Query 024468
Match_columns 267
No_of_seqs 155 out of 1059
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 08:45:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024468.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024468hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ico_A 6PGL, 6-phosphogluconol 100.0 2.4E-67 8.1E-72 466.5 25.2 242 8-261 21-267 (268)
2 3tx2_A Probable 6-phosphogluco 100.0 2.3E-67 7.9E-72 463.0 24.1 241 8-260 5-250 (251)
3 3oc6_A 6-phosphogluconolactona 100.0 2.7E-67 9.3E-72 461.7 24.4 239 8-260 5-248 (248)
4 3eb9_A 6-phosphogluconolactona 100.0 2.4E-64 8.3E-69 447.2 24.0 248 9-262 3-265 (266)
5 3hn6_A Glucosamine-6-phosphate 100.0 6.9E-63 2.4E-67 442.1 25.5 238 6-262 17-270 (289)
6 3css_A 6-phosphogluconolactona 100.0 1.8E-62 6.1E-67 435.7 19.1 250 6-261 1-266 (267)
7 3lwd_A 6-phosphogluconolactona 100.0 6.7E-61 2.3E-65 415.5 20.0 218 11-251 3-225 (226)
8 3nwp_A 6-phosphogluconolactona 100.0 4.3E-60 1.5E-64 412.3 22.4 219 10-251 5-232 (233)
9 1y89_A DEVB protein; structura 100.0 7.7E-60 2.6E-64 412.3 23.1 234 11-260 2-237 (238)
10 3lhi_A Putative 6-phosphogluco 100.0 1.4E-59 4.6E-64 409.1 21.8 217 11-251 3-231 (232)
11 3e15_A Glucose-6-phosphate 1-d 100.0 1.5E-59 5.2E-64 422.5 21.1 236 7-257 23-296 (312)
12 1vl1_A 6PGL, 6-phosphogluconol 100.0 2.3E-59 8E-64 407.4 19.9 218 11-254 14-232 (232)
13 1ne7_A Glucosamine-6-phosphate 100.0 8.8E-53 3E-57 377.4 24.4 232 11-261 1-248 (289)
14 2bkx_A Glucosamine-6-phosphate 100.0 1.5E-51 5.2E-56 360.0 23.0 229 11-261 1-242 (242)
15 1fs5_A Glucosamine-6-phosphate 100.0 2.4E-51 8.1E-56 363.8 24.3 232 11-261 1-248 (266)
16 2ri0_A Glucosamine-6-phosphate 100.0 6.7E-49 2.3E-53 341.8 24.3 220 10-260 1-234 (234)
17 2okg_A Central glycolytic gene 99.9 1.1E-23 3.7E-28 185.3 10.1 203 12-261 24-252 (255)
18 2r5f_A Transcriptional regulat 99.9 2.2E-22 7.5E-27 177.8 13.4 195 20-260 41-262 (264)
19 2gnp_A Transcriptional regulat 99.9 2.4E-21 8.3E-26 171.2 11.4 199 20-261 41-260 (266)
20 2o0m_A Transcriptional regulat 99.8 1.2E-20 4.2E-25 172.5 6.2 200 19-261 124-340 (345)
21 2w48_A Sorbitol operon regulat 99.8 1.3E-19 4.6E-24 163.6 12.8 198 19-260 92-313 (315)
22 3nze_A Putative transcriptiona 99.6 2E-14 6.9E-19 126.9 13.6 199 20-261 36-262 (267)
23 3efb_A Probable SOR-operon reg 99.3 1.1E-11 3.9E-16 109.1 12.3 197 21-260 45-264 (266)
24 3kv1_A Transcriptional repress 99.3 1.7E-11 5.8E-16 108.1 9.6 196 20-260 39-259 (267)
25 1t35_A Hypothetical protein YV 70.5 6.2 0.00021 32.1 5.2 46 37-83 93-139 (191)
26 1wy5_A TILS, hypothetical UPF0 70.5 35 0.0012 29.5 10.5 45 38-83 21-65 (317)
27 1sur_A PAPS reductase; assimil 55.0 15 0.00052 29.8 4.9 66 31-108 33-99 (215)
28 3fe2_A Probable ATP-dependent 51.2 71 0.0024 25.8 8.5 65 11-83 104-186 (242)
29 2oq2_A Phosphoadenosine phosph 47.4 26 0.00088 29.6 5.2 62 20-84 18-81 (261)
30 1wxi_A NH(3)-dependent NAD(+) 45.6 18 0.00062 31.0 4.0 30 18-51 18-50 (275)
31 1wek_A Hypothetical protein TT 43.2 22 0.00075 29.5 4.0 46 37-83 127-173 (217)
32 3fiu_A NH(3)-dependent NAD(+) 40.9 23 0.00079 29.8 3.8 43 18-62 8-50 (249)
33 1ydh_A AT5G11950; structural g 40.3 13 0.00046 30.8 2.2 46 37-83 101-147 (216)
34 3qua_A Putative uncharacterize 39.5 14 0.00049 30.2 2.2 45 38-83 114-159 (199)
35 1xng_A NH(3)-dependent NAD(+) 37.6 34 0.0012 28.9 4.4 58 18-82 4-61 (268)
36 1kqp_A NAD+ synthase, NH(3)-de 36.6 38 0.0013 28.8 4.6 30 18-51 17-48 (271)
37 3p52_A NH(3)-dependent NAD(+) 36.3 55 0.0019 27.4 5.5 57 18-83 5-63 (249)
38 2o8v_A Phosphoadenosine phosph 35.3 45 0.0015 27.8 4.8 46 32-83 35-81 (252)
39 2dpl_A GMP synthetase, GMP syn 31.4 49 0.0017 28.7 4.5 69 29-108 9-77 (308)
40 3q4g_A NH(3)-dependent NAD(+) 30.0 41 0.0014 28.9 3.7 32 18-51 19-50 (279)
41 1wrb_A DJVLGB; RNA helicase, D 29.5 1.6E+02 0.0055 23.7 7.3 65 11-83 102-184 (253)
42 1q0u_A Bstdead; DEAD protein, 28.4 95 0.0032 24.5 5.6 68 12-83 75-160 (219)
43 3bor_A Human initiation factor 28.1 1.5E+02 0.0052 23.7 6.9 28 53-83 156-183 (237)
44 3dpi_A NAD+ synthetase; ssgcid 28.0 57 0.0019 28.2 4.2 32 18-51 25-56 (285)
45 1vec_A ATP-dependent RNA helic 27.6 1.8E+02 0.0063 22.2 7.1 95 12-120 74-188 (206)
46 2e18_A NH(3)-dependent NAD(+) 27.4 53 0.0018 27.4 3.9 54 19-82 6-59 (257)
47 3iuy_A Probable ATP-dependent 26.0 1.7E+02 0.0059 23.0 6.8 63 12-83 97-177 (228)
48 2i4i_A ATP-dependent RNA helic 24.8 1.4E+02 0.0049 25.8 6.5 64 12-83 104-185 (417)
49 3ca8_A Protein YDCF; two domai 23.5 1.7E+02 0.0058 24.7 6.4 46 88-134 94-139 (266)
50 2ywb_A GMP synthase [glutamine 23.3 1.8E+02 0.006 26.9 7.0 48 32-86 201-248 (503)
51 1q15_A CARA; CMPR, (2S,5S)-5-c 22.8 3.2E+02 0.011 25.1 8.7 75 17-100 214-288 (503)
52 3ber_A Probable ATP-dependent 22.3 1.9E+02 0.0067 23.4 6.5 65 12-83 114-196 (249)
53 3uow_A GMP synthetase; structu 22.1 74 0.0025 30.1 4.2 55 41-100 255-309 (556)
54 2j0s_A ATP-dependent RNA helic 21.5 2.2E+02 0.0076 24.5 7.1 66 10-83 106-189 (410)
55 3eno_A Putative O-sialoglycopr 21.4 79 0.0027 27.7 4.0 38 24-61 231-269 (334)
56 3fmo_B ATP-dependent RNA helic 21.1 1.6E+02 0.0054 24.9 5.8 29 53-83 217-245 (300)
57 2oxc_A Probable ATP-dependent 21.0 1.7E+02 0.0058 23.2 5.8 65 11-83 94-176 (230)
58 1qde_A EIF4A, translation init 20.9 1.9E+02 0.0064 22.6 5.9 65 11-83 84-165 (224)
59 3sbx_A Putative uncharacterize 20.8 75 0.0026 25.6 3.4 44 39-83 106-150 (189)
60 2vxo_A GMP synthase [glutamine 20.1 2.2E+02 0.0076 27.6 7.2 61 30-95 230-290 (697)
61 2l32_A Small archaeal modifier 20.1 68 0.0023 21.6 2.6 37 45-88 14-50 (74)
No 1
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-67 Score=466.53 Aligned_cols=242 Identities=33% Similarity=0.511 Sum_probs=220.0
Q ss_pred CCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCC
Q 024468 8 RDRGELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKN 87 (267)
Q Consensus 8 ~~~~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~ 87 (267)
+++|++++|+|++++++++|+.|++.++++++++++++|+||||+||..+|+.|.... .++||+||++||+||||||.+
T Consensus 21 ~~~m~i~v~~~~~~l~~~~A~~i~~~i~~ai~~~~~~~l~LsgGstP~~~y~~L~~~~-~~idw~~v~~f~~DEr~vp~~ 99 (268)
T 3ico_A 21 SMSSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQA-QQIEWSKVHLFWGDERYVPED 99 (268)
T ss_dssp ---CEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHHHG-GGSCGGGEEEEESEEECSCTT
T ss_pred ccccceEecCCcchhhhhhcchhhhHhHHHHHhcCceEEEEecCCchhHHHHHHHHHh-hhhhheeeEEeecccccCCCC
Confidence 4789999999999999999999999999999999999999999999999997665422 579999999999999999999
Q ss_pred ChhhHHHHHHHHhcccCCCCCCCCeEeCCCC-----CCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCC
Q 024468 88 HSDSNYKLAKEGLLSKQVPIVPSHVHSINDS-----LSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSD 162 (267)
Q Consensus 88 ~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~-----~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~D 162 (267)
|++||+++|+++||+++ +++++|+|++++. .+++++|++|++.|++.++.+ ++.|+||+++||||+|
T Consensus 100 ~~~Sn~~~~~~~Ll~~v-~i~~~~i~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~-------~~~p~~Dl~lLGmG~D 171 (268)
T 3ico_A 100 DDERNLKQARRALLNHV-DIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPG-------DPAPNFDVHLLGMGPE 171 (268)
T ss_dssp CTTCHHHHHHHHTGGGS-CCCGGGBCCCCCTTSTTTTCHHHHHHHHHHHHHHHSSTT-------CSSCCCSEEEECCCTT
T ss_pred cchhHHHHHHHHHHhcc-CCcccccccccccCCCcccchhHHHHHHHHHHhhccCCC-------CCCCCcceEEeccCCc
Confidence 99999999999999999 9999999999875 589999999999999875321 1246899999999999
Q ss_pred CceeccCCCCCccccccceEEeecCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCccccccccc
Q 024468 163 GHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPSLPARMAQ 242 (267)
Q Consensus 163 GHiAslfP~~~~~~~~~~~v~~~~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~~Pas~l~ 242 (267)
||||||||+++.+.+++++++.+.+++++|++|||||+++|++||+|+|+++|++|++++++++++++ +.++|+|+|+
T Consensus 172 GH~as~fPg~~~~~~t~~~vv~~~~~~~~P~~rITlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~--~~~~Pas~l~ 249 (268)
T 3ico_A 172 GHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGAD--PVSVPAAGAV 249 (268)
T ss_dssp CCBTTBCTTCHHHHCSSCSEEEESCCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCC--TTTSGGGGCC
T ss_pred ccccccCCCChhhhhhceEEEEecCCCCCCCceEEEechhhhccceEEEEecCCCchHHHHHHhcCCC--Cccccccccc
Confidence 99999999999887776777778778899999999999999999999999999999999999999876 7899999999
Q ss_pred cCCCeEEEEecHHHHhhcc
Q 024468 243 PTNGKLVWFLDKPAASKLQ 261 (267)
Q Consensus 243 ~~~~~~~~~~D~~Aa~~l~ 261 (267)
.|++++||+|++|+++|.
T Consensus 250 -~h~~~~~~lD~~Aa~~L~ 267 (268)
T 3ico_A 250 -GRQNTLWLLDRDAAAKLP 267 (268)
T ss_dssp -CSSEEEEEEEHHHHTTCC
T ss_pred -cccceEEEecchhhhhCC
Confidence 699999999999999885
No 2
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=100.00 E-value=2.3e-67 Score=462.96 Aligned_cols=241 Identities=34% Similarity=0.523 Sum_probs=220.5
Q ss_pred CCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCC
Q 024468 8 RDRGELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKN 87 (267)
Q Consensus 8 ~~~~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~ 87 (267)
++.+++++|+|++++++++|++|++.++++++++++++|+||||+||..+|+.|.... .++||+||++||+||||||++
T Consensus 5 m~~~~i~i~~~~~~l~~~~A~~i~~~i~~a~~~~~~~~l~LsgGstP~~~y~~L~~~~-~~idw~~v~~f~~DEr~vp~~ 83 (251)
T 3tx2_A 5 MSETIIEKYADTDALVTAAGDRLASAITGALAERGKAMIVLTGGGTGIALLKHLRDVA-SGLDWTNVHVFWGDDRYVPKT 83 (251)
T ss_dssp CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHHHH-TTSCGGGEEEEESEEESSCTT
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhhc-cCCCCceeEEEeeeeccCCCC
Confidence 3668899999999999999999999999999999999999999999999997665422 579999999999999999999
Q ss_pred ChhhHHHHHHHHhcccCCCCCCCCeEeCCCC-----CCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCC
Q 024468 88 HSDSNYKLAKEGLLSKQVPIVPSHVHSINDS-----LSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSD 162 (267)
Q Consensus 88 ~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~-----~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~D 162 (267)
|++||+++|+++||+++ ++|++|+|++++. .|++++|++|+++|++.++.. +..|+||+++||||+|
T Consensus 84 ~~~Sn~~~~~~~ll~~v-~i~~~~i~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~-------~~~~~~Dl~lLG~G~D 155 (251)
T 3tx2_A 84 DPERNAWQAWEALLEHV-NFPLRNMHAMPNSESEYGTDLDAAALAYEQLLAANAEPG-------QDCPAFDVHLLGMGGE 155 (251)
T ss_dssp CTTCHHHHHHHHTGGGS-CCCGGGBCCCCCTTSSCTTCHHHHHHHHHHHHHHTSCTT-------CSSCCCSEEEECCCTT
T ss_pred ChHHHHHHHHHHhhccC-CCCHHHEEECCCcccccCCCHHHHHHHHHHHHHhhhccc-------cCCCCCCEEEECCCCC
Confidence 99999999999999999 9999999999875 389999999999999865431 1247899999999999
Q ss_pred CceeccCCCCCccccccceEEeecCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCccccccccc
Q 024468 163 GHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPSLPARMAQ 242 (267)
Q Consensus 163 GHiAslfP~~~~~~~~~~~v~~~~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~~Pas~l~ 242 (267)
||||||||+++.+.++.++++.+.+++++|++|||||+++|++||+|+|+++|++|++++++++++++ +.++|+|+|+
T Consensus 156 GH~as~fPg~~~~~~~~~~vv~~~~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~--~~~~Pas~l~ 233 (251)
T 3tx2_A 156 GHINSLFPHTDAVKETQRLVVAVPDSPKPPPQRITLTLPAIQRSREVWLVVSGEAKADAVAAAVGGAD--PVDVPAAGAK 233 (251)
T ss_dssp CCBTTBCTTCHHHHCSSCSEEEESCCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCC--TTTSGGGGCC
T ss_pred CceEEcCCcChhhccCcceEEEecCCCCCCCcEEEECHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCC--CCCCChHHhc
Confidence 99999999999887776778778788999999999999999999999999999999999999999876 7899999999
Q ss_pred cCCCeEEEEecHHHHhhc
Q 024468 243 PTNGKLVWFLDKPAASKL 260 (267)
Q Consensus 243 ~~~~~~~~~~D~~Aa~~l 260 (267)
.|++++||+|++|+++|
T Consensus 234 -~h~~~~~~~D~~Aa~~L 250 (251)
T 3tx2_A 234 -GIERTVWLLDEAAASQL 250 (251)
T ss_dssp -CSSEEEEEEETTTTTTC
T ss_pred -cCCCEEEEEeHHHHhhc
Confidence 68999999999999986
No 3
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.7e-67 Score=461.73 Aligned_cols=239 Identities=36% Similarity=0.551 Sum_probs=219.8
Q ss_pred CCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCC
Q 024468 8 RDRGELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKN 87 (267)
Q Consensus 8 ~~~~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~ 87 (267)
++.+++++|+|++++++++|++|++.++++++++++++|+||||+||..+|+.|.... .++||+||++||+||||||++
T Consensus 5 ~~~~~i~i~~~~~~l~~~~A~~i~~~i~~~~~~~~~~~l~LsgGstP~~~y~~L~~~~-~~idw~~v~~f~~DEr~vp~~ 83 (248)
T 3oc6_A 5 MSDTVIERHADTAALVAAAGDRLVDAISSAIGERGQATIVLTGGGTGIGLLKRVRERS-GEIDWSKVHIYWGDERFVPQD 83 (248)
T ss_dssp -CEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHHTG-GGSCGGGEEEEESEEECSCTT
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEECCCccHHHHHHHHHhhc-cCCCcceEEEEEeeeccCCCC
Confidence 4778999999999999999999999999999999999999999999999997665422 579999999999999999999
Q ss_pred ChhhHHHHHHHHhcccCCCCCCCCeEeCCCC-----CCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCC
Q 024468 88 HSDSNYKLAKEGLLSKQVPIVPSHVHSINDS-----LSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSD 162 (267)
Q Consensus 88 ~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~-----~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~D 162 (267)
|++||+++|+++||+++ +++++|+|++++. .+++++|++|++.|++.++. ..|+||+++||||+|
T Consensus 84 ~~~Sn~~~~~~~ll~~v-~i~~~~i~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~---------~~~~~Dl~lLG~G~d 153 (248)
T 3oc6_A 84 DDERNDKQAREALLDHI-GIPPVNVHAMAASDGEFGDDLEAAAAGYAQLLSANFDS---------SVPGFDVHLLGMGGE 153 (248)
T ss_dssp CTTCHHHHHHHHTGGGS-CCCGGGBCCCCCTTSTTTTCHHHHHHHHHHHHHHHHTS---------SSCSEEEEEECCCTT
T ss_pred ChHHHHHHHHHHhhccC-CCChhhEEecCCcccccCCCHHHHHHHHHHHHHHhccc---------CCCCCCEEEECCCCC
Confidence 99999999999999999 9999999999875 38999999999999986541 247899999999999
Q ss_pred CceeccCCCCCccccccceEEeecCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCccccccccc
Q 024468 163 GHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPSLPARMAQ 242 (267)
Q Consensus 163 GHiAslfP~~~~~~~~~~~v~~~~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~~Pas~l~ 242 (267)
||||||||+++.+.++.++++.+.+++++|++|||||+++|++||+|+|+++|++|+++++++++++. +.++|+|+|+
T Consensus 154 GH~aslfPg~~~~~~~~~~vv~~~~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~--~~~~Pas~l~ 231 (248)
T 3oc6_A 154 GHVNSLFPDTDAVRETERLVVGVSDSPKPPPRRITLTLPAVQNSREVWLVVSGEAKADAVAAAVGGAD--PVDIPAAGAV 231 (248)
T ss_dssp CCBTTBCTTCHHHHCSSCSEEEESCCSSSSSCEEEECHHHHTTEEEEEEEECSGGGHHHHHHHHHTCC--TTTSGGGGCC
T ss_pred CCEEEcCCCChhhccCcceEEEecCCCCCCCcEEEcCHHHHHhhCeEEEEEeCHHHHHHHHHHHcCCC--CCCCChHHhc
Confidence 99999999999887776778778788899999999999999999999999999999999999999876 7899999999
Q ss_pred cCCCeEEEEecHHHHhhc
Q 024468 243 PTNGKLVWFLDKPAASKL 260 (267)
Q Consensus 243 ~~~~~~~~~~D~~Aa~~l 260 (267)
.|++++||+|++|+++|
T Consensus 232 -~h~~~~~~~D~~Aa~~L 248 (248)
T 3oc6_A 232 -GRERTVWLVDEAAAAKL 248 (248)
T ss_dssp -CSSEEEEEEETTTTTTC
T ss_pred -cCCCEEEEEchHHhhCC
Confidence 68999999999999875
No 4
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=100.00 E-value=2.4e-64 Score=447.20 Aligned_cols=248 Identities=29% Similarity=0.376 Sum_probs=212.2
Q ss_pred CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCC-CceeEEeeceeccCCC
Q 024468 9 DRGELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDW-AKWYIFWADERVVAKN 87 (267)
Q Consensus 9 ~~~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w-~~v~~f~~DEr~vp~~ 87 (267)
.+.++++|+|++++++++|++|++.++++++++++++|+||||+||+.+|+.|....+..+|| +||++||+||||||.+
T Consensus 3 ~~~~i~i~~~~~~l~~~~A~~i~~~i~~~i~~~~~~~l~LsgGstP~~ly~~L~~~~~~~idw~~~v~~f~~DEr~vp~~ 82 (266)
T 3eb9_A 3 FKPTISVHATPQELSAAGCRKIVEIIEASGSQQWPLSIALAGGSTPKMTYARLHDEHLNLLREKRALRFFMGDERMVPAD 82 (266)
T ss_dssp CCCEEEEESSHHHHHHHHHHHHHHHHHHHCGGGCSEEEEECCSHHHHHHHHHHHHHHHHHHTTSCCEEEEESEEESSCTT
T ss_pred CCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHHHHhhcCCChHHcEEEEeeeeeccCCC
Confidence 367899999999999999999999999999999999999999999999998665322237999 9999999999999999
Q ss_pred ChhhHHHHHHHHhcccCCCCCCCCeEeCCCC-CCH---------HHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEe
Q 024468 88 HSDSNYKLAKEGLLSKQVPIVPSHVHSINDS-LSA---------EEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILL 157 (267)
Q Consensus 88 ~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~-~d~---------~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lL 157 (267)
|++||+++|+++||++ +|++|+|++++. .++ +++|++|+++|+++++..... ......|+||+++|
T Consensus 83 ~~~Sn~~~~~~~ll~~---i~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~~~~-g~~~~~p~~Dl~lL 158 (266)
T 3eb9_A 83 STDSNYNMAREVLLHD---IPDDLVFPFDTSAVTPSAEATSADAMRVAEAYGKQLASLLPLKSVG-EAGPKVPVFDVVLL 158 (266)
T ss_dssp STTCHHHHHHHHTGGG---SCGGGEECCCCTTCCTTSCCCHHHHHHHHHHHHHHHHHHSCEEETT-TTSCEEECCSEEEE
T ss_pred ChHHHHHHHHHHhhcC---CCHHHEEeCCCccCChhhccccCcHHHHHHHHHHHHHHhccccccc-cccccCCCCCEEEE
Confidence 9999999999999994 578999999988 478 999999999999874211000 00000247999999
Q ss_pred ccCCCCceeccCCCCCccccc--cceEEeecCCC--CCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCC
Q 024468 158 GMGSDGHVASLFPNHSVLDVK--NQWVSFITDSP--KPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNC 233 (267)
Q Consensus 158 G~G~DGHiAslfP~~~~~~~~--~~~v~~~~~~~--~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~ 233 (267)
|||+||||||||||++.+.+. +++|....++| ++|++|||||+++|++||+|+|+++|++|+++++++++++. +
T Consensus 159 GmG~DGH~as~fPg~~~l~~~~~~~~v~~~~~~~~~~~P~~rITlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~--~ 236 (266)
T 3eb9_A 159 GLGSDGHTASIFPGSQAEKETDGKVVVSVGFPSETMKPKVWRVTLSPATIMQARNVIVLATGAEKKWVVDGILADTA--H 236 (266)
T ss_dssp CCCTTSCBTTBCTTCSGGGCCSSSCSEEEECCCTTCSSCSCEEEECHHHHHTCSEEEEEECCGGGHHHHHHHHCSSC--S
T ss_pred ccCCCCCeeecCCCCcccccCCCccEEEecCCCcccCCCCeEEEcCHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCC--C
Confidence 999999999999999987765 67776543367 89999999999999999999999999999999999999987 6
Q ss_pred ccccccccccCCCeEEEEecHHHHhhccc
Q 024468 234 PSLPARMAQPTNGKLVWFLDKPAASKLQS 262 (267)
Q Consensus 234 ~~~Pas~l~~~~~~~~~~~D~~Aa~~l~~ 262 (267)
..+|+|+|+..|++++||+|++|+++|++
T Consensus 237 ~~~pAs~l~~~h~~~~~~~D~~Aa~~L~~ 265 (266)
T 3eb9_A 237 KAPVARFLRGCEGNVSFLLDKEIAENLAK 265 (266)
T ss_dssp SCCGGGGGGGCSSEEEEEEEHHHHC----
T ss_pred ccchhHHhcCCCCCEEEEEcHHHhccccc
Confidence 78999999954999999999999999875
No 5
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=100.00 E-value=6.9e-63 Score=442.06 Aligned_cols=238 Identities=23% Similarity=0.261 Sum_probs=212.6
Q ss_pred CCCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHHh-cCcEEEEEcCCChHHHHHHHhc-ccCCCCCCCCceeEEeeceec
Q 024468 6 VHRDRGELRIHESVEELSTNLADYIADLSEASVKE-RGVFAIALSGGSLIGLMGKLCE-APYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 6 ~~~~~~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~-~~~~~l~lsGGstp~~l~~ll~-~~~~~~i~w~~v~~f~~DEr~ 83 (267)
+..+.|++++|+|++++++++|++|++.+++++.+ +++++|+||||+||..+|+.|. .+++.++||++|++|++|||+
T Consensus 17 ~~~~~M~i~i~~~~~~la~~aA~~i~~~i~~a~~~~~~~~~l~LsgGsTP~~~y~~L~~~~~~~~idw~~v~~f~~DEr~ 96 (289)
T 3hn6_A 17 QGPGSMRLIIRPTYEDISKWAANHVAQKINEFSPTKENPFILGLPTGSSPIGMYKNLIELNKNKKISFQNVITFNMDEYI 96 (289)
T ss_dssp --CCSCEEEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSSTTHHHHHHHHHHHHTTSCCCTTEEEEESEEES
T ss_pred cCCCceEEEEECCHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCCccHHHHHHHHHHhHhhcCCCchheEEEeCccee
Confidence 45677999999999999999999999999888865 4579999999999999997654 444568999999999999999
Q ss_pred -cCCCChhhHHHHHHHHhcccCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCC
Q 024468 84 -VAKNHSDSNYKLAKEGLLSKQVPIVPSHVHSINDS-LSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGS 161 (267)
Q Consensus 84 -vp~~~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~-~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~ 161 (267)
||++|++||+++|+++||+++ ++|++|+|.+++. .|++++|++|++.|++. ++||+++||||+
T Consensus 97 gvp~~~~~Sn~~~~~~~Ll~~v-~i~~~~i~~~~~~~~d~~~~a~~Ye~~i~~~--------------~~~Dl~lLGmG~ 161 (289)
T 3hn6_A 97 GIEENHPESYHSFMWNNFFSHI-DIKKENINILNGNASNLKKECEEYEKKIKSF--------------GGIMLFVGGIGP 161 (289)
T ss_dssp SCCTTSTTSHHHHHHHHTGGGS-CCCGGGEECCCTTCSSHHHHHHHHHHHHHHT--------------TSCSEEEEECCT
T ss_pred cCCCCcHHHHHHHHHHHhhccC-CCCHHHeecCCCCCCCHHHHHHHHHHHHhhc--------------CCCCEEEEccCC
Confidence 999999999999999999999 9999999999986 59999999999999973 689999999999
Q ss_pred CCceeccCCCCCccccccceEEee------------cCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCC
Q 024468 162 DGHVASLFPNHSVLDVKNQWVSFI------------TDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDL 229 (267)
Q Consensus 162 DGHiAslfP~~~~~~~~~~~v~~~------------~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~ 229 (267)
|||||||||++++ .+.+++|... .+.+++|++|||||+++|++||+|+|+++|++|+++++++++++
T Consensus 162 DGH~asnfPg~~l-~~~t~~v~l~~~t~~~n~~~f~~~~~~~P~~rITl~l~~I~~Ar~i~lla~G~~Ka~av~~~l~g~ 240 (289)
T 3hn6_A 162 DGHIAFNEPGSSL-TSRTRIKTLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKG 240 (289)
T ss_dssp TSCBTTBCTTCCT-TCCSEEEECCHHHHHHHGGGTTTCTTTSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSC
T ss_pred CCceeecCCCCcc-cccceEEeccHHHHHHhhhhccCCCCCCCCeEEECCHHHHHccCeEEEEEcChHHHHHHHHHHhCC
Confidence 9999999999864 4445555421 25688999999999999999999999999999999999999998
Q ss_pred CCCCccccccccccCCCeEEEEecHHHHhhccc
Q 024468 230 GPNCPSLPARMAQPTNGKLVWFLDKPAASKLQS 262 (267)
Q Consensus 230 ~~~~~~~Pas~l~~~~~~~~~~~D~~Aa~~l~~ 262 (267)
. +.++|+|.|+ .|++++|++|++|+++|+.
T Consensus 241 ~--~~~~Pas~l~-~h~~~~~~lD~~Aa~~L~~ 270 (289)
T 3hn6_A 241 V--NHMWTISALQ-LHKNAIIVSDKNATYELKV 270 (289)
T ss_dssp C--CTTSGGGGGG-GCSSEEEEEESGGGTTSBH
T ss_pred C--CcccChHHHc-cCCCEEEEEcHHHHccccH
Confidence 7 6899999999 6999999999999999864
No 6
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=100.00 E-value=1.8e-62 Score=435.67 Aligned_cols=250 Identities=25% Similarity=0.340 Sum_probs=216.4
Q ss_pred CCCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccC
Q 024468 6 VHRDRGELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVA 85 (267)
Q Consensus 6 ~~~~~~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp 85 (267)
|+.+.|++++|+|++++++++|++|.+.+++++++++.++|+||||+||..+|+.|...+...++|++|++||+||||||
T Consensus 1 m~~~~~~~~~~~~~~~l~~~aA~~i~~~i~~a~~~~~~~~l~LsgGstp~~ly~~L~~~~~~~i~w~~v~~f~~DEr~vp 80 (267)
T 3css_A 1 MTSFAPTVKICENLSQMSFAAREVILAAIDARVDKSVPVVLALSGGSTPKRLYEELHEKDLALLQQHAVQFILGDERLLS 80 (267)
T ss_dssp ---CCCEEEECSSHHHHHHHHHHHHHHHHHTCSSTTSCEEEEECCSSTTHHHHHHHHHHSHHHHHTTCEEEEESEEESSC
T ss_pred CCCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHHHhcccCCChhHeEEEeeeeeccC
Confidence 45677999999999999999999999999999999999999999999999999766532334699999999999999999
Q ss_pred CCChhhHHHHHHHHhcccCCCCCCCCeEeCCCCC------------CHH-HHHHHHHHHHHHhhhhccccccCCCCCCcc
Q 024468 86 KNHSDSNYKLAKEGLLSKQVPIVPSHVHSINDSL------------SAE-EAADEYEFDIRQLVKTRMVCVSDISDCPKF 152 (267)
Q Consensus 86 ~~~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~~------------d~~-~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~ 152 (267)
.+|++||+++++++||+++ + ++|+|++++.. +++ ++|++|++.|++.++.+.. ....++.|+|
T Consensus 81 ~~~~~Sn~~~~~~~ll~~~-~--~~~i~~~~~~~~~~~~~~~~~~~~~e~~~a~~Ye~~l~~~~~~~~~-~~~~~~~p~~ 156 (267)
T 3css_A 81 EDDEQSNFSMATKALLRDV-P--SSDVISIDRRAALATSKDEKGGLDGAWAVAQDYEVKLLNCLPCKQI-NGTAKSVPVV 156 (267)
T ss_dssp TTSTTSHHHHHHHHTGGGS-C--GGGBCCCCCHHHHTTTTCTTTTHHHHHHHHHHHHHHHHHHSCEEEC-TTSSCEEECC
T ss_pred CCCHHHHHHHHHHHHhccC-C--HHHEEeCCCchhccccccccccCChhHHHHHHHHHHHHHhcCcccc-ccccCCCCCC
Confidence 9999999999999999999 7 67999998765 788 9999999999986420000 0000013579
Q ss_pred eEEEeccCCCCceeccCCCCCccccccceEE-ee-cCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCC
Q 024468 153 DLILLGMGSDGHVASLFPNHSVLDVKNQWVS-FI-TDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLG 230 (267)
Q Consensus 153 Dl~lLG~G~DGHiAslfP~~~~~~~~~~~v~-~~-~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~ 230 (267)
|+++||||+|||||||||+++.+.+++++|. .+ .+++++|++|||||+++|++||+|+|+++|++|++++++++++++
T Consensus 157 Dl~lLGiG~dGH~aslfP~~~~L~~~~~~v~~~~~~~~~~~p~~rITltl~~I~~A~~v~~la~G~~Ka~av~~~l~g~~ 236 (267)
T 3css_A 157 DIVLLGFGSDGHTASIFPDSVAATDEEHVVSVSFPSPTMSPKVWRVTLSKTVIQYAKHVVVLAAGKDKNWVVRGVLSESP 236 (267)
T ss_dssp SEEEEECCTTSCBTTBCTTSGGGGCCSCSEEEECCCTTCSSCSCEEEECHHHHHHCSEEEEEECSGGGHHHHHHHHCSSC
T ss_pred CEEEECCCCCccceeCCCCCcccCCCCcEEEeecccCCCCCCCceEECCHHHHHcCCEEEEEEeCHHHHHHHHHHHcCCC
Confidence 9999999999999999999998877778877 66 577899999999999999999999999999999999999999976
Q ss_pred CCCccccccccc-cCCCeEEEEecHHHHhhcc
Q 024468 231 PNCPSLPARMAQ-PTNGKLVWFLDKPAASKLQ 261 (267)
Q Consensus 231 ~~~~~~Pas~l~-~~~~~~~~~~D~~Aa~~l~ 261 (267)
+.++|+|+|+ ..|++++||+|++|+++|.
T Consensus 237 --~~~~Pas~l~~~~h~~~~~~~D~~Aa~~l~ 266 (267)
T 3css_A 237 --TDPLPVSRFLRDCRGSVTLLLDPGAGEGVC 266 (267)
T ss_dssp --CSSCCGGGGGGGCSSEEEEEECTTTTTTTC
T ss_pred --CCcCCHHHhccCCCCCEEEEECHHHHhhcc
Confidence 6789999999 6689999999999999874
No 7
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=100.00 E-value=6.7e-61 Score=415.48 Aligned_cols=218 Identities=28% Similarity=0.401 Sum_probs=195.7
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChh
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSD 90 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~ 90 (267)
|+ ++|+|++++++++|+.|++.++++++++++++|+||||+||..+|+.|.. ..+||+||++|++||||||++|++
T Consensus 3 m~-~i~~~~~~l~~~~A~~i~~~i~~~i~~~~~~~l~LsgGstp~~~y~~L~~---~~idw~~v~~f~~DEr~vp~~~~~ 78 (226)
T 3lwd_A 3 MN-TTQEGRQRLAERLADTVAQALEADLAKRERALLVVSGGSTPKPFFTSLAA---KALPWARVDVTLADERWVTADDAD 78 (226)
T ss_dssp -C-HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCEEEEECCSSTTHHHHHHHHT---SCSCGGGEEEEESEEESSCTTSTT
T ss_pred Cc-eecCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHHh---cCCCchhEEEEEeeecccCCCChH
Confidence 67 89999999999999999999999999999999999999999999987765 479999999999999999999999
Q ss_pred hHHHHHHHHhcccCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhhhccccccCCCCCC-cceEEEeccCCCCceecc
Q 024468 91 SNYKLAKEGLLSKQVPIVPSHVHSINDS-LSAEEAADEYEFDIRQLVKTRMVCVSDISDCP-KFDLILLGMGSDGHVASL 168 (267)
Q Consensus 91 Sn~~~l~~~ll~~~~~i~~~~~~~~~~~-~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~-~~Dl~lLG~G~DGHiAsl 168 (267)
||+++|+++||++. ++++|+|++++. .|++++|++|++.|+++ | +||+++||||+|||||||
T Consensus 79 Sn~~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~ye~~i~~~--------------~~~~Dl~lLG~G~dGH~as~ 142 (226)
T 3lwd_A 79 SNARLVRETLLVGP--AAEACFHPLTTDDDTPEAGVETVAERLESL--------------PWPASAVILGMGGDGHTASL 142 (226)
T ss_dssp CHHHHHHHHTSSGG--GGGSEEECSCCSSSSHHHHHHHHHHHHHTS--------------CSSBSEEEECCCTTSCBTTB
T ss_pred HHHHHHHHHhcCCC--CcHHhEecCCCCcCCHHHHHHHHHHHHHhc--------------CCCCCEEEECcCCCCCeeec
Confidence 99999999999984 678899998776 59999999999999863 4 899999999999999999
Q ss_pred CCCCCcccc---ccceEEeecCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCccccccccccCC
Q 024468 169 FPNHSVLDV---KNQWVSFITDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTN 245 (267)
Q Consensus 169 fP~~~~~~~---~~~~v~~~~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~~Pas~l~~~~ 245 (267)
|||++.+++ ++.++..+ +.+++|++|||||+++|++||+|+|+++|++|++++++++++++ +.++|+|+|+...
T Consensus 143 fPg~~~L~~~~~~~~~~~~~-~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~--~~~~Pas~l~~h~ 219 (226)
T 3lwd_A 143 FPDSEQLATALETTSAAVVV-HAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEALAGDD--VRQLPIRAFLSQP 219 (226)
T ss_dssp CTTCTTHHHHHHCCSSEEEE-CCTTSSSCEEEECHHHHTCBSCEEEEEESHHHHHHHHHHHHCCC--TTTSTTHHHHTSC
T ss_pred CCCChhhhhhhccCCeEEec-CCCCCCCcEEEcCHHHHHhhCeEEEEEECHHHHHHHHHHHcCCC--CCcCChHHHhcCC
Confidence 999987753 33455444 57889999999999999999999999999999999999999976 7899999999433
Q ss_pred CeEEEE
Q 024468 246 GKLVWF 251 (267)
Q Consensus 246 ~~~~~~ 251 (267)
.+++|.
T Consensus 220 ~~v~w~ 225 (226)
T 3lwd_A 220 IATYWA 225 (226)
T ss_dssp CEEEEE
T ss_pred CeEEeC
Confidence 577774
No 8
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=100.00 E-value=4.3e-60 Score=412.27 Aligned_cols=219 Identities=27% Similarity=0.428 Sum_probs=195.0
Q ss_pred CcEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCCh
Q 024468 10 RGELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHS 89 (267)
Q Consensus 10 ~~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~ 89 (267)
.|++++|+|.+++++++|++|++.++++++++++++|+||||+||..+|+.|.. .++||+||++|++||||||++|+
T Consensus 5 ~m~~~i~~~~~~l~~~~A~~i~~~i~~~i~~~~~~~l~lsgGstp~~~y~~L~~---~~idw~~v~~f~~DEr~vp~~~~ 81 (233)
T 3nwp_A 5 ETVFKSFDTPSALEQQLASKIASQLQEAVDARGKASLVVSGGSTPLKLFQLLSM---KSIDWSDVYITLADERWVEADAD 81 (233)
T ss_dssp CCCEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHHH---CCSCGGGEEEEESEEESSCTTST
T ss_pred eeEEEEECCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHHh---cCCChhHeEEEeCeecccCCCCh
Confidence 589999999999999999999999999999999999999999999999987765 47999999999999999999999
Q ss_pred hhHHHHHHHHhcccCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhhhccccccCCCCCC-cceEEEeccCCCCceec
Q 024468 90 DSNYKLAKEGLLSKQVPIVPSHVHSINDS-LSAEEAADEYEFDIRQLVKTRMVCVSDISDCP-KFDLILLGMGSDGHVAS 167 (267)
Q Consensus 90 ~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~-~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~-~~Dl~lLG~G~DGHiAs 167 (267)
+||+++|+++||+++ ++ +++++++++. .|++++|++|++.|++ .| +||+++||||+||||||
T Consensus 82 ~Sn~~~~~~~ll~~~-~~-~~~~~~~~~~~~~~~~~~~~ye~~i~~--------------~~~~~Dl~lLG~G~dGHias 145 (233)
T 3nwp_A 82 ASNERLVREHLLQNR-AS-NAKFRGLKNMFSTAEAGADMAAESLSN--------------FPRPFDVVVLGMGNDGHTCS 145 (233)
T ss_dssp TCHHHHHHHHTSSGG-GG-GSEECCSCCSSSSHHHHHHHHHHHTTT--------------SCSSBSEEEECCCTTSCBTT
T ss_pred HHHHHHHHHHhhccC-Cc-cceEEcCCCCCCCHHHHHHHHHHHHHh--------------cCCCCCEEEEccCCCCCeee
Confidence 999999999999998 64 5678886654 5999999999999975 35 89999999999999999
Q ss_pred cCCCCCccccc---cceEEeecCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCccccccccccC
Q 024468 168 LFPNHSVLDVK---NQWVSFITDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPSLPARMAQPT 244 (267)
Q Consensus 168 lfP~~~~~~~~---~~~v~~~~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~~Pas~l~~~ 244 (267)
||||++.+.+. ..++..+ +.+++|++|||||+++|++||+|+|+++|++|++++++++++++ +.++|+|+|+ .
T Consensus 146 ~fPg~~~L~~~~~~~~~~~~~-~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~--~~~~Pas~l~-~ 221 (233)
T 3nwp_A 146 WFPCSAELENALTTQALCVAT-NPTTAPHGRITLSKSAILNSRQIYLHLVGEQKLSVYRQALESDD--VHAMPIRAVL-A 221 (233)
T ss_dssp BCTTCTTHHHHHHCCSSEEEE-CCSSSSSCEEEECHHHHHSBSCEEEEEESHHHHHHHHHHHTCCC--TTTCTTHHHH-S
T ss_pred cCCCCchhhhhcccCceEEEC-CCCCCCCceEECCHHHHHhhCeEEEEEECHHHHHHHHHHHhCCC--CCCccHHHHH-h
Confidence 99999865431 2255544 45789999999999999999999999999999999999999876 7899999999 5
Q ss_pred CC----eEEEE
Q 024468 245 NG----KLVWF 251 (267)
Q Consensus 245 ~~----~~~~~ 251 (267)
|+ +++|.
T Consensus 222 h~~~~~~v~w~ 232 (233)
T 3nwp_A 222 QRKTPVDVFWS 232 (233)
T ss_dssp CSSSCEEEEEE
T ss_pred CCCCCcEEEeC
Confidence 64 46674
No 9
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=100.00 E-value=7.7e-60 Score=412.27 Aligned_cols=234 Identities=31% Similarity=0.498 Sum_probs=207.0
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcc-cCCCCCCCCceeEEeeceeccCCCCh
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEA-PYNKTVDWAKWYIFWADERVVAKNHS 89 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~-~~~~~i~w~~v~~f~~DEr~vp~~~~ 89 (267)
|++++|+|++++++++|++|.+.++ +++.++|+||||+||..+|+.+.. .+..+++|++|++|++|||+||.+|+
T Consensus 2 m~~~~~~~~~~l~~~aA~~i~~~i~----~~~~~~l~lsgGstp~~~~~~L~~~~~~~~~~w~~v~~f~~DEr~vp~~~~ 77 (238)
T 1y89_A 2 INHKIFPTADAVVKSLADDMLAYSQ----QGQPVHISLSGGSTPKMLFKLLASQPYANDIQWKNLHFWWGDERCVAPDDA 77 (238)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHT----TSSCEEEEECCSHHHHHHHHHHTSTTHHHHSCGGGEEEEESEEESSCTTST
T ss_pred ceEEEeCCHHHHHHHHHHHHHHHHH----hCCCEEEEECCCccHHHHHHHHHhhhhccCCChhHeEEEeceecCCCCCCH
Confidence 7999999999999999999987544 488999999999999999987754 22234999999999999999999999
Q ss_pred hhHHHHHHHHhcccCCCCCCCCeEeCCCCCCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceeccC
Q 024468 90 DSNYKLAKEGLLSKQVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLF 169 (267)
Q Consensus 90 ~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAslf 169 (267)
+||+++++++||+++ +++++|+|++++..+++++|++|++.|++.++.. +..++||+++||||+||||||||
T Consensus 78 ~Sn~~~~~~~l~~~~-~~~~~~i~~~~~~~~~~~~~~~y~~~l~~~~~~~-------~~~~~~Dl~lLGiG~dGH~aslf 149 (238)
T 1y89_A 78 ESNYGEANALLFSKI-NMPAQNIHRILGENEPQAEAERFAQAMAHVIPTE-------NGTPVFDWILLGVGADGHTASLF 149 (238)
T ss_dssp TCHHHHHHHHTGGGS-CCCGGGBCCCCTTSCHHHHHHHHHHHHHHHSCEE-------TTEECCSEEEECCCTTSCBTTBC
T ss_pred HHHHHHHHHHhhccC-CCCHHHEEeCCCCCCHHHHHHHHHHHHHHhhccc-------CCCCCCCEEEECCCCCCceeecC
Confidence 999999999999999 9999999999987799999999999999864311 01247999999999999999999
Q ss_pred CCCCccccccceEEeecCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCC-CCCCccccccccccCCCeE
Q 024468 170 PNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDL-GPNCPSLPARMAQPTNGKL 248 (267)
Q Consensus 170 P~~~~~~~~~~~v~~~~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~-~~~~~~~Pas~l~~~~~~~ 248 (267)
|++ +.++++++..+.+.+++|.+|||||++.|++||+|+++++|++|+++++++++++ + +.++|+|+|+..|+++
T Consensus 150 P~~--l~~~~~~v~~~~~~~~~p~~rITltl~~i~~a~~vi~~a~G~~Ka~ai~~~l~~~~~--~~~~Pas~l~~~~~~~ 225 (238)
T 1y89_A 150 PGQ--TDYADANLSVVASHPESGQLRVSKTAKVLQAAKRISYLVLGAGKAEIVEQIHTTPAE--QLPYPAAKIHSTSGVT 225 (238)
T ss_dssp TTT--CCTTCCSSEEEEECTTTCCEEEEECHHHHHHSSEEEEEECSGGGHHHHHHHHHSCGG--GCCCHHHHCCCSSSEE
T ss_pred CCC--CCCCCcEEEeccCCCCCCCCeEECCHHHHHhCCEEEEEEeCHHHHHHHHHHHhCCCC--CccCCHHHHhcCCCCE
Confidence 998 6666677766656677899999999999999999999999999999999999985 4 6789999999448999
Q ss_pred EEEecHHHHhhc
Q 024468 249 VWFLDKPAASKL 260 (267)
Q Consensus 249 ~~~~D~~Aa~~l 260 (267)
+|++|++|+++|
T Consensus 226 ~~~~D~~Aa~~l 237 (238)
T 1y89_A 226 EWYLDSDAAAKI 237 (238)
T ss_dssp EEEEEHHHHTTT
T ss_pred EEEEChHHHhhc
Confidence 999999999876
No 10
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=100.00 E-value=1.4e-59 Score=409.09 Aligned_cols=217 Identities=26% Similarity=0.379 Sum_probs=192.4
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChh
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSD 90 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~ 90 (267)
|++++|+|++++++++|++|++.++++++++++++|+||||+||..+|+.|.. .++||+||++|++||||||++|++
T Consensus 3 m~i~i~~~~~~l~~~~A~~i~~~i~~~i~~~~~~~l~lsgGstp~~~y~~L~~---~~i~w~~v~~f~~DEr~vp~~~~~ 79 (232)
T 3lhi_A 3 FVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALSQ---KDLDWKNVGITLADERIVPTNHAD 79 (232)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHHT---SCCCGGGEEEEESEEESSCTTSTT
T ss_pred eEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHHh---cCCCchheEEEEeeeccCCCCChH
Confidence 89999999999999999999999999999999999999999999999987765 479999999999999999999999
Q ss_pred hHHHHHHHHhcccCCCCCCCCeEeCCC-CCCHH--HHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceec
Q 024468 91 SNYKLAKEGLLSKQVPIVPSHVHSIND-SLSAE--EAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVAS 167 (267)
Q Consensus 91 Sn~~~l~~~ll~~~~~i~~~~~~~~~~-~~d~~--~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAs 167 (267)
||+++|+++||+++ ++ +++++++.+ ..|++ ++|++|++.|++ .|+||+++||||+||||||
T Consensus 80 Sn~~~~~~~ll~~~-~~-~~~~~p~~~~~~~~~~~~~~~~ye~~i~~--------------~~~~Dl~lLG~G~dGH~as 143 (232)
T 3lhi_A 80 SNTGLVREYLLKNK-AA-AAVWIPMVEDGKTETELHPDAVVDYALKH--------------YKQPDVLILGMGNDGHTAS 143 (232)
T ss_dssp CHHHHHHHHTSSGG-GG-GSEECCSSCTTCCGGGCCHHHHHHHHHHH--------------CCCCSEEEECCCTTSCBTT
T ss_pred HHHHHHHHHhccCC-Cc-cceEecCCCCCCChhhHHHHHHHHHHHhh--------------CCCCCEEEEccCCCCCeee
Confidence 99999999999998 64 456666543 45888 999999999986 4789999999999999999
Q ss_pred cCCCCCcccc-----ccceEEeecCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCccccccccc
Q 024468 168 LFPNHSVLDV-----KNQWVSFITDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPSLPARMAQ 242 (267)
Q Consensus 168 lfP~~~~~~~-----~~~~v~~~~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~~Pas~l~ 242 (267)
||||++.+.+ +..++... +.+++|++|||||+++|++||+|+|+++|++|++++++++++ + +.++|+|+|+
T Consensus 144 ~fPg~~~l~~~~~~~~~~~~~~~-~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g-~--~~~~Pas~l~ 219 (232)
T 3lhi_A 144 IFPKAPQFQTAIDGSAGVALVHT-TPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQG-E--NREYPISLVL 219 (232)
T ss_dssp BCTTCTTHHHHHCCTTCCCEEEE-CCSSSSSCEEEECHHHHHTCSEEEEEEESHHHHHHHHHHHTS-C--CTTSTHHHHH
T ss_pred cCCCChhhhhhhccccCcEEEeC-CCCCCCCceEEecHHHHHhcCeEEEEEECHHHHHHHHHHHhC-C--CccCcHHHHH
Confidence 9999987644 12244433 567889999999999999999999999999999999999998 4 6799999999
Q ss_pred cCCC----eEEEE
Q 024468 243 PTNG----KLVWF 251 (267)
Q Consensus 243 ~~~~----~~~~~ 251 (267)
.|+ +++|.
T Consensus 220 -~h~~~~~~v~w~ 231 (232)
T 3lhi_A 220 -NHQGVNCHVFYA 231 (232)
T ss_dssp -TSTTCCEEEEEE
T ss_pred -hCCCCCcEEEeC
Confidence 676 56663
No 11
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=100.00 E-value=1.5e-59 Score=422.50 Aligned_cols=236 Identities=25% Similarity=0.254 Sum_probs=205.8
Q ss_pred CCCCcEEEEeCCHHHHHHHHHHHHHHHHHH--HHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceecc
Q 024468 7 HRDRGELRIHESVEELSTNLADYIADLSEA--SVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVV 84 (267)
Q Consensus 7 ~~~~~~~~i~~~~~~l~~~~a~~i~~~i~~--~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~v 84 (267)
...+|++++++|++++++++|+.|++.|++ +++++++++|+||||+||..+|+.|...++.++||++|++||+|||+|
T Consensus 23 ~~~~Mkiii~~d~~~ls~~aA~~i~~~I~~~~~~~~~~~~~l~LsgGsTP~~ly~~L~~~~~~~idw~~V~~f~~DEr~v 102 (312)
T 3e15_A 23 HLHNVKYLEAKDLTDFNQKSAYYICHQIAEKQLSKEGGHVVIGLSGGKTPIDVYKNIALVKDIKIDTSKLIFFIIDERYK 102 (312)
T ss_dssp EETTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEECCSHHHHHHHHHHTTCCSSCCCGGGCEEEESEEECC
T ss_pred CcCCeeEEEeCCHHHHHHHHHHHHHHHHHhhhhhhhCCCEEEEEeCCCCHHHHHHHHHHhhccCCCccceEEEEeeeecC
Confidence 346899999999999999999999999876 588899999999999999999987765556789999999999999999
Q ss_pred CCCChhhHHHHHHHHhcccCCCCCC-CCeEeCCCCCCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCC
Q 024468 85 AKNHSDSNYKLAKEGLLSKQVPIVP-SHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDG 163 (267)
Q Consensus 85 p~~~~~Sn~~~l~~~ll~~~~~i~~-~~~~~~~~~~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DG 163 (267)
|.+|++||+++++ +||+++ ++++ +|+|.+++..|++++|++|++.|++.+.. .|+||+++||||+||
T Consensus 103 p~d~~~Sn~~~~~-~l~~~v-~i~~~~~i~~~~g~~d~~~~a~~Ye~~I~~~~~~----------~g~~DL~LLGiG~DG 170 (312)
T 3e15_A 103 RDDHKFSNYNNIK-FLFESL-KINEKEQLYRPDTSKNIVECVRDYNEKIKNMVKK----------YTKVDIAILGMGSDF 170 (312)
T ss_dssp TTCCTTCHHHHHH-HHHHHT-TCCHHHHEECCCTTSCHHHHHHHHHHHHHHHHHH----------HCSCCEEEECCCTTS
T ss_pred CCCChHHHHHHHH-HHHhcC-CCCccccEEcCCCCcCHHHHHHHHHHHHHHHHhh----------cCCCcEEEEccCCCC
Confidence 9999999999996 899999 9987 79999999889999999999999865432 378999999999999
Q ss_pred ceeccCCCCCc------------cccccc-------------------eEEeecCCCCCCCCeEEeCHHHHHhccceeEE
Q 024468 164 HVASLFPNHSV------------LDVKNQ-------------------WVSFITDSPKPPPERITFTLPVINSASIVVVV 212 (267)
Q Consensus 164 HiAslfP~~~~------------~~~~~~-------------------~v~~~~~~~~~p~~riTl~~~~i~~A~~iill 212 (267)
||||||||+++ +.++++ +.....+.+++|++|||||+++|++||+|+|+
T Consensus 171 HiaslfPg~~~~~~~~~~~~t~~l~e~t~~~~~~~~s~~~~~~~~~~~~~~f~~~~~~pP~~rITlt~~~I~~Ak~v~~l 250 (312)
T 3e15_A 171 HIASLFPNIFFNIYMNNYQNSYIYDESSIKVANSNDTSDNDNLDLLKEYVYFTTTNNFDVRKRITVSLDLLGNASSKIFL 250 (312)
T ss_dssp CBTTBCSSHHHHHHHHHTGGGSSSCGGGCCCCC---CCHHHHHTTCCCSEEEEECCSTTCSEEEEECHHHHHTCSEEEEE
T ss_pred ceeecCCCCcccccccccccceeecHHHHHHhhcccccccccccccccceeeccCCCCCCCeEEEecHHHHhcCCeEEEE
Confidence 99999999863 222221 22334456788899999999999999999999
Q ss_pred EeCccHHHHHHHHHh-CCCCCCc---cccccccccCCCeEEEEecHHHH
Q 024468 213 VTGESKAEAVHLAID-DLGPNCP---SLPARMAQPTNGKLVWFLDKPAA 257 (267)
Q Consensus 213 ~~G~~K~~~l~~~l~-~~~~~~~---~~Pas~l~~~~~~~~~~~D~~Aa 257 (267)
++|++|+++|+++|+ +++ +. .+|||+|+ .|+++++++|+.+.
T Consensus 251 v~G~~Ka~av~~~l~~g~v--t~~~~~~PAS~Lq-~Hp~~~vv~~~~~~ 296 (312)
T 3e15_A 251 LNSTDKLDLWKNMLLKSYV--DVNYCLYPAVYLI-DSMNTTVVTCGYTN 296 (312)
T ss_dssp ECSHHHHHHHHHHHHHTTT--TCCTTTCHHHHHH-HTSCEEEEEESCTT
T ss_pred EcChHHHHHHHHHHHhCCC--CCCcCccchHHHh-hCCCEEEEEcCCcc
Confidence 999999999999999 876 45 89999999 79999988877653
No 12
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=100.00 E-value=2.3e-59 Score=407.43 Aligned_cols=218 Identities=28% Similarity=0.446 Sum_probs=200.2
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChh
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSD 90 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~ 90 (267)
-++++|+|++++++++|++|.+.+++++++++.++|+||||+||..+|+.|.. ..+||++|++||+|||+||.+|++
T Consensus 14 ~~~~~~~~~~~l~~~aA~~i~~~i~~~~~~~~~~~l~LsgGsTp~~ly~~L~~---~~i~w~~v~~f~~DEr~vp~~~~~ 90 (232)
T 1vl1_A 14 EKTVIYLLEDGYVDFVVEKIRTKMEKLLEEKDKIFVVLAGGRTPLPVYEKLAE---QKFPWNRIHFFLSDERYVPLDSDQ 90 (232)
T ss_dssp -CEEEEEESSCHHHHHHHHHHHHHHHHHHHCSCEEEEECCSTTHHHHHHHHTT---SCCCGGGEEEEESEEESSCTTSTT
T ss_pred eeEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCCccHHHHHHHHHH---cCCChhHEEEEeCeEeecCCCChH
Confidence 37889999999999999999999999999999999999999999999987765 369999999999999999999999
Q ss_pred hHHHHHHHHhcccCCCCCCCCeEeCCCCCCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceeccCC
Q 024468 91 SNYKLAKEGLLSKQVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFP 170 (267)
Q Consensus 91 Sn~~~l~~~ll~~~~~i~~~~~~~~~~~~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAslfP 170 (267)
||+++|+++||+++ +++++|+|++++..+++++|++|++.|++. .|+||+++||||+|||||||||
T Consensus 91 Sn~~~~~~~l~~~v-~i~~~~i~~~~~~~~~e~~~~~y~~~i~~~-------------~~~~Dl~lLGiG~dGH~aslfP 156 (232)
T 1vl1_A 91 SNFRNINEVLFSRA-KIPSGNVHYVDTSLPIEKACEKYEREIRSA-------------TDQFDLAILGMGPDGHVASIFD 156 (232)
T ss_dssp CHHHHHHHHTTTTS-CCCGGGEECCCTTSCHHHHHHHHHHHHHHH-------------CSSCSEEEECCCTTSCBTTBCS
T ss_pred HHHHHHHHHHhccC-CCCHHHEecCCCCCCHHHHHHHHHHHHHhc-------------CCCCCEEEEecCCCCchhhccC
Confidence 99999999999999 999999999998889999999999999861 3689999999999999999999
Q ss_pred -CCCccccccceEEeecCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCccccccccccCCCeEE
Q 024468 171 -NHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLV 249 (267)
Q Consensus 171 -~~~~~~~~~~~v~~~~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~~Pas~l~~~~~~~~ 249 (267)
+++.+.+++++|. +.+++|++|||||+++|++||+|+|+++|++|+++++++++++ .+|+|+|+ .|++++
T Consensus 157 ~g~~~l~~~~~~v~---~~~~~p~~rITltl~~I~~A~~iilla~G~~Ka~av~~~l~g~-----~~Pas~l~-~h~~~~ 227 (232)
T 1vl1_A 157 LETGNKDNLVTFTD---PSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDT-----PLPAYFVR-GKEKTV 227 (232)
T ss_dssp HHHHTCSSSEEECS---SBTTTTBCEEEECHHHHTTCSEEEEEEESHHHHHHHHHHHTTC-----CCGGGGCC-CSSEEE
T ss_pred CCCcccccCCcEEe---cCCCCCCCEEECCHHHHHhCCEEEEEEcCHHHHHHHHHHHhCC-----CCChHHhC-cCCCEE
Confidence 9876555555443 5678999999999999999999999999999999999999972 39999999 599999
Q ss_pred EEecH
Q 024468 250 WFLDK 254 (267)
Q Consensus 250 ~~~D~ 254 (267)
|++|+
T Consensus 228 ~~~D~ 232 (232)
T 1vl1_A 228 WFVGK 232 (232)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 99995
No 13
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=100.00 E-value=8.8e-53 Score=377.38 Aligned_cols=232 Identities=22% Similarity=0.240 Sum_probs=204.0
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHh-cCcEEEEEcCCChHHHHHHHhc-ccCCCCCCCCceeEEeeceec-cCCC
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASVKE-RGVFAIALSGGSLIGLMGKLCE-APYNKTVDWAKWYIFWADERV-VAKN 87 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~-~~~~~l~lsGGstp~~l~~ll~-~~~~~~i~w~~v~~f~~DEr~-vp~~ 87 (267)
|++++|+|.+++++++|++|.+.+++++.+ ++.++|+|+||+||..+|+.|. .++...++|++|++|++|||+ ||.+
T Consensus 1 m~i~i~~~~~~la~~aA~~i~~~i~~~~~~~~~~~~lglsgGsTp~~~~~~L~~~~~~~~i~~~~v~v~~lDEr~gv~~~ 80 (289)
T 1ne7_A 1 MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDLSFKYVKTFNMDEYVGLPRD 80 (289)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSHHHHHHHHHHHHHHHTTSCCCTTEEEEESEEETTSCTT
T ss_pred CeEEEECCHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEcCCccHHHHHHHHHhhhhccCCCchheEEEeCceeecCCCC
Confidence 789999999999999999999988876543 4559999999999999997664 344567999999999999999 9999
Q ss_pred ChhhHHHHHHHHhcccCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCcee
Q 024468 88 HSDSNYKLAKEGLLSKQVPIVPSHVHSINDS-LSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVA 166 (267)
Q Consensus 88 ~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~-~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiA 166 (267)
|++||+++++++|++++ +++++|+|.+++. .+++++|.+|++.|++. ++||+++||||+|||||
T Consensus 81 ~~~Sn~~~~~~~l~~~~-~~~~~~i~~p~~~~~~~e~~~~~ye~~i~~~--------------~~~Dl~lLGiG~dGH~a 145 (289)
T 1ne7_A 81 HPESYHSFMWNNFFKHI-DIHPENTHILDGNAVDLQAECDAFEEKIKAA--------------GGIELFVGGIGPDGHIA 145 (289)
T ss_dssp STTSHHHHHHHHTGGGS-CCCGGGEECCCTTCSSHHHHHHHHHHHHHHT--------------TSCSEEEECCCTTCCST
T ss_pred cHHHHHHHHHHHhhccC-CCCHHHEecCCCCCCCHHHHHHHHHHHHHhc--------------CCCCEEEEccCCCCcce
Confidence 99999999999999999 9999999999875 48999999999999873 57999999999999999
Q ss_pred ccCCCCCccccccceEEe-----------e-cCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCc
Q 024468 167 SLFPNHSVLDVKNQWVSF-----------I-TDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCP 234 (267)
Q Consensus 167 slfP~~~~~~~~~~~v~~-----------~-~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~ 234 (267)
||||+++. .+.++++.. + .+.+.+|..|||||++.|++|++++++++|++|++++++++.++. +.
T Consensus 146 slfPg~~l-~~~~~~~~L~~~~~~~~~~~f~~~~~~vp~~~iTl~l~~l~~a~~vi~la~G~~Ka~ai~~al~g~~--~~ 222 (289)
T 1ne7_A 146 FNEPGSSL-VSRTRVKTLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGV--NH 222 (289)
T ss_dssp TCCTTCCT-TCCSEEEECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCC--CT
T ss_pred ecCCCCCC-ccccceEEcchhhhhhhhccccCCCCCCCCEEEECCHHHHhcCCEEEEEEcCHHHHHHHHHHHhCCC--Cc
Confidence 99999875 333333321 1 234677899999999999999999999999999999999999976 57
Q ss_pred cccccccccCCCeEEEEecHHHHhhcc
Q 024468 235 SLPARMAQPTNGKLVWFLDKPAASKLQ 261 (267)
Q Consensus 235 ~~Pas~l~~~~~~~~~~~D~~Aa~~l~ 261 (267)
++|+|+|+ .|++++|++|++||+.|+
T Consensus 223 ~~Pas~l~-~h~~~~li~D~~aA~~L~ 248 (289)
T 1ne7_A 223 MWTVSAFQ-QHPRTVFVCDEDATLELK 248 (289)
T ss_dssp TSGGGGGG-GCSSEEEEEEGGGGTTSB
T ss_pred cCchHHHc-cCCCEEEEEcHHHHhhcc
Confidence 89999999 699999999999999885
No 14
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=100.00 E-value=1.5e-51 Score=360.00 Aligned_cols=229 Identities=21% Similarity=0.232 Sum_probs=198.7
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhc-ccCCCCCCCCceeEEeeceec-cCCCC
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCE-APYNKTVDWAKWYIFWADERV-VAKNH 88 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~-~~~~~~i~w~~v~~f~~DEr~-vp~~~ 88 (267)
|++++|+|.+++++++|++|.+.+ ++++.++|+|+||+||..+|+.+. .++...++|++|+||++|||+ ||.+|
T Consensus 1 m~~~~~~~~~~l~~~aA~~l~~~i----~~~~~~~i~lsgG~T~~~~~~~L~~~~~~~~~~~~~v~v~~lder~gv~~~~ 76 (242)
T 2bkx_A 1 MKVMECQTYEELSQIAARITADTI----KEKPDAVLGLATGGTPEGTYRQLIRLHQTENLSFQNITTVNLDEYAGLSSDD 76 (242)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHH----HHCTTCEEEECCSSTTHHHHHHHHHHHHHSCCCCTTCEEEESEEETTCCTTS
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHH----HHCCCeEEEECCCCCHHHHHHHHHHHhhccCCChhheEEEeCccccCCCCCc
Confidence 689999999999999999998754 457889999999999999997664 333357999999999999999 99999
Q ss_pred hhhHHHHHHHHhcccCCCCCCCCeEeCCC-CCCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceec
Q 024468 89 SDSNYKLAKEGLLSKQVPIVPSHVHSIND-SLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVAS 167 (267)
Q Consensus 89 ~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~-~~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAs 167 (267)
++||+++++++|++++ +++..++|.+++ ..++++++.+|++.|+.. ++||+++||||+|||+||
T Consensus 77 ~~sn~~~~~~~l~~~~-~~~~~~i~~p~~~~~~~~~~~~~y~~~i~~~--------------~~~Dl~llGiG~dgh~a~ 141 (242)
T 2bkx_A 77 PNSYHFYMNDRFFQHI-DSKPSRHFIPNGNADDLEAECRRYEQLVDSL--------------GDTDIQLLGIGRNGHIGF 141 (242)
T ss_dssp TTSHHHHHHHHTGGGS-CCCGGGEECCCTTCSCHHHHHHHHHHHHHHT--------------TSCSEEEECCCTTSCBTT
T ss_pred hHHHHHHHHHHHhccC-CCCHHHEEcCCCCCCCHHHHHHHHHHHHHhc--------------CCCCEEEECcCCCCccee
Confidence 9999999999999999 999999999986 468999999999999863 589999999999999999
Q ss_pred cCCCCCcccccc--------ceEE--eecCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCcccc
Q 024468 168 LFPNHSVLDVKN--------QWVS--FITDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPSLP 237 (267)
Q Consensus 168 lfP~~~~~~~~~--------~~v~--~~~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~~P 237 (267)
|||+++..+++. ..+. .+.+.+++|.+|||||++.|++|++++++++|++|++++++++.++. +.++|
T Consensus 142 l~p~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~p~~~itltl~~l~~a~~vi~va~G~~Ka~ai~~al~g~~--~~~~P 219 (242)
T 2bkx_A 142 NEPGTSFKSRTHVVTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNI--SEDFP 219 (242)
T ss_dssp BCTTCCTTCCSEEEECCHHHHHHHGGGSSSGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHTCC--CTTSG
T ss_pred CCCCCccccCceEEeCCHHHHHHHhhhcCCCCCCCCccEEcCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCC--CCccc
Confidence 999986543321 1000 12223567889999999999999999999999999999999999986 67899
Q ss_pred ccccccCCCeEEEEecHHHHhhcc
Q 024468 238 ARMAQPTNGKLVWFLDKPAASKLQ 261 (267)
Q Consensus 238 as~l~~~~~~~~~~~D~~Aa~~l~ 261 (267)
+|+|+ .|++++|++|++|+++|+
T Consensus 220 as~l~-~~~~~~~~~D~~Aa~~l~ 242 (242)
T 2bkx_A 220 ASALH-LHSDVTVLIDREAASLRP 242 (242)
T ss_dssp GGGGG-GCSSEEEEEETTTTTTCC
T ss_pred HHHhc-cCCCEEEEEchHHhccCC
Confidence 99999 689999999999998763
No 15
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=100.00 E-value=2.4e-51 Score=363.81 Aligned_cols=232 Identities=22% Similarity=0.263 Sum_probs=204.1
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHH-HhcCcEEEEEcCCChHHHHHHHhc-ccCCCCCCCCceeEEeeceec-cCCC
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASV-KERGVFAIALSGGSLIGLMGKLCE-APYNKTVDWAKWYIFWADERV-VAKN 87 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i-~~~~~~~l~lsGGstp~~l~~ll~-~~~~~~i~w~~v~~f~~DEr~-vp~~ 87 (267)
|++++|+|.+++++++|++|.+.+++++ ++++.++|+|+||+||..+|+.+. .++..+++|++|++|++|||+ ||.+
T Consensus 1 m~~~~~~~~~~l~~~aA~~l~~~l~~~~~~~~~~~~i~lsgGsTp~~~~~~L~~~~~~~~~~~~~v~v~~ldEr~gv~~~ 80 (266)
T 1fs5_A 1 MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKE 80 (266)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHHHHHCCCSSSCEEEEECCSSTTHHHHHHHHHHHHTTSCCCTTEEEEESEEESSCCTT
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHHHHhhhcccCceEEEEcCCCCHHHHHHHHHHHhhcCCCChHHeEEEeCeeccCCCCC
Confidence 7899999999999999999999888777 678899999999999999997664 344567999999999999999 9999
Q ss_pred ChhhHHHHHHHHhcccCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCcee
Q 024468 88 HSDSNYKLAKEGLLSKQVPIVPSHVHSINDS-LSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVA 166 (267)
Q Consensus 88 ~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~-~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiA 166 (267)
|++||+++++++|++++ ++++.++|.+++. .++++++.+|++.|++. ++||+++||||+|||+|
T Consensus 81 ~~~sn~~~~~~~l~~~~-~~~~~~i~~p~~~~~~~e~~~~~y~~~l~~~--------------~~~Dl~llGiG~dGh~a 145 (266)
T 1fs5_A 81 HPESYYSFMHRNFFDHV-DIPAENINLLNGNAPDIDAECRQYEEKIRSY--------------GKIHLFMGGVGNDGHIA 145 (266)
T ss_dssp STTSHHHHHHHHTGGGS-CCCGGGEECCCTTCSSHHHHHHHHHHHHHHH--------------CCCSEEEECCCTTCCST
T ss_pred CHHHHHHHHHHHhhccC-CCCHHHEEeCCCCCCCHHHHHHHHHHHHHhc--------------CCCCEEEEccCCCCCee
Confidence 99999999999999999 9999999999876 48999999999999874 47999999999999999
Q ss_pred ccCCCCCccccccceEEe-----------e-cCCCCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCc
Q 024468 167 SLFPNHSVLDVKNQWVSF-----------I-TDSPKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCP 234 (267)
Q Consensus 167 slfP~~~~~~~~~~~v~~-----------~-~~~~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~ 234 (267)
||||+++.. +.+.++.. + .+.+.+|..+||||++.|++|++++++++|++|++++++++.++. +.
T Consensus 146 sl~pg~~~~-~~~~~~~l~~~~~~~~~~~f~~~~~~~p~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~--~~ 222 (266)
T 1fs5_A 146 FNEPASSLA-SRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCV--NH 222 (266)
T ss_dssp TCCSSCCTT-CCSEEEECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHSCC--CS
T ss_pred ecCCCCCCC-ccccEEEechhhhhhhhccccCCcCCCCcEEEECChHHHhcCCEEEEEecChHHHHHHHHHhcCCC--CC
Confidence 999998753 32333321 1 133456777888888999999999999999999999999999976 67
Q ss_pred cccccccccCCCeEEEEecHHHHhhcc
Q 024468 235 SLPARMAQPTNGKLVWFLDKPAASKLQ 261 (267)
Q Consensus 235 ~~Pas~l~~~~~~~~~~~D~~Aa~~l~ 261 (267)
++|+|+|+ .|++++|++|++||+.|+
T Consensus 223 ~~Pas~l~-~~~~~~li~D~~aA~~L~ 248 (266)
T 1fs5_A 223 MWTISCLQ-LHPKAIMVCDEPSTMELK 248 (266)
T ss_dssp SSGGGGGG-GCSSEEEEECSGGGTTSB
T ss_pred cCChHHHc-cCCCEEEEEeHHHhhhcc
Confidence 89999999 689999999999999885
No 16
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=100.00 E-value=6.7e-49 Score=341.76 Aligned_cols=220 Identities=21% Similarity=0.248 Sum_probs=189.9
Q ss_pred CcEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceec-cCCCC
Q 024468 10 RGELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERV-VAKNH 88 (267)
Q Consensus 10 ~~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~-vp~~~ 88 (267)
+|++++|+|.+++++++|++|.+.+ ++++. +|+|+||+||..+|+.+.. .+++|++|+||++|||+ ||.+|
T Consensus 1 ~m~~~~~~~~~~l~~~aA~~l~~~i----~~~~~-~i~ls~G~T~~~~~~~L~~---~~~~~~~v~v~~ldEr~gv~~~~ 72 (234)
T 2ri0_A 1 SMKTIKVKNKTEGSKVAFRMLEEEI----TFGAK-TLGLATGSTPLELYKEIRE---SHLDFSDMVSINLDEYVGLSADD 72 (234)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHH----HTTCC-EEEECCSSTTHHHHHHHHT---SCCCCTTCEEEESEEETTCCTTS
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHH----HhCCC-EEEEcCCCCHHHHHHHHHh---cCCChhheEEEeCeeecCCCCCC
Confidence 4899999999999999999998654 44667 9999999999999987764 36899999999999998 99999
Q ss_pred hhhHHHHHHHHhcccCCCCCCCCeEeCCCC-CCHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceec
Q 024468 89 SDSNYKLAKEGLLSKQVPIVPSHVHSINDS-LSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVAS 167 (267)
Q Consensus 89 ~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~-~d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAs 167 (267)
++||+++++++|++++ ++++. |.+++. .++++++.+|++.|++ ++||+++||||+|||+||
T Consensus 73 ~~sn~~~~~~~l~~~~-~~~~~--~~~~~~~~~~~~~~~~y~~~i~~---------------~~~Dl~llGiG~dgh~a~ 134 (234)
T 2ri0_A 73 KQSYAYFMKQNLFAAK-PFKKS--YLPNGLAADLAKETEYYDQILAQ---------------YPIDLQILGIGRNAHIGF 134 (234)
T ss_dssp TTSHHHHHHHHTTTTS-CCSEE--ECCCTTCSCHHHHHHHHHHHHHH---------------SCCSEEEECCCTTSCBTT
T ss_pred hHHHHHHHHHHHhccC-CCcHh--hcCCCCCCCHHHHHHHHHHHHHh---------------CCCCEEEEccCCCCCchh
Confidence 9999999999999999 87766 444443 4899999999999986 269999999999999999
Q ss_pred cCCCCCccccccceEEeec-----------CC-CCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCcc
Q 024468 168 LFPNHSVLDVKNQWVSFIT-----------DS-PKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPS 235 (267)
Q Consensus 168 lfP~~~~~~~~~~~v~~~~-----------~~-~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~ 235 (267)
|||+.+.. +.++++ .+. +. +.+|.+|||||++.|++|++++++++|++|++++++++.+++ +.+
T Consensus 135 l~p~~~~~-~~~~~~-~l~~~~~~~~~~~fd~~~~~~~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~--~~~ 210 (234)
T 2ri0_A 135 NEPGTAFS-SQTHLV-DLTPSTIAANSRFFEKAEDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPV--TEE 210 (234)
T ss_dssp BCTTCCTT-CCSEEE-ECCHHHHHHHHTTCSCGGGSCCEEEECCHHHHHTSSEEEEEECSGGGHHHHHHHHHSCC--CTT
T ss_pred cCCCCCCC-CCceEE-ECCHHHHHHhhhhcCCccCCCCceEEeCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCC--CCc
Confidence 99998743 333333 331 22 346889999999999999999999999999999999999987 679
Q ss_pred ccccccccCCCeEEEEecHHHHhhc
Q 024468 236 LPARMAQPTNGKLVWFLDKPAASKL 260 (267)
Q Consensus 236 ~Pas~l~~~~~~~~~~~D~~Aa~~l 260 (267)
+|+|+|+ .|++++|++|++|+++|
T Consensus 211 ~Pas~l~-~~~~~~~~~D~~Aa~~l 234 (234)
T 2ri0_A 211 IPASILQ-THPKVILIVDEKAGAGI 234 (234)
T ss_dssp SGGGGGG-GCSSEEEEEETTTTTTC
T ss_pred cchHHHh-hCCCEEEEEchHHhccC
Confidence 9999999 58999999999999864
No 17
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=99.89 E-value=1.1e-23 Score=185.28 Aligned_cols=203 Identities=15% Similarity=0.155 Sum_probs=154.7
Q ss_pred EEEEeCC--------HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 12 ELRIHES--------VEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 12 ~~~i~~~--------~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
+++|.++ .+++++++|++|.+.+ + +..+|+|++|+||..+|+.+.. .++|++++|+++|+=
T Consensus 24 ~viVv~~~~~~~~~~~~~l~~~aA~~l~~~l----~--~~~viGla~G~T~~~~~~~l~~----~~~~~~v~~v~L~gg- 92 (255)
T 2okg_A 24 DAIIVSGDSDQSPWVKKEMGRAAVACMKKRF----S--GKNIVAVTGGTTIEAVAEMMTP----DSKNRELLFVPARGG- 92 (255)
T ss_dssp EEEEESSCTTTCTHHHHHHHHHHHHHHHHHC----C--SEEEEEECCSHHHHHHHHHCCC----CTTCCEEEEEESEEE-
T ss_pred eEEEECCCCCchhHHHHHHHHHHHHHHHHhC----C--CCCEEEECCcHHHHHHHHhhcc----ccCCCCCEEEECCCC-
Confidence 5566664 5678888888776543 3 4679999999999999987743 258999999999974
Q ss_pred cCCCChhhHHHHHHHHhcccCCCCCCCCeEeCCCCC----CHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEecc
Q 024468 84 VAKNHSDSNYKLAKEGLLSKQVPIVPSHVHSINDSL----SAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGM 159 (267)
Q Consensus 84 vp~~~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~~----d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~ 159 (267)
++. |++|+.++|.++|++++ +++..++|.|++.. +...++..|++.|+.. ++.|++++||
T Consensus 93 l~~-~~~~~~~~~~~~la~~~-~~~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~--------------~~~Di~l~GI 156 (255)
T 2okg_A 93 LGE-DVKNQANTICAHMAEKA-SGTYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTI--------------KSASMLVHGI 156 (255)
T ss_dssp CC----CCHHHHHHHHHHHHH-TCEECCCCCCCSCCHHHHHHHHTSHHHHHHHHHH--------------HTCSEEEECC
T ss_pred CCC-CcccCHHHHHHHHHHHH-CCeeEEEeccccCCHHHHHHHHcChHHHHHHHHH--------------hcCCEEEEec
Confidence 566 89999999999999999 88888998887754 2235678888888763 4799999999
Q ss_pred CCCCceeccCCCCCccccc-------cceEE-----eec-CCCCCC-CCeEEeCHHHHHhccceeEEEeCccHHHHHHHH
Q 024468 160 GSDGHVASLFPNHSVLDVK-------NQWVS-----FIT-DSPKPP-PERITFTLPVINSASIVVVVVTGESKAEAVHLA 225 (267)
Q Consensus 160 G~DGHiAslfP~~~~~~~~-------~~~v~-----~~~-~~~~~p-~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~ 225 (267)
|.+||++ +|+. .+++ ..-+- .+. +...+| .+.|||+++.|++++++++++.|++|+++++.+
T Consensus 157 G~~~~i~--~~g~--~~~~~~~~L~~~~avg~~~~rffd~~G~~V~~~~~igi~l~~i~~~~~vI~vA~G~~Ka~AI~aa 232 (255)
T 2okg_A 157 GEAKTMA--QRRN--TPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAY 232 (255)
T ss_dssp EEHHHHH--HHTT--CCHHHHHHHHHTTEEEEETTEEEETTSCEEEECSEEECCGGGGGGCSEEEEECCSGGGHHHHHHH
T ss_pred CCchhhh--hcCC--CCHHHHHHHHHCCeEEEeehhhhccCCCCccCCceecCCHHHHhCCCCEEEEEcCHHHHHHHHHH
Confidence 9999997 7773 2111 00010 121 223356 789999999999999999999999999999999
Q ss_pred HhCCCCCCccccccccccCCCeEEEEecHHHHhhcc
Q 024468 226 IDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQ 261 (267)
Q Consensus 226 l~~~~~~~~~~Pas~l~~~~~~~~~~~D~~Aa~~l~ 261 (267)
|.++. ..++++|++||..|-
T Consensus 233 l~g~~----------------~~~LItDe~aA~~LL 252 (255)
T 2okg_A 233 FKKPR----------------NTVLVTDEGAAKKLL 252 (255)
T ss_dssp TTSCC----------------CEEEEEEHHHHHHHH
T ss_pred HhCCC----------------CCEEEECHHHHHHHH
Confidence 99864 137789999998763
No 18
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=99.88 E-value=2.2e-22 Score=177.77 Aligned_cols=195 Identities=14% Similarity=0.059 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEEc-CCChHHHHHHHhcccCCCCCCCC-ceeEEeeceeccCCCChhhHHHHHH
Q 024468 20 EELSTNLADYIADLSEASVKERGVFAIALS-GGSLIGLMGKLCEAPYNKTVDWA-KWYIFWADERVVAKNHSDSNYKLAK 97 (267)
Q Consensus 20 ~~l~~~~a~~i~~~i~~~i~~~~~~~l~ls-GGstp~~l~~ll~~~~~~~i~w~-~v~~f~~DEr~vp~~~~~Sn~~~l~ 97 (267)
+++++++|++|.+ .++ +..+|+|+ +|+||..+|+.+... . .|+ +++|+++|| -++ +|++|+.++|.
T Consensus 41 ~~l~~~aA~~l~~----~l~--~~~viGla~~G~T~~~~~~~l~~~---~-~~~~~v~~v~L~g-gl~-~~~~~~~~~~~ 108 (264)
T 2r5f_A 41 QAIGSAAAHYLET----SLS--AQDHIGISSWSSTIRAMVSHMHPQ---P-GKQSAQEVVQLLG-GVG-NKGAFEATLLT 108 (264)
T ss_dssp HHHHHHHHHHHHH----HCC--TTCEEEECTTCHHHHHHHHTCCC------CCCCCSEEEECEE-CCC---CHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hCC--CCCEEEECcchHHHHHHHHhhccc---c-CCCCCcEEEECCC-CCC-CccccCHHHHH
Confidence 3455555555554 443 45689999 999999999876541 2 257 999999999 567 89999999999
Q ss_pred HHhcccCCCCCCCCeEeCCCCC-----CHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCC---CceeccC
Q 024468 98 EGLLSKQVPIVPSHVHSINDSL-----SAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSD---GHVASLF 169 (267)
Q Consensus 98 ~~ll~~~~~i~~~~~~~~~~~~-----d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~D---GHiAslf 169 (267)
++|++++ +++..++|.+.... +...++..|++.|+. .++.|++++|||.+ ||+ ++
T Consensus 109 ~~la~~~-~~~~~~l~~P~~~~~~~~~~~~~~~~~~~~~l~~--------------~~~~Di~l~GIG~~~~~~~i-~~- 171 (264)
T 2r5f_A 109 QRLATLL-NCPAFLLPSQSIEQSVESKQRIVEMEEVKEVLHR--------------FDSITLAIVGIGELEPSQLL-RN- 171 (264)
T ss_dssp HHHHHHH-TSCEECCCCC----------CCHHHHHHHHHHHH--------------TTTCCEEEECCEECC---------
T ss_pred HHHHHHh-CCeeEEeeCCcccCCHHHHHHHHcChHHHHHHHH--------------HhcCCEEEEecCCCCCCccH-hh-
Confidence 9999999 88888887775421 445688999999986 35799999999987 999 87
Q ss_pred CCCCcccc--------ccce--E--Eeec-CCCCCC----CCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCC
Q 024468 170 PNHSVLDV--------KNQW--V--SFIT-DSPKPP----PERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPN 232 (267)
Q Consensus 170 P~~~~~~~--------~~~~--v--~~~~-~~~~~p----~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~ 232 (267)
||+ ..++ .+.- + ..+. +...+| .+.|||+++.|++++++++++.|++|+++++.+|.++..
T Consensus 172 ~g~-~~~~~~~~~L~~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~l~~~~~vI~vA~G~~Ka~AI~aal~g~~~- 249 (264)
T 2r5f_A 172 SGN-YYTEDMLRVLAERGAVGDICLRYFDAQGKPVLEEDEEFVVSMGLGKLRSINRVLGLAGGVRKVQAIKGALLGGYL- 249 (264)
T ss_dssp -------------CTTTTCCEEETTEEECTTSCBC-------CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTCC-
T ss_pred cCC-CCCHHHHHHHHHCCcEEEeEhhhhccCCCCCCCccccceecCCHHHHcCCCCEEEEEcCHHHHHHHHHHHhcCCC-
Confidence 774 2221 1100 0 0121 223456 789999999999999999999999999999999999641
Q ss_pred CccccccccccCCCeEEEEecHHHHhhc
Q 024468 233 CPSLPARMAQPTNGKLVWFLDKPAASKL 260 (267)
Q Consensus 233 ~~~~Pas~l~~~~~~~~~~~D~~Aa~~l 260 (267)
.++++|++||..|
T Consensus 250 ---------------~~LItDe~aA~~L 262 (264)
T 2r5f_A 250 ---------------DVLITDVGTARGL 262 (264)
T ss_dssp ---------------SEEEEEHHHHHHH
T ss_pred ---------------CEEEECHHHHHHH
Confidence 2678999999876
No 19
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=99.85 E-value=2.4e-21 Score=171.22 Aligned_cols=199 Identities=12% Similarity=0.057 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChhhHHHHHHHH
Q 024468 20 EELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKEG 99 (267)
Q Consensus 20 ~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~l~~~ 99 (267)
+++++++|++|.+ .++ +..+|+|++|+||..+|+.+.. .+|++++|+++|+ -++.+|++|+.++|.++
T Consensus 41 ~~l~~~aA~~l~~----~l~--~~~viGla~G~T~~~~~~~l~~-----~~~~~v~~v~L~g-gl~~~~~~~~~~~~~~~ 108 (266)
T 2gnp_A 41 ERISQVAAGVLRN----LID--DNMKIGFSWGKSLSNLVDLIHS-----KSVRNVHFYPLAG-GPSHIHAKYHVNTLIYE 108 (266)
T ss_dssp HHHHHHHHHHHHH----HCC--TTCEEEECCSHHHHHHHHHCCC-----CCCSSCEEEESBC-CCTTSCGGGSHHHHHHH
T ss_pred HHHHHHHHHHHHH----hCC--CCCEEEECChHHHHHHHHhccc-----cCCCCCEEEECCC-CCCCCccccCHHHHHHH
Confidence 4455666666654 443 4568999999999999987754 4899999999997 46888999999999999
Q ss_pred hcccCCCCCCCCeEeCCCCC-----CHHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceeccC-CCCC
Q 024468 100 LLSKQVPIVPSHVHSINDSL-----SAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLF-PNHS 173 (267)
Q Consensus 100 ll~~~~~i~~~~~~~~~~~~-----d~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAslf-P~~~ 173 (267)
|++++ +++..++|.|.... +...++..|++.|+. .++.|++++|||.+||-++++ |+..
T Consensus 109 la~~~-~~~~~~l~~P~~~~~~~~~~~~~~~~~~~~~l~~--------------~~~~Di~l~GIG~~~~~~~~~~~g~~ 173 (266)
T 2gnp_A 109 MSRKF-HGECTFMNATIVQENKLLADGILQSRYFENLKNS--------------WKDLDIAVVGIGDFSNKGKHQWLDML 173 (266)
T ss_dssp HHHHH-TCEECCCCSCSBCSSHHHHHHHHTSTTTHHHHHH--------------TTSCSEEEECCEECSHHHHHTTTTTS
T ss_pred HHHHh-CCeeEEEeCCcccCCHHHHHHHHcCHHHHHHHHH--------------HHhCCEEEEecCCCCCCCcchhcCCC
Confidence 99999 88888888876543 345677788888876 357999999999999855443 3311
Q ss_pred c------cccccce--E--Eeec-CCCCCC----CCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCccccc
Q 024468 174 V------LDVKNQW--V--SFIT-DSPKPP----PERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPSLPA 238 (267)
Q Consensus 174 ~------~~~~~~~--v--~~~~-~~~~~p----~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~~Pa 238 (267)
. +.+.+.- + ..+. +...+| .+.|||++..|++++++++++.|++|+++++.+|.++..
T Consensus 174 s~~~~~~L~~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g~~~------- 246 (266)
T 2gnp_A 174 TEDDFKELTKVKTVGEICCRFFDSKGKEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRANLV------- 246 (266)
T ss_dssp CHHHHHHHHHTTCCEEETTEEECTTSCCCCHHHHTTBCBCCHHHHTTSSEEEEECCSGGGHHHHHHHHHTTCC-------
T ss_pred CHHHHHHHHHCCeEEEEEchhhccCCCCCCCccccceecCCHHHHcCCCCEEEEecChhhHHHHHHHHhcCCC-------
Confidence 0 1111100 0 0122 223567 899999999999999999999999999999999999641
Q ss_pred cccccCCCeEEEEecHHHHhhcc
Q 024468 239 RMAQPTNGKLVWFLDKPAASKLQ 261 (267)
Q Consensus 239 s~l~~~~~~~~~~~D~~Aa~~l~ 261 (267)
.++++|++||..|.
T Consensus 247 ---------~~LItDe~aA~~Ll 260 (266)
T 2gnp_A 247 ---------NHLITDKNTILKVL 260 (266)
T ss_dssp ---------SEEEEEHHHHHHHH
T ss_pred ---------CEEEECHHHHHHHH
Confidence 26789999998763
No 20
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=99.81 E-value=1.2e-20 Score=172.52 Aligned_cols=200 Identities=13% Similarity=0.103 Sum_probs=150.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChhhHHHHHHH
Q 024468 19 VEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKE 98 (267)
Q Consensus 19 ~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~l~~ 98 (267)
.+++++++|+++.+ .+..+ ..+|+|++|+||..+|+.+... .++|+++++|.+|+ -++. |++||..+|.+
T Consensus 124 k~~ia~~AA~~l~~----~i~~~-~~~igl~~GsT~~~~~~~L~~~---~~~~~~v~vv~l~g-gl~~-~~~~~~~~i~~ 193 (345)
T 2o0m_A 124 LSDFGDVLTNTLNL----LLPNG-ENTIAVMGGTTMAMVAENMGSL---ETEKRHNLFVPARG-GIGE-AVSVQANSISA 193 (345)
T ss_dssp HHHHHHHHHHHHHH----HCCSE-EEEEEECCSHHHHHHHHTCCCC---CCSSEEEEEEESBS-CCCC-CGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHH----hcCcC-CCEEEECCcHHHHHHHHHhhhc---cCCCCCcEEEEcCC-cCCC-CcccCHHHHHH
Confidence 35677777776654 44332 6789999999999999877541 25889999999998 4566 89999999999
Q ss_pred HhcccCCCCCCCCeEeCCCCCC----HHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceeccCCCCCc
Q 024468 99 GLLSKQVPIVPSHVHSINDSLS----AEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSV 174 (267)
Q Consensus 99 ~ll~~~~~i~~~~~~~~~~~~d----~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAslfP~~~~ 174 (267)
+|++++ +.+..++|.|+...+ ...++..|++.|+.. +++|++++|+|.+||++ +|+...
T Consensus 194 ~la~~~-~~~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~--------------~~~DiailGIG~~~~i~--~~g~~~ 256 (345)
T 2o0m_A 194 VMANKT-GGNYRALYVPEQLSRETYNSLLQEPSIQEVLTLI--------------SHANCVVHSIGRALHMA--ARRKMS 256 (345)
T ss_dssp HHHHHH-TCEECCCCCCSSCCHHHHHHHHTCHHHHHHHHHH--------------HTCSEEEECCEEHHHHH--HHTTCC
T ss_pred HHHHHh-CCceEEEeccccCCHHHHHHHHhChHHHHHHHHH--------------HcCCEEEEccCCchhhh--hcCCCC
Confidence 999998 887878777766541 224578888888863 47999999999999987 777311
Q ss_pred ------cccccc--eE--Eeec-CCCCCC-CCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhC-CCCCCcccccccc
Q 024468 175 ------LDVKNQ--WV--SFIT-DSPKPP-PERITFTLPVINSASIVVVVVTGESKAEAVHLAIDD-LGPNCPSLPARMA 241 (267)
Q Consensus 175 ------~~~~~~--~v--~~~~-~~~~~p-~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~-~~~~~~~~Pas~l 241 (267)
+.+.+. .+ ..++ +...+| .+.|||+++.|++++++++++.|++|+++++.++.+ +.
T Consensus 257 ~~~~~~L~~~~avg~~~~~ffd~~g~~v~~~~~i~i~l~~l~~~~~vi~vA~G~~Ka~Ai~~al~g~~~----------- 325 (345)
T 2o0m_A 257 DDEMVMLKQKNAVAESFGYFFDEEGKVVYKIPRIGLQLKNLQEIPYVVAIAGGKTKAKAIRAYMKNAPK----------- 325 (345)
T ss_dssp HHHHHHHHHTTCCEEETTEEECTTSCEEEECCCSBCCGGGGGGCSEEEEECCSGGGHHHHHHHHTTSCT-----------
T ss_pred HHHHHHHHHCCeEEEeeccccccCCCCcCCCceecCCHHHHcCCCCEEEEEcChHHHHHHHHHHhCCCC-----------
Confidence 011110 00 0121 112345 679999999999999999999999999999999998 64
Q ss_pred ccCCCeEEEEecHHHHhhcc
Q 024468 242 QPTNGKLVWFLDKPAASKLQ 261 (267)
Q Consensus 242 ~~~~~~~~~~~D~~Aa~~l~ 261 (267)
.+++++|++||..|.
T Consensus 326 -----~~~LitDe~aA~~ll 340 (345)
T 2o0m_A 326 -----QTWLITDEAAANEIL 340 (345)
T ss_dssp -----TCEEEEEHHHHHHHT
T ss_pred -----CeEEEECHHHHHHHH
Confidence 157789999998764
No 21
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=99.81 E-value=1.3e-19 Score=163.58 Aligned_cols=198 Identities=10% Similarity=0.006 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccC-CCChhhHHHHHH
Q 024468 19 VEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVA-KNHSDSNYKLAK 97 (267)
Q Consensus 19 ~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp-~~~~~Sn~~~l~ 97 (267)
.+++++++|+++.+ .+. +..+|+|++|+||..+|+.+.. ..+|++++|+.+|. -++ .+|++||..++.
T Consensus 92 k~~ia~~AA~~l~~----~i~--~~~~igl~~GsT~~~~~~~L~~----~~~~~~~~vv~l~g-gl~~~~~~~~~~~~i~ 160 (315)
T 2w48_A 92 LSAMGQHGALLVDR----LLE--PGDIIGFSWGRAVRSLVENLPQ----RSQSRQVICVPIIG-GPSGKLESRYHVNTLT 160 (315)
T ss_dssp HHHHHHHHHHHHHH----HCC--TTCEEEECCSHHHHHHHTTSCC----CSSCCCCEEEESBC-BCTTSSCGGGCHHHHH
T ss_pred HHHHHHHHHHHHHH----hCC--CCCEEEECChHHHHHHHHhhcc----ccCCCCcEEEEcCC-CCCCCCccccCHHHHH
Confidence 35577777777654 333 3568999999999999976643 12788999999995 356 789999999999
Q ss_pred HHhcccCCCCCCCCeEeCCCCCC-----HHHHHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceeccCC-C
Q 024468 98 EGLLSKQVPIVPSHVHSINDSLS-----AEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFP-N 171 (267)
Q Consensus 98 ~~ll~~~~~i~~~~~~~~~~~~d-----~~~~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAslfP-~ 171 (267)
++|++++ +....++|.+....+ ...++..|++.|+.. +++|++++|+| ||++++-| +
T Consensus 161 ~~la~~~-~~~~~~l~~P~~~~~~~~~~~l~~~~~~~~~l~~~--------------~~~DiailGIG--g~~~~~g~~~ 223 (315)
T 2w48_A 161 YGAAARL-KAESHLADFPALLDNPLIRNGIMQSQHFKTISSYW--------------DSLDVALVGIG--SPAIRDGANW 223 (315)
T ss_dssp HHHHHHT-TCEECCCCSBSBCSSHHHHHHHHHSHHHHHHHHHH--------------TTCSEEEECCB--CTTCCSSSCH
T ss_pred HHHHHHH-CCceeEeeCCcccCCHHHHHHHHhChHHHHHHHHH--------------hcCCEEEEccC--cchhhcCccc
Confidence 9999999 877777776654422 235678888888863 57999999999 99999864 0
Q ss_pred CCccccc-------cceE-----Eeec-CCCCCC----CCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCc
Q 024468 172 HSVLDVK-------NQWV-----SFIT-DSPKPP----PERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCP 234 (267)
Q Consensus 172 ~~~~~~~-------~~~v-----~~~~-~~~~~p----~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~ 234 (267)
++..+.+ ..-+ ..+. +...+| .+.||||++.|++++++++++.|++|+++++.+|.++..
T Consensus 224 ~~~~~~~~~~~L~~~~avg~~~~rffd~~g~~v~~~~~~~~i~~~l~~i~~~~~ii~vA~G~~Ka~Ai~~al~g~~~--- 300 (315)
T 2w48_A 224 HAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYI--- 300 (315)
T ss_dssp HHHHCTHHHHHHHHTTEEEEETTEEEETTSCBCCCSSGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTSC---
T ss_pred cccCCHHHHHHHHHCCcEEEEECceECCCCCEeCCccccceecCCHHHHhCCCCEEEEecChHhHHHHHHHHhCCCC---
Confidence 0111110 0001 0121 223456 789999999999999999999999999999999999641
Q ss_pred cccccccccCCCeEEEEecHHHHhhc
Q 024468 235 SLPARMAQPTNGKLVWFLDKPAASKL 260 (267)
Q Consensus 235 ~~Pas~l~~~~~~~~~~~D~~Aa~~l 260 (267)
.++++|++||..|
T Consensus 301 -------------~~LitDe~aA~~l 313 (315)
T 2w48_A 301 -------------NCLVTNRETAELL 313 (315)
T ss_dssp -------------SEEEEEHHHHHHH
T ss_pred -------------CEEEECHHHHHHH
Confidence 2678999999875
No 22
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=99.58 E-value=2e-14 Score=126.88 Aligned_cols=199 Identities=12% Similarity=-0.004 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChh-hHHHHHHH
Q 024468 20 EELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSD-SNYKLAKE 98 (267)
Q Consensus 20 ~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~-Sn~~~l~~ 98 (267)
++..+.+++..++.+.+.++ +..+|++++|+|+..+++.+.. .+++++.|+.+++ -++.+++. ++.+.+.+
T Consensus 36 ~~~~~~lg~~aA~~L~~~l~--~~~viGv~wG~T~~~v~~~l~~-----~~~~~~~vV~l~G-g~~~~~~~~~~~n~i~~ 107 (267)
T 3nze_A 36 AETLDRVAMQAARTIGPLVD--SNAIIGVAWGATLSAVSRHLTR-----KMTHDSIVVQLNG-AGNMQTTGITYASDIMR 107 (267)
T ss_dssp HHHHHHHHHHHHHHHGGGCC--SSCEEEECCSHHHHHHHHTCCC-----CCCSSCEEEECSC-CCCTTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC--CCCEEEECCCHHHHHHHHhcCc-----cCCCCCEEEECCC-CCCCCccccccHHHHHH
Confidence 33444455544444445553 4579999999999999876643 4688999999999 45656666 55568888
Q ss_pred HhcccCCCCCCCCeEeCCCCCCHHH-----HHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceeccCCCCC
Q 024468 99 GLLSKQVPIVPSHVHSINDSLSAEE-----AADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHS 173 (267)
Q Consensus 99 ~ll~~~~~i~~~~~~~~~~~~d~~~-----~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAslfP~~~ 173 (267)
.|.+++ +.....+|.|....+++. ....|++.++.. ...|++++|||..+| +|++.
T Consensus 108 ~lA~~~-~~~~~~l~~P~~~~s~~~~~~l~~~~~i~~~l~~~--------------~~~Diai~GIG~~~~----~~~s~ 168 (267)
T 3nze_A 108 RFGSAY-GARVEQFPVPAFFDHASTKTAMWNERSVQRILDLQ--------------ARMSIAIFGVGSVDS----DYPSH 168 (267)
T ss_dssp HHHHHH-TCEEECCCSCSSCSSHHHHHHHTTCHHHHHHHHHH--------------HTCSEEEECCEECC---------C
T ss_pred HHHHHh-CCeEEEeeCCEEcCCHHHHHHHHhChHHHHHHHHH--------------hcCCEEEEecCCCCC----CCCCh
Confidence 899988 776666666655434432 235566666542 478999999999997 33333
Q ss_pred cc-----cc--------c-------cceEEeecCC--CCCCCCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCC
Q 024468 174 VL-----DV--------K-------NQWVSFITDS--PKPPPERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGP 231 (267)
Q Consensus 174 ~~-----~~--------~-------~~~v~~~~~~--~~~p~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~ 231 (267)
.. ++ . .+++..-.+. ...+.+.|||++..|++++++++++.|.+|+++++.+|.++.
T Consensus 169 ~~~~g~~s~~~~~~L~~~gaVGdi~~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~vi~vA~G~~Ka~Ai~aal~g~~- 247 (267)
T 3nze_A 169 VYAGGYLDEHDLTMLAADDVVGDVATVFFRSDGSSDGITLNERSTGPSHEQLRQVRRRICVVSGASKINGLQGALAAGL- 247 (267)
T ss_dssp CCTTSCCCHHHHHHHHHTTEEEEETTEEEETTSCCTTCGGGGGCCSCCHHHHHTSSEEEEEECCGGGHHHHHHHHHTTC-
T ss_pred HHHcCCCCHHHHHHHHHCCcEEEEecccccCCCCCCCcchhcceecCChHHHccCCeEEEEeCChHHHHHHHHHHhcCC-
Confidence 22 11 1 0112111111 011266899999999999999999999999999999999853
Q ss_pred CCccccccccccCCCeEEEEecHHHHhhcc
Q 024468 232 NCPSLPARMAQPTNGKLVWFLDKPAASKLQ 261 (267)
Q Consensus 232 ~~~~~Pas~l~~~~~~~~~~~D~~Aa~~l~ 261 (267)
-+ ++++|+.+|..|-
T Consensus 248 --------------~~-~LITDe~tA~~lL 262 (267)
T 3nze_A 248 --------------AT-DLILDEASARRLV 262 (267)
T ss_dssp --------------CS-EEEEEHHHHHHHT
T ss_pred --------------CC-EEEeCHHHHHHHH
Confidence 12 4678999888763
No 23
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=99.32 E-value=1.1e-11 Score=109.12 Aligned_cols=197 Identities=10% Similarity=-0.026 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCC-CceeEEeeceeccCCCChhhHHHHHHHH
Q 024468 21 ELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDW-AKWYIFWADERVVAKNHSDSNYKLAKEG 99 (267)
Q Consensus 21 ~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w-~~v~~f~~DEr~vp~~~~~Sn~~~l~~~ 99 (267)
++++.+|+++. +.++ +.-+|++++|+|+..+++.+.. ... .++.|+.+.--....+++.++.+.+.+.
T Consensus 45 ~lg~~aA~~L~----~~l~--~~~vIGv~wG~Tl~~v~~~l~~-----~~~~~~~~~V~l~Gg~~~~~~~~~~~n~i~~~ 113 (266)
T 3efb_A 45 MMGLHGAQLLD----RLLE--PGDIVGFSWGRAVSALVENLPQ-----AGQSRQLICVPIIGGPSGKLESRYHVNTLTYS 113 (266)
T ss_dssp HHHHHHHHHHH----HHCC--TTCEEEECCSHHHHHHHHTCCC-----CSSCCCCEEEESBCBCTTSSCGGGCHHHHHHH
T ss_pred HHHHHHHHHHH----HhCC--CCCEEEEcccHHHHHHHHhcCc-----cCCCCCeEEEEcCCCCCCCCccccCHHHHHHH
Confidence 45555555554 4553 4469999999999998876643 122 3677888887545557788888888888
Q ss_pred hcccCCCCCCCCeEeCCCCCCHHH-----HHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceeccCCCCCc
Q 024468 100 LLSKQVPIVPSHVHSINDSLSAEE-----AADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSV 174 (267)
Q Consensus 100 ll~~~~~i~~~~~~~~~~~~d~~~-----~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAslfP~~~~ 174 (267)
|-+++ +.....+|.|..-.+++. ....|++.++.. ...|++++|+|....-.+++-. ..
T Consensus 114 lA~~~-~~~~~~l~aP~~~~~~~~~~~l~~~~~i~~vl~~~--------------~~aDiai~GIG~~~~~~~~~~~-g~ 177 (266)
T 3efb_A 114 AAAKL-KGESHLADFPALLDNPLIRNGIMQSQHFKTISAYW--------------DNLDIALVGIGSPAIRDGANWH-AF 177 (266)
T ss_dssp HHHHT-TCEECCCCSBSBCSSHHHHHHHHTSHHHHHHHHHH--------------HTCSEEEECCBCCC----------C
T ss_pred HHHHh-CCeEEEEeCCeecCCHHHHHHHHhChHHHHHHHHH--------------hcCCEEEEecCCCCCCchhHHh-cC
Confidence 98888 776767776655445432 224455555432 4789999999986432222110 00
Q ss_pred ccc--------ccc---eEEeecCC-CC-CC----CCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCcccc
Q 024468 175 LDV--------KNQ---WVSFITDS-PK-PP----PERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCPSLP 237 (267)
Q Consensus 175 ~~~--------~~~---~v~~~~~~-~~-~p----~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~~~P 237 (267)
+++ ... .+..+.+. .. ++ .+.|||++..|++++++++++.|++|+++++.+|.++.
T Consensus 178 ~s~~~~~~L~~~gaVGdi~~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~~i~va~G~~Ka~Ai~aal~g~~------- 250 (266)
T 3efb_A 178 YGGEESDDLNARQVAGDICSRFFDIHGAMVETNMSEKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRGKY------- 250 (266)
T ss_dssp SCHHHHHHHHHTTCCEEETTEEECTTSCBCCCTTGGGBCBCCHHHHHTSSEEEEECCCSCSSCHHHHHHHTTS-------
T ss_pred CCHHHHHHHHHCCcEEEEecccccCCCCCCCcchhcceecCCHHHHhCCCCEEEEecChHHHHHHHHHHhcCC-------
Confidence 111 110 00011121 11 22 36899999999999999999999999999999999853
Q ss_pred ccccccCCCeEEEEecHHHHhhc
Q 024468 238 ARMAQPTNGKLVWFLDKPAASKL 260 (267)
Q Consensus 238 as~l~~~~~~~~~~~D~~Aa~~l 260 (267)
. + +.++|+.+|..|
T Consensus 251 ------~--~-~LITDe~tA~~l 264 (266)
T 3efb_A 251 ------I--N-CLVTNSSTAELL 264 (266)
T ss_dssp ------C--S-EEEEEHHHHHHH
T ss_pred ------C--C-EEEeCHHHHHHH
Confidence 1 2 467899988765
No 24
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=99.25 E-value=1.7e-11 Score=108.05 Aligned_cols=196 Identities=12% Similarity=0.064 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChhhHHHHHHHH
Q 024468 20 EELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKEG 99 (267)
Q Consensus 20 ~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~l~~~ 99 (267)
+++++++|+++. +.++ +.-+|++++|+|+..+++.+.. .++.++.|+.+.. -++.+++.++...+.+.
T Consensus 39 ~~lg~aaA~~L~----~~l~--~~~vIGv~wG~Tl~~v~~~l~~-----~~~~~~~~V~l~G-G~~~~~~~~~~~~i~~~ 106 (267)
T 3kv1_A 39 KQVAALVSSYLN----NNLQ--EGMAVAVGQGQNVAAVADHAGI-----VTQRNARFVSAIG-GTHRSGDIINADHICRR 106 (267)
T ss_dssp HHHHHHHHHHHH----HHCC--TTCEEEECCSHHHHHHHHCCCC-----CCCCCCEEEESBC-BCC----CCCHHHHHHH
T ss_pred HHHHHHHHHHHH----HhCC--CCCEEEECchHHHHHHHHhccc-----cCCCCCEEEeCCC-CCCCCccccCHHHHHHH
Confidence 445555555554 4553 3469999999999888876543 4667889988877 34566667788888888
Q ss_pred hcccCCCCCCCCeEeCCCCCCHHH-----HHHHHHHHHHHhhhhccccccCCCCCCcceEEEeccCCCCceeccCC----
Q 024468 100 LLSKQVPIVPSHVHSINDSLSAEE-----AADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFP---- 170 (267)
Q Consensus 100 ll~~~~~i~~~~~~~~~~~~d~~~-----~a~~y~~~i~~~~~~~~~~~~~~~~~~~~Dl~lLG~G~DGHiAslfP---- 170 (267)
|.+++ +.....+|.|..-.+++. ....|++.++.. ...|++++|+|..+--++++-
T Consensus 107 lA~~~-~~~~~~l~~P~~~~~~~~~~~l~~~~~i~~vl~~~--------------~~aDiai~GIG~~~~~s~l~~~g~~ 171 (267)
T 3kv1_A 107 LAKKY-GGSSETLYAPAYVNDPSLRSAFMEHATIKETLSQA--------------RKAEFALVGIGDMDENSHMVKLGFF 171 (267)
T ss_dssp HHHHH-TCEEECCCSBSBCSSHHHHHHHHTSHHHHHHHHHH--------------HTCSEEEEEEEEHHHHTHHHHTTSS
T ss_pred HHHHh-CCeEEEEecCcccCCHHHHHHHHhChHHHHHHHHH--------------HhCCEEEEeCCCCCCccHHHHhCCC
Confidence 88888 765656665554444431 124455555532 478999999998873222221
Q ss_pred -CCC--cc-ccc-------c-ceEEeecCCCCCC----CCeEEeCHHHHHhccceeEEEeCccHHHHHHHHHhCCCCCCc
Q 024468 171 -NHS--VL-DVK-------N-QWVSFITDSPKPP----PERITFTLPVINSASIVVVVVTGESKAEAVHLAIDDLGPNCP 234 (267)
Q Consensus 171 -~~~--~~-~~~-------~-~~v~~~~~~~~~p----~~riTl~~~~i~~A~~iill~~G~~K~~~l~~~l~~~~~~~~ 234 (267)
... .+ .+. . +++.. +...++ .+.|||++..|++++++++++.|..|+++++.+|.++.
T Consensus 172 ~~~~~~~L~~~~gaVGdi~g~rffD~--~G~~v~~~~~~~~i~~~l~~l~~~~~~i~va~G~~K~~ai~~al~~~~---- 245 (267)
T 3kv1_A 172 TPKEFVEARLNDGIVGDIGGFDFFKL--DGTDADTLMRGRVIGLEMEDLRQIPNVVAMASESRKALSIMGALRTGV---- 245 (267)
T ss_dssp CHHHHHHHHHTTCEEEEETTTEEEET--TSCBCCCGGGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTSC----
T ss_pred CHHHHHHHHHhcCCEEEEcchHhhcC--CCCEeccccccceeecCHHHHcCCCcEEEEecChHHHHHHHHHHhcCC----
Confidence 110 11 110 1 11211 111222 36899999999999999999999999999999999853
Q ss_pred cccccccccCCCeEEEEecHHHHhhc
Q 024468 235 SLPARMAQPTNGKLVWFLDKPAASKL 260 (267)
Q Consensus 235 ~~Pas~l~~~~~~~~~~~D~~Aa~~l 260 (267)
-+ +.++|+.+|..|
T Consensus 246 -----------~~-~LITDe~tA~~l 259 (267)
T 3kv1_A 246 -----------ID-VLATSVSCAMAL 259 (267)
T ss_dssp -----------CS-EEEEEHHHHHHH
T ss_pred -----------CC-EEEeCHHHHHHH
Confidence 12 467899988865
No 25
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=70.53 E-value=6.2 Score=32.13 Aligned_cols=46 Identities=9% Similarity=-0.102 Sum_probs=30.0
Q ss_pred HHHhcCcEEEEEcCCC-hHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 37 SVKERGVFAIALSGGS-LIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 37 ~i~~~~~~~l~lsGGs-tp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
.+.+...+.|+|+||. |...+++.+.-.+-++. ...|.+++.+.+|
T Consensus 93 ~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~-~kPvvll~~~g~~ 139 (191)
T 1t35_A 93 KMSELADGFISMPGGFGTYEELFEVLCWAQIGIH-QKPIGLYNVNGYF 139 (191)
T ss_dssp HHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSC-CCCEEEECGGGTT
T ss_pred HHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCC-CCCEEEecCCccc
Confidence 4456688999999993 44566665542222332 3668888888887
No 26
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=70.50 E-value=35 Score=29.52 Aligned_cols=45 Identities=11% Similarity=0.010 Sum_probs=28.2
Q ss_pred HHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 38 VKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 38 i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
+...+++.+++|||..=..+..++.... ....++++..+.+|.-+
T Consensus 21 ~~~~~~vlva~SGG~DS~~Ll~ll~~~~-~~~g~~~v~av~vd~g~ 65 (317)
T 1wy5_A 21 FSGERRVLIAFSGGVDSVVLTDVLLKLK-NYFSLKEVALAHFNHML 65 (317)
T ss_dssp CSSCCEEEEECCSSHHHHHHHHHHHHST-TTTTCSEEEEEEEECCS
T ss_pred CCCCCEEEEEecchHHHHHHHHHHHHHH-HHcCCCEEEEEEEECCC
Confidence 3456789999999955434444443321 23456658888888754
No 27
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=55.02 E-value=15 Score=29.78 Aligned_cols=66 Identities=12% Similarity=0.120 Sum_probs=40.1
Q ss_pred HHHHHHHHHhcC-cEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChhhHHHHHHHHhcccCCCCC
Q 024468 31 ADLSEASVKERG-VFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKEGLLSKQVPIV 108 (267)
Q Consensus 31 ~~~i~~~i~~~~-~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~l~~~ll~~~~~i~ 108 (267)
.+.++.++++.+ ++.|++|||..=..+..++... . .++.++.+|.-+-+ ++ .+.++++ +.+.+ +++
T Consensus 33 ~~~l~~~~~~~~~~v~Va~SGGkDS~vLL~ll~~~---~---~~v~~v~vd~g~~~---~e-~~~~v~~-~~~~~-gi~ 99 (215)
T 1sur_A 33 EGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQI---R---PDIPVILTDTGYLF---PE-TYRFIDE-LTDKL-KLN 99 (215)
T ss_dssp HHHHHHHHHHCCSEEEEECCCCTTHHHHHHHHHHH---S---TTCEEEEEECSCBC---HH-HHHHHHH-HHHHT-TCE
T ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHh---C---CCCeEEEeeCCCCC---HH-HHHHHHH-HHHHh-CCc
Confidence 445667777765 8999999996655666665542 1 35777888864421 22 3444443 44445 553
No 28
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- RNA-binding, methylation, mRNA processing, mRNA S nucleus; HET: ADP; 2.60A {Homo sapiens} PDB: 4a4d_A
Probab=51.20 E-value=71 Score=25.81 Aligned_cols=65 Identities=15% Similarity=0.137 Sum_probs=38.9
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCC------------------hHHHHHHHhcccCCCCCCCC
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGS------------------LIGLMGKLCEAPYNKTVDWA 72 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGs------------------tp~~l~~ll~~~~~~~i~w~ 72 (267)
.-+++.++. +++.+..+.+.+ .....+--...+.||. ||..+..++.. ..++++
T Consensus 104 ~~lil~Pt~-~L~~Q~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~I~v~Tp~~l~~~l~~---~~~~~~ 175 (242)
T 3fe2_A 104 ICLVLAPTR-ELAQQVQQVAAE----YCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC---GKTNLR 175 (242)
T ss_dssp SEEEECSSH-HHHHHHHHHHHH----HHHHTTCCEEEECTTSCHHHHHHHHHHCCSEEEECHHHHHHHHHH---TSCCCT
T ss_pred EEEEEeCcH-HHHHHHHHHHHH----HHhhcCceEEEEECCCChHHHHHHhcCCCCEEEECHHHHHHHHHc---CCCCcc
Confidence 356777776 555555555543 3333344455566664 34445444433 356788
Q ss_pred ceeEEeeceec
Q 024468 73 KWYIFWADERV 83 (267)
Q Consensus 73 ~v~~f~~DEr~ 83 (267)
++.++-+||--
T Consensus 176 ~~~~lViDEah 186 (242)
T 3fe2_A 176 RTTYLVLDEAD 186 (242)
T ss_dssp TCCEEEETTHH
T ss_pred cccEEEEeCHH
Confidence 99999999964
No 29
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=47.39 E-value=26 Score=29.59 Aligned_cols=62 Identities=8% Similarity=-0.083 Sum_probs=39.7
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceecc
Q 024468 20 EELSTNLAD--YIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVV 84 (267)
Q Consensus 20 ~~l~~~~a~--~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~v 84 (267)
+.+.+.+.. .-.+.|+.++++-+++.+++|||..=..+..++...... =.++.++++|.-+-
T Consensus 18 ~~~~~~~~~~~~~~~~l~~a~~~~~~v~va~SGGkDS~vLL~ll~~~~~~---~~~i~vv~iDtg~~ 81 (261)
T 2oq2_A 18 DHWNEQLIKLETPQEIIAWSIVTFPHLFQTTAFGLTGLVTIDMLSKLSEK---YYMPELLFIDTLHH 81 (261)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHCSSEEEECCCCHHHHHHHHHHHHHTTT---SCCCEEEEECCSCB
T ss_pred HHHHHHHhcccCHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCcc---CCCeeEEEecCCCC
Confidence 445555443 234567778888889999999996655666666542111 13567888887653
No 30
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=45.58 E-value=18 Score=30.98 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=19.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhcC---cEEEEEcCC
Q 024468 18 SVEELSTNLADYIADLSEASVKERG---VFAIALSGG 51 (267)
Q Consensus 18 ~~~~l~~~~a~~i~~~i~~~i~~~~---~~~l~lsGG 51 (267)
|+++..+.+ ...|++.+++.+ .++|+||||
T Consensus 18 ~~~~~i~~~----~~~L~~~l~~~g~~~~vvvglSGG 50 (275)
T 1wxi_A 18 NAEEEIRRS----VDFLKSYLQTYPFIKSLVLGISGG 50 (275)
T ss_dssp CHHHHHHHH----HHHHHHHHHHSTTCCEEEEECCSS
T ss_pred CHHHHHHHH----HHHHHHHHHHcCCCCCEEEECcCc
Confidence 445444444 445556666655 899999999
No 31
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=43.22 E-value=22 Score=29.47 Aligned_cols=46 Identities=11% Similarity=0.014 Sum_probs=26.9
Q ss_pred HHHhcCcEEEEEcCCC-hHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 37 SVKERGVFAIALSGGS-LIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 37 ~i~~~~~~~l~lsGGs-tp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
.+.....+.|+|+||. |...+++.+...+.+++....|.+++.+ +|
T Consensus 127 ~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~~-~w 173 (217)
T 1wek_A 127 LFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDRG-YW 173 (217)
T ss_dssp HHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECHH-HH
T ss_pred HHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCcc-cc
Confidence 4556678999999994 3455555443211233344567666653 55
No 32
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=40.88 E-value=23 Score=29.80 Aligned_cols=43 Identities=28% Similarity=0.341 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhc
Q 024468 18 SVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCE 62 (267)
Q Consensus 18 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~ 62 (267)
|.++..+.+.+.|.+.+++ ...+++.++||||-.=..+..++.
T Consensus 8 ~~~~~~~~l~~~l~~~v~~--~~~~~vvv~lSGGiDSsv~a~l~~ 50 (249)
T 3fiu_A 8 SPKEYSQKLVNWLSDSCMN--YPAEGFVIGLSGGIDSAVAASLAV 50 (249)
T ss_dssp CHHHHHHHHHHHHHHHHHT--TTCSEEEEECCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH--hCCCCEEEEecCcHHHHHHHHHHH
Confidence 6666666666666544332 123568999999943223333443
No 33
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=40.30 E-value=13 Score=30.79 Aligned_cols=46 Identities=13% Similarity=0.044 Sum_probs=28.8
Q ss_pred HHHhcCcEEEEEcCCC-hHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 37 SVKERGVFAIALSGGS-LIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 37 ~i~~~~~~~l~lsGGs-tp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
.+.+...+.|+|+||. |...+++.+.-.+. .+....|.+++.+.+|
T Consensus 101 ~~~~~sda~I~lpGG~GTLdElfE~lt~~ql-g~~~kPvvll~~~gfw 147 (216)
T 1ydh_A 101 AMAQEAEAFIALPGGYGTMEELLEMITWSQL-GIHKKTVGLLNVDGYY 147 (216)
T ss_dssp HHHHHCSEEEECSCSHHHHHHHHHHHHHHHH-TSCCCEEEEECGGGTT
T ss_pred HHHHhCCEEEEeCCCccHHHHHHHHHHHHHh-cccCCCEEEecCCccc
Confidence 3456678999999993 44556654331111 1344567788888887
No 34
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=39.51 E-value=14 Score=30.24 Aligned_cols=45 Identities=18% Similarity=0.087 Sum_probs=27.6
Q ss_pred HHhcCcEEEEEcCC-ChHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 38 VKERGVFAIALSGG-SLIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 38 i~~~~~~~l~lsGG-stp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
+.+...+.|+|+|| -|...+++.+.-.+-+ +.-+.|.+++.+.+|
T Consensus 114 m~~~sda~IalPGG~GTldEl~e~lt~~qlg-~~~kPvvlln~~gfw 159 (199)
T 3qua_A 114 MEHRSDAFIALPGGIGTLEEFFEAWTAGYLG-MHDKPLILLDPFGHY 159 (199)
T ss_dssp HHHHCSEEEECSCCHHHHHHHHHHHHHHHTT-SCCCCEEEECTTSTT
T ss_pred HHHhcCccEEeCCCccHHHHHHHHHHHHHhc-cCCCCEEEEcCCccc
Confidence 34567899999999 3445666544311111 223567778888877
No 35
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=37.64 E-value=34 Score=28.86 Aligned_cols=58 Identities=17% Similarity=0.255 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeecee
Q 024468 18 SVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADER 82 (267)
Q Consensus 18 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr 82 (267)
|.+++.+.+.+.|.+.++. ...+++.++||||-.=..+..++... .. .++..+.+|-.
T Consensus 4 ~~~~~~~~l~~~l~~~v~~--~~~~~vvv~lSGGiDSsv~~~l~~~~----~~-~~v~av~~~~~ 61 (268)
T 1xng_A 4 DYQKLIVYLCDFLEKEVQK--RGFKKVVYGLSGGLDSAVVGVLCQKV----FK-ENAHALLMPSS 61 (268)
T ss_dssp CHHHHHHHHHHHHHHHHHH--TTCCCEEEECCSSHHHHHHHHHHHHH----HG-GGEEEEECCCS
T ss_pred CHHHHHHHHHHHHHHHHHH--hCCCCEEEEccCcHHHHHHHHHHHHh----CC-CCEEEEEeCCC
Confidence 3555666665555544332 13467999999993322333333221 01 35777777754
No 36
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=36.56 E-value=38 Score=28.76 Aligned_cols=30 Identities=20% Similarity=0.401 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHh--cCcEEEEEcCC
Q 024468 18 SVEELSTNLADYIADLSEASVKE--RGVFAIALSGG 51 (267)
Q Consensus 18 ~~~~l~~~~a~~i~~~i~~~i~~--~~~~~l~lsGG 51 (267)
+.++..+.+...|. +.+++ .+.++|+||||
T Consensus 17 ~~~~~i~~~~~~L~----d~v~~~g~~~vvvgLSGG 48 (271)
T 1kqp_A 17 DPKQEIEDRVNFLK----QYVKKTGAKGFVLGISGG 48 (271)
T ss_dssp CHHHHHHHHHHHHH----HHHHHHTCCEEEEECCSS
T ss_pred CHHHHHHHHHHHHH----HHHHHcCCCCEEEECCCC
Confidence 45555555554444 45543 36799999999
No 37
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=36.25 E-value=55 Score=27.41 Aligned_cols=57 Identities=19% Similarity=0.446 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHh--cCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 18 SVEELSTNLADYIADLSEASVKE--RGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 18 ~~~~l~~~~a~~i~~~i~~~i~~--~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
|.+++.+++...|.+ .+++ .+++.++||||-.=..+..++... +. .++..+.+|-..
T Consensus 5 ~~~~~~~~l~~~l~d----~v~~~g~~~vvv~lSGGiDSsv~a~l~~~~----~g-~~v~av~~~~~~ 63 (249)
T 3p52_A 5 DWQKITEKMCDFIQE----KVKNSQSQGVVLGLSGGIDSALVATLCKRA----LK-ENVFALLMPTQI 63 (249)
T ss_dssp CHHHHHHHHHHHHHH----HHHTSSCSEEEEECCSSHHHHHHHHHHHHH----HT-TSEEEEECCSCC
T ss_pred CHHHHHHHHHHHHHH----HHHHhCCCCEEEEcCCCHHHHHHHHHHHHH----cC-CcEEEEEecCCC
Confidence 566666666666655 4544 457899999994322333333321 11 467777777543
No 38
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=35.34 E-value=45 Score=27.84 Aligned_cols=46 Identities=9% Similarity=-0.011 Sum_probs=31.5
Q ss_pred HHHHHHHHhcC-cEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 32 DLSEASVKERG-VFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 32 ~~i~~~i~~~~-~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
+.|+.+++..+ ++.+++|||..=..+..++.... .++.++.+|--+
T Consensus 35 ~~l~~a~~~~~~~v~va~SGG~DS~vLL~ll~~~~------~~v~vv~idtg~ 81 (252)
T 2o8v_A 35 GRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIR------PDIPVILTDTGY 81 (252)
T ss_dssp HHHHHHHTTSCSCEEEECCCSTTHHHHHHHHHHHS------TTCEEEECCCSC
T ss_pred HHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHhC------CCCeEEEecCCC
Confidence 45566777765 89999999966556666665421 357788888654
No 39
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=31.41 E-value=49 Score=28.66 Aligned_cols=69 Identities=13% Similarity=0.097 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChhhHHHHHHHHhcccCCCCC
Q 024468 29 YIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKEGLLSKQVPIV 108 (267)
Q Consensus 29 ~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~l~~~ll~~~~~i~ 108 (267)
.+.+.|++.+. .+++.+++|||..=..+..++... +. .++..+.+|....+. .....+++.+-+.+ +++
T Consensus 9 ~~~~~ir~~v~-~~kvlvalSGGvDSsvla~ll~~~----~g-~~v~av~vd~g~~~~----~e~~~~~~~~a~~l-gi~ 77 (308)
T 2dpl_A 9 EKVREIRETVG-DSKAIIALSGGVDSSTAAVLAHKA----IG-DRLHAVFVNTGFLRK----GEPEFVVKTFRDEF-GMN 77 (308)
T ss_dssp HHHHHHHHHHT-TSCEEEECCSSHHHHHHHHHHHHH----HG-GGEEEEEEECSCCCT----THHHHHHHHHTTTT-CCE
T ss_pred HHHHHHHHHhC-CCCEEEEEeChHHHHHHHHHHHHh----hC-CCEEEEEEcCCCCCh----HHHHHHHHHHHHHc-CCc
Confidence 33444445554 478999999994422333333321 11 367788888765432 22334555454556 553
No 40
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=30.04 E-value=41 Score=28.94 Aligned_cols=32 Identities=13% Similarity=0.158 Sum_probs=19.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCC
Q 024468 18 SVEELSTNLADYIADLSEASVKERGVFAIALSGG 51 (267)
Q Consensus 18 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGG 51 (267)
++++..+...+.|.+.+++. ..+.++|+||||
T Consensus 19 ~~~~~i~~~v~~L~d~l~~~--g~~~vvvglSGG 50 (279)
T 3q4g_A 19 DPQFEIERRVAFIKRKLTEA--RYKSLVLGISGG 50 (279)
T ss_dssp CHHHHHHHHHHHHHHHHHHH--TCCEEEEECCSS
T ss_pred CHHHHHHHHHHHHHHHHHHc--CCCCEEEEccCC
Confidence 45555555555555443332 235799999999
No 41
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, N project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=29.52 E-value=1.6e+02 Score=23.67 Aligned_cols=65 Identities=14% Similarity=0.063 Sum_probs=36.6
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCCh------------------HHHHHHHhcccCCCCCCCC
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGSL------------------IGLMGKLCEAPYNKTVDWA 72 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGst------------------p~~l~~ll~~~~~~~i~w~ 72 (267)
.-+++.++. +++.+..+.+.+ .....+.-+..+.||.. |..+..++.. ..++++
T Consensus 102 ~~lil~Pt~-~L~~q~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~Ivv~Tp~~l~~~l~~---~~~~~~ 173 (253)
T 1wrb_A 102 KCLILAPTR-ELAIQILSESQK----FSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEK---NKISLE 173 (253)
T ss_dssp SEEEECSSH-HHHHHHHHHHHH----HHTTSSCCEEEECSSSCSHHHHHHHSSCCSEEEECHHHHHHHHHT---TSBCCT
T ss_pred eEEEEECCH-HHHHHHHHHHHH----HhccCCceEEEEECCCCHHHHHHHhCCCCCEEEECHHHHHHHHHc---CCCChh
Confidence 456667775 555555555543 22222333445566643 3344444433 356788
Q ss_pred ceeEEeeceec
Q 024468 73 KWYIFWADERV 83 (267)
Q Consensus 73 ~v~~f~~DEr~ 83 (267)
++.++-+||--
T Consensus 174 ~~~~lViDEah 184 (253)
T 1wrb_A 174 FCKYIVLDEAD 184 (253)
T ss_dssp TCCEEEEETHH
T ss_pred hCCEEEEeCHH
Confidence 89999999974
No 42
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=28.37 E-value=95 Score=24.48 Aligned_cols=68 Identities=21% Similarity=0.238 Sum_probs=34.5
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCC------------------hHHHHHHHhcccCCCCCCCCc
Q 024468 12 ELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGS------------------LIGLMGKLCEAPYNKTVDWAK 73 (267)
Q Consensus 12 ~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGs------------------tp~~l~~ll~~~~~~~i~w~~ 73 (267)
-+++.++. +++.+..+.+.+.....-...+.-...+.||. ||..+..++.. ..++.++
T Consensus 75 ~lil~Pt~-~L~~q~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~Iiv~Tp~~l~~~l~~---~~~~~~~ 150 (219)
T 1q0u_A 75 AVITAPTR-ELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKALEKLNVQPHIVIGTPGRINDFIRE---QALDVHT 150 (219)
T ss_dssp EEEECSSH-HHHHHHHHHHHHHHTTSCGGGCCCEEEECCCSHHHHTTCCCSSCCSEEEECHHHHHHHHHT---TCCCGGG
T ss_pred EEEEcCcH-HHHHHHHHHHHHHhhhcccccceEEEEEeCCCCHHHHHHHcCCCCCEEEeCHHHHHHHHHc---CCCCcCc
Confidence 45666664 55556555554322110000123344455654 34445444433 3456677
Q ss_pred eeEEeeceec
Q 024468 74 WYIFWADERV 83 (267)
Q Consensus 74 v~~f~~DEr~ 83 (267)
+.++-+||--
T Consensus 151 ~~~lViDEah 160 (219)
T 1q0u_A 151 AHILVVDEAD 160 (219)
T ss_dssp CCEEEECSHH
T ss_pred ceEEEEcCch
Confidence 8888888863
No 43
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=28.12 E-value=1.5e+02 Score=23.68 Aligned_cols=28 Identities=14% Similarity=0.000 Sum_probs=18.9
Q ss_pred hHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 53 LIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 53 tp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
||..++.++.. ..+..+++.++-+||--
T Consensus 156 Tp~~l~~~l~~---~~~~~~~~~~lViDEah 183 (237)
T 3bor_A 156 TPGRVFDMLNR---RYLSPKWIKMFVLDEAD 183 (237)
T ss_dssp CHHHHHHHHHT---TSSCSTTCCEEEEESHH
T ss_pred CHHHHHHHHHh---CCcCcccCcEEEECCch
Confidence 45566655543 34567788899999964
No 44
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=27.96 E-value=57 Score=28.15 Aligned_cols=32 Identities=16% Similarity=0.330 Sum_probs=19.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCC
Q 024468 18 SVEELSTNLADYIADLSEASVKERGVFAIALSGG 51 (267)
Q Consensus 18 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGG 51 (267)
|.++..+...+.|.+.+++. ..+.++|+||||
T Consensus 25 ~~~~~i~~~v~~L~d~l~~~--g~~~vvvglSGG 56 (285)
T 3dpi_A 25 DARDEAERRIGFVADYLRTA--GLRACVLGISGG 56 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHH--TCCEEEEECCSS
T ss_pred CHHHHHHHHHHHHHHHHHHc--CCCcEEEEccCC
Confidence 45555555555555544332 235789999999
No 45
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=27.59 E-value=1.8e+02 Score=22.25 Aligned_cols=95 Identities=14% Similarity=0.177 Sum_probs=48.1
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhc-CcEEEEEcCCCh------------------HHHHHHHhcccCCCCCCCC
Q 024468 12 ELRIHESVEELSTNLADYIADLSEASVKER-GVFAIALSGGSL------------------IGLMGKLCEAPYNKTVDWA 72 (267)
Q Consensus 12 ~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~-~~~~l~lsGGst------------------p~~l~~ll~~~~~~~i~w~ 72 (267)
-+++.++. +++....+.+.+ ..... +.-+..+.||.. |..+...+.. ..+..+
T Consensus 74 ~lil~Pt~-~L~~q~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~T~~~l~~~~~~---~~~~~~ 145 (206)
T 1vec_A 74 AMVIVPTR-ELALQVSQICIQ----VSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKK---GVAKVD 145 (206)
T ss_dssp EEEECSCH-HHHHHHHHHHHH----HTTTSSSCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHT---TCSCCT
T ss_pred EEEEeCcH-HHHHHHHHHHHH----HHhhcCCceEEEEeCCccHHHHHHhcCCCCCEEEeCHHHHHHHHHc---CCcCcc
Confidence 55666665 555555555543 22222 223444566643 3444444433 346778
Q ss_pred ceeEEeeceec-cCCCChhhHHHHHHHHhcccCCCCCCCCeEeCCCCCC
Q 024468 73 KWYIFWADERV-VAKNHSDSNYKLAKEGLLSKQVPIVPSHVHSINDSLS 120 (267)
Q Consensus 73 ~v~~f~~DEr~-vp~~~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~~d 120 (267)
++.++-+||-- +... ++...+++ ++..+ + +..++..+..+.+
T Consensus 146 ~~~~lViDEah~~~~~---~~~~~l~~-i~~~~-~-~~~~~l~~SAT~~ 188 (206)
T 1vec_A 146 HVQMIVLDEADKLLSQ---DFVQIMED-IILTL-P-KNRQILLYSATFP 188 (206)
T ss_dssp TCCEEEEETHHHHTST---TTHHHHHH-HHHHS-C-TTCEEEEEESCCC
T ss_pred cCCEEEEEChHHhHhh---CcHHHHHH-HHHhC-C-ccceEEEEEeeCC
Confidence 89999999986 3322 23333333 33434 2 1345666654443
No 46
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=27.45 E-value=53 Score=27.36 Aligned_cols=54 Identities=13% Similarity=0.139 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeecee
Q 024468 19 VEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADER 82 (267)
Q Consensus 19 ~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr 82 (267)
.+++.+.+.+.|.+ . ..+++.++||||-.=..+..++... ..-.+|+.+.+|-.
T Consensus 6 ~~~~~~~l~~~i~~----~--~~~~vvv~lSGGiDSs~~~~l~~~~----~g~~~v~av~~~~~ 59 (257)
T 2e18_A 6 YDKVIERILEFIRE----K--GNNGVVIGISGGVDSATVAYLATKA----LGKEKVLGLIMPYF 59 (257)
T ss_dssp HHHHHHHHHHHHHH----H--CTTCEEEECCSSHHHHHHHHHHHHH----HCGGGEEEEECCSS
T ss_pred HHHHHHHHHHHHHH----h--CCCcEEEEecCCHHHHHHHHHHHHh----cCCCcEEEEEeCCC
Confidence 45555554444443 3 4578999999993322333333221 01135777777754
No 47
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomi consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=26.04 E-value=1.7e+02 Score=22.98 Aligned_cols=63 Identities=19% Similarity=0.225 Sum_probs=35.8
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCC------------------hHHHHHHHhcccCCCCCCCCc
Q 024468 12 ELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGS------------------LIGLMGKLCEAPYNKTVDWAK 73 (267)
Q Consensus 12 ~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGs------------------tp~~l~~ll~~~~~~~i~w~~ 73 (267)
-+++.++. +++.+..+.+.+ +...+.-...+.||. ||..+..++.. ..++.++
T Consensus 97 ~lil~Pt~-~L~~q~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiv~Tp~~l~~~~~~---~~~~~~~ 167 (228)
T 3iuy_A 97 MLVLTPTR-ELALHVEAECSK-----YSYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMN---NSVNLRS 167 (228)
T ss_dssp EEEECSSH-HHHHHHHHHHHH-----HCCTTCCEEEECC------CHHHHHSCCSEEEECHHHHHHHHHT---TCCCCTT
T ss_pred EEEEeCCH-HHHHHHHHHHHH-----hcccCceEEEEECCCChHHHHHHhcCCCCEEEECHHHHHHHHHc---CCcCccc
Confidence 46667775 565666655543 222334455556654 34444444433 3567888
Q ss_pred eeEEeeceec
Q 024468 74 WYIFWADERV 83 (267)
Q Consensus 74 v~~f~~DEr~ 83 (267)
+.++-+||--
T Consensus 168 ~~~lViDEah 177 (228)
T 3iuy_A 168 ITYLVIDEAD 177 (228)
T ss_dssp CCEEEECCHH
T ss_pred ceEEEEECHH
Confidence 9999999964
No 48
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=24.84 E-value=1.4e+02 Score=25.78 Aligned_cols=64 Identities=16% Similarity=0.116 Sum_probs=37.7
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCC------------------hHHHHHHHhcccCCCCCCCCc
Q 024468 12 ELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGS------------------LIGLMGKLCEAPYNKTVDWAK 73 (267)
Q Consensus 12 ~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGs------------------tp~~l~~ll~~~~~~~i~w~~ 73 (267)
-+++.++. +++.+.++.+.+ .....+--+..+.||. ||..+..++.. ..+++++
T Consensus 104 ~lil~Pt~-~L~~q~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~I~v~Tp~~l~~~l~~---~~~~~~~ 175 (417)
T 2i4i_A 104 SLVLAPTR-ELAVQIYEEARK----FSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMER---GKIGLDF 175 (417)
T ss_dssp EEEECSSH-HHHHHHHHHHHH----HHTTSSCCEEEECSSSCHHHHHHHHTTCCSEEEECHHHHHHHHHT---TSBCCTT
T ss_pred EEEECCcH-HHHHHHHHHHHH----HhCcCCceEEEEECCCCHHHHHHHhhCCCCEEEEChHHHHHHHHc---CCcChhh
Confidence 56677775 555566555543 2222233344556664 45555554443 3567888
Q ss_pred eeEEeeceec
Q 024468 74 WYIFWADERV 83 (267)
Q Consensus 74 v~~f~~DEr~ 83 (267)
+.++-+||--
T Consensus 176 ~~~iViDEah 185 (417)
T 2i4i_A 176 CKYLVLDEAD 185 (417)
T ss_dssp CCEEEESSHH
T ss_pred CcEEEEEChh
Confidence 9999999975
No 49
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=23.53 E-value=1.7e+02 Score=24.70 Aligned_cols=46 Identities=11% Similarity=-0.071 Sum_probs=29.9
Q ss_pred ChhhHHHHHHHHhcccCCCCCCCCeEeCCCCCCHHHHHHHHHHHHHH
Q 024468 88 HSDSNYKLAKEGLLSKQVPIVPSHVHSINDSLSAEEAADEYEFDIRQ 134 (267)
Q Consensus 88 ~~~Sn~~~l~~~ll~~~~~i~~~~~~~~~~~~d~~~~a~~y~~~i~~ 134 (267)
+..|-...|++.+.+.. ++|++.|+.=+.+.+-.+.+..-.+.+++
T Consensus 94 ~~~sEA~~m~~~l~~~~-GVp~~~IllE~~S~nT~ENa~~s~~ll~~ 139 (266)
T 3ca8_A 94 TGRAEATILADIAHQFW-HIPHEKIWIEDQSTNCGENARFSIALLNQ 139 (266)
T ss_dssp TTSCHHHHHHHHHHHTT-CCCGGGEEEECCCCSHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHhc-CCCHHHEEeCCCCccHHHHHHHHHHHHHh
Confidence 34566778888887766 68888887655555665555544455543
No 50
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=23.34 E-value=1.8e+02 Score=26.91 Aligned_cols=48 Identities=13% Similarity=0.142 Sum_probs=28.8
Q ss_pred HHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCC
Q 024468 32 DLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAK 86 (267)
Q Consensus 32 ~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~ 86 (267)
+.+++.+ ..+++.+++|||..=..+..++... . .++..+.+|..+.+.
T Consensus 201 ~~ir~~~-~~~kvvvalSGGvDSsvla~ll~~~---g---~~v~av~vd~g~~~~ 248 (503)
T 2ywb_A 201 REVRERA-GKDRVLLAVSGGVDSSTLALLLAKA---G---VDHLAVFVDHGLLRL 248 (503)
T ss_dssp HHHHHHH-TTSEEEEEECSSHHHHHHHHHHHHH---T---CEEEEEEEECSCSCT
T ss_pred Hhhhhhc-cCccEEEEecCCcchHHHHHHHHHc---C---CeEEEEEEeCCCCCh
Confidence 3344444 3378999999994433333444332 1 567888888766543
No 51
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=22.81 E-value=3.2e+02 Score=25.11 Aligned_cols=75 Identities=17% Similarity=0.121 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChhhHHHHH
Q 024468 17 ESVEELSTNLADYIADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLA 96 (267)
Q Consensus 17 ~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~l 96 (267)
.+.++..+.+-+.+.+.++..+....+..+.||||-.=..+..++... . .+++.|.++= +..++....+.+
T Consensus 214 ~~~~~~~~~l~~~L~~aV~~rl~sd~~v~v~LSGGlDSs~vaala~~~----~--~~~~~~t~~~---~~~~E~~~A~~v 284 (503)
T 1q15_A 214 LPREPLLALIDRYLNAPLEDLAPRFDTVGIPLSGGLDSSLVTALASRH----F--KKLNTYSIGT---ELSNEFEFSQQV 284 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGGGCSEEEEECCSSHHHHHHHHHHTTT----C--SEEEEEEEEE---TTBCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCcEEEECCCCHHHHHHHHHHHHh----C--CCcEEEEEeC---CCccHHHHHHHH
Confidence 356777777777777777666666778889999994433444454432 1 3455555431 222344445555
Q ss_pred HHHh
Q 024468 97 KEGL 100 (267)
Q Consensus 97 ~~~l 100 (267)
-++|
T Consensus 285 A~~l 288 (503)
T 1q15_A 285 ADAL 288 (503)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4444
No 52
>3ber_A Probable ATP-dependent RNA helicase DDX47; DEAD, AMP, structural genomics, structural GEN consortium, SGC, ATP-binding, hydrolase; HET: AMP PGE; 1.40A {Homo sapiens}
Probab=22.27 E-value=1.9e+02 Score=23.37 Aligned_cols=65 Identities=18% Similarity=0.165 Sum_probs=36.1
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCC------------------hHHHHHHHhcccCCCCCCCCc
Q 024468 12 ELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGS------------------LIGLMGKLCEAPYNKTVDWAK 73 (267)
Q Consensus 12 ~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGs------------------tp~~l~~ll~~~~~~~i~w~~ 73 (267)
-+++.++. +++...++.+.+ .....+.-...+.||. ||..+..++... ..++.++
T Consensus 114 ~lil~Ptr-~L~~q~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~I~v~Tp~~l~~~l~~~--~~~~l~~ 186 (249)
T 3ber_A 114 ALVLTPTR-ELAFQISEQFEA----LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENT--KGFNLRA 186 (249)
T ss_dssp EEEECSSH-HHHHHHHHHHHH----HHGGGTCCEEEECTTSCHHHHHHHHHTCCSEEEECHHHHHHHHHHS--TTCCCTT
T ss_pred EEEEeCCH-HHHHHHHHHHHH----HhccCCeeEEEEECCCChHHHHHHhcCCCCEEEECHHHHHHHHHcC--CCcCccc
Confidence 46667775 555556655543 2223233344556653 344444444321 2466788
Q ss_pred eeEEeeceec
Q 024468 74 WYIFWADERV 83 (267)
Q Consensus 74 v~~f~~DEr~ 83 (267)
+.++-+||--
T Consensus 187 ~~~lViDEah 196 (249)
T 3ber_A 187 LKYLVMDEAD 196 (249)
T ss_dssp CCEEEECSHH
T ss_pred cCEEEEcChh
Confidence 8899999964
No 53
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=22.10 E-value=74 Score=30.05 Aligned_cols=55 Identities=16% Similarity=0.289 Sum_probs=30.4
Q ss_pred cCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChhhHHHHHHHHh
Q 024468 41 RGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKEGL 100 (267)
Q Consensus 41 ~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~l~~~l 100 (267)
.+++.++||||-.-..+..++... +. .+++.+++|....+.+..+.....+.+.|
T Consensus 255 ~~~vvvalSGGvDSsv~a~ll~~~----~G-~~v~~v~vd~g~~~~~e~~~~~~~~~~~l 309 (556)
T 3uow_A 255 DHYVIAAMSGGIDSTVAAAYTHKI----FK-ERFFGIFIDNGLLRKNEAENVYTFLKSTF 309 (556)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHH----HG-GGEEEEEEECSCSCTTHHHHHHHHHHHHC
T ss_pred CceEEEEcccCCCHHHHHHHHHHH----hC-CeEEEEEEecCCCChHHHHHHHHHHHHhc
Confidence 568899999995433333343321 12 46788888876654333222324444443
No 54
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=21.47 E-value=2.2e+02 Score=24.50 Aligned_cols=66 Identities=15% Similarity=0.088 Sum_probs=37.6
Q ss_pred CcEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCC------------------hHHHHHHHhcccCCCCCCC
Q 024468 10 RGELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGS------------------LIGLMGKLCEAPYNKTVDW 71 (267)
Q Consensus 10 ~~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGs------------------tp~~l~~ll~~~~~~~i~w 71 (267)
..-+++.++. +++.+.++.+.. .....+.-+..+.||. ||..++.++.. ..+..
T Consensus 106 ~~~lil~Pt~-~L~~q~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ivv~Tp~~l~~~l~~---~~~~~ 177 (410)
T 2j0s_A 106 TQALILAPTR-ELAVQIQKGLLA----LGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRR---RSLRT 177 (410)
T ss_dssp CCEEEECSSH-HHHHHHHHHHHH----HTTTTTCCEEEECTTSCHHHHHHHHHHCCSEEEECHHHHHHHHHT---TSSCC
T ss_pred ceEEEEcCcH-HHHHHHHHHHHH----HhccCCeEEEEEECCCCHHHHHHHhhcCCCEEEcCHHHHHHHHHh---CCccH
Confidence 3456666765 566666655543 2222222233445554 55556555543 34667
Q ss_pred CceeEEeeceec
Q 024468 72 AKWYIFWADERV 83 (267)
Q Consensus 72 ~~v~~f~~DEr~ 83 (267)
+++.++-+||--
T Consensus 178 ~~~~~vViDEah 189 (410)
T 2j0s_A 178 RAIKMLVLDEAD 189 (410)
T ss_dssp TTCCEEEEETHH
T ss_pred hheeEEEEccHH
Confidence 888999999975
No 55
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=21.40 E-value=79 Score=27.66 Aligned_cols=38 Identities=13% Similarity=0.232 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEcCCChH-HHHHHHh
Q 024468 24 TNLADYIADLSEASVKERGVFAIALSGGSLI-GLMGKLC 61 (267)
Q Consensus 24 ~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp-~~l~~ll 61 (267)
+.+++.+.+.++++.++.+.-.|+|+||-.- ..+.+.+
T Consensus 231 ~~l~~~l~~~~~~a~~~~g~~~vvlsGGVa~N~~L~~~L 269 (334)
T 3eno_A 231 ETAFAMLVEVLERALYVSGKDEILMAGGVALNRRLRDMV 269 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEESSGGGCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEcCCHHHHHHHHHHH
Confidence 3456666777777777778789999999554 3344433
No 56
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 2.51A {Homo sapiens}
Probab=21.14 E-value=1.6e+02 Score=24.90 Aligned_cols=29 Identities=28% Similarity=0.245 Sum_probs=21.4
Q ss_pred hHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 53 LIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 53 tp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
||..+..++... ..++.+++.++-+||--
T Consensus 217 TP~~l~~~l~~~--~~~~l~~l~~lVlDEad 245 (300)
T 3fmo_B 217 TPGTVLDWCSKL--KFIDPKKIKVFVLDEAD 245 (300)
T ss_dssp CHHHHHHHHTTT--CCCCGGGCSEEEETTHH
T ss_pred CHHHHHHHHHhc--CCCChhhceEEEEeCHH
Confidence 577777766432 35788999999999964
No 57
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=20.98 E-value=1.7e+02 Score=23.21 Aligned_cols=65 Identities=18% Similarity=0.192 Sum_probs=35.6
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHhc-CcEEEEEcCCC-----------------hHHHHHHHhcccCCCCCCCC
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASVKER-GVFAIALSGGS-----------------LIGLMGKLCEAPYNKTVDWA 72 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~-~~~~l~lsGGs-----------------tp~~l~~ll~~~~~~~i~w~ 72 (267)
.-+++.++. +++.+..+.+.+ ..... +--+..+.||. ||..+..++.. ..++.+
T Consensus 94 ~~lil~Pt~-~L~~q~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~Iiv~Tp~~l~~~~~~---~~~~~~ 165 (230)
T 2oxc_A 94 QILILAPTR-EIAVQIHSVITA----IGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIEL---DYLNPG 165 (230)
T ss_dssp CEEEECSSH-HHHHHHHHHHHH----HTTTSTTCCEEEECTTSCHHHHHHHTTSCSEEEECHHHHHHHHHT---TSSCGG
T ss_pred eEEEEeCCH-HHHHHHHHHHHH----HhcccCCceEEEEeCCCCHHHHHHhccCCCEEEECHHHHHHHHhc---CCcccc
Confidence 345666665 566655555543 22222 22233445654 34445544433 346678
Q ss_pred ceeEEeeceec
Q 024468 73 KWYIFWADERV 83 (267)
Q Consensus 73 ~v~~f~~DEr~ 83 (267)
++.++-+||--
T Consensus 166 ~~~~lViDEah 176 (230)
T 2oxc_A 166 SIRLFILDEAD 176 (230)
T ss_dssp GCCEEEESSHH
T ss_pred cCCEEEeCCch
Confidence 88889999964
No 58
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=20.85 E-value=1.9e+02 Score=22.62 Aligned_cols=65 Identities=17% Similarity=0.120 Sum_probs=34.9
Q ss_pred cEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEcCCC-----------------hHHHHHHHhcccCCCCCCCCc
Q 024468 11 GELRIHESVEELSTNLADYIADLSEASVKERGVFAIALSGGS-----------------LIGLMGKLCEAPYNKTVDWAK 73 (267)
Q Consensus 11 ~~~~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGs-----------------tp~~l~~ll~~~~~~~i~w~~ 73 (267)
.-+++.++. +++.+..+.+.+ .....+.-+..+.||. ||..++..+.. ..+..++
T Consensus 84 ~~lil~Pt~-~L~~q~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iiv~Tp~~l~~~~~~---~~~~~~~ 155 (224)
T 1qde_A 84 QALMLAPTR-ELALQIQKVVMA----LAFHMDIKVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQR---RRFRTDK 155 (224)
T ss_dssp CEEEECSSH-HHHHHHHHHHHH----HTTTSCCCEEEECC----------CTTCSEEEECHHHHHHHHHT---TSSCCTT
T ss_pred eEEEEECCH-HHHHHHHHHHHH----HhcccCceEEEEeCCcchHHHHhcCCCCCEEEECHHHHHHHHHh---CCcchhh
Confidence 355666665 555555555543 2222233334445553 34455554443 3567788
Q ss_pred eeEEeeceec
Q 024468 74 WYIFWADERV 83 (267)
Q Consensus 74 v~~f~~DEr~ 83 (267)
+.++-+||--
T Consensus 156 ~~~iViDEah 165 (224)
T 1qde_A 156 IKMFILDEAD 165 (224)
T ss_dssp CCEEEEETHH
T ss_pred CcEEEEcChh
Confidence 8999999964
No 59
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=20.80 E-value=75 Score=25.62 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=27.6
Q ss_pred HhcCcEEEEEcCC-ChHHHHHHHhcccCCCCCCCCceeEEeeceec
Q 024468 39 KERGVFAIALSGG-SLIGLMGKLCEAPYNKTVDWAKWYIFWADERV 83 (267)
Q Consensus 39 ~~~~~~~l~lsGG-stp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~ 83 (267)
.+...+.|+|+|| -|...+++.+.-.+-+ ..-+.|.+++.+.+|
T Consensus 106 ~~~sda~IalPGG~GTLdElfe~lt~~qlg-~~~kPvvlln~~gfw 150 (189)
T 3sbx_A 106 EDRANAFITLPGGVGTLDELLDVWTEGYLG-MHDKSIVVLDPWGHF 150 (189)
T ss_dssp HHHCSEEEECSCCHHHHHHHHHHHHHHHTT-SCCCCEEEECTTCTT
T ss_pred HHHCCEEEEeCCCcchHHHHHHHHHHHHhc-ccCCCEEEecCCccc
Confidence 3557899999999 4456666554311111 123567888888887
No 60
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=20.13 E-value=2.2e+02 Score=27.63 Aligned_cols=61 Identities=16% Similarity=0.097 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCcEEEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCChhhHHHH
Q 024468 30 IADLSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKL 95 (267)
Q Consensus 30 i~~~i~~~i~~~~~~~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~ 95 (267)
+.+.|++.+ .++++.++||||-.=..+..++... +.-.+++.+.+|...-+.++.+.-...
T Consensus 230 ~i~~Ir~~v-~~~~vvv~lSGGvDSsVla~Ll~~a----lG~~~V~aV~vd~g~~~~~e~e~a~~~ 290 (697)
T 2vxo_A 230 CIREIKERV-GTSKVLVLLSGGVDSTVCTALLNRA----LNQEQVIAVHIDNGFMRKRESQSVEEA 290 (697)
T ss_dssp HHHHHHHHH-TTCEEEEECCSSHHHHHHHHHHHHH----SCGGGEEEEEEECSCCCSSTTHHHHHH
T ss_pred HHHHHHHHh-cccceEEEccCchHHHHHHHHHHHh----cCCceEEEEEeccccCCcchHHHHHHH
Confidence 334444444 3478999999994322333343321 111478889999887554443333333
No 61
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=20.11 E-value=68 Score=21.55 Aligned_cols=37 Identities=11% Similarity=0.119 Sum_probs=27.9
Q ss_pred EEEEcCCChHHHHHHHhcccCCCCCCCCceeEEeeceeccCCCC
Q 024468 45 AIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNH 88 (267)
Q Consensus 45 ~l~lsGGstp~~l~~ll~~~~~~~i~w~~v~~f~~DEr~vp~~~ 88 (267)
.+-++.|+|...+.+.+ .++.+.+ ++.++.+.||+++
T Consensus 14 ~~ev~~g~Tv~dLL~~L------gl~~~~V-vV~vNG~~v~~d~ 50 (74)
T 2l32_A 14 EVAVDDDGTYADLVRAV------DLSPHEV-TVLVDGRPVPEDQ 50 (74)
T ss_dssp EEECSTTCSHHHHHHTT------CCCSSCC-CEECCCCCCCTTS
T ss_pred eEEcCCCCcHHHHHHHc------CCCcceE-EEEECCEECCHHH
Confidence 46788898865555433 5677888 7899999999887
Done!