Query 024465
Match_columns 267
No_of_seqs 177 out of 1469
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 08:42:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024465.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024465hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 8.4E-19 2.9E-23 150.6 14.6 156 72-256 4-162 (195)
2 1u8s_A Glycine cleavage system 99.8 8.9E-17 3E-21 137.1 20.2 155 73-256 6-165 (192)
3 3p96_A Phosphoserine phosphata 98.9 2.4E-07 8.1E-12 86.9 21.8 138 72-235 11-149 (415)
4 2f06_A Conserved hypothetical 98.6 2.8E-06 9.5E-11 68.4 15.2 112 74-234 7-118 (144)
5 2nyi_A Unknown protein; protei 98.2 1.9E-06 6.6E-11 73.3 6.9 73 69-145 89-163 (195)
6 1zpv_A ACT domain protein; str 98.2 1.3E-05 4.4E-10 59.1 9.9 65 72-143 4-68 (91)
7 1zpv_A ACT domain protein; str 98.1 2.6E-05 8.8E-10 57.5 10.0 47 188-234 5-51 (91)
8 1u8s_A Glycine cleavage system 98.0 2.3E-05 7.9E-10 66.0 9.7 65 188-257 6-70 (192)
9 2ko1_A CTR148A, GTP pyrophosph 98.0 3.5E-05 1.2E-09 56.0 9.0 63 188-254 5-67 (88)
10 2ko1_A CTR148A, GTP pyrophosph 97.8 0.00015 5E-09 52.7 9.1 62 73-141 5-66 (88)
11 2re1_A Aspartokinase, alpha an 97.6 0.00078 2.7E-08 55.5 12.4 111 71-220 23-138 (167)
12 2dtj_A Aspartokinase; protein- 97.3 0.0041 1.4E-07 51.7 13.2 112 70-220 12-130 (178)
13 2dt9_A Aspartokinase; protein- 97.3 0.0024 8.3E-08 52.4 11.0 138 70-258 13-157 (167)
14 3o1l_A Formyltetrahydrofolate 97.3 0.0014 4.7E-08 59.5 10.1 39 72-110 21-59 (302)
15 2f1f_A Acetolactate synthase i 97.2 0.00094 3.2E-08 55.5 7.9 65 188-257 3-69 (164)
16 3n0v_A Formyltetrahydrofolate 97.2 0.013 4.3E-07 52.7 15.6 38 73-110 8-45 (286)
17 3obi_A Formyltetrahydrofolate 97.2 0.024 8.2E-07 50.9 17.2 38 73-110 6-43 (288)
18 3lou_A Formyltetrahydrofolate 97.1 0.00056 1.9E-08 61.8 6.2 47 187-235 9-55 (292)
19 3nrb_A Formyltetrahydrofolate 97.1 0.0012 4.1E-08 59.5 7.4 39 72-110 6-44 (287)
20 3o1l_A Formyltetrahydrofolate 97.0 0.0023 7.8E-08 58.1 9.2 48 186-235 20-67 (302)
21 2pc6_A Probable acetolactate s 97.0 0.0016 5.3E-08 54.2 7.1 65 188-257 4-70 (165)
22 2jhe_A Transcription regulator 97.0 0.003 1E-07 51.1 8.8 36 190-225 2-37 (190)
23 3nrb_A Formyltetrahydrofolate 97.0 0.00087 3E-08 60.4 5.6 47 187-235 6-52 (287)
24 3lou_A Formyltetrahydrofolate 96.9 0.0016 5.5E-08 58.8 7.3 39 72-110 9-47 (292)
25 3obi_A Formyltetrahydrofolate 96.9 0.0062 2.1E-07 54.8 10.4 36 188-223 6-41 (288)
26 2f1f_A Acetolactate synthase i 96.8 0.0052 1.8E-07 50.9 8.9 62 74-143 4-67 (164)
27 3n0v_A Formyltetrahydrofolate 96.7 0.0085 2.9E-07 53.9 10.2 47 187-235 7-53 (286)
28 3p96_A Phosphoserine phosphata 96.7 0.0016 5.3E-08 60.7 5.6 41 187-227 11-51 (415)
29 3s1t_A Aspartokinase; ACT doma 96.6 0.082 2.8E-06 44.0 14.8 111 71-220 14-131 (181)
30 2fgc_A Acetolactate synthase, 96.5 0.0065 2.2E-07 51.7 7.2 65 188-257 29-95 (193)
31 2jhe_A Transcription regulator 96.4 0.014 4.9E-07 47.0 8.9 59 75-143 2-60 (190)
32 2pc6_A Probable acetolactate s 96.3 0.0097 3.3E-07 49.3 7.3 62 74-143 5-68 (165)
33 1y7p_A Hypothetical protein AF 96.2 0.0078 2.7E-07 52.1 6.5 38 188-225 4-41 (223)
34 4go7_X Aspartokinase; transfer 96.2 0.023 7.9E-07 48.4 9.3 124 56-220 19-150 (200)
35 3ab4_A Aspartokinase; aspartat 95.9 0.15 5E-06 47.9 14.0 110 71-219 262-378 (421)
36 1y7p_A Hypothetical protein AF 95.5 0.025 8.6E-07 48.9 6.4 37 74-110 5-41 (223)
37 2fgc_A Acetolactate synthase, 95.2 0.07 2.4E-06 45.2 8.2 63 73-143 29-93 (193)
38 1sc6_A PGDH, D-3-phosphoglycer 95.1 0.045 1.5E-06 51.4 7.3 48 187-234 330-377 (404)
39 2f06_A Conserved hypothetical 95.0 0.078 2.7E-06 41.9 7.5 36 188-223 6-41 (144)
40 2qmx_A Prephenate dehydratase; 94.4 0.13 4.4E-06 46.1 8.2 55 188-242 200-255 (283)
41 1ygy_A PGDH, D-3-phosphoglycer 94.1 0.24 8.2E-06 47.9 10.1 62 187-251 453-516 (529)
42 3luy_A Probable chorismate mut 93.9 0.44 1.5E-05 43.5 10.9 58 188-245 206-266 (329)
43 3c1m_A Probable aspartokinase; 93.6 0.75 2.6E-05 43.8 12.5 126 71-234 316-451 (473)
44 3mwb_A Prephenate dehydratase; 93.6 0.19 6.6E-06 45.6 8.0 54 188-241 201-256 (313)
45 2qmw_A PDT, prephenate dehydra 93.3 0.31 1.1E-05 43.2 8.6 66 187-254 185-254 (267)
46 3l76_A Aspartokinase; alloster 93.1 1.8 6.1E-05 42.5 14.5 139 70-258 441-589 (600)
47 3l76_A Aspartokinase; alloster 91.8 2.4 8.1E-05 41.6 13.5 123 71-222 353-479 (600)
48 3tvi_A Aspartokinase; structur 90.8 1.5 5.3E-05 41.4 10.7 108 71-220 296-409 (446)
49 3k5p_A D-3-phosphoglycerate de 88.9 1.4 4.7E-05 41.5 8.5 48 187-234 342-389 (416)
50 1sc6_A PGDH, D-3-phosphoglycer 88.3 1.3 4.3E-05 41.4 7.9 48 72-119 330-377 (404)
51 1phz_A Protein (phenylalanine 87.8 0.84 2.9E-05 43.1 6.3 68 187-256 33-101 (429)
52 1ygy_A PGDH, D-3-phosphoglycer 87.5 2.9 0.0001 40.1 10.1 42 71-112 452-493 (529)
53 2cdq_A Aspartokinase; aspartat 87.3 3.8 0.00013 39.4 10.7 121 71-234 339-466 (510)
54 3mtj_A Homoserine dehydrogenas 85.9 0.81 2.8E-05 43.4 5.1 35 187-221 358-392 (444)
55 2re1_A Aspartokinase, alpha an 84.2 4 0.00014 32.8 8.0 34 71-104 101-137 (167)
56 2qmx_A Prephenate dehydratase; 80.0 17 0.00059 32.1 11.1 64 73-143 200-264 (283)
57 3k5p_A D-3-phosphoglycerate de 76.6 8.1 0.00028 36.2 8.2 56 57-114 329-384 (416)
58 3mwb_A Prephenate dehydratase; 76.6 21 0.00072 32.1 10.7 53 72-126 200-254 (313)
59 3mah_A Aspartokinase; aspartat 76.3 1.9 6.6E-05 34.4 3.4 111 71-234 16-133 (157)
60 2dtj_A Aspartokinase; protein- 75.6 6.4 0.00022 32.0 6.5 38 187-224 14-52 (178)
61 2dt9_A Aspartokinase; protein- 72.3 16 0.00055 29.1 8.1 34 71-104 93-129 (167)
62 3luy_A Probable chorismate mut 72.0 44 0.0015 30.2 11.7 54 72-127 205-261 (329)
63 1ib8_A Conserved protein SP14. 66.2 39 0.0013 27.2 9.2 56 86-146 14-69 (164)
64 4go7_X Aspartokinase; transfer 64.5 5.9 0.0002 33.3 4.0 49 187-235 34-86 (200)
65 2qmw_A PDT, prephenate dehydra 63.6 38 0.0013 29.6 9.2 50 72-121 185-238 (267)
66 3s1t_A Aspartokinase; ACT doma 63.5 24 0.00082 28.8 7.5 47 71-121 94-143 (181)
67 3mtj_A Homoserine dehydrogenas 63.1 15 0.00052 34.6 6.9 51 72-122 358-410 (444)
68 1rwu_A Hypothetical UPF0250 pr 60.0 53 0.0018 24.8 8.9 63 71-141 34-99 (109)
69 3ab4_A Aspartokinase; aspartat 46.4 48 0.0016 30.5 7.3 48 188-235 264-315 (421)
70 3g12_A Putative lactoylglutath 41.6 87 0.003 22.8 7.0 47 188-241 67-115 (128)
71 3mah_A Aspartokinase; aspartat 39.1 23 0.00079 27.9 3.4 34 187-220 17-53 (157)
72 1phz_A Protein (phenylalanine 38.1 36 0.0012 32.0 4.9 51 71-121 32-83 (429)
73 3g12_A Putative lactoylglutath 37.3 93 0.0032 22.7 6.5 50 71-128 65-115 (128)
74 4esb_A Transcriptional regulat 34.0 45 0.0015 24.9 4.2 65 198-263 41-108 (115)
75 2j0w_A Lysine-sensitive aspart 30.4 43 0.0015 31.3 4.2 119 71-234 306-431 (449)
76 2l48_A N-acetylmuramoyl-L-alan 28.8 1.6E+02 0.0056 21.2 6.8 56 76-142 21-76 (85)
77 3r6a_A Uncharacterized protein 26.9 1.4E+02 0.0049 22.3 6.1 46 189-241 67-113 (144)
78 1zhv_A Hypothetical protein AT 25.5 34 0.0012 26.8 2.2 29 190-218 64-95 (134)
79 3dhx_A Methionine import ATP-b 24.2 2.1E+02 0.0071 20.8 6.8 49 86-141 37-85 (106)
80 1zvp_A Hypothetical protein VC 24.1 40 0.0014 26.4 2.3 25 194-218 80-104 (133)
81 3c1m_A Probable aspartokinase; 23.5 83 0.0028 29.5 4.8 48 187-236 317-367 (473)
82 3kol_A Oxidoreductase, glyoxal 23.1 1.2E+02 0.0042 22.0 5.0 37 202-241 109-146 (156)
83 3tvi_A Aspartokinase; structur 22.0 2.1E+02 0.0073 26.6 7.3 49 71-121 372-423 (446)
84 2yh5_A DAPX protein, BAMC; lip 21.2 1.3E+02 0.0043 23.1 4.7 68 188-260 50-120 (127)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.80 E-value=8.4e-19 Score=150.59 Aligned_cols=156 Identities=14% Similarity=0.180 Sum_probs=113.4
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhhccCCC
Q 024465 72 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPE 151 (267)
Q Consensus 72 ~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~~~~~~ 151 (267)
..++|+|+|+|||||++.|+++|+++|+||.+|++++..+++.-.|.+... +. ..+.++++|++.|...+.....
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~--~~--~~~~~~~~l~~~L~~~~~~~~~- 78 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLN--AK--DGKLIQSALESALPGFQISTRR- 78 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SS--SSHHHHHHHHHHSTTCEEEEEE-
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEec--Cc--cchhHHHHHHHHHHHHHHhcCC-
Confidence 457999999999999999999999999999999999999888667777653 21 2234567777775543321100
Q ss_pred chhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecC--Ceee
Q 024465 152 SSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG--LVAK 229 (267)
Q Consensus 152 ~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g--~~a~ 229 (267)
....+ . .+ .......++|+|.|+|||||+++|+++|+++|+||..++..|.+ +++.
T Consensus 79 -------------~~~~~--~---~~----~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~ 136 (195)
T 2nyi_A 79 -------------ASSVA--E---RH----VSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGF 136 (195)
T ss_dssp -------------CCCC-------------CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTC
T ss_pred -------------eEEEE--e---CC----cCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCC
Confidence 00001 0 01 12223478999999999999999999999999999999999998 7788
Q ss_pred eEEEEEe-CCCCCChHHHHHHHHHHHHH
Q 024465 230 DKFHVSY-GGAALNSSLSQVLVNCLRYY 256 (267)
Q Consensus 230 d~F~v~d-~G~~l~~~~~~~L~~~L~~~ 256 (267)
+.|+++. .+.+ .... +.|+++|...
T Consensus 137 ~~F~m~~~~~~~-~~~~-~~l~~~l~~~ 162 (195)
T 2nyi_A 137 TLFRMGSRVAFP-FPLY-QEVVTALSRV 162 (195)
T ss_dssp EEEEEEEEEEEE-GGGH-HHHHHHHHHH
T ss_pred CeEEEEEEEEcC-CCcc-HHHHHHHHHH
Confidence 9999986 4433 1224 6666666644
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.76 E-value=8.9e-17 Score=137.05 Aligned_cols=155 Identities=13% Similarity=0.159 Sum_probs=109.8
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhhccCCCc
Q 024465 73 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPES 152 (267)
Q Consensus 73 ~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~~~~~~~ 152 (267)
..+|+|.|+||||++++++++|+++|+||.++++++.++++.-.|.+... ...+++|++.|...+......
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~--------~~~~~~l~~~L~~~~~~~~~~- 76 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS--------PSNITRVETTLPLLGQQHDLI- 76 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC--------HHHHHHHHHHHHHHHHHHTCE-
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC--------CCCHHHHHHHHHHHHHhcCCE-
Confidence 46899999999999999999999999999999999988888767777542 246778888887654321110
Q ss_pred hhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCC----ee
Q 024465 153 SEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGL----VA 228 (267)
Q Consensus 153 ~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~----~a 228 (267)
..+ . +..+ ++ .......++|.+.|+||||++++|+++|+++|+||..++..|.+. +.
T Consensus 77 -~~~-----~--~~~~-------~~----~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~ 137 (192)
T 1u8s_A 77 -TMM-----K--RTSP-------HD----HQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSE 137 (192)
T ss_dssp -EEE-----E--EECC-------CC----CCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC-------
T ss_pred -EEE-----E--eCCC-------CC----CccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCC
Confidence 000 0 0000 00 111224789999999999999999999999999999999999984 68
Q ss_pred eeEEEEEe-CCCCCChHHHHHHHHHHHHH
Q 024465 229 KDKFHVSY-GGAALNSSLSQVLVNCLRYY 256 (267)
Q Consensus 229 ~d~F~v~d-~G~~l~~~~~~~L~~~L~~~ 256 (267)
.+.|+++. .+.+ .....+.|+++|...
T Consensus 138 ~~~F~~~~~~~~~-~~~~~~~l~~~l~~~ 165 (192)
T 1u8s_A 138 QNQFHIAISARVD-SGCNLMQLQEEFDAL 165 (192)
T ss_dssp -CEEEEEEEEEEC-TTSCHHHHHHHHHHH
T ss_pred CCEEEEEEEEeCC-CCCCHHHHHHHHHHH
Confidence 89999986 3322 111345566665543
No 3
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.90 E-value=2.4e-07 Score=86.86 Aligned_cols=138 Identities=9% Similarity=0.067 Sum_probs=90.8
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhhccCCC
Q 024465 72 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPE 151 (267)
Q Consensus 72 ~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~~~~~~ 151 (267)
...+|+|.|+||||+.+.+++.|+++|+||.+.+.+..++.+.-...+.-. ++. ...+.|++.|...-.....
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~-~~~-----~~~~~l~~~l~~~~~~~~~- 83 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCP-ADV-----ADGPALRHDVEAAIRKVGL- 83 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEEC-HHH-----HTSHHHHHHHHHHHHHTTC-
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEec-CCc-----CCHHHHHHHHHHHHHHcCe-
Confidence 356899999999999999999999999999999999888766433333221 110 0225667776552221111
Q ss_pred chhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeCC-cccHHHHHHHHHHhCCccEEEEEEEecCCeeee
Q 024465 152 SSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETAD-RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKD 230 (267)
Q Consensus 152 ~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~D-RpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d 230 (267)
.-.+. +... .+ ......++.+.+.+.| ++|++.+|+.+|+++|+||.....-+......-
T Consensus 84 -~~~~~-------~~~~-------~~----~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~ 144 (415)
T 3p96_A 84 -DVSIE-------RSDD-------VP----IIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGL 144 (415)
T ss_dssp -EEEEE-------ECSS-------SC----SSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEE
T ss_pred -EEEEE-------ECCc-------cc----ccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEE
Confidence 00000 0000 00 0012347889999999 999999999999999999999887774333333
Q ss_pred EEEEE
Q 024465 231 KFHVS 235 (267)
Q Consensus 231 ~F~v~ 235 (267)
-|++.
T Consensus 145 ~~~v~ 149 (415)
T 3p96_A 145 ELRVS 149 (415)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 36663
No 4
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.56 E-value=2.8e-06 Score=68.39 Aligned_cols=112 Identities=13% Similarity=0.184 Sum_probs=75.2
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhhccCCCch
Q 024465 74 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPESS 153 (267)
Q Consensus 74 t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~~~~~~~~ 153 (267)
..++|..+|+||.++++++.|.+.|+||..-.+....+...-.|.+. ++ ++.++.|++ . + . .
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~---------d~---~~a~~~L~~-~-G--~--~ 68 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVS---------DP---DKAYKALKD-N-H--F--A 68 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES---------CH---HHHHHHHHH-T-T--C--C
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC---------CH---HHHHHHHHH-c-C--C--e
Confidence 47888999999999999999999999999887765444222123221 22 233344332 1 1 0 0
Q ss_pred hHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEE
Q 024465 154 EQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFH 233 (267)
Q Consensus 154 ~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~ 233 (267)
+ ....++-+..+|+||.+++|+++|+++|+||.+......+.++.-+|.
T Consensus 69 ---------------------------v----~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~ 117 (144)
T 2f06_A 69 ---------------------------V----NITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIR 117 (144)
T ss_dssp ---------------------------E----EEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEE
T ss_pred ---------------------------E----eeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEE
Confidence 0 012456677889999999999999999999987765533455544444
Q ss_pred E
Q 024465 234 V 234 (267)
Q Consensus 234 v 234 (267)
+
T Consensus 118 ~ 118 (144)
T 2f06_A 118 P 118 (144)
T ss_dssp E
T ss_pred e
Confidence 4
No 5
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=98.22 E-value=1.9e-06 Score=73.25 Aligned_cols=73 Identities=11% Similarity=0.002 Sum_probs=54.9
Q ss_pred CCCCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC--CeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHh
Q 024465 69 SNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNL 145 (267)
Q Consensus 69 ~~~~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~--~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L 145 (267)
.....++|+|.|+||||++++|+++|+++|+||.+++.++.+ ....+.|+++.. -+.+ +... +.|++.|....
T Consensus 89 ~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~-~~~~--~~~~-~~l~~~l~~~a 163 (195)
T 2nyi_A 89 PDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSR-VAFP--FPLY-QEVVTALSRVE 163 (195)
T ss_dssp TTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEE-EEEE--GGGH-HHHHHHHHHHH
T ss_pred CCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEE-EEcC--CCcc-HHHHHHHHHHH
Confidence 345668999999999999999999999999999999999987 333466776653 2221 2234 77777776643
No 6
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.18 E-value=1.3e-05 Score=59.14 Aligned_cols=65 Identities=11% Similarity=0.112 Sum_probs=50.0
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 024465 72 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 143 (267)
Q Consensus 72 ~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~ 143 (267)
....++|.|+||||++++++.+|+++|+||.+....+..+.+.-.+.+.-. +. ..++.|.+.|..
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~~-----~~l~~l~~~L~~ 68 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--EK-----QDFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SC-----CCHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--CC-----CCHHHHHHHHHH
Confidence 346899999999999999999999999999999999887655555555432 21 235667777665
No 7
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.10 E-value=2.6e-05 Score=57.48 Aligned_cols=47 Identities=11% Similarity=0.208 Sum_probs=40.2
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEE
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 234 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v 234 (267)
.+.|.+.+.||||+|++|+++|+++|+||.+....+.++...-.+.+
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v 51 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVV 51 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEE
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEE
Confidence 57899999999999999999999999999999998876554444444
No 8
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.03 E-value=2.3e-05 Score=65.99 Aligned_cols=65 Identities=15% Similarity=0.174 Sum_probs=50.7
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHHHc
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYL 257 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v~d~G~~l~~~~~~~L~~~L~~~l 257 (267)
.+.|.|.|+||||+++.|+.+|+++|+||..+++.+.++.-.-.|.+... ....++|++.|....
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~-----~~~~~~l~~~L~~~~ 70 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS-----PSNITRVETTLPLLG 70 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC-----HHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC-----CCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999998877665556777532 124456666665443
No 9
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.00 E-value=3.5e-05 Score=56.05 Aligned_cols=63 Identities=13% Similarity=0.214 Sum_probs=46.5
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHH
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLR 254 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v~d~G~~l~~~~~~~L~~~L~ 254 (267)
.+.|.+.+.||||+|++|+++|++.|+||.++.+.+.++.+...|.+.-.+ ...++++.+.|.
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~~----~~~l~~l~~~L~ 67 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKN----TDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEESS----HHHHHHHHHHHT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEECC----HHHHHHHHHHHh
Confidence 567889999999999999999999999999999988766444555443221 224455555543
No 10
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.78 E-value=0.00015 Score=52.66 Aligned_cols=62 Identities=10% Similarity=0.132 Sum_probs=46.0
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHH
Q 024465 73 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTI 141 (267)
Q Consensus 73 ~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L 141 (267)
.+.+.|.+.||||+|++++.+|++.|+||....+.+.++.+...|.+.-. +.+.++++.+.|
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-------~~~~l~~l~~~L 66 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-------NTDKLTTLMDKL 66 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-------SHHHHHHHHHHH
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-------CHHHHHHHHHHH
Confidence 35788999999999999999999999999999998876633344444331 235556565554
No 11
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.63 E-value=0.00078 Score=55.52 Aligned_cols=111 Identities=11% Similarity=0.126 Sum_probs=74.5
Q ss_pred CCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEcCCe-eEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhhcc
Q 024465 71 SDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEGSV-KQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKY 148 (267)
Q Consensus 71 ~~~t~V~V~-~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~-~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~~~ 148 (267)
++.+.|+|. ..|+||.++++...|.+.|+||..-......++ ..-.|.|... ..++..+.|.+....
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~----------~~~~a~~~l~~~~~~- 91 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG----------DYKQTLEILSERQDS- 91 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG----------GHHHHHHHHHHSSTT-
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech----------HHHHHHHHHHHHHHH-
Confidence 477899999 499999999999999999999998765433333 2344666431 123334444442111
Q ss_pred CCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeCC---cccHHHHHHHHHHhCCccEEEEE
Q 024465 149 HPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETAD---RPGLLVEIMKIIADVNVDVESAE 220 (267)
Q Consensus 149 ~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~D---RpGLL~~Itr~l~~~gl~I~~a~ 220 (267)
.. + ..+.+. .+...+.+.+.+ +||+++++.++|+++|+||....
T Consensus 92 -l~---------------------~---~~i~~~---~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is 138 (167)
T 2re1_A 92 -IG---------------------A---ASIDGD---DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS 138 (167)
T ss_dssp -TT---------------------C---SEEEEE---SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE
T ss_pred -cC---------------------C---ceEEec---CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE
Confidence 00 0 012222 247888998887 99999999999999999999843
No 12
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.34 E-value=0.0041 Score=51.73 Aligned_cols=112 Identities=20% Similarity=0.249 Sum_probs=74.4
Q ss_pred CCCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEcC--C-eeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHh
Q 024465 70 NSDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEG--S-VKQTKFFITRLDTGRKVEDPDLLERIRLTIINNL 145 (267)
Q Consensus 70 ~~~~t~V~V~-~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~--~-~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L 145 (267)
.++.+.|+|. ..|+||.++++...|.+.|+||..-...+.. + ...-.|.+.. +..++..+.|.+ +
T Consensus 12 ~~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~----------~d~~~a~~~l~~-~ 80 (178)
T 2dtj_A 12 DKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR----------SDGRRAMEILKK-L 80 (178)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH----------HHHHHHHHHHHT-T
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc----------ccHHHHHHHHHH-H
Confidence 3577888884 6999999999999999999999876655432 2 2222365543 223344444433 2
Q ss_pred hccCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCccEEEEE
Q 024465 146 LKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 220 (267)
Q Consensus 146 ~~~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~---DRpGLL~~Itr~l~~~gl~I~~a~ 220 (267)
... . .+ ..+.+. .+...|.+.+. ++||+++++.++|++.|+||....
T Consensus 81 ~~~-~---------------------~~---~~v~~~---~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is 130 (178)
T 2dtj_A 81 QVQ-G---------------------NW---TNVLYD---DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 130 (178)
T ss_dssp TTT-T---------------------TC---SEEEEE---SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHh-c---------------------CC---CeEEEe---CCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 110 0 00 112222 24677788776 899999999999999999998853
No 13
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.27 E-value=0.0024 Score=52.43 Aligned_cols=138 Identities=14% Similarity=0.184 Sum_probs=85.4
Q ss_pred CCCeEEEEEEe-CCCccHHHHHHHHHHHCCceEEEEEEEEcC--Ce-eEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHh
Q 024465 70 NSDATIVQLSF-GDRLGALIDTMNALKDLGLDVAKGTVNTEG--SV-KQTKFFITRLDTGRKVEDPDLLERIRLTIINNL 145 (267)
Q Consensus 70 ~~~~t~V~V~~-~DRpGLL~di~~~L~~~~lnI~~A~I~T~~--~~-~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L 145 (267)
.++.+.|+|.+ +|+||.++++..+|.+.|+||..-...... .+ ..-.|.|... ..++..+.|.+..
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~----------d~~~a~~~L~~~~ 82 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD----------FAQEALEALEPVL 82 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG----------GHHHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH----------HHHHHHHHHHHHH
Confidence 45788888886 899999999999999999999875543221 22 2345777542 1122333333321
Q ss_pred hccCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeCC---cccHHHHHHHHHHhCCccEEEEEEE
Q 024465 146 LKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETAD---RPGLLVEIMKIIADVNVDVESAEID 222 (267)
Q Consensus 146 ~~~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~D---RpGLL~~Itr~l~~~gl~I~~a~i~ 222 (267)
.. + .+ .+.++ .+...+.+.+.+ +||.++++.++|++.|+||....
T Consensus 83 ~~--------~---------------~~----~v~~~---~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is-- 130 (167)
T 2dt9_A 83 AE--------I---------------GG----EAILR---PDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIA-- 130 (167)
T ss_dssp HH--------H---------------CC----EEEEE---CSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE--
T ss_pred HH--------h---------------CC----cEEEe---CCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE--
Confidence 11 0 00 12222 257888898886 99999999999999999995543
Q ss_pred ecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHHHcC
Q 024465 223 TEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYLR 258 (267)
Q Consensus 223 T~g~~a~d~F~v~d~G~~l~~~~~~~L~~~L~~~l~ 258 (267)
|. +. .-.|.|.. +..+...++|+....
T Consensus 131 ~S-e~-~is~vv~~-------~d~~~Av~~Lh~~f~ 157 (167)
T 2dt9_A 131 TS-EV-RISVIIPA-------EYAEAALRAVHQAFE 157 (167)
T ss_dssp EC-SS-EEEEEEEG-------GGHHHHHHHHHHHTC
T ss_pred cc-CC-EEEEEEeH-------HHHHHHHHHHHHHHc
Confidence 33 22 44555632 123344455555544
No 14
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.26 E-value=0.0014 Score=59.54 Aligned_cols=39 Identities=13% Similarity=0.171 Sum_probs=36.0
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC
Q 024465 72 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 110 (267)
Q Consensus 72 ~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~ 110 (267)
...+++|.|+||||+.+.++..|+++|+||.+.+.++..
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~ 59 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDN 59 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEET
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecC
Confidence 446899999999999999999999999999999999763
No 15
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.22 E-value=0.00094 Score=55.46 Aligned_cols=65 Identities=12% Similarity=0.274 Sum_probs=50.1
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecC--CeeeeEEEEEeCCCCCChHHHHHHHHHHHHHc
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG--LVAKDKFHVSYGGAALNSSLSQVLVNCLRYYL 257 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g--~~a~d~F~v~d~G~~l~~~~~~~L~~~L~~~l 257 (267)
...|.+...||||+|++|+++|++.|+||.+..+.+.. +...-+|.+. |. +..+++|.+.|.+..
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~--~d---~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV--GD---EKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE--SC---HHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe--cc---HHHHHHHHHHHcCCC
Confidence 35788999999999999999999999999999997544 3455555663 32 447788888877654
No 16
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.19 E-value=0.013 Score=52.74 Aligned_cols=38 Identities=13% Similarity=0.003 Sum_probs=35.1
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC
Q 024465 73 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 110 (267)
Q Consensus 73 ~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~ 110 (267)
..+++|.|+||||+.+.++..|+++|+||.+.+.++..
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~ 45 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDR 45 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEET
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccC
Confidence 36899999999999999999999999999999999643
No 17
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.17 E-value=0.024 Score=50.94 Aligned_cols=38 Identities=18% Similarity=0.237 Sum_probs=34.9
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC
Q 024465 73 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 110 (267)
Q Consensus 73 ~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~ 110 (267)
..+++|.|+||||+.+.++..|+++|+||.+.+.+++.
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~ 43 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDT 43 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEET
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecC
Confidence 36899999999999999999999999999999998543
No 18
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.14 E-value=0.00056 Score=61.81 Aligned_cols=47 Identities=11% Similarity=0.229 Sum_probs=38.5
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEEE
Q 024465 187 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 235 (267)
Q Consensus 187 ~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v~ 235 (267)
..++|.+.|+|||||++.||++|+++|+||..+.-.+. ...+.|+.+
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d--~~~g~Ffmr 55 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDD--DLSARFFVR 55 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEE--TTTTEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEec--CCCCceEEE
Confidence 36789999999999999999999999999999887653 233455554
No 19
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.05 E-value=0.0012 Score=59.48 Aligned_cols=39 Identities=13% Similarity=0.221 Sum_probs=35.6
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC
Q 024465 72 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 110 (267)
Q Consensus 72 ~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~ 110 (267)
...+++|.|+||||+.+.++..|+++|+||.+.+.+++.
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~ 44 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDE 44 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEET
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecC
Confidence 456899999999999999999999999999999998543
No 20
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.04 E-value=0.0023 Score=58.10 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=39.1
Q ss_pred CCeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEEE
Q 024465 186 PKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 235 (267)
Q Consensus 186 s~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v~ 235 (267)
...++|.+.|+|||||++.||++|+++|+||..+.-.+.. ..+.|+.+
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~--~~g~FfMr 67 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDN--LSGWFFMR 67 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEET--TTTEEEEE
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecC--CCCeEEEE
Confidence 3578999999999999999999999999999998876542 23345554
No 21
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.99 E-value=0.0016 Score=54.18 Aligned_cols=65 Identities=11% Similarity=0.272 Sum_probs=50.1
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecC--CeeeeEEEEEeCCCCCChHHHHHHHHHHHHHc
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG--LVAKDKFHVSYGGAALNSSLSQVLVNCLRYYL 257 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g--~~a~d~F~v~d~G~~l~~~~~~~L~~~L~~~l 257 (267)
...|.+...|+||+|++|+++|++.|+||.+..+.+.. +...-+|.+. |. +..+++|.+.|.+..
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~--~d---~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN--GP---DEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE--EC---HHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe--cc---HHHHHHHHHHhcCCC
Confidence 45788999999999999999999999999999986443 4455556663 22 446788888877654
No 22
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.99 E-value=0.003 Score=51.10 Aligned_cols=36 Identities=31% Similarity=0.445 Sum_probs=33.4
Q ss_pred EEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecC
Q 024465 190 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG 225 (267)
Q Consensus 190 ~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g 225 (267)
.|+|.|.||+|||++|+++|+++++||..+.+.+.|
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g 37 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIG 37 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCC
Confidence 478999999999999999999999999999997763
No 23
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=96.96 E-value=0.00087 Score=60.41 Aligned_cols=47 Identities=19% Similarity=0.370 Sum_probs=38.5
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEEE
Q 024465 187 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 235 (267)
Q Consensus 187 ~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v~ 235 (267)
..++|.+.|+|||||++.|+++|+++|+||....-.+. ...+.|+.+
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d--~~~g~Ffmr 52 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFND--EDSSKFFMR 52 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTTTEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeec--CCCCeEEEE
Confidence 46789999999999999999999999999999887542 233456654
No 24
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=96.95 E-value=0.0016 Score=58.82 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=35.6
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC
Q 024465 72 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 110 (267)
Q Consensus 72 ~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~ 110 (267)
...+++|.|+||||+.+.++..|+++|+||.+.+.++..
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~ 47 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDD 47 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEET
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecC
Confidence 346899999999999999999999999999999999643
No 25
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=96.86 E-value=0.0062 Score=54.80 Aligned_cols=36 Identities=14% Similarity=0.296 Sum_probs=33.3
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEe
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDT 223 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T 223 (267)
.++|.+.|+|||||++.||++|+++|+||....-.+
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~ 41 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYN 41 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeee
Confidence 578999999999999999999999999999998754
No 26
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.83 E-value=0.0052 Score=50.91 Aligned_cols=62 Identities=18% Similarity=0.242 Sum_probs=48.7
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCC-eeE-EEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 024465 74 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VKQ-TKFFITRLDTGRKVEDPDLLERIRLTIIN 143 (267)
Q Consensus 74 t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~-~~~-d~F~I~~~~~g~~l~~~~~~erl~~~L~~ 143 (267)
..+.|.+.|+||+|++++++|++.|+||.+..+....+ +.. -+|.+. . ++..+++|.+.|..
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~-------d~~~leqI~kqL~K 67 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-G-------DEKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-S-------CHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-c-------cHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999987664 443 344553 2 24677888888765
No 27
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=96.73 E-value=0.0085 Score=53.88 Aligned_cols=47 Identities=9% Similarity=0.116 Sum_probs=38.5
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEEE
Q 024465 187 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 235 (267)
Q Consensus 187 ~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v~ 235 (267)
..++|.+.|+|||||++.||++|+++|+||....-.+. ...+.|+.+
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d--~~~g~Ffmr 53 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDD--RQSGRFFIR 53 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTTTEEEEE
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeecc--CCCCeeEEE
Confidence 35789999999999999999999999999999887653 233456554
No 28
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=96.73 E-value=0.0016 Score=60.70 Aligned_cols=41 Identities=15% Similarity=0.269 Sum_probs=37.1
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCe
Q 024465 187 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLV 227 (267)
Q Consensus 187 ~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~ 227 (267)
..++|.+.|+|||||++.|+++|+++|+||....-.+.++.
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~ 51 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHR 51 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCE
Confidence 46789999999999999999999999999999998776654
No 29
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.60 E-value=0.082 Score=44.01 Aligned_cols=111 Identities=14% Similarity=0.147 Sum_probs=71.8
Q ss_pred CCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEcC--Cee-EEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhh
Q 024465 71 SDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVK-QTKFFITRLDTGRKVEDPDLLERIRLTIINNLL 146 (267)
Q Consensus 71 ~~~t~V~V~-~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~--~~~-~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~ 146 (267)
++.+.|+|. .+|+||.++++...|.+.|+||..-...... .+. --.|.|... ..++..+.|.+...
T Consensus 14 ~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~----------~~~~a~~~L~~~~~ 83 (181)
T 3s1t_A 14 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD----------VGPAAVEKLDSLRN 83 (181)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETT----------THHHHHHHHHHTHH
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehh----------HHHHHHHHHHHHHH
Confidence 466777764 6899999999999999999999765443232 333 345777542 11223333333111
Q ss_pred ccCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCccEEEEE
Q 024465 147 KYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 220 (267)
Q Consensus 147 ~~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~---DRpGLL~~Itr~l~~~gl~I~~a~ 220 (267)
. +. ...|.+++ +...+.+.+. ++||+++++.++|++.|+||....
T Consensus 84 e--------l~------------------~~~v~~~~---~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 84 E--------IG------------------FSQLLYDD---HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp H--------HC------------------CSEEEEES---CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred h--------cC------------------cceEEEeC---CEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 0 00 01122222 4667777665 899999999999999999998877
No 30
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.48 E-value=0.0065 Score=51.65 Aligned_cols=65 Identities=11% Similarity=0.187 Sum_probs=48.3
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEE-ecC-CeeeeEEEEEeCCCCCChHHHHHHHHHHHHHc
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEID-TEG-LVAKDKFHVSYGGAALNSSLSQVLVNCLRYYL 257 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~-T~g-~~a~d~F~v~d~G~~l~~~~~~~L~~~L~~~l 257 (267)
...|.|...|+||.|++|+++|++.|+||.+..+. |.. +...=++.|... +...++|.+.|.+.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-----e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-----DKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-----TTHHHHHHHHHTTST
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-----HHHHHHHHHHhcCcC
Confidence 56788999999999999999999999999999986 433 334444555323 335677777776643
No 31
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.43 E-value=0.014 Score=47.03 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=44.5
Q ss_pred EEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 024465 75 IVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIIN 143 (267)
Q Consensus 75 ~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~ 143 (267)
.|.|.|.||+|||.+|+.+|.+.++||....+.+. +. +++.-+ ..+.+.+..|...|..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~--g~---i~~~~~-----~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI--GR---IYLNFA-----ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT--TE---EEEEEC-----CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC--CE---EEEEEE-----eCCHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999666 32 334332 1234566777776655
No 32
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.32 E-value=0.0097 Score=49.34 Aligned_cols=62 Identities=15% Similarity=0.239 Sum_probs=48.3
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCC-eeE-EEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 024465 74 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VKQ-TKFFITRLDTGRKVEDPDLLERIRLTIIN 143 (267)
Q Consensus 74 t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~-~~~-d~F~I~~~~~g~~l~~~~~~erl~~~L~~ 143 (267)
..++|...|+||+|++++++|++.|+||.+..+....+ +.. -+|.+.. ++..+++|.+.|..
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~K 68 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNK 68 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999986654 433 3455532 14677888887665
No 33
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.24 E-value=0.0078 Score=52.08 Aligned_cols=38 Identities=21% Similarity=0.174 Sum_probs=31.1
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecC
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEG 225 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g 225 (267)
...|.+.+.||||+|++|+++|+++++||......+..
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 56788999999999999999999999999999998854
No 34
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.21 E-value=0.023 Score=48.43 Aligned_cols=124 Identities=13% Similarity=0.153 Sum_probs=76.5
Q ss_pred CCCCCCEEE-EeecCCCCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEcC--CeeE-EEEEEEeCCCCCCCCC
Q 024465 56 DYIPMPHVL-IDQDSNSDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVKQ-TKFFITRLDTGRKVED 130 (267)
Q Consensus 56 ~~~~~p~V~-i~~~~~~~~t~V~V~-~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~--~~~~-d~F~I~~~~~g~~l~~ 130 (267)
+..+.|.|. |.. .++.+.|+|. .+|+||..+++...|++.|+||-.-...... ++.. ..|.+...
T Consensus 19 ~~mE~~vVtGIa~--~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~-------- 88 (200)
T 4go7_X 19 NHMEDPILTGVAH--DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD-------- 88 (200)
T ss_dssp -CCCSCEEEEEEE--ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG--------
T ss_pred CccccCcEEEEEc--cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh--------
Confidence 345567663 332 4577888887 6999999999999999999999875443322 2333 34555431
Q ss_pred hHHHHHHHHHHHHHhhccCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEE---eCCcccHHHHHHH
Q 024465 131 PDLLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIE---TADRPGLLVEIMK 207 (267)
Q Consensus 131 ~~~~erl~~~L~~~L~~~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~---~~DRpGLL~~Itr 207 (267)
.+++....|.+.... +. ...+.+++ +...+.+. ...+||+.+++.+
T Consensus 89 --d~~~~~~~l~~~~~~--------~~------------------~~~v~~~~---~iakVSvVG~GM~~~~GVaak~F~ 137 (200)
T 4go7_X 89 --VGPAAVEKLDSLRNE--------IG------------------FSQLLYDD---HIGKVSLIGAGMRSHPGVTATFCE 137 (200)
T ss_dssp --GHHHHHHHHHTTHHH--------HC------------------CSEEEEEC---CEEEEEEEEESCTTCHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHhh--------hc------------------eeeEEEec---CeeeeeeeccccccCCCcHHHHHH
Confidence 222233332221111 00 01122222 34455554 4588999999999
Q ss_pred HHHhCCccEEEEE
Q 024465 208 IIADVNVDVESAE 220 (267)
Q Consensus 208 ~l~~~gl~I~~a~ 220 (267)
+|++.|+||....
T Consensus 138 aLa~~~INI~mIs 150 (200)
T 4go7_X 138 ALAAVGVNIELIS 150 (200)
T ss_dssp HHHHTTCCCCEEE
T ss_pred HHHHCCCCEEEEE
Confidence 9999999998875
No 35
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.87 E-value=0.15 Score=47.90 Aligned_cols=110 Identities=20% Similarity=0.224 Sum_probs=73.0
Q ss_pred CCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEcC--Cee-EEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhh
Q 024465 71 SDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEG--SVK-QTKFFITRLDTGRKVEDPDLLERIRLTIINNLL 146 (267)
Q Consensus 71 ~~~t~V~V~-~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~--~~~-~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~ 146 (267)
++.+.|+|. ..|+||.++++...|.+.|+||..-...+.. .+. .-.|.|... +.++ ..+.|++ +.
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~-------~~~~---a~~~l~~-~~ 330 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS-------DGRR---AMEILKK-LQ 330 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT-------THHH---HHHHHHH-HH
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech-------hHHH---HHHHHHH-HH
Confidence 467888888 6899999999999999999999976654332 232 345666531 1222 2333333 21
Q ss_pred ccCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCccEEEE
Q 024465 147 KYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESA 219 (267)
Q Consensus 147 ~~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~---DRpGLL~~Itr~l~~~gl~I~~a 219 (267)
.. .. + ..+.++ .+...+.|.+. ++||.++++.++|.+.|+||...
T Consensus 331 ~~-~~---------------------~---~~v~~~---~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 331 VQ-GN---------------------W---TNVLYD---DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp TT-TT---------------------C---SEEEEE---CCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred HH-cC---------------------C---ceEEEe---CCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 10 00 0 012222 24677888775 79999999999999999999854
No 36
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.47 E-value=0.025 Score=48.90 Aligned_cols=37 Identities=11% Similarity=0.132 Sum_probs=31.1
Q ss_pred EEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcC
Q 024465 74 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEG 110 (267)
Q Consensus 74 t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~ 110 (267)
..+.|.+.||||+|++++.+|++++.||...+..+..
T Consensus 5 VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 5789999999999999999999999999999999976
No 37
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=95.19 E-value=0.07 Score=45.24 Aligned_cols=63 Identities=13% Similarity=0.207 Sum_probs=46.1
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCC-eeE-EEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 024465 73 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGS-VKQ-TKFFITRLDTGRKVEDPDLLERIRLTIIN 143 (267)
Q Consensus 73 ~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~-~~~-d~F~I~~~~~g~~l~~~~~~erl~~~L~~ 143 (267)
...++|...|+||.|++++++|+..|+||.+-.+....+ +.. -++.+.. . +..+++|.+.|..
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g----~----e~~ieqL~kQL~K 93 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKG----D----DKTIEQIEKQAYK 93 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEE----C----TTHHHHHHHHHTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEEC----C----HHHHHHHHHHhcC
Confidence 358999999999999999999999999999988875544 443 3344532 1 2456667766544
No 38
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=95.06 E-value=0.045 Score=51.37 Aligned_cols=48 Identities=21% Similarity=0.320 Sum_probs=42.4
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEE
Q 024465 187 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 234 (267)
Q Consensus 187 ~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v 234 (267)
+...|-+.-.|+||.+..|+.+|.++|+||....+.+.|+.+.-++.+
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 455677889999999999999999999999999999988887777666
No 39
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=94.97 E-value=0.078 Score=41.89 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=31.9
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEe
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDT 223 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T 223 (267)
-..|.+..+|+||.|++|++.|+++|+||....+..
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~ 41 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAE 41 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEe
Confidence 356778889999999999999999999999988754
No 40
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=94.35 E-value=0.13 Score=46.07 Aligned_cols=55 Identities=13% Similarity=0.150 Sum_probs=44.6
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCe-eeeEEEEEeCCCCCC
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAALN 242 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~-a~d~F~v~d~G~~l~ 242 (267)
.+.|-+..+|+||.|+++-..|+.+|||+.+.+.-..+++ ..=.|||.-.|..-+
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~eg~~~d 255 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFIGHRED 255 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEESCTTS
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEecCCCc
Confidence 4677777789999999999999999999999999776655 666788844787543
No 41
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=94.12 E-value=0.24 Score=47.86 Aligned_cols=62 Identities=19% Similarity=0.337 Sum_probs=48.9
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEec--CCeeeeEEEEEeCCCCCChHHHHHHHH
Q 024465 187 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTE--GLVAKDKFHVSYGGAALNSSLSQVLVN 251 (267)
Q Consensus 187 ~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~--g~~a~d~F~v~d~G~~l~~~~~~~L~~ 251 (267)
++..|.+.-.|+||.+..|+.+|.++|+||...++.-. |+.+.-++.+ ..+++++..++|++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v---d~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL---DQDVPDDVRTAIAA 516 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE---SSCCCHHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE---CCCCCHHHHHHHhc
Confidence 47788899999999999999999999999999999654 4555555555 44566766666654
No 42
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=93.92 E-value=0.44 Score=43.51 Aligned_cols=58 Identities=14% Similarity=0.190 Sum_probs=43.2
Q ss_pred eEEEEEEeC--CcccHHHHHHHHHHhCCccEEEEEEEecCCe-eeeEEEEEeCCCCCChHH
Q 024465 188 RSLLYIETA--DRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAALNSSL 245 (267)
Q Consensus 188 ~t~l~i~~~--DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~-a~d~F~v~d~G~~l~~~~ 245 (267)
.+.+-+... |+||-|+++-..|+.+|||+++.+.-..+++ -.=.|||.-.|..-+...
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~~~d~~v 266 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTLDAAPWEERF 266 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEESSCTTSHHH
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEEeCCcCCHHH
Confidence 344445554 7999999999999999999999999776665 455777743887643333
No 43
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=93.65 E-value=0.75 Score=43.78 Aligned_cols=126 Identities=10% Similarity=0.180 Sum_probs=77.7
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhhc
Q 024465 71 SDATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 147 (267)
Q Consensus 71 ~~~t~V~V~~---~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~~ 147 (267)
++.+.|+|.+ .++||.++++..+|.+.|+||..-...+.. .--.|.|... ..++..+.|.+.+..
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse--~~Is~~V~~~----------d~~~a~~~L~~~l~~ 383 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE--TNISLVVSEE----------DVDKALKALKREFGD 383 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT--CCEEEEEEGG----------GHHHHHHHHHHHHCC
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC--CEEEEEEech----------HHHHHHHHHHHHHhh
Confidence 4778899996 688999999999999999999876653332 2234777542 123344444433410
Q ss_pred cCCCchhHhhhccccCccCCCccccccc---ceeEEeccCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCccEEEEEE
Q 024465 148 YHPESSEQLAMGEAFGIKAPEKKLDVDI---ATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAEI 221 (267)
Q Consensus 148 ~~~~~~~~la~~~~~~~~~~~r~~~~~~---~~~V~i~~~~s~~t~l~i~~~---DRpGLL~~Itr~l~~~gl~I~~a~i 221 (267)
. + ++ .+.. -..+.++ .+...+.|.+. ++||.++++.++|++.|+||...
T Consensus 384 ~--------------~----~~--~~~~~~~~~~v~~~---~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mi-- 438 (473)
T 3c1m_A 384 F--------------G----KK--SFLNNNLIRDVSVD---KDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMI-- 438 (473)
T ss_dssp ------------------------CTTSCCCEEEEEEE---EEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEE--
T ss_pred h--------------c----cc--ccccccccceEEEe---CCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEE--
Confidence 0 0 00 0000 0112222 24677888876 58999999999999999999443
Q ss_pred EecCCeeee-EEEE
Q 024465 222 DTEGLVAKD-KFHV 234 (267)
Q Consensus 222 ~T~g~~a~d-~F~v 234 (267)
+.|....+ .|.|
T Consensus 439 -sqgtSe~~Is~vV 451 (473)
T 3c1m_A 439 -AQGSSEVNISFVI 451 (473)
T ss_dssp -EESSCSSEEEEEE
T ss_pred -ecCCCCceEEEEE
Confidence 34444333 4555
No 44
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=93.65 E-value=0.19 Score=45.59 Aligned_cols=54 Identities=24% Similarity=0.388 Sum_probs=43.7
Q ss_pred eEEEEEEeC-CcccHHHHHHHHHHhCCccEEEEEEEecCCe-eeeEEEEEeCCCCC
Q 024465 188 RSLLYIETA-DRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAAL 241 (267)
Q Consensus 188 ~t~l~i~~~-DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~-a~d~F~v~d~G~~l 241 (267)
.|.|-+..+ |+||.|+++-..|+.+|||+.+.+.-..+++ ..=.|||.-.|..-
T Consensus 201 kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~~~ 256 (313)
T 3mwb_A 201 KTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDADGHAT 256 (313)
T ss_dssp EEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEESCTT
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEeCCCC
Confidence 577777775 9999999999999999999999998766554 45578884377753
No 45
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=93.30 E-value=0.31 Score=43.20 Aligned_cols=66 Identities=18% Similarity=0.239 Sum_probs=48.1
Q ss_pred CeEEEEEEe---CCcccHHHHHHHHHHhCCccEEEEEEEecCCe-eeeEEEEEeCCCCCChHHHHHHHHHHH
Q 024465 187 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAEIDTEGLV-AKDKFHVSYGGAALNSSLSQVLVNCLR 254 (267)
Q Consensus 187 ~~t~l~i~~---~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~-a~d~F~v~d~G~~l~~~~~~~L~~~L~ 254 (267)
..|.|-+.. .|+||.|+++-..|+.+|||+.+.+.-..+++ ..=.|||.-. . +.++..++..+.|.
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e-~-~~d~~v~~aL~~L~ 254 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD-S-AITTDIKKVIAILE 254 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES-C-CSCHHHHHHHHHHH
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe-c-CCcHHHHHHHHHHH
Confidence 356777777 89999999999999999999999999776554 5667888436 3 44553333333443
No 46
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=93.09 E-value=1.8 Score=42.50 Aligned_cols=139 Identities=15% Similarity=0.150 Sum_probs=86.7
Q ss_pred CCCeEEEEEE-eCCCccHHHHHHHHHHHCCceEEEEEEEEcC---Ce--e-EEEEEEEeCCCCCCCCChHHHHHHHHHHH
Q 024465 70 NSDATIVQLS-FGDRLGALIDTMNALKDLGLDVAKGTVNTEG---SV--K-QTKFFITRLDTGRKVEDPDLLERIRLTII 142 (267)
Q Consensus 70 ~~~~t~V~V~-~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~---~~--~-~d~F~I~~~~~g~~l~~~~~~erl~~~L~ 142 (267)
+++.+.|+|. .+|+||..+++...|.+.|+||---..+... ++ . --.|.+.. +.+++..+.|+
T Consensus 441 ~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~----------~d~~~a~~~l~ 510 (600)
T 3l76_A 441 DQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE----------GDSSQAEAILQ 510 (600)
T ss_dssp ECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH----------HHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH----------HHHHHHHHHHH
Confidence 3577788775 5899999999999999999999654444332 13 2 23455543 34445555544
Q ss_pred HHhhccCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEe---CCcccHHHHHHHHHHhCCccEEEE
Q 024465 143 NNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIET---ADRPGLLVEIMKIIADVNVDVESA 219 (267)
Q Consensus 143 ~~L~~~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~---~DRpGLL~~Itr~l~~~gl~I~~a 219 (267)
+ +... .. ..++.+++ +..+|.+.+ ..+||..+++.++|++.|+||...
T Consensus 511 ~-~~~~-~~------------------------~~~v~~~~---~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mi 561 (600)
T 3l76_A 511 P-LIKD-WL------------------------DAAIVVNK---AIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMI 561 (600)
T ss_dssp H-HTTT-ST------------------------TCEEEEEC---CEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEE
T ss_pred H-HHHh-cC------------------------CceEEEeC---CeEEEEEECcccccCccHHHHHHHHHHHCCCceEEE
Confidence 4 2110 00 01122332 477888876 589999999999999999999776
Q ss_pred EEEecCCeeeeEEEEEeCCCCCChHHHHHHHHHHHHHcC
Q 024465 220 EIDTEGLVAKDKFHVSYGGAALNSSLSQVLVNCLRYYLR 258 (267)
Q Consensus 220 ~i~T~g~~a~d~F~v~d~G~~l~~~~~~~L~~~L~~~l~ 258 (267)
. |-. ..=.+.|. ....+...++|+.+..
T Consensus 562 s--tSE--i~Is~vV~-------~~~~~~Av~alh~~F~ 589 (600)
T 3l76_A 562 A--TSE--IKISCVVP-------QDRGVDALKAAHSAFN 589 (600)
T ss_dssp E--ECS--SEEEEEEE-------GGGHHHHHHHHHHHTT
T ss_pred E--cCC--ceEEEEEe-------HHHHHHHHHHHHHHhC
Confidence 6 322 22234442 2233444567777664
No 47
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=91.79 E-value=2.4 Score=41.61 Aligned_cols=123 Identities=15% Similarity=0.225 Sum_probs=75.6
Q ss_pred CCeEEEEEEeC---CCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhhc
Q 024465 71 SDATIVQLSFG---DRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 147 (267)
Q Consensus 71 ~~~t~V~V~~~---DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~~ 147 (267)
++...|.|.+. .+||...++..+|.+.|+||..-. +. ..--.|.|... ..++..+.|.+.+..
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS--e~~Is~vI~~~----------d~~~Av~aLh~~f~~ 418 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS--EVKVSCVIDQR----------DADRAIAALSNAFGV 418 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEGG----------GHHHHHHHHHHHTTC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC--CCEEEEEEcHH----------HHHHHHHHHHHhhcc
Confidence 57889999975 799999999999999999998665 32 22233666542 234445555555532
Q ss_pred cCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEE-EeCCcccHHHHHHHHHHhCCccEEEEEEE
Q 024465 148 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYI-ETADRPGLLVEIMKIIADVNVDVESAEID 222 (267)
Q Consensus 148 ~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i-~~~DRpGLL~~Itr~l~~~gl~I~~a~i~ 222 (267)
.... . ..+.....-+.-+-|..+. +...|.+ ..+|+||+.++|-..|+++|++|...--+
T Consensus 419 ~~t~----------~--~~~~~~~~~~~v~Gia~~~---~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~ 479 (600)
T 3l76_A 419 TLSP----------P--KNQTDTSHLPAVRGVALDQ---DQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQS 479 (600)
T ss_dssp CBCC----------C--CCCCC---CCSCCEEEEEC---SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEE
T ss_pred cCCC----------c--cccccccccCceEEEEeeC---CEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEec
Confidence 1000 0 0000000111223343333 3455555 45899999999999999999999655443
No 48
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=90.83 E-value=1.5 Score=41.44 Aligned_cols=108 Identities=12% Similarity=0.173 Sum_probs=70.6
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhhc
Q 024465 71 SDATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 147 (267)
Q Consensus 71 ~~~t~V~V~~---~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~~ 147 (267)
++.+.|+|.+ .+.||.++++..+|.+.|++|..-. +... --.|.|... +-. ...+++.+.|...+..
T Consensus 296 ~~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~--~~~~--~is~~V~~~-d~~-----~~~~~~~~el~~~~~~ 365 (446)
T 3tvi_A 296 KNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP--SGVD--SVSLVIEDC-KLD-----GKCDKIIEEIKKQCNP 365 (446)
T ss_dssp EEEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC--EETT--EEEEEEEHH-HHT-----TTHHHHHHHHHHHSCC
T ss_pred CCEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe--cCCC--EEEEEEecc-hHH-----HHHHHHHHHHHHhcCC
Confidence 4677889986 6899999999999999999998642 2222 234667542 110 0123333333321210
Q ss_pred cCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCccEEEEE
Q 024465 148 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAE 220 (267)
Q Consensus 148 ~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~---DRpGLL~~Itr~l~~~gl~I~~a~ 220 (267)
..|.+++ +...|.+.+. .+||+.+++.++|++.|+||....
T Consensus 366 -----------------------------~~v~v~~---~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 366 -----------------------------DSIEIHP---NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp -----------------------------SEEEEEE---EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred -----------------------------CcEEEeC---CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 0122222 4678888776 589999999999999999998765
No 49
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=88.92 E-value=1.4 Score=41.50 Aligned_cols=48 Identities=19% Similarity=0.361 Sum_probs=43.2
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEE
Q 024465 187 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 234 (267)
Q Consensus 187 ~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v 234 (267)
...+|-+.-.|.||.|..|+.+|+++|+||......|.|+-+-.+.-|
T Consensus 342 ~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 342 TGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp SSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 467999999999999999999999999999999999999987665555
No 50
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.34 E-value=1.3 Score=41.44 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=40.6
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEE
Q 024465 72 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFI 119 (267)
Q Consensus 72 ~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I 119 (267)
++..+.+.-+|+||.+..|..+|.++|+||-.-.+.+.++.++-.+-+
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 456788999999999999999999999999999999966666544444
No 51
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=87.80 E-value=0.84 Score=43.07 Aligned_cols=68 Identities=12% Similarity=0.223 Sum_probs=50.1
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCC-eeeeEEEEEeCCCCCChHHHHHHHHHHHHH
Q 024465 187 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGL-VAKDKFHVSYGGAALNSSLSQVLVNCLRYY 256 (267)
Q Consensus 187 ~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~-~a~d~F~v~d~G~~l~~~~~~~L~~~L~~~ 256 (267)
..+.|-+...|+||-|+++-..|+.+|||+++.+.-.... ...=.|||.-. ...++..+++.+.|...
T Consensus 33 dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~e--h~~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 33 GAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD--KRTKPVLGSIIKSLRND 101 (429)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC--GGGHHHHHHHHHHHHHT
T ss_pred CeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEe--eCCCHHHHHHHHHHHhh
Confidence 4677777788999999999999999999999999866654 45667888326 33455445555555544
No 52
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=87.48 E-value=2.9 Score=40.15 Aligned_cols=42 Identities=17% Similarity=0.261 Sum_probs=37.2
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCe
Q 024465 71 SDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSV 112 (267)
Q Consensus 71 ~~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~ 112 (267)
..+..+.+.-.|+||.+..++..|.++|+||-..++.....+
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~ 493 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEG 493 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSS
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCC
Confidence 456788899999999999999999999999999999886543
No 53
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=87.26 E-value=3.8 Score=39.39 Aligned_cols=121 Identities=15% Similarity=0.213 Sum_probs=76.1
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCC-ChHHHHHHHHHHHHHhh
Q 024465 71 SDATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVE-DPDLLERIRLTIINNLL 146 (267)
Q Consensus 71 ~~~t~V~V~~---~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~-~~~~~erl~~~L~~~L~ 146 (267)
++.+.|+|.+ .++||.++++..+|.+.|++|..-. +... --+|.|... +..... ..+.++++... |.
T Consensus 339 ~~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--sse~--sis~~v~~~-~~~~~~~~~~~l~~~~~e----l~ 409 (510)
T 2cdq_A 339 RNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--TSEV--SISLTLDPS-KLWSRELIQQELDHVVEE----LE 409 (510)
T ss_dssp EEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--EETT--EEEEEECCG-GGSSSCCCHHHHHHHHHH----HT
T ss_pred CCeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--eCCC--eEEEEEech-HhhhhhHHHHHHHHHHHH----hC
Confidence 4778999986 7899999999999999999998863 2222 234777542 211100 01222222222 21
Q ss_pred ccCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeC--CcccHHHHHHHHHHhCCccEEEEEEEec
Q 024465 147 KYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA--DRPGLLVEIMKIIADVNVDVESAEIDTE 224 (267)
Q Consensus 147 ~~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~--DRpGLL~~Itr~l~~~gl~I~~a~i~T~ 224 (267)
.. ..|.+++ +...|.+.+. ..||+.+++..+|++.|+||.... .
T Consensus 410 ~~----------------------------~~v~~~~---~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs---q 455 (510)
T 2cdq_A 410 KI----------------------------AVVNLLK---GRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS---Q 455 (510)
T ss_dssp TT----------------------------SEEEEEE---EEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE---E
T ss_pred CC----------------------------CeEEEeC---CcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE---e
Confidence 10 0122222 3667777776 779999999999999999998764 5
Q ss_pred CCeeee-EEEE
Q 024465 225 GLVAKD-KFHV 234 (267)
Q Consensus 225 g~~a~d-~F~v 234 (267)
|..-.+ .|.|
T Consensus 456 GsSei~Is~vV 466 (510)
T 2cdq_A 456 GASKVNISFIV 466 (510)
T ss_dssp CTTCSEEEEEE
T ss_pred cCCcceEEEEE
Confidence 544444 4555
No 54
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=85.86 E-value=0.81 Score=43.37 Aligned_cols=35 Identities=29% Similarity=0.566 Sum_probs=30.0
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCccEEEEEE
Q 024465 187 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEI 221 (267)
Q Consensus 187 ~~t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i 221 (267)
..+-|.+...|+||.|++|+.+|.++|++|.+.-=
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q 392 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQ 392 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEee
Confidence 36677888999999999999999999999988753
No 55
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=84.18 E-value=4 Score=32.83 Aligned_cols=34 Identities=12% Similarity=0.115 Sum_probs=31.0
Q ss_pred CCeEEEEEEeCC---CccHHHHHHHHHHHCCceEEEE
Q 024465 71 SDATIVQLSFGD---RLGALIDTMNALKDLGLDVAKG 104 (267)
Q Consensus 71 ~~~t~V~V~~~D---RpGLL~di~~~L~~~~lnI~~A 104 (267)
++...|.|.+.+ +||.++++..+|.+.|+||..-
T Consensus 101 ~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 101 DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 477899999987 9999999999999999999883
No 56
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=79.99 E-value=17 Score=32.12 Aligned_cols=64 Identities=17% Similarity=0.315 Sum_probs=44.9
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCee-EEEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 024465 73 ATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITRLDTGRKVEDPDLLERIRLTIIN 143 (267)
Q Consensus 73 ~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~-~d~F~I~~~~~g~~l~~~~~~erl~~~L~~ 143 (267)
-|-|.+..+|+||-|+++...|...|+|..+-.-.-.+... .-.|||.- +|.. .+ .++++.|.+
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~--eg~~-~d----~~v~~aL~~ 264 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF--IGHR-ED----QNVHNALEN 264 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE--ESCT-TS----HHHHHHHHH
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE--ecCC-Cc----HHHHHHHHH
Confidence 45666666899999999999999999999876666555533 34588865 4653 23 345555544
No 57
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=76.63 E-value=8.1 Score=36.19 Aligned_cols=56 Identities=21% Similarity=0.307 Sum_probs=44.6
Q ss_pred CCCCCEEEEeecCCCCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeE
Q 024465 57 YIPMPHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQ 114 (267)
Q Consensus 57 ~~~~p~V~i~~~~~~~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~ 114 (267)
.++-|.|.... ..+...|.+.=+|.||.|..|..+|.+.|+||..-...|.++.++
T Consensus 329 ~Vn~p~~~~~~--~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y 384 (416)
T 3k5p_A 329 AVNFPQVQLPP--RPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGY 384 (416)
T ss_dssp BSSSCCCCCCC--CSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEE
T ss_pred eeeCCCcCCCC--CCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEE
Confidence 33445554432 236789999999999999999999999999999888888877764
No 58
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=76.55 E-value=21 Score=32.06 Aligned_cols=53 Identities=23% Similarity=0.387 Sum_probs=39.1
Q ss_pred CeEEEEEEeC-CCccHHHHHHHHHHHCCceEEEEEEEEcCCee-EEEEEEEeCCCCC
Q 024465 72 DATIVQLSFG-DRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITRLDTGR 126 (267)
Q Consensus 72 ~~t~V~V~~~-DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~-~d~F~I~~~~~g~ 126 (267)
+-|-|.+..+ |+||.|+++...|...|+|...-.-.-.+... .-.|||.- +|.
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~ 254 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA--DGH 254 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE--ESC
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE--eCC
Confidence 4566667775 99999999999999999999766655554433 24588865 465
No 59
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=76.32 E-value=1.9 Score=34.41 Aligned_cols=111 Identities=14% Similarity=0.072 Sum_probs=67.0
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhhc
Q 024465 71 SDATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 147 (267)
Q Consensus 71 ~~~t~V~V~~---~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~~ 147 (267)
++.+.|+|.+ +++||.++++..+|.+.|+||..-. +... --.|.|... + +++++.+. |..
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~--~Isf~v~~~-~--------~~~~il~~----l~~ 78 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEV--GVSLTIDND-K--------NLPDIVRA----LSD 78 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSS--EEEEEESCC-T--------THHHHHHH----HTT
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCC--EEEEEECCh-H--------HHHHHHHH----Hhc
Confidence 4677888885 5789999999999999999996543 2222 234666532 1 12222222 221
Q ss_pred cCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCccEEEEEEEec
Q 024465 148 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAEIDTE 224 (267)
Q Consensus 148 ~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~---DRpGLL~~Itr~l~~~gl~I~~a~i~T~ 224 (267)
. ..|.+.+ +...+.+.+. ++||+.+++..+|+ |++|.... +
T Consensus 79 --~--------------------------~~v~~~~---~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is---q 122 (157)
T 3mah_A 79 --I--------------------------GDVTVDK---DMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS---Y 122 (157)
T ss_dssp --T--------------------------EEEEEEE---EEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE---E
T ss_pred --c--------------------------CeEEEeC---CeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe---e
Confidence 0 1122222 3567777765 68999999999999 88887654 4
Q ss_pred CCee-eeEEEE
Q 024465 225 GLVA-KDKFHV 234 (267)
Q Consensus 225 g~~a-~d~F~v 234 (267)
|... .-.|.|
T Consensus 123 g~Se~~is~vv 133 (157)
T 3mah_A 123 GGSNYNVSVLV 133 (157)
T ss_dssp CSSSSCEEEEE
T ss_pred CCCCCEEEEEE
Confidence 4332 234555
No 60
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=75.56 E-value=6.4 Score=32.00 Aligned_cols=38 Identities=13% Similarity=0.406 Sum_probs=31.3
Q ss_pred CeEEEEE-EeCCcccHHHHHHHHHHhCCccEEEEEEEec
Q 024465 187 KRSLLYI-ETADRPGLLVEIMKIIADVNVDVESAEIDTE 224 (267)
Q Consensus 187 ~~t~l~i-~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~ 224 (267)
+.+.|.| ...|+||.+++|.+.|+++|++|...-.++.
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~ 52 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVS 52 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCC
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4566666 3589999999999999999999988776543
No 61
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=72.33 E-value=16 Score=29.09 Aligned_cols=34 Identities=12% Similarity=0.037 Sum_probs=29.8
Q ss_pred CCeEEEEEEeCC---CccHHHHHHHHHHHCCceEEEE
Q 024465 71 SDATIVQLSFGD---RLGALIDTMNALKDLGLDVAKG 104 (267)
Q Consensus 71 ~~~t~V~V~~~D---RpGLL~di~~~L~~~~lnI~~A 104 (267)
++...|.|.+.+ +||.++++..+|.+.|+||..-
T Consensus 93 ~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 93 PDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp CSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred CCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 467789999877 9999999999999999999543
No 62
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=71.95 E-value=44 Score=30.17 Aligned_cols=54 Identities=15% Similarity=0.184 Sum_probs=38.4
Q ss_pred CeEEEEEEeC--CCccHHHHHHHHHHHCCceEEEEEEEEcCCee-EEEEEEEeCCCCCC
Q 024465 72 DATIVQLSFG--DRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITRLDTGRK 127 (267)
Q Consensus 72 ~~t~V~V~~~--DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~-~d~F~I~~~~~g~~ 127 (267)
+.+.+.+... |+||-|+++-..|...|+|...-.-.-.+... .-.|||.- +|..
T Consensus 205 ~kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~~ 261 (329)
T 3luy_A 205 EYESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL--DAAP 261 (329)
T ss_dssp CEEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE--SSCT
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE--eCCc
Confidence 3344434443 79999999999999999999876666665544 35588865 5653
No 63
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=66.24 E-value=39 Score=27.24 Aligned_cols=56 Identities=11% Similarity=0.005 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhh
Q 024465 86 ALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLL 146 (267)
Q Consensus 86 LL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~ 146 (267)
+..-+..++.. ||.+++..+...+....-..+|... +|-. =+.++.+-+.|...|.
T Consensus 14 v~~li~p~~~~-g~eLvdve~~~~g~~~~LrV~ID~~-~gi~---lddC~~vSr~is~~LD 69 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKP-EGIT---LNDTADLTEMISPVLD 69 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEEEETTEEEEEEEEECS-SCCC---HHHHHHHHHHHGGGTT
T ss_pred HHHHHHHHHcC-CcEEEEEEEEecCCCcEEEEEEECC-CCCC---HHHHHHHHHHHHHHhc
Confidence 34445566667 9999999999888766545566553 5533 3678888888777665
No 64
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=64.51 E-value=5.9 Score=33.33 Aligned_cols=49 Identities=18% Similarity=0.289 Sum_probs=34.7
Q ss_pred CeEEEEEE-eCCcccHHHHHHHHHHhCCccEEEEEEEe--c-CCeeeeEEEEE
Q 024465 187 KRSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEIDT--E-GLVAKDKFHVS 235 (267)
Q Consensus 187 ~~t~l~i~-~~DRpGLL~~Itr~l~~~gl~I~~a~i~T--~-g~~a~d~F~v~ 235 (267)
+...|.|. .+|+||++++|-.+|++.|++|-..--+. . .....-.|-+.
T Consensus 34 ~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~ 86 (200)
T 4go7_X 34 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCS 86 (200)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEE
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecc
Confidence 35566664 57999999999999999999998764322 1 23444466664
No 65
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=63.63 E-value=38 Score=29.63 Aligned_cols=50 Identities=16% Similarity=0.245 Sum_probs=37.6
Q ss_pred CeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCee-EEEEEEEe
Q 024465 72 DATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITR 121 (267)
Q Consensus 72 ~~t~V~V~~---~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~-~d~F~I~~ 121 (267)
+-|-|.+.. +|+||-|+++...|...|+|..+-.-.-.+... .-.|||.-
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 345555666 899999999999999999999876666555432 34588865
No 66
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=63.54 E-value=24 Score=28.76 Aligned_cols=47 Identities=15% Similarity=0.097 Sum_probs=36.3
Q ss_pred CCeEEEEEEeC---CCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEe
Q 024465 71 SDATIVQLSFG---DRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITR 121 (267)
Q Consensus 71 ~~~t~V~V~~~---DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~ 121 (267)
++...|.|.+. +.||..+++..+|.+.|+||.... +..-. -.|.|..
T Consensus 94 ~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is--tSei~--Is~vV~~ 143 (181)
T 3s1t_A 94 DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TSEIR--ISVLCRD 143 (181)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EETTE--EEEEEEG
T ss_pred CCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE--cCCCE--EEEEEeH
Confidence 47788998876 899999999999999999998766 33222 2366654
No 67
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=63.09 E-value=15 Score=34.57 Aligned_cols=51 Identities=22% Similarity=0.266 Sum_probs=34.9
Q ss_pred CeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEc--CCeeEEEEEEEeC
Q 024465 72 DATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTE--GSVKQTKFFITRL 122 (267)
Q Consensus 72 ~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~--~~~~~d~F~I~~~ 122 (267)
..+-+-+...|+||.|+.|+.+|.++|++|....-.-. ++......++++.
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th~ 410 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHV 410 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEECS
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEecc
Confidence 33466778899999999999999999999976444322 1223556677774
No 68
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=60.02 E-value=53 Score=24.77 Aligned_cols=63 Identities=8% Similarity=-0.034 Sum_probs=46.9
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHC---CceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHH
Q 024465 71 SDATIVQLSFGDRLGALIDTMNALKDL---GLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTI 141 (267)
Q Consensus 71 ~~~t~V~V~~~DRpGLL~di~~~L~~~---~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L 141 (267)
+-.+.+.|.+.+.+++...|..++..+ ++++ ++.....|.+..+.|.-. +.+++++..|-+.|
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~---~~r~Ss~GkY~Svtv~v~-----v~S~eQv~aiY~~L 99 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP---TVKPSSKGNYHSVSITIN-----ATHIEQVETLYEEL 99 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE---EEEESSCSSEEEEEEEEC-----CSSHHHHHHHHHHH
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc---eecCCCCCeEEEEEEEEE-----ECCHHHHHHHHHHH
Confidence 345799999999999999999999988 7887 444555566656666543 45677777777764
No 69
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=46.38 E-value=48 Score=30.54 Aligned_cols=48 Identities=13% Similarity=0.280 Sum_probs=35.7
Q ss_pred eEEEEEE-eCCcccHHHHHHHHHHhCCccEEEEEEEec---CCeeeeEEEEE
Q 024465 188 RSLLYIE-TADRPGLLVEIMKIIADVNVDVESAEIDTE---GLVAKDKFHVS 235 (267)
Q Consensus 188 ~t~l~i~-~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~---g~~a~d~F~v~ 235 (267)
.+.|.|. ..|+||.+++|.+.|+++|++|.....+|. .+...-.|.|.
T Consensus 264 ~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~ 315 (421)
T 3ab4_A 264 EAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCP 315 (421)
T ss_dssp EEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEE
T ss_pred EEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEe
Confidence 5567776 589999999999999999999998765442 12334456664
No 70
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=41.57 E-value=87 Score=22.85 Aligned_cols=47 Identities=13% Similarity=0.033 Sum_probs=33.8
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCcc-EEEEEEEecCCeeeeEEEEEe-CCCCC
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVD-VESAEIDTEGLVAKDKFHVSY-GGAAL 241 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~-I~~a~i~T~g~~a~d~F~v~d-~G~~l 241 (267)
...+.+.+.| +..+.+.+.+.|+. +...-.....+. - |++.| +|+.+
T Consensus 67 ~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~--~-~~~~DPdGn~i 115 (128)
T 3g12_A 67 SLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGK--K-AIVLDPDGHSI 115 (128)
T ss_dssp SEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CE--E-EEEECTTCCEE
T ss_pred ceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCcc--E-EEEECCCCCEE
Confidence 5677888888 78889999999999 765333322222 2 89999 99876
No 71
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=39.08 E-value=23 Score=27.88 Aligned_cols=34 Identities=6% Similarity=0.065 Sum_probs=28.4
Q ss_pred CeEEEEEEe---CCcccHHHHHHHHHHhCCccEEEEE
Q 024465 187 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAE 220 (267)
Q Consensus 187 ~~t~l~i~~---~DRpGLL~~Itr~l~~~gl~I~~a~ 220 (267)
+-+.|.|.+ .++||.+++|..+|+++|++|....
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~ 53 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA 53 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE
Confidence 366777774 4789999999999999999997665
No 72
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=38.10 E-value=36 Score=31.99 Aligned_cols=51 Identities=16% Similarity=0.261 Sum_probs=37.5
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCee-EEEEEEEe
Q 024465 71 SDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVK-QTKFFITR 121 (267)
Q Consensus 71 ~~~t~V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~-~d~F~I~~ 121 (267)
.+-+-|.+..+|+||-|+++...|+..|+|+.+-.-.-.+... .-.|+|.-
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 3456666667899999999999999999999866555554432 34577743
No 73
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=37.26 E-value=93 Score=22.68 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=36.5
Q ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHCCce-EEEEEEEEcCCeeEEEEEEEeCCCCCCC
Q 024465 71 SDATIVQLSFGDRLGALIDTMNALKDLGLD-VAKGTVNTEGSVKQTKFFITRLDTGRKV 128 (267)
Q Consensus 71 ~~~t~V~V~~~DRpGLL~di~~~L~~~~ln-I~~A~I~T~~~~~~d~F~I~~~~~g~~l 128 (267)
.+++.+.+.+.| +..+...|.+.|+. +...-. ....+.. |+++++ +|..+
T Consensus 65 ~~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~-~~~~G~~--~~~~DP-dGn~i 115 (128)
T 3g12_A 65 IPSLQLGFQITD----LEKTVQELVKIPGAMCILDPT-DMPDGKK--AIVLDP-DGHSI 115 (128)
T ss_dssp CCSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEE-ECC-CEE--EEEECT-TCCEE
T ss_pred CCceEEEEEeCC----HHHHHHHHHHCCCceeccCce-eCCCccE--EEEECC-CCCEE
Confidence 345778888888 88889999999999 765433 3333444 899997 89864
No 74
>4esb_A Transcriptional regulator, PADR family; DNA binding protein, HTH fold; 2.50A {Bacillus cereus}
Probab=34.04 E-value=45 Score=24.89 Aligned_cols=65 Identities=6% Similarity=0.001 Sum_probs=44.5
Q ss_pred cccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEEEeCCCCCChH---HHHHHHHHHHHHcCCCCCc
Q 024465 198 RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSS---LSQVLVNCLRYYLRRPETD 263 (267)
Q Consensus 198 RpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v~d~G~~l~~~---~~~~L~~~L~~~l~~~~~~ 263 (267)
.+|-|+.+-+.|.+.|+-... .....+++..-.|.+++.|...-.. ..+.+.+.+...+.....+
T Consensus 41 s~gtlY~~L~rLe~~GlI~~~-~~~~~~g~~rk~Y~LT~~G~~~l~~~~~~~~~~~~~i~~il~~~~~~ 108 (115)
T 4esb_A 41 SEGSIYPLLLRMQKEKLIEGT-LKASSLGPKRKYYHITDKGLEQLEEFKQSWGMVSTTVNNLLQGESRW 108 (115)
T ss_dssp CHHHHHHHHHHHHHTTSEEEE-EEECTTSCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHTTCC---
T ss_pred CcChHHHHHHHHHHCCCeEEE-eeecCCCCCcEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Confidence 389999999999999985443 3233356677778888877765444 4567777888888655544
No 75
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=30.41 E-value=43 Score=31.31 Aligned_cols=119 Identities=15% Similarity=0.182 Sum_probs=72.9
Q ss_pred CCeEEEEEEe---CCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHhhc
Q 024465 71 SDATIVQLSF---GDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLK 147 (267)
Q Consensus 71 ~~~t~V~V~~---~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~~~L~~ 147 (267)
++.+.|+|.+ .+.||.++++..+|.+.|++|..-. +.. .--.|.|... +...-.....++++...|.. +.
T Consensus 306 ~~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--ss~--~sis~~v~~~-~~~~~~~~~~~~~~~~el~~-~~- 378 (449)
T 2j0w_A 306 RNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--TSE--VSVALTLDTT-GSTSTGDTLLTQSLLMELSA-LC- 378 (449)
T ss_dssp EEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--EET--TEEEEEECCC-CCSSTTCCSSCHHHHHHHHH-HS-
T ss_pred CCEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--eCC--CeEEEEEecc-ccchhhHHHHHHHHHHHhcc-CC-
Confidence 4678888886 4778999999999999999998765 222 2234777642 22100011223444444332 10
Q ss_pred cCCCchhHhhhccccCccCCCcccccccceeEEeccCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCccEEEEEEEec
Q 024465 148 YHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIETA---DRPGLLVEIMKIIADVNVDVESAEIDTE 224 (267)
Q Consensus 148 ~~~~~~~~la~~~~~~~~~~~r~~~~~~~~~V~i~~~~s~~t~l~i~~~---DRpGLL~~Itr~l~~~gl~I~~a~i~T~ 224 (267)
.|.++ .+...|.+.+. ..||+.+++..+|.+ +||... ++
T Consensus 379 ------------------------------~v~~~---~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mI---sq 420 (449)
T 2j0w_A 379 ------------------------------RVEVE---EGLALVALIGNDLSKACGVGKEVFGVLEP--FNIRMI---CY 420 (449)
T ss_dssp ------------------------------CEEEE---EEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEE---EE
T ss_pred ------------------------------eEEEe---CCeEEEEEECCCccccccHHHHHHHHHhC--CCeEEE---Ee
Confidence 01122 14678888887 579999999999966 666544 35
Q ss_pred CCeeee-EEEE
Q 024465 225 GLVAKD-KFHV 234 (267)
Q Consensus 225 g~~a~d-~F~v 234 (267)
|..-.+ .|.|
T Consensus 421 g~Se~~Is~vV 431 (449)
T 2j0w_A 421 GASSHNLCFLV 431 (449)
T ss_dssp SSCTTEEEEEE
T ss_pred cCCCcEEEEEE
Confidence 555334 4555
No 76
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=28.83 E-value=1.6e+02 Score=21.19 Aligned_cols=56 Identities=16% Similarity=0.110 Sum_probs=42.4
Q ss_pred EEEEeCCCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHH
Q 024465 76 VQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTII 142 (267)
Q Consensus 76 V~V~~~DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L~ 142 (267)
+...+.=-|.++.+++++|.++|+ .|+|...++|.. |++++. . +..++.++..-|.
T Consensus 21 ~V~TGgfg~~~v~ev~~am~~~g~---~gkii~~~dGl~--y~~T~~-----~-s~~eLdk~t~wLD 76 (85)
T 2l48_A 21 IIQSGAFSPYETPDVMGALTSLKM---TADFILQSDGLT--YFISKP-----T-SDAQLKAMKEYLD 76 (85)
T ss_dssp CEEECCBCTTTHHHHHHHHHHTTC---CEEEEECTTSCE--EEEECC-----C-CHHHHHHHHHHHH
T ss_pred EEEecccCHHHHHHHHHHHHHcCc---eEEEEECCCceE--EEEeCC-----C-CHHHHHHHHHHHh
Confidence 344566678899999999999999 699999888775 677753 2 3467887777643
No 77
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=26.92 E-value=1.4e+02 Score=22.28 Aligned_cols=46 Identities=7% Similarity=0.083 Sum_probs=33.1
Q ss_pred EEEEEEeCCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEEEe-CCCCC
Q 024465 189 SLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSY-GGAAL 241 (267)
Q Consensus 189 t~l~i~~~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v~d-~G~~l 241 (267)
..+.+...| +..+.+.|.+.|+.+...-.....+ -.||+.| +|..+
T Consensus 67 ~hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G---~~~~~~DPdG~~i 113 (144)
T 3r6a_A 67 TQATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTG---RNMTVRHSDGSVI 113 (144)
T ss_dssp CCEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTE---EEEEEECTTSCEE
T ss_pred eEEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCc---eEEEEECCCCCEE
Confidence 345555666 6678888999999998765554443 3589999 99866
No 78
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=25.51 E-value=34 Score=26.78 Aligned_cols=29 Identities=7% Similarity=0.292 Sum_probs=23.4
Q ss_pred EEEEEeC---CcccHHHHHHHHHHhCCccEEE
Q 024465 190 LLYIETA---DRPGLLVEIMKIIADVNVDVES 218 (267)
Q Consensus 190 ~l~i~~~---DRpGLL~~Itr~l~~~gl~I~~ 218 (267)
.|.|.+. |-.|+++.|+..|++.||.|-.
T Consensus 64 ~i~v~~~l~~~~vGilA~is~pLA~agIsif~ 95 (134)
T 1zhv_A 64 CFKFQGPFAFDETGIVLSVISPLSTNGIGIFV 95 (134)
T ss_dssp EEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE
T ss_pred EEEEecCCCccHHHHHHHHHHHHHhCCCCeEE
Confidence 4444433 8889999999999999999854
No 79
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=24.22 E-value=2.1e+02 Score=20.79 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHH
Q 024465 86 ALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTI 141 (267)
Q Consensus 86 LL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~~~~g~~l~~~~~~erl~~~L 141 (267)
++++++..+ ...+||+.|.|...++..+-.+.|.- .|. ++..++....|
T Consensus 37 iIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l--~G~----~~~~~~ai~~L 85 (106)
T 3dhx_A 37 LLSETARRF-NVNNNIISAQMDYAGGVKFGIMLTEM--HGT----QQDTQAAIAWL 85 (106)
T ss_dssp HHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEE--ESC----HHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCEEEEEEEeEEECCeeEEEEEEEE--eCC----HHHHHHHHHHH
Confidence 777777766 57799999999999998888788865 353 34445444443
No 80
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=24.06 E-value=40 Score=26.38 Aligned_cols=25 Identities=12% Similarity=0.247 Sum_probs=21.0
Q ss_pred EeCCcccHHHHHHHHHHhCCccEEE
Q 024465 194 ETADRPGLLVEIMKIIADVNVDVES 218 (267)
Q Consensus 194 ~~~DRpGLL~~Itr~l~~~gl~I~~ 218 (267)
...|-.|+++.|+..|++.||.|.-
T Consensus 80 ~~l~~vGi~a~is~~LA~agIsif~ 104 (133)
T 1zvp_A 80 SSLEAVGLTAAFATKLAEHGISANV 104 (133)
T ss_dssp C--CCSCHHHHHHHHHHHTTCCCEE
T ss_pred CCccHHHHHHHHHHHHHhCCCCcEE
Confidence 3468999999999999999999864
No 81
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=23.49 E-value=83 Score=29.49 Aligned_cols=48 Identities=19% Similarity=0.167 Sum_probs=35.6
Q ss_pred CeEEEEEEe---CCcccHHHHHHHHHHhCCccEEEEEEEecCCeeeeEEEEEe
Q 024465 187 KRSLLYIET---ADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSY 236 (267)
Q Consensus 187 ~~t~l~i~~---~DRpGLL~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v~d 236 (267)
+.+.|.|.+ .++||++++|.++|+++|++|....-.|.. ..-.|.|..
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse--~~Is~~V~~ 367 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE--TNISLVVSE 367 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT--CCEEEEEEG
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC--CEEEEEEec
Confidence 356788876 688999999999999999999887754422 233566643
No 82
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=23.11 E-value=1.2e+02 Score=22.01 Aligned_cols=37 Identities=5% Similarity=0.080 Sum_probs=27.1
Q ss_pred HHHHHHHHHhCCccEEEEEEEecCCeeeeEEEEEe-CCCCC
Q 024465 202 LVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSY-GGAAL 241 (267)
Q Consensus 202 L~~Itr~l~~~gl~I~~a~i~T~g~~a~d~F~v~d-~G~~l 241 (267)
+..+.+.|.+.|+.+...-....+++ .||+.| +|+.|
T Consensus 109 ~~~~~~~l~~~G~~~~~~~~~~~~g~---~~~~~DPdG~~i 146 (156)
T 3kol_A 109 FDRAVTVIGENKIAIAHGPVTRPTGR---GVYFYDPDGFMI 146 (156)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEC-CCE---EEEEECTTSCEE
T ss_pred HHHHHHHHHHCCCccccCceecCCcc---EEEEECCCCCEE
Confidence 66778889999999976555443332 788999 99865
No 83
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=21.95 E-value=2.1e+02 Score=26.59 Aligned_cols=49 Identities=8% Similarity=-0.008 Sum_probs=35.9
Q ss_pred CCeEEEEEEeC---CCccHHHHHHHHHHHCCceEEEEEEEEcCCeeEEEEEEEe
Q 024465 71 SDATIVQLSFG---DRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITR 121 (267)
Q Consensus 71 ~~~t~V~V~~~---DRpGLL~di~~~L~~~~lnI~~A~I~T~~~~~~d~F~I~~ 121 (267)
.+...|.|.+. ..||..+++..+|.+.|+||.--.--+..-. -.|.|..
T Consensus 372 ~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtSei~--Is~vV~~ 423 (446)
T 3tvi_A 372 PNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSSEIN--VIVGVET 423 (446)
T ss_dssp EEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSCTTE--EEEEEEG
T ss_pred CCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCCCce--EEEEEcH
Confidence 36778999875 5999999999999999999986543333222 2366654
No 84
>2yh5_A DAPX protein, BAMC; lipid binding protein, lipoprotein, BAM complex; 1.25A {Escherichia coli} PDB: 3sns_A
Probab=21.17 E-value=1.3e+02 Score=23.14 Aligned_cols=68 Identities=10% Similarity=0.050 Sum_probs=41.1
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCcc--EEEEEEEecCCeeeeEEEEEe-CCCCCChHHHHHHHHHHHHHcCCC
Q 024465 188 RSLLYIETADRPGLLVEIMKIIADVNVD--VESAEIDTEGLVAKDKFHVSY-GGAALNSSLSQVLVNCLRYYLRRP 260 (267)
Q Consensus 188 ~t~l~i~~~DRpGLL~~Itr~l~~~gl~--I~~a~i~T~g~~a~d~F~v~d-~G~~l~~~~~~~L~~~L~~~l~~~ 260 (267)
.+.+....+| +|+++.+. ..+..+. -....+...|++ -...|.| .|+|++++..+.|...|...|.+-
T Consensus 50 ~y~V~Y~~~~-~gf~~~lg--~~~~~~~~~~Y~i~v~~~g~~--t~V~v~d~~G~p~~~~~a~~ll~~L~~~l~~~ 120 (127)
T 2yh5_A 50 NMAVTYKPLS-DSDWQELG--ASDPGLASGDYKLQVGDLDNR--SSLQFIDPKGHTLTQSQNDALVAVFQAAFSKL 120 (127)
T ss_dssp EEEEEECCCC-HHHHHHHT--SCCCCCCSEEEEEEEEEETTE--EEEEEECTTSCBCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCC-cchHHHhc--CCCccCCCCCEEEEEEeCCCc--eEEEEECCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4445544444 58888771 1111111 233445555665 3455677 999999987788888888877643
Done!