase subunit 2 OS=Mus musculus GN=Pdss2
PE=1 SV=2
Length = 401
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 48/260 (18%)
Query: 35 QQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSV-MGNKLAILAGDLLISRALVALA 93
Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+AIL+GD L++ A LA
Sbjct: 146 QRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLA 205
Query: 94 SLKHTEVI--------------------------------MECYMQKTYNKTAALVSNSC 121
L++T+V+ + + ++T+ AL++ SC
Sbjct: 206 LLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSC 265
Query: 122 KAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAP 181
+A L+ V +AF+YGK++ +++++ D+ F AS K + +AP
Sbjct: 266 QAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFIKDKASDSKTF------NLNSAP 319
Query: 182 ILFAMEEFPQ---LRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAID 238
++ E + ++ + N + E + G+ +L H + A A++
Sbjct: 320 VVLHQEFLGRDLWIKQIGEAQEKGSLNYSKLRETIKAGKGVTSAIDLCRYHGNKALEALE 379
Query: 239 SLPETHDVDATNARTALVHI 258
S P + AR+AL +I
Sbjct: 380 SFP------PSEARSALENI 393
>sp|P0A5H8|EFPP_MYCTU (2E,6E)-farnesyl diphosphate synthase OS=Mycobacterium tuberculosis
GN=Rv3398c PE=1 SV=1
Length = 359
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 30/172 (17%)
Query: 43 EMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVAL---------A 93
E++H SL+HDD++D + RR ++ ++ G+ +A+LAGD ++S A L A
Sbjct: 102 ELVHNFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGA 161
Query: 94 SLK---------------------HTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQRE 132
+L+ T+V ++ ++ KTAAL++ S + A L+G
Sbjct: 162 ALRAISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPR 221
Query: 133 EVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILF 184
V YG+++GLA+QL+DD+L G GK +DLR+ T P+ +
Sbjct: 222 SVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTW 273
>sp|P0A5H9|EFPP_MYCBO (2E,6E)-farnesyl diphosphate synthase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb3431c PE=3 SV=1
Length = 359
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 30/172 (17%)
Query: 43 EMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVAL---------A 93
E++H SL+HDD++D + RR ++ ++ G+ +A+LAGD ++S A L A
Sbjct: 102 ELVHNFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGA 161
Query: 94 SLK---------------------HTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQRE 132
+L+ T+V ++ ++ KTAAL++ S + A L+G
Sbjct: 162 ALRAISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPR 221
Query: 133 EVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILF 184
V YG+++GLA+QL+DD+L G GK +DLR+ T P+ +
Sbjct: 222 SVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTW 273
>sp|Q8PYS1|GFPS_METMA Geranylfarnesyl diphosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_0789 PE=1 SV=1
Length = 295
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 68/142 (47%), Gaps = 27/142 (19%)
Query: 43 EMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIM 102
EM+H ASLIHDD+LD RR + S G A+L GD LI+++ +A S +VI
Sbjct: 80 EMMHSASLIHDDLLDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKS-IAFISPYGEKVIQ 138
Query: 103 EC--------------------------YMQKTYNKTAALVSNSCKAVAYLSGQREEVAT 136
+ Y + Y KTA+L + S AY G EE+A
Sbjct: 139 DFGKAGMDMAEGEVLDLKLEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAE 198
Query: 137 LAFEYGKNLGLAYQLIDDILDF 158
+G LG AYQ++DDIL+F
Sbjct: 199 RFSHFGNALGTAYQIVDDILEF 220
>sp|Q94ID7|GGPPS_HEVBR Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea
brasiliensis GN=GGPS PE=1 SV=1
Length = 370
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 43 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRAL--VALASLK-- 96
EMIH SLIHDD+ +D+ D RRG + V G +A+LAGD L++ A +A+++L
Sbjct: 148 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVS 207
Query: 97 --------------------------------HTEVIMECYMQKTYNKTAALVSNSCKAV 124
+EV +E +KTA L+ +
Sbjct: 208 SARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLG 267
Query: 125 AYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILF 184
A L G +E +Y +++GL +Q++DDILD T +S LGK + DL +T P L
Sbjct: 268 AILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLL 327
Query: 185 AMEEFPQLRAFINSSS 200
+E+ + +N +
Sbjct: 328 GIEKSREFAEKLNKEA 343
>sp|Q43133|GGPPS_SINAL Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic
OS=Sinapis alba GN=GGPS1 PE=1 SV=1
Length = 366
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 41/199 (20%)
Query: 43 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV 100
EMIH SLIHDD+ +D+ D RRG + V G +A+LAGD L+S A LAS +EV
Sbjct: 141 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEV 200
Query: 101 I---------------------------------------MECYMQKTYNKTAALVSNSC 121
+E +KTAAL+ S
Sbjct: 201 SPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASA 260
Query: 122 KAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAP 181
+ G +E ++ + +GL +Q++DDILD T +S LGK + DL +T P
Sbjct: 261 VLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLIADKLTYP 320
Query: 182 ILFAMEEFPQLRAFINSSS 200
L +E+ + +N+ +
Sbjct: 321 KLMGLEKSREFAEKLNTEA 339
>sp|P34802|GGPP1_ARATH Heterodimeric geranylgeranyl pyrophosphate synthase large subunit
1, chloroplastic OS=Arabidopsis thaliana GN=GGPPS1 PE=1
SV=2
Length = 371
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 42/197 (21%)
Query: 43 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV 100
EMIH SLIHDD+ +D+ D RRG + V G +A+LAGD L+S A LAS ++V
Sbjct: 145 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDV 204
Query: 101 IMECYMQKTY----------------------------------------NKTAALVSNS 120
+ + + +KTAAL+ S
Sbjct: 205 VSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEAS 264
Query: 121 CKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITA 180
A + G ++ ++ + +GL +Q++DDILD T +S LGK + DL +T
Sbjct: 265 AVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTY 324
Query: 181 PILFAMEEFPQLRAFIN 197
P + +E+ + +N
Sbjct: 325 PKIMGLEKSREFAEKLN 341
>sp|Q9ZU77|GGPP7_ARATH Geranylgeranyl pyrophosphate synthase 7, chloroplastic
OS=Arabidopsis thaliana GN=At2g18620 PE=2 SV=1
Length = 347
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 39/185 (21%)
Query: 43 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALAS------ 94
EMIH SLIHDD+ +D+ D RRG + V G +A+LAGD LIS A LA+
Sbjct: 124 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATSTAVSP 183
Query: 95 -------------------------------LKHTEVIMECYMQKTYNKTAALVSNSCKA 123
+ +V +E +KTA L+ +
Sbjct: 184 ARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVL 243
Query: 124 VAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPIL 183
A + G +E + + +GL +Q++DDILD T +S LGK + DL +T P L
Sbjct: 244 GAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKL 303
Query: 184 FAMEE 188
+E+
Sbjct: 304 MGLEK 308
>sp|Q42698|GGPPS_CATRO Geranylgeranyl pyrophosphate synthase, chloroplastic
OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1
Length = 357
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 52/192 (27%)
Query: 42 TEMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRAL---------- 89
EMIH SL+HDD+ +D+ D RRG + V G +A+LAGD L++ A
Sbjct: 134 VEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGV 193
Query: 90 ---------------------------------VALASLKHTEVIMECYMQKTYNKTAAL 116
+A L+H E I +KTAAL
Sbjct: 194 SSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFI-------HIHKTAAL 246
Query: 117 VSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNG 176
+ S A + G +E + ++ + +GL +Q++DDILD T +S LGK + DL
Sbjct: 247 LEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVAD 306
Query: 177 IITAPILFAMEE 188
+T P L +++
Sbjct: 307 KVTYPKLLGIDK 318
>sp|P80042|GGPPS_CAPAN Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum
annuum GN=GGPS1 PE=3 SV=1
Length = 369
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 40/197 (20%)
Query: 43 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLI--------------- 85
EMIH SLIHDD+ +D+ D RRG + + G +A+LAGD L+
Sbjct: 147 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVT 206
Query: 86 -SRALVALASLKHT--------------------EVIMECYMQKTYNKTAALVSNSCKAV 124
SR + A+A L + V +E +KTAAL+ +S
Sbjct: 207 PSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLG 266
Query: 125 AYLSGQRE-EVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPIL 183
A L G EV L + + +GL +Q++DDILD T +S LGK + DL T P L
Sbjct: 267 AILGGGTNVEVEKLR-RFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKL 325
Query: 184 FAMEEFPQLRAFINSSS 200
+E+ + A +N +
Sbjct: 326 LGLEKAKEFAAELNREA 342
>sp|Q9UWR6|GFPS_AERPX Geranylfarnesyl diphosphate synthase OS=Aeropyrum pernix GN=fgs
PE=1 SV=1
Length = 318
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 38/206 (18%)
Query: 18 LSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLA 77
L+ +LG L+ R +A E H SLIHDD++D + RRG+ + V G+ A
Sbjct: 40 LTARMLGG---LEAEARAIPLAASIETAHTFSLIHDDIMDRDEVRRGVPTTHVVYGDDWA 96
Query: 78 ILAGDLLISRALVALA-----SLKHTE------VIMECYMQ------------KTYN--- 111
ILAGD L + A +A + H + V+ E +Q +T++
Sbjct: 97 ILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLSEAAIQISRGQAYDMLFEETWDVDV 156
Query: 112 ---------KTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 162
KT AL+ + + A +G E+ + E G N G+A+Q+ DDIL G
Sbjct: 157 ADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDP 216
Query: 163 ASLGKASLTDLRNGIITAPILFAMEE 188
GK DLR G T +++A+++
Sbjct: 217 KVTGKPVYNDLRRGKKTLLVIYAVKK 242
>sp|Q08291|ISPA_GEOSE Farnesyl diphosphate synthase OS=Geobacillus stearothermophilus
PE=1 SV=1
Length = 297
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 39/205 (19%)
Query: 43 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV 100
EMIH SLIHDD+ +D+ D RRG + V G +AILAGD L++ A + + +
Sbjct: 76 EMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDERI 135
Query: 101 IMECYMQ--------------------------KT----------YNKTAALVSNSCKAV 124
++ KT +KT ++ S A
Sbjct: 136 PPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVHAG 195
Query: 125 AYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILF 184
A + G E+ +LGLA+Q+ DDILD G +GK +D N T P L
Sbjct: 196 ALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALL 255
Query: 185 AMEEFPQLRAF-INSSSDNPANVDV 208
++ + AF I ++ + N DV
Sbjct: 256 SLAGAKEKLAFHIEAAQRHLRNADV 280
>sp|Q9LRR0|GGPP8_ARATH Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic
OS=Arabidopsis thaliana GN=At3g14510 PE=5 SV=2
Length = 361
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 43/187 (22%)
Query: 43 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKL---------------------AIL 79
EMIH +SLIHDD+ +D+AD RRG + V G + ++
Sbjct: 136 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLV 195
Query: 80 AGDLLISRALVALAS-------------------LKHTEVIMECYMQKTYNKTAALVSNS 120
A + +I RA+V LA L +V +E +KTAAL+ +
Sbjct: 196 ASERMI-RAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAA 254
Query: 121 CKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITA 180
A + G EE +Y + +GL +Q++DDILD T ++ LGK + D+ G +T
Sbjct: 255 AVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTY 314
Query: 181 PILFAME 187
P L +E
Sbjct: 315 PRLIGLE 321
>sp|Q3IPL1|GFPS_NATPD Geranylfarnesyl diphosphate synthase OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=idsA3 PE=1 SV=1
Length = 341
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 112/258 (43%), Gaps = 43/258 (16%)
Query: 43 EMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLIS--------------RA 88
E+I +LIHDD++DD D RRG+ ++ + AILAGD L S R+
Sbjct: 92 EVIQSFTLIHDDIMDDDDLRRGVPAVHREYDLETAILAGDTLYSKAFEYMLDTGAPAERS 151
Query: 89 LVALASLKHT------------------EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQ 130
+ AL L T +V E Y++ KTA L + + A L G
Sbjct: 152 VEALDELATTCTEICEGQALDVDFENRSDVTTEEYLEMVEFKTAVLYAAAASIPAILLGS 211
Query: 131 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFP 190
+E YG ++G A+Q+ DD+LD T S LGK +DL T L A ++
Sbjct: 212 DDETVEALHGYGLDIGRAFQIQDDLLDLTAPSDELGKQRGSDLVENKRTVITLHARDQGI 271
Query: 191 QLRAFINSSSDNP--ANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPETHDVDA 248
+ + SD+P A ++ ++ L + I E+AL + +D LPE
Sbjct: 272 DVEGLV---SDDPSDAEIEAAVQTLEDAGSIDFAREMALDLVTSGKERLDVLPENE---- 324
Query: 249 TNARTALVHITQKIITRN 266
AR L I ++ R+
Sbjct: 325 --ARQLLEDIADFLVERS 340
>sp|O04046|GGPP2_ARATH Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2
OS=Arabidopsis thaliana GN=GGPPS2 PE=1 SV=2
Length = 376
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 43 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLIS-------------- 86
EMIH SLI DD+ +D+ D RRG + V G +AIL+G L+S
Sbjct: 154 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSE 213
Query: 87 ---------------RALVALAS-------LKHTEVIMECYMQKTYNKTAALVSNSCKAV 124
R LVA + L EV +E +KTA L+ +
Sbjct: 214 RMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLG 273
Query: 125 AYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILF 184
A + G +E ++ + +GL +Q++DDILD T +S LGK + D G +T P L
Sbjct: 274 AIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLI 333
Query: 185 AMEE 188
+E+
Sbjct: 334 GLEK 337
>sp|Q8PW34|GGPP_METMA Geranylgeranyl diphosphate synthase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=MM_1767 PE=3 SV=1
Length = 324
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 32/185 (17%)
Query: 43 EMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV-I 101
E++H +LIHDD++D D RRG+ ++ G AILAGD L S+A L+ +++ V +
Sbjct: 75 ELVHNFTLIHDDIMDRDDIRRGMPAVHVKWGEAGAILAGDTLYSKAFEILSKVENEPVRV 134
Query: 102 MEC-------------------------------YMQKTYNKTAALVSNSCKAVAYLSGQ 130
++C Y++ KT+ L + + K A L G
Sbjct: 135 LKCMDVLSKTCTEICEGQWLDMDFETRKKVTESEYLEMVEKKTSVLYAAAAKIGALLGGA 194
Query: 131 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFP 190
+EVA EYG+ +G+ +Q+ DD+LD T LGK +DL G T ++ A E+
Sbjct: 195 SDEVAEALSEYGRLIGIGFQMYDDVLDMTAPEEVLGKVRGSDLMEGKYTLIVINAFEKGV 254
Query: 191 QLRAF 195
+L F
Sbjct: 255 KLDIF 259
>sp|Q9SLG2|GGPP4_ARATH Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana
GN=GGPP4 PE=2 SV=1
Length = 372
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 43 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLIS-------------- 86
EMIH SLI DD+ +D+ D RRG + V G +AIL+G L++
Sbjct: 150 EMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSK 209
Query: 87 ---RALVALA-------------------SLKHTEVIMECYMQKTYNKTAALVSNSCKAV 124
RA+ LA L+ +V +E +KT +L+ S
Sbjct: 210 KMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIG 269
Query: 125 AYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILF 184
A + G E+ + + +GL +Q++DDILD T +S LGK + D G +T P +
Sbjct: 270 AVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVI 329
Query: 185 AMEE 188
+E+
Sbjct: 330 GVEK 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,846,071
Number of Sequences: 539616
Number of extensions: 3386123
Number of successful extensions: 9708
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 9510
Number of HSP's gapped (non-prelim): 138
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)