Your job contains 1 sequence.
>024464
MDQGSYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHK
MAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPS
SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK
VIGKALVLDEIINYIQSLQRQFLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVS
QATREYSRGTSPDWLHMQIGGGFERMT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024464
(267 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 677 1.3e-66 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 588 3.6e-57 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 535 1.5e-51 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 522 3.6e-50 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 404 1.1e-37 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 402 1.9e-37 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 396 8.0e-37 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 391 2.7e-36 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 385 1.2e-35 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 383 1.9e-35 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 374 1.7e-34 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 359 6.7e-33 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 357 1.1e-32 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 354 2.3e-32 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 352 3.7e-32 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 339 8.8e-31 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 338 1.1e-30 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 335 2.3e-30 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 328 1.3e-29 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 326 2.1e-29 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 335 2.2e-29 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 321 7.1e-29 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 314 3.9e-28 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 219 9.6e-27 2
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 284 5.9e-25 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 277 3.3e-24 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 276 4.2e-24 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 189 4.5e-17 2
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 208 6.7e-17 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 210 2.6e-16 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 202 2.9e-16 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 204 3.9e-16 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 204 6.6e-16 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 198 9.5e-16 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 196 1.3e-15 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 198 5.9e-15 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 189 5.5e-14 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 185 3.7e-13 1
UNIPROTKB|Q69WX7 - symbol:P0417G12.19 "Basic helix-loop-h... 164 3.1e-12 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 172 8.1e-12 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 174 2.8e-11 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 174 3.0e-11 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 165 4.8e-11 1
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 152 8.1e-11 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 169 9.4e-11 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 167 2.3e-10 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 166 3.5e-10 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 162 4.5e-10 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 166 5.4e-10 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 165 7.0e-10 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 144 7.1e-10 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 142 1.2e-09 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 157 3.2e-09 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 122 4.1e-09 2
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 144 8.2e-09 2
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 153 9.4e-09 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 144 1.6e-08 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 151 1.6e-08 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 150 2.5e-08 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 146 2.7e-08 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 149 3.7e-08 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 142 5.2e-08 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 142 5.8e-08 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 144 8.4e-08 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 139 1.1e-07 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 141 1.2e-07 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 142 1.3e-07 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 136 2.3e-07 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 141 3.5e-07 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 140 4.6e-07 1
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 138 6.0e-07 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 141 6.2e-07 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 130 9.4e-07 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 133 1.0e-06 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 137 1.1e-06 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 132 2.1e-06 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 130 3.3e-06 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 130 3.8e-06 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 127 8.6e-06 1
TAIR|locus:2204898 - symbol:HFR1 "AT1G02340" species:3702... 124 1.7e-05 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 127 1.9e-05 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 123 2.5e-05 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 123 2.7e-05 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 124 2.8e-05 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 119 3.0e-05 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 123 4.0e-05 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 119 6.6e-05 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 120 7.6e-05 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 120 8.7e-05 1
RGD|3092 - symbol:Mitf "microphthalmia-associated transcr... 98 0.00011 1
UNIPROTKB|O88368 - symbol:Mitf "Microphthalmia-associated... 98 0.00011 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 117 0.00011 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 117 0.00012 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 116 0.00015 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 118 0.00017 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 120 0.00017 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 111 0.00024 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 118 0.00031 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 114 0.00036 1
ZFIN|ZDB-GENE-010919-1 - symbol:mitfb "microphthalmia-ass... 115 0.00049 1
WARNING: Descriptions of 5 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 141/214 (65%), Positives = 164/214 (76%)
Query: 64 GNGVRKRRD---VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPS 120
G G R++R+ +ED+S++ VSTS G G G + DS+ KR K S S DN + EAE
Sbjct: 52 GAGRRRQREAPALEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETD 111
Query: 121 S---VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 177
S K +QN PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG
Sbjct: 112 SRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 171
Query: 178 CNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA- 234
CNKVIGKA VLDEIINYIQ+LQRQ FLSMKLEAVN +N GIE FPPKDF Q ++TA
Sbjct: 172 CNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAP 231
Query: 235 GMPFVSQATREYSRGTSP-DWLHMQIGGGFERMT 267
G+ F Q REY++G++P +WLHMQIGG +ER+T
Sbjct: 232 GLTFDPQTPREYAQGSTPSEWLHMQIGGTYERVT 265
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 134/230 (58%), Positives = 162/230 (70%)
Query: 64 GNGVRK-RRDV---EDESAKHVSTSS---GNGNGNRVNDS-DGKRIKTSGSRDDNHHSKA 115
G+G R+ R D +D+ +K VSTS+ G G G + +D+ + KR+K S D N +
Sbjct: 39 GSGRRRPRSDAGPEDDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDSLRT 98
Query: 116 EA---EPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 172
EA +S K A++N+ PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ
Sbjct: 99 EAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 158
Query: 173 DLVPGCNKVIGKALVLDEIINYIQSLQRQ--------------FLSMKLEAVNTRMNPGI 218
DLVPGCNKVIGKA VLDEIINYIQSLQ Q FLSMKLEAVN+ M GI
Sbjct: 159 DLVPGCNKVIGKASVLDEIINYIQSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHMINGI 218
Query: 219 EVFPPKDFTQQTFDTA-GMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
FP KDF Q ++TA G+ F Q TRE+++G++ +WLHMQIG +ER+T
Sbjct: 219 VAFPSKDFGAQPYNTAAGLTFDPQTTREFAQGSTSEWLHMQIGNAYERVT 268
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 135/275 (49%), Positives = 164/275 (59%)
Query: 5 SYNFAEIWQFPVPXXXXXXXXXXXXXQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHG 64
SY +EIW FPV G F + S+ N++VS + + A G
Sbjct: 18 SYTLSEIWPFPV--NDAVRSGLRLAVNSGRVFTR--SEHSGNKDVSAAEESTVTDLTA-G 72
Query: 65 NGVRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHS--KAEAEPS 120
G RK RD+ ED+S+K VS+SS +GN + +S K+ K GS N + E E S
Sbjct: 73 WGSRKTRDLNSEDDSSKMVSSSS---SGNELKESGDKKRKLCGSESGNGDGSMRPEGETS 129
Query: 121 S----VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
S K EQ ++P EPPK DYIHVRARRGQATD HSLAERARREKISE+M LQD++P
Sbjct: 130 SGGGGSKATEQKNKP-EPPK-DYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIP 187
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPG--IEVFPPKDFTQQTFD 232
GCNK+IGKALVLDEIINYIQSLQRQ FLSMKLE VN+ + G I VFP D D
Sbjct: 188 GCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFPSGDLGTLPID 247
Query: 233 TAGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
+ Q E +R + P+WLHMQ+ G F R T
Sbjct: 248 VHRTIYEQQEANE-TRVSQPEWLHMQVDGNFNRTT 281
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 127/229 (55%), Positives = 144/229 (62%)
Query: 4 GSYNFAEIWQFPVPXXXXXXXXXXXXXQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAH 63
G +N AEIWQFP+ FG + T + DP + H ++
Sbjct: 11 GPFNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGD--ADLTT---AANGDPARMSHALSQ 65
Query: 64 G-----NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAE 118
+G KRR+ E +SAK VST + + + KR K D+ KAEAE
Sbjct: 66 AVIEGISGAWKRREDESKSAKIVSTIGAS-------EGENKRQKI----DEVCDGKAEAE 114
Query: 119 PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
+ EQ Q EP K DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC
Sbjct: 115 SLGTE-TEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 172
Query: 179 NKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
NKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMNPGIEVFPPK+
Sbjct: 173 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKE 221
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 106/223 (47%), Positives = 133/223 (59%)
Query: 44 GTNREVSG-DDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVND---SDGK 99
G +RE S DP + K A N +KR+ +A + + G G V + SDGK
Sbjct: 96 GGSREASSVSDPASSAMKDAAANA-KKRKS----TAAAAAAAKGKGKEPPVGEEKESDGK 150
Query: 100 RIKT-SGSRDDNHHSKAE--AEPSSVKPAE---------QNSQPPEPPKQDYIHVRARRG 147
R KT +G ++ + KAE SSV+ +N++P EPPK DY+HVRARRG
Sbjct: 151 RCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPK-DYVHVRARRG 209
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
QATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQ FLSM
Sbjct: 210 QATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSM 269
Query: 206 KLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSR 248
KL VN + KD Q +A F +++ R
Sbjct: 270 KLATVNPLDFSNLPTLLQKDMFQACGPSASSVFSLESSNSAFR 312
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 91/173 (52%), Positives = 116/173 (67%)
Query: 64 GNGVRKRRDVEDESAKH--VSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS 121
G RKR+ V +K +ST+S + + ++ + +G + + S + + E E
Sbjct: 216 GEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDE 275
Query: 122 VKPAE------QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 175
+ E N++PPEPPK DYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLV
Sbjct: 276 EEEGEGEGNKSNNTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLV 334
Query: 176 PGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN-TRMNPGIEVFPPKD 225
PGCNKV GKAL+LDEIINY+QSLQRQ FLSMKL +VN TR++ ++ KD
Sbjct: 335 PGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKD 387
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 93/197 (47%), Positives = 117/197 (59%)
Query: 36 FGQHLSQFGTNRE--VSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRV 93
FG TN ++ + P+ KM + V A HV +G +R
Sbjct: 151 FGSRSFNSRTNSPFPINNEPPITTNEKMPRVSS----SPVFKPLASHVPAGESSGELSRK 206
Query: 94 NDSDGKRIKTSG-SRDDNHHSKAEAEPSSVKPAEQNSQPPEP--PKQDYIHVRARRGQAT 150
+ K+ S S K +++P K +E+N + P +DYIHVRARRGQAT
Sbjct: 207 RKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQAT 266
Query: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLE 208
DSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ FLSMKL
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 326
Query: 209 AVNTRMNPGIEVFPPKD 225
+VNTR++ ++ KD
Sbjct: 327 SVNTRLDFNMDALLSKD 343
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 99/201 (49%), Positives = 119/201 (59%)
Query: 33 GAHFGQHLSQFGTNREVSGDDPVNLEHK---MAHGNGVRKR-RDVEDESAKHVSTSSGNG 88
G F + QFG++RE G P E + + V R + S K S SGNG
Sbjct: 67 GIRFPPYPGQFGSDREF-GSQPTTQESNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNG 125
Query: 89 NGNRVNDS-DGKRIKTSGSRDDNH---HSKAEAEPSSVKPAEQ---------NSQPPEPP 135
+ + S K SG + SK + SS E+ +++PPE P
Sbjct: 126 KESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAP 185
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAERARREKISERM +LQDLVPGCN++ GKA++LDEIINY+
Sbjct: 186 K-DYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYV 244
Query: 196 QSLQRQ--FLSMKLEAVNTRM 214
QSLQRQ FLSMKL VN RM
Sbjct: 245 QSLQRQVEFLSMKLATVNPRM 265
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 94/191 (49%), Positives = 118/191 (61%)
Query: 42 QFGTNREVSG-DDPV----NLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDS 96
+ G R+ S DP + K A RKR+ S K S DS
Sbjct: 167 ELGNTRDESSVSDPAPGGAEIPPKGASDGNARKRK----ASGKGKGKDSPMSTSAAKEDS 222
Query: 97 DGKRIKT---SGSRDDNHHSKAEAEPSSVKPA-------EQNSQPPEPPKQDYIHVRARR 146
GKR K+ S + + + K +A S+ + + +S+PPEPPK DYIHVRARR
Sbjct: 223 SGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPK-DYIHVRARR 281
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLS 204
G+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQ FLS
Sbjct: 282 GEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 341
Query: 205 MKLEAVNTRMN 215
MKL VN +++
Sbjct: 342 MKLATVNPQLD 352
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 90/204 (44%), Positives = 117/204 (57%)
Query: 49 VSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRD 108
V G V+ + + + GNG +K R+ + K N + + S + + D
Sbjct: 208 VPGSGNVSEDTQSSGGNG-QKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGD 266
Query: 109 DNHHSKAEAEPSSVKP---AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 165
+ + + K +Q Q +PPK YIHVRARRGQAT+SHSLAER RREKIS
Sbjct: 267 EKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKIS 326
Query: 166 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPP 223
ERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQ FLSMKL VN +M+ +E
Sbjct: 327 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLA 386
Query: 224 KDFTQ-QTFDTAGMPFVSQATREY 246
KD Q + ++ PF + Y
Sbjct: 387 KDALQLRAGSSSTTPFPPNMSMAY 410
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 97/213 (45%), Positives = 124/213 (58%)
Query: 38 QHLSQFGTNREVSGD-----DPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNR 92
+++SQ G ++ G+ D + E M NG + S SG G +
Sbjct: 147 KNVSQTGEKQQGDGETTHAVDSSSKELSMPGRNGGAGHDEGTRVSCSKKRKRSGQDGGVK 206
Query: 93 VNDSDGKRIKTSGSRDDNHHS-KAEAEPSSVKPAEQNSQPPEP----PKQDYIHVRARRG 147
+ G+++ T GS N K E + SSV + + + + PK+DYIHVRARRG
Sbjct: 207 -HAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARRG 265
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
QAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSM
Sbjct: 266 QATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 325
Query: 206 KLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
KL +VN ++ IE KD Q TA F
Sbjct: 326 KLASVNPTLDFNIERILSKDIFQCRGTTASSAF 358
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 90/167 (53%), Positives = 110/167 (65%)
Query: 104 SGSRDDNHHSKAEAEPSSVKPAEQNS---------QPPEPPKQDYIHVRARRGQATDSHS 154
S S +++ HSK + E SS PA N + E K++YIHVRARRGQAT+SHS
Sbjct: 203 SDSANESVHSKDKGEESS--PATTNGGKSKGKGAKETSESQKEEYIHVRARRGQATNSHS 260
Query: 155 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
LAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN
Sbjct: 261 LAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 320
Query: 213 RMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
R++ IE KD + F G+P S G SP+ +H Q+
Sbjct: 321 RLDLNIEGLLSKDLLR--FP--GVP-------SSSIGFSPEMMHPQL 356
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 82/180 (45%), Positives = 120/180 (66%)
Query: 44 GTNREVSGDDPVNLEHKMAHGNGVRKRRDVEDESAK-HVSTSSGNGN-GNRVNDSDGKRI 101
G R +G N++ H +G ++R+ ++D A + S SS N G++ + ++
Sbjct: 54 GLYRSPNGTFCQNIQLSDDHSSGAKRRKGIDDHIALLNPSASSRIQNVGDQQTEVSSQQE 113
Query: 102 KTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARR 161
+ S +DN S ++ + ++++S + K+DY+HVRA+RGQAT+SHSLAER RR
Sbjct: 114 RIS-MEEDNQKSCSKMQ------SKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRR 166
Query: 162 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+QSLQRQ FLSMKL VN ++ IE
Sbjct: 167 KKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELSFDIE 226
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 76/137 (55%), Positives = 98/137 (71%)
Query: 108 DDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISER 167
+D K + + S +++SQ E PK++YIH+RARRGQAT+SHSLAER RREKISER
Sbjct: 172 NDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISER 231
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
M++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+Q FLSMKL VN +N I+ KD
Sbjct: 232 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKD 291
Query: 226 FTQ---QTFDTAGM-PF 238
Q + T G+ PF
Sbjct: 292 LLQSRDRNTPTLGLNPF 308
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 79/157 (50%), Positives = 96/157 (61%)
Query: 80 HVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS-VKPAEQNSQPPEPPKQD 138
H G + + KRI +++ K E P+S QP + K
Sbjct: 160 HDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDG 219
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
YIH+RARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSL
Sbjct: 220 YIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSL 279
Query: 199 QRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDT 233
Q Q FLSMKL AVN ++ +E KD Q + T
Sbjct: 280 QCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAPT 316
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 86/188 (45%), Positives = 111/188 (59%)
Query: 37 GQHLSQFGTNREVSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVND- 95
G +L V GD +++ + G G K+R + E+ K + NR +D
Sbjct: 60 GLNLPMMYGETTVEGDSRLSISPETTLGTGNFKKRKFDTET-KDCNEKKKKMTMNR-DDL 117
Query: 96 -SDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNS-------QPPEPPKQDYIHVRARRG 147
+G+ K+ + +N +K+ + E+N+ E K DYIHVRARRG
Sbjct: 118 VEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRG 177
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
QATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QSLQRQ FLSM
Sbjct: 178 QATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSM 237
Query: 206 KLEAVNTR 213
KL VN R
Sbjct: 238 KLAIVNPR 245
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 83/162 (51%), Positives = 98/162 (60%)
Query: 64 GNGVRKRRDVEDESAKHVSTS-SGNGNGNRVNDSDGKRIKTSGSRDDNHH---SKAEAEP 119
G V D ES K S +G + N N +T S+D N A A
Sbjct: 94 GGIVEPAGDCSSESKKRRSDEIAGTDHANASNALADSGNETECSKDVNGEVIGPPATAAA 153
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
+ E K+ Y HVRAR+GQAT++HSLAER RREKISERMK+LQDLVPGC+
Sbjct: 154 GGKSKGKGAKDAGEAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCS 213
Query: 180 KVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
KV GKAL+LDEIINY+QSLQRQ FLSMKL AVN R++ IE
Sbjct: 214 KVTGKALMLDEIINYVQSLQRQVEFLSMKLSAVNPRIDLDIE 255
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 81/167 (48%), Positives = 104/167 (62%)
Query: 77 SAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAE--AEPSSV-KPAEQNSQPP- 132
S+ H+ NG+ + + ++ + + + KAE EPS K N++
Sbjct: 72 SSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS 131
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEII
Sbjct: 132 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
NY+QSLQ+Q FLSMKL +N + I+ K F Q + T G P
Sbjct: 192 NYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF--QAYFT-GPP 235
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 76/130 (58%), Positives = 91/130 (70%)
Query: 113 SKAEAEPSSVK--PAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 170
+K +AE +S K PA S K DYIHVRARRGQATDSHSLAER RRE+ISERM+
Sbjct: 133 AKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRY 192
Query: 171 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGI-EVFPPKDFT 227
LQ+LVPGCNKV GKA +LDEIINY+QSLQ+Q FLSMK+ A N +N I E + +
Sbjct: 193 LQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLS 252
Query: 228 QQTFDTAGMP 237
Q + A +P
Sbjct: 253 QAACNPAALP 262
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 72/113 (63%), Positives = 87/113 (76%)
Query: 102 KTSGSRDDN-HHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERAR 160
KT G + N ++SK E K ++ S+ EPP DYIHVRARRGQATDSHSLAER R
Sbjct: 97 KTRGRKARNSNNSKEGVEGRKSKKQKRGSKE-EPPT-DYIHVRARRGQATDSHSLAERVR 154
Query: 161 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
REKISERM+ LQ+LVPGC+KV GKAL+LDEIINY+Q+LQ Q FLSMKL +++
Sbjct: 155 REKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSIS 207
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 335 (123.0 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 69/130 (53%), Positives = 95/130 (73%)
Query: 98 GKRIKTSGSRDDNHHSKAEAE--PS---SVKPAEQNSQPPEPPKQDYIHVRARRGQATDS 152
G + K SG + HS+ E P S++ A + + + +++Y+HVRA+RGQAT+S
Sbjct: 579 GSKRKGSGEGSSSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNS 638
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQ FLSMKL +
Sbjct: 639 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTI 698
Query: 211 NTRMNPGIEV 220
+ +N +++
Sbjct: 699 SPELNSDLDL 708
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 70/106 (66%), Positives = 82/106 (77%)
Query: 122 VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
VK + + EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV
Sbjct: 161 VKKKAKEAAGGEPPA-GYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKV 219
Query: 182 IGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRM---NPGIEVFP 222
GKAL+LDEII+Y+QSLQ Q FLSMKL +++ M PGI++ P
Sbjct: 220 TGKALMLDEIISYVQSLQNQVEFLSMKLASLSPLMYEFGPGIDMHP 265
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 71/144 (49%), Positives = 99/144 (68%)
Query: 76 ESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHS-KAEAEPSSVKPA-EQNSQPPE 133
E+A + ++ G N +RV + +++ ++ S K + VK + ++N E
Sbjct: 118 ETANSLPSNPG-ANLDRVKAEPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKNKSSVE 176
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
K Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN
Sbjct: 177 SDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIIN 236
Query: 194 YIQSLQRQ--FLSMKLEAVNTRMN 215
++Q+LQRQ LSM+L AVN R++
Sbjct: 237 HVQTLQRQVEMLSMRLAAVNPRID 260
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 219 (82.2 bits), Expect = 9.6e-27, Sum P(2) = 9.6e-27
Identities = 55/136 (40%), Positives = 78/136 (57%)
Query: 46 NREVSGDDPVNLEHKMAHGNGVR-KRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTS 104
N +SG+ P + + N R K E +S++ + + S N + + + +
Sbjct: 118 NGNISGETPTSSVPSNSSANLDRVKTEPAETDSSQRLISDSAIENQIPCPNQNNR----N 173
Query: 105 GSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 164
G R D K ++ K +E+N + P Y+HVRARRGQATDSHSLAERARREKI
Sbjct: 174 GKRKD-FEKKGKSSTKKNKSSEENEKLP------YVHVRARRGQATDSHSLAERARREKI 226
Query: 165 SERMKILQDLVPGCNK 180
+ RMK+LQ+LVPGC+K
Sbjct: 227 NARMKLLQELVPGCDK 242
Score = 108 (43.1 bits), Expect = 9.6e-27, Sum P(2) = 9.6e-27
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 180 KVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN 215
++ G ALVLDEIIN++QSLQRQ LSM+L AVN R++
Sbjct: 289 RIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRID 326
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 70/154 (45%), Positives = 97/154 (62%)
Query: 102 KTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARR 161
+ G+++++ SK + S + A N + PK D +HVRA+RGQATDSHSLAER RR
Sbjct: 67 RRKGNKEESG-SKRRRKRSEEEEA-MNGDETQKPK-DVVHVRAKRGQATDSHSLAERVRR 123
Query: 162 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN-PGI 218
EKI+ER+K LQDLVPGC K +G A++LD II+Y++SLQ Q FLSMKL A + + +
Sbjct: 124 EKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSL 183
Query: 219 EVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSP 252
++ P F +A + + RE S GT P
Sbjct: 184 DIEPTDIFQGGNIHSAAE--MERILRE-SVGTQP 214
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 59/121 (48%), Positives = 82/121 (67%)
Query: 94 NDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSH 153
N + + TS S + + + +S + +++ E +++ +HVRARRGQATDSH
Sbjct: 100 NSVSDQTLSTS-SAQVSINGNISTKNNSSRRGKRSKNREEEKEREVVHVRARRGQATDSH 158
Query: 154 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
S+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ Q FLSMKL A +
Sbjct: 159 SIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAAS 218
Query: 212 T 212
+
Sbjct: 219 S 219
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 70/151 (46%), Positives = 94/151 (62%)
Query: 75 DESAKHVSTSSGNGNGNRVNDSDGKR---IKTSGSRD-----DNHHSKAEAEPSSV---K 123
D S STSS + + + D KR + T S + DN + A E S+ K
Sbjct: 68 DSSNNFSSTSSFLHSDHNIVDETKKRKALLPTLSSSETSGVSDNTNVIA-TETGSLRRGK 126
Query: 124 PAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 183
++ + + +++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G
Sbjct: 127 RLKKKKEEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMG 186
Query: 184 KALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
A +LDEIINY+QSLQ Q FLSMKL A ++
Sbjct: 187 MATMLDEIINYVQSLQNQVEFLSMKLTAASS 217
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 189 (71.6 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 51/122 (41%), Positives = 72/122 (59%)
Query: 86 GNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRAR 145
G+G+G R +D D + S + H + P S P + S P VRAR
Sbjct: 100 GHGSGKRFSD-DVVDNRCSSMKPVFHGQPMQQPPPSA-PHQPTSIRPR--------VRAR 149
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF--L 203
RGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q L
Sbjct: 150 RGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVL 208
Query: 204 SM 205
SM
Sbjct: 209 SM 210
Score = 38 (18.4 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 37 GQHLSQFGTNREVS-GDDPVNLEHKMAHGNGVRKRRDVED 75
G H F + G P L + HG+G R DV D
Sbjct: 74 GFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVD 113
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 59/134 (44%), Positives = 81/134 (60%)
Query: 81 VSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKP---AEQNSQP--PEPP 135
+S G G+G D GKR + DD ++ SS+KP + SQP P P
Sbjct: 85 LSLDQGKGHGFLKPDETGKRFQ-----DDVLDNRC----SSMKPIFHGQPMSQPAPPMPH 135
Query: 136 KQDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
+Q I VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++
Sbjct: 136 QQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVD 194
Query: 194 YIQSLQRQF--LSM 205
Y++ L+ Q LSM
Sbjct: 195 YVKFLRLQVKVLSM 208
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 210 (79.0 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 45/72 (62%), Positives = 56/72 (77%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI--GKALVLD 189
P PP+Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK++ KA +LD
Sbjct: 243 PAPPRQ---RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLD 299
Query: 190 EIINYIQSLQRQ 201
EII+Y++ LQ Q
Sbjct: 300 EIIDYVKFLQLQ 311
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 51/105 (48%), Positives = 63/105 (60%)
Query: 108 DDNHHSKAEAEPS-----SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARRE 162
D HH + P+ ++P S P + VRARRGQATD HS+AER RRE
Sbjct: 60 DQFHHPQESGGPTMGSQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRE 119
Query: 163 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF--LSM 205
+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q LSM
Sbjct: 120 RIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQVKVLSM 163
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 204 (76.9 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 48/103 (46%), Positives = 63/103 (61%)
Query: 105 GSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 164
G + ++ + +P + PP Q +RARRGQATD HS+AER RRE+I
Sbjct: 102 GLMNQQGQTQTQTQPQASASTATGGTVAAPP-QSRTKIRARRGQATDPHSIAERLRRERI 160
Query: 165 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF--LSM 205
+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q LSM
Sbjct: 161 AERMKALQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 202
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 204 (76.9 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 64/156 (41%), Positives = 85/156 (54%)
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
NH S E + +S N++P RARRGQATD HS+AER RREKISERMK
Sbjct: 216 NHSSDVEPQANSAPGNSANAKP---------RTRARRGQATDPHSIAERLRREKISERMK 266
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNTRMNPGIEVFPPKDFTQQ 229
LQ LVP NK KA +LDEII+Y++ LQ L +K+ +++ PG + P Q
Sbjct: 267 NLQVLVPNSNKA-DKASMLDEIIDYVKFLQ---LQVKVLSMSRLGAPGAVL--PLLRESQ 320
Query: 230 TFDTAGMPFVSQATREYSRGTSPDWLHMQIGGGFER 265
T + P +S +T S+G PD + FE+
Sbjct: 321 T-ECHSNPSLSAST--ISQGP-PDMPDSEDSSAFEQ 352
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 198 (74.8 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 48/79 (60%), Positives = 57/79 (72%)
Query: 129 SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
+QP PK VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +L
Sbjct: 122 AQPQTKPK-----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASML 175
Query: 189 DEIINYIQSLQRQF--LSM 205
DEII+Y++ LQ Q LSM
Sbjct: 176 DEIIDYVKFLQLQVKVLSM 194
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 46/79 (58%), Positives = 58/79 (73%)
Query: 130 QPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
QPP P PK VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +L
Sbjct: 125 QPPAPRPK-----VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAML 178
Query: 189 DEIINYIQSLQRQF--LSM 205
DEI++Y++ L+ Q LSM
Sbjct: 179 DEILDYVKFLRLQVKVLSM 197
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 198 (74.8 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 45/66 (68%), Positives = 52/66 (78%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQ 372
Query: 202 F--LSM 205
LSM
Sbjct: 373 VKVLSM 378
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 189 (71.6 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 52/154 (33%), Positives = 83/154 (53%)
Query: 70 RRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNS 129
R+D E E A V +S G+GN DG S S H + + + S E++
Sbjct: 271 RKDQESEKAV-VCSSVGSGNS-----LDGPSESPSLSLKRKHSNIQDIDCHSEDVEEESG 324
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
+ + ++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LD
Sbjct: 325 DGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLD 383
Query: 190 EIINYIQSLQRQFLSMKLEAVNTRMNPGIEVFPP 223
E I Y++SLQ Q M + A + P + +FPP
Sbjct: 384 EAIEYLKSLQLQVQIMSM-ASGYYLPPAV-MFPP 415
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 185 (70.2 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 63/206 (30%), Positives = 98/206 (47%)
Query: 32 KGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGN 91
+G G LS+ RE + P A +G+ +R D D SA + N G
Sbjct: 159 RGGESGPLLSK-AVVRESTQVSPSATPSAAASESGLTRRTDGTDSSAV-AGGGAYNRKGK 216
Query: 92 RVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRA------- 144
V + I+ +G+ + SK+E EP ++ + E D R+
Sbjct: 217 AVAMT-APAIEITGT-SSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQAR 274
Query: 145 ------RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SL
Sbjct: 275 VSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSL 333
Query: 199 QRQFLSMKLEA-VNTRMNPGIEVFPP 223
Q Q M + + M PG++ + P
Sbjct: 334 QLQIQMMSMGCGMMPMMYPGMQQYMP 359
>UNIPROTKB|Q69WX7 [details] [associations]
symbol:P0417G12.19 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AP003626 EMBL:AP003711 EMBL:AK070970
EnsemblPlants:LOC_Os06g41060.1 OMA:KNGMDLE Uniprot:Q69WX7
Length = 154
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPG 217
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQ +LSM+L AVN R++ G
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFG 52
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 172 (65.6 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 54/170 (31%), Positives = 83/170 (48%)
Query: 74 EDESAKHVSTS-SGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPP 132
EDE A +ST +G+G G G + G D K + EP + K ++ P
Sbjct: 84 EDEMAAWLSTIVTGSGGGG------GDDVAAGGDHQDPAVKKPDGEPLTEKMDKK--LPT 135
Query: 133 EPPKQDYIHVRARRGQA-TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
++ + +ARR ++H L E+ RR +I+E+ K+LQ LVPGC+K ++ LD
Sbjct: 136 RTEERRRVKHKARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKC-SQSSTLDRT 194
Query: 192 INYIQSLQRQFLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQ 241
I+Y++SLQ+Q +M T + P V+P F G P SQ
Sbjct: 195 IHYMKSLQQQLQAM----YPTMVRPAA-VYPVVQ-PPPAFAAGGPPAASQ 238
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 174 (66.3 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 61/201 (30%), Positives = 102/201 (50%)
Query: 51 GDDPV--NLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNG----NRVND-SDGKRIKT 103
G +P +L+ M+H + +++E++ + S+SSG +G + + + G+ I T
Sbjct: 167 GSNPSQNDLDVSMSHD----RSKNIEEKLNPNASSSSGGSSGCSFGKDIKEMASGRCITT 222
Query: 104 SGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREK 163
R +H+ E S+ A N K + RR +A + H+L+ER RR++
Sbjct: 223 DRKRKRINHTD---ESVSLSDAIGN-------KSNQRSGSNRRSRAAEVHNLSERRRRDR 272
Query: 164 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL-------EAVNTRMNP 216
I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q M + A M P
Sbjct: 273 INERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMMFP 331
Query: 217 GIEVFPPKDFTQQTFDTAGMP 237
G++ P+ F +Q +P
Sbjct: 332 GVQ---PQQFIRQIQSPVQLP 349
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 174 (66.3 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 40/102 (39%), Positives = 55/102 (53%)
Query: 114 KAEAEPSSVKPAEQNSQPPEPPKQDYIHVRA----RRGQATDSHSLAERARREKISERMK 169
KAE EP ++PA ++ R +R + + H+LAER RREKI+E+MK
Sbjct: 217 KAETEPVQIQPATESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMK 276
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVN 211
LQ L+P CNK K LD+ I Y++SLQ Q M +N
Sbjct: 277 TLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQGMMSPMMN 317
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 165 (63.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 53/178 (29%), Positives = 84/178 (47%)
Query: 64 GNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEP---- 119
G+G R + + A S ++G G G+ + + R + G D A E
Sbjct: 75 GDGYRDQYYTQLLPAAAYSNAAGGGRGSEYHTTTTTRPASGGGGDGGVGPAAMREMIFHI 134
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
++++P + + PPK+ + + +TD S+A R RRE+ISER++ILQ LVPG
Sbjct: 135 AALQPVNIDPETVRPPKRRNVRI------STDPQSVAARMRRERISERIRILQRLVPGGT 188
Query: 180 KVIGKALVLDEIINYIQSLQRQFLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
K+ A +LDE I+Y++ L+ Q S++ A P PP T T P
Sbjct: 189 KM-DTASMLDEAIHYVKFLKTQVQSLERAAAANGHRP-----PPPTATSAAAATVAYP 240
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 152 (58.6 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 30/46 (65%), Positives = 40/46 (86%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
M++LQ LVPGC+KV GKAL+LDEIINY+QSLQ Q FLSM++ +++
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMS 46
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 169 (64.5 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 53/182 (29%), Positives = 90/182 (49%)
Query: 85 SGNGNGNRVN-DSDGKRIKTS-----GSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQD 138
SG GN N V +S G R+ +S G+ D + ++E +V E S P +
Sbjct: 133 SGGGNNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVD-EAPSSKSGPSSRS 191
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
++R +A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ L
Sbjct: 192 ----SSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQL 246
Query: 199 QRQ--FLSMKLEAVNTR--MNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDW 254
Q Q L+M+ +N PG + P + + + P ++ + S +P+
Sbjct: 247 QLQVQMLTMR-NGINLHPLCLPGTTLHPLQLSQIRPPEATNDPLLNHTNQFASTSNAPEM 305
Query: 255 LH 256
++
Sbjct: 306 IN 307
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 167 (63.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 43/109 (39%), Positives = 64/109 (58%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA +LDE I Y++SLQ Q
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 283
Query: 205 MKLEA-VNTRMNPGI-EVFPPKDFTQQTFDTAGMPFV-SQATREYSRGT 250
M + + M PG ++ PP +TA MP +Q + R T
Sbjct: 284 MWMTTGIVPMMFPGTHQLMPPMGMG---LNTACMPGAQAQGLNQMQRTT 329
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 166 (63.5 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 43/132 (32%), Positives = 71/132 (53%)
Query: 79 KHVSTSSGNGNGNRVNDSDGKRIK-TSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPP-- 135
+ + TSSG +G ++ + + TS + D +A+ SV ++ +
Sbjct: 182 ERLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTM 241
Query: 136 --KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
K RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+
Sbjct: 242 GNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAID 300
Query: 194 YIQSLQRQFLSM 205
Y++SLQ Q M
Sbjct: 301 YLKSLQMQLQVM 312
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 162 (62.1 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 43/111 (38%), Positives = 59/111 (53%)
Query: 118 EPSSVKPAEQNSQPPEPPK-QDYIHVRA----RRGQATDSHSLAERARREKISERMKILQ 172
+P S P Q P P+ Q R +R +A + H+LAER RREKI+ERMK LQ
Sbjct: 115 KPPSSAPYGQIIAPRSAPRIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQ 174
Query: 173 DLVPGCNKVIGKALVLDEIINYIQSLQRQFLS-MKLEAVNTRMNPGIEVFP 222
L+P CNK K +L+++I Y++SL+ Q M A+ P FP
Sbjct: 175 QLIPRCNKST-KVSMLEDVIEYVKSLEMQINQFMPHMAMGMNQPPAYIPFP 224
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 166 (63.5 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 55/161 (34%), Positives = 84/161 (52%)
Query: 55 VNLEHKMAHGNGVRKRRDVEDESAKH----VSTSS---GNGNGNRVNDSDGKRIKTSGSR 107
VNL H+M R + E+ K V+TSS GNG G SD R
Sbjct: 225 VNLHHEMGRDRAGRTMPVHKTEARKAPEATVATSSVCSGNGAG-----SDELW------R 273
Query: 108 DDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRA-RRGQATDSHSLAERARREKISE 166
+A+AE S+ + + + +P K R+ +R + + H+L+ER RR++I+E
Sbjct: 274 QQKRKCQAQAECSASQDDDLDDEPGVLRKSG---TRSTKRSRTAEVHNLSERRRRDRINE 330
Query: 167 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
+M+ LQ+L+P CNK I KA +LDE I Y+++LQ Q M +
Sbjct: 331 KMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSM 370
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 165 (63.1 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 40/129 (31%), Positives = 71/129 (55%)
Query: 79 KHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQD 138
K V+T + + + VN ++ +R++ R E + + K E+ + ++
Sbjct: 296 KEVATETAGTSYSGVNKAETERVQIQPER--------ETKITEDKKREETIAEIQGTEEA 347
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
+ +R +A D H+L+ER RRE+I+ERMK LQ+L+P C K K +L+++I Y++SL
Sbjct: 348 HGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKT-DKVSMLEDVIEYVKSL 406
Query: 199 QRQFLSMKL 207
Q Q M +
Sbjct: 407 QLQIQMMSM 415
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 144 (55.7 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 142 (55.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ L
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQ---LQ 65
Query: 205 MKLEAVNTRMNPGIEVFPPK 224
+++ + M P V PP+
Sbjct: 66 LQMLVMGKGMAP---VVPPE 82
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 157 (60.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/154 (30%), Positives = 84/154 (54%)
Query: 73 VEDESAK--HVSTSSGNG-NGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNS 129
V++ES + H T+S +G N + + G+ +KT+ + D ++ ++ +E + EQ +
Sbjct: 95 VQEESHRVGHSVTASASGTNMSWASFESGRSLKTARTGDRDYF-RSGSETQDTEGDEQET 153
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
+ E + + RRG+A H+ +ER RR++I++RM+ LQ L+P +K K +LD
Sbjct: 154 RG-EAGRSN-----GRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKA-DKVSILD 206
Query: 190 EIINYIQSLQRQFLSMKLEAVNTRMNPGIEVFPP 223
++I +++ LQ Q M L A N I PP
Sbjct: 207 DVIEHLKQLQAQVQFMSLRA-NLPQQMMIPQLPP 239
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 122 (48.0 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 160 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF--LSM 205
RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q LSM
Sbjct: 252 RRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 298
Score = 79 (32.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 117 AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAER 158
A ++ A PP+Q RARRGQATD HS+AER
Sbjct: 190 ASAAAAAGASSGGGAAAPPRQ---RQRARRGQATDPHSIAER 228
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 144 (55.7 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y+++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 202 FLSMKLEAVNTRMNP 216
+ + + P
Sbjct: 241 IQELTEQQKRCKCKP 255
Score = 38 (18.4 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 82 STSSGNGNGNRVNDSDGKRIKTS 104
S+ G G G V+ S RI+++
Sbjct: 10 SSGGGGGGGGEVSRSGLSRIRSA 32
Score = 37 (18.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 17/55 (30%), Positives = 21/55 (38%)
Query: 63 HGNGVRKRRDVEDESAKHVSTSSGN---GNG-NRVNDSDGKRIKTSGSRDDNHHS 113
+ GV RD E V N G G +R N S + SGS D + S
Sbjct: 64 NSGGVITSRDDSFEFLSSVEQGLYNHHQGGGFHRQNSSPADFLSGSGSGTDGYFS 118
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 153 (58.9 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 202 FLSMKLEAVNTR-MN 215
+ + N + MN
Sbjct: 339 YKILNDNRANCKCMN 353
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 144 (55.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 50/157 (31%), Positives = 73/157 (46%)
Query: 59 HKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSK---- 114
H AH +G R +V S SSG + DS+ TS + H +
Sbjct: 43 HGAAHHHG-RSEENVSTHDHVVRSFSSGGFSIGSWEDSNSIVFSTSTGKSGAHGNDDIIA 101
Query: 115 --AEAEPSSVKPAEQNSQPPEPPKQ-DYI--HVRARRGQATDSHSLAERARREKISERMK 169
+ E V P E Q D + VRA+RG AT S+AER RR +ISE+++
Sbjct: 102 TLSNYESQLVAPREMAGVEKYLQMQHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLR 161
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK 206
LQ LVP +K + +LD +++I+ LQ Q ++K
Sbjct: 162 KLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLK 198
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 151 (58.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 46/143 (32%), Positives = 73/143 (51%)
Query: 69 KRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSG---SRDDNHHSKAEAEPSSVKPA 125
KR V + K+V S N G + + +G SR ++ + E S+
Sbjct: 183 KRARVNKRAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEEESNCADQ 242
Query: 126 E-----QNSQPPEPPKQDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
+ +S+ +P K ++ RA RG ATD SL R RRE+I+ER++ILQ+LVP
Sbjct: 243 DGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNG 302
Query: 179 NKVIGKALVLDEIINYIQSLQRQ 201
KV + +L+E ++Y++ LQ Q
Sbjct: 303 TKV-DISTMLEEAVHYVKFLQLQ 324
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 150 (57.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 40/96 (41%), Positives = 52/96 (54%)
Query: 111 HHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 170
HH P S+ EQ P K +RA+RG AT S+AER RR KISERM+
Sbjct: 281 HHMSL---PKSLSDIEQLLSDSIPCK-----IRAKRGCATHPRSIAERVRRTKISERMRK 332
Query: 171 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK 206
LQDLVP + A +LD + YI+ LQ Q +++
Sbjct: 333 LQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALE 368
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 146 (56.5 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQRQ
Sbjct: 184 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQ 243
Query: 202 FLSMKLE 208
+ E
Sbjct: 244 IQELTEE 250
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 149 (57.5 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 48/137 (35%), Positives = 67/137 (48%)
Query: 85 SGNGNGNRVNDS-DGKRIKTS-GSRD---DNHHSKAEAEPSSVKPAEQNSQPPEPPKQDY 139
SG G+ D+ D TS GS D D+H S + P E + K
Sbjct: 152 SGGGSQRLTMDTYDVGFTSTSMGSHDNTIDDHDSVCHSRPQM----EDEEEKKAGGKSS- 206
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ
Sbjct: 207 --VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQ 263
Query: 200 RQFLSMKLEAVNTRMNP 216
Q M + + M P
Sbjct: 264 AQVSMMSRMNMPSMMLP 280
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 142 (55.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
++++P E + + PPK+ + + + D S+A R RRE+ISER++ILQ LVPG
Sbjct: 125 AALQPVEIDPEAVRPPKRRNVRI------SKDPQSVAARLRRERISERIRILQRLVPGGT 178
Query: 180 KVIGKALVLDEIINYIQSLQRQFLSMKLEAVNT 212
K+ A +LDE I+Y++ L+ Q S++ A T
Sbjct: 179 KM-DTASMLDEAIHYVKFLKSQVQSLERAAAAT 210
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 142 (55.0 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 35/91 (38%), Positives = 58/91 (63%)
Query: 122 VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
++P + + +PPK+ + + + D S+A R RRE+ISER++ILQ LVPG K+
Sbjct: 108 MQPIHIDPEAVKPPKRRNVRI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM 161
Query: 182 IGKALVLDEIINYIQSLQRQFLSMKLEAVNT 212
A +LDE I+Y++ L++Q S++ +AV T
Sbjct: 162 -DTASMLDEAIHYVKFLKKQVQSLEEQAVVT 191
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 144 (55.7 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ-- 201
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 157
Query: 202 FLSMK 206
LSM+
Sbjct: 158 MLSMR 162
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 139 (54.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 122 VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
++P + + +PPK+ + + + D S+A R RRE+ISER++ILQ LVPG K+
Sbjct: 105 MQPIHIDPESVKPPKRKNVRI------SKDPQSVAARHRRERISERIRILQRLVPGGTKM 158
Query: 182 IGKALVLDEIINYIQSLQRQFLSMKLEAV 210
A +LDE I+Y++ L++Q S++ AV
Sbjct: 159 -DTASMLDEAIHYVKFLKKQVQSLEEHAV 186
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 141 (54.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+R A +H+L E+ RR KI+ER + LQ LVPGC+ +A LD+ I Y++SLQ Q
Sbjct: 78 SRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQ-- 135
Query: 204 SMKLEAVNTRMNPGIEVFPPKDFTQQTF 231
LEA + +P V P Q++
Sbjct: 136 ---LEATSAVGSPAAAVLYPAAVHPQSY 160
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 142 (55.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
+ ++ QP P + R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K K
Sbjct: 14 SSESEQPTRPARP-----RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DK 67
Query: 185 ALVLDEIINYIQSLQRQ--FLSMK 206
A +LD+ I Y++ LQ Q LSM+
Sbjct: 68 ASMLDDAIEYLKQLQLQVQMLSMR 91
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 136 (52.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 46/147 (31%), Positives = 75/147 (51%)
Query: 89 NGNRVNDSDGKR-IKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRG 147
+G++ +D D + ++ G+ + + A + + PA PK+ + +
Sbjct: 76 SGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKK-----PKRRNVRI----- 125
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
+ D S+A R RRE+ISER++ILQ LVPG K+ A +LDE I Y++ L+RQ ++L
Sbjct: 126 -SDDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQ---IRL 180
Query: 208 EAVNTRMNPGIEVFPPKDFTQQTFDTA 234
NT P PP+D Q T+
Sbjct: 181 LNNNTGYTPP----PPQDQASQAVTTS 203
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 141 (54.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 43/148 (29%), Positives = 69/148 (46%)
Query: 71 RDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRD------DNHHSKAEAEPSSVKP 124
++VE +A S+ G + + + SRD + E E S+
Sbjct: 143 KNVEVTTAPPDEQSAAVGRSTELYFASSSKFSRGTSRDLSCCSLKRKYGDIEEEESTY-- 200
Query: 125 AEQNSQPPEPPKQDYIHVRAR-----RGQATDSHSLAERARREKISERMKILQDLVPGCN 179
NS + +H R R R ++T+ H L ER RR++ +++M+ LQDL+P C
Sbjct: 201 LSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCY 260
Query: 180 KVIGKALVLDEIINYIQSLQRQFLSMKL 207
K KA +LDE I Y+++LQ Q M +
Sbjct: 261 KD-DKASLLDEAIKYMRTLQLQVQMMSM 287
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 140 (54.3 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 27/58 (46%), Positives = 42/58 (72%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
++R +A H L+ER RR+KI+E MK LQ+L+P C K ++ +LD++I Y++SLQ Q
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQ 329
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 138 (53.6 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 202 FLSMKLEAVN 211
++K + N
Sbjct: 343 LQNLKKDQEN 352
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 141 (54.7 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 55/190 (28%), Positives = 87/190 (45%)
Query: 44 GTNREVSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKT 103
G N S D + K+ +G+ V +S + V+ +G NG + S+ KR
Sbjct: 298 GGNDSTSNSDSQPIS-KLCNGSSVENPNPKVLKSCEMVNFKNGIENGQEEDSSNKKRSPV 356
Query: 104 SGSRD-----------DNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVR--ARRGQAT 150
S + + D++HS EA S K AE N EP K+ R A +
Sbjct: 357 SNNEEGMLSFTSVLPCDSNHSDLEA--SVAKEAESNRVVVEPEKKPRKRGRKPANGREEP 414
Query: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAV 210
+H AER RREK+++R L+ +VP +K+ KA +L + I+YI L+ + K E+
Sbjct: 415 LNHVEAERQRREKLNQRFYSLRAVVPNVSKM-DKASLLGDAISYISELKSKL--QKAESD 471
Query: 211 NTRMNPGIEV 220
+ I+V
Sbjct: 472 KEELQKQIDV 481
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 130 (50.8 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVN- 211
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q + L +N
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQT--LAVMNG 154
Query: 212 TRMNP-GIEVFPPKDFTQ 228
+NP + PP T+
Sbjct: 155 LGLNPMRLPQVPPPTHTR 172
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 133 (51.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/97 (37%), Positives = 60/97 (61%)
Query: 119 PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
P+S ++ +S+PP PP++ R ++D ++A R RRE++SER+++LQ LVPG
Sbjct: 279 PASA--SDPSSRPPPPPQRPR---RKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGG 333
Query: 179 NKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNTRMN 215
+K+ A +LDE +Y++ FL +LEA+ T N
Sbjct: 334 SKM-DTATMLDEAASYLK-----FLKSQLEALETLGN 364
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 274
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 130 (50.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/112 (30%), Positives = 61/112 (54%)
Query: 103 TSGSRDDNHHSKAEAEPSSVKPA--EQNSQPPEPPKQ-DYIHVRARRGQAT--DSHSLAE 157
+ GS D P S + ++ ++PP P Q +H +++ +A ++ S A
Sbjct: 145 SGGSGDSGMVMVTTTTPRSAAASGSQRRARPPPSPLQGSELHEYSKKQRANNKETQSSAA 204
Query: 158 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEA 209
++RRE+ISER++ LQ+LVP KV +LD I+Y++ +Q Q ++ +A
Sbjct: 205 KSRRERISERLRALQELVPSGGKV-DMVTMLDRAISYVKFMQMQLRVLETDA 255
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 130 (50.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 44/159 (27%), Positives = 74/159 (46%)
Query: 46 NREVSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSG 105
N + DD + + G +R ++++ T S + + GK+
Sbjct: 124 NGDPGFDDLADSSVNLLDSIGASNKRKIQEQGRLDDQTKSRK-SAKKAGSKRGKKAAQCE 182
Query: 106 SRDDNHHSKAEAEPSSVKPAEQNS-QPPEPPKQDYIHVRARRGQ--ATDSHSLAERARRE 162
+D + + S +E +S E P + +A+ G ATD SL R RRE
Sbjct: 183 G-EDGSIAVTNRQSLSCCTSENDSIGSQESPVAAKSNGKAQSGHRSATDPQSLYARKRRE 241
Query: 163 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+I+ER+KILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 242 RINERLKILQNLVPNGTKV-DISTMLEEAMHYVKFLQLQ 279
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 127 (49.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 46/165 (27%), Positives = 74/165 (44%)
Query: 52 DDPVNLEHKMAHGNGVRK-RRDVEDESAKHVSTSSGNGNGN-----RVNDSDGKRIKTSG 105
D P+ L + +G RD ++ + G G RV+D + SG
Sbjct: 123 DVPIGLNLLVGDNDGAGVVLRDAAPQAKRRTQAGHGGDLGRQKKKARVSDKRNQESMQSG 182
Query: 106 SRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 165
S DN + ++ V P ARR AT + SL R RRE+I+
Sbjct: 183 SCSDNESNCSQVNRRKVDRVAGGGNGKVP---------ARRRSATIAQSLYARRRRERIN 233
Query: 166 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAV 210
R++ILQ LVP KV + +L+E ++Y++ LQ Q + ++++ V
Sbjct: 234 GRLRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQ-IKVEVQIV 276
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 108 DDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATD--------SHSLAERA 159
DD+HH K +E S + +N E PK+ I V + ++ + + ++R
Sbjct: 87 DDHHHIKDFSERSDHRFYLRNKH--ENPKKRRIQVLSSDDESEEFTREVPSVTRKGSKRR 144
Query: 160 RR-EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNTRMNP 216
RR EK+S +M+ LQ LVP C+K K VLD+ I Y+++LQ Q M VN P
Sbjct: 145 RRDEKMSNKMRKLQQLVPNCHKT-DKVSVLDKTIEYMKNLQLQLQMMSTVGVNPYFLP 201
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/118 (31%), Positives = 61/118 (51%)
Query: 149 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLE 208
++D ++A R RRE+ISER+++LQ LVPG K+ A +LDE NY++ L+ Q +L+
Sbjct: 371 SSDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQI--RELQ 427
Query: 209 AVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQIGGGFERM 266
++ R P + T T+ P + + P+ L GGG E++
Sbjct: 428 TLDRRNYPNAAM-SINTAAATTMATSSSPTYNNSNAAMPAFAFPETLGCG-GGGVEQL 483
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/122 (33%), Positives = 63/122 (51%)
Query: 84 SSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKP-AEQNSQPPEPPKQDY--- 139
++ +GNG+ + G I GSR H S + + +P +N+Q + P
Sbjct: 145 ATNHGNGDWLYS--GSTIVNIGSR---HESTSPKLAGNKRPFTGENTQLSKKPSSGTNGK 199
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
I +A D SLA + RRE+ISER+K+LQ+LVP KV +L++ I Y++ LQ
Sbjct: 200 IKPKATTSPK-DPQSLAAKNRRERISERLKVLQELVPNGTKV-DLVTMLEKAIGYVKFLQ 257
Query: 200 RQ 201
Q
Sbjct: 258 VQ 259
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 123 (48.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 43/171 (25%), Positives = 85/171 (49%)
Query: 49 VSGDDPVNLEHKMAHGNG---VRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSG 105
+ G+ N + G G + +R + ++ +++++S + + + + S ++ + G
Sbjct: 27 ICGETNTNPGSESGSGTGFELLAERPTKQMKTNNNMNSTSSSPSSSSSSGSRTSQVISFG 86
Query: 106 SRDDNHHSKAEAEPSSVKPAEQNS--QPPEPPKQDYIHVRARRG-QATDSHSLAERARRE 162
S D +K +S+ + Q S Q ++D ++ RR H LAER RR+
Sbjct: 87 SPD----TKTNPVETSLNFSNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQ 142
Query: 163 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNTR 213
K++ER+ L L+PG K KA VL++ I +++ LQ + ++ E V T+
Sbjct: 143 KLNERLIALSALLPGLKKT-DKATVLEDAIKHLKQLQERVKKLEEERVVTK 192
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 124 (48.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/108 (31%), Positives = 58/108 (53%)
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
++ +P + E PK+ + + +TD ++A R RRE+ISE++++LQ LVPG
Sbjct: 253 AAFRPVNFGLEIVEKPKRKNVKI------STDPQTVAARQRRERISEKIRVLQTLVPGGT 306
Query: 180 KVIGKALVLDEIINYIQSLQRQFLSM-----KLEAVNTRMNPGIEVFP 222
K+ A +LDE NY++ L+ Q ++ KL+ N + FP
Sbjct: 307 KM-DTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFP 353
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 119 (46.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
+A RG A+D SL R RRE+I++R+K LQ LVP KV + +L++ ++Y++ LQ Q
Sbjct: 133 KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKV-DISTMLEDAVHYVKFLQLQI 191
Query: 203 LSMKLE 208
+ E
Sbjct: 192 KLLSSE 197
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 149 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLE 208
++D ++A R RRE++S+R+++LQ LVPG NK+ A +LDE +Y++ L+ Q KLE
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKM-DTASMLDEAASYLKFLKSQV--QKLE 338
Query: 209 AVNT 212
+ T
Sbjct: 339 TLGT 342
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 119 (46.9 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/100 (34%), Positives = 49/100 (49%)
Query: 102 KTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARR 161
+ +G + SK S+ P+ S P P K+ S A + RR
Sbjct: 171 RAAGKKQCRKGSKPNKAASASSPSPSPSPSPSPNKEQ-------------PQSAAAKVRR 217
Query: 162 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
E+ISER+K+LQDLVP KV +L++ INY++ LQ Q
Sbjct: 218 ERISERLKVLQDLVPNGTKV-DLVTMLEKAINYVKFLQLQ 256
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 120 (47.3 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 28/66 (42%), Positives = 38/66 (57%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+R H LAER RREK+S+R L +VPG K+ KA VL + I Y++ LQ Q
Sbjct: 173 SRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKM-DKASVLGDAIKYVKQLQDQVK 231
Query: 204 SMKLEA 209
++ EA
Sbjct: 232 GLEEEA 237
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 120 (47.3 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 32/105 (30%), Positives = 49/105 (46%)
Query: 103 TSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARRE 162
T+ ++D+ E + A S+ P + G + D RR
Sbjct: 169 TTMNKDETSDDSGERKKKKASSAAGKSKQASPRGCRSSQPYRKSGDSIDELFTKFHRRRF 228
Query: 163 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
KI+ER + LQ LVPGC+K +A LD+ I Y++SLQ Q +M +
Sbjct: 229 KITERFRTLQRLVPGCDKS-NQASTLDQTIQYMKSLQHQLKAMSV 272
>RGD|3092 [details] [associations]
symbol:Mitf "microphthalmia-associated transcription factor"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0006461 "protein complex
assembly" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0030154 "cell differentiation" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IEA;ISO]
[GO:0030318 "melanocyte differentiation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=IEA;ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0043473 "pigmentation" evidence=ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046849 "bone remodeling" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010 GO:GO:0045670
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318
GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286 HOGENOM:HOG000231368
OrthoDB:EOG495ZRR EMBL:AF029886 IPI:IPI00563001 UniGene:Rn.31427
ProteinModelPortal:O88368 STRING:O88368 UCSC:RGD:3092
InParanoid:O88368 ArrayExpress:O88368 Genevestigator:O88368
GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 98 (39.6 bits), Expect = 0.00011, P = 0.00011
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI---GKALVLDEI 191
P + A+ Q D+H+L ER RR I++R+K L L+P N K +L
Sbjct: 7 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 66
Query: 192 INYIQSLQRQ 201
++YI+ LQR+
Sbjct: 67 VDYIRKLQRE 76
>UNIPROTKB|O88368 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286
HOGENOM:HOG000231368 OrthoDB:EOG495ZRR EMBL:AF029886
IPI:IPI00563001 UniGene:Rn.31427 ProteinModelPortal:O88368
STRING:O88368 UCSC:RGD:3092 InParanoid:O88368 ArrayExpress:O88368
Genevestigator:O88368 GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 98 (39.6 bits), Expect = 0.00011, P = 0.00011
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI---GKALVLDEI 191
P + A+ Q D+H+L ER RR I++R+K L L+P N K +L
Sbjct: 7 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 66
Query: 192 INYIQSLQRQ 201
++YI+ LQR+
Sbjct: 67 VDYIRKLQRE 76
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 34/88 (38%), Positives = 47/88 (53%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNT 212
H LAER RREK+SE+ L L+PG K K +LD+ I+ ++ LQ Q ++K E T
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPGLKKA-DKVTILDDAISRMKQLQEQLRTLKEEKEAT 178
Query: 213 R-MNPGIEVFPPKDFTQQTFDTAGMPFV 239
R M I V K F + + + P V
Sbjct: 179 RQMESMILVKKSKVFFDEEPNLSCSPSV 206
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 101 IKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQAT---DSHSLAE 157
+ T+GSR+++ K+ S +++QP + + + + T D SLA
Sbjct: 154 VVTTGSRNESLSPKSAGNKRS--HTGESTQPSKKLSSG-VTGKTKPKPTTSPKDPQSLAA 210
Query: 158 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+ RRE+ISER+KILQ+LVP KV +L++ I+Y++ LQ Q
Sbjct: 211 KNRRERISERLKILQELVPNGTKV-DLVTMLEKAISYVKFLQVQ 253
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 46/130 (35%), Positives = 63/130 (48%)
Query: 82 STSSGNGNGNRVNDSDGKRI-KTSGSR-DDNHHSKAEAEPSSVKPAE-QNSQPPEPPKQD 138
+T G G G R G TSG + A A S K A ++SQ P K+
Sbjct: 130 ATGGGGGAGGR---QFGLLFPSTSGGGVSPERAAPAPAPRGSQKRAHAESSQAMSPSKKQ 186
Query: 139 YIHVR----ARRGQAT---DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
R A+ T D SLA + RRE+ISER++ILQ+LVP KV +L++
Sbjct: 187 CGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKV-DLVTMLEKA 245
Query: 192 INYIQSLQRQ 201
I+Y++ LQ Q
Sbjct: 246 ISYVKFLQLQ 255
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 44/163 (26%), Positives = 70/163 (42%)
Query: 64 GNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVK 123
G GV V D+ A ST +G G + + G RD+ P + K
Sbjct: 47 GGGV-SLAGVADQGAAAASTGAGGGARTTTTTTAANGRRREG-RDEEKGGGGGGGPPAQK 104
Query: 124 PAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI- 182
+ +S P V G A SH ER RR++++E + +L+ L+P C V
Sbjct: 105 KQKGSSSSSSSPAALAAAVGDGDGAAKMSHITVERNRRKQMNEHLAVLRSLMP-CFYVKR 163
Query: 183 -GKALVLDEIINYIQSLQRQFLSMKLEAVNTRMNPGIEVFPPK 224
+A ++ +++YI+ LQ+ S LEA R +V P+
Sbjct: 164 GDQASIIGGVVDYIKELQQVLRS--LEAKKNRKAYADQVLSPR 204
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+ T +H+L+E+ RREK++ER L+ ++P +K I K +LD+ I Y+Q LQ++
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISK-IDKVSILDDTIEYLQDLQKR 453
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 111 (44.1 bits), Expect = 0.00024, P = 0.00024
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 143 RARRGQA---TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
R RR A ++ S+A R RRE++S+RM+ LQ LVPG + + A +L+E I Y++ L+
Sbjct: 112 RPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGAR-LDTASMLEEAIRYVKFLK 170
Query: 200 RQFLSMKLEAVNTRMNPG 217
S++ A M+ G
Sbjct: 171 GHVQSLERAAAALHMHGG 188
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 118 (46.6 bits), Expect = 0.00031, P = 0.00031
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 150 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
T +H++ E+ RREK++ER L+ ++P NK I K +LD+ I Y+Q L+R+
Sbjct: 439 TGNHAVLEKKRREKLNERFMTLRKIIPSINK-IDKVSILDDTIEYLQELERR 489
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 114 (45.2 bits), Expect = 0.00036, P = 0.00036
Identities = 32/102 (31%), Positives = 49/102 (48%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNT 212
H +AER RREKI++R L ++PG K+ KA +L + + Y++ +Q KL +
Sbjct: 193 HIIAERKRREKINQRFIELSTVIPGLKKM-DKATILSDAVRYVKEMQE-----KLSELEQ 246
Query: 213 RMNPGIE--VFPPKDFTQQTFDTAGMPFVSQATR-EYSRGTS 251
N G+E + K + G P S A S GT+
Sbjct: 247 HQNGGVESAILLKKPCIATSSSDGGCPAASSAVAGSSSSGTA 288
>ZFIN|ZDB-GENE-010919-1 [details] [associations]
symbol:mitfb "microphthalmia-associated transcription
factor b" species:7955 "Danio rerio" [GO:0046983 "protein
dimerization activity" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IC] [GO:2001141 "regulation of RNA
biosynthetic process" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0030318 "melanocyte
differentiation" evidence=IGI] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] InterPro:IPR011598
InterPro:IPR021802 InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-010919-1 GO:GO:0005654
GO:GO:0006355 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 GO:GO:0030318 GO:GO:0001071 KO:K09455
EMBL:JN105118 RefSeq:NP_571922.2 UniGene:Dr.83675 GeneID:114833
KEGG:dre:114833 CTD:114833 Uniprot:G5CIM9
Length = 500
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 118 EPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 177
+PSS E +P P + + A+ Q D+H+L ER RR I++R+K L L+P
Sbjct: 265 KPSSCSKFESYQRPEGFPVEVEVRALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK 324
Query: 178 CNKVI---GKALVLDEIINYIQSLQR-QFLSMKLE 208
N K +L ++YI+ LQR Q + +LE
Sbjct: 325 SNDPDMRWNKGTILKASVDYIRKLQREQHRTKELE 359
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 116 (45.9 bits), Expect = 0.00059, P = 0.00059
Identities = 31/105 (29%), Positives = 57/105 (54%)
Query: 106 SRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVR--ARRGQATDSHSLAERARREK 163
++ ++ HS EA V+ + + PPE K+ R A + +H AER RREK
Sbjct: 476 AKSESDHSDLEASVREVESSRVVAPPPEAEKRPRKRGRKPANGREEPLNHVEAERQRREK 535
Query: 164 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLE 208
+++R L+ +VP +K+ KA +L + I+YI L+ + +++ +
Sbjct: 536 LNQRFYALRAVVPNVSKM-DKASLLGDAISYINELRGKLTALETD 579
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 106 (42.4 bits), Expect = 0.00077, P = 0.00077
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
P PK + +VR + D ++ R RRE+ISE+++IL+ +VPG K+ A +LDE
Sbjct: 105 PATVPKPNRRNVRI----SDDPQTVVARRRRERISEKIRILKRIVPGGAKM-DTASMLDE 159
Query: 191 IINYIQSLQRQ 201
I Y + L+RQ
Sbjct: 160 AIRYTKFLKRQ 170
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 75 DESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEP 134
+ S K S S G+ N + + S + D +H ++ E S VK A +PPE
Sbjct: 344 ESSKKRTSVSKGSNNDEGMLSFS--TVVRSAANDSDH---SDLEASVVKEAIV-VEPPEK 397
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
+ A + +H AER RREK+++R L+ +VP +K+ KA +L + I+Y
Sbjct: 398 KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKM-DKASLLGDAISY 456
Query: 195 IQSLQ 199
I L+
Sbjct: 457 INELK 461
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 110 (43.8 bits), Expect = 0.00082, P = 0.00082
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 108 DDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISER 167
+++ +SK E PSS N E K I R++ HS+ E+ RR KI+ER
Sbjct: 15 EEDFNSKREG-PSSNTTVHSNRDSKENDKASAI--RSK-------HSVTEQRRRSKINER 64
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+IL++L+P + A L E+I+Y+Q LQ +
Sbjct: 65 FQILRELIPNSEQKRDTASFLLEVIDYVQYLQEK 98
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 111 (44.1 bits), Expect = 0.00086, P = 0.00086
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA + +H ++ER RREK++E IL+ LVP +KV KA +L E I Y++ L+R+
Sbjct: 179 RAAGSCSIKNHVMSERRRREKLNEMFLILKSLVPSIDKV-DKASILSETIAYLKELERR 236
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 267 254 0.00084 114 3 11 23 0.38 34
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 105
No. of states in DFA: 605 (64 KB)
Total size of DFA: 192 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.79u 0.11s 30.90t Elapsed: 00:00:02
Total cpu time: 30.80u 0.11s 30.91t Elapsed: 00:00:02
Start: Fri May 10 08:21:51 2013 End: Fri May 10 08:21:53 2013
WARNINGS ISSUED: 1