BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024464
(267 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/271 (71%), Positives = 215/271 (79%), Gaps = 16/271 (5%)
Query: 1 MDQGSYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHK 60
M+ GSYN AEIW FPV +G G GQ G + G +NR+VSG+D + L+ +
Sbjct: 7 MNDGSYNLAEIWPFPV--------NGNGRGQFGQNLGAQF--LDSNRDVSGNDLMILDRR 56
Query: 61 MAHGNGVRKRRD--VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAE 118
A G G KRR VED+S K VS+S NGNGN VNDSD KR+KTSG+ D+NH SK+EAE
Sbjct: 57 GARGGGGAKRRHDVVEDDSTKVVSSS--NGNGNAVNDSDAKRLKTSGNLDENHDSKSEAE 114
Query: 119 PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
PSS K EQN+QPPE PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC
Sbjct: 115 PSSGKHVEQNTQPPELPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 174
Query: 179 NKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGM 236
NKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVNTRM PGIE FP KDF QQTFD AGM
Sbjct: 175 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMTPGIEAFPSKDFGQQTFDAAGM 234
Query: 237 PFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
F SQATR+Y+RGTSP+WLHMQ+GGGFER +
Sbjct: 235 AFGSQATRDYNRGTSPEWLHMQVGGGFERTS 265
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 346 bits (888), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 187/275 (68%), Positives = 213/275 (77%), Gaps = 14/275 (5%)
Query: 6 YNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGT----NREVSGDD--PVNLEH 59
+N +EIW FP+ G S+ +SG L + AH +L+ FG N EVS D P+ L+
Sbjct: 25 FNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLTHFGDIAIGNPEVSPTDSLPLQLQQ 84
Query: 60 KMAHGNGV-RKRRDVEDESAKHVSTSSGNGNGNRVN---DSDGKRIKTSGSRDDNHHSKA 115
++ HG+GV +KRRD + +S K STS+GN + DS GKR+KT+ RDDNH SK
Sbjct: 85 RLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSSAGNDSGGKRVKTAACRDDNHESKT 144
Query: 116 EAEPSSVKPAEQNSQP-PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 174
EAEP S K EQNSQP PE PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL
Sbjct: 145 EAEPRSGK-TEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 203
Query: 175 VPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFD 232
VPGCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+R+ PGIEVFPPKD+ QQTFD
Sbjct: 204 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKDYGQQTFD 263
Query: 233 TAGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
T G+ F SQATREYSRG+SP+WLHMQIGGGFER T
Sbjct: 264 TTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 298
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/278 (67%), Positives = 208/278 (74%), Gaps = 21/278 (7%)
Query: 1 MDQG-SYNFAEIWQFPVPGSGSMSES------GGGLGQKGAHFGQHLSQFGTNREVSG-- 51
++QG SY+ AEIW +P+ G G+ GG LGQ HFG + G NRE SG
Sbjct: 7 INQGASYHLAEIWNYPISGGGAGEAGGGLELRGGHLGQNLGHFGDNAGVGGANREASGGG 66
Query: 52 DDPVNLEHKMAHGNGVRKRRD--VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDD 109
DDP+ LE +G RKRRD EDE K VSTS G GN ND DGKR+KTSGSRD+
Sbjct: 67 DDPMVLER-----SGGRKRRDAATEDEGGKAVSTSGG---GNVANDCDGKRLKTSGSRDE 118
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
N SK E E SS KP EQN Q +PPKQD+IHVRARRGQATDSHSLAERARREKISERMK
Sbjct: 119 NRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMK 178
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFT 227
ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMN GIE FP KDF
Sbjct: 179 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSKDFG 238
Query: 228 QQTFDTAGMPFVSQATREYSRGTSPDWLHMQIGGGFER 265
QQTFD AG+ + SQATREY R +SP+WLHMQ+GGGF+R
Sbjct: 239 QQTFDAAGVAYSSQATREYGRASSPEWLHMQVGGGFDR 276
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 332 bits (851), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 183/271 (67%), Positives = 201/271 (74%), Gaps = 21/271 (7%)
Query: 1 MDQG-SYNFAEIWQFPVPGSGSMSES------GGGLGQKGAHFGQHLSQFGTNREVSG-- 51
++QG SY+ AEIW +P+ G G+ GG LGQ HFG + G NRE SG
Sbjct: 7 INQGASYHLAEIWNYPISGGGAGEAGGGLELRGGHLGQNLGHFGDNAGVGGANREASGGG 66
Query: 52 DDPVNLEHKMAHGNGVRKRRD--VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDD 109
DDP+ LE +G RKRRD EDE K VSTS G GN ND DGKR+KTSGSRD+
Sbjct: 67 DDPMVLER-----SGGRKRRDAATEDEGGKAVSTSGG---GNVANDCDGKRLKTSGSRDE 118
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
N SK E E SS KP EQN Q +PPKQD+IHVRARRGQATDSHSLAERARREKISERMK
Sbjct: 119 NRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMK 178
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFT 227
ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMN GIE FP KDF
Sbjct: 179 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSKDFG 238
Query: 228 QQTFDTAGMPFVSQATREYSRGTSPDWLHMQ 258
QQTFD AG+ + SQATREY R +SP+WLHMQ
Sbjct: 239 QQTFDAAGVAYSSQATREYGRASSPEWLHMQ 269
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/272 (63%), Positives = 194/272 (71%), Gaps = 31/272 (11%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFG---TNREVSGDDPVNLEHKM 61
SY+ +EIWQFP P + LG + HF + F T V G DP ++ K
Sbjct: 15 SYHLSEIWQFPPPNAPDE------LGLRRPHFTHGFADFAPDPTRDAVPGRDPASIAQK- 67
Query: 62 AHGNGVRKRRDV---EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAE 118
KRRD E+ESAK ST++ G V D GKR+KTS S K E E
Sbjct: 68 -------KRRDASAEEEESAKGASTTNAVNEGGGVGD--GKRVKTSES------GKGEGE 112
Query: 119 PSSVKPAEQNSQPP-EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 177
SS K AEQ+ +PP EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQD+VPG
Sbjct: 113 TSSGKLAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPG 172
Query: 178 CNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAG 235
CNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+R+ P IEVFPPKDF QQTFDT G
Sbjct: 173 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLAPRIEVFPPKDFDQQTFDTTG 232
Query: 236 MPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
MPF SQATREYSRG+SP+WLHMQ+GGG+ER T
Sbjct: 233 MPFASQATREYSRGSSPEWLHMQVGGGYERAT 264
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 158/205 (77%), Positives = 170/205 (82%), Gaps = 7/205 (3%)
Query: 65 NGVRKRRD--VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV 122
+G RKRRD EDE K VSTS G GN ND DGKR+KTSGSRD+N SK E E SS
Sbjct: 6 SGGRKRRDAATEDEGGKAVSTS---GGGNVANDCDGKRLKTSGSRDENRDSKTEVETSSG 62
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
KP EQN Q +PPKQD+IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI
Sbjct: 63 KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 122
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVS 240
GKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMN GIE FP KDF QQTFD AG+ + S
Sbjct: 123 GKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSKDFGQQTFDAAGVAYSS 182
Query: 241 QATREYSRGTSPDWLHMQIGGGFER 265
QATREY R +SP+WLHMQ+GGGF+R
Sbjct: 183 QATREYGRASSPEWLHMQVGGGFDR 207
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/266 (66%), Positives = 199/266 (74%), Gaps = 13/266 (4%)
Query: 6 YNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGN 65
++ AEIWQFP +++ GGGLG + FG L Q+G D L H G
Sbjct: 22 FSLAEIWQFPA----AINGGGGGLGLRRPQFGNGLGQYGEFGPGLNRDGNGLNHA---GG 74
Query: 66 GVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPA 125
G +KRRD ED+SAK VSTS NG N VNDSDGKR K SG++++ K E E SS K A
Sbjct: 75 GGKKRRDSEDDSAKCVSTS--NGGANAVNDSDGKRTKASGNKNEGGDGKVEGEASSGKHA 132
Query: 126 EQNSQPPEPPKQD--YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 183
EQ+S+PP YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG
Sbjct: 133 EQSSKPPPSDPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 192
Query: 184 KALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQ 241
KALVLDEIINYIQSLQRQ FLSMKLEAVN+R+N GIE FPPKD+ QQTFD AGMPFVSQ
Sbjct: 193 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQQTFDLAGMPFVSQ 252
Query: 242 ATREYSRGTSPDWLHMQIGGGFERMT 267
ATRE SRG+SP+WLHMQ+GGGFER T
Sbjct: 253 ATREPSRGSSPEWLHMQVGGGFERTT 278
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/273 (64%), Positives = 204/273 (74%), Gaps = 16/273 (5%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFG---TNREVSGDDPVNLEHKM 61
+Y+ AEIW FPV + ++ E GLG + A+FGQ + QF NR+VS D+ E
Sbjct: 18 AYSLAEIWPFPVNSASAIGEPTAGLGLRIANFGQIMGQFADSSANRDVSVDESTVTEQSG 77
Query: 62 AHGNGVRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEP 119
+ G RKRRDV EDES+K VSTSSG+G +N S+GKR+K S + D+N SKAE E
Sbjct: 78 SRGG-GRKRRDVSSEDESSKIVSTSSGSG----MNASNGKRMKISRTPDENGGSKAELEA 132
Query: 120 SSV---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
SSV KPAE+ S+P E KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP
Sbjct: 133 SSVAGEKPAEE-SKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 191
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA 234
GCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMN +E FP KD QTFD A
Sbjct: 192 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDLGVQTFDAA 251
Query: 235 GMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
M + SQATREY++G+ P+WLHMQ+GG ER +
Sbjct: 252 AMIYGSQATREYAQGSQPEWLHMQVGGSIERAS 284
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 305 bits (782), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 177/266 (66%), Positives = 197/266 (74%), Gaps = 13/266 (4%)
Query: 6 YNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGN 65
++ AEIWQFP +++ GGGLG + FG L Q+G D L H G
Sbjct: 22 FSLAEIWQFPA----AINGGGGGLGLRRPQFGNGLGQYGEFGPGLNRDGNGLNHA---GG 74
Query: 66 GVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPA 125
G +KRRD ED+SAK VSTS NG N VNDSDGKR K SG++++ K E E SS K A
Sbjct: 75 GGKKRRDSEDDSAKCVSTS--NGGANAVNDSDGKRTKASGNKNEGGDGKVEGEASSGKHA 132
Query: 126 EQNSQPPEPPKQD--YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 183
EQ+S+PP YIHVRARRGQATDSH LAERARREKISERMKILQDLVPGCNKVIG
Sbjct: 133 EQSSKPPPSDPPKQDYIHVRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIG 192
Query: 184 KALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQ 241
KALVLDEIINYIQSLQRQ FLSMKLEAVN+R+N GIE FPPKD+ QQTFD AGMPFVSQ
Sbjct: 193 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQQTFDLAGMPFVSQ 252
Query: 242 ATREYSRGTSPDWLHMQIGGGFERMT 267
ATRE SRG SP+WLHMQ+GGGFER T
Sbjct: 253 ATREPSRGFSPEWLHMQVGGGFERTT 278
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/268 (62%), Positives = 189/268 (70%), Gaps = 32/268 (11%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHG 64
SY+ +EIW FP P + LG + AHF T V G D ++ K
Sbjct: 15 SYHLSEIWHFPPPNAPD------ALGLRRAHFAPG----PTRHAVPGRDLASIAPK---- 60
Query: 65 NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDS--DGKRIKTSGSRDDNHHSKAEAEPSSV 122
KRR E+E V ++ G N V++ DGKR+KTS S K E E S
Sbjct: 61 ----KRRQAEEE---EVESTRGASTTNAVDEGCGDGKRVKTSES------GKGEGESCSG 107
Query: 123 KPAEQNSQPP-EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
KPA+Q+ +PP EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV
Sbjct: 108 KPAKQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 167
Query: 182 IGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFV 239
IGKALVLDEIINYIQSLQRQ FLSMKLEAVN+R+ PGIEVFPPKDF QQTFDT GMPF
Sbjct: 168 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIAPGIEVFPPKDFDQQTFDTTGMPFA 227
Query: 240 SQATREYSRGTSPDWLHMQIGGGFERMT 267
SQATR+YSRG+SP+WLHMQ+G GFER T
Sbjct: 228 SQATRDYSRGSSPEWLHMQVGDGFERAT 255
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/175 (84%), Positives = 156/175 (89%), Gaps = 4/175 (2%)
Query: 96 SDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQP-PEPPKQDYIHVRARRGQATDSHS 154
S GKR+KT+ RDDNH SK EAEP S K EQNSQP PE PKQDYIHVRARRGQATDSHS
Sbjct: 1 SGGKRVKTAACRDDNHESKTEAEPRSGK-TEQNSQPTPEQPKQDYIHVRARRGQATDSHS 59
Query: 155 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+
Sbjct: 60 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 119
Query: 213 RMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
R+ PGIEVFPPKD+ QQTFDT G+ F SQATREYSRG+SP+WLHMQIGGGFER T
Sbjct: 120 RIGPGIEVFPPKDYGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 174
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/269 (62%), Positives = 187/269 (69%), Gaps = 29/269 (10%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQ-HLSQF--GTNREVSGDDPVNLEHKM 61
S++ +EIWQFP P S LG + HF + F G R+ DP ++ HK
Sbjct: 15 SFHLSEIWQFPPPNSPD------ALGLRRPHFAHGSFADFAPGPTRDA---DPASIAHKK 65
Query: 62 AHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS 121
R E+ESAK ST++ G DGKRIK S S + E SS
Sbjct: 66 P-----RHAAGEEEESAKGASTTNAVDEGG---GGDGKRIKASESGEGGR------ENSS 111
Query: 122 VKPAEQNSQPP-EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
KPAEQ+ +PP EPPKQDYIHVRARRGQATDSHSLAERARREKISERMK LQDLVPGCNK
Sbjct: 112 GKPAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNK 171
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
VIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RM GIEVFPPKDF QQTFDT MPF
Sbjct: 172 VIGKALVLDEIINYIQSLQRQAEFLSMKLEAVNSRMESGIEVFPPKDFDQQTFDTTDMPF 231
Query: 239 VSQATREYSRGTSPDWLHMQIGGGFERMT 267
SQATREYSRG+S +WLHMQ+GGGFER T
Sbjct: 232 ASQATREYSRGSSSEWLHMQVGGGFERAT 260
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/270 (62%), Positives = 195/270 (72%), Gaps = 25/270 (9%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHG 64
+Y+ AEIW FPV + ++ E GL NR+VS D+ E + G
Sbjct: 18 AYSLAEIWPFPVNSASAIGEPTAGLDSSA------------NRDVSVDESTVTEQSGSRG 65
Query: 65 NGVRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV 122
G RKRRDV EDES+K VSTSSG+G +N S+GKR+K S + D+N SKAE E SSV
Sbjct: 66 GG-RKRRDVSSEDESSKIVSTSSGSG----MNASNGKRMKISRTPDENGGSKAELEASSV 120
Query: 123 ---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
KPAE+ S+P E KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN
Sbjct: 121 AGEKPAEE-SKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
Query: 180 KVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
KVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMN +E FP KD QTFD A M
Sbjct: 180 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDLGVQTFDAAAMI 239
Query: 238 FVSQATREYSRGTSPDWLHMQIGGGFERMT 267
+ SQATREY++G+ P+WLHMQ+GG ER +
Sbjct: 240 YGSQATREYAQGSQPEWLHMQVGGSIERAS 269
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/269 (61%), Positives = 185/269 (68%), Gaps = 25/269 (9%)
Query: 6 YNFAEIWQ-FPVPGSGSMSESGGGLGQKGAHFGQHLS-QFGTNREVSGDDPVNLEHKMAH 63
++ AEIWQ FP SG + FG QFG D H +
Sbjct: 23 FSLAEIWQQFPPAISGGGGLG-----LRSPQFGHGPGGQFG-------DFTTGPSHGLGP 70
Query: 64 GNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEA--EPSS 121
N ++R ED+SAK VSTS N VN+ DGKR+K + + + E SS
Sbjct: 71 SNSRKRRDSEEDDSAKGVSTS------NAVNEGDGKRVKGNRNEGGGDGGNNKGEGEVSS 124
Query: 122 VKPAEQNSQPP-EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
KPAEQ+++P EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK
Sbjct: 125 GKPAEQSAKPASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 184
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
VIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+R+N GIE FPPKDF QQ FD AG+PF
Sbjct: 185 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIEAFPPKDFGQQAFDPAGIPF 244
Query: 239 VSQATREYSRGTSPDWLHMQIGGGFERMT 267
SQA REYSRG+SPDWLHMQIGG FER T
Sbjct: 245 GSQAPREYSRGSSPDWLHMQIGGSFERTT 273
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/273 (57%), Positives = 191/273 (69%), Gaps = 20/273 (7%)
Query: 2 DQGSYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVS-----GDDPVN 56
D YN AEIW FP+ + + + + + N V+ DP+
Sbjct: 12 DTVPYNLAEIWPFPMNSATAATSFHNNNNAANSLAAAAAAGISMNMNVNLSVNRDHDPMV 71
Query: 57 LEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAE 116
++ GVR+RR+ +D+SAK VSTS+ + N +N+ D KR+KT GS ++NH SKAE
Sbjct: 72 MDQAPNLNGGVRRRRE-DDDSAKGVSTSN---DANAMNEGDNKRLKTGGS-NENHESKAE 126
Query: 117 AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
E + ++P EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP
Sbjct: 127 GE--------ETAKPAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 178
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA 234
GCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+R++PGIE FP K+F Q +D +
Sbjct: 179 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLSPGIEGFPSKEFGQPPYDPS 238
Query: 235 GMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
GM F SQ++REY R TSP+WLHMQIGGGFER T
Sbjct: 239 GMAFGSQSSREYGRDTSPEWLHMQIGGGFERTT 271
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 176/317 (55%), Positives = 205/317 (64%), Gaps = 60/317 (18%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFG---TNREVSGDDPVNLEHKM 61
+Y+ AEIW FPV + ++ E GLG + A+FGQ + QF NR+VS D+ E
Sbjct: 18 AYSLAEIWPFPVNSASAIGEPTAGLGLRIANFGQIMGQFADSSANRDVSVDESTVTEQSG 77
Query: 62 AHGNGVRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEP 119
+ G G RKRRDV EDES+K VSTSSG+G +N S+GKR+K S + D+N SKAE E
Sbjct: 78 SRGGG-RKRRDVSSEDESSKIVSTSSGSG----MNASNGKRMKISRTPDENGGSKAELEA 132
Query: 120 SSV---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAER------------------ 158
SSV KPAE+ S+P E KQDYIHVRARRGQATDSHSLAER
Sbjct: 133 SSVAGEKPAEE-SKPAEQSKQDYIHVRARRGQATDSHSLAERVMQFYTLLIFCFLVVPQM 191
Query: 159 --------------------------ARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
ARREKISERMKILQDLVPGCNKVIGKALVLDEII
Sbjct: 192 PKLKRIGLSWNSRSRCRCIGVSVYINARREKISERMKILQDLVPGCNKVIGKALVLDEII 251
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGT 250
NYIQSLQRQ FLSMKLEAVN+RMN +E FP KD QTFD A M + SQATREY++G+
Sbjct: 252 NYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDLGVQTFDAAAMIYGSQATREYAQGS 311
Query: 251 SPDWLHMQIGGGFERMT 267
P+WLHMQ+GG ER +
Sbjct: 312 QPEWLHMQVGGSIERAS 328
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/275 (59%), Positives = 193/275 (70%), Gaps = 28/275 (10%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQF---GTNREVSGDDPVNLEHKM 61
SY+ A IW F GS+ LG + A+ Q+L F TNR+ S ++ E
Sbjct: 18 SYSLASIWPFGGDQGGSV------LGLRMANLAQNLGGFRECSTNRDGSMEESTVTEQS- 70
Query: 62 AHGNGVRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEP 119
G RKR+DV EDES++ VSTSS N ++++S+ KR+K SRD+N KAE +P
Sbjct: 71 ---GGGRKRKDVSSEDESSRMVSTSSAN----QLSNSNDKRMKVVESRDENGGIKAEVDP 123
Query: 120 SSV---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
+S K AEQ S PEPPK DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP
Sbjct: 124 NSSDGKKLAEQ-SPKPEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 181
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN--PGIEVFPPKDFTQQTFD 232
GCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMN PGIE F K+ Q +D
Sbjct: 182 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNITPGIEGFTVKNIVNQPYD 241
Query: 233 TAGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
AG+ + SQA R+Y++G +WLHMQIGGGFER +
Sbjct: 242 AAGILYGSQAARDYTQGAQTEWLHMQIGGGFERTS 276
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/273 (56%), Positives = 188/273 (68%), Gaps = 28/273 (10%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHG 64
SY+ EIW FP P S + LG + A+ +R+ S D+ E + +
Sbjct: 18 SYSLTEIWPFPPPSSTA-------LGLRMANLA--------DRDGSVDESTVTEQRGGNR 62
Query: 65 NGVRKRRDV---EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS 121
NG RK RD+ ED+S+ VST++ + + +ND +GKR K SGSR++N+ S+AE E SS
Sbjct: 63 NGNRKARDLSSEEDDSSIMVSTTT---SAHDLNDLNGKRRKISGSRNENNDSRAEIEASS 119
Query: 122 V---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
KPAE +S+P EPP QDYIHVR+RRGQATDSHSLAERARRE+I ERMKILQDLVPGC
Sbjct: 120 AANNKPAEPSSKPSEPPMQDYIHVRSRRGQATDSHSLAERARRERIGERMKILQDLVPGC 179
Query: 179 NKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRM--NPGIEVFPPKDFTQQTFDTA 234
NKVIGKAL LDEIINYIQSLQ Q FLSMKLEAVN+RM +P IE PKD Q FD
Sbjct: 180 NKVIGKALALDEIINYIQSLQCQVEFLSMKLEAVNSRMSTSPAIEGLHPKDLGAQPFDAT 239
Query: 235 GMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
GM F Q TR+Y +G+ P+WLHMQ+GG F+R T
Sbjct: 240 GMIFGPQPTRDYVQGSQPEWLHMQVGGSFKRAT 272
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/156 (87%), Positives = 140/156 (89%), Gaps = 3/156 (1%)
Query: 114 KAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQD 173
K EAEPSS K E +QPPEP KQDYIHVRARRGQATDSHSLAERARREKISERMKILQD
Sbjct: 46 KHEAEPSSGKHVEHKTQPPEPSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQD 105
Query: 174 LVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTF 231
LVPGCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVNTRMNPGIEVF KDF QTF
Sbjct: 106 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIEVFASKDFG-QTF 164
Query: 232 DTAGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
DTAGM F SQATREYSRGTSP+WLHMQ+GGGFER +
Sbjct: 165 DTAGMAFGSQATREYSRGTSPEWLHMQVGGGFERTS 200
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 158/274 (57%), Positives = 184/274 (67%), Gaps = 30/274 (10%)
Query: 4 GSYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTN--REVSGDDPVNLEHKM 61
G +N AEIWQFP+ G + +S + + G + QFG + DP + H +
Sbjct: 11 GPFNLAEIWQFPLNGVSTAGDSS-----RRSFVGPN--QFGDADLTTAANGDPARMSHAL 63
Query: 62 AHG-----NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAE 116
+ +G KRR+ E +SAK VST + + + KR K D+ KAE
Sbjct: 64 SQAVIEGISGAWKRREDESKSAKIVSTIGAS-------EGENKRQKI----DEVCDGKAE 112
Query: 117 AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
AE + EQ Q EP K DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP
Sbjct: 113 AESLGTE-TEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 170
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA 234
GCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMNPGIEVFPPK+F QQ F+
Sbjct: 171 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEFGQQAFENP 230
Query: 235 GMPFVSQATREYSRGTSPDWLHMQIG-GGFERMT 267
+ F SQ+TREYSRG SP+WLHMQIG GGFER +
Sbjct: 231 EIQFGSQSTREYSRGASPEWLHMQIGSGGFERTS 264
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/274 (58%), Positives = 186/274 (67%), Gaps = 30/274 (10%)
Query: 4 GSYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFG-TNREVSGD-DPVNLEHKM 61
G +N AEIWQFP+ G + +S + + G + QFG + S + DP + H +
Sbjct: 11 GPFNLAEIWQFPLNGVSTAGDSS-----RRSFVGPN--QFGDADLTTSANGDPARMSHAL 63
Query: 62 AHG-----NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAE 116
+ +G KRR+ E +SAK VST + + + KR K D+ KAE
Sbjct: 64 SQAVIEGISGAWKRREDESKSAKIVSTIGAS-------EGENKRQKI----DEVCDGKAE 112
Query: 117 AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
AE + EQ Q EP K DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP
Sbjct: 113 AESLGTE-TEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 170
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA 234
GCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMNPGIEVFPPK+F QQ F+
Sbjct: 171 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEFGQQAFENP 230
Query: 235 GMPFVSQATREYSRGTSPDWLHMQIG-GGFERMT 267
+ F SQ+TREYSRG SP+WLHMQIG GGFER +
Sbjct: 231 EIQFGSQSTREYSRGASPEWLHMQIGSGGFERTS 264
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/269 (57%), Positives = 174/269 (64%), Gaps = 39/269 (14%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHG 64
+Y+ EIWQ P H F S P+N K+
Sbjct: 4 AYHLPEIWQSRPP-----------------HLAPGYPDFSIQDLTSEQKPLNHARKIT-- 44
Query: 65 NGVRKRRDVEDESAKHVSTSSG--NGNGNRVNDS--DGKRIKTSGSRDDNHHSKAEAEPS 120
R ++S + VST++G GN N VND DGKR KTSG+ SK E E S
Sbjct: 45 ------RVTNEDSVQCVSTTNGGARGNSNAVNDDGGDGKRSKTSGN------SKGE-ENS 91
Query: 121 SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
S K AE+ S P P K+DYIHVRARRGQATDSHSLAERARREKISERMK LQDLVPGCNK
Sbjct: 92 SGKHAEETSDEPHP-KKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNK 150
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
VIGKALVLDEIINYIQSL Q FLSMKLEAVN+R PG+EVFPPK F QQTFDT +PF
Sbjct: 151 VIGKALVLDEIINYIQSLHHQVEFLSMKLEAVNSRPTPGMEVFPPKTFDQQTFDTTAIPF 210
Query: 239 VSQATREYSRGTSPDWLHMQIGGGFERMT 267
S ATREYSRG SP+WLHMQ+GGGFER +
Sbjct: 211 ASHATREYSRGASPEWLHMQLGGGFERTS 239
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 183/274 (66%), Gaps = 30/274 (10%)
Query: 4 GSYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTN--REVSGDDPVNLEHKM 61
G +N AEIWQFP+ G + +S + + G + QFG + DP + H +
Sbjct: 11 GPFNLAEIWQFPLNGVSTAGDSS-----RRSFAGPN--QFGDTDLTAAANGDPARMSHVL 63
Query: 62 AHG-----NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAE 116
+ +G KRR+ E +S K VS N ++ + KR K D+ KAE
Sbjct: 64 SQAVIEGISGAWKRREDESKSVKIVSI-------NGASEGENKRQKI----DEVCDGKAE 112
Query: 117 AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
AE + EQ EP K DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP
Sbjct: 113 AESLGTE-TEQKKLQIEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 170
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA 234
GCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMNPGIEVFPPK+F QQTF+
Sbjct: 171 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEFGQQTFENP 230
Query: 235 GMPFVSQATREYSRGTSPDWLHMQIG-GGFERMT 267
M F SQ+TREY+RG SP+WLHMQIG GGFER +
Sbjct: 231 EMQFGSQSTREYNRGASPEWLHMQIGSGGFERTS 264
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/201 (68%), Positives = 160/201 (79%), Gaps = 11/201 (5%)
Query: 74 EDESAKHVSTSSGNGNGNRVNDSDGKRIK--TSGSRDDNHHSKAEAEPSS---VKPAEQN 128
EDES+K +STSSGN DS+ KR+K SG ++N +SK EAE SS K A+Q+
Sbjct: 62 EDESSKIMSTSSGND----ATDSEAKRLKGMKSGDGNENSNSKTEAEASSGLCNKLADQS 117
Query: 129 SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
+QP E PKQDYIHVRARRGQATDSHSLAERARREKISERM ILQDLVPGCNKVIGKA VL
Sbjct: 118 NQPSEAPKQDYIHVRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVL 177
Query: 189 DEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREY 246
DEIINYIQ+LQRQ FLSMKLEAVN++MNPGIE FPPKDF Q ++T + F SQA REY
Sbjct: 178 DEIINYIQALQRQVEFLSMKLEAVNSQMNPGIEGFPPKDFGAQAYETPSLAFSSQAPREY 237
Query: 247 SRGTSPDWLHMQIGGGFERMT 267
++G++ DWLHMQ+GG R+T
Sbjct: 238 AQGSATDWLHMQVGGALGRVT 258
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/268 (56%), Positives = 177/268 (66%), Gaps = 19/268 (7%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHG 64
SY EIW F + + G +G A FG+ R+ S ++ E + G
Sbjct: 18 SYTLTEIWPFSALNGDASAGLGLRVGNLSAGFGE--------RDGSVEESTVTEQSVGGG 69
Query: 65 NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVK- 123
RKRRD E + S + +GN + DS+ KR+K SGS+++N SKAE E SS
Sbjct: 70 ---RKRRDFSSED-ESSKMVSTSSSGNELQDSNVKRMKISGSQNENGKSKAEVEASSAND 125
Query: 124 --PAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
AEQNS+ EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV
Sbjct: 126 KNAAEQNSKISEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 185
Query: 182 IGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR--MNPGIEVFPPKDFTQQTFDTAGMP 237
IGKALVLDEIINYIQSLQRQ FLSMKLEAVN+R MNP +E F PKD Q FD GM
Sbjct: 186 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMGMNPTVEGFHPKDADAQPFDATGMI 245
Query: 238 FVSQATREYSRGTSPDWLHMQIGGGFER 265
F Q R+Y++ + +WLHMQIGG ER
Sbjct: 246 FGPQVARDYAQASHHEWLHMQIGGNLER 273
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 167/283 (59%), Positives = 187/283 (66%), Gaps = 47/283 (16%)
Query: 4 GSYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAH 63
G Y EIWQFP+ GSG QF + +NLE + A
Sbjct: 14 GPYTLEEIWQFPINGSGR-------------------GQF---------ELLNLERRAAA 45
Query: 64 GNGVRKRRDVEDESA---KHVSTSSGNGNGNR---VNDSDGKRIKTSGSRDDNHH----- 112
R+ D++ + + K + S N N N +ND DGKR+K GSRDDNHH
Sbjct: 46 SARKRREVDLDVDDSSSSKPTTLSPTNANTNTNGLLNDCDGKRLKAWGSRDDNHHHQQQQ 105
Query: 113 ------SKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISE 166
S++EAEPSS K E QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISE
Sbjct: 106 QQQQHDSRSEAEPSSGKLVEHKPQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISE 165
Query: 167 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPK 224
RMKILQD+VPGCNKV GKALVLDEIINYIQSLQRQ FLSMKLEAVN MNP EVFP K
Sbjct: 166 RMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEFLSMKLEAVNLNMNPETEVFPSK 225
Query: 225 DFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
DF Q TFDTAGM F SQATREY+ TSP+WLHMQ+GGGF+R +
Sbjct: 226 DFGQHTFDTAGMAFGSQATREYNHCTSPEWLHMQVGGGFQRTS 268
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 163/216 (75%), Gaps = 15/216 (6%)
Query: 64 GNG--VRKRRDV---EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAE 118
GNG +RK RD +D+S+K VST++ + N +NDS+GKR K SGSR +N+ S+AE E
Sbjct: 1 GNGTRIRKTRDFSSEKDDSSKMVSTTT---SANDLNDSNGKRRKISGSRSENNDSRAETE 57
Query: 119 PSSV---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 175
SS K AEQ+S+P EPPKQDYIHVRARRGQATDSHSLAERARREKISERM +LQDLV
Sbjct: 58 ASSAANNKTAEQSSKPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMNMLQDLV 117
Query: 176 PGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN--PGIEVFPPKDFTQQTF 231
PGCNKVIGKALVLDEIINYIQSLQ Q FLSMKLEAVN+RMN P E PKD Q F
Sbjct: 118 PGCNKVIGKALVLDEIINYIQSLQCQVEFLSMKLEAVNSRMNTSPTTEHLHPKDLGAQPF 177
Query: 232 DTAGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
GM Q TREY +G+ +WLHMQ+GG FER T
Sbjct: 178 VATGMISGPQPTREYVQGSQSEWLHMQVGGSFERAT 213
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 164/212 (77%), Gaps = 14/212 (6%)
Query: 66 GVRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSK-AEAEPSSV 122
G RKR+++ EDES+K VST++ + N +NDS+GKR+KT S++ N SK AE E SS
Sbjct: 15 GGRKRKELSSEDESSKIVSTTT---SANELNDSNGKRMKTPVSKNGNTGSKEAEVEASSA 71
Query: 123 ---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
KP ++NS+P EPPKQDYIHVRARRGQATDSHSLAERARRE+ISERMKILQDLVPGCN
Sbjct: 72 DGSKP-DKNSKPAEPPKQDYIHVRARRGQATDSHSLAERARRERISERMKILQDLVPGCN 130
Query: 180 KVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRM--NPGIEVFPPKDFTQQTFDTAG 235
KVIGKALVLDEIINYIQSLQ+Q FLSMKLEAVN+R+ NP E F KD Q D AG
Sbjct: 131 KVIGKALVLDEIINYIQSLQQQVEFLSMKLEAVNSRINVNPSFEGFHSKDLGLQPIDGAG 190
Query: 236 MPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
M F SQ REY++G P+WL M +GG F+R T
Sbjct: 191 MIFGSQTAREYAQGLHPEWLQMHVGGNFKRAT 222
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/220 (64%), Positives = 161/220 (73%), Gaps = 20/220 (9%)
Query: 68 RKRRDV-----------EDESAKHVS-TSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKA 115
RKR+D ED+ +K +S T++ N + + K++K GS +N KA
Sbjct: 50 RKRKDCSSSSSSASAADEDDCSKVLSSTTTATANLSNNDSGSNKQMKLGGSSVENDGFKA 109
Query: 116 EAEPSSV---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 172
EAE SS K +EQ+++P E PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ
Sbjct: 110 EAEASSAGGNKSSEQSNKPCEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 169
Query: 173 DLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR--MNPGIEVFPPKDFTQ 228
DLVPGCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+R MNP I+ FP KD
Sbjct: 170 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMNPTIDGFPSKDVGT 229
Query: 229 QTFDTAGMPFVSQATREYSRGTS-PDWLHMQIGGGFERMT 267
Q FD AGM F SQA R Y++G+S P WLHMQIGGGFER T
Sbjct: 230 QPFDIAGMVFGSQAARGYAQGSSPPGWLHMQIGGGFERTT 269
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 128/184 (69%), Positives = 144/184 (78%), Gaps = 6/184 (3%)
Query: 90 GNRVNDSDGKRIKTSGSRDD-NHHSKAEAEPSS---VKPAEQNSQPPEPPKQDYIHVRAR 145
GN DS+ K +K SRD+ + K EAE SS K A+QN+QP E PKQDYIHVRAR
Sbjct: 3 GNDATDSEAKCLKGMKSRDEETANQKXEAEASSGLCNKLADQNTQPLEAPKQDYIHVRAR 62
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FL 203
RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLDEIINYIQ+LQRQ FL
Sbjct: 63 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 122
Query: 204 SMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQIGGGF 263
SMKLEAVN+R N GIE FPPKDF Q +D + F QA REY +G++ +WLHMQ+GG F
Sbjct: 123 SMKLEAVNSRTNSGIEGFPPKDFGAQAYDAPNLAFGLQAPREYVQGSATEWLHMQVGGAF 182
Query: 264 ERMT 267
ER+T
Sbjct: 183 ERVT 186
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 182/273 (66%), Gaps = 38/273 (13%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFG---TNREVSGDDPVNLEHKM 61
+Y+ AEIW FPV + ++ E GLG + A+FGQ + QF NR+VS D+ E
Sbjct: 18 AYSLAEIWPFPVNSASAIGEPTAGLGLRIANFGQIMGQFADSSANRDVSVDESTVTEQSG 77
Query: 62 AHGNGVRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEP 119
+ G RKRRDV EDES+K VSTSSG+G +N S+GKR+K S + D+N SKAE E
Sbjct: 78 SRGG-GRKRRDVSSEDESSKIVSTSSGSG----MNASNGKRMKISRTPDENGGSKAELEA 132
Query: 120 SSV---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
SSV KPAE+ S+P E KQDYIHVRARRGQATDSHSLAER
Sbjct: 133 SSVAGEKPAEE-SKPAEQSKQDYIHVRARRGQATDSHSLAER------------------ 173
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA 234
VIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMN +E FP KD QTFD A
Sbjct: 174 ----VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDLGVQTFDAA 229
Query: 235 GMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
M + SQATREY++G+ P+WLHMQ+GG ER +
Sbjct: 230 AMIYGSQATREYAQGSQPEWLHMQVGGSIERAS 262
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/235 (60%), Positives = 167/235 (71%), Gaps = 18/235 (7%)
Query: 46 NREVSGDDPVNLEHKMAHGNG-VRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIK 102
NR+ S ++ E +HG G RKR+DV EDES+K VS ++ + N + + +GKR+K
Sbjct: 72 NRDGSIEESTVTEQSGSHGGGGCRKRKDVISEDESSKLVSATT---SANELTE-NGKRMK 127
Query: 103 TSGSRDDNHHSKAEAEPSSV---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERA 159
SGSR +N+ SK E SS K AE++SQPPEPPK DYIHVRARRGQATDSHSLAERA
Sbjct: 128 ISGSRYENNGSKTGIEASSSGGGKSAEKSSQPPEPPK-DYIHVRARRGQATDSHSLAERA 186
Query: 160 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPG 217
RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ FLSMKLE VN+ +NP
Sbjct: 187 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGVNPA 246
Query: 218 IEVFPPKDFTQ---QTFDTAGMPFVSQATREYSRGTS--PDWLHMQIGGGFERMT 267
I FP KD Q TF+ A M F SQ+ R + P+WL M +GG +R T
Sbjct: 247 INCFPSKDVNQLAPTTFEAAAMMFASQSARGFEPAPQPHPEWLRMHLGGSLDRGT 301
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 157/202 (77%), Gaps = 7/202 (3%)
Query: 73 VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS---VKPAEQNS 129
+ED+S++ VSTS G G G + DS+ KR K S S DN + EAE S K +QN
Sbjct: 64 LEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNP 123
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLD
Sbjct: 124 PPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLD 183
Query: 190 EIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA-GMPFVSQATREY 246
EIINYIQ+LQRQ FLSMKLEAVN +N GIE FPPKDF Q ++TA G+ F Q REY
Sbjct: 184 EIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAPGLTFDPQTPREY 243
Query: 247 SRGTSP-DWLHMQIGGGFERMT 267
++G++P +WLHMQIGG +ER+T
Sbjct: 244 AQGSTPSEWLHMQIGGTYERVT 265
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 157/202 (77%), Gaps = 7/202 (3%)
Query: 73 VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS---VKPAEQNS 129
+ED+S++ VSTS G G G + DS+ KR K S S DN + EAE S K +QN
Sbjct: 23 LEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNP 82
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLD
Sbjct: 83 PPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLD 142
Query: 190 EIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA-GMPFVSQATREY 246
EIINYIQ+LQRQ FLSMKLEAVN +N GIE FPPKDF Q ++TA G+ F Q REY
Sbjct: 143 EIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAPGLTFDPQTPREY 202
Query: 247 SRGTSP-DWLHMQIGGGFERMT 267
++G++P +WLHMQIGG +ER+T
Sbjct: 203 AQGSTPSEWLHMQIGGTYERVT 224
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 154/201 (76%), Gaps = 8/201 (3%)
Query: 74 EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEP---SSVKPAEQNSQ 130
ED+S++ VSTS G G G + D + KR KT+ S ++ + E E S+ K +N
Sbjct: 56 EDDSSRIVSTS-GGGGGQDLTDLEAKRSKTNKSSNNKGSLRTEVETDSRSAGKAVSKNIP 114
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
EPPKQDYIHVRARRGQATDSHSLAERARREKISERMK+LQDLVPGCNKVIGKA VLDE
Sbjct: 115 AAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDE 174
Query: 191 IINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA-GMPFVSQATREYS 247
IINYIQSLQ Q FLSMKLEAVN + N G+EVFP KD+ QT++TA G+ F +Q +REY+
Sbjct: 175 IINYIQSLQCQVEFLSMKLEAVNAQANQGVEVFPAKDYGSQTYNTAPGLTFDTQTSREYA 234
Query: 248 RGTSP-DWLHMQIGGGFERMT 267
+GTS +WLHMQIG G+ER++
Sbjct: 235 QGTSTSEWLHMQIGSGYERVS 255
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 156/202 (77%), Gaps = 7/202 (3%)
Query: 73 VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS---VKPAEQNS 129
+ED+S++ VS S G G G + DS+ KR K S S DN + EAE S K +QN
Sbjct: 64 LEDDSSRIVSASGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNP 123
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLD
Sbjct: 124 PPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLD 183
Query: 190 EIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA-GMPFVSQATREY 246
EIINYIQ+LQRQ FLSMKLEAVN +N GIE FPPKDF Q ++TA G+ F Q REY
Sbjct: 184 EIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAPGLTFDPQTPREY 243
Query: 247 SRGTSP-DWLHMQIGGGFERMT 267
++G++P +WLHMQIGG +ER+T
Sbjct: 244 AQGSTPSEWLHMQIGGTYERVT 265
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 157/202 (77%), Gaps = 9/202 (4%)
Query: 73 VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS---VKPAEQNS 129
+ED+S++ VSTS G G G + DS+ KR K S S DN + EAE S K +QN
Sbjct: 64 LEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKS--DNSSLRTEAETDSRNASKSGDQNP 121
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLD
Sbjct: 122 PPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLD 181
Query: 190 EIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA-GMPFVSQATREY 246
EIINYIQ+LQRQ FLSMKLEAVN +N GIE FPPKDF Q ++TA G+ F Q REY
Sbjct: 182 EIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAPGLTFDPQTPREY 241
Query: 247 SRGTSP-DWLHMQIGGGFERMT 267
++G++P +WLHMQIGG +ER+T
Sbjct: 242 AQGSTPSEWLHMQIGGTYERVT 263
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 153/201 (76%), Gaps = 10/201 (4%)
Query: 74 EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAE--PSSVKPAEQNSQP 131
E++S++ VSTS G G + D + KR KT+ S ++N + EAE P S A S P
Sbjct: 56 EEDSSRIVSTS---GGGQDLTDPEAKRSKTNKSSNNNGSLRTEAETDPRSAGKAVSKSLP 112
Query: 132 P-EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
EPPKQDYIHVRARRGQATDSHSLAERARREKISERMK+LQDLVPGCNKVIGKA VLDE
Sbjct: 113 AAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDE 172
Query: 191 IINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA-GMPFVSQATREYS 247
IINYIQSLQ Q FLSMKLEAVN N G+E FP KD+ +T++TA G+ F +Q +REY+
Sbjct: 173 IINYIQSLQCQVEFLSMKLEAVNAHANQGVEAFPVKDYGAETYNTAPGLTFDTQTSREYA 232
Query: 248 RGTSP-DWLHMQIGGGFERMT 267
+GTS +WLHMQIG G+ER++
Sbjct: 233 QGTSTSEWLHMQIGSGYERVS 253
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/208 (62%), Positives = 150/208 (72%), Gaps = 8/208 (3%)
Query: 62 AHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS 121
+H + + +A V +S+ N + + KR+K GS +N KAEAE SS
Sbjct: 31 SHLTATAPTKGKDSTAADEVLSSTTTANLSNNDSGSNKRMKVGGSSFENDGFKAEAEASS 90
Query: 122 V---KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
V K +EQ+++P E PK DYIHVRARRGQATDSHSLAERARREKISERMKILQDL PGC
Sbjct: 91 VGGNKSSEQSNKPCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGC 150
Query: 179 NKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRM--NPGIEVFPPKDFTQQTFDTA 234
NKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RM NP I+ FP KD Q FD A
Sbjct: 151 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNTNPTIDGFPSKDVGTQPFDIA 210
Query: 235 GMPFVSQATREYSRGTS-PDWLHMQIGG 261
GM F SQA R Y++G+S P WLHMQIGG
Sbjct: 211 GMVFGSQAARGYAQGSSHPGWLHMQIGG 238
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 130/204 (63%), Positives = 153/204 (75%), Gaps = 10/204 (4%)
Query: 74 EDESAKHVSTSSGNGNGNRV-NDSDG---KRIKTSGSRDDNHHSKAEA---EPSSVKPAE 126
+D+ +K VSTS+ +G G DSD KR+K S D N + EA +S K A+
Sbjct: 53 DDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDSLRTEAGTDSGNSSKAAD 112
Query: 127 QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
+N+ PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA
Sbjct: 113 KNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAS 172
Query: 187 VLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDT-AGMPFVSQAT 243
VLDEIINYIQSLQ Q FLSMKLEAVN+ M GI FP KDF Q ++T AG+ F Q T
Sbjct: 173 VLDEIINYIQSLQHQVEFLSMKLEAVNSHMINGIVAFPSKDFGAQPYNTAAGLTFDPQTT 232
Query: 244 REYSRGTSPDWLHMQIGGGFERMT 267
RE+++G++ +WLHMQIG +ER+T
Sbjct: 233 REFAQGSTSEWLHMQIGNAYERVT 256
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/226 (63%), Positives = 162/226 (71%), Gaps = 13/226 (5%)
Query: 6 YNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGN 65
++ AEIWQFP +++ GGGLG + FG L Q+G D L H G
Sbjct: 22 FSLAEIWQFPA----AINGGGGGLGLRRPQFGNGLGQYGEFGPGLNRDGNGLNHA---GG 74
Query: 66 GVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPA 125
G +KRRD ED+SAK VSTS NG N VNDSDGKR K SG++++ K E E SS K A
Sbjct: 75 GGKKRRDSEDDSAKCVSTS--NGGANAVNDSDGKRTKASGNKNEGGDGKVEGEASSGKHA 132
Query: 126 EQNSQPPEPPKQD--YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 183
EQ+S+PP YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG
Sbjct: 133 EQSSKPPPSDPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 192
Query: 184 KALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFT 227
KALVLDEIINYIQSLQRQ FLSMKLEAVN+R+N GIE FPPKD +
Sbjct: 193 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDVS 238
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 153/216 (70%), Gaps = 22/216 (10%)
Query: 74 EDESAKHVSTSSGNGNGNRV-NDSDG---KRIKTSGSRDDNHHSKAEA---EPSSVKPAE 126
+D+ +K VSTS+ +G G DSD KR+K S D N + EA +S K A+
Sbjct: 53 DDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDSLRTEAGTDSGNSSKAAD 112
Query: 127 QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
+N+ PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA
Sbjct: 113 KNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAS 172
Query: 187 VLDEIINYIQSLQR--------------QFLSMKLEAVNTRMNPGIEVFPPKDFTQQTFD 232
VLDEIINYIQSLQ QFLSMKLEAVN+ M GI FP KDF Q ++
Sbjct: 173 VLDEIINYIQSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHMINGIVAFPSKDFGAQPYN 232
Query: 233 T-AGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
T AG+ F Q TRE+++G++ +WLHMQIG +ER+T
Sbjct: 233 TAAGLTFDPQTTREFAQGSTSEWLHMQIGNAYERVT 268
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 157/201 (78%), Gaps = 8/201 (3%)
Query: 74 EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS---VKPAEQNSQ 130
ED+S++ VSTS G G+ + + DS+ KR + + S DDN + +AE S K +QN
Sbjct: 44 EDDSSRPVSTSGGGGSQDLI-DSEAKRFRANKSSDDNGSFRTDAEGDSRNGSKVVDQNPP 102
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
PPEPPKQDYIHVRARRGQATDSHSLAERARREKI+ERMKILQDLVPGCNKVIGKA VLDE
Sbjct: 103 PPEPPKQDYIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDE 162
Query: 191 IINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA-GMPFVSQATREYS 247
IINY+Q+L+RQ FLSMKLEAVN +N G+E FP KDF+ TF+TA G+ F Q REY+
Sbjct: 163 IINYVQALERQVEFLSMKLEAVNAHVNNGVETFPSKDFSAPTFNTAPGLTFDPQTPREYA 222
Query: 248 RGT-SPDWLHMQIGGGFERMT 267
+G+ + +WLHMQIGG +ER+T
Sbjct: 223 QGSPASEWLHMQIGGTYERVT 243
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 139/186 (74%), Gaps = 12/186 (6%)
Query: 94 NDSDGKRIKTSG--SRDDNHHSKAEAEPSSVKPA----EQNSQPPE--PPKQDYIHVRAR 145
NDS KRI+ G S +N AE SSV + EQ+++P E PPKQDYIHVRAR
Sbjct: 63 NDSGNKRIRLGGGGSTVENGGGLKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRAR 122
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FL 203
RGQATDSHS+AERARREKISERMKILQDLVPGCNK+IGKALVLDEIINYIQSLQ Q FL
Sbjct: 123 RGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFL 182
Query: 204 SMKLEAVNTR--MNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQIGG 261
SMKLEAVN+R MNP E FP KD Q FD AG+ + S A R Y++G+ P WLHMQIGG
Sbjct: 183 SMKLEAVNSRANMNPTNEGFPSKDVVTQPFDIAGVIYESHAARGYAQGSHPGWLHMQIGG 242
Query: 262 GFERMT 267
GFE T
Sbjct: 243 GFEGAT 248
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/200 (63%), Positives = 146/200 (73%), Gaps = 17/200 (8%)
Query: 79 KHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKA-EAEPSSV---KPAEQNSQPP-- 132
+H+S S+ G+ + S SGS+D N KA E + +SV K EQ ++P
Sbjct: 36 RHLSPSTDCGSNKHIKSSG------SGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSS 89
Query: 133 -EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
+PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQD+VPGCNKVIGKALVLDEI
Sbjct: 90 EQPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEI 149
Query: 192 INYIQSLQRQ--FLSMKLEAVNTR--MNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYS 247
INYIQSLQ Q FLSMKLEAVN+R M+P IE FP K+ Q FD AG+ F SQ R Y+
Sbjct: 150 INYIQSLQHQVEFLSMKLEAVNSRLSMSPTIECFPSKEVGTQPFDLAGIIFGSQPARGYA 209
Query: 248 RGTSPDWLHMQIGGGFERMT 267
+G+ P WLHMQI GGFE+ T
Sbjct: 210 QGSQPGWLHMQIAGGFEKAT 229
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 145/200 (72%), Gaps = 17/200 (8%)
Query: 79 KHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKA-EAEPSSV---KPAEQNSQPP-- 132
+H+S S+ G+ + S SGS+D N KA E + +SV K EQ ++P
Sbjct: 36 RHLSPSTDCGSNKHIKSSG------SGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSS 89
Query: 133 -EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
+PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQD+VPGCNKVIGKALVLDEI
Sbjct: 90 EQPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEI 149
Query: 192 INYIQSLQRQ--FLSMKLEAVNTR--MNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYS 247
INYIQSLQ Q FL MKLEAVN+R M+P IE FP K+ Q FD AG+ F SQ R Y+
Sbjct: 150 INYIQSLQHQVEFLFMKLEAVNSRLSMSPIIECFPSKEVGTQPFDLAGIIFGSQPARGYA 209
Query: 248 RGTSPDWLHMQIGGGFERMT 267
+G+ P WLHMQI GGFE+ T
Sbjct: 210 QGSQPGWLHMQIAGGFEKAT 229
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 146/199 (73%), Gaps = 7/199 (3%)
Query: 75 DESAKHVSTSSGNGNGNRVNDSDGKRIKT--SGSRDDNHHSKAEAEP-SSVKPAEQNSQP 131
D+S+ VSTS G G G + D + KR+K S S D N + A+ + ++ K ++N P
Sbjct: 43 DDSSMLVSTS-GTGAGQDLADPEEKRLKKMESDSADGNLRTNAQTDSGNASKVVDRNPTP 101
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
PEPPKQDYIHVRARRGQATDSHS+AERARREKISERMK+LQDLVPGCNKVIGKA VLDEI
Sbjct: 102 PEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEI 161
Query: 192 INYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA-GMPFVSQATREYSR 248
INYIQ+LQRQ FLSMKLEAVN +N I F KD + F TA G+ Q RE+++
Sbjct: 162 INYIQALQRQVEFLSMKLEAVNAHVNNRIASFQSKDVGAEPFHTALGLTLDPQTPREHAQ 221
Query: 249 GTSPDWLHMQIGGGFERMT 267
G++ +WLHMQIG +ER+T
Sbjct: 222 GSTSEWLHMQIGNTYERVT 240
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/267 (52%), Positives = 162/267 (60%), Gaps = 41/267 (15%)
Query: 4 GSYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTN--REVSGDDPVNLEHKM 61
G +N AEIWQFP+ G S G + + G + QFG + DP + H +
Sbjct: 11 GPFNLAEIWQFPLNGV-----STAGDSSRRSFVGPN--QFGDADLTTAANGDPARMSHAL 63
Query: 62 AHG-----NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAE 116
+ +G KRR+ E +SAK VST + + + KR K D+ KAE
Sbjct: 64 SQAVIEGISGAWKRREDESKSAKIVSTIGAS-------EGENKRQKI----DEVCDGKAE 112
Query: 117 AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
AE + EQ Q EP K DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP
Sbjct: 113 AESLGTE-TEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 170
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ------ 228
GCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMNPGIEVFPPK+
Sbjct: 171 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEVMILMIINS 230
Query: 229 --QTFDTAGMPFVSQATREYSRGTSPD 253
F T F+S+ YSRG S D
Sbjct: 231 IFSIFFTKQYMFLSR----YSRGRSLD 253
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/267 (52%), Positives = 162/267 (60%), Gaps = 41/267 (15%)
Query: 4 GSYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTN--REVSGDDPVNLEHKM 61
G +N AEIWQFP+ G S G + + G + QFG + DP + H +
Sbjct: 11 GPFNLAEIWQFPLNGV-----STAGDSSRRSFVGPN--QFGDADLTTAANGDPARMSHAL 63
Query: 62 AHG-----NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAE 116
+ +G KRR+ E +SAK VST + + + KR K D+ KAE
Sbjct: 64 SQAVIEGISGAWKRREDESKSAKIVSTIGAS-------EGENKRQKI----DEVCDGKAE 112
Query: 117 AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
AE + EQ Q EP K DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP
Sbjct: 113 AESLGTE-TEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 170
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ------ 228
GCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMNPGIEVFPPK+
Sbjct: 171 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEVMILMIINS 230
Query: 229 --QTFDTAGMPFVSQATREYSRGTSPD 253
F T F+S+ YSRG S D
Sbjct: 231 IFSIFFTKQYMFLSR----YSRGRSLD 253
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 141/267 (52%), Positives = 162/267 (60%), Gaps = 41/267 (15%)
Query: 4 GSYNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTN--REVSGDDPVNLEHKM 61
G +N AEIWQFP+ G S G + + G + QFG + DP + H +
Sbjct: 5 GPFNLAEIWQFPLNGV-----STAGDSSRRSFVGPN--QFGDADLTTAANGDPARMSHAL 57
Query: 62 AHG-----NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAE 116
+ +G KRR+ E +SAK VST + + + KR K D+ KAE
Sbjct: 58 SQAVIEGISGAWKRREDESKSAKIVSTIGAS-------EGENKRQKI----DEVCDGKAE 106
Query: 117 AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
AE + EQ Q EP K DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP
Sbjct: 107 AESLGTE-TEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 164
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ------ 228
GCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+RMNPGIEVFPPK+
Sbjct: 165 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEVMILMIINS 224
Query: 229 --QTFDTAGMPFVSQATREYSRGTSPD 253
F T F+S+ YSRG S D
Sbjct: 225 IFSIFFTKQYMFLSR----YSRGRSLD 247
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 226 FTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQIG-GGFERMT 267
F QQ F+ + F SQ+TREYSRG SP+WLHMQIG GGFER +
Sbjct: 306 FGQQAFENPEIQFGSQSTREYSRGASPEWLHMQIGSGGFERTS 348
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/135 (78%), Positives = 114/135 (84%), Gaps = 4/135 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ
Sbjct: 86 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 145
Query: 197 SLQRQ--FLSMKLEAVNTR--MNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSP 252
SLQ Q FLSMKLEAVN+R MNP I+ F KD Q FD AG+ F SQA+R Y++G+ P
Sbjct: 146 SLQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDVGTQPFDLAGIIFGSQASRGYAQGSQP 205
Query: 253 DWLHMQIGGGFERMT 267
WLHMQI GGFE+ T
Sbjct: 206 GWLHMQITGGFEKTT 220
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 131/187 (70%), Gaps = 17/187 (9%)
Query: 94 NDSDGKRIKTSG--SRDDNHHSKA-EAEPSSVKPAEQNSQPPEP------PKQDYIHVRA 144
+ + K IK S S+D N K E + +SV + Q P+P PKQDYIHVRA
Sbjct: 42 DSASNKHIKLSAPESQDQNGALKVGEVDATSVAGNKLPQQTPKPSSSEQAPKQDYIHVRA 101
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--F 202
RRGQATD+HSLAERARREKISERMKILQDLVPGCNKVIGKA VLD IINY+QSLQRQ F
Sbjct: 102 RRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQRQVEF 161
Query: 203 LSMKLEAVNTR--MNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQIG 260
LSMKLEAV++R M P +E FP K+ Q AG+ F SQ + Y++G+ WLHMQI
Sbjct: 162 LSMKLEAVSSRLSMKPTLECFPSKEVCTQ----AGIIFGSQPAKGYAQGSQMGWLHMQIA 217
Query: 261 GGFERMT 267
GGFE+ T
Sbjct: 218 GGFEKAT 224
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 105/133 (78%), Gaps = 3/133 (2%)
Query: 138 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 197
DYIHVRARRGQATDSHSLAERARREKISERMK+LQD+VPGCNKVIGKA VLDEIINYIQS
Sbjct: 46 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 105
Query: 198 LQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA-GMPFVSQATREYSRGTSPDW 254
LQRQ FLSMKLE +N MN FP KDF ++TA + Q REY++G+ DW
Sbjct: 106 LQRQVEFLSMKLETINAHMNNATVAFPTKDFGAPPYNTAPSLTLDPQTPREYAQGSMSDW 165
Query: 255 LHMQIGGGFERMT 267
LHMQIG +ER+T
Sbjct: 166 LHMQIGNAYERVT 178
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 126/177 (71%), Gaps = 4/177 (2%)
Query: 95 DSDGKRIK-TSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSH 153
D + KR+K + S ++ ++AE + + P+ P +DYIHVRARRGQATDSH
Sbjct: 75 DPEAKRLKQIAPSEKNDRRTEAETNSGNASKSADKKPAPKEPPKDYIHVRARRGQATDSH 134
Query: 154 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
SLAERARREKISERMK+LQD+VPGCNKVIGKA VLDEIINYIQSLQRQ FLSMKLEA+N
Sbjct: 135 SLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSMKLEAIN 194
Query: 212 TRMNPGIEVFPPKDFTQQTFDTA-GMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
++ FP KDF ++TA + Q REY++G+ DWLHMQ+G +ER+T
Sbjct: 195 AHVSNATVAFPTKDFGVAPYNTAPSLTLDPQTPREYAQGSMSDWLHMQVGNAYERVT 251
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 155/274 (56%), Gaps = 21/274 (7%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLG-QKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAH 63
SY +EIW FPV SG L G F + S+ N++VS + + A
Sbjct: 18 SYTLSEIWPFPV---NDAVRSGLRLAVNSGRVFTR--SEHSGNKDVSAAEESTVTDLTA- 71
Query: 64 GNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV- 122
G G RK RD+ E S + +GN + +S K+ K GS N E +
Sbjct: 72 GWGSRKTRDLNSED-DSSKMVSSSSSGNELKESGDKKRKLCGSESGNGDGSMRPEGETSS 130
Query: 123 -----KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 177
K EQ ++P EPPK DYIHVRARRGQATD HSLAERARREKISE+M LQD++PG
Sbjct: 131 GGGGSKATEQKNKP-EPPK-DYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPG 188
Query: 178 CNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT--RMNPGIEVFPPKDFTQQTFDT 233
CNK+IGKALVLDEIINYIQSLQRQ FLSMKLE VN+ P I VFP D D
Sbjct: 189 CNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFPSGDLGTLPIDV 248
Query: 234 AGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
+ Q E +R + P+WLHMQ+ G F R T
Sbjct: 249 HRTIYEQQEANE-TRVSQPEWLHMQVDGNFNRTT 281
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 155/275 (56%), Gaps = 22/275 (8%)
Query: 5 SYNFAEIWQFPVPGSGSMSESGGGLG-QKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAH 63
SY +EIW FPV SG L G F + S+ N++VS + + A
Sbjct: 18 SYTLSEIWPFPV---NDAVRSGLRLAVNSGRVFTR--SEHSGNKDVSAAEESTVTDLTA- 71
Query: 64 GNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV- 122
G G RK RD+ E S + +GN + +S K+ K GS N E +
Sbjct: 72 GWGGRKTRDLNSED-DSSKMVSSSSSGNELKESGDKKRKLCGSESGNGDGSMRPEGETSS 130
Query: 123 ------KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
K EQ ++P EPPK DYIHVRARRGQATD HSLAERARREKISE+M LQD++P
Sbjct: 131 GGGGGSKATEQKNKP-EPPK-DYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIP 188
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT--RMNPGIEVFPPKDFTQQTFD 232
GCNK+IGKALVLDEIINYIQSLQRQ FLSMKLE VN+ P I VFP D D
Sbjct: 189 GCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFPSGDLGTLPID 248
Query: 233 TAGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
+ Q E +R + P+WLHMQ+ G F R T
Sbjct: 249 VHRTIYEQQEANE-TRVSQPEWLHMQVDGNFNRTT 282
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 141/210 (67%), Gaps = 21/210 (10%)
Query: 66 GVRKRRDVEDESAK-HVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS--- 121
G RKRR + ++ A+ H ST + N N+S KR K++ + +N SK++AE +
Sbjct: 134 GGRKRRTLPNDKARFHDSTFTSPSEKNTENESKSKRPKSAEAMKENDDSKSDAEQRTHTG 193
Query: 122 ---VKP--AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
V P +EQ+++PPEPPK DYIHVRARRGQATD HSLAER RREKI ERMK+LQDLVP
Sbjct: 194 RPEVNPRQSEQSAKPPEPPK-DYIHVRARRGQATDRHSLAERVRREKIGERMKLLQDLVP 252
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA 234
GCNK+ GKA+++DEIINY+QSLQ Q FLSMKLEAVN ++ +E F +D + +F+TA
Sbjct: 253 GCNKITGKAVMVDEIINYVQSLQCQVEFLSMKLEAVNPKLACNMEGFLARDMLEPSFNTA 312
Query: 235 GMPFVSQATREYSRGTSPDWLHMQIGGGFE 264
+ Y + P+WL MQ+G E
Sbjct: 313 ---------KAYPQFHQPEWLAMQVGTSCE 333
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/102 (85%), Positives = 92/102 (90%), Gaps = 2/102 (1%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ FLSMKLEAVN+R+N GIE PPKD
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEASPPKD 60
Query: 226 FTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQIGGGFERMT 267
+ QQTFD AGMPFVSQATRE SRG SP+WLHMQ+GGGFER T
Sbjct: 61 YGQQTFDLAGMPFVSQATREPSRGFSPEWLHMQVGGGFERTT 102
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 150/261 (57%), Gaps = 32/261 (12%)
Query: 7 NFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGNG 66
F E W F V + + GQ ++ N +SG + + + G
Sbjct: 20 TFTEFWPFSVNYDVRLP----------LNSGQDF-RYSGNSYISGAEESTVTEQTGGG-- 66
Query: 67 VRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHS-KAEAEPSS-- 121
RKRR + +DES+K + +S + N R+ +S K++K S + + E E SS
Sbjct: 67 -RKRRALTSQDESSKMMFSSCTSVN--RLKESSKKKMKVCLSEGETEDGLRREGETSSGG 123
Query: 122 -VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
K E+ S P +DYIHVRARRGQATD HSLAERARREKISERMK LQDL+PGCNK
Sbjct: 124 GSKETEEKS-----PLKDYIHVRARRGQATDRHSLAERARREKISERMKFLQDLIPGCNK 178
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN--PGIEVFPPKDFTQQTFDTAGM 236
+IGKALVLDEIINYIQSLQRQ FLSMKLE VN+ ++ P + +FP D +
Sbjct: 179 IIGKALVLDEIINYIQSLQRQVEFLSMKLEIVNSDVSNGPKVGMFPSGDLNTLPIEVQRT 238
Query: 237 PFVSQATREYSRGTSPDWLHM 257
F Q E SRG+ PDWLHM
Sbjct: 239 MFDQQEADE-SRGSQPDWLHM 258
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 130/210 (61%), Gaps = 16/210 (7%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRV-NDSDGKRIK-TSGSRDDNHHSKAEAE------- 118
RKR+ AK STS+ +DS+ KR K G ++N KAE E
Sbjct: 303 RKRKGPSKGKAKETSTSTNPPMAAEASDDSNAKRSKPNEGEGNENGQVKAEEESKGGNNS 362
Query: 119 -PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 177
+ K + NS+PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPG
Sbjct: 363 NANDEKQNKSNSKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 421
Query: 178 CNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAG 235
CNKV GKAL+LDEIINY+QSLQRQ FLSMKL +VNTR++ IE KD Q A
Sbjct: 422 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIESLISKDIFQSNNSLAQ 481
Query: 236 --MPFVSQATREYSRGTSPD-WLHMQIGGG 262
P S A Y + T P+ +H I G
Sbjct: 482 PIFPIDSSAPPFYGQQTQPNPAIHNNIPNG 511
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 121/172 (70%), Gaps = 10/172 (5%)
Query: 68 RKRRDVEDESAKHVST---SSGNGNGNRVNDSDGKRIKTS-GSRDDNHHSKAEAEPSSVK 123
RKR+ + AK ++ +S + ++S+ KRIK + G ++N KAE EP
Sbjct: 278 RKRKALSKGKAKQSASNPPASATKDAETDDNSNTKRIKPNEGEENENSPVKAEEEPKGSG 337
Query: 124 PAEQN---SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
QN S+PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNK
Sbjct: 338 DDIQNKANSRPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 396
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQT 230
V GKAL+LDEIINY+QSLQRQ FLSMKL +VNTR++ ++ KD Q +
Sbjct: 397 VTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNMDTLISKDIFQSS 448
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 115/168 (68%), Gaps = 15/168 (8%)
Query: 67 VRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIK---TSGSRDDNHHSKAEAEPSSVK 123
RKR+ V+ AK V + N ++ +GK+IK + D KAEA+ S
Sbjct: 279 TRKRKSVQTGQAKDVKAAVEN------HEPNGKKIKPDEVTKKEIDGAKGKAEAKSSGDA 332
Query: 124 PAEQN---SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
+QN S+PPEPPK DYIHVRARRGQATDSHSLAER RREKIS+RMK LQDLVPGCNK
Sbjct: 333 NQKQNNDSSKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNK 391
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
V GKA++LDEIINY+QSLQRQ FLSMKL VN RM+ +E PKD
Sbjct: 392 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMETLVPKDI 439
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/112 (75%), Positives = 92/112 (82%), Gaps = 3/112 (2%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
NS+PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+
Sbjct: 326 NSKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 384
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
LDEIINY+QSLQRQ FLSMKL +VNTRM+ IE KD Q A +P
Sbjct: 385 LDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIENLISKDVFQSNNSLATLP 436
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/115 (73%), Positives = 93/115 (80%), Gaps = 3/115 (2%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
++ NS+PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GK
Sbjct: 356 SKSNSKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 414
Query: 185 ALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
AL+LDEIINY+QSLQRQ FLSMKL +VNTRM+ IE KD Q A P
Sbjct: 415 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIESLVTKDVFQSNNSLATHP 469
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 129/196 (65%), Gaps = 10/196 (5%)
Query: 32 KGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGN--GVRKRRDVEDESAKHVSTSSGNGN 89
+ A FG + + ++ G + L K+ + N VRKR+ + AK +SS + +
Sbjct: 236 ENAEFGDSREESSLSEQIPGGE---LSIKVQNNNDFSVRKRKAIPRGKAKETPSSSPSAS 292
Query: 90 GNRVN-DSDGKRIKTSGSRDDNHHSKAEAEPS-SVKPAEQNSQPPEPPKQDYIHVRARRG 147
+V + D K S S + N H KA+AE + + K + N++ PEPPK DYIHVRARRG
Sbjct: 293 DVKVAAEKDESTAKRSKSDEANGHDKAKAEQNGNQKQNKDNTKLPEPPK-DYIHVRARRG 351
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
QATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQ FLSM
Sbjct: 352 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 411
Query: 206 KLEAVNTRMNPGIEVF 221
KL VN RM+ +E
Sbjct: 412 KLATVNPRMDVNMEAL 427
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 120/181 (66%), Gaps = 11/181 (6%)
Query: 57 LEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRV----NDSDGKRIK---TSGSRDD 109
L K + RKR+ + AK +SS + + +V ++S KR K T+GS D
Sbjct: 279 LSMKSQNDANSRKRKSIPRGKAKETPSSSPSASDVKVAAENDESKAKRSKSDETNGSDKD 338
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
K E E + K + NS+PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK
Sbjct: 339 TAKEKEE-ENGNQKQNKNNSKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMK 396
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFT 227
LQDLVPGCNKV GKA++LDEIINY+QSLQRQ FLSMKL +VN RM +E KD
Sbjct: 397 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSSVNPRMEINMETLLSKDIF 456
Query: 228 Q 228
Q
Sbjct: 457 Q 457
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 112/166 (67%), Gaps = 20/166 (12%)
Query: 95 DSDGKRIK-TSGSRDDNHHSKAEAE-------PSSVKPAEQNSQPPEPPKQDYIHVRARR 146
D + KR K +G ++N KAE E + K + NS+PPEPPK DYIHVRARR
Sbjct: 331 DWNAKRSKPNAGEGNENGQVKAEEESKGGNSNANDEKQNKSNSKPPEPPK-DYIHVRARR 389
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLS 204
GQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ FLS
Sbjct: 390 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 449
Query: 205 MKLEAVNTRMNPGIEVFPPKDFTQQT---------FDTAGMPFVSQ 241
MKL +VNTR++ IE KD Q D++ PF Q
Sbjct: 450 MKLASVNTRLDFSIESLISKDIFQSNNSLAHPIFLIDSSAPPFYGQ 495
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 119/175 (68%), Gaps = 24/175 (13%)
Query: 68 RKRRDVEDESAK---HVSTSSGNGNGNRVNDSDGKRIKTSGSRDDN-HHSKAEAE----- 118
RKRR + ++ K TSSG +G +V GKR + +++++ H +A+
Sbjct: 291 RKRRTLSEDKLKDGSSCVTSSGIKDGEQVK---GKRQRNPNAKEESKQHGNGKADRSSSD 347
Query: 119 ------PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 172
P SVK +N++PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQ
Sbjct: 348 NSGSTSPKSVK---ENTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQ 403
Query: 173 DLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
DLVPGCNKV GKA++LDEIINY+QSLQRQ FLSMKL AVN R+ +E K+
Sbjct: 404 DLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVESLLGKE 458
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/163 (61%), Positives = 110/163 (67%), Gaps = 30/163 (18%)
Query: 94 NDSDGKRIKTSGSRDDNHHSKA----EAEPSSVKPA----EQNSQPPE--PPKQDYIHVR 143
NDS KRI+ G + AE SSV + EQ+++P E PPKQDYIHVR
Sbjct: 66 NDSGNKRIRLGGGGSTVENGGGGGLKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVR 125
Query: 144 ARRGQATDSHSLAER----------------ARREKISERMKILQDLVPGCNKVIGKALV 187
ARRGQATDSHS+AER ARREKISERMKILQDLVPGCNK+IGKALV
Sbjct: 126 ARRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQDLVPGCNKMIGKALV 185
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTR--MNPGIEVFPPKDF 226
LDEIINYIQSLQ Q FLSMKLEAVN+R +NP E FP KDF
Sbjct: 186 LDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTNEGFPSKDF 228
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 113/168 (67%), Gaps = 10/168 (5%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ 127
+KR+ +K + + ++S+ KR K + D KAE E +Q
Sbjct: 278 KKRKTAPKAKSKEAPQPNSAKDAEVDDNSNAKRSKGNEKND----VKAEEEHKGNGDDKQ 333
Query: 128 N---SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
N ++PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GK
Sbjct: 334 NKASTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 392
Query: 185 ALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQT 230
AL+LDEIINY+QSLQRQ FLSMKL +VNTR++ ++ KD Q T
Sbjct: 393 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDINLDTLMSKDIFQTT 440
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/135 (65%), Positives = 102/135 (75%), Gaps = 11/135 (8%)
Query: 95 DSDGKRIKTS-GSRDDNHHSKAEAEPSSVKP----AEQN---SQPPEPPKQDYIHVRARR 146
D + K+IK + G R++N E E P +QN S+PPEP K DYIHVRARR
Sbjct: 237 DFNAKKIKANEGERNENGVRNMEEEIKEGTPNAGEEKQNKSDSKPPEPQK-DYIHVRARR 295
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLS 204
GQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ FLS
Sbjct: 296 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 355
Query: 205 MKLEAVNTRMNPGIE 219
MKL +VNT+M+ IE
Sbjct: 356 MKLSSVNTKMDLSIE 370
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 87/102 (85%), Gaps = 3/102 (2%)
Query: 129 SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
S+PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+L
Sbjct: 278 SKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 336
Query: 189 DEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
DEIINY++SLQRQ FLSMKL +VNTR++ E KD Q
Sbjct: 337 DEIINYVRSLQRQVEFLSMKLSSVNTRLDFSTESLISKDIFQ 378
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/115 (71%), Positives = 90/115 (78%), Gaps = 3/115 (2%)
Query: 116 EAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 175
E E + K + NS PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLV
Sbjct: 2 EEENGNHKQKKDNSNPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 60
Query: 176 PGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
PGCNKV GKA++LDEIINY+QSLQRQ FLSMK+ VN +M +E F KD Q
Sbjct: 61 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKMATVNPKMEINMETFLSKDIFQ 115
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/95 (80%), Positives = 86/95 (90%), Gaps = 2/95 (2%)
Query: 127 QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
+NS+PPEPPKQDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA+
Sbjct: 1 ENSKPPEPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 60
Query: 187 VLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
+LDEIINY+QSLQRQ FLSMKL AVN R++ ++
Sbjct: 61 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDINLD 95
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 116/191 (60%), Gaps = 16/191 (8%)
Query: 48 EVSGDD----PVNLEHK----MAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGK 99
E SG D P LE G G RKR+ S + NG + S
Sbjct: 273 ECSGGDGLGEPCTLEATGKELSTKGLGTRKRK----RSGQKTELDQANGPLQQTTVSPKD 328
Query: 100 RIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERA 159
+T RD N +S A + K +Q SQP +PPK++YIHVRARRGQAT+SHSLAER
Sbjct: 329 DAETQRKRDQNPNSTANK--GTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERV 386
Query: 160 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPG 217
RREKISERMK LQ+LVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN R++
Sbjct: 387 RREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDIN 446
Query: 218 IEVFPPKDFTQ 228
I+ KD Q
Sbjct: 447 IDGVVAKDILQ 457
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/103 (77%), Positives = 88/103 (85%), Gaps = 6/103 (5%)
Query: 119 PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
P SVK +N++PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC
Sbjct: 39 PKSVK---ENTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 94
Query: 179 NKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
NKV GKA++LDEIINY+QSLQRQ FLSMKL AVN R+ +E
Sbjct: 95 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVE 137
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/243 (44%), Positives = 140/243 (57%), Gaps = 27/243 (11%)
Query: 41 SQFGTNRE-------VSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRV 93
++F T RE ++G +P + +G RKRR + AK ++ + G
Sbjct: 286 AEFSTGREESSCSDQIAGREPGSKTLNEVNG---RKRRVLSKAKAKDTPSAVASSGGRET 342
Query: 94 -----NDSDGKRIKTS--GSRD-DNHHSKAEAEP------SSVKPAEQNSQPPEPPKQDY 139
++S KR K + GS + D+ SKAE SS K + + PEPPK DY
Sbjct: 343 KSLEADESPTKRYKGAEVGSNEKDDAKSKAEQSTILSTGESSPKQTKDIVKTPEPPK-DY 401
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
IHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQ
Sbjct: 402 IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 461
Query: 200 RQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHM 257
RQ FLSMKL VN R++ ++ KD Q + M F + T + + P +
Sbjct: 462 RQVEFLSMKLATVNPRLDFNMDGLIAKDMLQSHGSSPRMLFSTDPTAAFPQLHQPQQGPV 521
Query: 258 QIG 260
Q+G
Sbjct: 522 QVG 524
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 135/242 (55%), Gaps = 23/242 (9%)
Query: 4 GSYNFAEIWQFPVPGS-------GSMSESGG--GLGQKGAHFGQHLSQFGT---NREVSG 51
G+ +A P PGS M+E G G ++ A F S FG+ N +
Sbjct: 107 GNSCYATPMSSPPPGSMMETKTTTPMAELSGDPGFAERAARF----SCFGSRSFNSRTNS 162
Query: 52 DDPVNLEHKMAHGNGVRKRRD--VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSG-SRD 108
P+N E + + + V A HV +G +R + K+ S S
Sbjct: 163 PFPINNEPPITTNEKMPRVSSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSS 222
Query: 109 DNHHSKAEAEPSSVKPAEQNSQPPEP--PKQDYIHVRARRGQATDSHSLAERARREKISE 166
K +++P K +E+N + P +DYIHVRARRGQATDSHSLAER RREKISE
Sbjct: 223 KEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISE 282
Query: 167 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPK 224
RMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ FLSMKL +VNTR++ ++ K
Sbjct: 283 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSK 342
Query: 225 DF 226
D
Sbjct: 343 DI 344
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 135/242 (55%), Gaps = 23/242 (9%)
Query: 4 GSYNFAEIWQFPVPGS-------GSMSESGG--GLGQKGAHFGQHLSQFGT---NREVSG 51
G+ +A P PGS M+E G G ++ A F S FG+ N +
Sbjct: 107 GNSCYATPMSSPPPGSMMETKTTTPMAELSGDPGFAERAARF----SCFGSRSFNSRTNS 162
Query: 52 DDPVNLEHKMAHGNGVRKRRD--VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSG-SRD 108
P+N E + + + V A HV +G +R + K+ S S
Sbjct: 163 PFPINNEPPITTNEKMPRVSSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSS 222
Query: 109 DNHHSKAEAEPSSVKPAEQNSQPPEP--PKQDYIHVRARRGQATDSHSLAERARREKISE 166
K +++P K +E+N + P +DYIHVRARRGQATDSHSLAER RREKISE
Sbjct: 223 KEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISE 282
Query: 167 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPK 224
RMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ FLSMKL +VNTR++ ++ K
Sbjct: 283 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSK 342
Query: 225 DF 226
D
Sbjct: 343 DI 344
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 135/242 (55%), Gaps = 23/242 (9%)
Query: 4 GSYNFAEIWQFPVPGS-------GSMSESGG--GLGQKGAHFGQHLSQFGT---NREVSG 51
G+ +A P PGS M+E G G ++ A F S FG+ N +
Sbjct: 101 GNSCYATPMSSPPPGSMMETKTTTPMAELSGDPGFAERAARF----SCFGSRSFNSRTNS 156
Query: 52 DDPVNLEHKMAHGNGVRKRRD--VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSG-SRD 108
P+N E + + + V A HV +G +R + K+ S S
Sbjct: 157 PFPINNEPPITTNEKMPRVSSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSS 216
Query: 109 DNHHSKAEAEPSSVKPAEQNSQPPEP--PKQDYIHVRARRGQATDSHSLAERARREKISE 166
K +++P K +E+N + P +DYIHVRARRGQATDSHSLAER RREKISE
Sbjct: 217 KEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISE 276
Query: 167 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPK 224
RMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ FLSMKL +VNTR++ ++ K
Sbjct: 277 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSK 336
Query: 225 DF 226
D
Sbjct: 337 DI 338
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 109/167 (65%), Gaps = 8/167 (4%)
Query: 64 GNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVK 123
G G RKR+ S + NG + S +T RD N +S A + K
Sbjct: 253 GLGTRKRK----RSGQKTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANK--GTGK 306
Query: 124 PAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 183
+Q SQP +PPK++YIHVRARRGQAT+SHSLAER RREKISERMK LQ+LVPGC+KV G
Sbjct: 307 HGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTG 366
Query: 184 KALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
KA++LDEIINY+QSLQRQ FLSMKL VN R++ I+ KD Q
Sbjct: 367 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGVVAKDILQ 413
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 87/101 (86%), Gaps = 4/101 (3%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
N++PPEPPK DYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGCNKV GKAL+
Sbjct: 288 NTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALM 346
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVN-TRMNPGIEVFPPKD 225
LDEIINY+QSLQRQ FLSMKL +VN TR++ ++ KD
Sbjct: 347 LDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKD 387
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 87/101 (86%), Gaps = 4/101 (3%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
N++PPEPPK DYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGCNKV GKAL+
Sbjct: 288 NTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALM 346
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVN-TRMNPGIEVFPPKD 225
LDEIINY+QSLQRQ FLSMKL +VN TR++ ++ KD
Sbjct: 347 LDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKD 387
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/112 (71%), Positives = 91/112 (81%), Gaps = 5/112 (4%)
Query: 119 PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
PSS+K + ++ Q PKQDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC
Sbjct: 52 PSSLKASSKSVQ--NLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 109
Query: 179 NKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
+KV GKA++LDEIINY+QSLQRQ FLSMKL AVN R++ G +V KD Q
Sbjct: 110 SKVTGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDYGFDVL-GKDLLQ 160
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 112/176 (63%), Gaps = 16/176 (9%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSD---GKRIKT---SGSRDDN-------HHSK 114
RKR+ + AK V +S + +D D KR K SGS D + S
Sbjct: 286 RKRKSIPRGKAKEVPSSPSAKDAKVASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGST 345
Query: 115 AEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 174
A + K ++ N +PPE PK DYIHVRARRGQATDSHSLAER RREKISERMK LQDL
Sbjct: 346 KSAGDGNQKQSKDNPKPPEAPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 404
Query: 175 VPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
VPGCNKV GKA++LDEIINY+QSLQRQ FLSMKL VN RM+ +E K+ Q
Sbjct: 405 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQ 460
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 112/176 (63%), Gaps = 16/176 (9%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSD---GKRIKT---SGSRDDN-------HHSK 114
RKR+ + AK V +S + +D D KR K SGS D + S
Sbjct: 286 RKRKSIPRGKAKEVPSSPSAKDAKVASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGST 345
Query: 115 AEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 174
A + K ++ N +PPE PK DYIHVRARRGQATDSHSLAER RREKISERMK LQDL
Sbjct: 346 KSAGDGNQKQSKDNPKPPEAPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 404
Query: 175 VPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
VPGCNKV GKA++LDEIINY+QSLQRQ FLSMKL VN RM+ +E K+ Q
Sbjct: 405 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQ 460
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 109/151 (72%), Gaps = 10/151 (6%)
Query: 87 NGNGNRVNDSDGKRIKTSGSRDD-NHHSKAEAEPSSV-----KPAEQNSQPPEPPKQDYI 140
+G+ ++ N + + + + G+ D+ + K + +P+S K A+ SQ +PPK++YI
Sbjct: 162 DGDNDKANGA--QELPSEGAEDNYENQQKGDHQPTSTAKASGKNAKLGSQASDPPKEEYI 219
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
HVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQR
Sbjct: 220 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 279
Query: 201 Q--FLSMKLEAVNTRMNPGIEVFPPKDFTQQ 229
Q FLSMKL VN R++ IE KD QQ
Sbjct: 280 QVEFLSMKLATVNPRLDFNIEGLLAKDILQQ 310
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 112/176 (63%), Gaps = 16/176 (9%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSD---GKRIKT---SGSRDDN-------HHSK 114
RKR+ + AK V +S + +D D KR K SGS D + S
Sbjct: 177 RKRKSIPRGKAKEVPSSPSAKDAKVASDKDESNAKRSKPDEGSGSEKDAAKAKAEANGST 236
Query: 115 AEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 174
A + K ++ N +PPE PK DYIHVRARRGQATDSHSLAER RREKISERMK LQDL
Sbjct: 237 KSAGDGNQKQSKDNPKPPEAPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 295
Query: 175 VPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
VPGCNKV GKA++LDEIINY+QSLQRQ FLSMKL VN RM+ +E K+ Q
Sbjct: 296 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQ 351
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 120/205 (58%), Gaps = 38/205 (18%)
Query: 37 GQHLS-------------QFGTNREVSG-DDPVNLEHKMAHGNGVRKRRDVEDESAKHVS 82
GQHL+ +FG +RE S DP + M N +++ AK S
Sbjct: 60 GQHLAPGLLGMLPPAPGGEFGGSREASSVSDPAS---AMKDANAKKRKAPASKGKAKEPS 116
Query: 83 TSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEP--------SSVKPAEQ------N 128
S+ G + D KR +T D + A P SSV+ EQ N
Sbjct: 117 LSTSCQVGEH-KEPDAKRCRTG---DAEKKAAAPVRPKAEQAGSDSSVEDGEQRKGKGKN 172
Query: 129 SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
++P EPPK DY+HVRARRGQATDSHSLAER RRE+IS+RMK LQDLVPGCNKVIGKAL+L
Sbjct: 173 AKPVEPPK-DYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALML 231
Query: 189 DEIINYIQSLQRQ--FLSMKLEAVN 211
DEIINY+QSLQRQ FLSMKL VN
Sbjct: 232 DEIINYVQSLQRQVEFLSMKLATVN 256
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 102/146 (69%), Gaps = 2/146 (1%)
Query: 89 NGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQ 148
NG + S+G + + + + + A + K A+ SQ +PPK++YIHVRARRGQ
Sbjct: 305 NGAQELPSEGAKGNSENQQKGDQQPISTANKACGKNAKLGSQASDPPKEEYIHVRARRGQ 364
Query: 149 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMK 206
AT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMK
Sbjct: 365 ATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 424
Query: 207 LEAVNTRMNPGIEVFPPKDFTQQTFD 232
L VN R++ IE KD QQ D
Sbjct: 425 LATVNPRLDFNIEGLLAKDILQQRPD 450
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 107/158 (67%), Gaps = 15/158 (9%)
Query: 95 DSDGKRIKT-SGSRDDNHHSKAE--AEPSSVK---------PAEQNSQPPEPPKQDYIHV 142
+SDGKR KT +G ++ + KAE SSV+ +N++P EPPK DY+HV
Sbjct: 146 ESDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPK-DYVHV 204
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ- 201
RARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQ
Sbjct: 205 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 264
Query: 202 -FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
FLSMKL VN + KD Q +A F
Sbjct: 265 EFLSMKLATVNPLDFSNLPTLLQKDMLQACGPSASSVF 302
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 113/165 (68%), Gaps = 22/165 (13%)
Query: 95 DSDGKRIKTS----GSRDDNHHSKAEAEPSSVKPAEQN-----SQPPEPPKQDYIHVRAR 145
+S GKR K++ G+ +++ KA A+ +S ++ S+PPEPPK DYIHVRAR
Sbjct: 197 ESSGKRCKSAEESNGAEENSGKGKAAAQSNSDNGGKKQGKDGASKPPEPPK-DYIHVRAR 255
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FL 203
RG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQ FL
Sbjct: 256 RGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 315
Query: 204 SMKLEAVNTRMN-PGIEVFPPKDFTQQT---------FDTAGMPF 238
SMKL VN +++ + PKD Q +T+G P
Sbjct: 316 SMKLATVNPQLDFNNLPNLLPKDMHQSCGPLQNSHFPLETSGAPL 360
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 97/126 (76%), Gaps = 8/126 (6%)
Query: 111 HHSKAEAEPSSV--KPA----EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 164
+ K PSS KPA +Q+SQP + PK++YIHVRARRGQAT+SHSLAER RREKI
Sbjct: 304 NQQKGGQNPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKI 363
Query: 165 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFP 222
SERM++LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN R++ IE
Sbjct: 364 SERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELL 423
Query: 223 PKDFTQ 228
K+F Q
Sbjct: 424 TKEFIQ 429
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 97/126 (76%), Gaps = 8/126 (6%)
Query: 111 HHSKAEAEPSSV--KPA----EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 164
+ K PSS KPA +Q+SQP + PK++YIHVRARRGQAT+SHSLAER RREKI
Sbjct: 304 NQQKGGQNPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKI 363
Query: 165 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFP 222
SERM++LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN R++ IE
Sbjct: 364 SERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELL 423
Query: 223 PKDFTQ 228
K+F Q
Sbjct: 424 TKEFIQ 429
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 111/168 (66%), Gaps = 15/168 (8%)
Query: 95 DSDGKRIKT-SGSRDDNHHSKAE--AEPSSVK---------PAEQNSQPPEPPKQDYIHV 142
+SDGKR KT +G ++ + KAE SSV+ +N++P EPPK DY+HV
Sbjct: 146 ESDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPK-DYVHV 204
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ- 201
RARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQ
Sbjct: 205 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 264
Query: 202 -FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSR 248
FLSMKL VN + KD Q +A F +++ R
Sbjct: 265 EFLSMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVFSLESSNSAFR 312
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 107/158 (67%), Gaps = 15/158 (9%)
Query: 95 DSDGKRIKT-SGSRDDNHHSKAE--AEPSSVK---------PAEQNSQPPEPPKQDYIHV 142
+SDGKR KT +G ++ + KAE SSV+ +N++P EPPK DY+HV
Sbjct: 146 ESDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGSGGGQKQGKGKNAKPVEPPK-DYVHV 204
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ- 201
RARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQ
Sbjct: 205 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 264
Query: 202 -FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
FLSMKL VN + KD Q +A F
Sbjct: 265 EFLSMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVF 302
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 86/100 (86%), Gaps = 4/100 (4%)
Query: 129 SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
++PPEPPK DYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGCNKV GKAL+L
Sbjct: 287 TKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALML 345
Query: 189 DEIINYIQSLQRQ--FLSMKLEAVN-TRMNPGIEVFPPKD 225
DEIINY+QSLQRQ FLSMKL +VN TR++ ++ KD
Sbjct: 346 DEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKD 385
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 120/203 (59%), Gaps = 22/203 (10%)
Query: 33 GAHFGQHLSQFGTNRE--VSGDDPVNLEHK---MAHGNGVRKR-RDVEDESAKHVSTSSG 86
G F + QFG++RE V G P E + + V R + S K S SG
Sbjct: 67 GIRFPPYPGQFGSDREFGVLGSQPTTQESNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSG 126
Query: 87 NGN----GNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ---------NSQPPE 133
NG + + S+ K +G SK + SS E+ +++PPE
Sbjct: 127 NGKESPASSSLTASNSKVSGENGGSKGGKRSKQDEAGSSKNGVEKCDSKGDNKDDAKPPE 186
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
PK DYIHVRARRGQATDSHSLAERARREKISERM +LQDLVPGCN++ GKA++LDEIIN
Sbjct: 187 APK-DYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIIN 245
Query: 194 YIQSLQRQ--FLSMKLEAVNTRM 214
Y+QSLQRQ FLSMKL VN RM
Sbjct: 246 YVQSLQRQVEFLSMKLATVNPRM 268
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 100/142 (70%), Gaps = 9/142 (6%)
Query: 114 KAEAEPSSV------KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISER 167
K + PSSV K +Q +Q +PPK++YIHVRARRGQAT+SHSLAER RREKISER
Sbjct: 268 KGDQNPSSVPSKNTGKHGKQGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISER 327
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
MK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN R++ IE KD
Sbjct: 328 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKD 387
Query: 226 FTQQTF-DTAGMPFVSQATREY 246
Q ++ M F + T Y
Sbjct: 388 ILQSRVGPSSTMGFSPETTMPY 409
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/117 (65%), Positives = 91/117 (77%), Gaps = 4/117 (3%)
Query: 114 KAEAEPSSVKPAEQNSQPPEP--PKQDYIHVRARRGQATDSHSLAERARREKISERMKIL 171
K +++P K +E N + P +DYIHVRARRGQATDSHSLAER RREKISERMK+L
Sbjct: 228 KEDSDPKRCKKSEDNGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLL 287
Query: 172 QDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
QDLVPGCNKV GKAL+LDEIINY+QSLQRQ FLSMKL +VNTR++ ++ KD
Sbjct: 288 QDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDI 344
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 119/201 (59%), Gaps = 21/201 (10%)
Query: 33 GAHFGQHLSQFGTNREVSGDDPVNLEHK---MAHGNGVRKR-RDVEDESAKHVSTSSGNG 88
G F + QFG++RE G P E + + V R + S K S SGNG
Sbjct: 67 GIRFPPYPGQFGSDREF-GSQPTTQESNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNG 125
Query: 89 N----GNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ---------NSQPPEPP 135
+ + S+ K +G SK + SS E+ +++PPE P
Sbjct: 126 KESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAP 185
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAERARREKISERM +LQDLVPGCN++ GKA++LDEIINY+
Sbjct: 186 K-DYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYV 244
Query: 196 QSLQRQ--FLSMKLEAVNTRM 214
QSLQRQ FLSMKL VN RM
Sbjct: 245 QSLQRQVEFLSMKLATVNPRM 265
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 115/171 (67%), Gaps = 24/171 (14%)
Query: 95 DSDGKRIKT----SGSRDDNHHSKAEAEPSSVKPA--------EQNSQPPEPPKQDYIHV 142
+S GKR ++ SG+ D+N +K +A SS + E ++PP +DYIHV
Sbjct: 221 ESSGKRCRSADESSGAEDNNPTTKGKAAQSSSENGGGRKQQGKESATKPPAEAPKDYIHV 280
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ- 201
RARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQ
Sbjct: 281 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 340
Query: 202 -FLSMKLEAVNTRM--NPGIEVFPPKDFTQQT------FDTAG--MPFVSQ 241
FLSMKL VN ++ N + PKD Q +T+G +P++SQ
Sbjct: 341 EFLSMKLATVNPQLDFNSLPNLLLPKDIHQPCGPPHFPLETSGAPLPYLSQ 391
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 118/179 (65%), Gaps = 23/179 (12%)
Query: 95 DSDGKRIKTS----GSRDDNHHSKAEAEPSSVKPAEQ----NSQPPEPPKQDYIHVRARR 146
+S GKR K++ G+ D++ KA S +Q S+PPEPPK DYIHVRARR
Sbjct: 226 ESGGKRCKSADESNGAEDNSTKGKAAQSNSENGGKKQGKDSTSKPPEPPK-DYIHVRARR 284
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLS 204
G+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQ FLS
Sbjct: 285 GEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 344
Query: 205 MKLEAVNTRMN-PGIEVFPPKDFTQQT---------FDTAG--MPFVSQATREYSRGTS 251
MKL VN +++ + PKD Q +T+G +P+++Q + G S
Sbjct: 345 MKLATVNPQLDFNNLPNLLPKDIHQSCGPLQNSHFPLETSGAPLPYLNQPHQGNPLGCS 403
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 99/137 (72%), Gaps = 21/137 (15%)
Query: 95 DSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQ--------------PPEPPKQDYI 140
DS GKR K++ + ++ AE K A+ NS+ PPEPPK DYI
Sbjct: 18 DSSGKRCKST----EESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPK-DYI 72
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
HVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQR
Sbjct: 73 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 132
Query: 201 Q--FLSMKLEAVNTRMN 215
Q FLSMKL VN +++
Sbjct: 133 QVEFLSMKLATVNPQLD 149
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 123/211 (58%), Gaps = 34/211 (16%)
Query: 28 GLGQKGAHFGQHLSQFGTNR-EVSGDDPV----NLEHKMAHGNGVRKRRDVEDESAKH-- 80
GL GA + G R E S DP + K A RKR+ K
Sbjct: 153 GLPDAGAAGASKEMELGNTRDESSVSDPAPGGAEIPPKGASDGNARKRKASGKGKGKDSP 212
Query: 81 VSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQ---------- 130
+STS+ DS GKR K++ + ++ AE K A+ NS+
Sbjct: 213 MSTSAAK------EDSSGKRCKST----EESNAAAEENSGKGKAAQSNSENGGGKKQGKD 262
Query: 131 ----PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
PPEPPK DYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA+
Sbjct: 263 SSSKPPEPPK-DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAV 321
Query: 187 VLDEIINYIQSLQRQ--FLSMKLEAVNTRMN 215
+LDEIINY+QSLQRQ FLSMKL VN +++
Sbjct: 322 MLDEIINYVQSLQRQVEFLSMKLATVNPQLD 352
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/117 (69%), Positives = 91/117 (77%), Gaps = 9/117 (7%)
Query: 98 GKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAE 157
GKR G +++ +S E K + NS+PPE PK DYIHVRARRGQATDSHSLAE
Sbjct: 217 GKRENGRGFEENDENSAEE------KQTKANSKPPEAPK-DYIHVRARRGQATDSHSLAE 269
Query: 158 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
R RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQ Q FLSMKL +VNT
Sbjct: 270 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNT 326
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 88/109 (80%), Gaps = 2/109 (1%)
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
+S K +Q SQ +PPK++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+
Sbjct: 349 TSGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCS 408
Query: 180 KVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
KV GKA++LDEIINY+QSLQRQ FLSMKL VN R++ IE KD
Sbjct: 409 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDI 457
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 106/164 (64%), Gaps = 23/164 (14%)
Query: 94 NDSDGKRIKTSG------SRDDN--------HHSKAEAEPSSVKPAEQNSQPPEPPKQDY 139
N+S KRIKTS + D N + +S +++NS+ E K DY
Sbjct: 187 NNSKEKRIKTSSEGELSKTTDQNGTKNNSTITTTTNNNRETSADTSKENSKASEVQKPDY 246
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
IHVRARRGQATDSHSLAERARREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQ
Sbjct: 247 IHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 306
Query: 200 RQ--FLSMKLEAVNTRMNPGI------EVFPPKDFTQQTFDTAG 235
RQ FLSMKL AVN R++ + EVFPP T F + G
Sbjct: 307 RQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPS-CTAANFPSVG 349
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 117/170 (68%), Gaps = 24/170 (14%)
Query: 95 DSDGKRIKTS----GSRDDNHHSKAEAEPSSVKPAEQN-----SQPPEPPKQDYIHVRAR 145
+S GKR K++ G+ +++ KA A+ +S ++ S+PPEPPK DYIH RAR
Sbjct: 197 ESSGKRCKSAEESNGAEENSGKGKAAAQSNSDNGGKKQGKDGASKPPEPPK-DYIHFRAR 255
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FL 203
RG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQ FL
Sbjct: 256 RGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 315
Query: 204 SMKLEAVNTRMN-PGIEVFPPKDFTQQT---------FDTAG--MPFVSQ 241
SMKL VN +++ + PKD Q +T+G +P+++Q
Sbjct: 316 SMKLATVNPQLDFNNLPNLLPKDMHQSCGPLQNSHFPLETSGAPLPYLNQ 365
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 125/223 (56%), Gaps = 32/223 (14%)
Query: 51 GDDPVNLEHKMAHGNGVRKRRDVEDESA---------KHVSTSSGNGNGNRVNDSDGKRI 101
G D V+ + MA K+R ++ K V S G + K
Sbjct: 115 GGDLVSPKENMASAKENTKKRKPQNSKVVAASDNKQDKRVKASGEEGESKVTEQTSNKNG 174
Query: 102 KTSGSRDDNHHS-KAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERAR 160
K++ ++++N + AE + K +E +Q PE YIHVRARRGQATDSHSLAER R
Sbjct: 175 KSNANKNNNRETTSAETSKDNSKGSEVQNQKPE-----YIHVRARRGQATDSHSLAERVR 229
Query: 161 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGI 218
REKISERMK LQDLVPGCNKV GKA +LDEIINY+QSLQRQ FLSMKL AVN R++ +
Sbjct: 230 REKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNL 289
Query: 219 ------EVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWL 255
EVFP Q+F GMP + S +P +L
Sbjct: 290 DELFTKEVFPS---CAQSFPNIGMPL------DMSMSNNPSYL 323
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 117/175 (66%), Gaps = 19/175 (10%)
Query: 66 GVRKRRDVEDESAKHVSTSSGNGN--GNRVNDSDGKRIKTSGSRDDNHHSKAEAE----- 118
G R++R ++ H ST S N N G+ VNDS GK ++G ++ K E
Sbjct: 184 GNRRKRGLD-----HNSTFSPNKNAEGDAVNDSPGK--ASNGPKEHEKRPKGEQNNGADV 236
Query: 119 --PSSVKPA-EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 175
SVK A + NSQ E PK+++IHVRARRGQAT+SHSLAER RREKISERM++LQ+LV
Sbjct: 237 RGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELV 296
Query: 176 PGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
PGCNK+ GKA++LDEIINY+QSLQ+Q FLSMKL VN +N ++ KD Q
Sbjct: 297 PGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKDILQ 351
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
NS+PPE PK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+
Sbjct: 203 NSKPPEAPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 261
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNT 212
LDEIINY+QSLQ Q FLSMKL +VNT
Sbjct: 262 LDEIINYVQSLQHQVEFLSMKLASVNT 288
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 99/137 (72%), Gaps = 21/137 (15%)
Query: 95 DSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQ--------------PPEPPKQDYI 140
DS GKR K++ + ++ AE K A+ NS+ PPEPPK DYI
Sbjct: 223 DSSGKRCKST----EESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPK-DYI 277
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
HVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQR
Sbjct: 278 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 337
Query: 201 Q--FLSMKLEAVNTRMN 215
Q FLSMKL VN +++
Sbjct: 338 QVEFLSMKLATVNPQLD 354
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 94/123 (76%), Gaps = 8/123 (6%)
Query: 114 KAEAEPSSV------KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISER 167
K + PSSV K +Q +Q +PPK++YIHVRARRGQAT+SHSLAER RREKISER
Sbjct: 373 KGDQNPSSVPSKNTGKHGKQGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISER 432
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
MK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN R++ IE KD
Sbjct: 433 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKD 492
Query: 226 FTQ 228
++
Sbjct: 493 VSE 495
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 106/164 (64%), Gaps = 23/164 (14%)
Query: 94 NDSDGKRIKTSG------SRDDN--------HHSKAEAEPSSVKPAEQNSQPPEPPKQDY 139
N+S KRIKTS + D N + +S +++NS+ E K DY
Sbjct: 187 NNSKEKRIKTSSEGELSKTTDQNGTKNNSTITTTTNNNRETSADTSKENSKASEVQKPDY 246
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
IHVRARRGQATDSHSLAERARREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQ
Sbjct: 247 IHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 306
Query: 200 RQ--FLSMKLEAVNTRMNPGI------EVFPPKDFTQQTFDTAG 235
RQ FLSMKL AVN R++ + EVFPP T F + G
Sbjct: 307 RQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPS-CTAANFPSVG 349
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 91/125 (72%), Gaps = 2/125 (1%)
Query: 106 SRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 165
SR + +S K A+Q SQ +PP + Y+HVRARRGQAT+SHSLAER RREKIS
Sbjct: 269 SRKKGKQQTSSTAKASGKNAKQGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKIS 328
Query: 166 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPP 223
ERMK LQDLVPGCNKV GKA++LDEIINY+QSLQ+Q FLSMKL VN ++ +E P
Sbjct: 329 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPHVDFNMERLLP 388
Query: 224 KDFTQ 228
KD Q
Sbjct: 389 KDILQ 393
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 116/176 (65%), Gaps = 20/176 (11%)
Query: 66 GVRKRRDVEDESAKHVSTSSGNGN--GNRVNDSDGKRIKTSGSRDDNHHSKAEAE----- 118
G R++R ++ H ST S N N G+ V DS GK + GS++ K E
Sbjct: 189 GNRRKRGLD-----HNSTFSPNKNAEGDAVKDSPGK--ASDGSKEHEKRPKVEQNNGADV 241
Query: 119 --PSSVKPAE--QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 174
SVK A+ NSQ E PK+++IHVRARRGQAT+SHSLAER RREKISERM++LQ+L
Sbjct: 242 RGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQEL 301
Query: 175 VPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
VPGCNK+ GKA++LDEIINY+QSLQ+Q FLSMKL VN +N ++ KD Q
Sbjct: 302 VPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKDILQ 357
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/237 (44%), Positives = 128/237 (54%), Gaps = 40/237 (16%)
Query: 16 VPGSGSMSE---SGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGNGVRKRRD 72
VPGSG++SE S GG GQKG RE S N +++R+
Sbjct: 208 VPGSGNVSEDTQSSGGNGQKG-------------RETSS-------------NTKKRKRN 241
Query: 73 VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPP 132
+ S S S N+ D KR ++ S S +Q Q
Sbjct: 242 GQKNSEAAQSHRSQQSEEEPDNNGDEKR--------NDEQSPNSPGKKSNSGKQQGKQSS 293
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
+PPK YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEII
Sbjct: 294 DPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 353
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ-QTFDTAGMPFVSQATREY 246
NY+QSLQRQ FLSMKL VN +M+ +E KD Q + ++ PF + Y
Sbjct: 354 NYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPPNMSMSY 410
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/237 (44%), Positives = 128/237 (54%), Gaps = 40/237 (16%)
Query: 16 VPGSGSMSE---SGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGNGVRKRRD 72
VPGSG++SE S GG GQKG RE S N +++R+
Sbjct: 208 VPGSGNVSEDTQSSGGNGQKG-------------RETSS-------------NTKKRKRN 241
Query: 73 VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPP 132
+ S S S N+ D KR ++ S S +Q Q
Sbjct: 242 GQKNSEAAQSHRSQQSEEEPDNNGDEKR--------NDEQSPNSPGKKSNSGKQQGKQSS 293
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
+PPK YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEII
Sbjct: 294 DPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 353
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ-QTFDTAGMPFVSQATREY 246
NY+QSLQRQ FLSMKL VN +M+ +E KD Q + ++ PF + Y
Sbjct: 354 NYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPPNMSMAY 410
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 115/188 (61%), Gaps = 26/188 (13%)
Query: 42 QFGTNREVSG-DDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKR 100
+F +RE S DP + K A+ +KR+ K +S G D D KR
Sbjct: 85 EFAGSREASSVSDPASAMMKDAN---AKKRKAPPAAKGKGKESSVQAG---EQKDPDTKR 138
Query: 101 IKTSGSRDDNHHSKAEAEP------SSVKPAEQNSQPP---------EPPKQDYIHVRAR 145
KT G + S + +P SSV+ Q +PP EPPK DY+HVRAR
Sbjct: 139 CKTEGG-EGKEGSPVKPKPEQAGSDSSVEDGGQTQKPPGKGKNAKLVEPPK-DYVHVRAR 196
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FL 203
RGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQ FL
Sbjct: 197 RGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 256
Query: 204 SMKLEAVN 211
SMKL VN
Sbjct: 257 SMKLATVN 264
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 94/125 (75%), Gaps = 7/125 (5%)
Query: 107 RDDNHHSKAEAEPSSVKPAEQNSQPPEP-PKQDYIHVRARRGQATDSHSLAERARREKIS 165
R + +S A P S+K S+PP+ KQDYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 36 RSASENSGDSASPRSLKA---TSKPPQDLSKQDYIHVRARRGQATDSHSLAERVRREKIS 92
Query: 166 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPP 223
ERMK LQDLVPGC+K+ GKA++LDEIINY+QSLQRQ FLSMKL AVN R++ ++
Sbjct: 93 ERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDYSYDLL-G 151
Query: 224 KDFTQ 228
KD Q
Sbjct: 152 KDMLQ 156
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 95/130 (73%), Gaps = 3/130 (2%)
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
+S K +Q SQ + PK++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+
Sbjct: 347 ASGKQGKQGSQGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCS 406
Query: 180 KVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ-QTFDTAGM 236
KV GKA++LDEIINY+QSLQRQ FLSMKL VN R++ IE KD Q + + +
Sbjct: 407 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQSRAVPPSSL 466
Query: 237 PFVSQATREY 246
F S+ Y
Sbjct: 467 AFSSEMPMAY 476
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
Query: 40 LSQFGTNREVSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGK 99
L Q + +++ D +NL + N K DV K T NG +
Sbjct: 19 LEQTNAHPDLTSKDIINLRKRKCLSNPKVKVADVHSIPPKTKETDETERNGKHYKVGEST 78
Query: 100 RIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPP-KQDYIHVRARRGQATDSHSLAER 158
+ K + AE S K N++P KQDYIHVRARRGQATDSHSLAER
Sbjct: 79 KDKDDLKDKLEESNSAETAESCPKQTVDNAKPSSVSVKQDYIHVRARRGQATDSHSLAER 138
Query: 159 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNP 216
RREKISERMK+LQDLVPGCNKV GKA++LDEIINY+Q+LQ Q FLSMKL AVN +++
Sbjct: 139 VRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVEFLSMKLAAVNPQLDC 198
Query: 217 GIE 219
+E
Sbjct: 199 NVE 201
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 105/169 (62%), Gaps = 17/169 (10%)
Query: 98 GKRIKTSGS-----RDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDS 152
G+++ T GS DDN K + S +Q PK+DYIHVRARRGQAT+S
Sbjct: 209 GEQLATVGSAKKNENDDNGEPKRSSVASRKSSGKQTKDNAGSPKEDYIHVRARRGQATNS 268
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL +V
Sbjct: 269 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASV 328
Query: 211 NTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
N ++ IE KD Q TA F G PD +H ++
Sbjct: 329 NPTLDFNIERILSKDIFQSRGTTASSAF----------GFFPDIVHPRL 367
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 112/195 (57%), Gaps = 26/195 (13%)
Query: 78 AKHVSTSSGNGNGNRVNDSDGKRIKTSGSR----------------DDNHHSKAEAEPSS 121
++ +S GNG R S+ K+ K +G D+N K E S
Sbjct: 215 SEDTQSSGGNGQKGRETSSNTKKRKRNGQNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSP 274
Query: 122 VKPA-------EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 174
P +Q Q +PPK YIHVRARRGQAT+SHSLAER RREKISERMK LQDL
Sbjct: 275 NSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 334
Query: 175 VPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ-QTF 231
VPGCNKV GKA++LDEIINY+QSLQRQ FLSMKL VN +M+ +E KD Q +
Sbjct: 335 VPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAG 394
Query: 232 DTAGMPFVSQATREY 246
++ PF + Y
Sbjct: 395 SSSTTPFPPNMSMAY 409
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 120/194 (61%), Gaps = 24/194 (12%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ 127
++RR E A V +S N DS + + + +++ + S K A++
Sbjct: 178 KRRRPSEVMGADQVQSS------NVAADSANESVHSKDKGEESSPATTTTGKSKGKGAKE 231
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
+S+ K+DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++
Sbjct: 232 SSE-----KEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVM 286
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATRE 245
LDEIINY+QSLQRQ FLSMKL VN R++ IE KD + P VS +
Sbjct: 287 LDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLR-------FPGVSSS--- 336
Query: 246 YSRGTSPDWLHMQI 259
S G SP+ +H Q+
Sbjct: 337 -SIGFSPEMMHPQL 349
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 119/209 (56%), Gaps = 26/209 (12%)
Query: 65 NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSR-------DDNHHSKAEA 117
+ VRKR++ SA + G DGKR + GS ++ S A
Sbjct: 74 DNVRKRKEPPTGSAG--GKEACPGKAAEAKGPDGKRCRVGGSDSPVKPKVEEVAASDASV 131
Query: 118 EPSSVKPAEQNSQPP--EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 175
E + K + + P EPPK DY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLV
Sbjct: 132 ELKAQKKGKGKTAKPAVEPPK-DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLV 190
Query: 176 PGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN-PGIEVFPPKDFTQQT-- 230
PGCNKV+GKAL+LDEIINY+QSLQ+Q FLSMKL VN +++ + KD Q
Sbjct: 191 PGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMYQPCGP 250
Query: 231 ---------FDTAGMPFVSQATREYSRGT 250
D A PF QA +S G+
Sbjct: 251 SANSVFPLESDGAAFPFCDQADLFHSFGS 279
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 93/126 (73%), Gaps = 13/126 (10%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K+DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+
Sbjct: 235 KEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYV 294
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPD 253
QSLQRQ FLSMKL VN R++ IE KD + P VS + S G SP+
Sbjct: 295 QSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLR-------FPGVSSS----SMGFSPE 343
Query: 254 WLHMQI 259
+H Q+
Sbjct: 344 MMHPQL 349
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 114/191 (59%), Gaps = 21/191 (10%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ 127
+++R +D K+V S ++ K+ K G +D+ + S+ K E
Sbjct: 199 KRKRPSQDRGVKNVQEGS-----QQLATLAAKQEKDDGDKDEPKRPIVTSRKSNGKQTED 253
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
S + PK+DYIH+RAR GQAT+SHSLAER RREKISERMK LQDLVPGC+KVIGKA++
Sbjct: 254 KS---DAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVM 310
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATRE 245
LDEIINY+QSLQRQ FLSMKL AVN ++ IE KD F SQ T
Sbjct: 311 LDEIINYVQSLQRQVEFLSMKLSAVNPALDFNIERILSKDL-----------FQSQGTAS 359
Query: 246 YSRGTSPDWLH 256
+ G PD H
Sbjct: 360 STFGFLPDIGH 370
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 107/163 (65%), Gaps = 10/163 (6%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ 127
+++R +D KHV S ++ K+ K + +D + + S+ K E
Sbjct: 197 KRKRSGQDRGVKHVQEGS-----QQLATVVAKQEKDNDEKDGPKRPISASRKSNGKQTED 251
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
NS + PK+DYIH+RAR GQAT+SHSLAER RREKISERMK LQDLVPGC+KVIGKA++
Sbjct: 252 NS---DAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVM 308
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
LDEIINY+QSLQRQ FLSMKL VN ++ IE KDF Q
Sbjct: 309 LDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERILSKDFFQ 351
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 107/163 (65%), Gaps = 10/163 (6%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ 127
+++R +D KHV S ++ K+ K + +D + + S+ K E
Sbjct: 197 KRKRSGQDRGVKHVQEGS-----QQLATVVAKQEKDNDEKDGPKRPISASRKSNGKQTED 251
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
NS + PK+DYIH+RAR GQAT+SHSLAER RREKISERMK LQDLVPGC+KVIGKA++
Sbjct: 252 NS---DAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVM 308
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
LDEIINY+QSLQRQ FLSMKL VN ++ IE KDF Q
Sbjct: 309 LDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERILSKDFFQ 351
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 98/140 (70%), Gaps = 8/140 (5%)
Query: 91 NRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPE---PPKQDYIHVRARRG 147
+R ++ K+ K S D H E +P++ + NS E P +DYIHVRARRG
Sbjct: 188 SRAPETRAKKCKLS---TDVGHDDEEQKPAAGEAWHDNSNGKEVAAEPSKDYIHVRARRG 244
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
QATDSHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSM
Sbjct: 245 QATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 304
Query: 206 KLEAVNTRMNPGIEVFPPKD 225
KL VN R+ ++ PKD
Sbjct: 305 KLSTVNPRLKLDVDSCIPKD 324
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 93/128 (72%), Gaps = 14/128 (10%)
Query: 97 DGKRIKTSGSRDDNHHSKAEAEP----SSV-------KPAEQNSQPPEPPKQDYIHVRAR 145
D KR +T + K +AE SSV K +N++P EPPK DY+HVRAR
Sbjct: 135 DAKRCRTGDAEKKTAPVKPKAEQARSGSSVEDYGEPKKGKGKNAKPVEPPK-DYVHVRAR 193
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FL 203
RGQATDSHSLAER RRE+IS+RMK LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQ FL
Sbjct: 194 RGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 253
Query: 204 SMKLEAVN 211
SMKL VN
Sbjct: 254 SMKLATVN 261
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 93/129 (72%), Gaps = 13/129 (10%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K+DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEII
Sbjct: 247 ESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEII 306
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGT 250
NY+QSLQRQ FLSMKL VN R++ IE KD + G+P S G
Sbjct: 307 NYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLR----FPGVP-------SSSLGF 355
Query: 251 SPDWLHMQI 259
SP+ +H Q+
Sbjct: 356 SPEMMHPQL 364
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 109/167 (65%), Gaps = 24/167 (14%)
Query: 104 SGSRDDNHHSKAEAEPSSVKPAEQNS---------QPPEPPKQDYIHVRARRGQATDSHS 154
S S +++ HSK + E SS PA N + E K++YIHVRARRGQAT+SHS
Sbjct: 584 SDSANESVHSKDKGEESS--PATTNGGKSKGKGAKETSESQKEEYIHVRARRGQATNSHS 641
Query: 155 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
LAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN
Sbjct: 642 LAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 701
Query: 213 RMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
R++ IE KD + G+P S G SP+ +H Q+
Sbjct: 702 RLDLNIEGLLSKDLLR----FPGVP-------SSSIGFSPEMMHPQL 737
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 118/209 (56%), Gaps = 26/209 (12%)
Query: 65 NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSR-------DDNHHSKAEA 117
+ VRKR+ SA + G DGKR + GS ++ S A
Sbjct: 74 DNVRKRKAPPTGSAG--GKEACPGKAAEAKGPDGKRCRVGGSDSPVKPKVEEVAASDASV 131
Query: 118 EPSSVKPAEQNSQPP--EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 175
E + K + + P EPPK DY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLV
Sbjct: 132 ELKAQKKGKGKTAKPAVEPPK-DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLV 190
Query: 176 PGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN-PGIEVFPPKDFTQQT-- 230
PGCNKV+GKAL+LDEIINY+QSLQ+Q FLSMKL VN +++ + KD Q
Sbjct: 191 PGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMYQPCGP 250
Query: 231 ---------FDTAGMPFVSQATREYSRGT 250
D A PF QA +S G+
Sbjct: 251 SANSVFPLESDGAAFPFCDQADLFHSFGS 279
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 122/218 (55%), Gaps = 39/218 (17%)
Query: 16 VPGSGSMSE---SGGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGNGVRKRRD 72
VPGSG++SE S GG G+KG + S R+ +G VN E +H + +
Sbjct: 208 VPGSGNVSEDTQSSGGNGRKG----RETSSNTKKRKRNGQ--VNSEAAQSHRSQQSEEEP 261
Query: 73 VEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPP 132
+ K S S N GN+ N GKR Q Q
Sbjct: 262 DNNGDKKRNSEQSPNSPGNKTNS--GKR--------------------------QGKQSS 293
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
+ PK YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEII
Sbjct: 294 DLPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 353
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
NY+QSLQRQ FLSMKL VN +M+ +E KD Q
Sbjct: 354 NYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQ 391
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 93/129 (72%), Gaps = 14/129 (10%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
+S+P P +DY+HVRARRGQATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKAL+
Sbjct: 160 SSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALM 219
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPG-IEVFPPKDFTQQT---------FDTAG 235
LDEIINY+QSLQ+Q FLSMKL VN +++ G + KD Q ++AG
Sbjct: 220 LDEIINYVQSLQQQVEFLSMKLATVNPQLDFGNLSTLLQKDMFQSCGPSVNSVFPLESAG 279
Query: 236 --MPFVSQA 242
PF QA
Sbjct: 280 TAFPFCDQA 288
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 93/129 (72%), Gaps = 14/129 (10%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
+S+P P +DY+HVRARRGQATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKAL+
Sbjct: 160 SSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALM 219
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPG-IEVFPPKDFTQQT---------FDTAG 235
LDEIINY+QSLQ+Q FLSMKL VN +++ G + KD Q ++AG
Sbjct: 220 LDEIINYVQSLQQQVEFLSMKLATVNPQLDFGNLSTLLQKDMFQSCGPSVNSVFPLESAG 279
Query: 236 --MPFVSQA 242
PF QA
Sbjct: 280 TAFPFCDQA 288
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 118/209 (56%), Gaps = 26/209 (12%)
Query: 65 NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSR-------DDNHHSKAEA 117
+ VRKR+ SA + G DGKR + GS ++ S A
Sbjct: 74 DNVRKRKAPPTGSAG--GKEACPGKAAEAKGPDGKRCRVGGSDSPVKPKVEEVAASDASV 131
Query: 118 EPSSVKPAEQNSQPP--EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 175
E + K + + P EPPK DY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLV
Sbjct: 132 ELKAQKKGKGKTAKPAVEPPK-DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLV 190
Query: 176 PGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN-PGIEVFPPKDFTQQT-- 230
PGCNKV+GKAL+LDEIINY+QSLQ+Q FLSMKL VN +++ + KD Q
Sbjct: 191 PGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMYQPCGP 250
Query: 231 ---------FDTAGMPFVSQATREYSRGT 250
D A PF QA +S G+
Sbjct: 251 SANSVFPLESDGAAFPFCDQADLFHSFGS 279
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 109/168 (64%), Gaps = 28/168 (16%)
Query: 106 SRDDNHHSKAEAEPSSV------------KPAEQNSQPPEPPKQDYIHVRARRGQATDSH 153
S +++ HSK + E SS+ K A + S E K+DYIHVRARRGQAT+SH
Sbjct: 208 SANESVHSKDKGEESSLATTTTGPGKSKGKGARETS---ESQKEDYIHVRARRGQATNSH 264
Query: 154 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
SLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN
Sbjct: 265 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 324
Query: 212 TRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
R++ IE KD + G+P S G SP+ +H Q+
Sbjct: 325 PRLDLNIEGLLSKDLLR----FPGVP-------SSSLGFSPEMMHPQL 361
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 92/134 (68%), Gaps = 14/134 (10%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
S+ E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +
Sbjct: 131 TSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 190
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF---TQQTFDTAGMPFVSQA 242
LDEIINY+QSLQRQ FLSMKL AVN R++ I+ F K+ F T GM
Sbjct: 191 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGMS----- 245
Query: 243 TREYSRGTSPDWLH 256
S T+P +LH
Sbjct: 246 ----SEMTNPSYLH 255
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 109/167 (65%), Gaps = 24/167 (14%)
Query: 104 SGSRDDNHHSKAEAEPSSVKPAEQNS---------QPPEPPKQDYIHVRARRGQATDSHS 154
S S +++ HSK + E SS PA N + E K++YIHVRARRGQAT+SHS
Sbjct: 203 SDSANESVHSKDKGEESS--PATTNGGKSKGKGAKETSESQKEEYIHVRARRGQATNSHS 260
Query: 155 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
LAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN
Sbjct: 261 LAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 320
Query: 213 RMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
R++ IE KD + G+P S G SP+ +H Q+
Sbjct: 321 RLDLNIEGLLSKDLLR----FPGVP-------SSSIGFSPEMMHPQL 356
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 117/201 (58%), Gaps = 27/201 (13%)
Query: 75 DESAKHVSTSSGNGNGNRVNDSD---GKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQP 131
D S+K S S N V SD + ++ S +++ HS + E SS + P
Sbjct: 175 DCSSKGTSDSKKRRRPNEVVGSDQVQSANLPSADSANESVHSMDKGEESSPATTTAGAGP 234
Query: 132 -----------PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
PE K+DYIH+RARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+K
Sbjct: 235 GKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 294
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
V GKA++LDEIINY+QSLQRQ FLSMKL VN R++ IE KD + G P
Sbjct: 295 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLR----FPGAP- 349
Query: 239 VSQATREYSRGTSPDWLHMQI 259
S G P+ +H Q+
Sbjct: 350 ------SSSLGFPPEMMHPQL 364
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 96/134 (71%), Gaps = 11/134 (8%)
Query: 100 RIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERA 159
R+ GS D+N A P+ V+ E+ PEP K DYIHVRARRGQATDSHSLAER
Sbjct: 214 RVTDGGSSDEN-----AAVPAKVELEEEK---PEPVK-DYIHVRARRGQATDSHSLAERV 264
Query: 160 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPG 217
RR++ISERMK+LQ LVPGCNK+ GKAL+LDEIINY+QSLQRQ FLSMKL +N +++
Sbjct: 265 RRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQLDLD 324
Query: 218 IEVFPPKDFTQQTF 231
+ P KD Q T
Sbjct: 325 GQYKPSKDMNQVTM 338
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 105/168 (62%), Gaps = 16/168 (9%)
Query: 99 KRIKTSGSRDD------NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDS 152
KRIK GS D N ++K +++NS+ + K DYIHVRARRGQATDS
Sbjct: 143 KRIKI-GSEDGESKITGNPNTKKNCVAEDTSNSKENSKVSDVQKTDYIHVRARRGQATDS 201
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQ+Q FLSMKL V
Sbjct: 202 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATV 261
Query: 211 NTRMNPGI------EVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSP 252
N R++ I EVFP D +F GM + Y + SP
Sbjct: 262 NPRLDFNIDDLFEKEVFPNCD-ANASFQAMGMSTGLNSNNPYLQFNSP 308
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 105/168 (62%), Gaps = 16/168 (9%)
Query: 99 KRIKTSGSRDD------NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDS 152
KRIK GS D N ++K +++NS+ + K DYIHVRARRGQATDS
Sbjct: 143 KRIKI-GSEDGESKITGNPNTKKNCVAEDTSNSKENSKVSDVQKTDYIHVRARRGQATDS 201
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQ+Q FLSMKL V
Sbjct: 202 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATV 261
Query: 211 NTRMNPGI------EVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSP 252
N R++ I EVFP D +F GM + Y + SP
Sbjct: 262 NPRLDFNIDDLFEKEVFPNCD-ANASFQAMGMSTGLNSNNPYLQFNSP 308
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 92/134 (68%), Gaps = 14/134 (10%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
S+ E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +
Sbjct: 242 TSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 301
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF---TQQTFDTAGMPFVSQA 242
LDEIINY+QSLQRQ FLSMKL AVN R++ I+ F K+ F T GM
Sbjct: 302 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGMS----- 356
Query: 243 TREYSRGTSPDWLH 256
S T+P +LH
Sbjct: 357 ----SEMTNPSYLH 366
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 118/209 (56%), Gaps = 26/209 (12%)
Query: 65 NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSR-------DDNHHSKAEA 117
+ VRKR+ SA + G DGKR + GS ++ S A
Sbjct: 74 DNVRKRKAPPTGSAG--GKEACPGKAAEAKGPDGKRCRVGGSDSPVKPKVEEVAASDASV 131
Query: 118 EPSSVKPAEQNSQPP--EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 175
E + K + + P EPPK DY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLV
Sbjct: 132 ELKAQKKGKGKTAKPAVEPPK-DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLV 190
Query: 176 PGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN-PGIEVFPPKDFTQQT-- 230
PGCNKV+GKAL+LDEIINY+QSLQ+Q FLSMKL VN +++ + KD Q
Sbjct: 191 PGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMHQPCGP 250
Query: 231 ---------FDTAGMPFVSQATREYSRGT 250
D A PF QA +S G+
Sbjct: 251 SANSVFPLESDGAAFPFCDQADLFHSFGS 279
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 127/219 (57%), Gaps = 42/219 (19%)
Query: 44 GTNREVSGD-DPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIK 102
+R S D D V+ + MA G K+R + +++K V+ N D D KR+K
Sbjct: 91 AISRTCSRDGDLVSPKENMASGKENAKKR--KPQNSKVVAEIDNN------KDKD-KRVK 141
Query: 103 TSG----SRDDNHHSKA------------EAEPSSVKPAEQNSQPPEPPKQDYIHVRARR 146
+G S+ HH++ E + K +E +Q P DYIHVRARR
Sbjct: 142 VTGEEGESKVTEHHTRNKNAKSNANKNNRETSADTSKGSEVQNQKP-----DYIHVRARR 196
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLS 204
GQATDSHSLAER RREKISERMK LQDL+PGCNKV GKA +LDEIINY+QSLQRQ FLS
Sbjct: 197 GQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFLS 256
Query: 205 MKLEAVNTRMNPGI------EVFPPKDFTQQTFDTAGMP 237
MKL AVN R++ I EVFP Q+F G+P
Sbjct: 257 MKLAAVNPRLDFNIDELFAKEVFPS---CAQSFPNIGIP 292
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 117/201 (58%), Gaps = 27/201 (13%)
Query: 75 DESAKHVSTSSGNGNGNRVNDSD---GKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQP 131
D S+K S S N V SD + ++ S +++ HS + E SS + P
Sbjct: 165 DCSSKGTSDSKKRRRPNEVVGSDQVQSANLPSADSANESVHSMDKGEESSPATTTAGAGP 224
Query: 132 -----------PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
PE K+DYIH+RARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+K
Sbjct: 225 GKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSK 284
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
V GKA++LDEIINY+QSLQRQ FLSMKL VN R++ IE KD + G P
Sbjct: 285 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLR----FPGAP- 339
Query: 239 VSQATREYSRGTSPDWLHMQI 259
S G P+ +H Q+
Sbjct: 340 ------SSSLGFPPEMMHPQL 354
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 98/148 (66%), Gaps = 16/148 (10%)
Query: 127 QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
+N++P EPP+ DY+HVRARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL
Sbjct: 180 KNAKPVEPPR-DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKAL 238
Query: 187 VLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTA---------- 234
+LDEIINY+QSLQRQ FLSMKL VN + KD Q +A
Sbjct: 239 MLDEIINYVQSLQRQVEFLSMKLATVNPLDLSNLPTLLQKDMFQACGASASSVFSLESCS 298
Query: 235 -GMPFVSQATREYSRGTSPDWLHMQIGG 261
G PF Q + + +P+ L GG
Sbjct: 299 PGFPFGGQG--DVFQSFAPNGLENPCGG 324
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 143/269 (53%), Gaps = 32/269 (11%)
Query: 11 IWQFPVPGSGSMSE--------SGGGLGQKGAHFGQHLSQFGTN-REVSGDDPVNLEHKM 61
+ +FP GSGS SE G + G H + N R ++ +H++
Sbjct: 93 VPKFPSYGSGSFSEMVSSFGLTDCGQISNSGCHPNYTSNSAANNERTITNSALSQEDHQL 152
Query: 62 AH-------GNGVRKRRDVEDESA----KHVSTSSGNGNGNRVN---DSDGKRIKTSGSR 107
+ +G R++R E S K+ + +GN + + D K+ +T +
Sbjct: 153 SEEPVVGVSPDGKRRKRLAEPSSPFDPNKNAEEMHKDPSGNSSDIPKEQDEKKSRTEQNT 212
Query: 108 DDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISER 167
N K A K A++NS E PK++YIHVRARRGQAT+SHSLAER RREKISER
Sbjct: 213 AANLRGKQAA-----KQAKENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKISER 267
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
M++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+Q FLSMKL VN +N IE KD
Sbjct: 268 MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERILSKD 327
Query: 226 FTQQTFDTAGMPFVSQATRE--YSRGTSP 252
A + +S YS G P
Sbjct: 328 ILHSRGGNAAIMGLSPGINAHPYSHGIFP 356
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 112/178 (62%), Gaps = 21/178 (11%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHH-SKAEAEPSSVKPAE 126
+++R ++ KHV G+++ T + N + K E + SSV P +
Sbjct: 188 KRKRSIQHGGVKHVE--------------GGEQLATMAAAQKNENDEKYEPKRSSVAPGK 233
Query: 127 QNSQPPE----PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
+ + + PK++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV
Sbjct: 234 SSRKQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVT 293
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
GKA++LDEIINY+QSLQRQ FLSMKL +VN ++ IE KD Q TA + F
Sbjct: 294 GKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDLNIESILSKDIFQSRGTTASLAF 351
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 109/167 (65%), Gaps = 24/167 (14%)
Query: 104 SGSRDDNHHSKAEAEPSSVKPAEQNS---------QPPEPPKQDYIHVRARRGQATDSHS 154
S S +++ HSK + E SS PA N + E K++YIHVRARRGQAT+SHS
Sbjct: 203 SDSANESVHSKDKGEESS--PATTNGGKSKGKGAKETYESQKEEYIHVRARRGQATNSHS 260
Query: 155 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
LAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN
Sbjct: 261 LAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 320
Query: 213 RMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
R++ IE KD + G+P S G SP+ +H Q+
Sbjct: 321 RLDLNIEGLLSKDLLR----FPGVP-------SSSIGFSPEMMHPQL 356
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/150 (58%), Positives = 100/150 (66%), Gaps = 16/150 (10%)
Query: 93 VNDSDGKRIKTSGSRDDNHHSKAEAEPS-------SVKPAEQNSQPPEPPKQDYIHVRAR 145
V DS KR K G DD +KAE S S + ++N+ + KQDYIHVRAR
Sbjct: 387 VADSQPKRCK--GDNDDLVKAKAERSSSENSGDSGSPRAHKENNSSKDHAKQDYIHVRAR 444
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF--L 203
RGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ L
Sbjct: 445 RGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENL 504
Query: 204 SMKLEAVN-----TRMNPGIEVFPPKDFTQ 228
SMKL +VN TR++ E KD Q
Sbjct: 505 SMKLASVNPGPSSTRIDHNFETTMNKDMLQ 534
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 108/169 (63%), Gaps = 17/169 (10%)
Query: 98 GKRIKTSGSRDDNHH-SKAEAEPSSVKPAEQNSQPPE----PPKQDYIHVRARRGQATDS 152
G+++ T GS N K E E SSV + + + + PK+DYIHVRARRGQAT+S
Sbjct: 211 GEQLATVGSAQKNEDDEKGEPERSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNS 270
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL +V
Sbjct: 271 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASV 330
Query: 211 NTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
N ++ IE KD Q TA F G PD +H ++
Sbjct: 331 NPTLDFNIERILSKDIFQCRGTTASSAF----------GFFPDIVHPRL 369
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 78/87 (89%), Gaps = 3/87 (3%)
Query: 128 NSQPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
S+PP+ PKQDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA+
Sbjct: 61 TSKPPQDLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 120
Query: 187 VLDEIINYIQSLQRQ--FLSMKLEAVN 211
+LDEIINY+QSLQRQ FLSMKL AVN
Sbjct: 121 MLDEIINYVQSLQRQIEFLSMKLAAVN 147
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 80/95 (84%), Gaps = 2/95 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E P +DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVP CNKV GKA++LDEII
Sbjct: 23 EDPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEII 82
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
NY+QSLQRQ FLSMKL VN +M ++ F PKD
Sbjct: 83 NYVQSLQRQVEFLSMKLSTVNPQMEFDVDNFLPKD 117
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 91/132 (68%), Gaps = 8/132 (6%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
NS+ E P DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA +
Sbjct: 173 NSKASEKP--DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGM 230
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATRE 245
LDEIINY+QSLQRQ FLSMKL AVN R++ I+ F + F T F +
Sbjct: 231 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDLSIDDL----FDKDVFSTCATNFPNIGISS 286
Query: 246 YSRGTSPDWLHM 257
S ++P +L
Sbjct: 287 TSDISNPAYLQF 298
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 80/87 (91%), Gaps = 3/87 (3%)
Query: 127 QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
+N++P EPP+ DY+HVRARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL
Sbjct: 180 KNAKPVEPPR-DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKAL 238
Query: 187 VLDEIINYIQSLQRQ--FLSMKLEAVN 211
+LDEIINY+QSLQRQ FLSMKL VN
Sbjct: 239 MLDEIINYVQSLQRQVEFLSMKLATVN 265
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 80/87 (91%), Gaps = 3/87 (3%)
Query: 127 QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
+N++P EPP+ DY+HVRARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL
Sbjct: 180 KNAKPVEPPR-DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKAL 238
Query: 187 VLDEIINYIQSLQRQ--FLSMKLEAVN 211
+LDEIINY+QSLQRQ FLSMKL VN
Sbjct: 239 MLDEIINYVQSLQRQVEFLSMKLATVN 265
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 113/193 (58%), Gaps = 21/193 (10%)
Query: 64 GNGVRKR--RDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS 121
G+ RKR +D E + AK S+ G+ G + TS + D +
Sbjct: 81 GSNKRKRNGQDAELDQAKGTPQSAEPAKGSPETQQKGDQKPTSTTSKD-----------A 129
Query: 122 VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
K +Q S + PK++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV
Sbjct: 130 GKQGKQGSLGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 189
Query: 182 IGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE------VFPPKDFTQQTFDT 233
GKA++LDEIINY+QSLQRQ FLSMKL VN R++ IE VF PK
Sbjct: 190 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKDVFDPKILQLHAVPP 249
Query: 234 AGMPFVSQATREY 246
+ + F + Y
Sbjct: 250 SSLAFSLEMPMAY 262
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 98/144 (68%), Gaps = 13/144 (9%)
Query: 74 EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPE 133
ED +AK S NG N + GK ++S +A S + PE
Sbjct: 213 EDSAAKRC-KSMEESNGAEENCAKGKAAQSSSENGGGKKQGKDAGASKL---------PE 262
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
PPK DYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIIN
Sbjct: 263 PPK-DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 321
Query: 194 YIQSLQRQ--FLSMKLEAVNTRMN 215
Y+QSLQRQ FLSMKL VN +++
Sbjct: 322 YVQSLQRQVEFLSMKLATVNPQLD 345
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
Query: 95 DSDGKRIKTSGSRDDNHHS-KAEAEPSSVKPAEQN------SQPPEPPKQDYIHVRARRG 147
DS KR K+ D +S K +A SS + + S+ PEPPK D+IHVRARRG
Sbjct: 211 DSASKRCKSMSMEDGEENSGKGKAAQSSSENGGKKQGKDGASKLPEPPK-DFIHVRARRG 269
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQ FLSM
Sbjct: 270 EATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 329
Query: 206 KLEAVNTRMN 215
KL VN +++
Sbjct: 330 KLATVNPQLD 339
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 84/107 (78%), Gaps = 8/107 (7%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
++ NS+ E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GK
Sbjct: 217 SKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 276
Query: 185 ALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGI------EVFPP 223
A +LDEIINY+QSLQRQ FLSMKL AVN R++ I E FPP
Sbjct: 277 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLIAKETFPP 323
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
Query: 95 DSDGKRIKTSGSRDDNHHS-KAEAEPSSVKPAEQN------SQPPEPPKQDYIHVRARRG 147
DS KR K+ D +S K +A SS + + S+ PEPPK D+IHVRARRG
Sbjct: 211 DSASKRCKSMSMEDGEENSGKGKAAQSSSENGGKKQGKDGASKLPEPPK-DFIHVRARRG 269
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQ FLSM
Sbjct: 270 EATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 329
Query: 206 KLEAVNTRMN 215
KL VN +++
Sbjct: 330 KLATVNPQLD 339
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 90/127 (70%), Gaps = 12/127 (9%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
PK+DYIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY
Sbjct: 253 PKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINY 312
Query: 195 IQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSP 252
+QSLQRQ FLSMKL +VN ++ IE KD Q TA F G P
Sbjct: 313 VQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAF----------GFFP 362
Query: 253 DWLHMQI 259
D +H ++
Sbjct: 363 DIVHPRL 369
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 108/169 (63%), Gaps = 17/169 (10%)
Query: 98 GKRIKTSGSRDDNHH-SKAEAEPSSVKPAEQNSQPPE----PPKQDYIHVRARRGQATDS 152
G+++ T GS N K E + SSV + + + + PK+DYIHVRARRGQAT+S
Sbjct: 319 GEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNS 378
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL +V
Sbjct: 379 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASV 438
Query: 211 NTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
N ++ IE KD Q TA F G PD +H ++
Sbjct: 439 NPTLDFNIERILSKDIFQCRGTTASSAF----------GFFPDIVHPRL 477
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 108/169 (63%), Gaps = 17/169 (10%)
Query: 98 GKRIKTSGSRDDNHH-SKAEAEPSSVKPAEQNSQPPE----PPKQDYIHVRARRGQATDS 152
G+++ T GS N K E + SSV + + + + PK+DYIHVRARRGQAT+S
Sbjct: 268 GEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNS 327
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL +V
Sbjct: 328 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASV 387
Query: 211 NTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
N ++ IE KD Q TA F G PD +H ++
Sbjct: 388 NPTLDFNIERILSKDIFQCRGTTASSAF----------GFFPDIVHPRL 426
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 91/134 (67%), Gaps = 11/134 (8%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPPK DYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGC+KV GKA++LDEII
Sbjct: 248 EPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEII 306
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGI-EVFPPKD-------FTQQTFDTAGMPFVSQA 242
NY+QSLQRQ FLSMKL VN R+ G + F P+D + A P A
Sbjct: 307 NYVQSLQRQVEFLSMKLSTVNPRLELGADDSFVPRDDANKMCAAATSSISMAQQPLPLPA 366
Query: 243 TREYSRGTSPDWLH 256
G+SP + +
Sbjct: 367 AYHALEGSSPAFCY 380
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 129/229 (56%), Gaps = 34/229 (14%)
Query: 11 IWQFPVPGSGSMSESGGGLGQKGAHFGQH----LSQFGTNREVSGDDPVNLEHKM--AHG 64
+ + P GSGS SE G ++F Q+ + N E + D + E+ + A
Sbjct: 113 VPKIPSFGSGSFSEIVSSFGH--SNFAQNNGAGVQNTVKNVEDAQDHRQDSENGVLGASP 170
Query: 65 NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSS--- 121
NG RKR++VE E K + + + K + PSS
Sbjct: 171 NGKRKRKNVEVEKQK-------------------DQTRDLAELPKEYDEKKNSGPSSRSR 211
Query: 122 --VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
VK A+ NS E K++YIHVRA+RGQAT+SHSLAER RRE+ISERM++LQ+LVPGCN
Sbjct: 212 QAVKEAKDNSSGAEASKENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCN 271
Query: 180 KVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
K+ GKA++LDEIINY+QSLQ+Q FLSMKL VN +N IE KD
Sbjct: 272 KITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNVDIERLLSKDI 320
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 85/106 (80%), Gaps = 2/106 (1%)
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
K A+ NS E PK++YIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+
Sbjct: 246 KHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 305
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
GKA++LDEIINY+QSLQ+Q FLSMKL VN +N IE KD
Sbjct: 306 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERLLSKDI 351
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 126/219 (57%), Gaps = 42/219 (19%)
Query: 44 GTNREVSGD-DPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIK 102
+R S D D V+ + MA G K+R + +++K V+ N D D KR+K
Sbjct: 91 AISRTCSRDGDLVSPKENMASGKENAKKR--KPQNSKVVAEIDNN------KDKD-KRVK 141
Query: 103 TSG----SRDDNHHSKA------------EAEPSSVKPAEQNSQPPEPPKQDYIHVRARR 146
+G S+ HH++ E + K +E +Q P DYIHVRARR
Sbjct: 142 VTGEEGESKVTEHHTRNKNAKSNANKNNRETSADTSKGSEVQNQKP-----DYIHVRARR 196
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLS 204
GQATDSHSLAER RREKISERMK LQDL+PGCNKV GKA +LDEIINY+QSLQRQ FLS
Sbjct: 197 GQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFLS 256
Query: 205 MKLEAVNTRMNPGI------EVFPPKDFTQQTFDTAGMP 237
MKL AVN ++ I EVFP Q+F G+P
Sbjct: 257 MKLAAVNPGLDFNIDELFAKEVFPS---CAQSFPNIGIP 292
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/96 (77%), Positives = 81/96 (84%), Gaps = 3/96 (3%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+
Sbjct: 137 KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYV 196
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPGI-EVFPPKDFTQ 228
QSLQRQ FLSMKL AVN R++ I E+F + FTQ
Sbjct: 197 QSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFTQ 232
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/96 (73%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
Query: 119 PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
P S + +P + PKQDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC
Sbjct: 41 PRSTLKGATSKRPQDFPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 100
Query: 179 NKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
+KV GKA++LDEIINY+QSLQRQ FLSMKL VN
Sbjct: 101 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNV 136
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 120 SSVKPAEQNSQ-PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
++ KP+ N++ + K+DYIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC
Sbjct: 53 ANAKPSGTNAKNSTDGAKEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 112
Query: 179 NKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
+KV GKA++LDEIINY+QSLQRQ FLSMKL AVN ++ IE KD Q
Sbjct: 113 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPTLDFNIEGLLSKDLLQ 164
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
E++S E PK++YIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA
Sbjct: 216 EKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 275
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
++LDEIINY+QSLQ+Q FLSMKL VN +N IE KD
Sbjct: 276 VMLDEIINYVQSLQQQVEFLSMKLATVNPDVNVDIERILSKDI 318
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
E++S E PK++YIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA
Sbjct: 63 EKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 122
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
++LDEIINY+QSLQ+Q FLSMKL VN +N IE KD
Sbjct: 123 VMLDEIINYVQSLQQQVEFLSMKLATVNPDVNVDIERILSKDI 165
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 80/98 (81%), Gaps = 3/98 (3%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
PEP K DYIHVRARRGQATDSHSLAER RRE+ISERMK+LQ LVPGCNK+ GKAL+LDEI
Sbjct: 72 PEPAK-DYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEI 130
Query: 192 INYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFT 227
INY+QSLQRQ FLSMKL +N +++ P KD +
Sbjct: 131 INYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMS 168
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 120/215 (55%), Gaps = 42/215 (19%)
Query: 75 DESAKHVSTSSGNG-----NGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNS 129
D S+K +S NG G RV+ S K+ K SG D H++ + + ++V A++N
Sbjct: 166 DSSSKELSMPGRNGGAGHDEGTRVSCS--KKRKRSGQDDGVKHAEGDEQLATVGSAQKNE 223
Query: 130 QPPE-----------------------PPKQDYIHVRARRGQATDSHSLAERARREKISE 166
+ PK++YIHVRARRGQAT+SHSLAER RREKISE
Sbjct: 224 NDEKGKPKRSSVASGKSSGKQTKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISE 283
Query: 167 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPK 224
RMK LQ+LVPGC KV GKA++LDEIINY+QSLQRQ FLSMKL +VN ++ IE K
Sbjct: 284 RMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSK 343
Query: 225 DFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
D Q A F G PD +H ++
Sbjct: 344 DIFQSRGSAASSAF----------GFLPDIVHPRL 368
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/97 (73%), Positives = 81/97 (83%), Gaps = 3/97 (3%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
PE K+DYIH+RARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEI
Sbjct: 247 PESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEI 306
Query: 192 INYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
INY+QSLQRQ FLSMKL VN R++ IE KD
Sbjct: 307 INYVQSLQRQVEFLSMKLATVNPRLD-NIEGLLSKDL 342
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 86/105 (81%), Gaps = 2/105 (1%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
+++SQ E PK++YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA
Sbjct: 190 KESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 249
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
++LDEIINY+QSLQ+Q FLSMKL VN +N I+ KD Q
Sbjct: 250 VMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQ 294
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 80/99 (80%), Gaps = 3/99 (3%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
PEP K DYIHVRARRGQATDSHSLAER RRE+ISERMK+LQ LVPGCNK+ GKAL+LDEI
Sbjct: 102 PEPAK-DYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEI 160
Query: 192 INYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
INY+QSLQRQ FLSMKL +N +++ P KD +
Sbjct: 161 INYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSH 199
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 83/107 (77%), Gaps = 2/107 (1%)
Query: 122 VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
K A+ N Q E PK DYIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+
Sbjct: 220 AKQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKI 279
Query: 182 IGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
GKA++LDEIINY+QSLQ+Q FLSMKL VN + +E KD
Sbjct: 280 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELYNDVEKIQSKDI 326
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 86/105 (81%), Gaps = 2/105 (1%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
+++SQ E PK++YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA
Sbjct: 138 KESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 197
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
++LDEIINY+QSLQ+Q FLSMKL VN +N I+ KD Q
Sbjct: 198 VMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQ 242
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 133/236 (56%), Gaps = 21/236 (8%)
Query: 8 FAEIW-QFPVPGSGSMSESGGGLGQKGA----HFG--QHLSQFGTNREVSGDDPVNLEHK 60
F E+ +FP GSG+ SE G LG H G + ++ N + D ++ E
Sbjct: 18 FVELVPKFPGFGSGNFSEMVGSLGLTECGQITHTGCPPNYNKEANNAQHQEDQQLSEETS 77
Query: 61 M-AHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEP 119
+ A NG R++R E S + N G D G+ + D+ K E P
Sbjct: 78 IGASPNGKRRKRVPESNSPL---DPNKNTEGELRKDLSGESCDIAKELDEKTQ-KTEQNP 133
Query: 120 -------SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 172
+ K A+ ++Q E PK++Y HVRARRGQAT+SHSLAER RREKISERM++LQ
Sbjct: 134 GPNLRGKQAAKQAKDDTQSGEVPKENYFHVRARRGQATNSHSLAERVRREKISERMRMLQ 193
Query: 173 DLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
+LVPGCNK+ GKA++LDEIINY+QSLQ+Q FLSMKL VN + +E KD
Sbjct: 194 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELQIDVERILSKDI 249
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/116 (65%), Positives = 86/116 (74%), Gaps = 8/116 (6%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
++QNS+ E P DYIHVRARRGQATDSHSLAER RREKISERM LQDLVPGCNKV GK
Sbjct: 179 SKQNSKASEKP--DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGK 236
Query: 185 ALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
A +LDEIINY+QSLQRQ FLSMKL AVN R++ ++ F + F T F
Sbjct: 237 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFSMDDL----FDKDVFPTCAANF 288
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 99/151 (65%), Gaps = 21/151 (13%)
Query: 95 DSDGKRIKTSGSRDDNHHSKAE----------AEPSSVKPAEQNSQPPEPPKQDYIHVRA 144
DS KR K G D++ +KAE P ++K + N++ KQDYIHVRA
Sbjct: 1 DSKPKRCK--GENDESVKAKAERSCSENSGDSGSPRALK--DSNNRNKILSKQDYIHVRA 56
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF-- 202
RRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQ
Sbjct: 57 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVES 116
Query: 203 LSMKLEAVN-----TRMNPGIEVFPPKDFTQ 228
LSMKL +VN R++ E KD Q
Sbjct: 117 LSMKLASVNPGPSTARLDYNFETALNKDMLQ 147
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 89/126 (70%), Gaps = 17/126 (13%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPPK DY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEII
Sbjct: 148 EPPK-DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEII 206
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMN-PGIEVFPPKDFTQQ-----------TFDTAG--M 236
NY+QSLQ+Q FLSMKL VN ++ + KD QQ ++AG
Sbjct: 207 NYVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDMYQQPCGGPSASSVFPLESAGAAF 266
Query: 237 PFVSQA 242
PF QA
Sbjct: 267 PFCEQA 272
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 86/105 (81%), Gaps = 2/105 (1%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
+++SQ E PK++YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA
Sbjct: 188 KESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 247
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
++LDEIINY+QSLQ+Q FLSMKL VN +N I+ KD Q
Sbjct: 248 VMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQ 292
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 86/120 (71%), Gaps = 11/120 (9%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
++ NS+ E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GK
Sbjct: 220 SKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 279
Query: 185 ALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGI------EVFPPKDFTQQTFDTAGM 236
A +LDEIINY+QSLQRQ FLSMKL AVN R++ E FP F T GM
Sbjct: 280 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNFDNLFAREAFPA---CSVNFPTIGM 336
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 80/97 (82%), Gaps = 2/97 (2%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
+ +SQ E PK+DYIHVRA+RGQAT+SHSLAER RRE+ISERMK LQDLVPGCNK+ GK
Sbjct: 229 VKMSSQTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGK 288
Query: 185 ALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
A++LDEIINY+QSLQRQ FLSMKL V MN IE
Sbjct: 289 AVMLDEIINYVQSLQRQVEFLSMKLATVYPEMNVQIE 325
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 89/126 (70%), Gaps = 17/126 (13%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPPK DY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEII
Sbjct: 148 EPPK-DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEII 206
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMN-PGIEVFPPKDFTQQ-----------TFDTAG--M 236
NY+QSLQ+Q FLSMKL VN ++ + KD QQ ++AG
Sbjct: 207 NYVQSLQQQVEFLSMKLATVNPELDFSNLSTLLHKDMYQQPCGGPSASSVFPLESAGAAF 266
Query: 237 PFVSQA 242
PF QA
Sbjct: 267 PFCEQA 272
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 111/190 (58%), Gaps = 16/190 (8%)
Query: 60 KMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDG-------------KRIKTSGS 106
K+ +G + V++ S +VS S + GN +D+ KRI
Sbjct: 127 KLDNGPLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCE 186
Query: 107 RDDNHHSKAEAEPSS-VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 165
+++ K E P+S QP + K YIH+RARRGQAT+SHSLAER RREKIS
Sbjct: 187 EEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKIS 246
Query: 166 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPP 223
ERMK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q FLSMKL AVN ++ +E
Sbjct: 247 ERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLA 306
Query: 224 KDFTQQTFDT 233
KD Q + T
Sbjct: 307 KDALQSSAPT 316
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 83/105 (79%), Gaps = 4/105 (3%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
PK DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ GKA +LDEIINY
Sbjct: 183 PKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINY 242
Query: 195 IQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
+QSLQRQ FLS+KL +N R + ++ F K+F + AG P
Sbjct: 243 VQSLQRQVEFLSLKLATMNPRTDFNLDTFLGKEFP--AYVAAGFP 285
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 83/105 (79%), Gaps = 4/105 (3%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
PK DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ GKA +LDEIINY
Sbjct: 183 PKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINY 242
Query: 195 IQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
+QSLQRQ FLS+KL +N R + ++ F K+F + AG P
Sbjct: 243 VQSLQRQVEFLSLKLATMNPRTDFNLDTFLGKEFP--AYVAAGFP 285
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 92/133 (69%), Gaps = 15/133 (11%)
Query: 97 DGKRIKTSGSRDD----------NHHSKAEAEPSSVKPAEQNSQPP--EPPKQDYIHVRA 144
DGKR + G+ D S A E + K + S P EPPK DY+HVRA
Sbjct: 100 DGKRCRVVGASDSPVKPKEEEEEAAASDALVEVKAQKKGKGKSSKPAVEPPK-DYVHVRA 158
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--F 202
RRGQATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+Q F
Sbjct: 159 RRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEF 218
Query: 203 LSMKLEAVNTRMN 215
LSMKL VN ++
Sbjct: 219 LSMKLATVNPELD 231
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 85/105 (80%), Gaps = 2/105 (1%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
+++SQ E PK++YIH+RARRGQAT+SHSLAER RREKISERM++LQ+L PGCNK+ GKA
Sbjct: 190 KESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKA 249
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
++LDEIINY+QSLQ+Q FLSMKL VN +N I+ KD Q
Sbjct: 250 VMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQ 294
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 111/190 (58%), Gaps = 16/190 (8%)
Query: 60 KMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDG-------------KRIKTSGS 106
K+ +G + V++ S +VS S + GN +D+ KRI
Sbjct: 76 KLDNGPLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCE 135
Query: 107 RDDNHHSKAEAEPSS-VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 165
+++ K E P+S QP + K YIH+RARRGQAT+SHSLAER RREKIS
Sbjct: 136 EEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKIS 195
Query: 166 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPP 223
ERMK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q FLSMKL AVN ++ +E
Sbjct: 196 ERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLA 255
Query: 224 KDFTQQTFDT 233
KD Q + T
Sbjct: 256 KDALQSSAPT 265
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 102/155 (65%), Gaps = 5/155 (3%)
Query: 107 RDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISE 166
+D+ S + SS K A+ N+ P K++YIHVRARRGQAT+SHSLAER RREKISE
Sbjct: 217 KDEPKRSSVASGKSSGKQAKDNAGSP---KEEYIHVRARRGQATNSHSLAERVRREKISE 273
Query: 167 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPK 224
RMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL +VN ++ I+ K
Sbjct: 274 RMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIDRILSK 333
Query: 225 DFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQI 259
D Q A F Y + P ++ +++
Sbjct: 334 DIFQSQGAIASSVFGFLPGIVYPQLHQPKYMQVKM 368
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 2/87 (2%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
++NS+P QDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA
Sbjct: 17 KENSKPGAGNTQDYIHVRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKA 76
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAV 210
++LDEIINY+QSLQRQ FLSMKL AV
Sbjct: 77 MMLDEIINYVQSLQRQVEFLSMKLAAV 103
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 83/103 (80%), Gaps = 2/103 (1%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
+++N Q PK DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ G+
Sbjct: 185 SKENQQTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGR 244
Query: 185 ALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
A +LDEIINY+QSLQRQ FLSMKL A+N R I+ F K+
Sbjct: 245 AGMLDEIINYVQSLQRQVEFLSMKLAALNPRPEFNIDNFSGKE 287
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 90/125 (72%), Gaps = 2/125 (1%)
Query: 108 DDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISER 167
+D+ K E P++ K + + + + YIHVRAR+GQAT+ HSLAER RREKISER
Sbjct: 140 EDDAKGKEETPPATRKKKGKGASAADGESESYIHVRARKGQATNRHSLAERLRREKISER 199
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
MK+LQDLVPGC KV GKA++LDEIINY+QSLQRQ FLSMKL AVN ++ I+ KD
Sbjct: 200 MKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPQLGLNIKQLLSKD 259
Query: 226 FTQQT 230
F ++
Sbjct: 260 FCKKC 264
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Query: 127 QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
++SQ E PK+ YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA
Sbjct: 33 ESSQNEEEPKEKYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAF 92
Query: 187 VLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQ 229
+LDEIINYIQSLQ+Q FLSMKL VN +N I+ KD Q
Sbjct: 93 MLDEIINYIQSLQQQVEFLSMKLATVNPDINIDIDRILAKDVRAQ 137
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 76/85 (89%), Gaps = 3/85 (3%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPPK DY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEII
Sbjct: 150 EPPK-DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEII 208
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMN 215
NY+QSLQ+Q FLSMKL VN ++
Sbjct: 209 NYVQSLQQQVEFLSMKLATVNPELD 233
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 89/138 (64%), Gaps = 15/138 (10%)
Query: 93 VNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDS 152
+N S KR + S +D + E E S P +DYIHVRARRGQATDS
Sbjct: 222 INTSPPKRPRVSDGGNDENAGAVEEEKSE-------------PVKDYIHVRARRGQATDS 268
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKI ERMK+LQ LVP CNK+ GKAL+LDEIINY+QSLQRQ FLSMKL +
Sbjct: 269 HSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQRQVEFLSMKLSTM 328
Query: 211 NTRMNPGIEVFPPKDFTQ 228
N ++ + P K+ Q
Sbjct: 329 NPQLELDEQCIPSKEMNQ 346
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 4/98 (4%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
+DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 332
Query: 197 SLQRQ--FLSMKLEAVNTR--MNPGIEVFPPKDFTQQT 230
SLQ Q FLSMKL V+ R ++ G V P D T Q
Sbjct: 333 SLQCQVEFLSMKLSTVDPRRELDVGCFVVPKDDVTMQA 370
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 4/98 (4%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
+DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 253 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 312
Query: 197 SLQRQ--FLSMKLEAVNTR--MNPGIEVFPPKDFTQQT 230
SLQ Q FLSMKL V+ R ++ G V P D T Q
Sbjct: 313 SLQCQVEFLSMKLSTVDPRRELDVGCFVVPKDDVTMQA 350
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 89/124 (71%), Gaps = 15/124 (12%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPP+ DY+HVRARRGQATDSHSLAER RREKI+ +MK+LQDLVPGCNKVIGKAL+LDEII
Sbjct: 169 EPPR-DYVHVRARRGQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEII 227
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGI----------EVFPPKDFTQQTFDTAG--MPF 238
NY+QSLQ+Q FLSMKL VN +++ E F P + ++AG PF
Sbjct: 228 NYVQSLQQQVEFLSMKLATVNPQLDFSTLSTLLHKDMNEAFGPSPSSVFPLESAGGAFPF 287
Query: 239 VSQA 242
QA
Sbjct: 288 YEQA 291
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 109/157 (69%), Gaps = 12/157 (7%)
Query: 80 HVSTSSGNGNGNRVNDSDGKRI---KTSGSRDDNHHSKAEAEPS------SVKPAEQNSQ 130
+ +S+G+ NR N + GK + K GS +D+ ++ E S S++ A++ +
Sbjct: 28 QLYSSTGDAQLNR-NMNTGKCLEDGKRKGSGEDSSSLRSLGETSALQREVSMECADEKAG 86
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
++DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDE
Sbjct: 87 DARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDE 146
Query: 191 IINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
IINY+QSLQRQ FLSMKL A+ +N +++ +D
Sbjct: 147 IINYVQSLQRQIEFLSMKLSAIGPGLNCDLDLQDEQD 183
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/109 (67%), Positives = 83/109 (76%), Gaps = 17/109 (15%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK------------ 180
EPPK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNK
Sbjct: 137 EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNF 195
Query: 181 --VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
V GKA++LDEIINY+QSLQRQ FLSMKL VN +++ ++ F PKD
Sbjct: 196 TLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKD 244
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 103/158 (65%), Gaps = 21/158 (13%)
Query: 83 TSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEP-------------SSVKPAEQNS 129
+S+ N G + DS GK S DD+ + E +P +K + +S
Sbjct: 165 SSNKNAEGEALKDSSGK------SCDDDVKEQCEKKPRVAQNSTANLCGKQLLKQKKDDS 218
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
+ E K+++IHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGC+K GKA++LD
Sbjct: 219 ESEEGSKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLD 278
Query: 190 EIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
EIINY+QSLQ+Q FLSMKL VN ++N +E KD
Sbjct: 279 EIINYVQSLQQQVEFLSMKLATVNPQLNFNVEQICSKD 316
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 109/157 (69%), Gaps = 12/157 (7%)
Query: 80 HVSTSSGNGNGNRVNDSDGKRI---KTSGSRDDNHHSKAEAEPS------SVKPAEQNSQ 130
+ +S+G+ NR N + GK + K GS +D+ ++ E S S++ A++ +
Sbjct: 54 QLYSSTGDAQLNR-NMNTGKCLEDGKRKGSGEDSSSLRSLGETSALQREVSMECADEKAG 112
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
++DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDE
Sbjct: 113 DARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDE 172
Query: 191 IINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
IINY+QSLQRQ FLSMKL A+ +N +++ +D
Sbjct: 173 IINYVQSLQRQIEFLSMKLSAIGPGLNCDLDLQDEQD 209
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 77/85 (90%), Gaps = 3/85 (3%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPP+ DY+HVRARRGQATDSHSLAER RREKI+ +MK+LQDLVPGCNKVIGKAL+LDEII
Sbjct: 60 EPPR-DYVHVRARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEII 118
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMN 215
NY+QSLQ+Q FLSMKL VN +++
Sbjct: 119 NYVQSLQQQVEFLSMKLSTVNPQLD 143
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 96/131 (73%), Gaps = 8/131 (6%)
Query: 97 DGKRIKTSGSRDDNHHSKAEAEP-----SSVKPAEQNSQPPEPPKQDYIHVRARRGQATD 151
DGKR K SG + HS EA S++ A++ ++DY+HVRA+RGQAT+
Sbjct: 74 DGKR-KGSGEDSSSLHSLDEASALLQREVSMECADEKPGDAGAKREDYVHVRAKRGQATN 132
Query: 152 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEA 209
SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQ FLSMKL A
Sbjct: 133 SHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSA 192
Query: 210 VNTRMNPGIEV 220
++ +N +++
Sbjct: 193 ISPELNCDLDL 203
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 116/178 (65%), Gaps = 7/178 (3%)
Query: 44 GTNREVSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKT 103
G R +G N++ H +G ++R+ ++D A ++S +R+ + ++ +
Sbjct: 54 GLYRSPNGTFCQNIQLSDDHSSGAKRRKGIDDHIALLNPSAS-----SRIQNVGDQQTEV 108
Query: 104 SGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREK 163
S ++ + + S ++++S + K+DY+HVRA+RGQAT+SHSLAER RR+K
Sbjct: 109 SSQQERISMEEDNQKSCSKMQSKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKK 168
Query: 164 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
ISERMK+LQDLVPGC+K+ GKA++LDEIINY+QSLQRQ FLSMKL VN ++ IE
Sbjct: 169 ISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELSFDIE 226
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
PKQ YIHVRARRGQATDSHSLAER RREKISERMK LQDLVP C+KV GKA++LDEIINY
Sbjct: 18 PKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINY 77
Query: 195 IQSLQRQ--FLSMKLEAVNTRMN 215
+QSLQRQ FLSMKL AV+ R++
Sbjct: 78 VQSLQRQIEFLSMKLAAVDPRLD 100
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 107/152 (70%), Gaps = 12/152 (7%)
Query: 80 HVSTSSGNGNGNRVNDSDGKRI---KTSGSRDDNHHSKAEAEPS------SVKPAEQNSQ 130
+ +S+G+ NR N + GK + K GS +D+ ++ E S S++ A++ +
Sbjct: 28 QLYSSTGDAQLNR-NMNTGKCLEDGKRKGSGEDSSSLRSLGETSALQREVSMECADEKAG 86
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
++DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDE
Sbjct: 87 DARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDE 146
Query: 191 IINYIQSLQRQ--FLSMKLEAVNTRMNPGIEV 220
IINY+QSLQRQ FLSMKL A+ +N +++
Sbjct: 147 IINYVQSLQRQIEFLSMKLSAIGPGLNCDLDL 178
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 107/152 (70%), Gaps = 12/152 (7%)
Query: 80 HVSTSSGNGNGNRVNDSDGKRI---KTSGSRDDNHHSKAEAEPS------SVKPAEQNSQ 130
+ +S+G+ NR N + GK + K GS +D+ ++ E S S++ A++ +
Sbjct: 54 QLYSSTGDAQLNR-NMNTGKCLEDGKRKGSGEDSSSLRSLGETSALQREVSMECADEKAG 112
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
++DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDE
Sbjct: 113 DARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDE 172
Query: 191 IINYIQSLQRQ--FLSMKLEAVNTRMNPGIEV 220
IINY+QSLQRQ FLSMKL A+ +N +++
Sbjct: 173 IINYVQSLQRQIEFLSMKLSAIGPGLNCDLDL 204
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 121/214 (56%), Gaps = 15/214 (7%)
Query: 14 FPVPGSGSMSES----GGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGNGVRK 69
F P +G ++S GG + + G +L V GD +++ + G G K
Sbjct: 33 FDSPLAGFFADSSMITGGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTFGTGNFK 92
Query: 70 RRDVEDESAKHVSTSSGNGNGNRVN-DSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQN 128
+R + E+ K + NR + +G+ K+ + +N +K+ + E+N
Sbjct: 93 KRKFDTET-KDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEEN 151
Query: 129 S-------QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
+ E K DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+
Sbjct: 152 NFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 211
Query: 182 IGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR 213
GKA +LDEIINY+QSLQRQ FLSMKL VN R
Sbjct: 212 TGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPR 245
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 101/162 (62%), Gaps = 9/162 (5%)
Query: 75 DESAKHVSTSSGNGNGNRVNDSDGKRI-KTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPE 133
D++ V++S G + R KRI K +D ++ S+V Q +
Sbjct: 106 DDAKCGVTSSKGFNSKKR------KRIGKDCEGEEDKMQKDEQSSNSNVNKTNSEKQASD 159
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
K YIH+RARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIIN
Sbjct: 160 SLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIIN 219
Query: 194 YIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDT 233
Y+QSLQ Q FLSMKL AVN ++ +E KD Q + T
Sbjct: 220 YVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAPT 261
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 92/131 (70%), Gaps = 4/131 (3%)
Query: 84 SSGNGNGNRVNDSDGKRIKTSGSRDDN-HHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHV 142
++ + + N D + +K+ + N + +K E + +S K + EPPK DYIHV
Sbjct: 125 TNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPK-DYIHV 183
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ- 201
RARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ Q
Sbjct: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
Query: 202 -FLSMKLEAVN 211
FLSMKL +VN
Sbjct: 244 EFLSMKLASVN 254
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 78/93 (83%), Gaps = 2/93 (2%)
Query: 121 SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
S +++N + PK DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK
Sbjct: 16 SADSSKENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNK 75
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
+ G+A +LDEIINY+QSLQRQ F+SMKL AVN
Sbjct: 76 ITGRAGMLDEIINYVQSLQRQVEFISMKLAAVN 108
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 121/214 (56%), Gaps = 15/214 (7%)
Query: 14 FPVPGSGSMSES----GGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGNGVRK 69
F P +G ++S GG + + G +L V GD +++ + G G K
Sbjct: 33 FDSPLAGFFADSSMITGGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTLGTGNFK 92
Query: 70 RRDVEDESAKHVSTSSGNGNGNRVN-DSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQN 128
+R + E+ K + NR + +G+ K+ + +N +K+ + E+N
Sbjct: 93 KRKFDTET-KDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEEN 151
Query: 129 S-------QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
+ E K DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+
Sbjct: 152 NFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 211
Query: 182 IGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR 213
GKA +LDEIINY+QSLQRQ FLSMKL VN R
Sbjct: 212 TGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPR 245
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 107/152 (70%), Gaps = 12/152 (7%)
Query: 80 HVSTSSGNGNGNRVNDSDGKRI---KTSGSRDDNHHSKAEAEPS------SVKPAEQNSQ 130
+ +S+G+ NR N + GK + K GS +D+ ++ E S S++ A++ +
Sbjct: 54 QLYSSTGDAQLNR-NMNTGKCLEDGKRKGSGEDSSSLRSLGETSALQREVSMECADEKAG 112
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
++DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDE
Sbjct: 113 DARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDE 172
Query: 191 IINYIQSLQRQ--FLSMKLEAVNTRMNPGIEV 220
IINY+QSLQRQ FLSMKL A+ +N +++
Sbjct: 173 IINYVQSLQRQIEFLSMKLSAIGPGLNCDLDL 204
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 89/130 (68%), Gaps = 9/130 (6%)
Query: 85 SGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAE-PSSVKPAEQNSQPPEPPKQDYIHVR 143
+ NG+ N D K +K+ + K E + P +VK PE P Y+HVR
Sbjct: 120 TTNGSLNSAQSKDVKEVKSKRQKKCRGDMKQEEKRPKAVKKV------PEEPPTGYVHVR 173
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ-- 201
ARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEIINY+QSLQ Q
Sbjct: 174 ARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 233
Query: 202 FLSMKLEAVN 211
FLSMKL +VN
Sbjct: 234 FLSMKLASVN 243
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 96/158 (60%), Gaps = 30/158 (18%)
Query: 94 NDSDGKRIKTSGS------------RDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIH 141
NDS KRIK +D+ +K++ + NS+ E K DYIH
Sbjct: 109 NDSKDKRIKVDSEDGESNITGKISIKDNKTATKSKNRGTCAN--SSNSKENEDQKLDYIH 166
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQ
Sbjct: 167 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 226
Query: 202 --FLSMKLEAVNTRMNPGIE----------VFPPKDFT 227
FLSMKL V NP +E VFP D T
Sbjct: 227 VEFLSMKLATV----NPALEFNSDDLFDKVVFPSCDST 260
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 119/200 (59%), Gaps = 24/200 (12%)
Query: 31 QKGAHFGQH-LSQFGTNRE--------VSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHV 81
QK A+ GQ+ +G E SG +++ H GV+KR+ +ED
Sbjct: 31 QKMAYSGQYGFGSYGIGLEDRPGLYQSSSGTLSQDIQMSDEHSGGVKKRKGMEDRVT--- 87
Query: 82 STSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIH 141
++++ ++ + S + N + + S ++++S + K+DY+H
Sbjct: 88 ----------LLHNAGDQQTEGSSQPERNSMEEGNRKISPKMQSKEDSSDGDGTKEDYVH 137
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQ
Sbjct: 138 VRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQ 197
Query: 202 --FLSMKLEAVNTRMNPGIE 219
FLSMKL VN + IE
Sbjct: 198 VEFLSMKLATVNPELGFDIE 217
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 88/133 (66%), Gaps = 5/133 (3%)
Query: 99 KRIKTSGSRDDNHHSKAE---AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSL 155
K+IK + + K+ E SS E + + E K DYIHVRARRGQATD HSL
Sbjct: 139 KKIKVEAETESSMKGKSNMRNTEASSDTSKETSKKASEIQKLDYIHVRARRGQATDRHSL 198
Query: 156 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR 213
AERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQ FLSMKL +N
Sbjct: 199 AERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPE 258
Query: 214 MNPGIEVFPPKDF 226
+ +E K F
Sbjct: 259 LELAVEDVSVKQF 271
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 121/214 (56%), Gaps = 15/214 (7%)
Query: 14 FPVPGSGSMSES----GGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGNGVRK 69
F P +G ++S GG + + G +L V GD +++ + G G K
Sbjct: 33 FDSPLAGFFADSSMITGGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTLGTGNFK 92
Query: 70 RRDVEDESAKHVSTSSGNGNGNRVN-DSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQN 128
+R + E+ K + NR + +G+ K+ + +N +K+ + E+N
Sbjct: 93 KRKFDTET-KDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEEN 151
Query: 129 S-------QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
+ E K DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+
Sbjct: 152 NFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 211
Query: 182 IGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR 213
GKA +LDEIINY+QSLQRQ FLSMKL VN R
Sbjct: 212 TGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPR 245
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 121/214 (56%), Gaps = 15/214 (7%)
Query: 14 FPVPGSGSMSES----GGGLGQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHGNGVRK 69
F P +G ++S GG + + G +L V GD +++ + G G K
Sbjct: 33 FDSPLAGFFADSSMITGGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTLGTGNFK 92
Query: 70 RRDVEDESAKHVSTSSGNGNGNRVN-DSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQN 128
+R + E+ K + NR + +G+ K+ + +N +K+ + E+N
Sbjct: 93 KRKFDTET-KDCNEKKKKVTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEEN 151
Query: 129 S-------QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
+ E K DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+
Sbjct: 152 NFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKI 211
Query: 182 IGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR 213
GKA +LDEIINY+QSLQRQ FLSMKL VN R
Sbjct: 212 TGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPR 245
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 94/136 (69%), Gaps = 8/136 (5%)
Query: 87 NGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPS-----SVKPAEQNSQPPEPPKQDYIH 141
N + N +S KR K S+ ++ S AE E + + K ++ S P + DYIH
Sbjct: 73 NASANSFENSTEKR-KAPKSKQESRSSGAEEEGTARGGATSKNKKKASGSDAPKETDYIH 131
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATDSHSLAER RRE+ISERMK LQ+LVPGC+K++GKA LDEIINY+QSLQRQ
Sbjct: 132 VRARRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQ 191
Query: 202 --FLSMKLEAVNTRMN 215
FLSMKL A RM+
Sbjct: 192 VEFLSMKLAAAEPRMH 207
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 114/185 (61%), Gaps = 22/185 (11%)
Query: 44 GTNREVSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKT 103
G R SG N++ + V+KR+ ++D ++ +N S R++
Sbjct: 54 GPYRSSSGTFSQNIQLSVEPSGVVKKRKGIDDCTS-------------LLNPSASSRMQN 100
Query: 104 SGSRDDNHHSKAE----AEPSSVKP---AEQNSQPPEPPKQDYIHVRARRGQATDSHSLA 156
G + S+ E E ++ P ++++S + K+DY+H+RA+RGQAT+SHSLA
Sbjct: 101 VGDQQTEVSSQTERNSLEENRTISPKMQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLA 160
Query: 157 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRM 214
ER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+QSLQRQ FLSMKL VN +
Sbjct: 161 ERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPEL 220
Query: 215 NPGIE 219
IE
Sbjct: 221 GFDIE 225
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 119/203 (58%), Gaps = 30/203 (14%)
Query: 31 QKGAHFGQH---------LSQFGTNREVSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHV 81
QK A+ GQH + G + SG +++ H GV+KR+ VED V
Sbjct: 31 QKIAYSGQHGFGPYGMGLEDRLGLYQSSSGTLSHDIQMSDEHSGGVKKRKGVED----CV 86
Query: 82 STSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKP---AEQNSQPPEPPKQD 138
+ G+ +T GS +S E + P ++++S + K+D
Sbjct: 87 TLLPNAGDQ-----------QTEGSSQPERNSMEEGN-RKISPKIQSKEDSSDGDGTKED 134
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
Y+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+QSL
Sbjct: 135 YVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSL 194
Query: 199 QRQ--FLSMKLEAVNTRMNPGIE 219
QRQ FLSMKL VN + IE
Sbjct: 195 QRQVEFLSMKLSTVNPELGFDIE 217
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 104/159 (65%), Gaps = 9/159 (5%)
Query: 63 HGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV 122
H GV+KR+ D A ++S G++ + + S RD+ + S
Sbjct: 66 HSGGVKKRKGTNDCIALLNPSASSKNVGDQQTEVSSQPESNSMERDNR-------KISPK 118
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
++++S + K++Y+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGCNK+
Sbjct: 119 TQSKEDSSDGDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKIT 178
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
GKA++LDEIINY+QSLQRQ FLSMKL VN + IE
Sbjct: 179 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIE 217
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
N+ K + +P + K +Q P + P YIHVRARRGQATDSHSLAER RREKISERMK
Sbjct: 141 NNEVKEDKKPKAEK-KDQKKVPDQEPPTGYIHVRARRGQATDSHSLAERVRREKISERMK 199
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
ILQ LVPGC+KV GKAL+LDEIINY+QSLQ Q FLSMKL +VN
Sbjct: 200 ILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVN 243
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 99 KRIKTSGSRDDNHHSKAE---AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSL 155
K+IK + + K+ E SS E + E K DYIHVRARRGQATD HSL
Sbjct: 139 KKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSL 198
Query: 156 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR 213
AERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQ FLSMKL +N
Sbjct: 199 AERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPE 258
Query: 214 MNPGIEVFPPKDF 226
+ +E K F
Sbjct: 259 LELAVEDVSVKQF 271
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 99 KRIKTSGSRDDNHHSKAE---AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSL 155
K+IK + + K+ E SS E + E K DYIHVRARRGQATD HSL
Sbjct: 139 KKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSL 198
Query: 156 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR 213
AERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQ FLSMKL +N
Sbjct: 199 AERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPE 258
Query: 214 MNPGIEVFPPKDF 226
+ +E K F
Sbjct: 259 LELAVEDVSVKQF 271
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 74/88 (84%), Gaps = 2/88 (2%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
E N + E KQDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC KV GKA
Sbjct: 372 ENNQKAKEFSKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKA 431
Query: 186 LVLDEIINYIQSLQRQF--LSMKLEAVN 211
++LDEIINY+QSLQRQ LSMK+ +VN
Sbjct: 432 VMLDEIINYVQSLQRQVESLSMKVASVN 459
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
Query: 117 AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
E SS E + E K DYIHVRARRGQATD HSLAERARREKIS++MK LQDLVP
Sbjct: 162 TEASSDTSKEISKGASESQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDLVP 221
Query: 177 GCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
GCNKV GKA +LDEIINY+QSLQRQ FLSMKL +N + +E K F
Sbjct: 222 GCNKVTGKAGMLDEIINYVQSLQRQVEFLSMKLAVLNPELELAVEDLSVKQF 273
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 71/82 (86%), Gaps = 2/82 (2%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
PE P YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEI
Sbjct: 154 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 213
Query: 192 INYIQSLQRQ--FLSMKLEAVN 211
INY+QSLQ Q FLSMKL +VN
Sbjct: 214 INYVQSLQNQVEFLSMKLASVN 235
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 99 KRIKTSGSRDDNHHSKAE---AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSL 155
K+IK + + K+ E SS E + E K DYIHVRARRGQATD HSL
Sbjct: 122 KKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSL 181
Query: 156 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR 213
AERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQ FLSMKL +N
Sbjct: 182 AERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPE 241
Query: 214 MNPGIEVFPPKDF 226
+ +E K F
Sbjct: 242 LELAVEDVSVKQF 254
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 86/122 (70%), Gaps = 17/122 (13%)
Query: 138 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 197
+YIHVRARRGQATDSHSLAER RREKI++RMK LQDLVP CNKV GKA++LDEIINY+QS
Sbjct: 292 NYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQS 351
Query: 198 LQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWL 255
LQ Q FLSMKL VN +++ I+ F K+ + +F + GM SP +
Sbjct: 352 LQHQVEFLSMKLATVNPKLDFNIDNFFAKEMS-GSFSSKGM--------------SPTYF 396
Query: 256 HM 257
H+
Sbjct: 397 HL 398
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K+ Y HVRAR+GQAT++HSLAER RREKISERMK+LQDLVPGC+KV GKAL+LDEII
Sbjct: 167 EAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEII 226
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
NY+QSLQRQ FLSMKL AVN R++ IE
Sbjct: 227 NYVQSLQRQVEFLSMKLSAVNPRIDLDIE 255
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 71/82 (86%), Gaps = 2/82 (2%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
PE P YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEI
Sbjct: 137 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 196
Query: 192 INYIQSLQRQ--FLSMKLEAVN 211
INY+QSLQ Q FLSMKL +VN
Sbjct: 197 INYVQSLQNQVEFLSMKLASVN 218
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEII
Sbjct: 160 ELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEII 219
Query: 193 NYIQSLQRQ--FLSMKLEAVNTR 213
NY+QSLQRQ FLSMKL VN R
Sbjct: 220 NYVQSLQRQIEFLSMKLAVVNPR 242
>gi|339716186|gb|AEJ88332.1| putative MYC protein, partial [Tamarix hispida]
Length = 181
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 104/167 (62%), Gaps = 10/167 (5%)
Query: 2 DQGSYNFAEIWQFPVPGSGSMSESGGGLGQKG----AHFGQHLSQFGTNREVSGDDPVNL 57
D SYN +EIW P+ GSG + + G ++G + GQ + NREV G+ + L
Sbjct: 20 DTASYNLSEIWPLPINGSGRVGAADGLELRRGPFGSTNLGQLVEAANLNREVCGNGYLVL 79
Query: 58 EHKM-AHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAE 116
E G RKRR+VEDE+A VS G GN V++ GKR+K+SG D+N +SK +
Sbjct: 80 EQAGGCCGGTARKRREVEDEAANGVS----GGGGNYVHEG-GKRLKSSGPNDENQNSKVD 134
Query: 117 AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREK 163
AE + K QN++ P P +DYIHVRARRGQATDSHSLAERARREK
Sbjct: 135 AELGTGKETMQNTKSPPDPSKDYIHVRARRGQATDSHSLAERARREK 181
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
Query: 99 KRIKTSGSRDDNHHSKAE---AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSL 155
K+IK + + K+ E SS E + E K DYIHVRARRGQATD HSL
Sbjct: 139 KKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSL 198
Query: 156 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTR 213
AERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQ FLSMKL +N
Sbjct: 199 AERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPE 258
Query: 214 MNPGIE 219
+ +E
Sbjct: 259 LELAVE 264
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 94/130 (72%), Gaps = 7/130 (5%)
Query: 98 GKRIKTSGSRDDNHHSKAEA-----EPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDS 152
G + K SG + HS+ E S++ A + + + +++Y+HVRA+RGQAT+S
Sbjct: 579 GSKRKGSGEGSSSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNS 638
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQ FLSMKL +
Sbjct: 639 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTI 698
Query: 211 NTRMNPGIEV 220
+ +N +++
Sbjct: 699 SPELNSDLDL 708
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 94/130 (72%), Gaps = 7/130 (5%)
Query: 98 GKRIKTSGSRDDNHHSKAEA-----EPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDS 152
G + K SG + HS+ E S++ A + + + +++Y+HVRA+RGQAT+S
Sbjct: 579 GSKRKGSGEGSSSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNS 638
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQ FLSMKL +
Sbjct: 639 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTI 698
Query: 211 NTRMNPGIEV 220
+ +N +++
Sbjct: 699 SPELNSDLDL 708
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 75/86 (87%), Gaps = 2/86 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLDEIIN++
Sbjct: 195 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHV 254
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPGIE 219
QSLQRQ FLSM+L AVN R++ IE
Sbjct: 255 QSLQRQVEFLSMRLAAVNPRVDFNIE 280
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 103/159 (64%), Gaps = 15/159 (9%)
Query: 63 HGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV 122
H V+KR+ VED ++D+ ++ K S + N + + S
Sbjct: 40 HSGVVKKRKGVEDCVT-------------LLHDAGDQQTKGSPQPERNSVEEGNRKISPK 86
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
++++S + K+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+
Sbjct: 87 MQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKIT 146
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
GKA++LDEIINY+QSLQRQ FLSMKL VN + IE
Sbjct: 147 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIE 185
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 84/102 (82%), Gaps = 2/102 (1%)
Query: 121 SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
S++ A++ + ++DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK
Sbjct: 107 SMECADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNK 166
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEV 220
+ GKA++LDEIINY+QSLQRQ FLSMKL A+ +N +++
Sbjct: 167 ITGKAMMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDLDL 208
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
+PPKQ +IHVRARRGQATD HSLAERARREKIS RMK LQ LVPGC++V GKA++L+EII
Sbjct: 141 QPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEII 200
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
NY++SLQRQ FLSMKL AV+ R++ +E
Sbjct: 201 NYVKSLQRQIEFLSMKLAAVDPRVDTNVE 229
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K+ Y+HVRAR QAT+SHS+AE+ RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+
Sbjct: 142 KEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYV 201
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
QSLQRQ FLSMKL VN R+ IE+ KD ++ ++ P
Sbjct: 202 QSLQRQVEFLSMKLSTVNPRLGVDIELLLAKDILPFSWASSTGPM 246
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
+PPKQ +IHVRARRGQAT+SHSLAERARREKIS RMK LQ LVPGC++V GKA++L+EII
Sbjct: 10 QPPKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEII 69
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
NY++SLQRQ FLSMKL AV+ R++ +E
Sbjct: 70 NYVKSLQRQIEFLSMKLAAVDPRLDTNVE 98
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 93/133 (69%), Gaps = 5/133 (3%)
Query: 113 SKAEAEPSSVK--PAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 170
+K +AE +S K PA S K DYIHVRARRGQATDSHSLAER RRE+ISERM+
Sbjct: 133 AKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRY 192
Query: 171 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGI-EVFPPKDFT 227
LQ+LVPGCNKV GKA +LDEIINY+QSLQ+Q FLSMK+ A N +N I E + +
Sbjct: 193 LQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLS 252
Query: 228 QQTFDTAGMPFVS 240
Q + A +P ++
Sbjct: 253 QAACNPAALPAMA 265
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 93/133 (69%), Gaps = 5/133 (3%)
Query: 113 SKAEAEPSSVK--PAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 170
+K +AE +S K PA S K DYIHVRARRGQATDSHSLAER RRE+ISERM+
Sbjct: 133 AKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRY 192
Query: 171 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGI-EVFPPKDFT 227
LQ+LVPGCNKV GKA +LDEIINY+QSLQ+Q FLSMK+ A N +N I E + +
Sbjct: 193 LQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLS 252
Query: 228 QQTFDTAGMPFVS 240
Q + A +P ++
Sbjct: 253 QAACNPAALPAMA 265
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 75/86 (87%), Gaps = 2/86 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+
Sbjct: 134 KEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYV 193
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPGIE 219
QSLQRQ FLSMKL VN + IE
Sbjct: 194 QSLQRQVEFLSMKLATVNPELGFDIE 219
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 72/80 (90%), Gaps = 3/80 (3%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPPK DYIHVRARRGQATDSHSLAER RREKISERM+ LQ+LVPGC+KV GKAL+LDEII
Sbjct: 129 EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEII 187
Query: 193 NYIQSLQRQ--FLSMKLEAV 210
NY+Q+LQ Q FLSMKL ++
Sbjct: 188 NYVQTLQNQVEFLSMKLTSI 207
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 78/95 (82%), Gaps = 6/95 (6%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEII
Sbjct: 172 EPPA-GYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEII 230
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRM---NPGIEVFP 222
+Y+QSLQ Q FLSMKL ++N M PGI++ P
Sbjct: 231 SYVQSLQNQVEFLSMKLASLNPLMYEFGPGIDMHP 265
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 88/130 (67%), Gaps = 9/130 (6%)
Query: 114 KAEAEPSSVKPAEQN----SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
KAE E S + N E K DYIHVRARRG+ATD HSLAERARREKIS++MK
Sbjct: 109 KAEDETESSMKGKTNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMK 168
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFT 227
LQD+VPGCNKV GKA +LDEIINY+QSLQ+Q FLSMKL +N + I+ K F
Sbjct: 169 CLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF- 227
Query: 228 QQTFDTAGMP 237
Q + T G+P
Sbjct: 228 -QAYFT-GLP 235
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 97/136 (71%), Gaps = 11/136 (8%)
Query: 98 GKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPP---EPPKQDYIHVRARRGQATDSHS 154
GKR K SG + HS+ +V E NS+ E ++DY+H+RA+RGQAT++HS
Sbjct: 74 GKR-KGSGEGSSSMHSQEGT--GAVSKREVNSEKAGDAESNREDYVHIRAKRGQATNNHS 130
Query: 155 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
LAER RREKI+ERMK LQDLVPGCNK+ GKA++LDEIINY+QSLQRQ FLSMKL AV+
Sbjct: 131 LAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAVSP 190
Query: 213 RMNPGI---EVFPPKD 225
+N + ++ P+D
Sbjct: 191 ELNCDLDFQDILCPQD 206
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 68/75 (90%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
YIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC++V GKALVLDEIINY+QSL
Sbjct: 142 YIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSL 201
Query: 199 QRQ--FLSMKLEAVN 211
Q Q FLSMKL +VN
Sbjct: 202 QNQVEFLSMKLASVN 216
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 94/130 (72%), Gaps = 7/130 (5%)
Query: 98 GKRIKTSGSRDDNHHSKAEA-----EPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDS 152
G + K SG + HS+ E S++ A + + + +++Y+HVRA+RGQAT+S
Sbjct: 76 GSKRKGSGEGSSSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNS 135
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
HSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQ FLSMKL +
Sbjct: 136 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTI 195
Query: 211 NTRMNPGIEV 220
+ +N +++
Sbjct: 196 SPELNSDLDL 205
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 75/86 (87%), Gaps = 2/86 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+
Sbjct: 25 KEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYV 84
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPGIE 219
QSLQRQ FLSMKL VN + IE
Sbjct: 85 QSLQRQVEFLSMKLSTVNPELGFDIE 110
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 95/140 (67%), Gaps = 11/140 (7%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLDEII
Sbjct: 188 EAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEII 247
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIE-VFPPK--DFTQQTFDTAGMPFV------SQ 241
+++QSLQRQ FLSM+L AVN R++ ++ + P+ F + MP + ++
Sbjct: 248 SHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLLAPESGSLVDSNFPSMVMPLMWPDVQANE 307
Query: 242 ATREYSRGTSPDWLHMQIGG 261
+ Y + + D LH + G
Sbjct: 308 NRQPYQQLWNDDTLHQPVWG 327
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/81 (80%), Positives = 70/81 (86%), Gaps = 2/81 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E P YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEII
Sbjct: 162 EEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEII 221
Query: 193 NYIQSLQRQ--FLSMKLEAVN 211
NY+QSLQ Q FLSMKL +VN
Sbjct: 222 NYVQSLQNQVEFLSMKLASVN 242
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/80 (77%), Positives = 70/80 (87%), Gaps = 2/80 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E P DYIHVRARRGQATDSHSLAER RREKISERM+ LQ+LVPGC+KV GKAL+LDEII
Sbjct: 127 EEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEII 186
Query: 193 NYIQSLQRQ--FLSMKLEAV 210
NY+Q+LQ Q FLSMKL ++
Sbjct: 187 NYVQTLQTQVEFLSMKLTSI 206
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEII
Sbjct: 116 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 175
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
NY+QSLQ+Q FLSMKL +N + I+ K F
Sbjct: 176 NYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 211
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEII
Sbjct: 128 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 187
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
NY+QSLQ+Q FLSMKL +N + I+ K F
Sbjct: 188 NYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 223
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEII
Sbjct: 116 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 175
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
NY+QSLQ+Q FLSMKL +N + I+ K F
Sbjct: 176 NYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 211
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats.
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 2/81 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
QDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+K+ GKA++L+EIINY+Q
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 197 SLQRQ--FLSMKLEAVNTRMN 215
SLQRQ FLSMKL AV+ R++
Sbjct: 61 SLQRQIEFLSMKLAAVDPRLD 81
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEII
Sbjct: 132 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
NY+QSLQ+Q FLSMKL +N + I+ K F
Sbjct: 192 NYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 227
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEII
Sbjct: 132 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
NY+QSLQ+Q FLSMKL +N + I+ K F
Sbjct: 192 NYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 227
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
YIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKAL+LDEIINY+QSL
Sbjct: 150 YIHVRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSL 209
Query: 199 QRQ--FLSMKLEAVN 211
Q Q FLSMKL ++N
Sbjct: 210 QNQVEFLSMKLTSLN 224
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEII
Sbjct: 132 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
NY+QSLQ+Q FLSMKL +N + I+ K F
Sbjct: 192 NYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQF 227
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEIINY+QSL
Sbjct: 161 YIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSL 220
Query: 199 QRQ--FLSMKLEAVN 211
Q Q FLSMKL ++N
Sbjct: 221 QNQVEFLSMKLASLN 235
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 87/128 (67%), Gaps = 13/128 (10%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEII
Sbjct: 132 EIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEII 191
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVF---------PPKDFTQQTF--DTAGMPFV 239
NY+QSLQ+Q FLSMKL +N + I+ PP+ ++Q+ D P
Sbjct: 192 NYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQAYFTGPPEGDSKQSIMADFRSFPLH 251
Query: 240 SQATREYS 247
Q + +YS
Sbjct: 252 QQGSLDYS 259
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 77/87 (88%), Gaps = 2/87 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
+++Y+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+
Sbjct: 622 REEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYV 681
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPGIEV 220
QSLQRQ FLSMKL ++ +N +++
Sbjct: 682 QSLQRQVEFLSMKLSTISPELNSDLDL 708
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/81 (80%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPP YIHVRARRGQATDSHSLAER RRE+ISERMKILQ LVPGC+K+ GKAL+LDEII
Sbjct: 166 EPPA-GYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEII 224
Query: 193 NYIQSLQRQ--FLSMKLEAVN 211
NY+QSLQ Q FLSMKL +VN
Sbjct: 225 NYVQSLQNQVEFLSMKLASVN 245
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 114/193 (59%), Gaps = 29/193 (15%)
Query: 92 RVNDSDGK---RIKTSGSRDDNHHSKAEAEPSSVKPAE--QNSQPPEPPKQDYIHVRARR 146
R + SDG +++ G++ + K++ +P + + E + +Q E YIHVRARR
Sbjct: 80 RKDKSDGSCMTSVQSKGTKRETKSRKSQKKPKANESDEMKERTQEEEEAPVGYIHVRARR 139
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLS 204
GQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKA++LDEIINY+QSLQ Q FLS
Sbjct: 140 GQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFLS 199
Query: 205 MKLEAVNTRMNP-GIEV------------FPPKDFTQQTFDTAGMPF----VSQATREYS 247
MKL V+ + G+++ FP Q +PF + TR YS
Sbjct: 200 MKLATVSPMLYEFGLDIEGQMNDLERVGSFPQDS---QLLVPKTIPFQHRVCEEDTRSYS 256
Query: 248 RG--TSPDWLHMQ 258
G ++P LH Q
Sbjct: 257 IGETSAPFLLHDQ 269
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/117 (63%), Positives = 87/117 (74%), Gaps = 6/117 (5%)
Query: 113 SKAEAEPSSVK--PAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 170
+K +AE +S K PA S K DYIHVRARRGQATDSHSLAER RRE+ISERM+
Sbjct: 133 AKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRY 192
Query: 171 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGI--EVFPP 223
LQ+LVPGCNKV GKA +LDEIINY+QSLQ+Q FLSMK+ A N +N I ++F P
Sbjct: 193 LQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDLFGP 249
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 93/132 (70%), Gaps = 5/132 (3%)
Query: 83 TSSGNGNGNRVNDSD-GKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIH 141
TSSG+ R + D G ++ S+D N SK ++ S K + + E + YIH
Sbjct: 53 TSSGDNKACRKHKEDSGASFSSARSKDSN--SKESSKRSGGKRDRSSKKVDEEEPKGYIH 110
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD+HSLAER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ Q
Sbjct: 111 VRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 170
Query: 202 --FLSMKLEAVN 211
FLSM++ +++
Sbjct: 171 VEFLSMRIASLS 182
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 78/95 (82%), Gaps = 6/95 (6%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEII
Sbjct: 172 EPPA-GYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEII 230
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRM---NPGIEVFP 222
+Y+QSLQ Q FLSMKL +++ M PGI++ P
Sbjct: 231 SYVQSLQNQVEFLSMKLASLSPLMYEFGPGIDMHP 265
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 77/93 (82%), Gaps = 2/93 (2%)
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
+P ++DYIH+R+RRGQAT+SHSLAER RREKISERMK+LQDLVPGCNKV GKALVL+
Sbjct: 100 EPKNKSQKDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLE 159
Query: 190 EIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEV 220
IINY+QSLQ Q LS+KL +V +R + +++
Sbjct: 160 NIINYVQSLQSQVEILSVKLTSVLSRCHFDLQI 192
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+
Sbjct: 144 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYV 203
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPGI--EVFPPKDFTQQTFDTAGMPFVS 240
QSLQ+Q FLSMK+ A N +N I ++F + +Q A +P ++
Sbjct: 204 QSLQKQVEFLSMKIAAANPVVNFNIVDDLFGGRRMSQPCGPAAALPAMT 252
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P YIHVRARRGQATDSHSLAER RREKISERM +LQ LVPGC+KV GKALVL+EIINY
Sbjct: 112 PSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINY 171
Query: 195 IQSLQRQ--FLSMKLEAVN 211
+QSLQ Q FLSMKL +VN
Sbjct: 172 VQSLQHQVEFLSMKLASVN 190
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 96/154 (62%), Gaps = 10/154 (6%)
Query: 75 DESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEP 134
DE + +S + + + K+IKT + + K S++ E +S+ +P
Sbjct: 82 DEVNRAISFQNKRKPEGKTEKREKKKIKTEAETETSMKGK-----SNMSNTETSSEIQKP 136
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGC KV GKA +LDEIINY
Sbjct: 137 ---DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINY 193
Query: 195 IQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
+QSLQ+Q FLSMKL +N + I K F
Sbjct: 194 VQSLQQQVEFLSMKLSVLNPELEFHINELSTKQF 227
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 72/79 (91%), Gaps = 2/79 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
Y+HVRARRGQATDSHSLAERARREKI++RMK+LQ+LVPGCNK+ G ALVLDEIIN++QSL
Sbjct: 174 YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSL 233
Query: 199 QRQ--FLSMKLEAVNTRMN 215
Q Q FLSM+L AVN R++
Sbjct: 234 QCQVEFLSMRLAAVNPRID 252
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 95/152 (62%), Gaps = 19/152 (12%)
Query: 83 TSSGNGNGNRVNDS------DGKRIKTSGSRDDNHHSKAEAEPSSVKPA----------- 125
+ SG G+ R +D+ + KR + + S +P KPA
Sbjct: 85 SCSGGGSTKRKSDAYLDAKGECKRPRGKQQVCELDQSSGRGKPEKAKPAGTRKKGDVAAQ 144
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
+Q+ + K DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA
Sbjct: 145 KQDPRAAGGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKA 204
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN 215
+LDEIINY+QSLQ+Q FLSMK+ A N +N
Sbjct: 205 GMLDEIINYVQSLQKQVEFLSMKIAASNPVVN 236
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 82/105 (78%), Gaps = 9/105 (8%)
Query: 138 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 197
DY+HVRARRG+ATDSHSLAERARREKISERMK LQ+LVPGCNK+ GKA +LDEIINY+QS
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 198 LQRQ--FLSMKLEAVNTRMN-------PGIEVFPPKDFTQQTFDT 233
LQ+Q FLSMK+ A+N R++ ++FP + ++DT
Sbjct: 62 LQQQVEFLSMKVAALNHRVDFINVDDLLAKQMFPTITDNRSSYDT 106
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 78/97 (80%), Gaps = 2/97 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K Y+HVRARRGQATDSHSLAERARREKI++RMK+LQ+LVPGCNK+ G ALVLDEII
Sbjct: 173 EEEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEII 232
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFT 227
N++Q LQRQ LSM+L AVN R++ ++ +F+
Sbjct: 233 NHVQFLQRQVEILSMRLAAVNPRIDFNLDSMLSAEFS 269
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
Query: 106 SRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 165
S+D K+ + K E+ S + P + YIHVRARRGQATDSHSLAER RRE+IS
Sbjct: 87 SKDSCKDGKSRRGKKASKEVEEKSTTEDEPPKGYIHVRARRGQATDSHSLAERVRRERIS 146
Query: 166 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
ERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ Q FLSM++ +++
Sbjct: 147 ERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMS 194
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 83/102 (81%), Gaps = 4/102 (3%)
Query: 121 SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
S++ A++N+ + ++DY HVRA+RGQAT+SHSLAER RREKI+ RMK+LQDLVPGCNK
Sbjct: 135 SMECADENAAGAK--REDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNK 192
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEV 220
+ GKA++LDEIINY+QSLQRQ FLSMKL A+ N +E+
Sbjct: 193 ITGKAMMLDEIINYVQSLQRQVEFLSMKLSAIRPGFNRDLEL 234
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 86/122 (70%), Gaps = 7/122 (5%)
Query: 77 SAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPK 136
SA+ VSTS G+G G + D++ KR K + S DDN + +AE S ++ Q P PPK
Sbjct: 56 SARPVSTSGGSG-GQDLTDAEAKRFKANKSSDDNGSFRKDAEADSRNASKAVDQNPPPPK 114
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
QD+IHVRARRGQATDSHSLAERARREKI+ERMKILQDLVPGCNK++ L Y Q
Sbjct: 115 QDFIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKLMRPWL------GYWQ 168
Query: 197 SL 198
S+
Sbjct: 169 SI 170
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 83/102 (81%), Gaps = 4/102 (3%)
Query: 121 SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
S++ A++N+ + ++DY HVRA+RGQAT+SHSLAER RREKI+ RMK+LQDLVPGCNK
Sbjct: 135 SMECADENAAGAK--REDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNK 192
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEV 220
+ GKA++LDEIINY+QSLQRQ FLSMKL A+ N +E+
Sbjct: 193 ITGKAMMLDEIINYVQSLQRQVEFLSMKLSAIRPGFNRDLEL 234
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
YIHVRARRGQATDSHSLAER RREKISERMK LQ LVPGC+KV GKAL+LDEIINY+QSL
Sbjct: 145 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSL 204
Query: 199 QRQ--FLSMKLEAVN 211
Q Q FLSMKL ++N
Sbjct: 205 QNQVEFLSMKLASLN 219
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
YIHVRARRGQATDSHSLAER RREKISERMK LQ LVPGC+KV GKAL+LDEIINY+QSL
Sbjct: 177 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSL 236
Query: 199 QRQ--FLSMKLEAVN 211
Q Q FLSMKL ++N
Sbjct: 237 QNQVEFLSMKLASLN 251
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%), Gaps = 2/88 (2%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
E++S E + YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKA
Sbjct: 109 EKSSTDQEEAPKGYIHVRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKA 168
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAVN 211
L+LDEIINY+QSLQ Q FLSM++ +++
Sbjct: 169 LILDEIINYVQSLQNQVEFLSMRIASMS 196
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E P YIHVRARRGQATDSHSLAER RREKIS+RM LQ LVPGC+KV GKALVLDEII
Sbjct: 129 EDPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEII 188
Query: 193 NYIQSLQRQ--FLSMKLEAVN 211
NY+QSLQ Q FLSMKL +VN
Sbjct: 189 NYVQSLQNQVEFLSMKLASVN 209
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 75/91 (82%), Gaps = 2/91 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEII
Sbjct: 191 ETEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEII 250
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPGIEVF 221
N++QSLQRQ LSM+L AVN R++ ++
Sbjct: 251 NHVQSLQRQVEMLSMRLAAVNPRIDFNLDTI 281
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/79 (82%), Positives = 68/79 (86%), Gaps = 4/79 (5%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
NS+ E P DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA +
Sbjct: 117 NSKASEKP--DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGM 174
Query: 188 LDEIINYIQSLQRQ--FLS 204
LDEIINY+QSLQRQ FLS
Sbjct: 175 LDEIINYVQSLQRQVEFLS 193
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 92/132 (69%), Gaps = 5/132 (3%)
Query: 83 TSSGNGNGNRVNDSD-GKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIH 141
TSS + R + D G ++ S+D N SK ++ S K + + E + YIH
Sbjct: 53 TSSDDNKACRKHKEDSGASFSSARSKDSN--SKESSKRSGGKRDRSSKKVDEEEPKGYIH 110
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD+HSLAER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ Q
Sbjct: 111 VRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 170
Query: 202 --FLSMKLEAVN 211
FLSM++ +++
Sbjct: 171 VEFLSMRIASLS 182
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/70 (85%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPPK DYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGC+KV GKA++LDEII
Sbjct: 248 EPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEII 306
Query: 193 NYIQSLQRQF 202
NY+QSLQRQ
Sbjct: 307 NYVQSLQRQV 316
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 196 QSLQRQ--FLSMKLEAVN 211
QSLQ+Q FLSMK+ A N
Sbjct: 200 QSLQKQVEFLSMKIAASN 217
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKALVLDEII
Sbjct: 103 EEPK-GYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEII 161
Query: 193 NYIQSLQRQ--FLSMKLEAVN 211
NY+QSLQ Q FLSMK+ +++
Sbjct: 162 NYVQSLQNQVEFLSMKIASLS 182
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 72/82 (87%), Gaps = 2/82 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHV 257
Query: 196 QSLQRQ--FLSMKLEAVNTRMN 215
QSLQRQ LSM+L AVN R++
Sbjct: 258 QSLQRQVEMLSMRLAAVNPRID 279
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 72/82 (87%), Gaps = 2/82 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHV 257
Query: 196 QSLQRQ--FLSMKLEAVNTRMN 215
QSLQRQ LSM+L AVN R++
Sbjct: 258 QSLQRQVEMLSMRLAAVNPRID 279
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 95/146 (65%), Gaps = 18/146 (12%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ 127
RKR+ ED + +S++ + + +S +R K +++ N K+ E + +
Sbjct: 81 RKRKPAEDSAT--LSSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATR---- 134
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKAL+
Sbjct: 135 ----------GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALI 184
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVN 211
LDEIINY+QSLQ Q FLSM++ +++
Sbjct: 185 LDEIINYVQSLQNQVEFLSMRIASMS 210
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKALVLDEII
Sbjct: 113 EEPK-GYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEII 171
Query: 193 NYIQSLQRQ--FLSMKLEAVN 211
NY+QSLQ Q FLSMK+ +++
Sbjct: 172 NYVQSLQNQVEFLSMKIASLS 192
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 95/146 (65%), Gaps = 18/146 (12%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ 127
RKR+ ED + +S++ + + +S +R K +++ N K+ E + +
Sbjct: 81 RKRKPAEDSAT--LSSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATR---- 134
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKAL+
Sbjct: 135 ----------GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALI 184
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVN 211
LDEIINY+QSLQ Q FLSM++ +++
Sbjct: 185 LDEIINYVQSLQNQVEFLSMRIASMS 210
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 196 QSLQRQ--FLSMKLEAVN 211
QSLQ+Q FLSMK+ A N
Sbjct: 200 QSLQKQVEFLSMKIAASN 217
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 82/107 (76%), Gaps = 8/107 (7%)
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
K +E+N + P Y+HVRARRGQATDSHSLAERARREKI+ RMK+L++LVPGC+K+
Sbjct: 20 KSSEENGKLP------YVHVRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQ 73
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFT 227
G ALVLDEIIN++QSLQRQ LSM+L AVN R++ ++ + +
Sbjct: 74 GTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTLLASEVS 120
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKALVLDEII
Sbjct: 112 EEPK-GYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEII 170
Query: 193 NYIQSLQRQ--FLSMKLEAVN 211
NY+QSLQ Q FLSMK+ +++
Sbjct: 171 NYVQSLQNQVEFLSMKIASLS 191
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 92/146 (63%), Gaps = 23/146 (15%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ 127
RKR+ ED + + SS + +S KR G R + K E+
Sbjct: 69 RKRKATEDSA----TLSSAQSKDCKQQESKSKR----GKRPN-------------KETEE 107
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
S + + YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKAL+
Sbjct: 108 KSTTEDEATKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALI 167
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVN 211
LDEIINY+QSLQ Q FLSM++ +++
Sbjct: 168 LDEIINYVQSLQNQVEFLSMRIASMS 193
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 66/74 (89%), Gaps = 4/74 (5%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
NS+PPE DYIHVRAR+GQATDSHSL ER RREKISERMK+LQ+LVPGCNKV GKA +
Sbjct: 122 NSKPPE----DYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFM 177
Query: 188 LDEIINYIQSLQRQ 201
LDEIINY+QSLQRQ
Sbjct: 178 LDEIINYVQSLQRQ 191
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 74/84 (88%), Gaps = 2/84 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++
Sbjct: 174 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHV 233
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPG 217
QSLQRQ +LSM+L AVN R++ G
Sbjct: 234 QSLQRQVEYLSMRLAAVNPRVDFG 257
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 74/84 (88%), Gaps = 2/84 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++
Sbjct: 187 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHV 246
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPG 217
QSLQRQ +LSM+L AVN R++ G
Sbjct: 247 QSLQRQVEYLSMRLAAVNPRVDFG 270
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 71/82 (86%), Gaps = 2/82 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G A+VLDEIIN++
Sbjct: 200 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHV 259
Query: 196 QSLQRQ--FLSMKLEAVNTRMN 215
QSLQRQ LSMKL AVN R++
Sbjct: 260 QSLQRQVEILSMKLAAVNPRID 281
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 196
Query: 196 QSLQRQ--FLSMKLEAVN 211
QSLQ+Q FLSMK+ A N
Sbjct: 197 QSLQKQVEFLSMKIAASN 214
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 71/82 (86%), Gaps = 2/82 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G A+VLDEIIN++
Sbjct: 194 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHV 253
Query: 196 QSLQRQ--FLSMKLEAVNTRMN 215
QSLQRQ LSMKL AVN R++
Sbjct: 254 QSLQRQVEILSMKLAAVNPRID 275
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 72/79 (91%), Gaps = 2/79 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++QSL
Sbjct: 4 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSL 63
Query: 199 QR--QFLSMKLEAVNTRMN 215
QR +FLSM+L AVN R++
Sbjct: 64 QREVEFLSMRLAAVNPRID 82
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 196
Query: 196 QSLQRQ--FLSMKLEAVN 211
QSLQ+Q FLSMK+ A N
Sbjct: 197 QSLQKQVEFLSMKIAASN 214
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 196
Query: 196 QSLQRQ--FLSMKLEAVN 211
QSLQ+Q FLSMK+ A N
Sbjct: 197 QSLQKQVEFLSMKIAASN 214
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 75/87 (86%), Gaps = 2/87 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEII
Sbjct: 71 EDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEII 130
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMNPG 217
N++QSLQRQ +LSM+L AVN R++ G
Sbjct: 131 NHVQSLQRQVEYLSMRLAAVNPRVDFG 157
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+
Sbjct: 147 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 206
Query: 196 QSLQRQ--FLSMKLEAVN 211
QSLQ+Q FLSMK+ A N
Sbjct: 207 QSLQKQVEFLSMKIAASN 224
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKAL+LDEII
Sbjct: 101 EEPK-GYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEII 159
Query: 193 NYIQSLQRQ--FLSMKLEAVN 211
NY+QSLQ Q FLSM++ +++
Sbjct: 160 NYVQSLQNQVEFLSMRIASLS 180
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 83/141 (58%), Gaps = 49/141 (34%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERA--------------------------------R 160
EPPK DYIHVRARRGQATDSHSLAER R
Sbjct: 149 EPPK-DYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVR 207
Query: 161 REKISERMKILQDLVPGCNK--------------VIGKALVLDEIINYIQSLQRQ--FLS 204
REKISERMK+LQDLVPGCNK V GKA++LDEIINY+QSLQRQ FLS
Sbjct: 208 REKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLS 267
Query: 205 MKLEAVNTRMNPGIEVFPPKD 225
MKL VN +++ ++ F PKD
Sbjct: 268 MKLSTVNPQLDFDVDNFIPKD 288
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 2/84 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEII
Sbjct: 175 ESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEII 234
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRM 214
N++QSLQRQ LSM+L AVN R+
Sbjct: 235 NHVQSLQRQVEMLSMRLAAVNPRV 258
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 76/90 (84%), Gaps = 2/90 (2%)
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
K A+ SQ + PK++YIHV+ARRG+A ++HSLAER RREKISERMK+LQ LVPGC+++
Sbjct: 186 KKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQIT 245
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
GK +VLDEIINY+QSLQ+Q FLSMKL +V
Sbjct: 246 GKTVVLDEIINYVQSLQQQVEFLSMKLASV 275
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC K+ G ALVLDEIIN++
Sbjct: 167 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHV 226
Query: 196 QSLQRQ--FLSMKLEAVNTRMN 215
Q+LQRQ LSMKL AVN R++
Sbjct: 227 QTLQRQVEILSMKLAAVNPRID 248
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 73/85 (85%), Gaps = 2/85 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEII
Sbjct: 176 ESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEII 235
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMN 215
N++Q+LQRQ LSM+L AVN R++
Sbjct: 236 NHVQTLQRQVEMLSMRLAAVNPRID 260
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 95/146 (65%), Gaps = 18/146 (12%)
Query: 68 RKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ 127
RKR+ ED + +S++ + + +S +R K +++ N K+ E + +
Sbjct: 81 RKRKPAEDSAT--LSSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATR---- 134
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKAL+
Sbjct: 135 ----------GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALI 184
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVN 211
LDEIINY+QSLQ Q FLSM++ +++
Sbjct: 185 LDEIINYVQSLQNQVEFLSMRIASMS 210
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 83/141 (58%), Gaps = 49/141 (34%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERA--------------------------------R 160
EPPK DYIHVRARRGQATDSHSLAER R
Sbjct: 270 EPPK-DYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVR 328
Query: 161 REKISERMKILQDLVPGCNK--------------VIGKALVLDEIINYIQSLQRQ--FLS 204
REKISERMK+LQDLVPGCNK V GKA++LDEIINY+QSLQRQ FLS
Sbjct: 329 REKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLS 388
Query: 205 MKLEAVNTRMNPGIEVFPPKD 225
MKL VN +++ ++ F PKD
Sbjct: 389 MKLSTVNPQLDFDVDNFIPKD 409
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 83/141 (58%), Gaps = 49/141 (34%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERA--------------------------------R 160
EPPK DYIHVRARRGQATDSHSLAER R
Sbjct: 270 EPPK-DYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVR 328
Query: 161 REKISERMKILQDLVPGCNK--------------VIGKALVLDEIINYIQSLQRQ--FLS 204
REKISERMK+LQDLVPGCNK V GKA++LDEIINY+QSLQRQ FLS
Sbjct: 329 REKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLS 388
Query: 205 MKLEAVNTRMNPGIEVFPPKD 225
MKL VN +++ ++ F PKD
Sbjct: 389 MKLSTVNPQLDFDVDNFIPKD 409
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 74/84 (88%), Gaps = 2/84 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++
Sbjct: 101 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHV 160
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPG 217
QSLQRQ +LSM+L AVN R++ G
Sbjct: 161 QSLQRQVEYLSMRLAAVNPRVDFG 184
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 74/84 (88%), Gaps = 2/84 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++
Sbjct: 140 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHV 199
Query: 196 QSLQRQ--FLSMKLEAVNTRMNPG 217
QSLQRQ +LSM+L AVN R++ G
Sbjct: 200 QSLQRQVEYLSMRLAAVNPRVDFG 223
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%), Gaps = 2/88 (2%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
E++S + + YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKA
Sbjct: 115 EKSSTDEDEASKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKA 174
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAVN 211
+VLDEIINY+QSLQ Q FLSM++ +++
Sbjct: 175 MVLDEIINYVQSLQNQVEFLSMRIASMS 202
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 196 QSLQRQ--FLSMKLEAVN 211
QSLQ+Q FLSMK+ A N
Sbjct: 200 QSLQKQVEFLSMKIAASN 217
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 71/84 (84%), Gaps = 2/84 (2%)
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
Q E Q +IHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKAL+LD
Sbjct: 95 QMEEEAPQGFIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILD 154
Query: 190 EIINYIQSLQRQ--FLSMKLEAVN 211
EIINY+QSLQ Q FLSM++ +++
Sbjct: 155 EIINYVQSLQNQVEFLSMRIASLS 178
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 72/85 (84%), Gaps = 2/85 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E K Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G LVLDEII
Sbjct: 176 ESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEII 235
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMN 215
N++Q+LQRQ LSM+L AVN R++
Sbjct: 236 NHVQTLQRQVEMLSMRLAAVNPRID 260
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
K A+ SQ + PK++YIHV+ARRG+A ++HSLAER RREKISERMK+LQ LVPGC+++
Sbjct: 186 KKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQIT 245
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
GK +VLDEIINY+QSLQ+Q LSMKL +V
Sbjct: 246 GKTVVLDEIINYVQSLQQQVELLSMKLASV 275
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 68/75 (90%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
YIHVRARRGQATDSHSL+ER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY++SL
Sbjct: 102 YIHVRARRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSL 161
Query: 199 QRQ--FLSMKLEAVN 211
Q Q FLSM++ +++
Sbjct: 162 QNQVEFLSMRIASLS 176
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 70/80 (87%), Gaps = 2/80 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++
Sbjct: 151 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHV 210
Query: 196 QSLQRQ--FLSMKLEAVNTR 213
QSLQRQ +LSM+L VN R
Sbjct: 211 QSLQRQVEYLSMRLATVNPR 230
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%), Gaps = 2/78 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++
Sbjct: 186 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHV 245
Query: 196 QSLQR--QFLSMKLEAVN 211
QSLQ + LSMKL AVN
Sbjct: 246 QSLQNEVEILSMKLAAVN 263
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%), Gaps = 2/78 (2%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++
Sbjct: 182 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHV 241
Query: 196 QSLQR--QFLSMKLEAVN 211
QSLQ + LSMKL AVN
Sbjct: 242 QSLQNEVEILSMKLAAVN 259
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++QSL
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 216
Query: 199 QR--QFLSMKLEAVN 211
Q + LSMKL AVN
Sbjct: 217 QHEVEILSMKLAAVN 231
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 95/147 (64%), Gaps = 10/147 (6%)
Query: 75 DESAKHVSTS-SGNGNGNRVNDSDGKRIKTSGSR----DDNHHSKAEAEPSSVKPAEQNS 129
D+ + VS SG + + GK++ GSR ++N S E P A+ +
Sbjct: 88 DDKRRMVSIERSGTTSLGSAQEMVGKQLHMDGSRKHQRNNNVASVKEKRPREHGGADVDV 147
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
+ E P YIHVRA+RGQA DSHSLAER RREKISE+M +LQ LVPGC+KV GKA++LD
Sbjct: 148 K--EAPA-GYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLD 204
Query: 190 EIINYIQSLQRQ--FLSMKLEAVNTRM 214
EII+Y+QSLQ Q FLSMKL ++N M
Sbjct: 205 EIISYVQSLQNQVEFLSMKLASLNPMM 231
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
++HVRARRG+ATDSHSLAERARREKISERMK+LQ LVPGC+K+IGK LVLDEIINY++SL
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSL 164
Query: 199 QRQ--FLSMKLEAVN 211
Q Q FL KL +++
Sbjct: 165 QNQVEFLVGKLASIS 179
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
++HVRARRG+ATDSHSLAERARREKISERMK+LQ LVPGC+K+IGK LVLDEIINY++SL
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSL 164
Query: 199 QRQ--FLSMKLEAVN 211
Q Q FL KL +++
Sbjct: 165 QNQVEFLVGKLASIS 179
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 78/95 (82%), Gaps = 7/95 (7%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK--VI 182
AE+N+ + P Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K +
Sbjct: 18 AEENNGGEKLP---YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQIS 74
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN 215
G ALVLD+IIN++QSLQRQ FLSM+L AV R++
Sbjct: 75 GTALVLDKIINHVQSLQRQVEFLSMRLAAVTPRID 109
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
++HVRARRG+ATDSHSLAERARREKISERMK LQ LVPGC+K+IGK LVLDEIINY++SL
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSL 164
Query: 199 QRQ--FLSMKLEAVN 211
Q Q FL KL +++
Sbjct: 165 QNQVEFLVGKLASIS 179
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
++HVRARRG+ATDSHSLAERARREKISERMK LQ LVPGC+K+IGK LVLDEIINY++SL
Sbjct: 39 FVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSL 98
Query: 199 QRQ--FLSMKLEAVN 211
Q Q FL KL +++
Sbjct: 99 QNQVEFLVGKLASIS 113
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 75/97 (77%), Gaps = 10/97 (10%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAER--------ARREKISERMKILQDLVPGCNKVIGK 184
E K Y+HVRARRGQATD+HSLAER ARREKI+ RMK+LQ+LVPGC+K+ G
Sbjct: 120 ESDKLPYVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGT 179
Query: 185 ALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
ALVLDEIIN++Q+LQRQ LSM+L AVN R++ ++
Sbjct: 180 ALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLD 216
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 3/89 (3%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
+++PPEPPK DYIHVRARRGQ DSH AER RREKISE + +LQDLVP +++ GKA
Sbjct: 8 DTKPPEPPK-DYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADS 66
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRM 214
LDEIINY+QSL+RQ L MKL +N RM
Sbjct: 67 LDEIINYVQSLKRQVELLYMKLATINPRM 95
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
Query: 92 RVNDSDGKRIKTSGSRDD-NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQAT 150
R + S ++K R N +S V+PA++ + P P Y+HVRARRG+AT
Sbjct: 110 RKHSSPAIKVKRESKRQKLNLNSSVSRNAKRVRPAKKQKKVPVEPPTGYVHVRARRGEAT 169
Query: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
DSHSLAER RREKIS RMK+LQ LVPGC+K+ GKALVLDEII+Y+Q L+
Sbjct: 170 DSHSLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQFLK 218
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 60/67 (89%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E KQDYIHVRARRG+ATDSHSLAER RRE+ISERMK L+ LVPGCNK+ GKA +LDEII
Sbjct: 141 EDKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEII 200
Query: 193 NYIQSLQ 199
NY+QSLQ
Sbjct: 201 NYVQSLQ 207
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 61/67 (91%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 195
K DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 196 QSLQRQF 202
QSLQ+Q
Sbjct: 200 QSLQKQV 206
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
+D +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A++LDEIINY+Q
Sbjct: 151 KDVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQ 210
Query: 197 SLQRQ--FLSMKLEAVNT 212
SLQ Q FLSMKL A +T
Sbjct: 211 SLQNQVEFLSMKLTAAST 228
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats.
Identities = 57/65 (87%), Positives = 60/65 (92%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
QDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC KV GKA++LDEIINY+Q
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 197 SLQRQ 201
LQRQ
Sbjct: 61 FLQRQ 65
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 68/82 (82%), Gaps = 3/82 (3%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E PK + +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A++LDEII
Sbjct: 65 EKPK-EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEII 123
Query: 193 NYIQSLQRQ--FLSMKLEAVNT 212
NY+QSLQ Q FLSMKL A +T
Sbjct: 124 NYVQSLQNQVEFLSMKLTAAST 145
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A++LDEIINY+Q
Sbjct: 152 REVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQ 211
Query: 197 SLQRQ--FLSMKLEAVNT 212
SLQ Q FLSMKL A +T
Sbjct: 212 SLQNQVEFLSMKLTAAST 229
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
++ IHVRA+RGQATDSHSLAER RREKI+E+++ LQDLVPGC K +G A++LD IINY+Q
Sbjct: 135 REVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQ 194
Query: 197 SLQRQ--FLSMKLEAVNT 212
SLQ Q FLSMKL A +T
Sbjct: 195 SLQNQIEFLSMKLSAAST 212
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
++ IHVRA+RGQATDSHSLAER RREKI+E+++ LQDLVPGC K +G A++LD IINY+Q
Sbjct: 118 REVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQ 177
Query: 197 SLQRQ--FLSMKLEAVNT 212
SLQ Q FLSMKL A +T
Sbjct: 178 SLQNQIEFLSMKLSAAST 195
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
++ IHVRA+RGQATDSHSLAER RREKI+E+++ LQDLVPGC K +G A++LD IINY+Q
Sbjct: 114 REVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQ 173
Query: 197 SLQRQ--FLSMKLEAVNT 212
SLQ Q FLSMKL A +T
Sbjct: 174 SLQNQIEFLSMKLSAAST 191
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E ++ +HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEII
Sbjct: 140 EEKDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEII 199
Query: 193 NYIQSLQRQ--FLSMKLEAVNT 212
NY+QSLQ Q FLSMKL A ++
Sbjct: 200 NYVQSLQNQVEFLSMKLTAASS 221
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 72/93 (77%), Gaps = 6/93 (6%)
Query: 121 SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
++K E+ + P ++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K
Sbjct: 130 AMKSIEKEDEKP----REVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYK 185
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
+G A++LDEIINY+QSLQ Q FLSMKL A +
Sbjct: 186 TMGMAVMLDEIINYVQSLQNQVEFLSMKLTAAS 218
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 68/76 (89%), Gaps = 2/76 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ-- 201
ARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSLQRQ
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 202 FLSMKLEAVNTRMNPG 217
+LSM+L AVN R++ G
Sbjct: 61 YLSMRLAAVNPRVDFG 76
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 200 RQ--FLSMKLEAVNT 212
Q FLSMKL A ++
Sbjct: 203 NQVEFLSMKLTAASS 217
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
++ +HVRARRGQATDSHSLAER RR KI+ER++ L+D+VPGC K +G A++LDEIINY+Q
Sbjct: 143 REVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQ 202
Query: 197 SLQRQ--FLSMKLEAVNT 212
SLQ Q FLSMKL A ++
Sbjct: 203 SLQNQVEFLSMKLAAASS 220
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
N + PK D +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G A++
Sbjct: 34 NGDETQKPK-DVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVM 92
Query: 188 LDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
LD II+Y++SLQ Q FLSMKL A + + P D Q
Sbjct: 93 LDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 135
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 64/75 (85%), Gaps = 2/75 (2%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+HVRARRGQATDSHSLAER RR KI+E++K LQ++VPGC K +G A++LDEIINY+QSLQ
Sbjct: 150 VHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQ 209
Query: 200 RQ--FLSMKLEAVNT 212
Q FLSMKL A +T
Sbjct: 210 HQVEFLSMKLTAAST 224
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%), Gaps = 2/74 (2%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 201 Q--FLSMKLEAVNT 212
Q FLSMKL A ++
Sbjct: 206 QVEFLSMKLTAASS 219
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%), Gaps = 2/74 (2%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 201 Q--FLSMKLEAVNT 212
Q FLSMKL A ++
Sbjct: 206 QVEFLSMKLTAASS 219
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%), Gaps = 2/74 (2%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 135 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 194
Query: 201 Q--FLSMKLEAVNT 212
Q FLSMKL A ++
Sbjct: 195 QVEFLSMKLTAASS 208
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
+D +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G A++LD II+Y++
Sbjct: 99 KDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVR 158
Query: 197 SLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
SLQ Q FLSMKL A + + P D Q
Sbjct: 159 SLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 192
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
+D +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G A++LD II+Y++
Sbjct: 99 KDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVR 158
Query: 197 SLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
SLQ Q FLSMKL A + + P D Q
Sbjct: 159 SLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 192
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 99/162 (61%), Gaps = 23/162 (14%)
Query: 53 DPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHH 112
+P NL HG+ K+R +E+ A +SSGN ++ +G N++
Sbjct: 85 EPKNLFGNDLHGS---KKRKLENNDA--YESSSGNST---------PQVSENGINTKNNN 130
Query: 113 SKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 172
K E S K + + P ++ +HVRARRGQATDSHS+AER RR KI+ER++ LQ
Sbjct: 131 GK---EKRSKKGDTNDGEKP----REVVHVRARRGQATDSHSVAERIRRGKINERLRCLQ 183
Query: 173 DLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
D+VPGC K +G A++LDEIINY+QSLQ Q FLSMKL A ++
Sbjct: 184 DIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASS 225
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 95/176 (53%), Gaps = 28/176 (15%)
Query: 40 LSQFGTNREVSGDDPVNLEHKMAHGNGVRKRRDV-EDESAKHVSTSSGNGNGNRVNDSDG 98
L Q + EV P+ H RK D+ E SA S +G+ + + G
Sbjct: 55 LVQCVDHNEVPVLVPIGSVKNEIHEGQKRKATDICEPSSANSTPAVSESGSKTKNSSGRG 114
Query: 99 KRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAER 158
KR+K + D KP E +HVRA+RGQATDSHSLAER
Sbjct: 115 KRVKRNSIEDK-------------KPNE------------VVHVRAKRGQATDSHSLAER 149
Query: 159 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
RR KI+E+++ LQ++VPGC K +G A++LDEIINY+QSLQ Q FLSMKL A +T
Sbjct: 150 VRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAAST 205
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1085
Query: 200 RQ--FLSMKLEAVNT 212
Q FLSMKL A ++
Sbjct: 1086 NQVEFLSMKLNAASS 1100
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 95/150 (63%), Gaps = 30/150 (20%)
Query: 68 RKRRDVE-DESAKHVSTSSGNGNGNRVNDSDG--KRIKTSGSRDDNHHSKAEAEPSSVKP 124
+KR+ V+ E++ ST + + +G+++ S G KR+K++ + ++
Sbjct: 104 KKRKSVDLPETSSANSTPAVSESGSKIKHSSGRGKRVKSNVTEEEK-------------- 149
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
++ +HVRARRGQATDSHSLAER RR KI+E+++ LQ++VPGC K +G
Sbjct: 150 -----------AKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGM 198
Query: 185 ALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
A++LDEIINY+QSLQ Q FLS+KL A +T
Sbjct: 199 AVMLDEIINYVQSLQHQVEFLSLKLTAAST 228
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1096
Query: 200 RQ--FLSMKLEAVNT 212
Q FLSMKL A ++
Sbjct: 1097 NQVEFLSMKLTAASS 1111
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 95/154 (61%), Gaps = 30/154 (19%)
Query: 63 HGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDG--KRIKTSGSRDDNHHSKAEAEPS 120
H RK D+ + S+ + ST + + +G+++ S G KR+K++ + ++
Sbjct: 100 HEGKKRKSMDLPETSSAN-STPAVSESGSKIKHSSGRGKRVKSNVTEEEK---------- 148
Query: 121 SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
++ +HVRARRGQATDSHSLAER RR KI+E+++ LQ++VPGC K
Sbjct: 149 ---------------AKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYK 193
Query: 181 VIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNT 212
+G A++LDEIINY+QSLQ Q FLS+KL A +T
Sbjct: 194 TMGMAVMLDEIINYVQSLQHQVEFLSLKLTAAST 227
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 127 QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
Q PP Y+HVRARRG+ATDSHSLAER RRE+IS +MK+LQ LVPGC+++ GKAL
Sbjct: 62 QKKAPPLEHPTGYVHVRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKAL 121
Query: 187 VLDEIINYIQSLQRQFLSMKLEAV 210
+LDEII Y+QSL+ + S++ E V
Sbjct: 122 ILDEIIRYVQSLKDRIGSLEAELV 145
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 106/190 (55%), Gaps = 32/190 (16%)
Query: 29 LGQKGAHFGQHLSQ-FGTNREVSGDDPV-NLEHKMAHGNGVRKRRDVEDESAKHVSTSSG 86
LG A F +L + F + EV P+ N H RK D+ + S+ + ST +
Sbjct: 36 LGSPEAEFAGNLEENFPDHNEVPVLVPIINSVKNEIHEGQKRKATDIWEPSSAN-STPAV 94
Query: 87 NGNGNRVNDSDG--KRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRA 144
+G++ +S G KR+K + D KP E +HVRA
Sbjct: 95 FESGSKTKNSCGRGKRVKRNMIEDK-------------KPNE------------VVHVRA 129
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--F 202
+RGQATDSHSLAER RR KI+E+++ LQ++VPGC K +G A++LDEIINY+QSLQ Q F
Sbjct: 130 KRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEF 189
Query: 203 LSMKLEAVNT 212
LSMKL A +T
Sbjct: 190 LSMKLNAAST 199
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 8/111 (7%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
IHVRA+RGQATDSHS+AER RREKI+ +++ LQDLVPGC+K +G A++L+EIINY+ SLQ
Sbjct: 147 IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQ 206
Query: 200 RQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSR 248
Q FLSM+L A + + +E K Q +AG +Q T+++ R
Sbjct: 207 NQVEFLSMELAAASCSYDLNLETESSKK--AQVTSSAG----TQETQKWLR 251
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
Query: 200 RQ--FLSMKLEAVNT 212
Q LSMKL A ++
Sbjct: 206 NQVELLSMKLTAASS 220
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 63/74 (85%), Gaps = 2/74 (2%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
HVRARRGQATDSHSLAER RR KI+E+++ LQ++VPGC K +G A++LDEIINY+QSLQ
Sbjct: 156 HVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQH 215
Query: 201 Q--FLSMKLEAVNT 212
Q FLS+KL A +T
Sbjct: 216 QVEFLSLKLTAAST 229
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 62/95 (65%), Gaps = 29/95 (30%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN----------------- 179
+DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTH 332
Query: 180 ------------KVIGKALVLDEIINYIQSLQRQF 202
KV GKA++LDEIINY+QSLQ Q
Sbjct: 333 AYFNFQRLLDLVKVTGKAVMLDEIINYVQSLQCQV 367
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
++ IHVRA+RGQATDSHS+AER RREKI+ +++ LQDLVPGC++ +G A++L+EIINY+
Sbjct: 143 EEVIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVH 202
Query: 197 SLQRQ--FLSMKLEAVNT 212
SLQ Q FLSM+L A ++
Sbjct: 203 SLQNQVEFLSMELAAASS 220
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E KQD+I VRARRGQATDS S+AE R EKI +RMK LQDLVPGC KV GK +LDEII
Sbjct: 2 EYSKQDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEII 61
Query: 193 NYIQSLQRQF--LSMKLEAVN 211
NY+QSLQ Q LSMKL AV+
Sbjct: 62 NYVQSLQCQAESLSMKLGAVH 82
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Query: 137 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 196
++ IHVRA+RGQATDSHS+AER RREKI+ +++ LQD+VPGC+K +G A++L+EIINY+
Sbjct: 153 KEVIHVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVH 212
Query: 197 SLQRQ--FLSMKLEAVNT 212
SLQ Q FLSM+L A +
Sbjct: 213 SLQNQVEFLSMELAAASC 230
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/60 (88%), Positives = 56/60 (93%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATDSHSLAER RREKISERMK LQDLVPGC KV GKA++LDEIINY+QSLQRQ
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 72/129 (55%), Gaps = 49/129 (37%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK--------------- 180
K Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFG 257
Query: 181 --------------------------------VIGKALVLDEIINYIQSLQRQ--FLSMK 206
+ G ALVLDEIIN++QSLQRQ LSM+
Sbjct: 258 VHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMR 317
Query: 207 LEAVNTRMN 215
L AVN R++
Sbjct: 318 LAAVNPRID 326
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E P Y+HVRARRG+ATD HSLAER RR+KIS RMK+LQ LVPGC+K+ GKA +LDEII
Sbjct: 155 EHPLTGYVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEII 214
Query: 193 NYIQSLQRQ--FLSMKLEAVN 211
++ SLQ Q FL+ K + N
Sbjct: 215 RHVLSLQNQVEFLAAKFTSEN 235
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E PK + IHVRA+RGQATDSHSLAER RRE+I+E+++ LQDLVPGC K +G A++LD II
Sbjct: 113 EKPK-EVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVII 171
Query: 193 NYIQSLQRQF 202
NY+QSLQ Q
Sbjct: 172 NYVQSLQNQI 181
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 138 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 197
+ IHVRARRGQATD+HS+AER RREKI R++ LQDLVPGC K G A++LDEIINY+ S
Sbjct: 198 EVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINYVHS 257
Query: 198 LQRQ--FLSMKLEAVNTRMN 215
LQ Q FLS +L A ++ N
Sbjct: 258 LQNQVEFLSRELAAASSLHN 277
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 89/155 (57%), Gaps = 31/155 (20%)
Query: 58 EHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEA 117
E+K+ H RK D ++ TSSGN V++S G + K SG R
Sbjct: 95 ENKVHHEGKKRKMMDFQE-------TSSGNSTP-AVSES-GSKTKLSGGRG--------- 136
Query: 118 EPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 177
VK E E ++ +HVRARRGQATDSHSLAER RR KI+E++K LQ++VPG
Sbjct: 137 --KRVKSYE----TEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPG 190
Query: 178 CNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNT 212
C K +G A++LDEIINY FLS+KL A +T
Sbjct: 191 CYKTMGMAVMLDEIINY-------FLSLKLTAAST 218
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 7/85 (8%)
Query: 138 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI-----GKALVLDEII 192
+ IHVRARRGQATD+HS+AER RREKI R++ LQDLVPGC KV G A++LDEII
Sbjct: 144 EVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLDEII 203
Query: 193 NYIQSLQRQ--FLSMKLEAVNTRMN 215
NY+ SLQ Q FLS +L A ++ N
Sbjct: 204 NYVHSLQNQVEFLSRELAAASSLHN 228
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 64/100 (64%), Gaps = 20/100 (20%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
PEP K DYIHVR RE+ISERMK+LQ LVPGCNK+ GKAL+LDEI
Sbjct: 195 PEPAK-DYIHVR-----------------RERISERMKLLQSLVPGCNKITGKALMLDEI 236
Query: 192 INYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQQ 229
INY+QSLQRQ FLSMKL +N +++ P KD +
Sbjct: 237 INYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSHM 276
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
Query: 127 QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
+N+ E ++ ++VRAR GQATDS +LAER RR KI+E+++ LQ++VPGC K +G A+
Sbjct: 138 KNNVTEEEKAKEVVNVRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAV 197
Query: 187 VLDEIINYIQSLQRQ--FLSMKLEAVNT 212
+LDEIINY+QSLQ Q FLS+KL A +T
Sbjct: 198 MLDEIINYVQSLQNQVEFLSLKLTAPST 225
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
+++VRARRG+A DSHSLAER RR+KIS +MK+LQ LVPGC+K GK +LD IINYI SL
Sbjct: 133 FVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSL 192
Query: 199 QRQFLSMKLEAVNTRMNPGIEV 220
Q Q S+ E ++P +V
Sbjct: 193 QDQVKSLMEEL--ALVDPTFDV 212
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 64/83 (77%), Gaps = 4/83 (4%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ- 201
RARRGQATDSH+LAER RR KI+E+++ LQ++VPGC K + A++LDEIINY+QSLQ Q
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 202 -FLSMKLEAVNTR--MNPGIEVF 221
FLS++L A +T N I+ F
Sbjct: 212 EFLSLELTAASTFYDFNSEIDAF 234
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 68/105 (64%), Gaps = 13/105 (12%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAER--------ARREKISERMKILQDLVPGCN--KVI 182
EPPK DYIHVRARRGQATDSHSLAER A + + D + +V
Sbjct: 266 EPPK-DYIHVRARRGQATDSHSLAERVNTAGVYAAIHNFVFSSILAFADAIAAVFHLQVT 324
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
GKA++LDEIINY+QSLQRQ FLSMKL VN +++ ++ F PKD
Sbjct: 325 GKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKD 369
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 62/88 (70%), Gaps = 15/88 (17%)
Query: 106 SRDDNHHSKAEAEPSSV------------KPAEQNSQPPEPPKQDYIHVRARRGQATDSH 153
S +++ HSK + E SS+ K A + S E K+DYIHVRARRGQAT+SH
Sbjct: 208 SANESVHSKDKGEESSLATTTTGPGKSKGKGARETS---ESQKEDYIHVRARRGQATNSH 264
Query: 154 SLAERARREKISERMKILQDLVPGCNKV 181
SLAER RREKISERMK+LQDLVPGC+KV
Sbjct: 265 SLAERLRREKISERMKLLQDLVPGCSKV 292
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 64/106 (60%), Gaps = 24/106 (22%)
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
K A+ NS E PK++YIHVRARRGQAT+SHSLAER +
Sbjct: 246 KHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAER----------------------IT 283
Query: 183 GKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDF 226
GKA++LDEIINY+QSLQ+Q FLSMKL VN +N IE KD
Sbjct: 284 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERLLSKDI 329
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 74/120 (61%), Gaps = 7/120 (5%)
Query: 63 HGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV 122
H GV+KR+ D A ++S G++ + + S RD+ + S
Sbjct: 66 HSGGVKKRKGTNDCIALLNPSASSKNVGDQQTEVSSQPESNSMERDNR-------KISPK 118
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
++++S + K++Y+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGCNKV
Sbjct: 119 TQSKEDSSDGDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKVT 178
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 65/105 (61%), Gaps = 24/105 (22%)
Query: 126 EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
+++SQ E PK++YIH+RARRGQAT+SHSLAER + GKA
Sbjct: 190 KESSQSEEAPKENYIHMRARRGQATNSHSLAER----------------------ITGKA 227
Query: 186 LVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKDFTQ 228
++LDEIINY+QSLQ+Q FLSMKL VN +N I+ KD Q
Sbjct: 228 VMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQ 272
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 69/116 (59%), Gaps = 14/116 (12%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 194
Query: 202 --FLSM-KLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFV--SQATREYSRGTSP 252
LSM +L M P + P + AG V SQ R+ S SP
Sbjct: 195 VKVLSMSRLGGAGATMAPLVADLP--------LEGAGQELVSSSQLCRQISVNLSP 242
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 60/97 (61%), Gaps = 24/97 (24%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
+ +SQ E PK+DYIHVRA+RGQAT+SHSLAER + GK
Sbjct: 229 VKMSSQTGEAPKEDYIHVRAKRGQATNSHSLAER----------------------ITGK 266
Query: 185 ALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
A++LDEIINY+QSLQRQ FLSMKL V MN IE
Sbjct: 267 AVMLDEIINYVQSLQRQVEFLSMKLATVYPEMNVQIE 303
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 5/72 (6%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI-----GKALVLD 189
P Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NKVI KA +LD
Sbjct: 278 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLD 337
Query: 190 EIINYIQSLQRQ 201
EII+Y++ LQ Q
Sbjct: 338 EIIDYVKFLQLQ 349
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 308
Query: 202 FLSM 205
LSM
Sbjct: 309 VLSM 312
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
NH S E + +S N++P RARRGQATD HS+AER RREKISERMK
Sbjct: 292 NHSSDVEPQANSAPGNSANAKP---------RTRARRGQATDPHSIAERLRREKISERMK 342
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
LQDLVP NK KA +LDEII+Y++ LQ Q LSM
Sbjct: 343 NLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 379
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 51/61 (83%)
Query: 121 SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
S++ A++ + ++DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK
Sbjct: 133 SMECADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNK 192
Query: 181 V 181
Sbjct: 193 A 193
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 4/76 (5%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
P+PP Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP CNK +A +LDEI
Sbjct: 49 PQPP-QVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEI 106
Query: 192 INYIQ--SLQRQFLSM 205
++Y++ LQ + LSM
Sbjct: 107 VDYVKFLRLQVKVLSM 122
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 4/72 (5%)
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
PP+Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LV NK KA +LDEII+
Sbjct: 140 PPRQ---RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKT-DKASMLDEIID 195
Query: 194 YIQSLQRQFLSM 205
Y++ LQ Q LSM
Sbjct: 196 YVKFLQLQVLSM 207
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 4/72 (5%)
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
PP+Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LV NK KA +LDEII+
Sbjct: 112 PPRQ---RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKT-DKASMLDEIID 167
Query: 194 YIQSLQRQFLSM 205
Y++ LQ Q LSM
Sbjct: 168 YVKFLQLQVLSM 179
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 57/89 (64%), Gaps = 11/89 (12%)
Query: 157 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRM 214
ER RRE+I ERMK LQ LVPGCNK+ GKA +L+EIINY+QSLQRQ FLSMKL V
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGV---- 58
Query: 215 NPGIEVFPPKDFTQQ-----TFDTAGMPF 238
NP I + + QQ F T + F
Sbjct: 59 NPEIRSYQHGNLIQQGGTNKLFCTISIKF 87
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 4/76 (5%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
P+PP Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP CNK +A +LDEI
Sbjct: 148 PQPP-QVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEI 205
Query: 192 INYIQ--SLQRQFLSM 205
++Y++ LQ + LSM
Sbjct: 206 VDYVKFLRLQVKVLSM 221
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 5/74 (6%)
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
PP+Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+
Sbjct: 177 PPRQ--TRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIID 233
Query: 194 YIQSLQRQ--FLSM 205
Y++ LQ Q LSM
Sbjct: 234 YVKFLQLQVKVLSM 247
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 57/80 (71%), Gaps = 6/80 (7%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
N P P+Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 26 NGGAPAQPRQ---RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASM 81
Query: 188 LDEIINYIQSLQRQ--FLSM 205
LDEII+Y++ LQ Q LSM
Sbjct: 82 LDEIIDYVKFLQLQVKVLSM 101
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 195 IQSLQRQ--FLSM 205
++ LQ Q LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 119 PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
P++ A + P PKQ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 226 PAASGSAGGGTTPAAQPKQQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 283
Query: 179 NKVIGKALVLDEIINYIQSLQRQ--FLSM 205
NK KA +LDEII+Y++ LQ Q LSM
Sbjct: 284 NKT-DKASMLDEIIDYVKFLQLQVKVLSM 311
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 202 --FLSM 205
LSM
Sbjct: 379 VKVLSM 384
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P Q +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 195 IQSLQRQ--FLSM 205
++ LQ Q LSM
Sbjct: 190 VEFLQLQVKVLSM 202
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P Q +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 195 IQSLQRQ--FLSM 205
++ LQ Q LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 5/74 (6%)
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
PP+Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+
Sbjct: 198 PPRQQ--RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIID 254
Query: 194 YIQSLQRQ--FLSM 205
Y++ LQ Q LSM
Sbjct: 255 YVKFLQLQVKVLSM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 5/74 (6%)
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
PP+Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+
Sbjct: 198 PPRQQ--RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIID 254
Query: 194 YIQSLQRQ--FLSM 205
Y++ LQ Q LSM
Sbjct: 255 YVKFLQLQVKVLSM 268
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P Q +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 195 IQSLQRQ--FLSM 205
++ LQ Q LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 202 --FLSM 205
LSM
Sbjct: 379 VKVLSM 384
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 210 PGQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 268
Query: 195 IQSLQRQF 202
++ LQ Q
Sbjct: 269 VKFLQLQV 276
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 189 PAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 247
Query: 195 IQSLQRQ--FLSM 205
++ LQ Q LSM
Sbjct: 248 VKFLQVQVKVLSM 260
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 375
Query: 202 --FLSM 205
LSM
Sbjct: 376 VKVLSM 381
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 202 --FLSM 205
LSM
Sbjct: 379 VKVLSM 384
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 6/76 (7%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
P P+Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEI
Sbjct: 97 PAQPRQ---RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEI 152
Query: 192 INYIQSLQRQ--FLSM 205
I+Y++ LQ Q LSM
Sbjct: 153 IDYVKFLQLQVKVLSM 168
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 249 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 307
Query: 195 IQSLQRQ--FLSM 205
++ LQ Q LSM
Sbjct: 308 VKFLQLQVKVLSM 320
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 192 PAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 250
Query: 195 IQSLQRQ--FLSM 205
++ LQ Q LSM
Sbjct: 251 VKFLQVQVKVLSM 263
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Query: 135 PKQDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
P Q IH VRARRGQATD HS+AER RRE+ISER+K LQ+LVP CNK ALV DEI+
Sbjct: 125 PHQPAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDRAALV-DEIL 183
Query: 193 NYIQ--SLQRQFLSM 205
+Y++ LQ + LSM
Sbjct: 184 DYVKFLRLQVKVLSM 198
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 340
Query: 202 --FLSM 205
LSM
Sbjct: 341 VKVLSM 346
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 6/73 (8%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
PKQ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 193 PKQ---RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 248
Query: 195 IQSLQRQ--FLSM 205
++ LQ Q LSM
Sbjct: 249 VKFLQLQVKVLSM 261
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 6/74 (8%)
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
PP+Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEI++
Sbjct: 235 PPRQ---RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIVD 290
Query: 194 YIQSLQRQ--FLSM 205
Y++ LQ Q LSM
Sbjct: 291 YVKFLQLQVKVLSM 304
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 6/74 (8%)
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
PP+Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEI++
Sbjct: 234 PPRQ---RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIVD 289
Query: 194 YIQSLQRQ--FLSM 205
Y++ LQ Q LSM
Sbjct: 290 YVKFLQLQVKVLSM 303
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 44/49 (89%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
E K Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+KV
Sbjct: 176 ESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 283
Query: 202 --FLSM 205
LSM
Sbjct: 284 VKVLSM 289
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 6/73 (8%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
PKQ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 200 PKQK---VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 255
Query: 195 IQSLQRQ--FLSM 205
++ LQ Q LSM
Sbjct: 256 VKFLQLQVKVLSM 268
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 232
Query: 202 --FLSM 205
LSM
Sbjct: 233 VKVLSM 238
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 12/98 (12%)
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
NH S E + +S N++P RARRGQATD HS+AER RREKISERMK
Sbjct: 293 NHSSDVEPQANSAPGNSANAKP---------RTRARRGQATDPHSIAERLRREKISERMK 343
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
LQ LVP NK KA +LDEII+Y++ LQ Q LSM
Sbjct: 344 NLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 12/98 (12%)
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
NH S E + +S N++P RARRGQATD HS+AER RREKISERMK
Sbjct: 293 NHSSDVEPQANSAPGNSANAKP---------RTRARRGQATDPHSIAERLRREKISERMK 343
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
LQ LVP NK KA +LDEII+Y++ LQ Q LSM
Sbjct: 344 NLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 311
Query: 202 --FLSM 205
LSM
Sbjct: 312 VKVLSM 317
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 12/98 (12%)
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
NH S E + +S N++P RARRGQATD HS+AER RREKISERMK
Sbjct: 293 NHSSDVEPQANSAPGNSANAKP---------RTRARRGQATDPHSIAERLRREKISERMK 343
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
LQ LVP NK KA +LDEII+Y++ LQ Q LSM
Sbjct: 344 NLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RARRGQATD HS+AER RREKISERMK LQDLVP NK K+ +LDEII+Y++ LQ Q
Sbjct: 320 ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKA-DKSSMLDEIIDYVKFLQLQ 378
Query: 202 --FLSM 205
LSM
Sbjct: 379 VKVLSM 384
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DKASMLDEIIDYVKFLQVQ 202
Query: 202 --FLSMKLEAVNTRMNPGIEVFPPKD 225
LSM + P + P+D
Sbjct: 203 VKVLSMSRLGGAGAVAPLVANMSPED 228
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 8/79 (10%)
Query: 129 SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
+QP PK VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +L
Sbjct: 179 AQPQTKPK-----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASML 232
Query: 189 DEIINYIQSLQRQ--FLSM 205
DEII+Y++ LQ Q LSM
Sbjct: 233 DEIIDYVKFLQLQVKVLSM 251
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%), Gaps = 5/74 (6%)
Query: 143 RARRGQATDSHSLAE---RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+ R+ + D+ SL + RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ
Sbjct: 59 KKRKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQ 118
Query: 200 RQ--FLSMKLEAVN 211
Q FLSM++ +++
Sbjct: 119 NQVEFLSMRIASLS 132
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 12/98 (12%)
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
NH S E + +S N++P RARRGQATD HS+AER RREKISERMK
Sbjct: 216 NHSSDVEPQANSAPGNSANAKP---------RTRARRGQATDPHSIAERLRREKISERMK 266
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
LQ LVP NK KA +LDEII+Y++ LQ Q LSM
Sbjct: 267 NLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 303
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKT-DKASMLDEIIDYVKFLQL 89
Query: 201 Q--FLSM 205
Q LSM
Sbjct: 90 QVKVLSM 96
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 57/80 (71%), Gaps = 8/80 (10%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
+QP PK VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 121 TAQPQTKPK-----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASM 174
Query: 188 LDEIINYIQSLQRQ--FLSM 205
LDEII+Y++ LQ Q LSM
Sbjct: 175 LDEIIDYVKFLQLQVKVLSM 194
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKT-DKASMLDEIIDYVKFLQL 88
Query: 201 Q--FLSM 205
Q LSM
Sbjct: 89 QVKVLSM 95
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 57/80 (71%), Gaps = 8/80 (10%)
Query: 128 NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
+QP PK VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 121 TAQPQTKPK-----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASM 174
Query: 188 LDEIINYIQSLQRQ--FLSM 205
LDEII+Y++ LQ Q LSM
Sbjct: 175 LDEIIDYVKFLQLQVKVLSM 194
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RARRGQATD HS+AER RREKISERMK LQDLVP NK K+ +LDEII+Y++ LQ Q
Sbjct: 319 ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKA-DKSSMLDEIIDYVKFLQLQ 377
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+ISER+K LQ+LVP CNK +A +LDEI++Y++ LQ
Sbjct: 141 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT-DRAAMLDEILDYVKFLRLQ 199
Query: 200 RQFLSM 205
+ LSM
Sbjct: 200 VKVLSM 205
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+ISER+K LQ+LVP CNK +A +LDEI++Y++ LQ
Sbjct: 142 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT-DRAAMLDEILDYVKFLRLQ 200
Query: 200 RQFLSM 205
+ LSM
Sbjct: 201 VKVLSM 206
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI--GKALVLDEIINYIQSLQ 199
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK++ KA +LDEII+Y++ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 200 RQF 202
Q
Sbjct: 310 LQV 312
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
VRARRGQATD HS+AER RRE+I+ERMK LQDLVP NK KA +LDEI++Y++ LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANKT-DKASMLDEIVDYVKFLQL 61
Query: 201 Q--FLSM 205
Q LSM
Sbjct: 62 QVKVLSM 68
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P Q VRARRGQAT HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 253 PAQPRQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDY 311
Query: 195 IQSLQRQ--FLSM 205
++ LQ Q LSM
Sbjct: 312 VKFLQLQVKVLSM 324
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGI-EVFPPK 224
MK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN R+ G + F P+
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELGADDSFVPR 60
Query: 225 D-------FTQQTFDTAGMPFVSQATREYSRGTSPDWLH 256
D + A P A G+SP + +
Sbjct: 61 DDANKMCAAATSSISMAQQPLPLPAAYHALEGSSPAFCY 99
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 136 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
K Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDK 242
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQ 372
Query: 202 --FLSM 205
LSM
Sbjct: 373 VKVLSM 378
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 54/77 (70%), Gaps = 11/77 (14%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGI------E 219
MK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQ FLSMKL AVN R++ I E
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 60
Query: 220 VFPPKDFTQQTFDTAGM 236
VFP Q+F + GM
Sbjct: 61 VFPA---CAQSFPSIGM 74
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 8/78 (10%)
Query: 130 QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
QP PK VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LD
Sbjct: 121 QPQTKPK-----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLD 174
Query: 190 EIINYIQSLQRQ--FLSM 205
EII+Y++ LQ Q LSM
Sbjct: 175 EIIDYVKFLQLQVKVLSM 192
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQ 372
Query: 202 --FLSM 205
LSM
Sbjct: 373 VKVLSM 378
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII++++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDHVKFLQLQ 378
Query: 202 --FLSM 205
LSM
Sbjct: 379 VKVLSM 384
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 298
Query: 203 LSM 205
LSM
Sbjct: 299 LSM 301
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 217
Query: 202 F 202
Sbjct: 218 V 218
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN-PGIEVFPPK 224
MK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+Q FLSMKL VN +++ + K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 225 DFTQ-------QTF----DTAGMPFVSQATREYSRGT 250
D Q F D A PF QA +S G+
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGS 97
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
Query: 108 DDNHHSKAEAEPS-----SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARRE 162
D HH + P+ ++P S P + VRARRGQATD HS+AER RRE
Sbjct: 60 DQFHHPQESGGPTMGSQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRE 119
Query: 163 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q LSM
Sbjct: 120 RIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQVKVLSM 163
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN-PGIEVFPPK 224
MK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+Q FLSMKL VN +++ + K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 225 DFTQ-------QTF----DTAGMPFVSQATREYSRGT 250
D Q F D A PF QA +S G+
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGS 97
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 9/79 (11%)
Query: 130 QPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
QPP P PK VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A++L
Sbjct: 114 QPPAPRPK-----VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAVML 167
Query: 189 DEIINYIQ--SLQRQFLSM 205
DEI++Y++ LQ + LSM
Sbjct: 168 DEILDYVKFLRLQVKVLSM 186
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
MK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ FLSMKL VN R++ IE KD
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKD 60
Query: 226 FTQ 228
Q
Sbjct: 61 ILQ 63
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMN-PGIEVFPPK 224
MK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+Q FLSMKL VN +++ + K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 225 DFTQ-------QTF----DTAGMPFVSQATREYSRGT 250
D Q F D A PF QA +S G+
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGS 97
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 296 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIEYVKFLQLQ 354
Query: 202 --FLSM 205
LSM
Sbjct: 355 VKVLSM 360
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 7/80 (8%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQ 157
Query: 202 FLSMKLE------AVNTRMN 215
+ + AV R+N
Sbjct: 158 VKVLSMSRLGGAGAVGPRLN 177
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 30 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIGYVKFLQLQ 88
Query: 202 --FLSM 205
LSM
Sbjct: 89 VKVLSM 94
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 149 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIEYVKFLQLQ 207
Query: 202 --FLSM 205
LSM
Sbjct: 208 VKVLSM 213
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ- 201
RARRGQATD HS+AER RREKISERMK LQ+LVP NK K+ +LDEII+Y++ LQ Q
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKA-DKSSMLDEIIDYVKFLQLQV 380
Query: 202 -FLSM 205
LSM
Sbjct: 381 KVLSM 385
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 9/82 (10%)
Query: 127 QNSQPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
Q QPP P PKQ RARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A
Sbjct: 115 QPHQPPAPRPKQ-----RARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRA 168
Query: 186 LVLDEIINYIQ--SLQRQFLSM 205
+LDEI++Y++ LQ + LSM
Sbjct: 169 AMLDEILDYVKFLRLQVKVLSM 190
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRG ATD HS+AER RREKI+ERMK LQ+LVP NKV KA +LDEII Y++ LQ Q
Sbjct: 240 VRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKV-DKASMLDEIIEYVKFLQLQ 298
Query: 202 --FLSM 205
LSM
Sbjct: 299 VKVLSM 304
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI--GKALVLDEIINYIQSLQ 199
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK + KA +LDEII+Y++ LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 200 RQF 202
Q
Sbjct: 298 LQV 300
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP +KV KA +LDEII Y++ LQ Q
Sbjct: 351 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKV-DKASMLDEIIEYVKFLQLQ 409
Query: 202 --FLSM 205
LSM
Sbjct: 410 VKVLSM 415
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 9/84 (10%)
Query: 125 AEQNSQPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 183
A QPP P PK VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK
Sbjct: 111 AAVGPQPPAPRPK-----VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-D 164
Query: 184 KALVLDEIINYIQ--SLQRQFLSM 205
+A +LDEI++Y++ LQ + LSM
Sbjct: 165 RAAMLDEILDYVKFLRLQVKVLSM 188
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 9/79 (11%)
Query: 130 QPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
QPP P PK VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +L
Sbjct: 125 QPPAPRPK-----VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAML 178
Query: 189 DEIINYIQ--SLQRQFLSM 205
DEI++Y++ LQ + LSM
Sbjct: 179 DEILDYVKFLRLQVKVLSM 197
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Query: 123 KPAE--QNSQPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
KP E QPP P PK VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP N
Sbjct: 7 KPGEGGMAPQPPAPRPK-----VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTN 61
Query: 180 KVIGKALVLDEIINYIQ--SLQRQFLSM 205
K +A +LDEI++Y++ LQ + LSM
Sbjct: 62 KT-DRAAMLDEILDYVKFLRLQVKVLSM 88
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 9/79 (11%)
Query: 130 QPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
QPP P PK VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +L
Sbjct: 125 QPPAPRPK-----VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAML 178
Query: 189 DEIINYIQ--SLQRQFLSM 205
DEI++Y++ LQ + LSM
Sbjct: 179 DEILDYVKFLRLQVKVLSM 197
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Query: 123 KPAE--QNSQPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
KP E QPP P PK VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP N
Sbjct: 99 KPGEGGMAPQPPAPRPK-----VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTN 153
Query: 180 KVIGKALVLDEIINYIQ--SLQRQFLSM 205
K +A +LDEI++Y++ LQ + LSM
Sbjct: 154 KT-DRAAMLDEILDYVKFLRLQVKVLSM 180
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 47/81 (58%), Gaps = 33/81 (40%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAER--------------------------------AR 160
EPPK DYIHVRARRGQATDSHSLAER R
Sbjct: 270 EPPK-DYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVR 328
Query: 161 REKISERMKILQDLVPGCNKV 181
REKISERMK+LQDLVPGCNKV
Sbjct: 329 REKISERMKLLQDLVPGCNKV 349
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Query: 123 KPAE--QNSQPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
KP E QPP P PK VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP N
Sbjct: 98 KPGEGGMAPQPPAPRPK-----VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTN 152
Query: 180 KVIGKALVLDEIINYIQ--SLQRQFLSM 205
K +A +LDEI++Y++ LQ + LSM
Sbjct: 153 KT-DRAAMLDEILDYVKFLRLQVKVLSM 179
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Query: 118 EPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 177
+P+S A Q P P+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 150 QPTSSAVAAQPHPPAIRPR-----VRARRGQATDPHSIAERLRRERIAERMKALQELVPS 204
Query: 178 CNKVIGKALVLDEIINYIQ--SLQRQFLSM 205
NK +A +LDEI++Y++ LQ + LSM
Sbjct: 205 ANKT-DRAAMLDEIVDYVKFLRLQVKVLSM 233
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 57/79 (72%), Gaps = 7/79 (8%)
Query: 130 QPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
QPP P PK VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +L
Sbjct: 125 QPPAPRPK-----VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAML 178
Query: 189 DEIINYIQSLQRQFLSMKL 207
DEI++Y++ L+ Q + +
Sbjct: 179 DEILDYVKFLRLQVKVLSI 197
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Query: 118 EPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 177
+P+S A Q P P+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 80 QPTSSAVAAQPHPPAIRPR-----VRARRGQATDPHSIAERLRRERIAERMKALQELVPS 134
Query: 178 CNKVIGKALVLDEIINYIQ--SLQRQFLSM 205
NK +A +LDEI++Y++ LQ + LSM
Sbjct: 135 ANKT-DRAAMLDEIVDYVKFLRLQVKVLSM 163
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP N+ KA +LDEII Y++ LQ Q
Sbjct: 298 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRT-DKASMLDEIIEYVKFLQLQ 356
Query: 202 --FLSM 205
LSM
Sbjct: 357 VKVLSM 362
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ- 201
RA+RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 254
Query: 202 -FLSMKLEAVNTRMNP 216
LSM T + P
Sbjct: 255 KVLSMSRLGGATAVGP 270
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
Query: 129 SQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
S P+PP VRARRGQATD HS+AER RR +I+ER+K LQ+LVP CNK +A +L
Sbjct: 4 SAVPQPPGIRP-RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKT-DRAAML 61
Query: 189 DEIINYIQSLQRQF--LSM 205
DEI++Y++ L+ Q LSM
Sbjct: 62 DEIVDYVKFLRLQIKVLSM 80
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ERM+ LQDLVP NK +A +LDEI++Y++ LQ
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKT-DRAAMLDEILDYVKFLRLQ 239
Query: 200 RQFLSM 205
+ LSM
Sbjct: 240 VKVLSM 245
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
P+PP VRARRGQATD HS+AER RR +I+ER+K LQ+LVP CNK +A +LDEI
Sbjct: 11 PQPPGIRP-RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKT-DRAAMLDEI 68
Query: 192 INYIQ--SLQRQFLSM 205
++Y++ LQ + LSM
Sbjct: 69 VDYVKFLRLQVKVLSM 84
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +L+EII YI+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNKT-DKASMLEEIIEYIKFLQLQ 340
Query: 202 --FLSM 205
LSM
Sbjct: 341 TKVLSM 346
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A +LDEI++Y++ LQ
Sbjct: 151 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKT-DRAAMLDEIVDYVKFLRLQ 209
Query: 200 RQFLSM 205
+ LSM
Sbjct: 210 VKVLSM 215
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ERM+ LQDLVP NK +A +LDEI++Y++ LQ
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKT-DRAAMLDEILDYVKFLRLQ 190
Query: 200 RQFLSM 205
+ LSM
Sbjct: 191 VKVLSM 196
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIEVFPPKD 225
MK+LQ LVPGCNK+ GKAL+LDEIINY+QSLQRQ FLSMKL +N +++ P KD
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKD 60
Query: 226 FT 227
+
Sbjct: 61 MS 62
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A +LDEI++Y++ LQ
Sbjct: 175 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKT-DRAAMLDEIVDYVKFLRLQ 233
Query: 200 RQFLSM 205
+ LSM
Sbjct: 234 VKVLSM 239
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ- 201
RA+RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 247
Query: 202 -FLSM 205
LSM
Sbjct: 248 KVLSM 252
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP N+ KA +LDEII Y++ LQ Q
Sbjct: 298 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRT-DKASMLDEIIEYVKFLQLQ 356
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ- 201
RA+RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVRFLQLQV 253
Query: 202 -FLSM 205
LSM
Sbjct: 254 KVLSM 258
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A +LDEI++Y++ LQ
Sbjct: 166 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKT-DRAAMLDEIVDYVKFLRLQ 224
Query: 200 RQFLSM 205
+ LSM
Sbjct: 225 VKVLSM 230
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A +LDEI++Y++ LQ
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKT-DRAAMLDEIVDYVKFLRLQ 227
Query: 200 RQFLSM 205
+ LSM
Sbjct: 228 VKVLSM 233
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A ++DEI++Y++ LQ
Sbjct: 163 VRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKT-DRAAMIDEIVDYVKFLRLQ 221
Query: 200 RQFLSM 205
+ LSM
Sbjct: 222 VKVLSM 227
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDEI++Y++ LQ
Sbjct: 180 VRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKS-DRAAMLDEIVDYVKFLRLQ 238
Query: 200 RQFLSM 205
+ LSM
Sbjct: 239 VKVLSM 244
>gi|414873438|tpg|DAA51995.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 146
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Query: 74 EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEP---SSVKPAEQNSQ 130
ED+S++ VSTS G G G + D + KR KT+ S ++ + E E S+ K +N
Sbjct: 56 EDDSSRIVSTS-GGGGGQDLTDLEAKRSKTNKSSNNKGSLRTEVETDSRSAGKAVSKNIP 114
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAER 158
EPPKQDYIHVRARRGQATDSHSLAER
Sbjct: 115 AAEPPKQDYIHVRARRGQATDSHSLAER 142
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPGIE 219
MK LQDLVPGCN + GKA +LDEIINY+QSLQRQ FLSMKL AVN R++ I+
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNID 54
>gi|297606863|ref|NP_001059108.2| Os07g0193800 [Oryza sativa Japonica Group]
gi|255677582|dbj|BAF21022.2| Os07g0193800, partial [Oryza sativa Japonica Group]
Length = 112
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 97 DGKRIKTSGSRDDNHHSKAEA---EPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSH 153
+ KR+K S D N + EA +S K A++N+ PPEPPKQDYIHVRARRGQATDSH
Sbjct: 32 EAKRLKPMKSSDKNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSH 91
Query: 154 SLAERA 159
SLAER
Sbjct: 92 SLAERV 97
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 46/59 (77%), Gaps = 4/59 (6%)
Query: 171 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRM--NPGIEVFPPKD 225
LQDLVPGCNKV+GKA++LDEIINY+QSLQRQ FLSMKL VN ++ N + PKD
Sbjct: 121 LQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKD 179
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK 206
GQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q +K
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ---VK 319
Query: 207 LEAVNTRMNPGIEV--FPPKDFTQ 228
+ +++ N G + PP+D Q
Sbjct: 320 VLSMSRLGNAGAVMTDLPPEDSNQ 343
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK 206
GQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q +K
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ---VK 319
Query: 207 LEAVNTRMNPGIEV--FPPKDFTQ 228
+ +++ N G + PP+D Q
Sbjct: 320 VLSMSRLGNAGAVMTDLPPEDSNQ 343
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 52/94 (55%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+ RA+RG AT S+AER RR KISERMK LQDLVP +K + +LDE + Y++SLQ
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ 440
Query: 200 RQFLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDT 233
RQ + V ++F Q+ T
Sbjct: 441 RQVQELSDTVVRLEAAAAQKIFSDFQIRQKYLAT 474
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 3/61 (4%)
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLS 204
GQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANKT-DKASMLDEIIDYVKFLQLQVKVLS 227
Query: 205 M 205
M
Sbjct: 228 M 228
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 10/147 (6%)
Query: 65 NGVRKRRDVEDESAKHVSTSS-GNGN-GNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV 122
+ ++ DVE + V++SS G+GN R +D + +K H E+E S
Sbjct: 243 SAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKR------KHRDTEESEGPS- 295
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
+ AE+ S + P ++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV
Sbjct: 296 EDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV- 354
Query: 183 GKALVLDEIINYIQSLQRQFLSMKLEA 209
KA +LDE I Y+++LQ Q M + A
Sbjct: 355 DKASMLDEAIEYLKTLQLQVQIMSMGA 381
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 10/147 (6%)
Query: 65 NGVRKRRDVEDESAKHVSTSS-GNGN-GNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV 122
+ ++ DVE + V++SS G+GN R +D + +K H E+E S
Sbjct: 243 SAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKR------KHRDTEESEGPS- 295
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
+ AE+ S + P ++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV
Sbjct: 296 EDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV- 354
Query: 183 GKALVLDEIINYIQSLQRQFLSMKLEA 209
KA +LDE I Y+++LQ Q M + A
Sbjct: 355 DKASMLDEAIEYLKTLQLQVQIMSMGA 381
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 10/147 (6%)
Query: 65 NGVRKRRDVEDESAKHVSTSS-GNGN-GNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV 122
+ ++ DVE + V++SS G+GN R +D + +K H E+E S
Sbjct: 243 SAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKR------KHRDTEESEGPS- 295
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
+ AE+ S + P ++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV
Sbjct: 296 EDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV- 354
Query: 183 GKALVLDEIINYIQSLQRQFLSMKLEA 209
KA +LDE I Y+++LQ Q M + A
Sbjct: 355 DKASMLDEAIEYLKTLQLQVQIMSMGA 381
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 10/147 (6%)
Query: 65 NGVRKRRDVEDESAKHVSTSS-GNGN-GNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV 122
+ ++ DVE + V++SS G+GN R +D + +K H E+E S
Sbjct: 243 SAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKR------KHRDTEESEGPS- 295
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
+ AE+ S + P ++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV
Sbjct: 296 EDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV- 354
Query: 183 GKALVLDEIINYIQSLQRQFLSMKLEA 209
KA +LDE I Y+++LQ Q M + A
Sbjct: 355 DKASMLDEAIEYLKTLQLQVQIMSMGA 381
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 10/147 (6%)
Query: 65 NGVRKRRDVEDESAKHVSTSS-GNGN-GNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSV 122
+ ++ DVE + V++SS G+GN R +D + +K H E+E S
Sbjct: 243 SAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKR------KHRDTEESEGPS- 295
Query: 123 KPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
+ AE+ S + P ++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV
Sbjct: 296 EDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV- 354
Query: 183 GKALVLDEIINYIQSLQRQFLSMKLEA 209
KA +LDE I Y+++LQ Q M + A
Sbjct: 355 DKASMLDEAIEYLKTLQLQVQIMSMGA 381
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 38/46 (82%), Gaps = 2/46 (4%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
MK LQ LVPGC+KV GKALVLDEIINY+QSLQ Q FLSMKL VN
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVN 46
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
PE KQ + +R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE
Sbjct: 247 PEAKKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEA 305
Query: 192 INYIQSLQRQFLSMKL-EAVNTRMNPGIEVF 221
I Y++SLQ Q M + + M PGI+ +
Sbjct: 306 IEYLKSLQLQVQMMSMGYGMVPMMFPGIQQY 336
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 38/46 (82%), Gaps = 2/46 (4%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
MK LQ LVPGC+KV GKALVLDEIINY+QSLQ Q FLSMKL VN
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVN 46
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQDLVP +K + +LD ++YI+ LQRQ
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 202 FLSM 205
F ++
Sbjct: 404 FKAL 407
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 362
Query: 202 FLSMKLEAVNTRMNPGIEVFPPK 224
+SM V M PG++ + P+
Sbjct: 363 MMSMGCSMV-PMMYPGVQQYMPQ 384
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 50/63 (79%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+R ++++ H+L+ER RR++I+E+M+ LQ+LVP CNK + KA +L+E+I Y++SLQ Q +
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 205 MKL 207
M +
Sbjct: 277 MSM 279
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 324
Query: 202 FLSMKLEAVNTRMNPGIEVFPPK 224
+SM V M PG++ + P+
Sbjct: 325 MMSMGCSMV-PMMYPGVQQYMPQ 346
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 71/120 (59%), Gaps = 11/120 (9%)
Query: 106 SRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKIS 165
RDD+ +AE E+ S+ +P ++ + RR +A + H+L+ER RR++I+
Sbjct: 291 CRDDSDSPSEDAE------CEEASEETKPSRR---YGTKRRTRAAEVHNLSERRRRDRIN 341
Query: 166 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEA-VNTRMNPGIEVFPPK 224
E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q M + + + M PG+ F P+
Sbjct: 342 EKMRALQELIPHCNKT-DKASILDETIEYLKSLQMQVQIMWMTSGMAPMMFPGVHQFIPQ 400
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
A+R +A H+L+ER RR++I+E+M+ LQ+LVP CNK KA +LDE I Y++SLQ Q
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNKT-DKASMLDEAIEYLKSLQLQLQ 291
Query: 204 SMKLEAVNTRMNPGIEVFP 222
M A+ RM P +FP
Sbjct: 292 VMW--AMGGRMAPAPVMFP 308
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 78/129 (60%), Gaps = 14/129 (10%)
Query: 81 VSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYI 140
+S G G+G D GKR + DD ++ SS+KP PP P +Q I
Sbjct: 85 LSLDQGKGHGFLKPDETGKRFQ-----DDVLDNRC----SSMKPPMSQPAPPMPHQQSTI 135
Query: 141 H--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ-- 196
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++
Sbjct: 136 RPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFL 194
Query: 197 SLQRQFLSM 205
LQ + LSM
Sbjct: 195 RLQVKVLSM 203
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%), Gaps = 2/52 (3%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPG 217
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQ +LSM+L AVN R++ G
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFG 52
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%), Gaps = 2/52 (3%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPG 217
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQ +LSM+L AVN R++ G
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFG 52
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +ISERM+ LQDLVP +K A +LD ++YI+ LQ
Sbjct: 280 CRIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQ 339
Query: 200 RQFLSM 205
+QF ++
Sbjct: 340 KQFKTL 345
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%), Gaps = 2/52 (3%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVNTRMNPG 217
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQ +LSM+L AVN R++ G
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFG 52
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ Q
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 204 SMKLEAVNTRMNPGIEVFPP 223
M + A + P + +FPP
Sbjct: 398 IMSM-ASGYYLPPAV-MFPP 415
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ Q
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKTLQMQVQ 320
Query: 204 SMKL---EAVNTRMNPGIEVFPPK 224
M + A M PG+ + P+
Sbjct: 321 MMWMGSGMAPPAVMFPGMHQYLPR 344
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 37/47 (78%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 181
P Q VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NKV
Sbjct: 234 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKV 280
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 353
Query: 204 SMKLEA--VNTRMNPGIEVFPPK 224
M + + M PG+ + P+
Sbjct: 354 MMWMGSGMAPPVMFPGVHQYLPR 376
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQVQ 387
Query: 204 SMKLEAVNTRMNPGIEVFP 222
M + + P + +FP
Sbjct: 388 MMWMGSAGIAAPPAV-MFP 405
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+ RA+RG AT S+AER RR KISERMK LQDLVP +K + +LDE + Y++SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 200 RQF 202
R+
Sbjct: 90 RKV 92
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQVQ 387
Query: 204 SMKLEAVNTRMNPGIEVFP 222
M + + P + +FP
Sbjct: 388 MMWMGSAGIAAPPAV-MFP 405
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 372
Query: 204 SMKLEA--VNTRMNPGIEVFPPK 224
M + + M PG+ + P+
Sbjct: 373 MMWMGSGMAPPVMFPGVHQYLPR 395
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 372
Query: 204 SMKLEA--VNTRMNPGIEVFPPK 224
M + + M PG+ + P+
Sbjct: 373 MMWMGSGMAPPVMFPGVHQYLPR 395
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 8/101 (7%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+++LQ Q
Sbjct: 311 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKTLQMQVQ 369
Query: 204 SM----KLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVS 240
M + A M PG+ + P+ A MPF++
Sbjct: 370 MMWMGGGMAAPPAVMFPGMHQYLPQ---MGPASMARMPFMA 407
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD ++YI+ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 202 FLSM 205
++
Sbjct: 393 VQTL 396
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 40/46 (86%), Gaps = 2/46 (4%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
MK+LQ LVPGC+KV GKAL+LDEIINY+QSLQ Q FLSMKL +++
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLD 46
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 8/101 (7%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+++LQ Q
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKTLQMQVQ 90
Query: 204 SM----KLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPFVS 240
M + A M PG+ + P+ A MPF++
Sbjct: 91 MMWMGGGMAAPPAVMFPGMHQYLPQ---MGPASMARMPFMA 128
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 11/107 (10%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+++ER RR++I+E+M+ LQ+LVP CNK KA +LDE I Y++SLQ Q
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 303
Query: 205 MKLEA-VNTRMNPGI-EVFPPKDFTQQTFDTAGMP-----FVSQATR 244
M + + M PG ++ PP ++A MP F+SQ R
Sbjct: 304 MWMSTGMAPMMIPGAHQLMPPMTM---GLNSARMPPPAVQFLSQMQR 347
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA +LDE I Y++SLQ Q
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 283
Query: 205 MKLEA-VNTRMNPGI-EVFPPKDFTQQTFDTAGMP 237
M + + M PG ++ PP +TA MP
Sbjct: 284 MWMTTGIVPMMFPGTHQLMPPMGM---GLNTACMP 315
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+ +RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD ++YI+ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389
Query: 200 RQ 201
+Q
Sbjct: 390 KQ 391
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 227 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDETIEYLKSLQMQVQI 285
Query: 205 MKLEA-VNTRMNPGIEVFPP 223
M + + + M PG F P
Sbjct: 286 MWMTSGMAPMMFPGAHQFMP 305
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ Q
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 204 SMKLEAVNTRMNPGIEVFPP 223
M + A + P + +FPP
Sbjct: 398 IMSM-ASGYYLPPAV-MFPP 415
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 275
Query: 205 MKLEA-VNTRMNPGIEVFPP 223
M + + M PG F P
Sbjct: 276 MWMTTGMAPMMFPGAHQFMP 295
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 228 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 286
Query: 205 MKLEA-VNTRMNPGIEVFPP 223
M + + M PG F P
Sbjct: 287 MWMTTGMAPMMFPGAHQFMP 306
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQV 89
Query: 205 MKL-EAVNTRMNPGIEVF 221
M + + M PG++ F
Sbjct: 90 MWMGSGIVPVMFPGVQHF 107
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA +LDE I Y++SLQ Q
Sbjct: 401 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 459
Query: 205 MKLEA-VNTRMNPGI-EVFPPKDFTQQTFDTAGMP 237
M + + M PG ++ PP +TA MP
Sbjct: 460 MWMTTGIVPMMFPGTHQLMPPMGM---GLNTACMP 491
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I+Y++SLQ Q
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAISYLKSLQLQVQM 363
Query: 205 MKLEA-VNTRMNPGIEVFPP 223
M + + M PGI+ + P
Sbjct: 364 MSMGCGMVPVMFPGIQQYMP 383
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
+P KQ +R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I
Sbjct: 301 DPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKT-DKASMLDEAI 359
Query: 193 NYIQSLQRQFLSMKLEA-VNTRMNPGIEVFPP 223
Y+++LQ Q M + + M PG++ + P
Sbjct: 360 EYLKTLQLQVQMMSMGCGMMPMMFPGVQQYLP 391
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA +LDE I Y++SLQ Q
Sbjct: 222 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 280
Query: 205 MKLEA-VNTRMNPGI-EVFPPKDFTQQTFDTAGMP 237
M + + M PG ++ PP +TA MP
Sbjct: 281 MWMTTGIVPMMFPGTHQLMPPMGM---GLNTACMP 312
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA +LDE I Y++SLQ Q
Sbjct: 325 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 383
Query: 205 MKLEA-VNTRMNPGI-EVFPPKDFTQQTFDTAGMP 237
M + + M PG ++ PP +TA MP
Sbjct: 384 MWMTTGIVPMMFPGTHQLMPPMGM---GLNTACMP 415
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 333 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 391
Query: 205 MKLEA-VNTRMNPGIEVFPP 223
M + + M PG F P
Sbjct: 392 MWMTTGMAPMMFPGAHQFMP 411
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 294 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQ 353
Query: 202 FLSMKLEAVNTR 213
F ++ + N +
Sbjct: 354 FKTLSEKRANCK 365
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA +LDE I Y++SLQ Q
Sbjct: 226 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 284
Query: 205 MKLEA-VNTRMNPGI-EVFPPKDFTQQTFDTAGMP 237
M + + M PG ++ PP +TA MP
Sbjct: 285 MWMTTGIVPMMFPGTHQLMPPMGM---GLNTACMP 316
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 228 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKA-DKASILDEAIEYLKSLQM 286
Query: 201 QFLSMKLEA-VNTRMNPGIEVFPPKDFTQQTFDTAGMPFVSQATREYSR 248
Q M + + M PG F P ++A MP +Q + SR
Sbjct: 287 QLQIMWMTTGMAPMMFPGAHQFMPP--MAMGMNSACMP-AAQGLNQMSR 332
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD ++YI+ LQ+Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 202 FLSM 205
++
Sbjct: 390 VQTL 393
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 451 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 509
Query: 204 SMKLEA 209
M + A
Sbjct: 510 MMSMGA 515
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 317 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 375
Query: 205 MKLEA-VNTRMNPGIEVFPP 223
M + + M PG F P
Sbjct: 376 MWMTTGMAPMMFPGAHQFMP 395
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 489
Query: 204 SMKLEA 209
M + A
Sbjct: 490 IMSMGA 495
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ-- 201
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQVQ 382
Query: 202 --FLSMKLEAVNTRMNPGIEVF 221
++ + A M PG+ +
Sbjct: 383 MMWMGSGIAAPPAVMFPGVHQY 404
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 338
Query: 204 SMKL 207
M +
Sbjct: 339 MMSM 342
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 522
Query: 204 SMKLEA 209
M + A
Sbjct: 523 MMSMGA 528
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 268
Query: 205 MKL 207
M +
Sbjct: 269 MSM 271
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 425
Query: 204 SMKLEA 209
M + A
Sbjct: 426 IMSMGA 431
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 338
Query: 204 SMKL 207
M +
Sbjct: 339 MMSM 342
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 268
Query: 205 MKL 207
M +
Sbjct: 269 MSM 271
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ Q
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 395
Query: 204 SMKLEAVNTRMNPGIEVFPP 223
M + A M P + FPP
Sbjct: 396 IMSM-ASGYYMPPVM--FPP 412
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD + YI+ LQ Q
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 202 FLSM 205
++
Sbjct: 400 VQTL 403
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQDLVP +K + +LD ++YI+ LQRQ
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 202 FLSM 205
++
Sbjct: 399 VETL 402
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 31/165 (18%)
Query: 55 VNLEHKMAHGNGVRKRRDVEDESAKH----VSTSS---GNGNGNRVNDSDGKR-----IK 102
VNL H+M R R + E+ K V+TSS GNG G+ KR +
Sbjct: 353 VNLHHEMDRDRAGRTMRVHKTEARKAPEATVATSSVCSGNGAGSDELWRQQKRKCQAQAE 412
Query: 103 TSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARRE 162
S S+DD+ + EP ++ + S +R + + H+L+ER RR+
Sbjct: 413 CSASQDDD----LDDEPGVLRKSGTRS--------------TKRSRTAEVHNLSERRRRD 454
Query: 163 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
+I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ Q M +
Sbjct: 455 RINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSM 498
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 347
Query: 204 SMKL 207
M +
Sbjct: 348 VMSM 351
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 359
Query: 202 FLSM 205
F ++
Sbjct: 360 FKTL 363
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 202 F 202
+
Sbjct: 345 Y 345
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 511
Query: 204 SMKLEA 209
M + A
Sbjct: 512 IMSMGA 517
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 516
Query: 204 SMKLEA 209
M + A
Sbjct: 517 IMSMGA 522
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 519
Query: 204 SMKLEA 209
M + A
Sbjct: 520 IMSMGA 525
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 330
Query: 202 FLSMKLEAVNTR 213
+ ++ N +
Sbjct: 331 YKTLSDNRANCK 342
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 31/165 (18%)
Query: 55 VNLEHKMAHGNGVR-------KRRDVEDESAKHVSTSSGNGNGNRVNDSDGKR-----IK 102
VNL H+M R + R + + S SGNG G+ KR +
Sbjct: 297 VNLHHEMGRDRAGRTMPVHKTEARKAPEATVATSSVCSGNGAGSDELWRQQKRKCQAQAE 356
Query: 103 TSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARRE 162
S S+DD+ + EP ++ + S +R + + H+L+ER RR+
Sbjct: 357 CSASQDDD----LDDEPGVLRKSGTRS--------------TKRSRTAEVHNLSERRRRD 398
Query: 163 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
+I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ Q M +
Sbjct: 399 RINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSM 442
>gi|357504213|ref|XP_003622395.1| BHLH transcription factor [Medicago truncatula]
gi|355497410|gb|AES78613.1| BHLH transcription factor [Medicago truncatula]
Length = 141
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 12/77 (15%)
Query: 160 RREKISERMKILQDLVPGCNK-VIGKALVLDEIINYIQSLQRQ----------FLSMKLE 208
RREKISER+K+L+DLVP K VIGK L+L EIINYIQSLQ Q FL ++
Sbjct: 60 RREKISERIKMLEDLVPRYTKLVIGKTLMLYEIINYIQSLQHQVEIHAYVFSIFLHERIN 119
Query: 209 AVNTRMNPGIEVFPPKD 225
+ M+ I+ FP KD
Sbjct: 120 FI-LNMHSSIDCFPSKD 135
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 31/165 (18%)
Query: 55 VNLEHKMAHGNGVR-------KRRDVEDESAKHVSTSSGNGNGNRVNDSDGKR-----IK 102
VNL H+M R + R + + S SGNG G+ KR +
Sbjct: 225 VNLHHEMGRDRAGRTMPVHKTEARKAPEATVATSSVCSGNGAGSDELWRQQKRKCQAQAE 284
Query: 103 TSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARRE 162
S S+DD+ + EP ++ + S +R + + H+L+ER RR+
Sbjct: 285 CSASQDDD----LDDEPGVLRKSGTRS--------------TKRSRTAEVHNLSERRRRD 326
Query: 163 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
+I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ Q M +
Sbjct: 327 RINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSM 370
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD + YI+ LQ Q
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 202 FLSM 205
++
Sbjct: 397 VEAL 400
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 31/165 (18%)
Query: 55 VNLEHKMAHGNGVR-------KRRDVEDESAKHVSTSSGNGNGNRVNDSDGKR-----IK 102
VNL H+M R + R + + S SGNG G+ KR +
Sbjct: 365 VNLHHEMGRDRAGRTMPVHKTEARKAPEATVATSSVCSGNGAGSDELWRQQKRKCQAQAE 424
Query: 103 TSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARRE 162
S S+DD+ + EP ++ + S +R + + H+L+ER RR+
Sbjct: 425 CSASQDDD----LDDEPGVLRKSGTRS--------------TKRSRTAEVHNLSERRRRD 466
Query: 163 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
+I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ Q M +
Sbjct: 467 RINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSM 510
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QF 202
+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQM 415
Query: 203 LSMKLEAVNTRMNPGIEVF 221
+SM V M PGI+ +
Sbjct: 416 MSMGCSMVPM-MFPGIQQY 433
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ Q
Sbjct: 380 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQ 438
Query: 204 SMKL 207
M +
Sbjct: 439 MMSM 442
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
PE KQ +R A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE
Sbjct: 260 PEAKKQVRGSTSTKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEA 318
Query: 192 INYIQSLQRQFLSMKLEAVNTRM-NPGIEVF 221
I Y++SLQ Q M + M PGI+ +
Sbjct: 319 IEYLKSLQLQVQMMSMGCGMVPMIFPGIQQY 349
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 501
Query: 204 SMKL 207
M +
Sbjct: 502 IMSM 505
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 323
Query: 204 SMKLEAVNTRMNPGIEVFP 222
M + M P +FP
Sbjct: 324 MMWM---GGGMAPPAVMFP 339
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 323
Query: 204 SMKLEAVNTRMNPGIEVFP 222
M + M P +FP
Sbjct: 324 MMWM---GGGMAPPAVMFP 339
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 516
Query: 204 SMKL 207
M +
Sbjct: 517 IMSM 520
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 113 SKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRA----RRGQATDSHSLAERARREKISERM 168
KAE EP ++PA ++ R +R + + H+LAER RREKI+E+M
Sbjct: 216 CKAETEPVQIQPATESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKM 275
Query: 169 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVN 211
K LQ L+P CNK K LD+ I Y++SLQ Q M +N
Sbjct: 276 KTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQGMMSPMMN 317
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ Q
Sbjct: 177 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQ 235
Query: 204 SMKL 207
M +
Sbjct: 236 MMSM 239
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 380
Query: 204 SMKL 207
M +
Sbjct: 381 IMSM 384
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 202 F 202
+
Sbjct: 339 Y 339
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 119 PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
P + P++ + +P KQ +R +A + H+L+ER RR++I+E+MK LQ+L+P C
Sbjct: 29 PKPLWPSDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRC 88
Query: 179 NKV-------IGKALVLDEIINYIQSLQRQF 202
NK+ KA +LDE I Y+++LQ Q
Sbjct: 89 NKLSSFTDSQTDKASMLDEAIEYLKTLQLQV 119
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 202 F 202
+
Sbjct: 339 Y 339
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
Query: 149 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
ATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q LSM
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 332
Query: 204 SMKLEAVNTRMNPGIEVFP 222
M + M P +FP
Sbjct: 333 MMWM---GGGMAPRAVMFP 348
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 202 F 202
+
Sbjct: 360 Y 360
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 202 FLSM 205
+ ++
Sbjct: 381 YNTL 384
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ
Sbjct: 301 CKIRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQ 360
Query: 200 RQFLSM-----KLEAVN 211
+QF ++ K + +N
Sbjct: 361 KQFKTLSDKRAKCKCIN 377
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 93 VNDSDGKRIK---TSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQA 149
+N+SD ++++ S NH SS E+ Q P K VRA+RG A
Sbjct: 421 LNNSDHQKVEGGIRGASALTNHPYNLPRSTSSELAMEEFLQDAVPCK-----VRAKRGCA 475
Query: 150 TDSHSLAERARREKISERMKILQDLVPGCNK-VIGKALVLDEIINYIQSLQRQF 202
T S+AER RR +ISERM+ LQ+LVP +K + A +LDE + Y++SLQ+Q
Sbjct: 476 THPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQKQV 529
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 40/46 (86%), Gaps = 2/46 (4%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
M++LQ LVPGC+KV GKAL+LDEIINY+QSLQ Q FLSM++ +++
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMS 46
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 202 FLSM 205
+ ++
Sbjct: 370 YNTL 373
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 67.0 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/39 (79%), Positives = 34/39 (87%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQDL P +K A +LD + YI+ LQ+Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 202 FLSMK 206
++K
Sbjct: 410 VKTLK 414
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT SLAER RR +ISERM+ LQ++VP +K + +LD + YI+ LQ+Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 202 FLSMKLEAVNTR 213
+M + R
Sbjct: 303 LKTMSAKRAKCR 314
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAV 210
MK+LQ LVPGC+KV GKA +LDEIINY+QSLQ Q FLSMKL ++
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASL 45
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQ--DLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
ARR +A + H+L+ER RR++I+E+M+ LQ +L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKT-DKASMLDEAIEYLKSLQLQ 220
Query: 202 FLSMKLEA--VNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
M + + M PG+ + P+ + A MP
Sbjct: 221 LRVMWMGSGMAPPLMFPGVHQYLPRMGVRIGAXAAAMP 258
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ Q
Sbjct: 301 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 359
Query: 204 SMKLEA-VNTRMNPGIEVF 221
M + + M PG + F
Sbjct: 360 MMSMGCGMVPMMFPGAQQF 378
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ Q
Sbjct: 297 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 355
Query: 204 SMKLEA-VNTRMNPGIEVF 221
M + + M PG + F
Sbjct: 356 MMSMGCGMVPMMFPGAQQF 374
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 40/46 (86%), Gaps = 2/46 (4%)
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSMKLEAVN 211
M++LQ LVPGC+KV GKAL+LDEIINY+QSLQ Q FLSM++ +++
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMS 46
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
++ + +P + KQD R +R + + H+L+E+ RREKI+++M+ L+DL+P CNKV K
Sbjct: 313 SDNDGEPEDMVKQDREGNRVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKV-DK 371
Query: 185 ALVLDEIINYIQSLQRQF 202
A +LD+ I+Y+++L+ Q
Sbjct: 372 ASMLDDAIDYLKTLKLQL 389
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 22/164 (13%)
Query: 63 HGNGVRKRRDVED----ESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAE 118
HG V + R D ++A ++S +GNG+R S KR + H A+
Sbjct: 188 HGETVAQPRSQPDARPPDAAAVTASSVCSGNGDR---SQLKR---------SCHLAADC- 234
Query: 119 PSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
SV P E P ++ A+R + + H+++ER RR++I+E+M+ LQ+L+P C
Sbjct: 235 --SVSPDEDMDDEPGATRRSAAR-SAKRSRTAEVHNMSERRRRDRINEKMRALQELIPNC 291
Query: 179 NKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNTRMNPGIEVFP 222
NK I KA +L+E I Y+++LQ Q M + M P + P
Sbjct: 292 NK-IDKASMLEEAIEYLKTLQLQVQMMSM-GTGLCMPPAAMLLP 333
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 202 FLSM 205
+ ++
Sbjct: 256 YNTL 259
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 363 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 421
Query: 202 FLSMKLEAVNTRMNPGIEVF 221
+SM V M PG + +
Sbjct: 422 MMSMGCSMV-PMMFPGFQQY 440
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR KISERM+ LQDLVP +K + +LD + YI+ LQ Q
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 202 FLSM 205
++
Sbjct: 415 VETL 418
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 199 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKA-DKASILDEAIEYLKSLQM 257
Query: 201 QFLSMKLEA-VNTRMNPGIEVFPP 223
Q M + + + M PG F P
Sbjct: 258 QVQVMWMTSGMAPMMFPGSHQFMP 281
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 14/101 (13%)
Query: 102 KTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARR 161
+ SG R N + AE +PA++ + A+R +A H+L+ER RR
Sbjct: 218 RRSGKRKHNDATDAEDVGLECEPAQRTTT-------------AKRRRAAQVHNLSERRRR 264
Query: 162 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 265 DRINEKMKALQELIPHCNKA-DKASMLDEAIEYLKSLQLQL 304
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 190 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKA-DKASILDEAIEYLKSLQM 248
Query: 201 QFLSMKLEA-VNTRMNPGIEVFPP 223
Q M + + + M PG F P
Sbjct: 249 QVQVMWMTSGMAPMMFPGSHQFMP 272
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQL 367
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 202 FLSMKLEAVNTR 213
+ ++ N +
Sbjct: 331 YKTLSDNRANCK 342
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 41/60 (68%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RARRG AT S+AER RR +ISERMK LQDLVP +K A +LDE + Y++ LQ Q
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQV 75
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR KISERM+ LQDLVP + A +LD + YI+ LQ Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 202 FLSMK 206
+++
Sbjct: 363 VKTLE 367
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK K L+++I Y++SLQ Q
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYMKSLQMQIQM 1197
Query: 205 M 205
M
Sbjct: 1198 M 1198
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK K L+++I Y++SL+ Q
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYVKSLEMQI 1625
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK K LD I Y++ LQ Q
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLDAAIEYVKWLQSQI 191
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 113 SKAEAEPSSVKPAE----QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERM 168
KAE EP ++PA Q ++ + + +R + + H+LAER RREKI+E +
Sbjct: 551 CKAETEPVQIQPATIVEIQGTE------EARGSMSRKRSRTAEMHNLAERRRREKINENI 604
Query: 169 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSM 205
K LQ+L+P CNK K LD+ I Y++ LQ Q M
Sbjct: 605 KTLQELIPRCNKST-KVSTLDDAIEYVKWLQSQIQMM 640
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR KISERM+ LQDLVP + A +LD + YI+ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 202 FLSMK 206
+++
Sbjct: 364 VKALE 368
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ Q
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 407
Query: 205 MKL 207
M +
Sbjct: 408 MAM 410
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ Q
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 460
Query: 205 MKL 207
M +
Sbjct: 461 MSM 463
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAV 210
++H+L E+ RR KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ Q +M +
Sbjct: 167 EAHNLTEKRRRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQHQVQAMSVGLA 225
Query: 211 NTRMNPGI--EVFPPKDFTQQTFDTAGM 236
+ + P + + PP F A M
Sbjct: 226 SPAVYPVVQPQCVPPATPVAMPFPAAPM 253
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA RG AT S+AER RR KISERMK LQDLVP ++ A +LD+ + Y++ LQ+Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 202 F 202
Sbjct: 123 V 123
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 81/134 (60%), Gaps = 19/134 (14%)
Query: 81 VSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPA---EQNSQP--PEPP 135
+S G G+G D GKR + DD ++ SS+KP + SQP P P
Sbjct: 85 LSLDQGKGHGFLKPDETGKRFQ-----DDVLDNRC----SSMKPIFHGQPMSQPAPPMPH 135
Query: 136 KQDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
+Q I VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++
Sbjct: 136 QQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVD 194
Query: 194 YIQ--SLQRQFLSM 205
Y++ LQ + LSM
Sbjct: 195 YVKFLRLQVKVLSM 208
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 202 FLSM 205
++
Sbjct: 279 VKTL 282
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I+Y++SLQ Q
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAIDYLKSLQLQVQ 312
Query: 204 SMKLEA-VNTRMNPGIEVFPP 223
M + + M PGI+ + P
Sbjct: 313 MMSMGCGMVPMMFPGIQQYMP 333
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR KISERM+ LQ+LVP +K + +LD + YI+ LQ
Sbjct: 357 CKLRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQ 416
Query: 200 RQFLSM 205
+Q ++
Sbjct: 417 KQVQTL 422
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR KISERM+ LQ+LVP +K + +LD + YI+ LQ
Sbjct: 357 CKLRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQ 416
Query: 200 RQFLSM 205
+Q ++
Sbjct: 417 KQVQTL 422
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ
Sbjct: 283 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQ 342
Query: 200 RQFLSMKLEAVNT 212
+Q +K N
Sbjct: 343 KQVKVLKETQANC 355
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RARRG ATD S+ R RREKI+ER+K LQ LVP KV +LDE I+Y+Q LQ Q
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQV 501
Query: 203 LSMK 206
+K
Sbjct: 502 TLLK 505
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ Q
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 217
Query: 205 MKL 207
M +
Sbjct: 218 MAM 220
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 107 RDDNHHSKAEAEPSSVKPAEQ--NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 164
RD H + A+ + + + NS EP + RA++G A D S+A R RRE+I
Sbjct: 371 RDAKRHKGSTAQRTRFGASSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAARQRRERI 430
Query: 165 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNTRMNPGIEVFPPK 224
S+R+KILQ+L+P +KV +L++ INY++ LQ Q V MN E +PPK
Sbjct: 431 SDRLKILQELIPNGSKV-DLVTMLEKAINYVKFLQLQ--------VKVLMND--EYWPPK 479
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 107 RDDNHHSKAEAEPSSVKPAEQ--NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 164
RD H + A+ + + + NS EP + RA++G A D S+A R RRE+I
Sbjct: 371 RDAKRHKGSTAQRTRFGASSKRGNSHKREPALNTNLKPRAKQGCANDPQSIAARQRRERI 430
Query: 165 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNTRMNPGIEVFPPK 224
S+R+KILQ+L+P +KV +L++ INY++ LQ Q V MN E +PPK
Sbjct: 431 SDRLKILQELIPNGSKV-DLVTMLEKAINYVKFLQLQ--------VKVLMND--EYWPPK 479
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 202 FLSM 205
+ ++
Sbjct: 90 YKTL 93
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+ +ER RR++I+E+MK LQ+LVP CNK KA +LDE I Y++SLQ Q
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNKS-DKASILDEAIEYLKSLQLQVQI 198
Query: 205 MKLEA-VNTRMNPGIEVFPPK 224
M + + M PG P+
Sbjct: 199 MWMTTGMAPMMFPGAHQLMPQ 219
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+E+M+ LQ+L+P C K KA +LDE I Y++SLQ Q
Sbjct: 183 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYKT-DKASMLDEAIEYLKSLQLQLQV 241
Query: 205 MKL-EAVNTRMNPGIEVF 221
M + + + PG++ F
Sbjct: 242 MWMGGGMAPMLFPGVQHF 259
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
+R +A + H+LAER RREKI+ERMK LQ L+P CNK K +L+++I Y++SL+ Q
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKS-TKVSMLEDVIEYVKSLEMQI 203
>gi|449526806|ref|XP_004170404.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 122
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 6 YNFAEIWQFPVPGSGSMSESGGGLGQKGAHFGQHLSQFGT----NREVSGDD--PVNLEH 59
+N +EIW FP+ G S+ +SG L + AH +L+ FG N EVS D P+ L+
Sbjct: 25 FNLSEIWHFPIHGGTSVEDSGPALALRMAHLAHNLTHFGDIAIGNPEVSPTDSLPLQLQQ 84
Query: 60 KMAHGNGV-RKRRDVEDESAKHVST 83
++ HG+GV +KRRD + +S K ST
Sbjct: 85 RLPHGHGVSKKRRDSDQDSPKVSST 109
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +LDE + Y++ LQ
Sbjct: 168 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQ 227
Query: 200 RQF 202
RQ
Sbjct: 228 RQI 230
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK K +LDE I+Y++SLQ L
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKT-DKVSMLDEAIDYLKSLQ---L 69
Query: 204 SMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
+++ + M+P + + + T D A +P
Sbjct: 70 QLQMLVMGKGMSPVVPLELQQYMHYITADPAQLP 103
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ
Sbjct: 290 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ 349
Query: 200 RQFLSMK 206
+Q +K
Sbjct: 350 KQVKVLK 356
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ Q
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 205 M 205
M
Sbjct: 380 M 380
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ Q
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 205 M 205
M
Sbjct: 380 M 380
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ Q
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 204 SMKLEAVNTRMNPGIEVFPP 223
M M G+ V PP
Sbjct: 390 MMS-------MGTGMFVPPP 402
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+ RA+RG AT S+AER RR +ISERMK LQDLVP K A +LDE + Y++SLQ
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQ 62
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ Q
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 383
Query: 205 M 205
M
Sbjct: 384 M 384
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+RR + H+L E+ RR KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ+Q
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSKS-NQASTLDQTIHYMKSLQQQVQ 246
Query: 204 SMKLEAVNTRMNPGI--EVFPPKDFTQQTFDTA 234
+M + + P + + PP F A
Sbjct: 247 AMSVGLAAPAVYPVVQPQCVPPGTPVAMPFPAA 279
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 143 RARRG-QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RARR + + +HSL ER RR KI+E +K LQ LVPGC+K +A LD+ I Y++SLQ+
Sbjct: 112 RARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQH 171
Query: 202 FLSMKLEAVNTRMNPGIEVFP 222
+M + + G+ P
Sbjct: 172 VQAMSVGCIMKPAAAGVSYHP 192
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR KISER++ LQ+LVP K A +LD ++YI+ LQ
Sbjct: 323 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQ 382
Query: 200 RQF 202
+Q
Sbjct: 383 KQV 385
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 137 QDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
QD + +RA+RG AT S+AER RR KISER++ LQ+LVP K A +LD ++Y
Sbjct: 153 QDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDY 212
Query: 195 IQSLQRQF 202
I+ LQ+Q
Sbjct: 213 IKDLQKQV 220
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKV K+ +L+E I Y+++LQ Q
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKSSMLEEAIEYLKTLQLQVQ 376
Query: 204 SMKLEAVNTRMNPGIEVFP 222
M + M P + P
Sbjct: 377 MMSM-GTGLCMPPAAMLLP 394
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 202 FLSMKLEAVNTRMNPGIEVFPPKDFT 227
+ K ++ GIE KDF
Sbjct: 348 VKNSKASSL------GIE----KDFV 363
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRARRG AT S+AER RR +IS+R+K LQDLVP +K + +LD ++YI+ L+
Sbjct: 278 CRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELK 337
Query: 200 RQFLSMKLEAVNT 212
Q +K + N
Sbjct: 338 DQVEKLKHDQANC 350
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ Q
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 324
Query: 205 M 205
M
Sbjct: 325 M 325
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 202 FLSM 205
++
Sbjct: 357 VKAL 360
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 202 FLSM 205
++
Sbjct: 357 VKAL 360
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E ++Y++ LQ
Sbjct: 186 CKIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQ 245
Query: 200 RQF 202
RQ
Sbjct: 246 RQI 248
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I Y+Q L+ Q
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAITYVQCLELQI 813
Query: 203 LSMKLEAV 210
+K +++
Sbjct: 814 KMLKNDSI 821
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ Q
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 204 SMKL 207
M +
Sbjct: 390 MMSM 393
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 135 PKQDYIH-VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
P Y+ +RA RG AT S+AER RR KISERMK LQ+LVP ++ A +LD+ +
Sbjct: 371 PSMVYLKTLRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVE 430
Query: 194 YIQSLQRQ 201
Y++ LQ Q
Sbjct: 431 YVKQLQLQ 438
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 184 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 243
Query: 200 RQF 202
RQ
Sbjct: 244 RQI 246
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ Q
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 173
Query: 204 SMKL 207
M +
Sbjct: 174 MMSM 177
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 128 NSQPPEPPKQDYIH---------VRARRGQATDSHSLAERARREKISERMKILQDLVPGC 178
NS P DY+ VRARRG AT S+AER RR +IS+R+K LQDLVP
Sbjct: 129 NSSLELPGMDDYLQLQQDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNM 188
Query: 179 NKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNT 212
+K + +LD + YI+ L+ Q +K + N
Sbjct: 189 DKQTNTSDMLDLAVEYIKELKDQVEKLKHDQANC 222
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 63.9 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ Q
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQ 56
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 200 RQFLSMKLE 208
RQ + E
Sbjct: 242 RQIQELTEE 250
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NKV KA +L E I+Y++SLQ L
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKV-DKASMLGEAIDYLKSLQ---L 432
Query: 204 SMKLEAVNTRMNPGIEVFP 222
+++ ++ TR+ + + P
Sbjct: 433 QVQMMSMGTRLCMPLMMLP 451
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NKV KA +L E I+Y++SLQ L
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKV-DKASMLGEAIDYLKSLQ---L 426
Query: 204 SMKLEAVNTRMNPGIEVFP 222
+++ ++ TR+ + + P
Sbjct: 427 QVQMMSMGTRLCMPLMMLP 445
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
++ + +P + KQD R RR + H+L+E+ RREKI+++M+ L++L+P CNKV K
Sbjct: 303 SDNDGEPEDMVKQDRDGNRVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKV-DK 361
Query: 185 ALVLDEIINYIQSLQRQFLSMKL 207
A +LD+ I+Y+++L+ Q M +
Sbjct: 362 ASMLDDAIDYLKTLKLQLQIMSM 384
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 202 FLSM 205
++
Sbjct: 377 VKAL 380
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 8/87 (9%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I+Y++SLQ Q
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAIDYLKSLQLQVQ 312
Query: 204 SMKLEAVNT-------RMNPGIEVFPP 223
++L + + M PGI+ + P
Sbjct: 313 RVQLMQMMSMGCGMVPMMFPGIQQYMP 339
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A +LD + YI+ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 202 FLSM 205
++
Sbjct: 393 VKTL 396
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA+RG AT S+AER RR +ISERM+ LQDLVP +K + +LD ++YI+ LQRQ
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 203 LSM 205
++
Sbjct: 93 QTL 95
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 311
Query: 205 MKL---EAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
M + A M PG++ P F +Q +P
Sbjct: 312 MWMGSGMAAAPMMFPGVQ---PPPFIRQMQSPVQLP 344
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +ISER++ LQ+LVP K A +LD ++YI+ LQ
Sbjct: 317 CKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQ 376
Query: 200 RQF 202
+Q
Sbjct: 377 KQV 379
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +ISER++ LQ+LVP K A +LD ++YI+ LQ
Sbjct: 316 CKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQ 375
Query: 200 RQF 202
+Q
Sbjct: 376 KQV 378
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
RR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK K +LDE I+Y++SLQ L
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKT-DKVSMLDEAIDYLKSLQ---L 69
Query: 204 SMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
+++ + M+P + + + T D A +P
Sbjct: 70 QLQMLVMGKGMSPVVPLELQQYMHYITADPAQLP 103
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ Q
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 268
Query: 204 SMKL 207
M +
Sbjct: 269 MMSM 272
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ
Sbjct: 192 CKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQ 251
Query: 200 RQFLSM 205
+Q ++
Sbjct: 252 KQVKAL 257
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ
Sbjct: 298 CKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQ 357
Query: 200 RQ 201
Q
Sbjct: 358 EQ 359
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I+Y+Q L+ Q
Sbjct: 640 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAISYVQCLEFQI 698
Query: 203 LSMKLEAV 210
+K +++
Sbjct: 699 KMLKNDSL 706
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISER++ LQ+LVP K A +LD ++YI+ LQ+Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 202 F 202
Sbjct: 357 V 357
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 202 FLSMKLE 208
+MK E
Sbjct: 301 LQAMKHE 307
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+ RA+RG AT S+AER RR +ISERMK LQDLVP K + +LDE + Y++SLQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
R A +H+L E+ RR KI+ER + LQ LVPGC+ +A LD+ I Y++SLQ Q
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQ--- 248
Query: 205 MKLEAVNTRMNPGIEVFPPKDFTQQTF 231
LEA + +P V P Q++
Sbjct: 249 --LEATSAVGSPAAAVLYPAAVHPQSY 273
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 136 KQDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
+QD + VRA+RG AT S+AER RR +IS+R++ LQDLVP +K + +LD ++
Sbjct: 292 QQDSVACRVRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVD 351
Query: 194 YIQSLQRQFLSMKLEAVNT 212
YI+ LQ Q +K + N
Sbjct: 352 YIKVLQDQIEKLKQDQGNC 370
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 202 F 202
Sbjct: 129 V 129
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
R A +H+L E+ RR KI+ER + LQ LVPGC+ +A LD+ I Y++SLQ Q
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQ--- 135
Query: 205 MKLEAVNTRMNPGIEVFPPKDFTQQTF 231
LEA + +P V P Q++
Sbjct: 136 --LEATSAVGSPAAAVLYPAAVHPQSY 160
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA+RG ATD S+ R RREKI+ER+K LQ+LVP KV +LDE I+Y++ LQ Q
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQV 501
Query: 203 LSMKLEAVNTRMNP----GIEVFPP 223
+K + NP GI++ P
Sbjct: 502 ELLKSDEFWMFANPHNYNGIDISDP 526
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
Query: 124 PAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 183
P S P PP + VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 107 PTTVPSAPHPPPMRP--RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-D 163
Query: 184 KALVLDEIINYIQ--SLQRQFLSM 205
+A++LDEI++Y++ LQ + LSM
Sbjct: 164 RAVMLDEIVDYVKFLRLQVKVLSM 187
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR KISER++ LQ+LVP K + +LD ++YI+ LQ
Sbjct: 325 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQ 384
Query: 200 RQFLSM 205
Q M
Sbjct: 385 MQVKVM 390
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 20/125 (16%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 135 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 193
Query: 202 FLSMKL-EAVNTRMNPGIEVFPPKDFTQQTF-----------DTAGMPFVSQATREY--- 246
LSM+ +++ PG V PP +Q D G V+Q T EY
Sbjct: 194 MLSMRNGLSLHPMCLPG--VLPPVQLSQMRIGIGEENGSLHMDMTGTLPVNQETMEYRLA 251
Query: 247 SRGTS 251
++GTS
Sbjct: 252 NQGTS 256
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I+Y+Q L+ Q
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAISYVQCLEFQI 881
Query: 203 LSMK 206
+K
Sbjct: 882 KMLK 885
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E +NY++ LQ Q
Sbjct: 264 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQLQ 322
Query: 202 F 202
Sbjct: 323 I 323
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K + +LD ++YI+ LQ Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 202 FLSMKLEAVNT 212
+K + N
Sbjct: 355 IEKLKQDQGNC 365
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
Query: 131 PPEPPKQDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
PP P +Q I VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++
Sbjct: 135 PPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMI 193
Query: 189 DEIINYIQ--SLQRQFLSM 205
DEI++Y++ LQ + LSM
Sbjct: 194 DEIVDYVKFLRLQVKVLSM 212
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A +LD + YI+ LQ+Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 202 FLSM 205
++
Sbjct: 231 VKTL 234
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y+++LQ
Sbjct: 179 CRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQ 238
Query: 200 RQFLSMKLEAVNTRMNP 216
Q + + + P
Sbjct: 239 SQIQELTEQQKRCKCKP 255
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR KISER++ LQ+LVP K + +LD ++YI+ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 202 FLSM 205
M
Sbjct: 384 VKVM 387
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD + Y
Sbjct: 86 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 145
Query: 195 IQSLQRQFLSMKLEAVNT 212
I+ LQ Q +K + N
Sbjct: 146 IKELQGQVEKLKHDQANC 163
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+RR ++H+L E+ RR KI+ER+K LQ +VPGC+K +A LD+ I+Y++SLQ Q
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQ 230
Query: 204 SM 205
+M
Sbjct: 231 AM 232
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+ RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I Y+Q L+
Sbjct: 46 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAITYVQCLE 104
Query: 200 RQFLSMKLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
Q +K +++ + + P + Q+ + AG F
Sbjct: 105 LQIKMLKNDSIWPK-----ALGPLPNTLQELLELAGPEF 138
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E +NY++ LQ Q
Sbjct: 261 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQLQ 319
Query: 202 F 202
Sbjct: 320 I 320
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 22/145 (15%)
Query: 78 AKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQ 137
++ + S+G GNGN+ DG+ S+ ++E + ++ AE N P
Sbjct: 301 SRTIGQSTG-GNGNKRKGRDGE------------ESECQSETAELESAEGNKTAPR---- 343
Query: 138 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 197
+RR +A + H+L+ER RRE+I+E+MK LQ+L+P CNK KA +LDE I Y++S
Sbjct: 344 ---SGSSRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKT-DKASMLDEAIEYLKS 399
Query: 198 LQRQFLSMKL-EAVNTRMNPGIEVF 221
LQ Q M + + M PG++ +
Sbjct: 400 LQLQLQVMWMGSGMAPMMFPGVQHY 424
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 124 PAEQNSQPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 182
P E+ + EP P Q +RA+RG AT S+AER RR +ISER+K LQ+L P +K
Sbjct: 327 PVEKFLRFQEPVPHQ----IRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQT 382
Query: 183 GKALVLDEIINYIQSLQRQFLSM 205
A +L+ + YI+ LQRQ ++
Sbjct: 383 STADMLELAVEYIKGLQRQVKTL 405
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 139 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ L
Sbjct: 180 LCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFL 239
Query: 199 QRQF 202
Q+Q
Sbjct: 240 QKQI 243
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD + Y
Sbjct: 302 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 361
Query: 195 IQSLQRQFLSMKLEAVNT 212
I+ LQ Q +K + N
Sbjct: 362 IKELQGQVEKLKHDQANC 379
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD + Y
Sbjct: 302 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 361
Query: 195 IQSLQRQFLSMKLEAVNT 212
I+ LQ Q +K + N
Sbjct: 362 IKELQGQVEKLKHDQANC 379
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
P+PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI
Sbjct: 111 PQPPAM-RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEI 168
Query: 192 INYIQ--SLQRQFLSM 205
++Y++ LQ + LSM
Sbjct: 169 VDYVKFLRLQVKVLSM 184
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RAR+G A D S+A R RRE+IS+R+KILQ+LVP KV +L++ INY++ LQ Q
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQ 416
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +LDE + Y++ LQ
Sbjct: 79 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQ 138
Query: 200 RQF 202
+Q
Sbjct: 139 KQI 141
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
P+PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI
Sbjct: 114 PQPPAM-RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEI 171
Query: 192 INYIQ--SLQRQFLSM 205
++Y++ LQ + LSM
Sbjct: 172 VDYVKFLRLQVKVLSM 187
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 135 PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD + Y
Sbjct: 149 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 208
Query: 195 IQSLQRQFLSMKLEAVNT 212
I+ LQ Q +K + N
Sbjct: 209 IKELQGQVEKLKHDQANC 226
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + +L+E +NY++ LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKV-DISTMLEEAVNYVKFLQTQ 332
Query: 202 F 202
Sbjct: 333 I 333
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 82 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQ 141
Query: 200 RQF 202
+Q
Sbjct: 142 KQI 144
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +LDE + Y++ LQ Q
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 202 F 202
Sbjct: 178 I 178
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RAR+G A D S+A R RRE+IS+R+KILQ+LVP KV +L++ INY++ LQ Q
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQ 416
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
PPE + +R +A + H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE
Sbjct: 88 PPERTRGGSGGGGGKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDE 146
Query: 191 IINYIQSLQR--QFLSMK 206
I Y++ LQ Q LSM+
Sbjct: 147 AIEYLKQLQLQVQMLSMR 164
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K A +LD + +I+ LQ +
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 202 FLSMKLE 208
++K E
Sbjct: 322 LQALKHE 328
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ Q
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKV-DKISILDEAIDYLKTLQLQVQ 437
Query: 204 SMKLEA 209
M + A
Sbjct: 438 VMSMGA 443
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 94 NDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSH 153
ND D + + R+++ S++++ + ++P S+ P PP D RA A D
Sbjct: 218 NDEDDRSLSLQVQRNNSCFSQSDSN-AYLEPNGGASKDPAPPNLDR-KSRATTSAAADPQ 275
Query: 154 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
SL R RRE+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 276 SLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 323
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
R+ RG ATD S+ R RREKI+ER+KILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 305
Query: 203 -------LSMKLEAVNTRMNPGIE--VFPPK 224
L M MN G++ +FP K
Sbjct: 306 KLLSSDDLWMYAPIAFNGMNIGLDLNLFPTK 336
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 108 DDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISER 167
+ +H E+E E+ PP+ ++R +A + H+L+E+ RR +I+E+
Sbjct: 126 ETDHECDCESEEGLEALIEEVQTKAAPPRSS-----SKRSRAAEVHNLSEKRRRSRINEK 180
Query: 168 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLE---AVNTRMNPGIEVFPPK 224
MK LQ+L+P NK KA +LDE I Y++ LQ Q + L ++ PG V P
Sbjct: 181 MKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSLRNGIGLHPMCLPG--VLQPT 237
Query: 225 DFTQ 228
F+Q
Sbjct: 238 QFSQ 241
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
R+ G+A H L E+ RR KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ+Q
Sbjct: 168 RSHHGEA---HKLTEKRRRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQQQV 223
Query: 203 LSMKLEAVNTRMNPGI--EVFPPKDFTQQTFDTA 234
+M + + P + + PP F A
Sbjct: 224 QAMSVGLAAPAVYPIVQPQCMPPGMPVAMPFPAA 257
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RR ++ D H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ Q
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQL 73
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ
Sbjct: 272 CKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 331
Query: 200 RQFLSMKLEAVNT 212
Q ++K E N
Sbjct: 332 HQLQNLKKEQENC 344
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y+++LQ
Sbjct: 176 CRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQ 235
Query: 200 RQFLSMKLEAVNTRMNP 216
Q + + + P
Sbjct: 236 GQIQELTEQQKRCKCKP 252
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA+RG ATD S+ R RRE+I+ER++ LQ LVP KV +L+E INY++ LQ Q
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKV-DIVTMLEEAINYVKFLQLQL 296
Query: 203 LS 204
LS
Sbjct: 297 LS 298
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 78 AKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKA----EAEPSSVKPAEQNSQPPE 133
A S+ N N S K+ T+ RD A +P SVKP
Sbjct: 105 ANKFKYSTPFSNANSFLSSIEKKNPTAEIRDMTFRIAAMQPIHIDPESVKP--------- 155
Query: 134 PPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
PK+ + + + D S+A R RRE+ISERM+ILQ LVPG K + A +LDE I+
Sbjct: 156 -PKRRNVKI------SKDPQSVAARHRRERISERMRILQRLVPGGTK-MDTASMLDEAIH 207
Query: 194 YIQSLQRQFLSMKLEAVNT 212
Y++ L++Q S++ NT
Sbjct: 208 YVKFLKKQVQSLEQAGANT 226
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
R+R+G A D S+A R RRE+IS+R+KILQDLVP +KV +L++ INY++ +Q Q
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
R+R+G A D S+A R RRE+IS+R+KILQDLVP +KV +L++ INY++ +Q Q
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
P PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI
Sbjct: 128 PHPPTM-RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEI 185
Query: 192 INYIQ--SLQRQFLSM 205
++Y++ LQ + LSM
Sbjct: 186 VDYVKFLRLQVKVLSM 201
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS R+K LQDL P +K A +LD + YI+ LQ+Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 312
Query: 205 M-------KLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
M A M PG++ P+ F +Q +P
Sbjct: 313 MWMGSGMAAAAASAPMMFPGVQ---PQQFIRQIQSPVQLP 349
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LDE + Y++ LQ
Sbjct: 23 CRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQ 82
Query: 200 RQF 202
+Q
Sbjct: 83 KQV 85
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD ++YI+ L+
Sbjct: 279 CRVRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELK 338
Query: 200 RQFLSMKLEAVNT 212
+ +K + N
Sbjct: 339 DRVEKLKHDQANC 351
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS R+K LQDL P +K A +LD + YI+ LQ+Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 312
Query: 205 M-------KLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
M A M PG++ P+ F +Q +P
Sbjct: 313 MWMGSGMAAAAASAPMMFPGVQ---PQQFIRQIQSPVQLP 349
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 312
Query: 205 M-------KLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
M A M PG++ P+ F +Q +P
Sbjct: 313 MWMGSGMAAAAASAPMMFPGVQ---PQQFIRQIQSPVQLP 349
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R++ LQ++VP +K A +L+E + Y++ LQ
Sbjct: 166 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 225
Query: 200 RQF 202
+Q
Sbjct: 226 KQI 228
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K A +LD + +I+ LQ Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 202 FLSMKLE 208
++K E
Sbjct: 201 LQALKHE 207
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
S V+ + + S+P PP+ ++R +A + H+L+E+ RR +I+E+MK LQ+L+P N
Sbjct: 102 SHVEKSVEASKPVPPPRSS-----SKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSN 156
Query: 180 KVIGKALVLDEIINYIQSLQRQ 201
K KA +LDE I Y++ LQ Q
Sbjct: 157 KT-DKASMLDEAIEYLKQLQLQ 177
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q
Sbjct: 233 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 291
Query: 205 M-------KLEAVNTRMNPGIEVFPPKDFTQQTFDTAGMP 237
M A M PG++ P+ F +Q +P
Sbjct: 292 MWMGSGMAAAAASAPMMFPGVQ---PQQFIRQIQSPVQLP 328
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKT-DKASMLDEAIEYLKLLQHQL 61
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
P PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI
Sbjct: 126 PHPPAM-RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEI 183
Query: 192 INYIQ--SLQRQFLSM 205
++Y++ LQ + LSM
Sbjct: 184 VDYVKFLRLQVKVLSM 199
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 13/122 (10%)
Query: 86 GNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRAR 145
G+G+G R SD S +H + +P+ P + S P VRAR
Sbjct: 100 GHGSGKRF--SDDVVDNRCSSMKPVYHGQPMQQPAPSAPHQPTSIRPR--------VRAR 149
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQRQFL 203
RGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ LQ + L
Sbjct: 150 RGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVL 208
Query: 204 SM 205
SM
Sbjct: 209 SM 210
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+RR ++H+L E+ RR KI+ER K LQ +VPGC+K +A LD+ I+Y++SLQ Q
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQ 233
Query: 204 SM 205
+M
Sbjct: 234 AM 235
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
P PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI
Sbjct: 145 PHPPAM-RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEI 202
Query: 192 INYIQ--SLQRQFLSM 205
++Y++ LQ + LSM
Sbjct: 203 VDYVKFLRLQVKVLSM 218
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
SS E N + P + RA RG ATD SL R RRE+I+ER++ILQ+LVP
Sbjct: 165 SSCTSEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGT 224
Query: 180 KVIGKALVLDEIINYIQSLQRQF 202
KV + +L+E + Y++ LQ Q
Sbjct: 225 KV-DISTMLEEAVQYVKFLQLQI 246
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 259 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQ 317
Query: 202 F 202
Sbjct: 318 I 318
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 254 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQ 312
Query: 202 F 202
Sbjct: 313 I 313
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 255 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQ 313
Query: 202 F 202
Sbjct: 314 I 314
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
SS E N + P + RA RG ATD SL R RRE+I+ER++ILQ+LVP
Sbjct: 165 SSCTSEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGT 224
Query: 180 KVIGKALVLDEIINYIQSLQRQF 202
KV + +L+E + Y++ LQ Q
Sbjct: 225 KV-DISTMLEEAVQYVKFLQLQI 246
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K + +LD +++I+ LQ
Sbjct: 283 FRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQ 342
Query: 200 RQFLSMK 206
Q ++K
Sbjct: 343 SQLQTLK 349
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 14/99 (14%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ L
Sbjct: 15 TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQ---L 70
Query: 204 SMKLEAVNTRMNPGIEVFPPKDFTQQ-----TFDTAGMP 237
+++ + M P V PP+ QQ T D A MP
Sbjct: 71 QLQMLVMGKGMAP---VVPPE--LQQYMHYITADPAQMP 104
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A +LD + +I+ LQ+Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 202 FLSM 205
++
Sbjct: 397 VKTL 400
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E ++Y+ LQ Q
Sbjct: 272 TRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVHYVNFLQLQ 330
Query: 202 F 202
Sbjct: 331 I 331
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 86 GNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRAR 145
G+G+G R +D D + S + H + P S P P VRAR
Sbjct: 100 GHGSGKRFSD-DVVDNRCSSMKPVFHGQPMQQPPPSA---------PHQPTSIRPRVRAR 149
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQRQFL 203
RGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ LQ + L
Sbjct: 150 RGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVL 208
Query: 204 SM 205
SM
Sbjct: 209 SM 210
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q
Sbjct: 250 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQMQLQ 308
Query: 204 SMKL 207
M +
Sbjct: 309 VMWM 312
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 86 GNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRAR 145
G+G+G R +D D + S + H + P S P P VRAR
Sbjct: 100 GHGSGKRFSD-DVVDNRCSSMKPVFHGQPMQQPPPSA---------PHQPTSIRPRVRAR 149
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQRQFL 203
RGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ LQ + L
Sbjct: 150 RGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVL 208
Query: 204 SM 205
SM
Sbjct: 209 SM 210
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ LQ
Sbjct: 138 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 196
Query: 200 RQFLSM 205
+ LSM
Sbjct: 197 VKILSM 202
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
+R + H+L ER RR+KI++RM+IL++L+P CNK KA +LD+ I Y+++L+ Q
Sbjct: 747 VKRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNKT-DKASMLDDAIEYLKTLKLQI 804
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
R +R +A + H+L+ER RR++I+E+M+ LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 11 TRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQLQ 69
Query: 202 FLSMKLEAVNT 212
K+E +++
Sbjct: 70 LQVPKIELLHS 80
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K K +LDE I+Y++SLQ Q
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQL 73
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 86 GNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRAR 145
G+G+G R +D D + S + H + P S P P VRAR
Sbjct: 37 GHGSGKRFSD-DVVDNRCSSMKPVFHGQPMQQPPPSA---------PHQPTSIRPRVRAR 86
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQRQFL 203
RGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ LQ + L
Sbjct: 87 RGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVL 145
Query: 204 SM 205
SM
Sbjct: 146 SM 147
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 86 GNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRAR 145
G+G+G R +D D + S + H + P S P P VRAR
Sbjct: 100 GHGSGKRFSD-DVVDNRCSSMKPVFHGQPMQQPPPSA---------PHQPTSIRPRVRAR 149
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQRQFL 203
RGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ LQ + L
Sbjct: 150 RGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVL 208
Query: 204 SM 205
SM
Sbjct: 209 SM 210
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 278 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 337
Query: 202 FLSMKLEAVNT 212
++K + N
Sbjct: 338 LQNLKKDQENC 348
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 202 FLSMKLEAVNT 212
++K + N
Sbjct: 343 LQNLKKDQENC 353
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ LQ
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 188
Query: 200 RQFLSM 205
+ LSM
Sbjct: 189 VKVLSM 194
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ
Sbjct: 281 CKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 340
Query: 200 RQFLSMKLEAVNT 212
Q ++K + N
Sbjct: 341 HQLQNLKKDQENC 353
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISER+K LQDL P K A +LD + YI+ LQ++
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 7/74 (9%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
V +R +A H+ +ER RR+KI++RMKILQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 267
Query: 202 FLSMKLEAVNTRMN 215
M +RMN
Sbjct: 268 VSMM------SRMN 275
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ LQ
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 188
Query: 200 RQFLSM 205
+ LSM
Sbjct: 189 VKVLSM 194
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 266 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 324
Query: 202 F 202
Sbjct: 325 I 325
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 265 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 323
Query: 202 F 202
Sbjct: 324 I 324
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 266 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 324
Query: 202 F 202
Sbjct: 325 I 325
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 80
Query: 202 FLSMK 206
LSM+
Sbjct: 81 MLSMR 85
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 263 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 321
Query: 202 F 202
Sbjct: 322 I 322
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQ 199
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ LQ
Sbjct: 127 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 185
Query: 200 RQFLSM 205
+ LSM
Sbjct: 186 VKVLSM 191
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
V +R +A H+ +ER RR+KI++RMK LQ LVP NK KA +LDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKT-DKASMLDEVIEYLKQLQAQ 345
Query: 202 F 202
Sbjct: 346 V 346
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A H+ +ER RR++I+E+MK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASKT-DKASMLDEVIEYLKQLQAQVQ 315
Query: 204 SMKLEAVNTRMNP 216
M + ++ + P
Sbjct: 316 FMSVRSMQQMIMP 328
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q
Sbjct: 256 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQMQLQ 314
Query: 204 SM 205
M
Sbjct: 315 VM 316
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
V +R +A H+ +ER RR+KI++RMK LQ LVP NK KA +LDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKT-DKASMLDEVIEYLKQLQAQ 345
Query: 202 F 202
Sbjct: 346 V 346
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 345
Query: 202 F 202
Sbjct: 346 I 346
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKT-DKASMLDEAIEYLKMLQLQL 73
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ Q
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKV-DKISILDEAIDYLKTLQLQVQ 68
Query: 204 SMKLEA 209
M + A
Sbjct: 69 VMSMGA 74
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 86 GNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRAR 145
G+G+G R SD S H + +P+ P + S P VRAR
Sbjct: 100 GHGSGKRF--SDDVVDNRCSSMKPVFHGQPMQQPAPSAPHQPTSIRP--------RVRAR 149
Query: 146 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQRQFL 203
RGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ LQ + L
Sbjct: 150 RGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQVKVL 208
Query: 204 SM 205
SM
Sbjct: 209 SM 210
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 345
Query: 202 F 202
Sbjct: 346 I 346
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K K +LDE I+Y++SLQ Q
Sbjct: 15 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQL 72
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
Query: 131 PPEPPKQDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
PP P +Q I VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP +K +A ++
Sbjct: 137 PPMPHQQSSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSKT-DRAAMI 195
Query: 189 DEIINYIQ--SLQRQFLSM 205
DEI++Y++ LQ + LSM
Sbjct: 196 DEIVDYVKFLRLQVKVLSM 214
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
+R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 180 TKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 238
Query: 202 FLSMK 206
LSMK
Sbjct: 239 MLSMK 243
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 12/93 (12%)
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
S+ P+ QPP+ P++ + + ++D ++A R RRE++SER+++LQ LVPG +
Sbjct: 253 SASDPSFAAPQPPQRPRRKNVRI------SSDPQTVAARLRRERVSERLRVLQRLVPGGS 306
Query: 180 KVIGKALVLDEIINYIQSLQRQFLSMKLEAVNT 212
K + A +LDE +Y+ +FL +LEA+ T
Sbjct: 307 K-MDTATMLDEAASYL-----KFLKSQLEALET 333
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKT-DKASMLDEAIEYLKMLQLQL 73
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK KA +LDE I Y++ LQ L
Sbjct: 592 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQ---LQ 647
Query: 205 MKLEAVNTRMNPGIEVFPP 223
+++ ++ T M V PP
Sbjct: 648 LQMMSIRTGMTLPPMVMPP 666
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
++R +A + H+ +ER RR++I+E+M+ LQ L+P NK KA +L+E I Y++SLQ Q
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKT-DKASMLEEAIEYLKSLQFQLQ 414
Query: 204 SMKL-EAVNTRMNPGIEVF 221
M + + M PGI+ +
Sbjct: 415 VMWMGSGMTPVMFPGIQHY 433
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 322
Query: 202 FLSMKLEAVNTRMNP 216
M +++ M P
Sbjct: 323 VQMMNRINMSSMMLP 337
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Query: 94 NDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIH--VRARRGQATD 151
ND D + + R+ + S++++ + ++P S+ P PP +H RA G ATD
Sbjct: 219 NDEDDRSLSLQAQRN-SCFSQSDSN-AYLEPNGGASKDPAPPN---LHRKSRATTGAATD 273
Query: 152 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
SL R RRE+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 274 PQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 323
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+RR +A + H+ +ER RR++I+E+M+ LQ L+P NK KA +L+E I Y++SLQ Q
Sbjct: 356 SRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKT-DKASMLEEAIEYLKSLQFQLQ 414
Query: 204 SMKL-EAVNTRMNPGIEVF 221
M + + M PGI+ +
Sbjct: 415 VMWMGGGMTPVMFPGIQHY 433
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 228
Query: 202 FLSMK 206
LSM+
Sbjct: 229 MLSMR 233
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
R+ RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 12/137 (8%)
Query: 67 VRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAE 126
+R +V+ +S K +S GN +V S +R K +++ S SS +E
Sbjct: 171 IRTSNNVQIKSRKGTESS---GNSKKV--SSTRRRKCEEEQENGRSSCDMNSCSSDNSSE 225
Query: 127 QNSQPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
++ P PK RA RG ATD SL R RRE+I+ER++ILQ LVP KV +
Sbjct: 226 DDNNNASPKPK-----TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DIS 279
Query: 186 LVLDEIINYIQSLQRQF 202
+L+E ++Y++ LQ Q
Sbjct: 280 TMLEEAVHYVKFLQLQI 296
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
R +RG ATD S+ RARREKI+ER++ LQ L+P KV +LDE ++Y+Q L+RQ
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGKV-DIVTMLDEAVHYVQFLKRQV 506
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 228
Query: 202 FLSMK 206
LSM+
Sbjct: 229 MLSMR 233
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 12/137 (8%)
Query: 67 VRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAE 126
+R +V+ +S K +S GN +V S +R K +++ S SS +E
Sbjct: 171 IRTSNNVQIKSRKGTESS---GNSKKV--SSTRRRKCEEEQENGRSSCDMNSCSSDNSSE 225
Query: 127 QNSQPPEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 185
++ P PK RA RG ATD SL R RRE+I+ER++ILQ LVP KV +
Sbjct: 226 DDNNNASPKPK-----TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DIS 279
Query: 186 LVLDEIINYIQSLQRQF 202
+L+E ++Y++ LQ Q
Sbjct: 280 TMLEEAVHYVKFLQLQI 296
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 264 TRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQYVKFLQLQ 322
Query: 202 F 202
Sbjct: 323 I 323
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K + +LD +++I+ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 202 FLSMK 206
++K
Sbjct: 194 LQTLK 198
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNK KA +LDE I Y++SLQ Q
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKA-DKASMLDEAIEYLKSLQLQLQ 483
Query: 204 SMKL 207
M +
Sbjct: 484 IMSM 487
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER+KILQ +VP KV + +L+E ++Y++ LQ
Sbjct: 270 TRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKV-DISTMLEEAVHYVKFLQ-- 326
Query: 202 FLSMKLEAV 210
L +K++A+
Sbjct: 327 -LQIKVKAL 334
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 140 IHVRAR-----RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
+H R R R ++T+ H L ER RR++ +++M+ LQDL+P C K KA +LDE I Y
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKY 274
Query: 195 IQSLQRQFLSMKL 207
+++LQ Q M +
Sbjct: 275 MRTLQLQVQMMSM 287
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 173 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQ 232
Query: 200 RQF 202
++
Sbjct: 233 QKI 235
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 140 IHVRAR-----RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
+H R R R ++T+ H L ER RR++ +++M+ LQDL+P C K KA +LDE I Y
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKY 274
Query: 195 IQSLQRQFLSMKL 207
+++LQ Q M +
Sbjct: 275 MRTLQLQVQMMSM 287
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A LD I I+ LQ+Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 202 FLSM 205
S+
Sbjct: 396 VKSL 399
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
++R +A H L+ER RR+KI+E MK LQ+L+P C K ++ +LD++I Y++SLQ Q
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQI 330
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +ISER+K LQDL P K A +LD + +I+ LQ+Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 204 SMKL 207
M +
Sbjct: 311 VMWM 314
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 204 SMKL 207
M +
Sbjct: 311 VMWM 314
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD + +I+ LQ Q
Sbjct: 208 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQ 267
Query: 202 FLSMKLEAVNT 212
+ E N
Sbjct: 268 VQKLHKEMENC 278
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK KA +LDE I+Y++ LQ L
Sbjct: 730 TKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIDYLKILQ---L 785
Query: 204 SMKLEAVNTRMNPGIEVFPP 223
+++ ++ T M V PP
Sbjct: 786 QLQMMSIRTGMTLPPMVMPP 805
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
ARR ++H+L E+ RR KI +++K L+ LVPGC+ +A +LD+ I +I+SLQ+Q
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQI 77
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 277 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 335
Query: 202 FLSMKLEAVNTRMNP 216
M + M P
Sbjct: 336 VQMMSRMNIQPVMLP 350
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 152
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265
Query: 202 FLSMKLEAVNTRMN 215
M +RMN
Sbjct: 266 VSMM------SRMN 273
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 204 SMKL 207
M +
Sbjct: 311 VMWM 314
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265
Query: 202 FLSMKLEAVNTRMN 215
M +RMN
Sbjct: 266 VSMM------SRMN 273
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ-- 199
+RA+RG AT S+AER RR +IS R+K LQDLVP +K A +LD + +I+ LQ
Sbjct: 299 IRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGE 358
Query: 200 RQFLSMKLEAVNTRMNP 216
Q L +LE P
Sbjct: 359 VQKLHKELENCTCGCKP 375
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
++R +A H L+ER RR+KI+E MK LQ+L+P C K ++ +LD++I Y++SLQ Q
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQI 330
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQYVKFLQLQI 243
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
++R +A + H+L+E+ RR KI+E++K LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 87 SKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQ 143
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E ++Y++ LQ Q
Sbjct: 238 RASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQI 296
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 6/70 (8%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV------IGKALVLDEIINYIQS 197
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNKV KA +LDE I Y++S
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 198 LQRQFLSMKL 207
LQ Q M +
Sbjct: 485 LQLQLQIMSM 494
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 103 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQ 162
Query: 200 RQF 202
++
Sbjct: 163 QKI 165
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 157
Query: 202 FLSMK 206
LSM+
Sbjct: 158 MLSMR 162
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RREKI+ER++ LQ+LVP KV + +L++ I+Y++ LQ Q
Sbjct: 198 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQ 256
Query: 202 F 202
Sbjct: 257 I 257
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 17/152 (11%)
Query: 71 RDVEDESAKHVSTSSGNGN------GNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVK- 123
RDV A +++ +S G G+ V +S +SG+ D + ++ + S +
Sbjct: 105 RDVRFADASYLAVNSTCGGVKLSDPGDFVKESSDNAFSSSGAVDSDTNAPLKRRGLSSEN 164
Query: 124 -------PAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 176
+E P P D ++R ++ + H+++E+ RR +I+E+MK LQ+L+P
Sbjct: 165 DLGDFSCDSEGGDLPEVPSSTDLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIP 224
Query: 177 GCNKVIGKALVLDEIINYIQSLQR--QFLSMK 206
NK KA +LDE I Y++ LQ Q LSM+
Sbjct: 225 NSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 255
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 157
Query: 202 FLSMK 206
LSM+
Sbjct: 158 MLSMR 162
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K A +LD +++I+ LQ +
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 202 FLSMK 206
++K
Sbjct: 203 LQALK 207
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
RR +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I Y++SLQ Q
Sbjct: 334 TRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNKS-DKASMLDEAIEYLKSLQLQLQ 392
Query: 204 SMKL-EAVNTRMNPGIEVF 221
M + V M PG++ +
Sbjct: 393 LMWMGGGVAPMMFPGVQHY 411
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
RR +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I Y++SLQ Q
Sbjct: 334 TRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNKS-DKASMLDEAIEYLKSLQLQLQ 392
Query: 204 SMKL-EAVNTRMNPGIEVF 221
M + V M PG++ +
Sbjct: 393 LMWMGGGVAPMMFPGVQHY 411
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+RR +A H+ +ER RR++I+++MK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 243 SRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIEYLKQLQAQVQ 301
Query: 204 SMKLEAVNTRMNP 216
+M + + M P
Sbjct: 302 AMSVRNMPQMMMP 314
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD S+ R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 265
Query: 202 F 202
Sbjct: 266 I 266
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKV-DISTMLEEAVQYVKFLQLQI 306
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 121 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 179
Query: 202 FLSMK 206
L+M+
Sbjct: 180 MLTMR 184
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA +G ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 224 TRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 282
Query: 202 F 202
Sbjct: 283 I 283
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K A +LD + +I+ LQ Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 202 FLSMKLE 208
++K E
Sbjct: 87 LQALKHE 93
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RREKI+ER++ LQ+LVP KV + +L++ I+Y++ LQ Q
Sbjct: 184 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQ 242
Query: 202 F 202
Sbjct: 243 I 243
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ Q
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 160
Query: 202 FLSMK 206
LSM+
Sbjct: 161 MLSMR 165
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 136 KQDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 193
+QD + VRA+RG AT S+AER RR +ISE+++ LQ LVP +K A +LD ++
Sbjct: 138 QQDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVD 197
Query: 194 YIQSLQRQFLSMK 206
+I+ LQ + ++K
Sbjct: 198 HIRGLQSELQALK 210
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
+ RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E Y++ LQ
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAAQYVKFLQL 247
Query: 201 QF 202
Q
Sbjct: 248 QI 249
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 200
Query: 202 FLSMK 206
L+M+
Sbjct: 201 MLTMR 205
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 ARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 202 F 202
Sbjct: 296 I 296
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QF 202
+R +A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ Q
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQM 217
Query: 203 LSMK 206
LSM+
Sbjct: 218 LSMR 221
>gi|224058495|ref|XP_002299530.1| predicted protein [Populus trichocarpa]
gi|222846788|gb|EEE84335.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 13/89 (14%)
Query: 152 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSM-----K 206
SH+L+ER +REK+++R IL+ +VP +KV+ K +LDE I Y+Q L+R+ +
Sbjct: 431 SHALSERKQREKLNKRFMILKSIVPSISKVVDKVSILDETIEYLQELERKVEELGSNREL 490
Query: 207 LEAVNTRMNPGIEVFPPKDFTQQTFDTAG 235
LE + R P+D ++T D G
Sbjct: 491 LEVLTKR--------KPQDTAERTSDNYG 511
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS+R+K LQ L P +K A +LD + YI+ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 110 NHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMK 169
+H E+E ++ S P PP+ ++R +A + H+L+E+ RR +I+E+MK
Sbjct: 106 DHECDCESEEGLEALIDEMSVKPAPPRS------SKRTRAAEVHNLSEKRRRSRINEKMK 159
Query: 170 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
LQ+L+P +K KA +LDE I Y++ LQ Q
Sbjct: 160 ALQNLIPNSSKT-DKASMLDEAIEYLKLLQLQ 190
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG------KALVLDEIIN 193
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + + +LDE +
Sbjct: 414 CRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVE 473
Query: 194 YIQSLQRQF 202
Y++ LQ+Q
Sbjct: 474 YMKFLQKQV 482
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 202 F 202
Sbjct: 296 I 296
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS+R+K LQ L P +K A +LD + YI+ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 202 F 202
Sbjct: 296 I 296
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 275
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R +A + H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 212
Query: 202 FLSMK 206
LSM+
Sbjct: 213 MLSMR 217
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225
Query: 202 F 202
Sbjct: 226 I 226
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 150 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSM 205
++HSL E+ RR KI E++K LQ LVPGC +A LD+ I YI+SLQ+ L +
Sbjct: 164 AEAHSLTEKRRRLKIKEKLKTLQQLVPGCPNNSNQASTLDQTIRYIKSLQQHILQV 219
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225
Query: 202 F 202
Sbjct: 226 I 226
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD + +I+ LQ +
Sbjct: 279 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 338
Query: 202 FLSMKLEAVNT 212
+ E N
Sbjct: 339 VQKLNKELENC 349
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-HISTMLEEAVQYVKFLQLQ 295
Query: 202 F 202
Sbjct: 296 I 296
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
VRA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD + +I+ LQ +
Sbjct: 332 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 391
Query: 202 FLSMKLEAVNT 212
+ E N
Sbjct: 392 VQKLNKELENC 402
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKS-DKASMLDEVIEYLKQLQAQ 322
Query: 202 F 202
Sbjct: 323 L 323
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 140 IHVRAR-----RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 194
+H R R R ++T+ H L ER RR++ +++M+ LQD++P C K KA +LDE + Y
Sbjct: 213 VHARIRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDILPNCYK-DDKASLLDEAVKY 271
Query: 195 IQSLQRQFLSMKL 207
+++LQ Q M +
Sbjct: 272 MRTLQHQVQMMSM 284
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 226
Query: 203 LSMKL 207
+L
Sbjct: 227 KVCRL 231
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
H+L+ER RR+KI+E+++ L++L+P CNK + KA +LD+ I+Y+++L+ Q M +
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
H+L+ER RR+KI+E+++ L++L+P CNK + KA +LD+ I+Y+++L+ Q M +
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR-- 200
R +R +A + H+L+E+ RR KI+E+MK LQ LVP +K KA +LD+ I Y++ LQ
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKT-DKASMLDDAIEYLKHLQLQV 103
Query: 201 QFLSMK 206
Q LSM+
Sbjct: 104 QMLSMR 109
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 7/92 (7%)
Query: 120 SSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 179
++++P + + +PPK+ + + + D S+A R RRE+ISE+++ILQ LVPG
Sbjct: 129 AAMQPVHIDPESVKPPKRRNVKI------SKDPQSVAARHRRERISEKIRILQRLVPGGT 182
Query: 180 KVIGKALVLDEIINYIQSLQRQFLSMKLEAVN 211
K + A +LDE I+Y++ L+ Q S++ A N
Sbjct: 183 K-MDTASMLDEAIHYVKFLKTQVQSLERAAAN 213
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKKLQLQV 209
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LD I+Y++SL
Sbjct: 199 RRSRAAEVHNLSER-RRDRINERMKALQELIPHCSKT-DKASILDGAIDYMKSL 250
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKT-DKASMLDEAIEYLKLLQHQL 61
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 131 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 190
P P + ++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE
Sbjct: 179 PEVPSSTNLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDE 237
Query: 191 IINYIQSLQR--QFLSMK 206
I Y++ LQ Q LSM+
Sbjct: 238 AIEYLKQLQLQVQMLSMR 255
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E Y++ LQ Q
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 255
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA+RG ATD S+ R RRE+I+ER+K LQ LVP KV +L+E I+Y++ LQ Q
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKV-DIVTMLEEAIHYVKFLQLQ 269
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A H+ +ER RR++I+++MK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQVQM 278
Query: 205 MKL 207
M +
Sbjct: 279 MSV 281
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
+ +RA+RG AT S+AER RR KISERM+ LQDLVP +K+ L +
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKICWTWLWI 378
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA RG +TD SL R RRE+I+ER+K LQ LVP KV + +L+E ++Y++ LQ Q
Sbjct: 215 ARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKV-DMSTMLEEAVHYVKFLQLQ 273
Query: 202 F 202
Sbjct: 274 I 274
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +ISE++K L+ L P +K A +LD + YI+ LQ
Sbjct: 165 CKIRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQ 224
Query: 200 RQFLSM 205
Q ++
Sbjct: 225 EQVKTL 230
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 11/84 (13%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
+EQ ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K K
Sbjct: 39 SEQPTRPARP--------RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DK 89
Query: 185 ALVLDEIINYIQSLQR--QFLSMK 206
A +LD+ I Y++ LQ Q LSM+
Sbjct: 90 ASMLDDAIEYLKQLQLQVQMLSMR 113
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
RA+RG AT S+AER RR +IS ++K LQ+LVP +K A +LD + +I+ LQ
Sbjct: 229 CRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQ 288
Query: 200 RQFLSMK 206
Q S++
Sbjct: 289 HQVESLE 295
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 11/84 (13%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
+EQ ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K K
Sbjct: 39 SEQPTRPARP--------RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DK 89
Query: 185 ALVLDEIINYIQSLQR--QFLSMK 206
A +LD+ I Y++ LQ Q LSM+
Sbjct: 90 ASMLDDAIEYLKQLQLQVQMLSMR 113
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLS 204
RR +A H+ +ER RR++I+++MK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQVQM 240
Query: 205 MKL 207
M +
Sbjct: 241 MSV 243
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 149 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QFLSMK 206
A + H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q LSM+
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 142
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS ++K LQ+LVP +K + +LD + +I+ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 202 FLSMKLEAVNT 212
+ E N
Sbjct: 352 IQKLNKEVENC 362
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 265 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQ 324
Query: 202 F 202
Sbjct: 325 V 325
>gi|145712876|gb|ABP96467.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712884|gb|ABP96471.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712888|gb|ABP96473.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712890|gb|ABP96474.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712894|gb|ABP96476.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712896|gb|ABP96477.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712900|gb|ABP96479.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712902|gb|ABP96480.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SL
Sbjct: 199 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSL 251
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 11/84 (13%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
+EQ ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K K
Sbjct: 17 SEQPTRPARP--------RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DK 67
Query: 185 ALVLDEIINYIQSLQR--QFLSMK 206
A +LD+ I Y++ LQ Q LSM+
Sbjct: 68 ASMLDDAIEYLKQLQLQVQMLSMR 91
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A + H+L+ER RR++I+E+MK LQ L+P +K KA +L+E I Y++SLQ Q
Sbjct: 197 ARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKT-DKASMLEEAIEYLKSLQLQLQ 255
Query: 204 SMKL-EAVNTRMNPGIEVFPPKDFTQQTFDTAGMPF 238
M + + M PGI+ + +Q A PF
Sbjct: 256 LMWMGSGMAPIMFPGIQHY----MSQMGMGMATPPF 287
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
A+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQLQL 76
>gi|145712878|gb|ABP96468.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712880|gb|ABP96469.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712882|gb|ABP96470.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712886|gb|ABP96472.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712892|gb|ABP96475.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712898|gb|ABP96478.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Query: 145 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 198
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SL
Sbjct: 199 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSL 251
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--Q 201
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 250
Query: 202 FLSMK 206
LSM+
Sbjct: 251 MLSMR 255
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RARRG AT S+AER RR KISE +K L DLVP +K A +L+ + Y++ L+ +
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 202 FLSMKLE 208
MK E
Sbjct: 617 IEQMKEE 623
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Query: 157 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ--FLSM 205
+R RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|77556450|gb|ABA99246.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|218187186|gb|EEC69613.1| hypothetical protein OsI_38987 [Oryza sativa Indica Group]
gi|222617411|gb|EEE53543.1| hypothetical protein OsJ_36752 [Oryza sativa Japonica Group]
Length = 265
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 143 RARRGQA-TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+ARR ++H L E+ RR +I+E+ K+LQ LVPGC+K ++ LD I+Y++SLQ+Q
Sbjct: 146 KARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKC-SQSSTLDRTIHYMKSLQQQ 204
Query: 202 FLSM 205
+M
Sbjct: 205 LQAM 208
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
+RA+RG AT S+AER RR +IS ++K LQDLVP +K A +L+ + +I+ LQ
Sbjct: 261 CKIRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQ 320
Query: 200 RQF--LSMKLEAVNT 212
+ L +LE
Sbjct: 321 NEVEKLHKELEGCTC 335
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR-- 200
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K KA +LD+ I Y++ LQ
Sbjct: 41 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKT-DKASMLDDAIEYLKQLQLQV 99
Query: 201 QFLSMK 206
Q LSM+
Sbjct: 100 QMLSMR 105
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 138 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 197
D +HV R+G D RR++I E+M+ LQ+L+P CNK KA +LDE I Y++S
Sbjct: 179 DSVHVHKRKGMCRDESDSRSERRRDRIKEKMRALQELIPHCNKT-DKASILDETIEYLKS 237
Query: 198 LQRQFLSMKLEAVNTRMNPGIEVFP 222
LQ Q M + + M VFP
Sbjct: 238 LQMQVQIMWMTSGMVPM-----VFP 257
>gi|380006415|gb|AFD29598.1| DEL65 [Gossypium arboreum]
Length = 620
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 8/84 (9%)
Query: 133 EPPKQDYIHVRARRGQATD---SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 189
E P+ + + A R +A + +H L+ER RREKI+ER+ IL+ LVP NK K +LD
Sbjct: 414 ESPETNAVRDAAWRPEADEICGNHVLSERKRREKINERLMILKSLVPANNKA-DKVSILD 472
Query: 190 EIINYIQSLQRQFLSM----KLEA 209
I Y+Q+L+R+ + KLEA
Sbjct: 473 VTIEYLQALERRVAELESCRKLEA 496
>gi|224071909|ref|XP_002303592.1| predicted protein [Populus trichocarpa]
gi|222841024|gb|EEE78571.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 152 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK----- 206
SH L+ER RREK+++R IL+ +VP +KV K +LD+ I Y+Q L+R+ ++
Sbjct: 428 SHVLSERRRREKLNKRFMILKSIVPSISKV-DKVSILDDTIQYLQELERKVEELECRREL 486
Query: 207 LEAVNTRMNPGIEVFPPKDFTQQTFDTAG 235
LEA+ R P+D ++T D G
Sbjct: 487 LEAITKR--------KPEDTVERTSDNCG 507
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA RG AT+ SL R RRE+I+ER++ILQ+LVP KV + +L+E Y++ LQ Q
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 253
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 64 GNGVRKRRDVE---DESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPS 120
N R++ + E D+ A S S + N + S KR N H K A PS
Sbjct: 311 ANTFRRKPNAEKYIDQLAAATSICSRRAS-NDLTHSSLKRT--------NAHLKEMASPS 361
Query: 121 SVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 180
E + E PK ++ + HSL+ER RR+KI+++M+ LQ L+P +K
Sbjct: 362 -----ENADEEEEIPK----STSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDK 412
Query: 181 VIGKALVLDEIINYIQSLQRQFLSMKL 207
V KA +LD+ I Y+++LQ Q M +
Sbjct: 413 V-DKASMLDKAIEYLKTLQLQLQMMSM 438
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA+RG AT S+AER RR +IS ++K LQ+LVP +K A +LD + +I+ LQ Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 25/80 (31%)
Query: 150 TDSHSLAERA----------------------RREKISERMKILQDLVPGCNKVIGKALV 187
TD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKASM 278
Query: 188 LDEIINYIQSLQRQ--FLSM 205
LDEII+Y++ LQ Q LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 25/80 (31%)
Query: 150 TDSHSLAERA----------------------RREKISERMKILQDLVPGCNKVIGKALV 187
TD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKASM 277
Query: 188 LDEIINYIQSLQRQ--FLSM 205
LDEII+Y++ LQ Q LSM
Sbjct: 278 LDEIIDYVKFLQLQVKVLSM 297
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA+RG AT S+AER RR +IS ++K LQ+LVP +K A +LD + +I+ LQ Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD + +I+ LQ +
Sbjct: 77 IRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDFAVQHIKGLQNE 136
Query: 202 FLSMKLEAVNT 212
+ E N
Sbjct: 137 VEKLHKEMENC 147
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQR 200
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K KA +LD+ I Y++ LQ
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKT-DKASMLDDAIEYLKHLQLQV 98
Query: 201 QFLSMK 206
Q LSM+
Sbjct: 99 QMLSMR 104
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
RA+RG AT S+AER RR +IS ++K LQ+LVP +K A +LD + +I+ LQ Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQR 200
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K KA +LD+ I Y++ LQ
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKT-DKASMLDDAIEYLKHLQLQV 98
Query: 201 QFLSMK 206
Q LSM+
Sbjct: 99 QMLSMR 104
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 149 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QFLSMK 206
A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTMR 246
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
+PPK+ + + + D S+A R RRE+ISER+KILQ LVPG K + A +LDE I
Sbjct: 127 KPPKRRNVKI------SKDPQSVAARHRRERISERIKILQRLVPGGTK-MDTASMLDEAI 179
Query: 193 NYIQSLQRQFLSMK 206
+Y++ L++Q +++
Sbjct: 180 HYVKFLKKQVQTLE 193
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ--SLQR 200
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K KA +LD+ I Y++ LQ
Sbjct: 42 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKT-DKASMLDDAIEYLKHLQLQV 100
Query: 201 QFLSMK 206
Q LSM+
Sbjct: 101 QMLSMR 106
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 133 EPPKQDYIHVRARRGQATDS--------HSLAERARREKISERMKILQDLVPGCNKVIGK 184
E P +DY + R ++ H +ER RR+KI++RMK LQ LVP +K K
Sbjct: 211 EVPDEDYKATKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRMKELQKLVPNSSKT-DK 269
Query: 185 ALVLDEIINYIQSLQRQFLSMKLEAVNTRM 214
A +LDE+I Y++ LQ Q M + T M
Sbjct: 270 ASMLDEVIQYMKQLQAQVQMMNWMKMYTSM 299
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 25/80 (31%)
Query: 150 TDSHSLAERA----------------------RREKISERMKILQDLVPGCNKVIGKALV 187
TD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKASM 278
Query: 188 LDEIINYIQSLQRQ--FLSM 205
LDEII+Y++ LQ Q LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+A +G ATD SL R RRE+I +R++ILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 240 TKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 298
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 149 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QFLSMK 206
A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
+PPK+ + + + D S+A R RRE+ISE+++ILQ +VPG K + A +LDE I
Sbjct: 168 KPPKRRNVKI------SKDPQSIAARHRRERISEKIRILQRMVPGGTK-MDTASMLDEAI 220
Query: 193 NYIQSLQRQFLSMKLEA 209
+Y++ L+ Q S++ A
Sbjct: 221 HYVKFLKTQLKSLQERA 237
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 125 AEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
+EQ ++P P R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K K
Sbjct: 17 SEQPTRPARP--------RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DK 67
Query: 185 ALVLDEIINYIQSLQRQF 202
A +LD+ I Y++ LQ Q
Sbjct: 68 ASMLDDAIEYLKQLQLQV 85
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK 206
G ATD S+ RARREKI+ER++ LQ L+P KV +LDE ++Y+Q L+RQ +K
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGKV-DIVTMLDEAVHYVQFLKRQVTLLK 59
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+RA+RG AT S+AER RR +IS ++K LQ+LVP +K + +LD + +I+ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 202 F 202
Sbjct: 352 I 352
>gi|4218118|emb|CAA22972.1| putative protein [Arabidopsis thaliana]
gi|7269735|emb|CAB81468.1| putative protein [Arabidopsis thaliana]
Length = 478
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 113 SKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRA----RRGQATDSHSLAERARREKISERM 168
KAE EP ++PA ++ R +R + + H+LAER RREKI+E+M
Sbjct: 216 CKAETEPVQIQPATESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKM 275
Query: 169 KILQDLVPGCNKV 181
K LQ L+P CNKV
Sbjct: 276 KTLQQLIPRCNKV 288
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
A+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK KA +L+E I Y++ LQ Q
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLEEAIEYLKMLQLQL 76
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 147 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK 206
G ATD S+ R RREKI+ER+K LQ LVP KV +LDE I+Y+Q LQ Q +K
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQVTLLK 59
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ Q
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQL 66
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 160 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVNTRMNPGIE 219
RR KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ Q +M + + + P ++
Sbjct: 225 RRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQHQVQAMSVGLASPAVYPVVQ 283
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 105 GSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 164
G+ + + A +P + PA + PK+ + + + D S+A R RRE+I
Sbjct: 8 GAMKEMMYRVAAMQPVDIDPATIHK-----PKRKNVRI------SDDPQSVAARLRRERI 56
Query: 165 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK 206
SE+++ILQ LVPG K + A +LDE I Y++ L+RQ S++
Sbjct: 57 SEKIRILQRLVPGGRK-MDTASMLDEAIRYVKFLKRQIRSLQ 97
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
D S+A R RRE+ISE+++ILQ LVPG K + A +LDE I Y++ L+RQ
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQI 168
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +LDE +
Sbjct: 190 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAV 242
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+ +R +A H+ +ER RR++I+++MK LQ LVP +K KA +LDE+I+Y++ LQ Q
Sbjct: 269 ISTKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIDYLKQLQAQ 327
Query: 202 F 202
Sbjct: 328 V 328
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q ++ +
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 150 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
+ H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ Q
Sbjct: 19 VEFHNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQIQL 70
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q ++ +
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q ++ +
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QFLSMK 206
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q LSM+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 144 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
ARR +A + H+L+ER RR++I+E+MK LQ L+P +K KA +L+E I Y++SLQ Q
Sbjct: 64 ARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKT-DKASMLEEAIEYLKSLQLQLQ 122
Query: 204 SMKL-EAVNTRMNPGIEVF 221
M + + M PGI+ +
Sbjct: 123 LMWMGSGMAPIMFPGIQHY 141
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QFLSM 205
+A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ Q L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 234
Query: 206 K 206
+
Sbjct: 235 R 235
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
+A R AT+S SL R RRE+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 210 AKADRRSATESQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQ 268
Query: 202 F 202
Sbjct: 269 I 269
>gi|312282875|dbj|BAJ34303.1| unnamed protein product [Thellungiella halophila]
Length = 615
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 132 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 191
P+ P+ V G T +H+ +ER RREK+++R L+ ++P +K I K +LD+
Sbjct: 409 PDTPEDSEFKV----GDETANHAFSERKRREKLNDRFMTLRSIIPSISK-IDKVSILDDT 463
Query: 192 INYIQSLQR--QFLSMKLEAVNTRMNPGIEVFPPKD 225
I Y+Q LQR Q L E+ NT + ++ P+D
Sbjct: 464 IEYLQELQRRVQELESCRESTNTEIRIAMKRKKPED 499
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QFLSM 205
+A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ Q L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 206 K 206
+
Sbjct: 256 R 256
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
RA+RG ATD S+ R RREKI+ER+K LQ LVP +V +L+E I++++ L+ Q
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQV-DIVTMLEEAIHFVKFLEFQL 529
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q ++ +
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYMKQLQLQVQTLAV 150
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 112 HSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKIL 171
+ A P ++ P + E P++ + + ++D ++A R RRE++SER+++L
Sbjct: 262 YRAAAMRPVNLGPEVIAAAAAEKPRRKNVRI------SSDPQTVAARLRRERVSERLRVL 315
Query: 172 QDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK 206
Q LVPG +K + A +LDE +Y++ L+ Q +++
Sbjct: 316 QKLVPGGSK-MDTASMLDEAASYLKFLKSQVQALE 349
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPP + + +R +A H+ +ER RR++I+++M+ LQ LVP +K KA +LDE+I
Sbjct: 245 EPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKT-DKASMLDEVI 303
Query: 193 NYIQSLQRQF 202
+++ LQ Q
Sbjct: 304 EHLKQLQAQV 313
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 149 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFL 203
+TD S+A R RR +IS+R KILQ LVPG K + +L+E INY++ L+ Q L
Sbjct: 38 STDPQSVAARERRHRISDRFKILQSLVPGGTK-MDTVSMLEEAINYVKFLKNQIL 91
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 105 GSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 164
G+ + + A +P + PA PK+ + + + D S+A R RRE+I
Sbjct: 92 GAMKEMMYKMAVMQPVDIDPASVRK-----PKRRNVRI------SDDPQSVAARHRRERI 140
Query: 165 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEA-----VNTRMNPGIE 219
SE+++ILQ LVPG K + A +LDE I Y++ L+RQ ++ N P E
Sbjct: 141 SEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRFLQSTPPPPINCNVGAAPNSE 199
Query: 220 V---FPPKDFTQQTFDTAGMPFVSQATREYSRGTSPDWLHMQ 258
F P T MP + S G + D +H++
Sbjct: 200 YYWPFAPNMLHSSTTTFIDMPVIGMEFNTRSHGHAGDSIHLR 241
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
++ G A D S+A + RRE+ISER+K+LQDLVP +KV +L++ I+Y++ LQ Q
Sbjct: 232 KSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKV-DLVTMLEKAISYVKFLQLQ 289
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q + L
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSL 169
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 105 GSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 164
G+ + + A +P + PA PK+ + + + D S+A R RRE+I
Sbjct: 99 GAMKEMMYKIAVMQPVDIDPAAIRK-----PKRKNVRI------SDDPQSVAARHRRERI 147
Query: 165 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
SE+++ILQ LVPG K + A +LDE I+Y++ L+RQ
Sbjct: 148 SEKIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKRQI 184
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 131 PPEPPKQDYIHVRARRGQ---ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 187
P P ++ + +R +R + D S+A R RRE+IS+R+++LQ VPG K + A +
Sbjct: 368 PNVPSMEEIVQLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTK-MDTASM 426
Query: 188 LDEIINYIQSLQRQFLSMK 206
LDE I+Y++ LQ+Q +++
Sbjct: 427 LDEAIHYVKFLQQQLQTLE 445
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
D S+A R RRE+ISER+++LQ LVPG K + A +LDE I YI+ L+RQ
Sbjct: 162 DPQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQV 212
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 142 VRAR-RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
VR R R H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ
Sbjct: 97 VRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQL 155
Query: 201 QFLSM 205
Q ++
Sbjct: 156 QVQAL 160
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
E PK+ + + +TD ++A R RRE+ISE++++LQ LVPG K + A +LDE
Sbjct: 266 EKPKRKNVKI------STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAA 318
Query: 193 NYIQSLQRQFLSM-----KLEAVNTRMNPGIEVFP 222
NY++ L+ Q ++ KL+ N + FP
Sbjct: 319 NYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFP 353
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 133 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 192
EPP + + +R +A H+ +ER RR++I+++M+ LQ LVP +K KA +LDE+I
Sbjct: 245 EPPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKT-DKASMLDEVI 303
Query: 193 NYIQSLQRQF 202
+++ LQ Q
Sbjct: 304 EHLKQLQAQV 313
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK 206
D S+A R RRE+ISER+++LQ LVPG K + A +LDE I YI+ L+RQ ++
Sbjct: 162 DPQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQELQ 216
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMK 206
D S+A R RRE+ISER+++LQ LVPG K + A +LDE I YI+ L+RQ ++
Sbjct: 161 DPQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQELQ 215
>gi|297742516|emb|CBI34665.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
R + T +H L+ER RREKI+ER +L+ LVP N+V K VLD+ I Y++ L+R+
Sbjct: 335 RPEADEITLNHVLSERKRREKINERFSVLRSLVPSINQV-NKVSVLDDTIEYLKELKRRV 393
Query: 203 -------LSMKLEAVNTRMNP 216
S ++EA +R P
Sbjct: 394 EELESSKESTEIEARTSRRTP 414
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKL 207
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ Q ++ +
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 150
>gi|217074640|gb|ACJ85680.1| unknown [Medicago truncatula]
gi|388490634|gb|AFK33383.1| unknown [Medicago truncatula]
Length = 335
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 145 RRGQATDS-------HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 197
+ G+ATD HS+ E+ RR KI+ER +IL+DL+P C++ A L E+I Y+Q
Sbjct: 34 KDGKATDKASVIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQY 93
Query: 198 LQ 199
LQ
Sbjct: 94 LQ 95
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QFLSMK 206
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q LSM+
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 199
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 132 PEPPKQDYIHVRARRGQ---ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 188
P P ++ R +R + D S+A R RRE+IS+R+++LQ LVPG K + A +L
Sbjct: 419 PVPSLEEIASSRPKRRNVRISKDPQSVAARHRRERISDRIRVLQRLVPGGTK-MDTASML 477
Query: 189 DEIINYIQSLQRQFLSMKLEAVNTRMNPGIEVFPPKDFTQQ 229
DE I+Y+ +FL ++L+ + N G + P+ F +Q
Sbjct: 478 DEAIHYV-----KFLKLQLQTLEQIGNNGCD---PRSFLEQ 510
>gi|406862693|gb|EKD15742.1| helix-loop-helix DNA-binding domain-containing protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 382
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 152 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQFLSMKLEAVN 211
+HSL ER RR K++E IL+D++P C + K +L I+Y++ L+ +K E
Sbjct: 161 AHSLIERRRRSKMNEEFGILKDMIPACTGEMHKLAILQASIDYVRYLEDCVAKLKAENNR 220
Query: 212 TRMNPGIE--VFPP 223
T P E V PP
Sbjct: 221 TNATPTAEDSVLPP 234
>gi|357488103|ref|XP_003614339.1| Transcription factor BIM2 [Medicago truncatula]
gi|355515674|gb|AES97297.1| Transcription factor BIM2 [Medicago truncatula]
Length = 335
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 145 RRGQATDS-------HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 197
+ G+ATD HS+ E+ RR KI+ER +IL+DL+P C++ A L E+I Y+Q
Sbjct: 34 KDGKATDKASVIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQY 93
Query: 198 LQ 199
LQ
Sbjct: 94 LQ 95
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QFLSM 205
+A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ Q L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 206 K 206
+
Sbjct: 256 R 256
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 153 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR--QFLSMK 206
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q L+M+
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTMR 182
>gi|359474203|ref|XP_002270239.2| PREDICTED: transcription factor GLABRA 3-like [Vitis vinifera]
Length = 633
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Query: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
R + T +H L+ER RREKI+ER +L+ LVP N+V K VLD+ I Y++ L+R+
Sbjct: 425 RPEADEITLNHVLSERKRREKINERFSVLRSLVPSINQV-NKVSVLDDTIEYLKELKRRV 483
Query: 203 -------LSMKLEAVNTRMNP 216
S ++EA +R P
Sbjct: 484 EELESSKESTEIEARTSRRTP 504
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 105 GSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 164
G+ + + A +P + PA PK+ + + + D S+A R RRE+I
Sbjct: 111 GAMKEMMYKIAAMQPVDIDPATIRK-----PKRRNVRI------SDDPQSVAARHRRERI 159
Query: 165 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQF 202
SE+++ILQ LVPG K + A +LDE I Y++ L+RQ
Sbjct: 160 SEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQI 196
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.130 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,536,664,673
Number of Sequences: 23463169
Number of extensions: 197862610
Number of successful extensions: 630544
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 2188
Number of HSP's that attempted gapping in prelim test: 626475
Number of HSP's gapped (non-prelim): 4784
length of query: 267
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 127
effective length of database: 9,074,351,707
effective search space: 1152442666789
effective search space used: 1152442666789
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 75 (33.5 bits)