Query 024469
Match_columns 267
No_of_seqs 103 out of 1235
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:49:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024469.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024469hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02965 Probable pheophorbida 100.0 1.5E-40 3.3E-45 278.8 26.3 251 7-266 1-253 (255)
2 PLN02211 methyl indole-3-aceta 100.0 1.9E-37 4.1E-42 262.4 27.3 249 8-265 17-269 (273)
3 PLN02824 hydrolase, alpha/beta 100.0 4.5E-36 9.7E-41 256.7 23.1 250 5-265 25-293 (294)
4 PRK00870 haloalkane dehalogena 100.0 2.9E-35 6.3E-40 252.7 21.8 247 8-265 45-300 (302)
5 KOG4178 Soluble epoxide hydrol 100.0 1.5E-34 3.3E-39 240.5 21.7 252 7-267 42-321 (322)
6 TIGR02240 PHA_depoly_arom poly 100.0 1.2E-34 2.7E-39 245.7 20.7 239 9-266 25-266 (276)
7 PLN02679 hydrolase, alpha/beta 100.0 4.2E-34 9.2E-39 251.1 22.5 250 9-266 88-357 (360)
8 PRK03592 haloalkane dehalogena 100.0 4.4E-34 9.5E-39 244.5 21.8 252 8-265 26-288 (295)
9 PRK03204 haloalkane dehalogena 100.0 4.5E-34 9.7E-39 243.5 21.4 248 8-263 33-285 (286)
10 PRK10349 carboxylesterase BioH 100.0 3.9E-34 8.6E-39 239.9 19.9 236 5-264 9-254 (256)
11 PRK10673 acyl-CoA esterase; Pr 100.0 3.6E-32 7.7E-37 227.4 24.2 234 7-265 14-254 (255)
12 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.4E-32 3E-37 233.3 21.9 244 8-264 29-281 (282)
13 PLN03084 alpha/beta hydrolase 100.0 4.1E-32 8.8E-37 238.6 22.1 247 8-265 126-383 (383)
14 PLN03087 BODYGUARD 1 domain co 100.0 4.3E-32 9.4E-37 243.1 22.2 250 9-264 201-477 (481)
15 PLN02578 hydrolase 100.0 8E-32 1.7E-36 236.2 21.8 244 8-264 85-353 (354)
16 TIGR03056 bchO_mg_che_rel puta 100.0 1.2E-31 2.6E-36 226.5 21.4 246 5-264 23-278 (278)
17 TIGR03611 RutD pyrimidine util 100.0 1.1E-31 2.4E-36 223.4 20.2 232 8-265 12-257 (257)
18 KOG1454 Predicted hydrolase/ac 100.0 5.8E-32 1.3E-36 232.8 17.8 248 8-265 57-323 (326)
19 PRK11126 2-succinyl-6-hydroxy- 100.0 2.5E-31 5.5E-36 220.7 21.0 232 9-265 2-241 (242)
20 TIGR01738 bioH putative pimelo 100.0 2.3E-31 5E-36 219.3 19.0 233 10-263 5-245 (245)
21 PRK06489 hypothetical protein; 100.0 3.4E-31 7.4E-36 232.8 21.1 244 9-265 69-356 (360)
22 PLN02385 hydrolase; alpha/beta 100.0 3E-31 6.4E-36 232.3 18.6 240 9-265 87-344 (349)
23 PRK08775 homoserine O-acetyltr 100.0 1.5E-31 3.2E-36 233.6 15.9 251 5-265 53-338 (343)
24 PF12697 Abhydrolase_6: Alpha/ 100.0 7.1E-32 1.5E-36 219.3 10.5 227 12-258 1-228 (228)
25 PHA02857 monoglyceride lipase; 100.0 7.2E-30 1.6E-34 216.3 21.0 235 10-265 26-272 (276)
26 PLN02298 hydrolase, alpha/beta 100.0 9.8E-30 2.1E-34 221.0 20.3 237 9-265 59-316 (330)
27 TIGR02427 protocat_pcaD 3-oxoa 100.0 8.7E-30 1.9E-34 210.4 18.7 238 9-264 13-251 (251)
28 PRK07581 hypothetical protein; 100.0 7.4E-30 1.6E-34 222.6 17.7 252 10-266 42-336 (339)
29 TIGR03695 menH_SHCHC 2-succiny 100.0 3.9E-29 8.4E-34 206.1 20.9 240 9-264 1-251 (251)
30 PRK10749 lysophospholipase L2; 100.0 4E-29 8.6E-34 217.2 20.1 248 8-265 53-328 (330)
31 TIGR01250 pro_imino_pep_2 prol 100.0 6.6E-29 1.4E-33 209.6 19.8 244 9-264 25-288 (288)
32 KOG4409 Predicted hydrolase/ac 100.0 5.9E-29 1.3E-33 207.9 18.6 246 7-266 88-364 (365)
33 PLN02894 hydrolase, alpha/beta 100.0 4.7E-28 1E-32 215.3 22.6 104 8-113 104-211 (402)
34 PRK00175 metX homoserine O-ace 100.0 1.7E-28 3.6E-33 217.0 18.7 249 9-265 48-373 (379)
35 TIGR01392 homoserO_Ac_trn homo 100.0 1.5E-28 3.3E-33 215.3 17.3 249 9-264 31-351 (351)
36 PRK14875 acetoin dehydrogenase 100.0 9.2E-28 2E-32 211.6 20.1 236 8-265 130-370 (371)
37 PLN02652 hydrolase; alpha/beta 100.0 6.3E-27 1.4E-31 206.9 21.4 239 8-265 135-386 (395)
38 PLN02980 2-oxoglutarate decarb 99.9 6.8E-27 1.5E-31 236.4 19.6 239 9-265 1371-1638(1655)
39 PRK05855 short chain dehydroge 99.9 1.2E-26 2.6E-31 215.7 18.0 250 8-265 24-291 (582)
40 COG2267 PldB Lysophospholipase 99.9 1.1E-25 2.4E-30 192.0 21.3 242 10-265 35-293 (298)
41 TIGR01249 pro_imino_pep_1 prol 99.9 8.1E-26 1.8E-30 194.5 20.5 103 9-113 27-130 (306)
42 PLN02511 hydrolase 99.9 5.7E-25 1.2E-29 194.8 15.7 242 8-265 99-364 (388)
43 KOG2382 Predicted alpha/beta h 99.9 8.2E-24 1.8E-28 176.6 20.1 238 8-265 51-312 (315)
44 TIGR01607 PST-A Plasmodium sub 99.9 3.2E-24 7E-29 186.3 18.2 236 8-264 20-331 (332)
45 KOG1455 Lysophospholipase [Lip 99.9 9.3E-24 2E-28 173.8 18.2 240 9-264 54-310 (313)
46 PRK05077 frsA fermentation/res 99.9 2E-21 4.3E-26 173.2 22.8 212 11-265 195-411 (414)
47 PRK06765 homoserine O-acetyltr 99.9 5E-22 1.1E-26 175.2 18.4 254 9-265 56-387 (389)
48 TIGR03100 hydr1_PEP hydrolase, 99.9 6.3E-22 1.4E-26 167.7 18.1 230 9-264 26-273 (274)
49 KOG2564 Predicted acetyltransf 99.9 7E-23 1.5E-27 166.0 11.3 232 7-265 72-326 (343)
50 COG1647 Esterase/lipase [Gener 99.9 1.3E-21 2.8E-26 153.9 16.3 222 9-265 15-243 (243)
51 PRK11071 esterase YqiA; Provis 99.9 6.8E-21 1.5E-25 152.6 19.7 184 10-264 2-189 (190)
52 PRK10985 putative hydrolase; P 99.9 8.2E-22 1.8E-26 170.9 15.5 230 9-251 58-300 (324)
53 TIGR01838 PHA_synth_I poly(R)- 99.9 4.8E-21 1E-25 173.7 20.5 237 9-253 188-462 (532)
54 COG0596 MhpC Predicted hydrola 99.9 2E-20 4.3E-25 154.1 20.2 246 9-264 21-280 (282)
55 TIGR01836 PHA_synth_III_C poly 99.9 4.2E-20 9E-25 161.9 19.1 251 9-265 62-349 (350)
56 PF00561 Abhydrolase_1: alpha/ 99.9 2.7E-22 5.8E-27 164.3 4.6 214 37-261 1-230 (230)
57 PRK07868 acyl-CoA synthetase; 99.8 7.9E-20 1.7E-24 179.3 19.1 101 8-112 66-176 (994)
58 PLN02872 triacylglycerol lipas 99.8 1.1E-19 2.5E-24 160.3 17.2 252 8-266 73-389 (395)
59 PRK13604 luxD acyl transferase 99.8 5.6E-19 1.2E-23 149.0 20.2 202 9-248 37-246 (307)
60 PRK10566 esterase; Provisional 99.8 9.2E-19 2E-23 146.0 20.1 204 9-266 27-248 (249)
61 KOG2984 Predicted hydrolase [G 99.8 4.4E-20 9.6E-25 143.1 8.4 234 5-265 38-275 (277)
62 TIGR03101 hydr2_PEP hydrolase, 99.8 2.5E-19 5.5E-24 149.9 12.8 103 9-113 25-134 (266)
63 PF12695 Abhydrolase_5: Alpha/ 99.8 1.2E-17 2.6E-22 127.5 14.6 144 11-246 1-145 (145)
64 TIGR03230 lipo_lipase lipoprot 99.7 2.1E-17 4.6E-22 146.2 11.2 109 6-115 38-156 (442)
65 PF06342 DUF1057: Alpha/beta h 99.7 3.9E-16 8.5E-21 128.1 17.5 114 5-120 31-146 (297)
66 PLN00021 chlorophyllase 99.7 1.7E-15 3.7E-20 130.0 18.9 104 8-112 51-165 (313)
67 cd00707 Pancreat_lipase_like P 99.7 1.7E-16 3.6E-21 134.3 9.5 109 6-115 33-149 (275)
68 TIGR02821 fghA_ester_D S-formy 99.7 1.8E-14 3.8E-19 122.2 20.5 105 8-112 41-172 (275)
69 PRK11460 putative hydrolase; P 99.7 4.5E-15 9.7E-20 122.7 16.4 174 7-263 14-209 (232)
70 KOG4667 Predicted esterase [Li 99.7 9.2E-15 2E-19 114.8 16.8 205 9-251 33-244 (269)
71 PLN02442 S-formylglutathione h 99.6 5.3E-14 1.1E-18 119.7 19.5 105 7-112 45-177 (283)
72 COG3208 GrsT Predicted thioest 99.6 7.9E-14 1.7E-18 112.4 17.8 220 9-264 7-234 (244)
73 PF00326 Peptidase_S9: Prolyl 99.6 3.8E-14 8.3E-19 115.6 13.3 195 24-266 2-209 (213)
74 KOG1552 Predicted alpha/beta h 99.6 3.4E-13 7.3E-18 109.5 16.4 189 9-265 60-251 (258)
75 TIGR03502 lipase_Pla1_cef extr 99.5 3.1E-14 6.8E-19 133.5 11.0 89 10-98 450-575 (792)
76 PF00975 Thioesterase: Thioest 99.5 5.5E-13 1.2E-17 109.7 14.6 103 10-115 1-106 (229)
77 PRK10252 entF enterobactin syn 99.5 8.1E-13 1.8E-17 133.8 15.7 102 8-113 1067-1171(1296)
78 PF06821 Ser_hydrolase: Serine 99.5 8.5E-13 1.8E-17 103.6 12.4 155 12-251 1-158 (171)
79 TIGR01839 PHA_synth_II poly(R) 99.5 3.1E-12 6.8E-17 115.7 16.9 101 9-113 215-328 (560)
80 PF12146 Hydrolase_4: Putative 99.5 1.9E-13 4.1E-18 93.1 6.6 64 9-72 16-79 (79)
81 COG0429 Predicted hydrolase of 99.4 8.3E-12 1.8E-16 104.8 17.3 102 9-110 75-182 (345)
82 TIGR01840 esterase_phb esteras 99.4 2.7E-12 5.9E-17 104.6 11.5 106 8-113 12-130 (212)
83 COG1506 DAP2 Dipeptidyl aminop 99.4 8.8E-12 1.9E-16 116.9 15.3 204 10-265 395-615 (620)
84 KOG2931 Differentiation-relate 99.4 1.4E-10 3.1E-15 95.5 19.4 237 8-264 45-304 (326)
85 COG2021 MET2 Homoserine acetyl 99.4 1.6E-11 3.6E-16 104.6 14.4 253 9-265 51-367 (368)
86 KOG1838 Alpha/beta hydrolase [ 99.4 3.6E-11 7.8E-16 104.4 16.0 103 9-112 125-235 (409)
87 PF01738 DLH: Dienelactone hyd 99.4 2.7E-11 5.9E-16 99.1 14.6 165 8-253 13-196 (218)
88 PF10230 DUF2305: Uncharacteri 99.4 3.6E-11 7.7E-16 101.3 15.7 107 9-115 2-124 (266)
89 PF05728 UPF0227: Uncharacteri 99.3 2.5E-10 5.5E-15 90.7 18.9 86 12-113 2-91 (187)
90 PRK10162 acetyl esterase; Prov 99.3 1.6E-10 3.5E-15 100.0 19.1 104 9-113 81-195 (318)
91 KOG2565 Predicted hydrolases o 99.3 1.8E-11 3.9E-16 103.7 12.6 105 6-111 149-262 (469)
92 TIGR00976 /NonD putative hydro 99.3 2.6E-12 5.7E-17 119.1 8.3 102 9-112 22-131 (550)
93 PF02230 Abhydrolase_2: Phosph 99.3 4.3E-11 9.4E-16 97.9 14.3 177 7-265 12-214 (216)
94 PF07819 PGAP1: PGAP1-like pro 99.3 3E-11 6.5E-16 99.1 12.4 101 8-112 3-122 (225)
95 PF03096 Ndr: Ndr family; Int 99.3 1.6E-10 3.5E-15 96.2 16.5 234 8-265 22-278 (283)
96 KOG4391 Predicted alpha/beta h 99.3 1E-10 2.2E-15 92.4 11.6 200 8-265 77-281 (300)
97 PLN02733 phosphatidylcholine-s 99.2 9.4E-11 2E-15 104.7 8.1 89 20-112 105-200 (440)
98 COG3319 Thioesterase domains o 99.2 3.9E-10 8.5E-15 93.5 11.0 101 10-114 1-104 (257)
99 PF06500 DUF1100: Alpha/beta h 99.1 5.9E-10 1.3E-14 97.5 12.3 103 10-113 191-296 (411)
100 PF12740 Chlorophyllase2: Chlo 99.1 4.5E-10 9.7E-15 92.7 8.8 102 10-112 18-130 (259)
101 COG4757 Predicted alpha/beta h 99.1 1.9E-09 4.1E-14 86.1 11.9 229 11-261 32-278 (281)
102 TIGR01849 PHB_depoly_PhaZ poly 99.1 1.3E-08 2.7E-13 89.8 17.4 100 10-113 103-208 (406)
103 PF01674 Lipase_2: Lipase (cla 99.1 2.4E-10 5.2E-15 92.8 5.6 85 10-97 2-94 (219)
104 COG2945 Predicted hydrolase of 99.0 3.9E-08 8.4E-13 76.6 15.8 171 9-264 28-205 (210)
105 COG0400 Predicted esterase [Ge 99.0 6.1E-09 1.3E-13 83.9 11.9 165 10-257 19-200 (207)
106 COG3545 Predicted esterase of 99.0 3E-08 6.6E-13 76.2 13.9 172 9-264 2-177 (181)
107 smart00824 PKS_TE Thioesterase 99.0 7.1E-09 1.5E-13 83.4 10.5 97 14-114 2-103 (212)
108 PF07224 Chlorophyllase: Chlor 98.9 2.7E-09 5.8E-14 86.9 7.6 104 9-113 46-157 (307)
109 PF08538 DUF1749: Protein of u 98.9 9.5E-09 2.1E-13 86.5 9.9 102 9-114 33-149 (303)
110 PRK10115 protease 2; Provision 98.9 6.4E-08 1.4E-12 91.8 16.7 104 9-112 445-558 (686)
111 PF07859 Abhydrolase_3: alpha/ 98.9 4.2E-08 9.1E-13 79.6 13.4 94 12-113 1-110 (211)
112 PF05448 AXE1: Acetyl xylan es 98.9 1.4E-07 3.1E-12 81.4 17.2 208 10-265 84-319 (320)
113 PF00151 Lipase: Lipase; Inte 98.9 9.8E-10 2.1E-14 95.0 3.7 109 7-116 69-190 (331)
114 PF02273 Acyl_transf_2: Acyl t 98.8 2.1E-06 4.5E-11 69.6 18.5 206 9-252 30-242 (294)
115 COG3571 Predicted hydrolase of 98.8 2E-07 4.4E-12 70.5 11.4 104 6-110 11-121 (213)
116 PF06028 DUF915: Alpha/beta hy 98.7 3.7E-08 8E-13 82.0 8.0 105 8-112 10-142 (255)
117 PRK05371 x-prolyl-dipeptidyl a 98.7 1.4E-06 3E-11 83.6 19.7 83 28-112 271-372 (767)
118 KOG4627 Kynurenine formamidase 98.7 3.3E-08 7.1E-13 77.7 6.8 182 8-251 66-252 (270)
119 PF09752 DUF2048: Uncharacteri 98.7 1.5E-06 3.2E-11 74.5 17.4 237 8-264 91-347 (348)
120 PF03403 PAF-AH_p_II: Platelet 98.7 2.6E-08 5.5E-13 88.0 6.6 104 10-114 101-263 (379)
121 COG0657 Aes Esterase/lipase [L 98.7 2.1E-06 4.5E-11 74.2 18.2 102 8-113 78-191 (312)
122 PF05990 DUF900: Alpha/beta hy 98.7 1.1E-07 2.5E-12 78.4 8.9 107 8-114 17-138 (233)
123 COG1075 LipA Predicted acetylt 98.7 7.7E-08 1.7E-12 83.8 8.0 100 9-112 59-163 (336)
124 PF05057 DUF676: Putative seri 98.6 7.7E-08 1.7E-12 78.7 6.1 85 10-96 5-96 (217)
125 COG0412 Dienelactone hydrolase 98.6 4.2E-07 9.1E-12 75.2 10.3 159 10-250 28-206 (236)
126 PF03959 FSH1: Serine hydrolas 98.6 5.2E-07 1.1E-11 73.5 10.5 46 206-252 161-207 (212)
127 KOG2624 Triglyceride lipase-ch 98.6 4.5E-06 9.7E-11 73.7 16.2 105 8-113 72-199 (403)
128 COG3243 PhaC Poly(3-hydroxyalk 98.6 1.7E-06 3.7E-11 75.4 13.2 100 9-112 107-216 (445)
129 PF02129 Peptidase_S15: X-Pro 98.4 1.2E-06 2.7E-11 74.1 8.8 104 9-112 20-135 (272)
130 PF12715 Abhydrolase_7: Abhydr 98.4 1.6E-06 3.4E-11 75.2 8.6 102 9-111 115-258 (390)
131 PF10503 Esterase_phd: Esteras 98.4 5.8E-05 1.3E-09 61.6 17.1 104 9-112 16-131 (220)
132 PRK04940 hypothetical protein; 98.3 2E-06 4.3E-11 67.4 7.6 84 12-113 2-92 (180)
133 COG3458 Acetyl esterase (deace 98.3 1.8E-05 3.9E-10 65.2 13.0 195 9-249 83-303 (321)
134 COG4188 Predicted dienelactone 98.3 2.7E-06 5.9E-11 73.2 7.9 90 10-99 72-180 (365)
135 PF02450 LCAT: Lecithin:choles 98.3 2.7E-06 5.9E-11 75.6 8.2 83 21-112 63-159 (389)
136 KOG3975 Uncharacterized conser 98.3 0.00015 3.2E-09 59.1 17.0 246 5-263 25-300 (301)
137 KOG1515 Arylacetamide deacetyl 98.3 0.0003 6.5E-09 61.0 19.9 101 9-113 90-207 (336)
138 PF12048 DUF3530: Protein of u 98.2 2E-05 4.4E-10 67.8 12.4 111 5-115 83-231 (310)
139 PF08840 BAAT_C: BAAT / Acyl-C 98.2 1.6E-05 3.6E-10 64.7 10.3 50 62-112 4-55 (213)
140 COG4814 Uncharacterized protei 98.1 1.9E-05 4.2E-10 64.3 8.5 102 10-111 46-174 (288)
141 KOG1553 Predicted alpha/beta h 98.1 1.5E-05 3.2E-10 67.7 7.9 99 9-111 243-343 (517)
142 PF00756 Esterase: Putative es 98.0 3.1E-06 6.7E-11 70.5 3.2 53 61-113 96-150 (251)
143 PRK10439 enterobactin/ferric e 98.0 3.7E-05 8E-10 68.8 10.1 103 9-112 209-322 (411)
144 PTZ00472 serine carboxypeptida 98.0 3.1E-05 6.6E-10 70.4 9.5 106 8-113 76-216 (462)
145 PF08386 Abhydrolase_4: TAP-li 98.0 3.1E-05 6.7E-10 55.5 7.2 60 206-265 34-93 (103)
146 PF06057 VirJ: Bacterial virul 98.0 2.8E-05 6.1E-10 61.2 7.0 96 11-112 4-106 (192)
147 KOG3724 Negative regulator of 97.9 2.4E-05 5.3E-10 72.8 6.8 101 7-111 87-218 (973)
148 PLN02606 palmitoyl-protein thi 97.9 6.4E-05 1.4E-09 63.5 8.4 98 9-112 26-131 (306)
149 KOG2281 Dipeptidyl aminopeptid 97.8 0.00052 1.1E-08 62.9 13.6 203 10-266 643-867 (867)
150 COG4782 Uncharacterized protei 97.8 0.00013 2.8E-09 62.7 9.2 101 8-111 115-232 (377)
151 PF05677 DUF818: Chlamydia CHL 97.8 9.9E-05 2.1E-09 63.0 8.0 85 8-99 136-236 (365)
152 PF05705 DUF829: Eukaryotic pr 97.8 0.0019 4.2E-08 53.5 15.6 57 206-262 178-239 (240)
153 KOG3847 Phospholipase A2 (plat 97.8 5.1E-05 1.1E-09 63.7 5.5 38 10-47 119-156 (399)
154 KOG2100 Dipeptidyl aminopeptid 97.7 0.0014 3.1E-08 63.1 15.7 196 10-264 527-745 (755)
155 KOG3253 Predicted alpha/beta h 97.7 0.00091 2E-08 61.0 13.2 60 206-265 304-373 (784)
156 PF04301 DUF452: Protein of un 97.7 0.00054 1.2E-08 55.4 10.3 79 9-113 11-90 (213)
157 KOG2369 Lecithin:cholesterol a 97.7 7.5E-05 1.6E-09 66.1 5.7 83 23-111 124-223 (473)
158 COG4099 Predicted peptidase [G 97.6 0.00049 1.1E-08 57.6 8.8 34 78-111 269-302 (387)
159 PLN02517 phosphatidylcholine-s 97.6 0.00016 3.4E-09 66.2 6.3 88 23-112 156-262 (642)
160 KOG2112 Lysophospholipase [Lip 97.5 0.00037 8.1E-09 55.4 7.3 102 10-111 4-126 (206)
161 cd00741 Lipase Lipase. Lipase 97.5 0.00015 3.2E-09 55.8 5.0 50 63-112 10-66 (153)
162 cd00312 Esterase_lipase Estera 97.5 0.0003 6.5E-09 64.6 6.9 104 8-113 94-213 (493)
163 COG3509 LpqC Poly(3-hydroxybut 97.5 0.0014 3E-08 55.0 10.0 101 9-113 61-179 (312)
164 COG3150 Predicted esterase [Ge 97.5 0.00065 1.4E-08 52.1 7.3 87 12-112 2-90 (191)
165 KOG4840 Predicted hydrolases o 97.4 0.00036 7.8E-09 56.0 6.0 99 10-112 37-143 (299)
166 PF02089 Palm_thioest: Palmito 97.4 0.00018 3.9E-09 60.3 4.4 102 10-112 6-115 (279)
167 KOG3967 Uncharacterized conser 97.4 0.0022 4.7E-08 51.3 9.8 103 9-112 101-226 (297)
168 PF01764 Lipase_3: Lipase (cla 97.3 0.0005 1.1E-08 51.8 5.2 36 62-98 49-84 (140)
169 PLN02633 palmitoyl protein thi 97.3 0.0016 3.4E-08 55.3 8.6 100 9-112 25-130 (314)
170 PF05577 Peptidase_S28: Serine 97.3 0.0014 3E-08 59.3 9.0 77 37-113 60-148 (434)
171 PF11339 DUF3141: Protein of u 97.3 0.011 2.4E-07 53.5 14.0 79 26-111 91-173 (581)
172 KOG3043 Predicted hydrolase re 97.2 0.0097 2.1E-07 48.0 11.7 43 206-248 164-211 (242)
173 PF06259 Abhydrolase_8: Alpha/ 97.1 0.00081 1.8E-08 52.9 5.0 50 62-111 89-142 (177)
174 COG0627 Predicted esterase [Ge 97.0 0.0022 4.8E-08 55.2 7.2 105 10-114 55-188 (316)
175 PF07082 DUF1350: Protein of u 96.9 0.0023 5E-08 52.5 6.1 97 11-110 19-122 (250)
176 PF03583 LIP: Secretory lipase 96.9 0.0063 1.4E-07 52.0 8.7 44 205-248 218-266 (290)
177 COG2819 Predicted hydrolase of 96.8 0.0027 5.8E-08 52.7 5.2 48 65-112 122-171 (264)
178 PF11187 DUF2974: Protein of u 96.8 0.0035 7.6E-08 51.4 5.9 45 65-111 73-121 (224)
179 KOG2541 Palmitoyl protein thio 96.8 0.011 2.4E-07 49.0 8.6 96 10-111 24-126 (296)
180 COG2936 Predicted acyl esteras 96.7 0.0032 7E-08 57.7 5.8 81 31-111 75-157 (563)
181 KOG2183 Prolylcarboxypeptidase 96.7 0.0051 1.1E-07 53.9 6.4 99 9-110 80-199 (492)
182 cd00519 Lipase_3 Lipase (class 96.7 0.0042 9.2E-08 51.0 5.8 23 76-98 126-148 (229)
183 PF10142 PhoPQ_related: PhoPQ- 96.5 0.083 1.8E-06 46.5 13.2 57 206-265 262-319 (367)
184 PLN02162 triacylglycerol lipas 96.5 0.0067 1.5E-07 54.3 6.5 35 62-97 263-297 (475)
185 KOG2551 Phospholipase/carboxyh 96.4 0.012 2.6E-07 47.4 6.8 59 205-264 162-222 (230)
186 KOG3101 Esterase D [General fu 96.4 0.0048 1E-07 49.3 4.3 108 5-112 40-175 (283)
187 PF10340 DUF2424: Protein of u 96.4 0.043 9.3E-07 48.2 10.6 103 8-115 121-237 (374)
188 PLN02571 triacylglycerol lipas 96.3 0.0054 1.2E-07 54.4 4.5 38 61-98 208-246 (413)
189 PLN02454 triacylglycerol lipas 96.3 0.0063 1.4E-07 53.9 4.7 20 79-98 229-248 (414)
190 COG2272 PnbA Carboxylesterase 96.2 0.0066 1.4E-07 54.5 4.8 105 7-113 92-217 (491)
191 PLN00413 triacylglycerol lipas 96.2 0.0068 1.5E-07 54.4 4.7 35 62-97 269-303 (479)
192 COG2382 Fes Enterochelin ester 96.0 0.012 2.5E-07 49.8 4.7 101 9-112 98-211 (299)
193 PLN02408 phospholipase A1 95.9 0.011 2.4E-07 51.7 4.5 35 64-98 185-220 (365)
194 PLN02310 triacylglycerol lipas 95.9 0.011 2.5E-07 52.2 4.4 36 63-98 191-229 (405)
195 PLN02934 triacylglycerol lipas 95.8 0.013 2.8E-07 53.1 4.5 34 62-96 306-339 (515)
196 PLN02324 triacylglycerol lipas 95.7 0.015 3.4E-07 51.5 4.5 34 64-97 200-234 (415)
197 PF00135 COesterase: Carboxyle 95.7 0.034 7.3E-07 51.4 7.0 105 9-113 125-245 (535)
198 PF11288 DUF3089: Protein of u 95.5 0.028 6.1E-07 45.3 5.1 40 60-99 77-116 (207)
199 PTZ00472 serine carboxypeptida 95.4 0.032 7E-07 50.9 5.9 59 206-264 364-457 (462)
200 PLN03037 lipase class 3 family 95.4 0.021 4.6E-07 51.8 4.4 35 63-97 300-337 (525)
201 PLN02802 triacylglycerol lipas 95.3 0.024 5.2E-07 51.4 4.5 36 63-98 314-350 (509)
202 PLN02753 triacylglycerol lipas 95.1 0.028 6.2E-07 51.1 4.5 34 64-97 294-331 (531)
203 PF01083 Cutinase: Cutinase; 95.1 0.043 9.2E-07 43.4 4.9 50 61-111 65-120 (179)
204 PF05277 DUF726: Protein of un 95.1 0.058 1.2E-06 47.0 6.0 49 66-114 207-261 (345)
205 PLN02847 triacylglycerol lipas 94.8 0.04 8.7E-07 50.9 4.6 34 77-110 250-285 (633)
206 PLN02761 lipase class 3 family 94.8 0.039 8.4E-07 50.2 4.5 19 79-97 295-313 (527)
207 PLN02719 triacylglycerol lipas 94.8 0.04 8.8E-07 50.0 4.4 19 79-97 299-317 (518)
208 KOG2182 Hydrolytic enzymes of 94.3 0.33 7.2E-06 43.9 8.8 102 8-112 85-206 (514)
209 COG3946 VirJ Type IV secretory 94.2 0.23 5E-06 43.8 7.4 68 26-99 277-347 (456)
210 KOG4372 Predicted alpha/beta h 94.1 0.049 1.1E-06 47.8 3.4 83 11-95 82-167 (405)
211 PF09949 DUF2183: Uncharacteri 94.1 0.89 1.9E-05 32.2 9.2 83 24-107 12-96 (100)
212 PF00450 Peptidase_S10: Serine 94.0 0.079 1.7E-06 47.4 4.6 105 8-113 39-181 (415)
213 PF11144 DUF2920: Protein of u 93.7 0.13 2.9E-06 45.4 5.3 36 78-113 184-219 (403)
214 KOG1202 Animal-type fatty acid 93.7 0.3 6.4E-06 48.8 7.8 96 7-112 2121-2218(2376)
215 KOG1551 Uncharacterized conser 93.6 0.55 1.2E-05 39.2 8.2 55 209-264 309-364 (371)
216 PF00450 Peptidase_S10: Serine 93.5 0.31 6.6E-06 43.6 7.5 59 206-264 330-414 (415)
217 COG1073 Hydrolases of the alph 93.4 0.26 5.7E-06 41.2 6.6 59 207-265 233-296 (299)
218 KOG4569 Predicted lipase [Lipi 93.2 0.12 2.6E-06 45.1 4.3 37 61-98 155-191 (336)
219 KOG2029 Uncharacterized conser 92.8 0.13 2.8E-06 47.4 3.9 35 58-92 504-540 (697)
220 PF04083 Abhydro_lipase: Parti 92.7 0.086 1.9E-06 33.9 2.0 19 7-25 41-59 (63)
221 PF08237 PE-PPE: PE-PPE domain 92.3 0.62 1.4E-05 38.2 7.1 73 36-110 2-86 (225)
222 PLN02213 sinapoylglucose-malat 91.5 0.68 1.5E-05 40.1 6.8 58 206-264 233-315 (319)
223 COG4947 Uncharacterized protei 91.4 0.65 1.4E-05 36.2 5.7 35 78-112 101-135 (227)
224 PLN02213 sinapoylglucose-malat 91.2 0.69 1.5E-05 40.1 6.5 76 38-113 3-96 (319)
225 KOG2237 Predicted serine prote 90.3 0.34 7.4E-06 45.1 3.9 103 9-112 470-583 (712)
226 PLN02209 serine carboxypeptida 90.2 0.79 1.7E-05 41.6 6.1 58 206-264 351-433 (437)
227 COG1505 Serine proteases of th 90.2 2.8 6E-05 39.1 9.5 81 28-109 443-531 (648)
228 COG2939 Carboxypeptidase C (ca 89.9 0.52 1.1E-05 42.8 4.6 104 9-113 101-236 (498)
229 COG1448 TyrB Aspartate/tyrosin 89.4 2.1 4.6E-05 37.6 7.8 87 8-111 170-263 (396)
230 PLN03016 sinapoylglucose-malat 89.2 0.75 1.6E-05 41.7 5.2 58 206-264 347-429 (433)
231 COG4553 DepA Poly-beta-hydroxy 88.8 14 0.0003 31.6 16.6 93 17-113 112-209 (415)
232 PLN02209 serine carboxypeptida 88.6 1.6 3.5E-05 39.6 6.9 105 9-113 68-212 (437)
233 KOG4540 Putative lipase essent 88.3 0.84 1.8E-05 38.5 4.5 35 66-100 264-298 (425)
234 COG5153 CVT17 Putative lipase 88.3 0.84 1.8E-05 38.5 4.5 35 66-100 264-298 (425)
235 PRK11613 folP dihydropteroate 88.2 0.95 2.1E-05 38.5 4.8 74 8-90 132-223 (282)
236 COG1770 PtrB Protease II [Amin 87.8 0.94 2E-05 42.5 4.9 104 9-113 448-562 (682)
237 PLN03016 sinapoylglucose-malat 87.7 2 4.4E-05 38.9 6.9 77 37-113 116-210 (433)
238 PF07519 Tannase: Tannase and 87.4 1.8 3.8E-05 39.8 6.5 83 28-112 52-149 (474)
239 KOG1516 Carboxylesterase and r 86.4 2.2 4.9E-05 39.7 6.8 49 64-112 180-231 (545)
240 PRK12467 peptide synthase; Pro 85.1 6.3 0.00014 45.9 10.5 101 10-114 3693-3796(3956)
241 cd01714 ETF_beta The electron 83.9 5.5 0.00012 32.1 7.1 69 31-109 71-145 (202)
242 PF06850 PHB_depo_C: PHB de-po 83.2 2.7 5.9E-05 33.5 4.8 62 204-265 132-201 (202)
243 KOG2551 Phospholipase/carboxyh 83.0 8.1 0.00018 31.5 7.5 103 9-114 5-148 (230)
244 cd03818 GT1_ExpC_like This fam 83.0 4.9 0.00011 35.7 7.2 37 12-50 2-38 (396)
245 PF03610 EIIA-man: PTS system 82.4 14 0.0003 26.6 8.1 74 11-96 2-76 (116)
246 KOG1282 Serine carboxypeptidas 81.0 5.1 0.00011 36.5 6.4 58 207-264 364-446 (454)
247 COG0412 Dienelactone hydrolase 77.6 8.1 0.00018 31.9 6.2 29 233-261 158-186 (236)
248 cd00006 PTS_IIA_man PTS_IIA, P 77.2 22 0.00048 25.8 7.9 73 11-95 3-75 (122)
249 PF00698 Acyl_transf_1: Acyl t 75.6 2.2 4.8E-05 36.8 2.5 30 67-97 74-103 (318)
250 PF06792 UPF0261: Uncharacteri 75.5 31 0.00068 30.9 9.5 99 12-110 3-127 (403)
251 PRK02399 hypothetical protein; 74.8 29 0.00064 31.1 9.1 98 13-110 6-129 (406)
252 KOG1200 Mitochondrial/plastidi 74.2 17 0.00036 29.3 6.7 33 11-45 15-47 (256)
253 smart00827 PKS_AT Acyl transfe 73.3 4.1 8.8E-05 34.6 3.5 30 67-97 72-101 (298)
254 TIGR03131 malonate_mdcH malona 73.0 4.3 9.4E-05 34.5 3.6 30 67-97 66-95 (295)
255 TIGR00128 fabD malonyl CoA-acy 72.2 4.5 9.7E-05 34.2 3.5 31 67-97 72-102 (290)
256 PF03583 LIP: Secretory lipase 71.7 12 0.00025 32.0 5.9 81 28-110 19-110 (290)
257 TIGR00521 coaBC_dfp phosphopan 70.7 35 0.00076 30.6 8.8 72 10-85 113-193 (390)
258 TIGR00632 vsr DNA mismatch end 69.0 10 0.00022 27.7 4.2 34 9-42 56-113 (117)
259 PRK05579 bifunctional phosphop 68.5 55 0.0012 29.4 9.6 73 9-85 116-196 (399)
260 KOG1282 Serine carboxypeptidas 67.4 10 0.00022 34.6 4.8 60 38-97 119-187 (454)
261 KOG1411 Aspartate aminotransfe 66.1 6.6 0.00014 34.3 3.1 94 2-111 190-290 (427)
262 cd00739 DHPS DHPS subgroup of 65.5 23 0.00051 29.6 6.4 74 9-91 120-211 (257)
263 PRK07313 phosphopantothenoylcy 65.4 21 0.00046 28.2 5.8 62 8-72 112-179 (182)
264 PF05576 Peptidase_S37: PS-10 64.3 7.8 0.00017 34.7 3.3 104 6-112 60-169 (448)
265 COG1073 Hydrolases of the alph 63.0 15 0.00033 30.3 5.0 88 10-100 50-154 (299)
266 PRK13398 3-deoxy-7-phosphohept 62.4 94 0.002 26.2 9.4 98 5-110 130-232 (266)
267 COG2939 Carboxypeptidase C (ca 61.8 8.8 0.00019 35.1 3.3 58 206-264 425-489 (498)
268 KOG2112 Lysophospholipase [Lip 60.5 10 0.00022 30.6 3.0 47 206-255 144-194 (206)
269 KOG2385 Uncharacterized conser 59.2 15 0.00032 33.9 4.2 39 76-114 445-488 (633)
270 COG1752 RssA Predicted esteras 59.1 13 0.00028 31.9 3.9 33 67-100 29-61 (306)
271 PF14253 AbiH: Bacteriophage a 58.9 9.7 0.00021 31.8 3.0 22 69-90 226-247 (270)
272 COG3571 Predicted hydrolase of 58.8 22 0.00047 27.7 4.5 41 206-247 142-182 (213)
273 cd07225 Pat_PNPLA6_PNPLA7 Pata 58.5 14 0.00031 31.8 4.0 34 65-99 31-64 (306)
274 COG4287 PqaA PhoPQ-activated p 58.2 11 0.00024 33.3 3.1 58 206-266 329-387 (507)
275 PF01012 ETF: Electron transfe 58.1 39 0.00084 25.8 6.1 62 28-99 50-113 (164)
276 COG3727 Vsr DNA G:T-mismatch r 57.6 19 0.00042 26.7 3.8 33 10-42 58-114 (150)
277 KOG1283 Serine carboxypeptidas 57.4 16 0.00034 31.7 3.8 76 38-113 73-166 (414)
278 TIGR01496 DHPS dihydropteroate 55.6 44 0.00096 28.0 6.3 69 9-86 118-204 (257)
279 cd07198 Patatin Patatin-like p 54.9 19 0.00041 27.9 3.8 33 67-100 16-48 (172)
280 PRK10279 hypothetical protein; 54.4 17 0.00037 31.2 3.8 33 67-100 23-55 (300)
281 COG2240 PdxK Pyridoxal/pyridox 54.1 1.1E+02 0.0023 26.1 8.3 83 29-117 21-117 (281)
282 TIGR02816 pfaB_fam PfaB family 53.8 15 0.00031 34.4 3.4 32 67-99 254-286 (538)
283 PF06057 VirJ: Bacterial virul 53.7 50 0.0011 26.4 5.9 50 206-264 139-190 (192)
284 PHA02114 hypothetical protein 53.0 20 0.00044 25.1 3.2 33 10-42 83-115 (127)
285 COG3933 Transcriptional antite 52.4 83 0.0018 28.6 7.6 71 10-93 110-180 (470)
286 cd07227 Pat_Fungal_NTE1 Fungal 52.4 21 0.00046 30.1 3.9 31 67-98 28-58 (269)
287 KOG1209 1-Acyl dihydroxyaceton 52.0 23 0.0005 29.0 3.8 36 8-44 5-40 (289)
288 PRK13397 3-deoxy-7-phosphohept 51.8 1E+02 0.0022 25.8 7.7 44 4-47 117-160 (250)
289 COG0218 Predicted GTPase [Gene 51.4 19 0.00041 28.9 3.2 15 39-53 72-86 (200)
290 PF07519 Tannase: Tannase and 50.7 32 0.0007 31.7 5.1 59 207-265 354-426 (474)
291 TIGR02883 spore_cwlD N-acetylm 49.7 43 0.00093 26.5 5.2 13 38-51 1-13 (189)
292 TIGR00824 EIIA-man PTS system, 49.3 98 0.0021 22.3 7.3 74 11-96 4-77 (116)
293 KOG2872 Uroporphyrinogen decar 48.9 72 0.0016 27.3 6.3 67 10-85 253-335 (359)
294 PF09087 Cyc-maltodext_N: Cycl 48.2 12 0.00026 25.8 1.5 16 4-19 8-24 (88)
295 PF12083 DUF3560: Domain of un 47.7 16 0.00035 27.0 2.2 22 64-86 29-50 (126)
296 cd07207 Pat_ExoU_VipD_like Exo 47.3 29 0.00063 27.2 3.9 33 66-99 16-48 (194)
297 PF02606 LpxK: Tetraacyldisacc 47.3 1.2E+02 0.0026 26.4 7.9 57 28-88 57-117 (326)
298 cd07210 Pat_hypo_W_succinogene 44.8 37 0.0008 27.7 4.2 32 67-99 18-49 (221)
299 cd07230 Pat_TGL4-5_like Triacy 44.7 16 0.00034 33.1 2.2 37 67-104 91-127 (421)
300 PRK13982 bifunctional SbtC-lik 44.6 1.1E+02 0.0024 28.2 7.5 61 9-72 180-247 (475)
301 TIGR01361 DAHP_synth_Bsub phos 44.5 1.5E+02 0.0033 24.8 7.9 76 5-88 128-206 (260)
302 cd07209 Pat_hypo_Ecoli_Z1214_l 44.0 34 0.00073 27.7 3.8 33 67-100 16-48 (215)
303 COG3887 Predicted signaling pr 44.0 41 0.00088 31.7 4.6 100 7-111 256-376 (655)
304 PRK13753 dihydropteroate synth 42.7 45 0.00099 28.3 4.4 53 33-92 161-216 (279)
305 PF05724 TPMT: Thiopurine S-me 42.3 28 0.00062 28.3 3.1 30 10-44 38-67 (218)
306 PF08255 Leader_Trp: Trp-opero 41.9 12 0.00025 16.2 0.4 12 10-21 2-13 (14)
307 cd06143 PAN2_exo DEDDh 3'-5' e 41.9 21 0.00046 28.0 2.2 13 78-90 101-113 (174)
308 cd00423 Pterin_binding Pterin 41.4 94 0.002 25.9 6.2 69 9-86 120-207 (258)
309 PRK13256 thiopurine S-methyltr 41.4 30 0.00064 28.5 3.1 29 11-44 45-73 (226)
310 TIGR01840 esterase_phb esteras 41.2 23 0.00051 28.3 2.5 24 208-231 170-193 (212)
311 KOG2521 Uncharacterized conser 40.3 1.6E+02 0.0034 26.1 7.4 60 206-265 225-289 (350)
312 COG4188 Predicted dienelactone 40.0 17 0.00036 32.1 1.5 51 205-255 250-303 (365)
313 PRK06193 hypothetical protein; 39.6 43 0.00092 27.1 3.7 51 58-111 135-186 (206)
314 cd01715 ETF_alpha The electron 39.5 1.5E+02 0.0032 22.7 6.7 77 9-100 29-107 (168)
315 PF08496 Peptidase_S49_N: Pept 39.3 53 0.0012 25.2 4.0 49 36-91 97-145 (155)
316 PF14987 NADHdh_A3: NADH dehyd 39.1 33 0.00071 23.0 2.4 28 64-91 2-29 (84)
317 COG4822 CbiK Cobalamin biosynt 39.1 54 0.0012 26.7 4.1 36 9-44 138-175 (265)
318 PF11144 DUF2920: Protein of u 38.9 83 0.0018 28.3 5.6 55 210-264 297-366 (403)
319 cd07228 Pat_NTE_like_bacteria 38.7 46 0.001 25.8 3.7 31 69-100 20-50 (175)
320 cd04951 GT1_WbdM_like This fam 38.0 2.2E+02 0.0049 24.0 8.4 83 12-97 3-98 (360)
321 cd07232 Pat_PLPL Patain-like p 37.9 19 0.00042 32.4 1.6 37 69-106 87-123 (407)
322 PRK04940 hypothetical protein; 37.6 1.5E+02 0.0033 23.4 6.4 51 209-264 127-178 (180)
323 COG1576 Uncharacterized conser 37.4 1.4E+02 0.003 23.0 5.8 55 28-94 60-114 (155)
324 COG1506 DAP2 Dipeptidyl aminop 36.9 1.1E+02 0.0024 29.3 6.6 60 9-73 551-615 (620)
325 cd07229 Pat_TGL3_like Triacylg 36.8 22 0.00049 31.7 1.8 37 69-106 103-139 (391)
326 PF00326 Peptidase_S9: Prolyl 36.8 77 0.0017 25.1 4.9 61 8-73 143-208 (213)
327 PRK03363 fixB putative electro 36.6 1.8E+02 0.0039 25.2 7.2 60 30-99 42-103 (313)
328 PRK14974 cell division protein 36.6 2.7E+02 0.0059 24.4 8.4 66 34-109 220-287 (336)
329 PRK14569 D-alanyl-alanine synt 36.4 64 0.0014 27.5 4.5 38 7-44 1-43 (296)
330 cd07212 Pat_PNPLA9 Patatin-lik 36.3 41 0.00089 29.1 3.3 21 80-100 34-54 (312)
331 PLN00022 electron transfer fla 36.3 1.9E+02 0.0041 25.6 7.4 62 28-99 75-140 (356)
332 KOG1465 Translation initiation 35.9 62 0.0013 27.8 4.1 92 11-112 164-273 (353)
333 PF04763 DUF562: Protein of un 35.4 98 0.0021 23.2 4.6 37 10-46 18-61 (146)
334 PRK14729 miaA tRNA delta(2)-is 35.4 1.6E+02 0.0035 25.3 6.7 78 7-86 1-101 (300)
335 COG1926 Predicted phosphoribos 35.3 1.1E+02 0.0023 25.0 5.2 49 60-108 7-56 (220)
336 PF03283 PAE: Pectinacetyleste 35.1 57 0.0012 28.9 4.1 37 74-110 152-192 (361)
337 PRK12595 bifunctional 3-deoxy- 35.0 2.3E+02 0.005 25.1 7.8 79 4-88 220-299 (360)
338 PF00448 SRP54: SRP54-type pro 34.6 1.1E+02 0.0024 24.3 5.4 72 28-109 75-148 (196)
339 PF06309 Torsin: Torsin; Inte 34.1 95 0.0021 23.0 4.4 55 10-74 53-116 (127)
340 PRK08762 molybdopterin biosynt 33.6 3.3E+02 0.007 24.2 8.7 33 76-111 134-167 (376)
341 PF11713 Peptidase_C80: Peptid 33.4 29 0.00062 26.8 1.7 48 43-90 60-116 (157)
342 KOG0736 Peroxisome assembly fa 33.4 1.3E+02 0.0027 29.8 6.1 52 59-111 789-842 (953)
343 COG0331 FabD (acyl-carrier-pro 33.3 62 0.0014 28.0 3.9 30 68-97 74-104 (310)
344 cd02908 Macro_Appr_pase_like M 33.3 1.5E+02 0.0032 22.7 5.8 63 24-88 93-155 (165)
345 PRK13255 thiopurine S-methyltr 33.3 56 0.0012 26.6 3.5 28 12-44 40-67 (218)
346 PF10081 Abhydrolase_9: Alpha/ 33.0 82 0.0018 26.9 4.4 50 62-111 91-145 (289)
347 PF03205 MobB: Molybdopterin g 32.8 70 0.0015 23.9 3.7 41 11-51 1-43 (140)
348 cd07208 Pat_hypo_Ecoli_yjju_li 32.4 80 0.0017 26.3 4.4 34 67-101 16-50 (266)
349 TIGR01425 SRP54_euk signal rec 32.2 2.5E+02 0.0054 25.6 7.7 69 31-109 177-247 (429)
350 PF13207 AAA_17: AAA domain; P 32.1 63 0.0014 22.9 3.3 37 12-50 1-40 (121)
351 COG2230 Cfa Cyclopropane fatty 31.6 1.1E+02 0.0024 26.1 5.1 43 66-109 60-104 (283)
352 cd06149 ISG20 DEDDh 3'-5' exon 31.6 36 0.00079 26.0 2.0 35 47-87 51-85 (157)
353 PRK00431 RNase III inhibitor; 31.6 2.5E+02 0.0053 21.8 7.3 63 24-88 100-162 (177)
354 PRK11916 electron transfer fla 31.4 3.5E+02 0.0076 23.5 8.8 60 29-99 41-102 (312)
355 PF06028 DUF915: Alpha/beta hy 31.4 1.1E+02 0.0023 25.7 4.9 57 206-263 184-252 (255)
356 cd07231 Pat_SDP1-like Sugar-De 30.7 35 0.00076 29.6 2.0 32 69-101 88-119 (323)
357 COG2062 SixA Phosphohistidine 30.6 1.1E+02 0.0024 23.7 4.5 33 78-110 102-139 (163)
358 PF06833 MdcE: Malonate decarb 30.5 85 0.0018 25.9 4.0 56 39-96 68-127 (234)
359 KOG2248 3'-5' exonuclease [Rep 30.1 46 0.00099 29.7 2.6 42 64-108 280-322 (380)
360 TIGR03840 TMPT_Se_Te thiopurin 30.1 62 0.0014 26.2 3.3 28 12-44 37-64 (213)
361 PRK00726 murG undecaprenyldiph 30.1 1.7E+02 0.0036 25.3 6.3 34 12-45 5-38 (357)
362 cd07205 Pat_PNPLA6_PNPLA7_NTE1 29.9 1.1E+02 0.0025 23.4 4.7 31 67-98 18-48 (175)
363 PLN02752 [acyl-carrier protein 29.8 38 0.00082 29.6 2.1 18 80-97 126-143 (343)
364 PRK06849 hypothetical protein; 29.2 2.5E+02 0.0054 24.9 7.3 72 12-87 6-86 (389)
365 PF00091 Tubulin: Tubulin/FtsZ 29.1 1.5E+02 0.0032 23.9 5.3 29 64-93 111-139 (216)
366 COG4850 Uncharacterized conser 28.6 1.9E+02 0.0041 25.3 5.9 45 66-111 267-313 (373)
367 TIGR00421 ubiX_pad polyprenyl 28.5 2.5E+02 0.0054 22.1 6.3 59 8-74 111-171 (181)
368 COG0337 AroB 3-dehydroquinate 28.5 3.9E+02 0.0085 23.7 8.0 71 11-91 35-105 (360)
369 TIGR00959 ffh signal recogniti 28.4 3.6E+02 0.0077 24.6 8.0 71 29-109 175-247 (428)
370 PF12740 Chlorophyllase2: Chlo 28.2 1E+02 0.0022 25.9 4.3 47 206-252 154-211 (259)
371 cd08769 DAP_dppA_2 Peptidase M 28.1 2.2E+02 0.0047 24.2 6.2 56 203-264 144-201 (270)
372 PF00809 Pterin_bind: Pterin b 27.7 1.2E+02 0.0026 24.5 4.5 69 9-86 116-204 (210)
373 PLN02496 probable phosphopanto 27.7 2.9E+02 0.0062 22.4 6.6 63 9-73 132-199 (209)
374 COG2830 Uncharacterized protei 27.7 98 0.0021 24.1 3.7 77 10-112 12-89 (214)
375 PRK10431 N-acetylmuramoyl-l-al 27.2 1.3E+02 0.0028 27.5 5.0 44 38-83 192-241 (445)
376 PRK00091 miaA tRNA delta(2)-is 27.1 2E+02 0.0044 24.8 6.1 73 9-83 3-99 (307)
377 cd07206 Pat_TGL3-4-5_SDP1 Tria 27.0 76 0.0017 27.3 3.4 28 76-103 95-122 (298)
378 PRK14046 malate--CoA ligase su 27.0 45 0.00098 29.9 2.1 32 77-108 118-149 (392)
379 PRK04435 hypothetical protein; 27.0 2.5E+02 0.0054 21.2 5.9 77 9-85 67-146 (147)
380 TIGR02260 benz_CoA_red_B benzo 26.9 2.8E+02 0.0062 25.0 7.2 38 9-47 266-303 (413)
381 PRK07206 hypothetical protein; 26.7 3.3E+02 0.0071 24.3 7.7 80 10-96 3-89 (416)
382 PF03721 UDPG_MGDP_dh_N: UDP-g 26.5 77 0.0017 25.0 3.1 30 13-45 3-32 (185)
383 PRK10319 N-acetylmuramoyl-l-al 26.2 51 0.0011 28.1 2.2 15 36-51 55-69 (287)
384 PF09664 DUF2399: Protein of u 25.7 75 0.0016 24.3 2.8 33 5-39 37-69 (152)
385 TIGR03607 patatin-related prot 25.7 1.3E+02 0.0028 29.5 5.0 21 77-97 65-85 (739)
386 PF06956 RtcR: Regulator of RN 25.6 1.8E+02 0.004 22.9 4.9 52 211-267 45-99 (183)
387 PRK15416 lipopolysaccharide co 25.4 75 0.0016 25.6 2.9 21 67-88 142-162 (201)
388 TIGR00682 lpxK tetraacyldisacc 25.3 78 0.0017 27.4 3.2 57 28-88 50-110 (311)
389 TIGR03586 PseI pseudaminic aci 24.8 3.9E+02 0.0085 23.3 7.4 79 4-93 129-209 (327)
390 PLN02748 tRNA dimethylallyltra 24.6 2.6E+02 0.0056 25.8 6.5 75 10-86 22-120 (468)
391 COG1703 ArgK Putative periplas 24.2 4.8E+02 0.01 22.7 8.8 41 9-50 50-94 (323)
392 cd07224 Pat_like Patatin-like 24.0 1.2E+02 0.0025 24.9 3.9 34 67-100 17-51 (233)
393 PTZ00445 p36-lilke protein; Pr 24.0 1.7E+02 0.0037 23.9 4.6 64 25-88 31-102 (219)
394 cd06144 REX4_like DEDDh 3'-5' 23.9 70 0.0015 24.2 2.4 36 47-88 51-86 (152)
395 PF14252 DUF4347: Domain of un 23.9 2.9E+02 0.0064 21.4 5.8 78 9-90 22-104 (165)
396 TIGR02113 coaC_strep phosphopa 23.9 2.5E+02 0.0054 22.0 5.6 36 9-44 112-150 (177)
397 KOG4388 Hormone-sensitive lipa 23.7 1.6E+02 0.0035 28.0 4.9 95 11-109 398-504 (880)
398 cd06145 REX1_like DEDDh 3'-5' 23.7 74 0.0016 24.0 2.5 37 47-88 48-85 (150)
399 COG0541 Ffh Signal recognition 23.5 4.3E+02 0.0092 24.2 7.4 70 31-110 177-248 (451)
400 PF04084 ORC2: Origin recognit 23.4 3.9E+02 0.0084 23.3 7.1 33 59-91 118-150 (326)
401 cd01820 PAF_acetylesterase_lik 23.3 1E+02 0.0022 24.6 3.4 39 50-88 4-43 (214)
402 PRK14581 hmsF outer membrane N 23.3 83 0.0018 30.4 3.2 78 8-87 47-144 (672)
403 KOG1502 Flavonol reductase/cin 23.3 97 0.0021 27.0 3.3 32 9-42 5-36 (327)
404 PRK03482 phosphoglycerate muta 23.0 2.2E+02 0.0047 22.7 5.3 34 58-93 120-156 (215)
405 PRK08220 2,3-dihydroxybenzoate 22.7 3E+02 0.0066 22.1 6.2 34 9-45 8-41 (252)
406 TIGR02813 omega_3_PfaA polyket 22.6 80 0.0017 35.7 3.3 29 67-96 664-692 (2582)
407 TIGR01827 gatC_rel Asp-tRNA(As 22.5 1.3E+02 0.0028 19.9 3.1 33 215-248 37-73 (73)
408 PF09370 TIM-br_sig_trns: TIM- 22.4 1.1E+02 0.0024 25.8 3.3 62 27-91 161-224 (268)
409 PF01715 IPPT: IPP transferase 22.2 73 0.0016 26.6 2.4 31 55-85 33-64 (253)
410 PF10686 DUF2493: Protein of u 22.2 1.8E+02 0.0038 19.0 3.7 14 10-23 32-46 (71)
411 TIGR03712 acc_sec_asp2 accesso 22.2 88 0.0019 28.8 3.0 37 65-101 343-381 (511)
412 TIGR02069 cyanophycinase cyano 21.7 2.8E+02 0.0061 23.1 5.7 42 4-45 23-66 (250)
413 PRK12828 short chain dehydroge 21.6 1.2E+02 0.0025 24.2 3.5 31 12-44 9-39 (239)
414 CHL00194 ycf39 Ycf39; Provisio 21.3 1.8E+02 0.0038 24.9 4.7 20 26-45 14-33 (317)
415 PF07521 RMMBL: RNA-metabolisi 21.3 68 0.0015 18.5 1.4 9 9-17 32-40 (43)
416 PRK09330 cell division protein 21.3 1.5E+02 0.0033 26.5 4.2 16 76-91 96-111 (384)
417 COG1255 Uncharacterized protei 21.2 96 0.0021 22.6 2.4 23 23-45 23-45 (129)
418 PRK09072 short chain dehydroge 20.9 1.4E+02 0.0031 24.4 3.9 32 11-44 6-37 (263)
419 PRK01906 tetraacyldisaccharide 20.8 92 0.002 27.3 2.8 77 10-90 56-139 (338)
420 PF01075 Glyco_transf_9: Glyco 20.6 1.4E+02 0.0031 24.2 3.8 35 8-42 104-143 (247)
421 KOG2521 Uncharacterized conser 20.5 2E+02 0.0044 25.4 4.7 85 9-93 38-124 (350)
422 PF01972 SDH_sah: Serine dehyd 20.3 2.7E+02 0.0059 23.7 5.3 72 34-106 46-124 (285)
423 PLN00142 sucrose synthase 20.3 1.6E+02 0.0034 29.3 4.4 40 60-99 390-430 (815)
424 PF00484 Pro_CA: Carbonic anhy 20.2 1.5E+02 0.0032 22.3 3.6 28 64-92 42-69 (153)
425 PRK00865 glutamate racemase; P 20.1 3E+02 0.0066 22.9 5.7 41 223-263 19-60 (261)
No 1
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.5e-40 Score=278.84 Aligned_cols=251 Identities=35% Similarity=0.574 Sum_probs=168.2
Q ss_pred CccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeC
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHS 86 (267)
|+.-+||||||++++.++|+.+++.|++.+|+|+++|+||||.|+.+....++++++++++.+++++++..++++|||||
T Consensus 1 ~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhS 80 (255)
T PLN02965 1 MPEIHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHS 80 (255)
T ss_pred CCceEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecC
Confidence 34557999999999999999999999777899999999999999865444579999999999999999433599999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHH
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (267)
|||.+++.+|.++|++|+++|++++..+..+............. ....|. ..+.. .. ...........++....
T Consensus 81 mGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~-~~-~~~~~~~~~~~~~~~~~ 154 (255)
T PLN02965 81 IGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEG---TEKIWD-YTFGE-GP-DKPPTGIMMKPEFVRHY 154 (255)
T ss_pred cchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhc---ccccee-eeecc-CC-CCCcchhhcCHHHHHHH
Confidence 99999999999999999999999975432222111111110000 000110 00000 00 00000001111222233
Q ss_pred HhcCCChHHHHHHHHhcCCCccc-cccccccccCC-ccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCC
Q 024469 167 IYQLCPPEDLELAKMLVRPGSMF-IDNLSKESKFS-DEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGD 244 (267)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~g 244 (267)
+++....+..........+.... ...+. .+. .....++|+++|+|++|.++|++.++.+++.+|+++++++++||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~G 231 (255)
T PLN02965 155 YYNQSPLEDYTLSSKLLRPAPVRAFQDLD---KLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSD 231 (255)
T ss_pred HhcCCCHHHHHHHHHhcCCCCCcchhhhh---hccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCC
Confidence 33333222222222222221110 00110 111 11234899999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHhh
Q 024469 245 HMAMLSDPQKLCDCLSQISLKY 266 (267)
Q Consensus 245 H~~~~e~p~~~~~~l~~f~~~~ 266 (267)
|++++|+|++|++.|.+|+++.
T Consensus 232 H~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 232 HSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred CchhhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999863
No 2
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=1.9e-37 Score=262.39 Aligned_cols=249 Identities=35% Similarity=0.624 Sum_probs=173.0
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
++++|||+||+++++++|..+.+.|++.||+|+++|+||||.|.......++++++++++.++++++...++++||||||
T Consensus 17 ~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~ 96 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHSA 96 (273)
T ss_pred CCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 35789999999999999999999998779999999999999886443334799999999999999884347999999999
Q ss_pred hhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccc---cccccCCCCCCccceeechHHHH
Q 024469 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDT---QFSQCDASNPSHISMLFGREFLT 164 (267)
Q Consensus 88 GG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 164 (267)
||+++..++.++|++|+++|++++..+..+.... ....... .....+... .... .. ..........+++..
T Consensus 97 GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~---~~~~~~~-~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 170 (273)
T PLN02211 97 GGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTD---EDMKDGV-PDLSEFGDVYELGFGL-GP-DQPPTSAIIKKEFRR 170 (273)
T ss_pred hHHHHHHHHHhChhheeEEEEeccccCCCCCCHH---HHHhccc-cchhhhccceeeeecc-CC-CCCCceeeeCHHHHH
Confidence 9999999999999999999999876554333211 1111100 000000000 0000 00 000001122344445
Q ss_pred HHHhcCCChHHHHHHHHhcCCCccccccccccccC-CccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCC
Q 024469 165 IKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKF-SDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGG 243 (267)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~ 243 (267)
..+++..+++...+.....++.... .+...... ....+.++|++||+|++|+++|++.++.+++.+|+++++.++ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~ 247 (273)
T PLN02211 171 KILYQMSPQEDSTLAAMLLRPGPIL--ALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-S 247 (273)
T ss_pred HHHhcCCCHHHHHHHHHhcCCcCcc--ccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-C
Confidence 5566666555444333333332211 01111000 112344789999999999999999999999999999999997 9
Q ss_pred CCCCCCCCcHHHHHHHHHHHHh
Q 024469 244 DHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 244 gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
||++++|+|++|++.|.++++.
T Consensus 248 gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 248 DHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred CCCccccCHHHHHHHHHHHHHH
Confidence 9999999999999999999876
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.5e-36 Score=256.72 Aligned_cols=250 Identities=19% Similarity=0.211 Sum_probs=159.1
Q ss_pred cCCccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCC------CcccChHHhhHHHHHHHHcCCCCC
Q 024469 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI------EDVHTFHAYSEPLMEVLASLPAEE 78 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~------~~~~~~~~~~~~l~~~i~~l~~~~ 78 (267)
.|.++++|||+||++.++..|+.+++.|+.. |+|+++|+||||.|+.+. ...|+++++++++.++++++ +.+
T Consensus 25 ~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-~~~ 102 (294)
T PLN02824 25 AGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-VGD 102 (294)
T ss_pred cCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-cCC
Confidence 3544689999999999999999999999765 899999999999998642 13589999999999999999 568
Q ss_pred cEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCC-C-Ch---hhhHHHHHhhcCCCCcccccccccccCCCCCCc
Q 024469 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTT-H-RP---SFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSH 153 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
+++||||||||.+++.+|.++|++|.++|++++...... . .+ ......+..... . ..+....+.. . .. +
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~--~-~~-~ 176 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLR-E-TAVGKAFFKS--V-AT-P 176 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHh-c-hhHHHHHHHh--h-cC-H
Confidence 999999999999999999999999999999997532110 0 00 001111111000 0 0000000000 0 00 0
Q ss_pred cceeechHHHHHHHhcC--CChHHHHHHHH-hcCCC--ccccccc--cccccC-CccCCCCccEEEEEeCCCccCChHHH
Q 024469 154 ISMLFGREFLTIKIYQL--CPPEDLELAKM-LVRPG--SMFIDNL--SKESKF-SDEGYGSVKRVYLVCEEDIGLPKQFQ 225 (267)
Q Consensus 154 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~--~~~~~~~--~~~~~~-~~~~~~~iP~l~i~g~~D~~~~~~~~ 225 (267)
... ..++...+... ..++..+.... ..... ..+...+ ...... ......++|+++|+|++|.++|.+.+
T Consensus 177 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 253 (294)
T PLN02824 177 --ETV-KNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELG 253 (294)
T ss_pred --HHH-HHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHH
Confidence 000 00000000000 00000000000 00000 0000000 000000 00112378999999999999999999
Q ss_pred HHHHHcCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 226 HWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 226 ~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
+.+.+..+++++++++++||++++|+|++|++.|.+|+++
T Consensus 254 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 254 RAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred HHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9888888888999999999999999999999999999975
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.9e-35 Score=252.70 Aligned_cols=247 Identities=15% Similarity=0.099 Sum_probs=157.6
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC-cccChHHhhHHHHHHHHcCCCCCcEEEEeeC
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~vilvGHS 86 (267)
.+++||||||++.++..|+.+++.|.+.||+|+++|+||||.|+.+.. ..++++++++++.++++++ +.++++|||||
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l-~~~~v~lvGhS 123 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL-DLTDVTLVCQD 123 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-CCCCEEEEEEC
Confidence 368999999999999999999999976789999999999999976532 3479999999999999999 56799999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcc-cccccccccCCCCCCccceeechHHHHH
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDS-WLDTQFSQCDASNPSHISMLFGREFLTI 165 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
|||.++..+|.++|++|.+||++++..+..............+.. ..... ........ . . ......+....
T Consensus 124 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~--~----~~~~~~~~~~~ 195 (302)
T PRK00870 124 WGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFS-QYSPVLPVGRLVNG-G--T----VRDLSDAVRAA 195 (302)
T ss_pred hHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhccc-ccCchhhHHHHhhc-c--c----cccCCHHHHHH
Confidence 999999999999999999999999743321111000011111000 00000 00000000 0 0 00011111111
Q ss_pred HHhcCCChHHH-H---HHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCe---EE
Q 024469 166 KIYQLCPPEDL-E---LAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNE---VM 238 (267)
Q Consensus 166 ~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~---~~ 238 (267)
+......+.. . ....+................+......++|+++|+|++|.++|... +.+.+.+|+++ ++
T Consensus 196 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~ 273 (302)
T PRK00870 196 -YDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHP 273 (302)
T ss_pred -hhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhccccccccee
Confidence 1110000000 0 00000100000000000000001112237899999999999999866 78888888776 88
Q ss_pred EecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 239 EIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 239 ~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
+++++||++++|+|++|++.|.+|+++
T Consensus 274 ~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 274 TIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred eecCCCccchhhChHHHHHHHHHHHhc
Confidence 999999999999999999999999875
No 5
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=240.55 Aligned_cols=252 Identities=17% Similarity=0.198 Sum_probs=165.1
Q ss_pred CccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC-cccChHHhhHHHHHHHHcCCCCCcEEEEee
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~vilvGH 85 (267)
++||.|+|+||++...++|+.+.+.|+++||||+|+|+||+|.|+.+.. ..||+...+.++.+++++| +.+++++|||
T Consensus 42 ~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L-g~~k~~lvgH 120 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL-GLKKAFLVGH 120 (322)
T ss_pred CCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh-ccceeEEEec
Confidence 3579999999999999999999999999999999999999999998765 6799999999999999999 5799999999
Q ss_pred ChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHH
Q 024469 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTI 165 (267)
Q Consensus 86 SmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
+||+++++.+|..+|++|+++|+++...+.+...+.... ... ....+....++..+..+. . .+....+....
T Consensus 121 DwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~----~~~--f~~~~y~~~fQ~~~~~E~-~-~s~~~~~~~~~ 192 (322)
T KOG4178|consen 121 DWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSS----KAI--FGKSYYICLFQEPGKPET-E-LSKDDTEMLVK 192 (322)
T ss_pred cchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhh----ccc--cCccceeEeccccCcchh-h-hccchhHHhHH
Confidence 999999999999999999999999864432111111100 000 011111111110000000 0 00000000000
Q ss_pred HHhc------------------CCChHHHHHHHHhcCCCc--ccccc---ccccc-cCCc-cCCCCccEEEEEeCCCccC
Q 024469 166 KIYQ------------------LCPPEDLELAKMLVRPGS--MFIDN---LSKES-KFSD-EGYGSVKRVYLVCEEDIGL 220 (267)
Q Consensus 166 ~~~~------------------~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~-~~~~-~~~~~iP~l~i~g~~D~~~ 220 (267)
.+.. ....++.+....-..... ..++. +.... .... .....+|+++|||..|.+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~ 272 (322)
T KOG4178|consen 193 TFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVL 272 (322)
T ss_pred hhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccc
Confidence 0000 001222232222111111 01111 11111 0111 1223689999999999988
Q ss_pred ChH-HHHHHHHcCCCC-eEEEecCCCCCCCCCCcHHHHHHHHHHHHhhC
Q 024469 221 PKQ-FQHWMIQNYPVN-EVMEIKGGDHMAMLSDPQKLCDCLSQISLKYA 267 (267)
Q Consensus 221 ~~~-~~~~~~~~~p~~-~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~~~ 267 (267)
+.. ..+.+.+..|.. +.++++++||+++.|+|++|+++|.+|+++|.
T Consensus 273 ~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 273 PYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred cchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 766 455667778877 67889999999999999999999999998863
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.2e-34 Score=245.69 Aligned_cols=239 Identities=12% Similarity=0.093 Sum_probs=155.9
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
++||||+||++.++..|+.+++.|.+ +|+|+++|+||||.|+.+. ..++++++++++.++++++ +.++++|||||||
T Consensus 25 ~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~~~i~~l-~~~~~~LvG~S~G 101 (276)
T TIGR02240 25 LTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAARMLDYL-DYGQVNAIGVSWG 101 (276)
T ss_pred CCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCC-CcCcHHHHHHHHHHHHHHh-CcCceEEEEECHH
Confidence 47999999999999999999999965 5999999999999998653 3579999999999999999 5689999999999
Q ss_pred hHHHHHHhhhCCCccceEEEEeccCCCCCCChh-hhHHHHHhhcCCCCcccccccc--cccCCCCCCccceeechHHHHH
Q 024469 89 GVTLALAADKFPHKISVAVFVTAFMPDTTHRPS-FVLEQYSEKMGKEDDSWLDTQF--SQCDASNPSHISMLFGREFLTI 165 (267)
Q Consensus 89 G~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
|.+++.+|.++|++|++||++++.......... ...... .. ...+..... ......... .....++....
T Consensus 102 G~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 174 (276)
T TIGR02240 102 GALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMM-AS----PRRYIQPSHGIHIAPDIYGG--AFRRDPELAMA 174 (276)
T ss_pred HHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHh-cC----chhhhccccccchhhhhccc--eeeccchhhhh
Confidence 999999999999999999999975421111100 011000 00 000000000 000000000 00000010000
Q ss_pred HHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCC
Q 024469 166 KIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 245 (267)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH 245 (267)
.................. ..+ ...........++|+++|+|++|+++|++.++++.+.+|++++++++ +||
T Consensus 175 ~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~-~gH 245 (276)
T TIGR02240 175 HASKVRSGGKLGYYWQLF-------AGL-GWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIID-DGH 245 (276)
T ss_pred hhhhcccCCCchHHHHHH-------HHc-CCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEc-CCC
Confidence 000000000000000000 000 00000011223789999999999999999999999999999999998 599
Q ss_pred CCCCCCcHHHHHHHHHHHHhh
Q 024469 246 MAMLSDPQKLCDCLSQISLKY 266 (267)
Q Consensus 246 ~~~~e~p~~~~~~l~~f~~~~ 266 (267)
++++|+|++|++.|.+|++++
T Consensus 246 ~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 246 LFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred chhhccHHHHHHHHHHHHHHh
Confidence 999999999999999999763
No 7
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.2e-34 Score=251.06 Aligned_cols=250 Identities=16% Similarity=0.106 Sum_probs=152.7
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
++|||||||++.+...|+.+++.|++ +|+|+++|+||||.|+.+.+..|+++++++++.++++++ ..++++|||||||
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l-~~~~~~lvGhS~G 165 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV-VQKPTVLIGNSVG 165 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh-cCCCeEEEEECHH
Confidence 48999999999999999999999975 699999999999999876444689999999999999999 5689999999999
Q ss_pred hHHHHHHhh-hCCCccceEEEEeccCCCCCCCh-hhhHHHHHhhcCCCCcccccccccccCCCCCCccce-eechHHHHH
Q 024469 89 GVTLALAAD-KFPHKISVAVFVTAFMPDTTHRP-SFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISM-LFGREFLTI 165 (267)
Q Consensus 89 G~i~~~~a~-~~p~~v~~lvli~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 165 (267)
|.+++.+|. .+|++|.+||++++......... ......... +...+......... ....... ......+..
T Consensus 166 g~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 239 (360)
T PLN02679 166 SLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLL----PLLWLIDFLLKQRG--IASALFNRVKQRDNLKN 239 (360)
T ss_pred HHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhc----chHHHHHHHhhchh--hHHHHHHHhcCHHHHHH
Confidence 999888776 57999999999997432110000 000000000 00000000000000 0000000 000000100
Q ss_pred H---HhcCC---ChHHHHHHHHhcCCCcc---ccccccccc--c-CCccCCCCccEEEEEeCCCccCChHH-----HHHH
Q 024469 166 K---IYQLC---PPEDLELAKMLVRPGSM---FIDNLSKES--K-FSDEGYGSVKRVYLVCEEDIGLPKQF-----QHWM 228 (267)
Q Consensus 166 ~---~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~--~-~~~~~~~~iP~l~i~g~~D~~~~~~~-----~~~~ 228 (267)
. .+... .++..+........... +...+.... . .......++|+++|+|++|.++|++. .+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l 319 (360)
T PLN02679 240 ILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSL 319 (360)
T ss_pred HHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhh
Confidence 0 00000 01111100000000000 000000000 0 00112237899999999999998863 2346
Q ss_pred HHcCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHHhh
Q 024469 229 IQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLKY 266 (267)
Q Consensus 229 ~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~~ 266 (267)
.+.+|++++++|++|||++++|+|++|++.|.+|+.+.
T Consensus 320 ~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 320 PSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred hccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 66789999999999999999999999999999999863
No 8
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.4e-34 Score=244.54 Aligned_cols=252 Identities=16% Similarity=0.116 Sum_probs=155.1
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
+++|||||||++.+...|+.+++.|.+. |+|+++|+||||.|+.+. ..++++++++++.++++++ +.++++||||||
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~-~~~~~~~~a~dl~~ll~~l-~~~~~~lvGhS~ 102 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD-IDYTFADHARYLDAWFDAL-GLDDVVLVGHDW 102 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-CCCCeEEEEECH
Confidence 4789999999999999999999999876 699999999999998764 3589999999999999999 558999999999
Q ss_pred hhHHHHHHhhhCCCccceEEEEeccCCCC-CCChhhhHHHHHhhcCCCC-cc--ccc-cc-ccccCCCCCCccceeechH
Q 024469 88 GGVTLALAADKFPHKISVAVFVTAFMPDT-THRPSFVLEQYSEKMGKED-DS--WLD-TQ-FSQCDASNPSHISMLFGRE 161 (267)
Q Consensus 88 GG~i~~~~a~~~p~~v~~lvli~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~--~~~-~~-~~~~~~~~~~~~~~~~~~~ 161 (267)
||.+++.+|.++|++|++||++++..... .................+. .. ... .. ..... .... ...+.++
T Consensus 103 Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~ 179 (295)
T PRK03592 103 GSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVL--PGSI-LRPLSDE 179 (295)
T ss_pred HHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcc--cCcc-cccCCHH
Confidence 99999999999999999999999743211 1100000001111010000 00 000 00 00000 0000 0001111
Q ss_pred HHHHHHhcCCChHHHHHHHHhcCCCc--ccccccccc-ccCC-ccCCCCccEEEEEeCCCccCChHHHHH-HHHcCCCCe
Q 024469 162 FLTIKIYQLCPPEDLELAKMLVRPGS--MFIDNLSKE-SKFS-DEGYGSVKRVYLVCEEDIGLPKQFQHW-MIQNYPVNE 236 (267)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~-~~~~~~iP~l~i~g~~D~~~~~~~~~~-~~~~~p~~~ 236 (267)
.+....................+... ......... ..+. .....++|+++|+|++|.++++..+.. +.+..++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~ 259 (295)
T PRK03592 180 EMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLE 259 (295)
T ss_pred HHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcc
Confidence 11111100001111000000000000 000000000 0000 012237899999999999995555544 445578899
Q ss_pred EEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 237 VMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 237 ~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
++++++|||++++|+|++|++.|.+|+++
T Consensus 260 ~~~i~~~gH~~~~e~p~~v~~~i~~fl~~ 288 (295)
T PRK03592 260 ITVFGAGLHFAQEDSPEEIGAAIAAWLRR 288 (295)
T ss_pred eeeccCcchhhhhcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999976
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.5e-34 Score=243.53 Aligned_cols=248 Identities=10% Similarity=0.115 Sum_probs=154.2
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
.+++||||||++.++..|+.+.+.|.. +|+|+++|+||||.|+.+.+..++++++++++.++++++ +.++++||||||
T Consensus 33 ~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvG~S~ 110 (286)
T PRK03204 33 TGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL-GLDRYLSMGQDW 110 (286)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh-CCCCEEEEEECc
Confidence 368999999999999999999999965 599999999999999876544579999999999999998 558999999999
Q ss_pred hhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHHH
Q 024469 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKI 167 (267)
Q Consensus 88 GG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (267)
||.++..+|..+|++|+++|++++...............+.... .....+....+.......... .......... ..
T Consensus 111 Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~ 187 (286)
T PRK03204 111 GGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSP-PVQYAILRRNFFVERLIPAGT-EHRPSSAVMA-HY 187 (286)
T ss_pred cHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccc-cchhhhhhhhHHHHHhccccc-cCCCCHHHHH-Hh
Confidence 99999999999999999999988643111000000111110000 000000000000000000000 0000011111 11
Q ss_pred hcCC-ChHHHHHHHHh---cCCCccccccccccccCCccCCCCccEEEEEeCCCccCChH-HHHHHHHcCCCCeEEEecC
Q 024469 168 YQLC-PPEDLELAKML---VRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQ-FQHWMIQNYPVNEVMEIKG 242 (267)
Q Consensus 168 ~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~-~~~~~~~~~p~~~~~~i~~ 242 (267)
.... ..........+ ..........+.. .+. ....++|+++|+|++|.++++. ..+.+.+.+|+++++++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~ 264 (286)
T PRK03204 188 RAVQPNAAARRGVAEMPKQILAARPLLARLAR--EVP-ATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPN 264 (286)
T ss_pred cCCCCCHHHHHHHHHHHHhcchhhHHHHHhhh--hhh-hhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCC
Confidence 1110 01100000000 0000000000000 000 0112799999999999988655 5678889999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHH
Q 024469 243 GDHMAMLSDPQKLCDCLSQIS 263 (267)
Q Consensus 243 ~gH~~~~e~p~~~~~~l~~f~ 263 (267)
+||++++|+|++|++.|.+|+
T Consensus 265 aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 265 AKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CcccccccCHHHHHHHHHHhc
Confidence 999999999999999999986
No 10
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=3.9e-34 Score=239.87 Aligned_cols=236 Identities=19% Similarity=0.245 Sum_probs=148.3
Q ss_pred cCCccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEe
Q 024469 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvG 84 (267)
.|.+.+|||||||++.+++.|+.+++.|.+ .|+|+++|+||||.|+.. ..++++++++++.+ + ..++++|||
T Consensus 9 ~G~g~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~l~~----~-~~~~~~lvG 80 (256)
T PRK10349 9 KGQGNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGF--GALSLADMAEAVLQ----Q-APDKAIWLG 80 (256)
T ss_pred cCCCCCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCC--CCCCHHHHHHHHHh----c-CCCCeEEEE
Confidence 465345799999999999999999999976 499999999999999754 34688888887654 3 347999999
Q ss_pred eChhhHHHHHHhhhCCCccceEEEEeccCCCCCCC--hh---hhHHHHHhhcCCCCcccccccccccCCCCCCccceeec
Q 024469 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHR--PS---FVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG 159 (267)
Q Consensus 85 HSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
|||||.++..+|.++|++|.+||++++........ +. .....+...............+.... .... ...
T Consensus 81 hS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~ 155 (256)
T PRK10349 81 WSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT--MGTE---TAR 155 (256)
T ss_pred ECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH--ccCc---hHH
Confidence 99999999999999999999999998742211100 00 00001100000000000000000000 0000 000
Q ss_pred hHH--HHHHHhcCC-C-hHHHHHHHHhcCCCccccccccccccC-CccCCCCccEEEEEeCCCccCChHHHHHHHHcCCC
Q 024469 160 REF--LTIKIYQLC-P-PEDLELAKMLVRPGSMFIDNLSKESKF-SDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPV 234 (267)
Q Consensus 160 ~~~--~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~ 234 (267)
... +........ + ........... .. ..+ ......++|+++|+|++|.++|.+.++.+.+.+|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~ 224 (256)
T PRK10349 156 QDARALKKTVLALPMPEVDVLNGGLEIL----------KT-VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH 224 (256)
T ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHH----------Hh-CccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCC
Confidence 000 000000000 0 00000000000 00 000 01122378999999999999999999999999999
Q ss_pred CeEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 235 NEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 235 ~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
++++++++|||++++|+|++|++.|.+|-+
T Consensus 225 ~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 225 SESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999999999999999864
No 11
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=3.6e-32 Score=227.44 Aligned_cols=234 Identities=17% Similarity=0.221 Sum_probs=156.0
Q ss_pred CccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeC
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHS 86 (267)
++++|||||||++.+...|..+...|++ +|+|+++|+||||.|+... .++++++++++.++++++ ..++++|||||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~~~~l~~l-~~~~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP--VMNYPAMAQDLLDTLDAL-QIEKATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC--CCCHHHHHHHHHHHHHHc-CCCceEEEEEC
Confidence 3468999999999999999999999965 6999999999999998643 479999999999999999 55789999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHH
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (267)
|||.+++.+|.++|++|+++|++++... ..... . ........ .. ...... . ..+.....
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~-~~~~~-~-~~~~~~~~--------~~-~~~~~~-~--------~~~~~~~~ 148 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPV-DYHVR-R-HDEIFAAI--------NA-VSEAGA-T--------TRQQAAAI 148 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCC-Cccch-h-hHHHHHHH--------HH-hhhccc-c--------cHHHHHHH
Confidence 9999999999999999999999985321 11110 0 00000000 00 000000 0 00000000
Q ss_pred Hhc-CCChHHHHHHHHhcCCCcc--c----cccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEE
Q 024469 167 IYQ-LCPPEDLELAKMLVRPGSM--F----IDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVME 239 (267)
Q Consensus 167 ~~~-~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~ 239 (267)
+.. ..............+.... . .........+......++|+++|+|++|..++++.++.+.+.+|++++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 228 (255)
T PRK10673 149 MRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHV 228 (255)
T ss_pred HHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEE
Confidence 000 0000000000000000000 0 00000000011111236899999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 240 IKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 240 i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
++++||++++|+|+++++.|.+|+.+
T Consensus 229 ~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 229 IAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred eCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 99999999999999999999999864
No 12
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=1.4e-32 Score=233.33 Aligned_cols=244 Identities=16% Similarity=0.149 Sum_probs=149.8
Q ss_pred ccceEEEecCCCCChhchHH---HHHHHhcCCCeEEEeCCCCCCCCCCCCCc-ccChHHhhHHHHHHHHcCCCCCcEEEE
Q 024469 8 EEKHFVLVHGVNHGAWCWYK---LKARLVAGGHRVTAVDLAASGINMKRIED-VHTFHAYSEPLMEVLASLPAEEKVILV 83 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~---~~~~L~~~g~~via~Dl~G~G~S~~~~~~-~~~~~~~~~~l~~~i~~l~~~~~vilv 83 (267)
++++||||||++.+...|.. .+..|.+.||+|+++|+||||.|+....+ .+++ .+++++.++++.+ ..++++|+
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~-~~~~~l~~~l~~l-~~~~~~lv 106 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGL-VNARAVKGLMDAL-DIEKAHLV 106 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccc-hhHHHHHHHHHHc-CCCCeeEE
Confidence 47899999999988877753 34456566899999999999999864322 2232 5789999999999 56899999
Q ss_pred eeChhhHHHHHHhhhCCCccceEEEEeccCCCCC-C-C-hhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeech
Q 024469 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTT-H-R-PSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR 160 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
||||||.+++.+|.++|++|+++|++++...... . . +......+.+....+...-....+.... .+. .....
T Consensus 107 G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~ 181 (282)
T TIGR03343 107 GNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFL--FDQ---SLITE 181 (282)
T ss_pred EECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCc--cCc---ccCcH
Confidence 9999999999999999999999999996421100 0 0 0000111111000000000000000000 000 00011
Q ss_pred HHHHHHHhc--CCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEE
Q 024469 161 EFLTIKIYQ--LCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVM 238 (267)
Q Consensus 161 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~ 238 (267)
.. .+.... ...+..................++. ......++|+++|+|++|.+++++.++.+.+.+|+++++
T Consensus 182 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~ 255 (282)
T TIGR03343 182 EL-LQGRWENIQRQPEHLKNFLISSQKAPLSTWDVT-----ARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLH 255 (282)
T ss_pred HH-HHhHHHHhhcCHHHHHHHHHhccccccccchHH-----HHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEE
Confidence 11 110000 0001100000000000000000000 011223789999999999999999999999999999999
Q ss_pred EecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 239 EIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 239 ~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
+++++||++++|+|++|++.|.+|++
T Consensus 256 ~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 256 VFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred EeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 99999999999999999999999985
No 13
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=4.1e-32 Score=238.60 Aligned_cols=247 Identities=15% Similarity=0.135 Sum_probs=156.8
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC---cccChHHhhHHHHHHHHcCCCCCcEEEEe
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE---DVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~---~~~~~~~~~~~l~~~i~~l~~~~~vilvG 84 (267)
++++||||||++.+.+.|+.+++.|++ +|+|+++|+||||.|+.+.. ..|++++++++|.++++++ ..++++|||
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-~~~~~~LvG 203 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-KSDKVSLVV 203 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh-CCCCceEEE
Confidence 368999999999999999999999975 69999999999999987542 2589999999999999999 558999999
Q ss_pred eChhhHHHHHHhhhCCCccceEEEEeccCCCCCC-ChhhhHHHHHhhcCCCCcccccc-ccccc-CCCCCCccceeechH
Q 024469 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTH-RPSFVLEQYSEKMGKEDDSWLDT-QFSQC-DASNPSHISMLFGRE 161 (267)
Q Consensus 85 HSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 161 (267)
|||||++++.+|.++|++|.++|++++....... .+.. ...+.... ...+... .+... ....... ......+
T Consensus 204 ~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~-l~~~~~~l---~~~~~~~~~~~~~~~~~~~~~-~~~~~~e 278 (383)
T PLN03084 204 QGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPST-LSEFSNFL---LGEIFSQDPLRASDKALTSCG-PYAMKED 278 (383)
T ss_pred ECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHH-HHHHHHHH---hhhhhhcchHHHHhhhhcccC-ccCCCHH
Confidence 9999999999999999999999999975432111 1111 11110000 0000000 00000 0000000 0000011
Q ss_pred HHHHHHhcCCCh----HHH-HHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCe
Q 024469 162 FLTIKIYQLCPP----EDL-ELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNE 236 (267)
Q Consensus 162 ~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~ 236 (267)
............ ... .....+..........+... +. ....++|+++|||++|.+++.+.++.+++. ++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~--l~-~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~ 354 (383)
T PLN03084 279 DAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSI--LT-DKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHK 354 (383)
T ss_pred HHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhh--hc-cccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCe
Confidence 111100000000 000 01111111000000011100 00 012378999999999999999988888876 5789
Q ss_pred EEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 237 VMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 237 ~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
++++++|||++++|+|+++++.|.+|+++
T Consensus 355 l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 355 LIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred EEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999863
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=4.3e-32 Score=243.12 Aligned_cols=250 Identities=15% Similarity=0.166 Sum_probs=153.3
Q ss_pred cceEEEecCCCCChhchHH-HHHHHhc---CCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHH-HHHHcCCCCCcEEEE
Q 024469 9 EKHFVLVHGVNHGAWCWYK-LKARLVA---GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLM-EVLASLPAEEKVILV 83 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~-~~~~L~~---~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~-~~i~~l~~~~~vilv 83 (267)
++||||+||++.+...|.. +++.|.+ .+|+|+++|+||||.|+.+.+..|+++++++++. .+++.+ +.++++||
T Consensus 201 k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~l-g~~k~~LV 279 (481)
T PLN03087 201 KEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERY-KVKSFHIV 279 (481)
T ss_pred CCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHc-CCCCEEEE
Confidence 4799999999999999985 5577752 5799999999999999876545689999999994 889988 56899999
Q ss_pred eeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCccccccccc-----ccC-CCCCCcc-ce
Q 024469 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFS-----QCD-ASNPSHI-SM 156 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~-~~ 156 (267)
||||||++++.+|.++|++|++||++++......... .......+... ....|....+. +.. . ..... ..
T Consensus 280 GhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~-~~~~~~~~ 356 (481)
T PLN03087 280 AHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGV-QATQYVMRKVA-PRRVWPPIAFGASVACWYEHI-SRTICLVI 356 (481)
T ss_pred EECHHHHHHHHHHHhChHhccEEEEECCCccccccch-hHHHHHHHHhc-ccccCCccccchhHHHHHHHH-Hhhhhccc
Confidence 9999999999999999999999999986321110000 00001111000 00000000000 000 0 00000 00
Q ss_pred eechHHHH---HHHhcCCChHHHHHHHHhcCC--Cccc--ccc-cccc----cc-CCc-cCCCCccEEEEEeCCCccCCh
Q 024469 157 LFGREFLT---IKIYQLCPPEDLELAKMLVRP--GSMF--IDN-LSKE----SK-FSD-EGYGSVKRVYLVCEEDIGLPK 222 (267)
Q Consensus 157 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~-~~~~----~~-~~~-~~~~~iP~l~i~g~~D~~~~~ 222 (267)
......+. ....... ... .+....... ...+ ... +... .. +.. ....++|+++|+|++|.++|+
T Consensus 357 ~~~~~~~~~~~~l~~~~~-~~~-~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~ 434 (481)
T PLN03087 357 CKNHRLWEFLTRLLTRNR-MRT-FLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPV 434 (481)
T ss_pred ccchHHHHHHHHHhhhhh-hhH-HHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCH
Confidence 00000000 0000000 000 000000000 0000 000 0000 00 000 011378999999999999999
Q ss_pred HHHHHHHHcCCCCeEEEecCCCCCCCC-CCcHHHHHHHHHHHH
Q 024469 223 QFQHWMIQNYPVNEVMEIKGGDHMAML-SDPQKLCDCLSQISL 264 (267)
Q Consensus 223 ~~~~~~~~~~p~~~~~~i~~~gH~~~~-e~p~~~~~~l~~f~~ 264 (267)
+..+.+++.+|++++++++++||++++ |+|++|++.|++|.+
T Consensus 435 ~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 435 ECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhh
Confidence 999999999999999999999999996 999999999999975
No 15
>PLN02578 hydrolase
Probab=100.00 E-value=8e-32 Score=236.24 Aligned_cols=244 Identities=18% Similarity=0.207 Sum_probs=154.8
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
+|+|||||||++.++..|+.+++.|++ +|+|+++|+||||.|+++. ..|+...+++++.++++++ ..++++||||||
T Consensus 85 ~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~l~~~i~~~-~~~~~~lvG~S~ 161 (354)
T PLN02578 85 EGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKAL-IEYDAMVWRDQVADFVKEV-VKEPAVLVGNSL 161 (354)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcc-cccCHHHHHHHHHHHHHHh-ccCCeEEEEECH
Confidence 478999999999999999999999965 5999999999999998764 3589999999999999998 558999999999
Q ss_pred hhHHHHHHhhhCCCccceEEEEeccCCCCCCCh--h-------hhHHH-HHhhcCCCCccccccccc--ccCCCCCCccc
Q 024469 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRP--S-------FVLEQ-YSEKMGKEDDSWLDTQFS--QCDASNPSHIS 155 (267)
Q Consensus 88 GG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~--~-------~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 155 (267)
||.++..+|.++|++|+++|++++......... . ..... +.... ..+...... .+.. ...+..
T Consensus 162 Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~ 236 (354)
T PLN02578 162 GGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPL----KEWFQRVVLGFLFWQ-AKQPSR 236 (354)
T ss_pred HHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHH----HHHHHHHHHHHHHHH-hcCHHH
Confidence 999999999999999999999986432110000 0 00000 00000 000000000 0000 000000
Q ss_pred e------ee-----chHHHHHHHhc-CCChHHHHHHHHhcCCCccccccccccccCC-ccCCCCccEEEEEeCCCccCCh
Q 024469 156 M------LF-----GREFLTIKIYQ-LCPPEDLELAKMLVRPGSMFIDNLSKESKFS-DEGYGSVKRVYLVCEEDIGLPK 222 (267)
Q Consensus 156 ~------~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iP~l~i~g~~D~~~~~ 222 (267)
. .+ ..+++.+.... ...+........++. .+.... ...... .....++|+++|+|++|.++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~l~~i~~PvLiI~G~~D~~v~~ 312 (354)
T PLN02578 237 IESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMS---RFLFNQ-SRYTLDSLLSKLSCPLLLLWGDLDPWVGP 312 (354)
T ss_pred HHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHH---HHhcCC-CCCCHHHHhhcCCCCEEEEEeCCCCCCCH
Confidence 0 00 00111111100 000000000000000 000000 000000 0122378999999999999999
Q ss_pred HHHHHHHHcCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 223 QFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 223 ~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
+.++.+.+..|+++++++ ++||++++|+|++|++.|.+|++
T Consensus 313 ~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 313 AKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999999999 59999999999999999999985
No 16
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.2e-31 Score=226.53 Aligned_cols=246 Identities=16% Similarity=0.150 Sum_probs=156.7
Q ss_pred cCC-ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEE
Q 024469 5 VGM-EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILV 83 (267)
Q Consensus 5 ~~~-~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilv 83 (267)
+|. .+++|||+||++.+...|+.+.+.|+. +|+|+++|+||||.|+.+....++++++++++.++++++ ..++++|+
T Consensus 23 ~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~-~~~~~~lv 100 (278)
T TIGR03056 23 MGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE-GLSPDGVI 100 (278)
T ss_pred cCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc-CCCCceEE
Confidence 343 368999999999999999999999965 699999999999999865544579999999999999998 55789999
Q ss_pred eeChhhHHHHHHhhhCCCccceEEEEeccCCC-CCCCh--hhhHHHHHhhcCCCCcccccccccccCCCCCCccceeech
Q 024469 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPD-TTHRP--SFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR 160 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
||||||++++.+|.++|+++.++|++++.... .+... ........... ............ . .. . . .
T Consensus 101 G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~--~~-~----~-~ 169 (278)
T TIGR03056 101 GHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACN--PFTPPMMSRGAA-D--QQ-R----V-E 169 (278)
T ss_pred EECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhc--ccchHHHHhhcc-c--Cc-c----h-h
Confidence 99999999999999999999999999874321 11000 00000000000 000000000000 0 00 0 0 0
Q ss_pred HHHHHHHhcCCChHHHHHHHHhcCCCcc---ccccccc--cccCC-ccCCCCccEEEEEeCCCccCChHHHHHHHHcCCC
Q 024469 161 EFLTIKIYQLCPPEDLELAKMLVRPGSM---FIDNLSK--ESKFS-DEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPV 234 (267)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~-~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~ 234 (267)
.+.... ..................... ..+.+.. ..... .....++|+++|+|++|.++|++..+.+.+.+++
T Consensus 170 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~ 248 (278)
T TIGR03056 170 RLIRDT-GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPT 248 (278)
T ss_pred HHhhcc-ccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccC
Confidence 000000 000000000000000000000 0000000 00000 1122378999999999999999999999988999
Q ss_pred CeEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 235 NEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 235 ~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
.++++++++||++++|+|+++++.|.+|++
T Consensus 249 ~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 249 ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 999999999999999999999999999974
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.1e-31 Score=223.37 Aligned_cols=232 Identities=15% Similarity=0.222 Sum_probs=156.3
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
++++|||+||++.++..|..+++.|.+ +|+|+++|+||||.|+......++++++++++.++++.+ +.++++|+||||
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~l~G~S~ 89 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL-NIERFHFVGHAL 89 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh-CCCcEEEEEech
Confidence 468999999999999999999999965 699999999999999865445689999999999999998 557899999999
Q ss_pred hhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhH--HHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHH
Q 024469 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVL--EQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTI 165 (267)
Q Consensus 88 GG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
||+++..+|.++|++|.++|+++++............ ..+.... ....+...... ..+...++..
T Consensus 90 Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----------~~~~~~~~~~ 156 (257)
T TIGR03611 90 GGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHA--GPEAYVHAQAL-----------FLYPADWISE 156 (257)
T ss_pred hHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhcc--Ccchhhhhhhh-----------hhccccHhhc
Confidence 9999999999999999999999975432110000000 0000000 00000000000 0000000000
Q ss_pred --------HH---hcCCC-hHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCC
Q 024469 166 --------KI---YQLCP-PEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP 233 (267)
Q Consensus 166 --------~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p 233 (267)
.. ..... .........+.. .++. ......++|+++++|++|.++|++.++.+.+..|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-----~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 225 (257)
T TIGR03611 157 NAARLAADEAHALAHFPGKANVLRRINALEA------FDVS-----ARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP 225 (257)
T ss_pred cchhhhhhhhhcccccCccHHHHHHHHHHHc------CCcH-----HHhcccCccEEEEecCcCcccCHHHHHHHHHhcC
Confidence 00 00000 000000000000 0000 0011237899999999999999999999999999
Q ss_pred CCeEEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 234 VNEVMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 234 ~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
+.+++.++++||++++|+|+++++.|.+|+++
T Consensus 226 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 226 NAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999863
No 18
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=5.8e-32 Score=232.79 Aligned_cols=248 Identities=21% Similarity=0.275 Sum_probs=156.8
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcC-CCeEEEeCCCCCCC-CCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEee
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAASGI-NMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~-g~~via~Dl~G~G~-S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGH 85 (267)
.++||||||||+++.+.|+.+++.|... |++|.|+|++|||. |..+.+..|++.++++.+.+++... ..++++||||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~-~~~~~~lvgh 135 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV-FVEPVSLVGH 135 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-cCcceEEEEe
Confidence 4789999999999999999999999665 38999999999995 4455555699999999999999988 5678999999
Q ss_pred ChhhHHHHHHhhhCCCccceEEEEe---ccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHH
Q 024469 86 SLGGVTLALAADKFPHKISVAVFVT---AFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREF 162 (267)
Q Consensus 86 SmGG~i~~~~a~~~p~~v~~lvli~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
||||.++..+|..+|+.|++||+++ +.................... .....+...... . + ...+....
T Consensus 136 S~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~------~-~-~~~~~~~~ 206 (326)
T KOG1454|consen 136 SLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFL-SALELLIPLSLT------E-P-VRLVSEGL 206 (326)
T ss_pred CcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhc-cHhhhcCccccc------c-c-hhheeHhh
Confidence 9999999999999999999999555 322211111111100000000 000000000000 0 0 00000000
Q ss_pred HHHHHhcCC-ChHHHHHHHHhc-CC-----Ccc----ccccccc--cccCCcc-CCCCccEEEEEeCCCccCChHHHHHH
Q 024469 163 LTIKIYQLC-PPEDLELAKMLV-RP-----GSM----FIDNLSK--ESKFSDE-GYGSVKRVYLVCEEDIGLPKQFQHWM 228 (267)
Q Consensus 163 ~~~~~~~~~-~~~~~~~~~~~~-~~-----~~~----~~~~~~~--~~~~~~~-~~~~iP~l~i~g~~D~~~~~~~~~~~ 228 (267)
......... ...........+ ++ .+. +...+.. ....... ...++|+++|||++|+++|.+.++.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~ 286 (326)
T KOG1454|consen 207 LRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEEL 286 (326)
T ss_pred hcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHH
Confidence 000000000 000000000111 00 000 0000000 0000011 12258999999999999999999999
Q ss_pred HHcCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 229 IQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 229 ~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
.+.+|++++++|++|||++|+|+|++|++.|..|++.
T Consensus 287 ~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 287 KKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred HhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 9888999999999999999999999999999999976
No 19
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=2.5e-31 Score=220.70 Aligned_cols=232 Identities=19% Similarity=0.153 Sum_probs=141.3
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
+|+||||||++.++..|+.+++.| + +|+|+++|+||||.|+.+. ..+++++++++.++++++ +.++++|||||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~~-~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS--VDGFADVSRLLSQTLQSY-NILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc--ccCHHHHHHHHHHHHHHc-CCCCeEEEEECHH
Confidence 689999999999999999999998 4 5999999999999998654 358999999999999998 5689999999999
Q ss_pred hHHHHHHhhhCCC-ccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCC---C---CCccceeechH
Q 024469 89 GVTLALAADKFPH-KISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDAS---N---PSHISMLFGRE 161 (267)
Q Consensus 89 G~i~~~~a~~~p~-~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~ 161 (267)
|.+++.+|.++|+ +|+++|++++.... ............ ...|... +...... . ..+........
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~--~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGL--QNAEERQARWQN-----DRQWAQR-FRQEPLEQVLADWYQQPVFASLNAE 148 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCC--CCHHHHHHHHhh-----hHHHHHH-hccCcHHHHHHHHHhcchhhccCcc
Confidence 9999999999866 49999998754211 111100000000 0011000 0000000 0 00000000000
Q ss_pred HHHHHHhcCCChHHHHHHHHhcCCCccccccccccccC-CccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEe
Q 024469 162 FLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKF-SDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEI 240 (267)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i 240 (267)
................... +..... +.....+ ......++|+++|+|++|..+. . +++. ++++++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~----~~~~-~~~~~~~i 216 (242)
T PRK11126 149 QRQQLVAKRSNNNGAAVAA-MLEATS-----LAKQPDLRPALQALTFPFYYLCGERDSKFQ-A----LAQQ-LALPLHVI 216 (242)
T ss_pred HHHHHHHhcccCCHHHHHH-HHHhcC-----cccCCcHHHHhhccCCCeEEEEeCCcchHH-H----HHHH-hcCeEEEe
Confidence 0000000000000000000 000000 0000000 0112237899999999998653 2 2222 36899999
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 241 KGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 241 ~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
++|||++++|+|+++++.|.+|+++
T Consensus 217 ~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 217 PNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CCCCCchhhhChHHHHHHHHHHHhh
Confidence 9999999999999999999999875
No 20
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.98 E-value=2.3e-31 Score=219.31 Aligned_cols=233 Identities=18% Similarity=0.205 Sum_probs=145.6
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhh
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG 89 (267)
++|||+||++.++..|+.+++.|.+ +|+|+++|+||||.|+.. ..++++++++++.+.+ .++++||||||||
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~~~~~-----~~~~~lvG~S~Gg 76 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF--GPLSLADAAEAIAAQA-----PDPAIWLGWSLGG 76 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC--CCcCHHHHHHHHHHhC-----CCCeEEEEEcHHH
Confidence 8999999999999999999999965 699999999999998754 2368888888776543 2689999999999
Q ss_pred HHHHHHhhhCCCccceEEEEeccCCCCCCC--h----hhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHH
Q 024469 90 VTLALAADKFPHKISVAVFVTAFMPDTTHR--P----SFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFL 163 (267)
Q Consensus 90 ~i~~~~a~~~p~~v~~lvli~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (267)
.++..+|.++|++|.++|++++........ . ......+..................... .. . ........+
T Consensus 77 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~ 153 (245)
T TIGR01738 77 LVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTL-GT-P-TARQDARAL 153 (245)
T ss_pred HHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh-cC-C-ccchHHHHH
Confidence 999999999999999999998753211000 0 0011111110000000000000000000 00 0 000000000
Q ss_pred HHHHhcCCCh--HHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEec
Q 024469 164 TIKIYQLCPP--EDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIK 241 (267)
Q Consensus 164 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~ 241 (267)
...+...... ............ .+.. ......++|+++|+|++|.++|++..+.+.+..|+.++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-----~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 223 (245)
T TIGR01738 154 KQTLLARPTPNVQVLQAGLEILAT-----VDLR-----QPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFA 223 (245)
T ss_pred HHHhhccCCCCHHHHHHHHHHhhc-----ccHH-----HHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeC
Confidence 0000000000 000000000000 0000 001223789999999999999999999899899999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHH
Q 024469 242 GGDHMAMLSDPQKLCDCLSQIS 263 (267)
Q Consensus 242 ~~gH~~~~e~p~~~~~~l~~f~ 263 (267)
++||++++|+|++|++.|.+|+
T Consensus 224 ~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 224 KAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999999999985
No 21
>PRK06489 hypothetical protein; Provisional
Probab=99.98 E-value=3.4e-31 Score=232.78 Aligned_cols=244 Identities=12% Similarity=0.162 Sum_probs=146.9
Q ss_pred cceEEEecCCCCChhchH--HHHHHH-------hcCCCeEEEeCCCCCCCCCCCCCc------ccChHHhhHHHHHHH-H
Q 024469 9 EKHFVLVHGVNHGAWCWY--KLKARL-------VAGGHRVTAVDLAASGINMKRIED------VHTFHAYSEPLMEVL-A 72 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~--~~~~~L-------~~~g~~via~Dl~G~G~S~~~~~~------~~~~~~~~~~l~~~i-~ 72 (267)
++|||||||++.+...|. .+.+.| ...+|+||++|+||||.|+.+.+. .|+++++++++.+++ +
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 789999999999988886 455444 135699999999999999865321 479999999988865 7
Q ss_pred cCCCCCcEE-EEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHH-HHhhcCCCCcccccccccccCCCC
Q 024469 73 SLPAEEKVI-LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQ-YSEKMGKEDDSWLDTQFSQCDASN 150 (267)
Q Consensus 73 ~l~~~~~vi-lvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 150 (267)
++ +.++++ ||||||||++++.+|.++|++|++||++++.... .......... ...... ....+....+ .
T Consensus 149 ~l-gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~ 219 (360)
T PRK06489 149 GL-GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTE-MSGRNWMWRRMLIESIR-NDPAWNNGNY------T 219 (360)
T ss_pred hc-CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCccc-ccHHHHHHHHHHHHHHH-hCCCCCCCCC------C
Confidence 77 556774 8999999999999999999999999999874211 1111110100 000000 0000000000 0
Q ss_pred CCccceeechHHHHH----------HH-hcCCChHH-HHHHHHh----cCCCc-cccccccc--cccC-CccCCCCccEE
Q 024469 151 PSHISMLFGREFLTI----------KI-YQLCPPED-LELAKML----VRPGS-MFIDNLSK--ESKF-SDEGYGSVKRV 210 (267)
Q Consensus 151 ~~~~~~~~~~~~~~~----------~~-~~~~~~~~-~~~~~~~----~~~~~-~~~~~~~~--~~~~-~~~~~~~iP~l 210 (267)
..+.. . ...... .. ........ ....... ..... .+...+.. .... ......++|++
T Consensus 220 ~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvL 296 (360)
T PRK06489 220 TQPPS--L-KRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVL 296 (360)
T ss_pred CCHHH--H-HHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEE
Confidence 00000 0 000000 00 00000000 0000000 00000 00000000 0000 00112378999
Q ss_pred EEEeCCCccCChHHH--HHHHHcCCCCeEEEecCC----CCCCCCCCcHHHHHHHHHHHHh
Q 024469 211 YLVCEEDIGLPKQFQ--HWMIQNYPVNEVMEIKGG----DHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 211 ~i~g~~D~~~~~~~~--~~~~~~~p~~~~~~i~~~----gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
+|+|++|.++|++.+ +++++.+|++++++|++| ||+++ |+|++|++.|.+|+++
T Consensus 297 vI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 297 AINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred EEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHh
Confidence 999999999999875 788999999999999996 99997 8999999999999976
No 22
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.98 E-value=3e-31 Score=232.29 Aligned_cols=240 Identities=14% Similarity=0.135 Sum_probs=150.4
Q ss_pred cceEEEecCCCCChh-chHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCC-----CCcEEE
Q 024469 9 EKHFVLVHGVNHGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA-----EEKVIL 82 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~-----~~~vil 82 (267)
.++|||+||++.+.. .|+.+++.|++.||+|+++|+||||.|+.+....++++++++++.++++.+.. ..+++|
T Consensus 87 ~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~L 166 (349)
T PLN02385 87 KAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFL 166 (349)
T ss_pred CeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEE
Confidence 468999999988765 46889999987899999999999999986543346899999999999987631 237999
Q ss_pred EeeChhhHHHHHHhhhCCCccceEEEEeccCCCCC--CChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeech
Q 024469 83 VGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTT--HRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR 160 (267)
Q Consensus 83 vGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
+||||||++++.+|.++|++|.++|++++...... ..+. ....+..........+ ... + ........+..
T Consensus 167 vGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~-~~~~~~~~~~~~~p~~---~~~---~-~~~~~~~~~~~ 238 (349)
T PLN02385 167 FGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPP-LVLQILILLANLLPKA---KLV---P-QKDLAELAFRD 238 (349)
T ss_pred EEeccchHHHHHHHHhCcchhhheeEecccccccccccCch-HHHHHHHHHHHHCCCc---eec---C-CCccccccccC
Confidence 99999999999999999999999999997532111 1111 1111111000000000 000 0 00000000000
Q ss_pred HHHHHH-HhcC---CChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcC--CC
Q 024469 161 EFLTIK-IYQL---CPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY--PV 234 (267)
Q Consensus 161 ~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~--p~ 234 (267)
...... .++. ...........+++.. .++.. .....++|+++|+|++|.++|++.++.+.+.. ++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~-----~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~ 309 (349)
T PLN02385 239 LKKRKMAEYNVIAYKDKPRLRTAVELLRTT----QEIEM-----QLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSD 309 (349)
T ss_pred HHHHHHhhcCcceeCCCcchHHHHHHHHHH----HHHHH-----hcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCC
Confidence 000000 0000 0000000000000000 00000 01123789999999999999999999888776 56
Q ss_pred CeEEEecCCCCCCCCCCcHH----HHHHHHHHHHh
Q 024469 235 NEVMEIKGGDHMAMLSDPQK----LCDCLSQISLK 265 (267)
Q Consensus 235 ~~~~~i~~~gH~~~~e~p~~----~~~~l~~f~~~ 265 (267)
.++++++++||++++|+|++ +++.|.+|+.+
T Consensus 310 ~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~ 344 (349)
T PLN02385 310 KKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDS 344 (349)
T ss_pred ceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHH
Confidence 89999999999999999987 77888888876
No 23
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.5e-31 Score=233.64 Aligned_cols=251 Identities=14% Similarity=0.103 Sum_probs=148.0
Q ss_pred cCCccceEEEecCCCCChh------------chHHHHH---HHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHH
Q 024469 5 VGMEEKHFVLVHGVNHGAW------------CWYKLKA---RLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLME 69 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~~~------------~w~~~~~---~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~ 69 (267)
.|.+++|+|||||++.+.. .|..+++ .|...+||||++|+||||.|.. ..+++.++++++.+
T Consensus 53 ~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---~~~~~~~~a~dl~~ 129 (343)
T PRK08775 53 IGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---VPIDTADQADAIAL 129 (343)
T ss_pred eccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---CCCCHHHHHHHHHH
Confidence 4544668888887776655 6888886 5743469999999999998842 24688999999999
Q ss_pred HHHcCCCCCc-EEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCccc--cccccccc
Q 024469 70 VLASLPAEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSW--LDTQFSQC 146 (267)
Q Consensus 70 ~i~~l~~~~~-vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 146 (267)
+++++ +.++ ++||||||||++++.+|.++|++|.+||++++..... ..........+......... ........
T Consensus 130 ll~~l-~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (343)
T PRK08775 130 LLDAL-GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAH--PYAAAWRALQRRAVALGQLQCAEKHGLALA 206 (343)
T ss_pred HHHHc-CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCC--HHHHHHHHHHHHHHHcCCCCCCchhHHHHH
Confidence 99999 4455 5799999999999999999999999999999753211 10000010000000000000 00000000
Q ss_pred CCCCCCccceeechHHHHHHHhcCCC-------hHHHHHH----HHhcC-CC-ccccccccccccC--CccCCCCccEEE
Q 024469 147 DASNPSHISMLFGREFLTIKIYQLCP-------PEDLELA----KMLVR-PG-SMFIDNLSKESKF--SDEGYGSVKRVY 211 (267)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~----~~~~~-~~-~~~~~~~~~~~~~--~~~~~~~iP~l~ 211 (267)
. .... ......+.+...+..... ....... ..... .. ..+.. +...... ......++|+++
T Consensus 207 ~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~I~~PtLv 282 (343)
T PRK08775 207 R--QLAM-LSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLR-LSESIDLHRVDPEAIRVPTVV 282 (343)
T ss_pred H--HHHH-HHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHH-HHHHHhhcCCChhcCCCCeEE
Confidence 0 0000 000000000011100000 0000000 00000 00 00000 0000000 011223789999
Q ss_pred EEeCCCccCChHHHHHHHHcC-CCCeEEEecC-CCCCCCCCCcHHHHHHHHHHHHh
Q 024469 212 LVCEEDIGLPKQFQHWMIQNY-PVNEVMEIKG-GDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 212 i~g~~D~~~~~~~~~~~~~~~-p~~~~~~i~~-~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
|+|++|.++|++..+.+.+.+ |+++++++++ +||++++|+|++|++.|.+|+++
T Consensus 283 i~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 283 VAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred EEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 999999999999888888877 7899999985 99999999999999999999976
No 24
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=7.1e-32 Score=219.33 Aligned_cols=227 Identities=23% Similarity=0.352 Sum_probs=146.6
Q ss_pred EEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC-cccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH
Q 024469 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (267)
Q Consensus 12 ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~ 90 (267)
|||+||++.++..|..+++.|+ +||+|+++|+||||.|+.... ..++++++++++.++++++ ..++++||||||||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL-GIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT-TTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc-ccccccccccccccc
Confidence 7999999999999999999995 689999999999999986543 3579999999999999999 447999999999999
Q ss_pred HHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHHHhcC
Q 024469 91 TLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQL 170 (267)
Q Consensus 91 i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (267)
+++.++.++|++|.++|++++...............+.+.. ..+......... . .........+........
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~- 150 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRL----LAWRSRSLRRLA--S-RFFYRWFDGDEPEDLIRS- 150 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHH----HHHHHHHHHHHH--H-HHHHHHHTHHHHHHHHHH-
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhh----hhcccccccccc--c-cccccccccccccccccc-
Confidence 99999999999999999999754311000000001111110 000000000000 0 000000000000000000
Q ss_pred CChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCCCCCC
Q 024469 171 CPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLS 250 (267)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e 250 (267)
........ .+.. ....++.. .....++|+++++|++|.+++.+..+.+.+..|++++++++++||++++|
T Consensus 151 ---~~~~~~~~-~~~~-~~~~~~~~-----~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 220 (228)
T PF12697_consen 151 ---SRRALAEY-LRSN-LWQADLSE-----ALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLE 220 (228)
T ss_dssp ---HHHHHHHH-HHHH-HHHHHHHH-----HHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHH
T ss_pred ---cccccccc-cccc-cccccccc-----cccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHH
Confidence 00000000 0000 00000000 01112789999999999999999999999989999999999999999999
Q ss_pred CcHHHHHH
Q 024469 251 DPQKLCDC 258 (267)
Q Consensus 251 ~p~~~~~~ 258 (267)
+|++|+++
T Consensus 221 ~p~~~~~a 228 (228)
T PF12697_consen 221 QPDEVAEA 228 (228)
T ss_dssp SHHHHHHH
T ss_pred CHHHHhcC
Confidence 99999975
No 25
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=7.2e-30 Score=216.32 Aligned_cols=235 Identities=14% Similarity=0.119 Sum_probs=145.5
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC---CCCcEEEEeeC
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVILVGHS 86 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~vilvGHS 86 (267)
+.|+|+||++.++..|..+++.|.++||+|+++|+||||.|+.......++.++++|+.+.++.+. ..++++|+|||
T Consensus 26 ~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S 105 (276)
T PHA02857 26 ALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHS 105 (276)
T ss_pred EEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcC
Confidence 455666999999999999999998889999999999999997543233466777777777776431 23589999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHH
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (267)
|||++++.+|.++|++|+++|++++......................+ .... . ...+ ...........
T Consensus 106 ~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~-----~~~~--~~~~~~~~~~~ 173 (276)
T PHA02857 106 MGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYP--NKIV---G-----KLCP--ESVSRDMDEVY 173 (276)
T ss_pred chHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCC--CCcc---C-----CCCH--hhccCCHHHHH
Confidence 999999999999999999999999754311111011111110000000 0000 0 0000 00000000000
Q ss_pred HhcCCC-----hHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcC-CCCeEEEe
Q 024469 167 IYQLCP-----PEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY-PVNEVMEI 240 (267)
Q Consensus 167 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~-p~~~~~~i 240 (267)
.+...+ .....+....... ...... .....++|+++|+|++|.++|++.++++.+.. +..+++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~ 244 (276)
T PHA02857 174 KYQYDPLVNHEKIKAGFASQVLKA----TNKVRK-----IIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIY 244 (276)
T ss_pred HHhcCCCccCCCccHHHHHHHHHH----HHHHHH-----hcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEe
Confidence 000000 0000000000000 000000 01223789999999999999999999888876 46789999
Q ss_pred cCCCCCCCCCCc---HHHHHHHHHHHHh
Q 024469 241 KGGDHMAMLSDP---QKLCDCLSQISLK 265 (267)
Q Consensus 241 ~~~gH~~~~e~p---~~~~~~l~~f~~~ 265 (267)
+++||+++.|++ +++.+.+.+|+++
T Consensus 245 ~~~gH~~~~e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 245 EGAKHHLHKETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred CCCcccccCCchhHHHHHHHHHHHHHHH
Confidence 999999999988 4677888888865
No 26
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=9.8e-30 Score=221.04 Aligned_cols=237 Identities=16% Similarity=0.149 Sum_probs=145.2
Q ss_pred cceEEEecCCCCC-hhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCC-----CCcEEE
Q 024469 9 EKHFVLVHGVNHG-AWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA-----EEKVIL 82 (267)
Q Consensus 9 ~~~ivlvHG~~~~-~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~-----~~~vil 82 (267)
.++||||||++.+ .+.|..+...|.++||+|+++|+||||.|+.......+++.+++|+.++++.+.. ..+++|
T Consensus 59 ~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l 138 (330)
T PLN02298 59 RALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFL 138 (330)
T ss_pred ceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEE
Confidence 4569999999855 4567777888988899999999999999985443446889999999999997731 247999
Q ss_pred EeeChhhHHHHHHhhhCCCccceEEEEeccCCCCC-CChhhhHH---HHHhhcCCCCcccccccccccCCCCCCccceee
Q 024469 83 VGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTT-HRPSFVLE---QYSEKMGKEDDSWLDTQFSQCDASNPSHISMLF 158 (267)
Q Consensus 83 vGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
+||||||++++.++.++|++|+++|++++...... ..+..... .+..... + ... . .+ .........
T Consensus 139 ~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~-----~-~~-~~~~~~~~~ 208 (330)
T PLN02298 139 YGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFL-P--TLA-----I-VP-TADLLEKSV 208 (330)
T ss_pred EEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHHC-C--CCc-----c-cc-CCCcccccc
Confidence 99999999999999999999999999997532111 00000011 1111110 0 000 0 00 000000000
Q ss_pred chHHHHHHHhcCCCh-----HHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcC-
Q 024469 159 GREFLTIKIYQLCPP-----EDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY- 232 (267)
Q Consensus 159 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~- 232 (267)
.... ...+....+. ........+.+. .+.+.. .....++|+++|+|++|.++|++.++.+.+.+
T Consensus 209 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~ 278 (330)
T PLN02298 209 KVPA-KKIIAKRNPMRYNGKPRLGTVVELLRV----TDYLGK-----KLKDVSIPFIVLHGSADVVTDPDVSRALYEEAK 278 (330)
T ss_pred cCHH-HHHHHHhCccccCCCccHHHHHHHHHH----HHHHHH-----hhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 0000 0000000000 000000000000 000000 01123789999999999999999999887765
Q ss_pred -CCCeEEEecCCCCCCCCCCcHHH----HHHHHHHHHh
Q 024469 233 -PVNEVMEIKGGDHMAMLSDPQKL----CDCLSQISLK 265 (267)
Q Consensus 233 -p~~~~~~i~~~gH~~~~e~p~~~----~~~l~~f~~~ 265 (267)
+++++++++++||++++++|+.+ .+.|.+|+.+
T Consensus 279 ~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 279 SEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred cCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999764 4555666654
No 27
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=8.7e-30 Score=210.41 Aligned_cols=238 Identities=14% Similarity=0.185 Sum_probs=152.7
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
.++|||+||++.+...|..+++.|+ .+|+|+++|+||||.|+.+. ..+++.++++++.++++.+ ..++++|+|||||
T Consensus 13 ~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~-~~~~v~liG~S~G 89 (251)
T TIGR02427 13 APVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHL-GIERAVFCGLSLG 89 (251)
T ss_pred CCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-CCCceEEEEeCch
Confidence 5789999999999999999999996 57999999999999997543 3579999999999999998 5579999999999
Q ss_pred hHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccc-cccCCCCCCccceeechHHHHHHH
Q 024469 89 GVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQF-SQCDASNPSHISMLFGREFLTIKI 167 (267)
Q Consensus 89 G~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 167 (267)
|++++.+|.++|++|.++|++++......... ..................... ..+.......... ..+.+...+
T Consensus 90 g~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 165 (251)
T TIGR02427 90 GLIAQGLAARRPDRVRALVLSNTAAKIGTPES--WNARIAAVRAEGLAALADAVLERWFTPGFREAHPA--RLDLYRNML 165 (251)
T ss_pred HHHHHHHHHHCHHHhHHHhhccCccccCchhh--HHHHHhhhhhccHHHHHHHHHHHHcccccccCChH--HHHHHHHHH
Confidence 99999999999999999999986432111110 000000000000000000000 0000000000000 000000000
Q ss_pred hcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCCC
Q 024469 168 YQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMA 247 (267)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~ 247 (267)
... ........... +............++|+++++|++|.++|++..+.+.+..++.++++++++||++
T Consensus 166 ~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 234 (251)
T TIGR02427 166 VRQ-PPDGYAGCCAA----------IRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIP 234 (251)
T ss_pred Hhc-CHHHHHHHHHH----------HhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcc
Confidence 000 00000000000 0000000001123689999999999999999888888889999999999999999
Q ss_pred CCCCcHHHHHHHHHHHH
Q 024469 248 MLSDPQKLCDCLSQISL 264 (267)
Q Consensus 248 ~~e~p~~~~~~l~~f~~ 264 (267)
++|+|+++++.|.+|++
T Consensus 235 ~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 235 CVEQPEAFNAALRDFLR 251 (251)
T ss_pred cccChHHHHHHHHHHhC
Confidence 99999999999999863
No 28
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=7.4e-30 Score=222.62 Aligned_cols=252 Identities=12% Similarity=0.111 Sum_probs=143.6
Q ss_pred ceEEEecCCCCChhchHHHH---HHHhcCCCeEEEeCCCCCCCCCCCCC--cccChHH-----hhHHHHH----HHHcCC
Q 024469 10 KHFVLVHGVNHGAWCWYKLK---ARLVAGGHRVTAVDLAASGINMKRIE--DVHTFHA-----YSEPLME----VLASLP 75 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~---~~L~~~g~~via~Dl~G~G~S~~~~~--~~~~~~~-----~~~~l~~----~i~~l~ 75 (267)
++|||+||++.+...|..++ +.|...+||||++|+||||.|+.+.. ..|++++ +++++.+ ++++|
T Consensus 42 ~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l- 120 (339)
T PRK07581 42 NAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF- 120 (339)
T ss_pred CEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh-
Confidence 45666666665666676554 46755679999999999999975532 1355544 4666655 66778
Q ss_pred CCCc-EEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCC--
Q 024469 76 AEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPS-- 152 (267)
Q Consensus 76 ~~~~-vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 152 (267)
+.++ ++||||||||++++.+|.++|++|++||++++....... ...........+. ....|....+.. .+ ...
T Consensus 121 gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~-~~~~~~~~~~~l~-~~~~~~~~~~~~-~~-~~~~~ 196 (339)
T PRK07581 121 GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPH-NFVFLEGLKAALT-ADPAFNGGWYAE-PP-ERGLR 196 (339)
T ss_pred CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHH-HHHHHHHHHHHHH-hCCCCCCCCCCC-cH-HHHHH
Confidence 5578 589999999999999999999999999999865321110 0001111110000 000110000000 00 000
Q ss_pred ---c--cceeechHHHHHHHhcCCC----hHHH-HHHHHhc---CCCccc--cc-----ccccc----ccCC-ccCCCCc
Q 024469 153 ---H--ISMLFGREFLTIKIYQLCP----PEDL-ELAKMLV---RPGSMF--ID-----NLSKE----SKFS-DEGYGSV 207 (267)
Q Consensus 153 ---~--~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~---~~~~~~--~~-----~~~~~----~~~~-~~~~~~i 207 (267)
. ....+.+.++....+.... .+.. ....... .+.... .+ .+... ..+. .....++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~ 276 (339)
T PRK07581 197 AHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITA 276 (339)
T ss_pred HHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCC
Confidence 0 0000001111100000000 0000 0000000 000000 00 00000 0000 0112378
Q ss_pred cEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecC-CCCCCCCCCcHHHHHHHHHHHHhh
Q 024469 208 KRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKG-GDHMAMLSDPQKLCDCLSQISLKY 266 (267)
Q Consensus 208 P~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~-~gH~~~~e~p~~~~~~l~~f~~~~ 266 (267)
|+++|+|++|.++|++.++.+++.+|+++++++++ |||++++|+|+.+++.|.+|+++|
T Consensus 277 PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 277 KTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 999999999999999999999984
No 29
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=3.9e-29 Score=206.08 Aligned_cols=240 Identities=21% Similarity=0.224 Sum_probs=148.8
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC-cccChHHhhHH-HHHHHHcCCCCCcEEEEeeC
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEP-LMEVLASLPAEEKVILVGHS 86 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~-l~~~i~~l~~~~~vilvGHS 86 (267)
+++|||+||++.+.+.|+.+.+.|+ .||+|+++|+||||.|+.+.. ..+++++++++ +.++++.+ ..++++|+|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL-GIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc-CCCeEEEEEec
Confidence 4799999999999999999999997 689999999999999976532 34688999998 77777877 55799999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHH-----HHhhcC-CCCcccccccccccCCCCCCccceeech
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQ-----YSEKMG-KEDDSWLDTQFSQCDASNPSHISMLFGR 160 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
|||.+++.+|.++|++|.++|++++... ........... ...... .....+.......... .. .....+
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~ 153 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPG-LATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLF-AS---QKNLPP 153 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCC-cCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCcee-ee---cccCCh
Confidence 9999999999999999999999986422 11110000000 000000 0000000000000000 00 000000
Q ss_pred HHH---HHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeE
Q 024469 161 EFL---TIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEV 237 (267)
Q Consensus 161 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~ 237 (267)
... ........... ....+..... .............++|+++|+|++|..++ +..+.+.+..++.++
T Consensus 154 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~ 224 (251)
T TIGR03695 154 EQRQALRAKRLANNPEG---LAKMLRATGL-----GKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTL 224 (251)
T ss_pred HHhHHHHHhcccccchH---HHHHHHHhhh-----hcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcE
Confidence 000 00000000000 0000000000 00000000112247899999999998774 556677888899999
Q ss_pred EEecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 238 MEIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 238 ~~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
++++++||++++|+|+++++.|.+|++
T Consensus 225 ~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 225 VIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred EEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 999999999999999999999999873
No 30
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=4e-29 Score=217.23 Aligned_cols=248 Identities=13% Similarity=0.119 Sum_probs=149.3
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC-----cccChHHhhHHHHHHHHcCC---CCCc
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-----DVHTFHAYSEPLMEVLASLP---AEEK 79 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-----~~~~~~~~~~~l~~~i~~l~---~~~~ 79 (267)
++++|||+||++.+...|..++..|.+.||+|+++|+||||.|+++.. ..++++++++++.++++.+. ...+
T Consensus 53 ~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 132 (330)
T PRK10749 53 HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRK 132 (330)
T ss_pred CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCC
Confidence 357899999999998899999988888899999999999999975321 23589999999999998751 2368
Q ss_pred EEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCccccc-ccccccCCCCCCccce--
Q 024469 80 VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLD-TQFSQCDASNPSHISM-- 156 (267)
Q Consensus 80 vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-- 156 (267)
++|+||||||.+++.+|.++|++|+++|+++|........+......+..... ....... ...........+....
T Consensus 133 ~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 211 (330)
T PRK10749 133 RYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAE-GHPRIRDGYAIGTGRWRPLPFAINVL 211 (330)
T ss_pred eEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHH-HhcCCCCcCCCCCCCCCCCCcCCCCC
Confidence 99999999999999999999999999999987532111111111111110000 0000000 0000000000000000
Q ss_pred eechHHH---HHHHhcCCCh----HHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHH
Q 024469 157 LFGREFL---TIKIYQLCPP----EDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMI 229 (267)
Q Consensus 157 ~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~ 229 (267)
...++.. .+.+...... ....+....... ...+ .......++|+++|+|++|++++++.++.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~ 282 (330)
T PRK10749 212 THSRERYRRNLRFYADDPELRVGGPTYHWVRESILA----GEQV-----LAGAGDITTPLLLLQAEEERVVDNRMHDRFC 282 (330)
T ss_pred CCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHH----HHHH-----HhhccCCCCCEEEEEeCCCeeeCHHHHHHHH
Confidence 0001110 0111000000 000000000000 0000 0011223789999999999999999888777
Q ss_pred HcC-------CCCeEEEecCCCCCCCCCCc---HHHHHHHHHHHHh
Q 024469 230 QNY-------PVNEVMEIKGGDHMAMLSDP---QKLCDCLSQISLK 265 (267)
Q Consensus 230 ~~~-------p~~~~~~i~~~gH~~~~e~p---~~~~~~l~~f~~~ 265 (267)
+.+ ++++++++++|||+++.|++ +++.+.|.+|+.+
T Consensus 283 ~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 283 EARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred HHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 644 45589999999999999987 5577778888865
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=6.6e-29 Score=209.63 Aligned_cols=244 Identities=18% Similarity=0.194 Sum_probs=147.3
Q ss_pred cceEEEecCCCCCh-hchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCc--ccChHHhhHHHHHHHHcCCCCCcEEEEee
Q 024469 9 EKHFVLVHGVNHGA-WCWYKLKARLVAGGHRVTAVDLAASGINMKRIED--VHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (267)
Q Consensus 9 ~~~ivlvHG~~~~~-~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~--~~~~~~~~~~l~~~i~~l~~~~~vilvGH 85 (267)
++||||+||++.++ ..|..+...|.+.||+|+++|+||||.|+.+... .++++++++++.++++++ ..++++|+||
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~liG~ 103 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL-GLDKFYLLGH 103 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc-CCCcEEEEEe
Confidence 57999999986555 4566677777655899999999999999864332 378999999999999998 5578999999
Q ss_pred ChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccc--cccccCCCCCCccceeechHHH
Q 024469 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDT--QFSQCDASNPSHISMLFGREFL 163 (267)
Q Consensus 86 SmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 163 (267)
||||.++..+|.++|++|.++|++++...... ............ + ..+... ....... ...+. + ...+
T Consensus 104 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~-~~~~~---~-~~~~ 173 (288)
T TIGR01250 104 SWGGMLAQEYALKYGQHLKGLIISSMLDSAPE--YVKELNRLRKEL--P-PEVRAAIKRCEASGD-YDNPE---Y-QEAV 173 (288)
T ss_pred ehHHHHHHHHHHhCccccceeeEecccccchH--HHHHHHHHHhhc--C-hhHHHHHHHHHhccC-cchHH---H-HHHH
Confidence 99999999999999999999999986432110 000000111000 0 000000 0000000 00000 0 0000
Q ss_pred HHHH----hcC-CChHHHHHHH---------HhcCCCccccccccccccC-CccCCCCccEEEEEeCCCccCChHHHHHH
Q 024469 164 TIKI----YQL-CPPEDLELAK---------MLVRPGSMFIDNLSKESKF-SDEGYGSVKRVYLVCEEDIGLPKQFQHWM 228 (267)
Q Consensus 164 ~~~~----~~~-~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~iP~l~i~g~~D~~~~~~~~~~~ 228 (267)
.... ... .......... .+................. ......++|+++++|++|.+ +++..+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~ 252 (288)
T TIGR01250 174 EVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREM 252 (288)
T ss_pred HHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHH
Confidence 0000 000 0000000000 0000000000000000000 01122478999999999985 56777888
Q ss_pred HHcCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 229 IQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 229 ~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
.+..++.++++++++||++++|+|++|++.|.+|++
T Consensus 253 ~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 253 QELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 888899999999999999999999999999999974
No 32
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=5.9e-29 Score=207.88 Aligned_cols=246 Identities=19% Similarity=0.249 Sum_probs=150.3
Q ss_pred CccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCC---CcccChHHhhHHHHHHHHcCCCCCcEEEE
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI---EDVHTFHAYSEPLMEVLASLPAEEKVILV 83 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~---~~~~~~~~~~~~l~~~i~~l~~~~~vilv 83 (267)
..++|+|||||++++...|-..++.|+. .++|+|+||||+|+|+++. +.......+++-+.++-.+. +.++-+||
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~-~L~Kmilv 165 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKM-GLEKMILV 165 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHc-CCcceeEe
Confidence 3468999999999999999999999976 6899999999999999763 22234557888888888888 67899999
Q ss_pred eeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccc------------cccccCCCCC
Q 024469 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDT------------QFSQCDASNP 151 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 151 (267)
||||||.++..||.+||++|.+|||++|+.-..... ...+ +.+ +...|+.. .++..++ --
T Consensus 166 GHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~--~~~~-~~~----~~~~w~~~~~~~~~~~nPl~~LR~~Gp-~G 237 (365)
T KOG4409|consen 166 GHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPD--SEPE-FTK----PPPEWYKALFLVATNFNPLALLRLMGP-LG 237 (365)
T ss_pred eccchHHHHHHHHHhChHhhceEEEecccccccCCC--cchh-hcC----CChHHHhhhhhhhhcCCHHHHHHhccc-cc
Confidence 999999999999999999999999999864221100 0000 000 01111100 0011010 00
Q ss_pred Cccceee------------chHHHHHHHhc--CCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCC
Q 024469 152 SHISMLF------------GREFLTIKIYQ--LCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEED 217 (267)
Q Consensus 152 ~~~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D 217 (267)
+.....+ ..+++-++++. ...+........+..+....-+.+.+. +. ..-.++|+++|+|++|
T Consensus 238 p~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r--~~-~l~~~~pv~fiyG~~d 314 (365)
T KOG4409|consen 238 PKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQR--LR-ELKKDVPVTFIYGDRD 314 (365)
T ss_pred hHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHH--HH-hhccCCCEEEEecCcc
Confidence 0000000 11111122111 111111111122221111100001110 00 1112699999999999
Q ss_pred ccCChHHHHHHHH--cCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHHhh
Q 024469 218 IGLPKQFQHWMIQ--NYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLKY 266 (267)
Q Consensus 218 ~~~~~~~~~~~~~--~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~~ 266 (267)
-+.-.. ..++.+ ....++.++|+++||.+++|+|+.||+.|..+++++
T Consensus 315 WmD~~~-g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 315 WMDKNA-GLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred cccchh-HHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 875433 333333 334678999999999999999999999999998764
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=4.7e-28 Score=215.26 Aligned_cols=104 Identities=22% Similarity=0.256 Sum_probs=86.6
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccC----hHHhhHHHHHHHHcCCCCCcEEEE
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHT----FHAYSEPLMEVLASLPAEEKVILV 83 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~----~~~~~~~l~~~i~~l~~~~~vilv 83 (267)
++++|||+||++.+...|..+++.|++ +|+|+++|+||||.|+++.....+ .+.+++++.++++.+ +.++++|+
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l-~~~~~~lv 181 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK-NLSNFILL 181 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc-CCCCeEEE
Confidence 358999999999999999989999976 599999999999999865321112 123567788888888 55799999
Q ss_pred eeChhhHHHHHHhhhCCCccceEEEEeccC
Q 024469 84 GHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
||||||.+++.+|.++|++|.++|++++..
T Consensus 182 GhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 182 GHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred EECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 999999999999999999999999998753
No 34
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=1.7e-28 Score=216.96 Aligned_cols=249 Identities=13% Similarity=0.142 Sum_probs=145.8
Q ss_pred cceEEEecCCCCChhc-------------hHHHHH---HHhcCCCeEEEeCCCCC-CCCCCCC----C---------ccc
Q 024469 9 EKHFVLVHGVNHGAWC-------------WYKLKA---RLVAGGHRVTAVDLAAS-GINMKRI----E---------DVH 58 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~-------------w~~~~~---~L~~~g~~via~Dl~G~-G~S~~~~----~---------~~~ 58 (267)
+++|||+||++.+... |..++. .|-..+|+||++|++|+ |.|+.+. . ..|
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 5899999999988874 667652 33235799999999993 4443211 0 147
Q ss_pred ChHHhhHHHHHHHHcCCCCCc-EEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcc
Q 024469 59 TFHAYSEPLMEVLASLPAEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDS 137 (267)
Q Consensus 59 ~~~~~~~~l~~~i~~l~~~~~-vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (267)
+++++++++.++++++ +.++ ++||||||||++++.+|.++|++|+++|++++........ ....+....... ....
T Consensus 128 ~~~~~~~~~~~~l~~l-~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~i~-~~~~ 204 (379)
T PRK00175 128 TIRDWVRAQARLLDAL-GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQN-IAFNEVARQAIL-ADPD 204 (379)
T ss_pred CHHHHHHHHHHHHHHh-CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHH-HHHHHHHHHHHH-hCCC
Confidence 9999999999999999 5577 5999999999999999999999999999999754321110 000000000000 0000
Q ss_pred cccccc-----------------------------cccCCCCCCccc-eeec-----hHHHH----HHHhcCCChHHHHH
Q 024469 138 WLDTQF-----------------------------SQCDASNPSHIS-MLFG-----REFLT----IKIYQLCPPEDLEL 178 (267)
Q Consensus 138 ~~~~~~-----------------------------~~~~~~~~~~~~-~~~~-----~~~~~----~~~~~~~~~~~~~~ 178 (267)
|....+ ..+......+.. ..+. ..+.. .......+......
T Consensus 205 ~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~ 284 (379)
T PRK00175 205 WHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYL 284 (379)
T ss_pred CCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHH
Confidence 000000 000000000000 0000 00000 00000000000000
Q ss_pred HHHhcCCCccc-c-ccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCC----eEEEec-CCCCCCCCCC
Q 024469 179 AKMLVRPGSMF-I-DNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVN----EVMEIK-GGDHMAMLSD 251 (267)
Q Consensus 179 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~----~~~~i~-~~gH~~~~e~ 251 (267)
...+....... . .++. ......++|+++|+|++|.++|++..+++++.+|++ ++++++ +|||++++|+
T Consensus 285 ~~~~~~~d~~~~~~~d~~-----~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~ 359 (379)
T PRK00175 285 TRALDYFDPARGRGGDLA-----AALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLD 359 (379)
T ss_pred HHHHHhccccCCCCCCHH-----HHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcC
Confidence 00000000000 0 0000 001223789999999999999999999999999887 677774 8999999999
Q ss_pred cHHHHHHHHHHHHh
Q 024469 252 PQKLCDCLSQISLK 265 (267)
Q Consensus 252 p~~~~~~l~~f~~~ 265 (267)
|++|++.|.+|+++
T Consensus 360 p~~~~~~L~~FL~~ 373 (379)
T PRK00175 360 DPRYGRLVRAFLER 373 (379)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999975
No 35
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=1.5e-28 Score=215.31 Aligned_cols=249 Identities=14% Similarity=0.130 Sum_probs=145.8
Q ss_pred cceEEEecCCCCChh-----------chHHHHH---HHhcCCCeEEEeCCCC--CCCCCCC----C-------CcccChH
Q 024469 9 EKHFVLVHGVNHGAW-----------CWYKLKA---RLVAGGHRVTAVDLAA--SGINMKR----I-------EDVHTFH 61 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~-----------~w~~~~~---~L~~~g~~via~Dl~G--~G~S~~~----~-------~~~~~~~ 61 (267)
+++|||+||++.++. .|..++. .|...+|+||++|+|| ||.|... . ...++++
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 579999999988652 4777762 4435679999999999 5655421 1 1147999
Q ss_pred HhhHHHHHHHHcCCCCCc-EEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCccccc
Q 024469 62 AYSEPLMEVLASLPAEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLD 140 (267)
Q Consensus 62 ~~~~~l~~~i~~l~~~~~-vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (267)
++++++.++++++ +.++ ++||||||||++++.+|.++|++|++||++++........ ............ ....|..
T Consensus 111 ~~~~~~~~~~~~l-~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~ 187 (351)
T TIGR01392 111 DDVKAQKLLLDHL-GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWC-IAFNEVQRQAIL-ADPNWND 187 (351)
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHH-HHHHHHHHHHHH-hCCCCCC
Confidence 9999999999999 5577 9999999999999999999999999999999753211100 000000000000 0000000
Q ss_pred ccccccCCCCCCccc-----------eeechHHHHHHHhcCCC--------------hHHH-HH-H-HHhcC--CCccc-
Q 024469 141 TQFSQCDASNPSHIS-----------MLFGREFLTIKIYQLCP--------------PEDL-EL-A-KMLVR--PGSMF- 189 (267)
Q Consensus 141 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--------------~~~~-~~-~-~~~~~--~~~~~- 189 (267)
..+.. ...+.. .....+.+...+..... .+.. .. . ....+ +....
T Consensus 188 g~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 263 (351)
T TIGR01392 188 GDYYE----DGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLY 263 (351)
T ss_pred CCCCC----CCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCcchHHH
Confidence 00000 000000 00000001111110000 0000 00 0 00000 00000
Q ss_pred -ccccccc------ccC-CccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEE-----EecCCCCCCCCCCcHHHH
Q 024469 190 -IDNLSKE------SKF-SDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVM-----EIKGGDHMAMLSDPQKLC 256 (267)
Q Consensus 190 -~~~~~~~------~~~-~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~-----~i~~~gH~~~~e~p~~~~ 256 (267)
...+... ..+ ......++|+++|+|++|.++|++..+.+++.+|+++++ ++++|||++++|+|++|+
T Consensus 264 ~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~ 343 (351)
T TIGR01392 264 LTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVE 343 (351)
T ss_pred HHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHH
Confidence 0000000 000 011123689999999999999999999999999988765 567899999999999999
Q ss_pred HHHHHHHH
Q 024469 257 DCLSQISL 264 (267)
Q Consensus 257 ~~l~~f~~ 264 (267)
+.|.+|++
T Consensus 344 ~~l~~FL~ 351 (351)
T TIGR01392 344 ELIRGFLR 351 (351)
T ss_pred HHHHHHhC
Confidence 99999974
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=9.2e-28 Score=211.56 Aligned_cols=236 Identities=20% Similarity=0.255 Sum_probs=149.6
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
++++|||+||++.+...|..+.+.|.. +|+|+++|+||||.|+... ..++++++++++.++++.+ +.++++|+||||
T Consensus 130 ~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~lvG~S~ 206 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAV-GAGSLDELAAAVLAFLDAL-GIERAHLVGHSM 206 (371)
T ss_pred CCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhc-CCccEEEEeech
Confidence 368999999999999999999999965 5999999999999996543 3469999999999999998 457899999999
Q ss_pred hhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcC-CCCcccccccccccCCCCCCccceeechHHHHHH
Q 024469 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMG-KEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (267)
Q Consensus 88 GG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (267)
||.++..+|.++|++|.++|++++......... .....+..... .....++...+. . + ......+....
T Consensus 207 Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~-~--~~~~~~~~~~~ 276 (371)
T PRK14875 207 GGAVALRLAARAPQRVASLTLIAPAGLGPEING-DYIDGFVAAESRRELKPVLELLFA------D-P--ALVTRQMVEDL 276 (371)
T ss_pred HHHHHHHHHHhCchheeEEEEECcCCcCcccch-hHHHHhhcccchhHHHHHHHHHhc------C-h--hhCCHHHHHHH
Confidence 999999999999999999999986432111110 00001100000 000001100000 0 0 00011111111
Q ss_pred HhcC--CC-hHHH-HHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecC
Q 024469 167 IYQL--CP-PEDL-ELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKG 242 (267)
Q Consensus 167 ~~~~--~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~ 242 (267)
.... .. .... ............. .+... .....++|+++++|++|.++|++..+.+ .+..+++++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~l~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~ 347 (371)
T PRK14875 277 LKYKRLDGVDDALRALADALFAGGRQR-VDLRD-----RLASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPG 347 (371)
T ss_pred HHHhccccHHHHHHHHHHHhccCcccc-hhHHH-----HHhcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCC
Confidence 1000 00 0000 0000101000000 00000 0112378999999999999998876533 34678999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHh
Q 024469 243 GDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 243 ~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
+||++++|+|+++++.|.+|+++
T Consensus 348 ~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 348 AGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCChhhhCHHHHHHHHHHHhcc
Confidence 99999999999999999999875
No 37
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=6.3e-27 Score=206.91 Aligned_cols=239 Identities=16% Similarity=0.133 Sum_probs=149.7
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC---CCCcEEEEe
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVILVG 84 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~vilvG 84 (267)
..++|||+||++.++..|..+++.|.++||+|+++|+||||.|+......++++.+++|+.++++.+. ...+++|+|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 34689999999999999999999998889999999999999998654445688899999999988773 124799999
Q ss_pred eChhhHHHHHHhhhCC---CccceEEEEeccCCCCCCChh-hhHHHHHhhcCCCCcccccccccccCCCCCCccceeech
Q 024469 85 HSLGGVTLALAADKFP---HKISVAVFVTAFMPDTTHRPS-FVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR 160 (267)
Q Consensus 85 HSmGG~i~~~~a~~~p---~~v~~lvli~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
|||||.+++.++. +| ++|.++|+.+|+.......+. .....+.... .+.+ ..... ..........+
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~---~p~~-----~~~~~-~~~~~~~s~~~ 284 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLV---APRF-----QFKGA-NKRGIPVSRDP 284 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHh---CCCC-----cccCc-ccccCCcCCCH
Confidence 9999999887764 55 489999999875421111110 0111111110 0000 00000 00000000011
Q ss_pred HHHHHHHhcCCC---hHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCC--CC
Q 024469 161 EFLTIKIYQLCP---PEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP--VN 235 (267)
Q Consensus 161 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p--~~ 235 (267)
............ ...........+. .+.+.. .....++|+++++|++|.++|++.++.+.+..+ ..
T Consensus 285 ~~~~~~~~dp~~~~g~i~~~~~~~~~~~----~~~l~~-----~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k 355 (395)
T PLN02652 285 AALLAKYSDPLVYTGPIRVRTGHEILRI----SSYLTR-----NFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHK 355 (395)
T ss_pred HHHHHHhcCCCcccCCchHHHHHHHHHH----HHHHHh-----hcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCc
Confidence 111111100000 0000000000000 000000 011237899999999999999999998877654 46
Q ss_pred eEEEecCCCCCCCCC-CcHHHHHHHHHHHHh
Q 024469 236 EVMEIKGGDHMAMLS-DPQKLCDCLSQISLK 265 (267)
Q Consensus 236 ~~~~i~~~gH~~~~e-~p~~~~~~l~~f~~~ 265 (267)
+++++++++|.+++| +++++++.|.+|+++
T Consensus 356 ~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 356 DIKLYDGFLHDLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred eEEEECCCeEEeccCCCHHHHHHHHHHHHHH
Confidence 899999999999887 789999999999975
No 38
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.95 E-value=6.8e-27 Score=236.42 Aligned_cols=239 Identities=18% Similarity=0.221 Sum_probs=148.7
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCC-------CcccChHHhhHHHHHHHHcCCCCCcEE
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI-------EDVHTFHAYSEPLMEVLASLPAEEKVI 81 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~l~~~~~vi 81 (267)
+++|||+||++.++..|..+++.|.+ +|+|+++|+||||.|+... ...++++++++++.++++++ ..++++
T Consensus 1371 ~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l-~~~~v~ 1448 (1655)
T PLN02980 1371 GSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI-TPGKVT 1448 (1655)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh-CCCCEE
Confidence 58999999999999999999999965 5999999999999987532 12468999999999999998 558999
Q ss_pred EEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHH-----HhhcC-CCCcccccccccccCCCCCCccc
Q 024469 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQY-----SEKMG-KEDDSWLDTQFSQCDASNPSHIS 155 (267)
Q Consensus 82 lvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 155 (267)
||||||||.+++.+|.++|++|+++|++++... ............ ..... .....+... ++.. .... .
T Consensus 1449 LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~~~~-~~~~-~ 1522 (1655)
T PLN02980 1449 LVGYSMGARIALYMALRFSDKIEGAVIISGSPG-LKDEVARKIRSAKDDSRARMLIDHGLEIFLEN---WYSG-ELWK-S 1522 (1655)
T ss_pred EEEECHHHHHHHHHHHhChHhhCEEEEECCCCc-cCchHHHHHHhhhhhHHHHHHHhhhHHHHHHH---hccH-HHhh-h
Confidence 999999999999999999999999999986421 111100000000 00000 000000000 0000 0000 0
Q ss_pred eeechHH---HHHHHhcCCChHHHHHHHHhcCCCccccccccccccC-CccCCCCccEEEEEeCCCccCChHHHHHHHHc
Q 024469 156 MLFGREF---LTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKF-SDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQN 231 (267)
Q Consensus 156 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~ 231 (267)
....+.+ +..................+. .. ....+ ......++|+++|+|++|.+++ +.++++.+.
T Consensus 1523 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~--------~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~ 1592 (1655)
T PLN02980 1523 LRNHPHFNKIVASRLLHKDVPSLAKLLSDLS-IG--------RQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYRE 1592 (1655)
T ss_pred hccCHHHHHHHHHHHhcCCHHHHHHHHHHhh-hc--------ccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHH
Confidence 0000000 000000000000000000000 00 00000 0112236899999999999875 556666666
Q ss_pred CCC------------CeEEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 232 YPV------------NEVMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 232 ~p~------------~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
+|+ ++++++++|||++++|+|++|++.|.+|+++
T Consensus 1593 i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1593 IGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred ccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 654 4799999999999999999999999999976
No 39
>PRK05855 short chain dehydrogenase; Validated
Probab=99.95 E-value=1.2e-26 Score=215.74 Aligned_cols=250 Identities=18% Similarity=0.163 Sum_probs=145.3
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCC-CcccChHHhhHHHHHHHHcCCCCCcEEEEeeC
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI-EDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~-~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHS 86 (267)
.+++|||+||++.++..|+.+++.|+ .+|+|+++|+||||.|+.+. ...++++++++++.+++++++..++++|||||
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS 102 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHD 102 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence 36899999999999999999999994 57999999999999998543 23579999999999999998544469999999
Q ss_pred hhhHHHHHHhhh--CCCccceEEEEeccCCCCCCC---------hhhhHHHHHhhcCCCCcccccccccccCCCCCCccc
Q 024469 87 LGGVTLALAADK--FPHKISVAVFVTAFMPDTTHR---------PSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHIS 155 (267)
Q Consensus 87 mGG~i~~~~a~~--~p~~v~~lvli~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (267)
|||.+++.++.+ .++++..++.+++........ ............ ...+....... + ......
T Consensus 103 ~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~-~~~~~~ 176 (582)
T PRK05855 103 WGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQL---LRSWYIYLFHL--P-VLPELL 176 (582)
T ss_pred hHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHH---hhhHHHHHHhC--C-CCcHHH
Confidence 999988877655 345565555554321100000 000000000000 00000000000 0 000000
Q ss_pred -eeechHHHHHHHh--cCCChHHHHHHHHh--cCCC-ccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHH
Q 024469 156 -MLFGREFLTIKIY--QLCPPEDLELAKML--VRPG-SMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMI 229 (267)
Q Consensus 156 -~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~ 229 (267)
.......+..... .............. .... ..+................++|+++|+|++|.++|++.++.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~ 256 (582)
T PRK05855 177 WRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLS 256 (582)
T ss_pred hccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHHhcccc
Confidence 0000000000000 00000000000000 0000 0000000000000011234789999999999999999998888
Q ss_pred HcCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 230 QNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 230 ~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
+..|+.++++++ +||++++|+|+++++.|.+|+.+
T Consensus 257 ~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 257 RWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred ccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 888888888887 89999999999999999999976
No 40
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.95 E-value=1.1e-25 Score=192.02 Aligned_cols=242 Identities=17% Similarity=0.168 Sum_probs=151.5
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCC-CCCCcccChHHhhHHHHHHHHcCC---CCCcEEEEee
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINM-KRIEDVHTFHAYSEPLMEVLASLP---AEEKVILVGH 85 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~-~~~~~~~~~~~~~~~l~~~i~~l~---~~~~vilvGH 85 (267)
.+||++||...++..|..++..|...||.|+++|+||||.|. ...+...++++|.+|+.++++... ...+++|+||
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gH 114 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGH 114 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Confidence 689999999999999999999999999999999999999997 444455679999999999999873 3469999999
Q ss_pred ChhhHHHHHHhhhCCCccceEEEEeccCCCCC-CChhhhHHHHHhhcCCCCcccccccccccCCCCCCcc-ceeechHHH
Q 024469 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTT-HRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHI-SMLFGREFL 163 (267)
Q Consensus 86 SmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 163 (267)
||||.|+..++.+++.+|.++||.+|+..... ..............++..+.+....-. . .+... ....++...
T Consensus 115 SmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~--~~~~~~~~sr~~~~~ 190 (298)
T COG2267 115 SMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNL--L--EGVLTDDLSRDPAEV 190 (298)
T ss_pred CcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCccc--c--cCcCcchhhcCHHHH
Confidence 99999999999999999999999998754332 000001100000000000000000000 0 00000 000011111
Q ss_pred HHHHhcCCCh-H----HHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCC-hHHHHHHHHc--CCCC
Q 024469 164 TIKIYQLCPP-E----DLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLP-KQFQHWMIQN--YPVN 235 (267)
Q Consensus 164 ~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~-~~~~~~~~~~--~p~~ 235 (267)
+ .+..++. . ...+........ . ...........+|+++++|++|.+++ .+.+..+.+. .|..
T Consensus 191 ~--~~~~dP~~~~~~~~~~w~~~~~~a~-------~-~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~ 260 (298)
T COG2267 191 A--AYEADPLIGVGGPVSRWVDLALLAG-------R-VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDK 260 (298)
T ss_pred H--HHhcCCccccCCccHHHHHHHHHhh-------c-ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCc
Confidence 1 1111110 0 001111100000 0 00111122347899999999999999 5655544443 4677
Q ss_pred eEEEecCCCCCCCCCCcH---HHHHHHHHHHHh
Q 024469 236 EVMEIKGGDHMAMLSDPQ---KLCDCLSQISLK 265 (267)
Q Consensus 236 ~~~~i~~~gH~~~~e~p~---~~~~~l~~f~~~ 265 (267)
++++++|+.|.++.|.+. ++.+.+.+|+.+
T Consensus 261 ~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 261 ELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred eEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 899999999999998774 666777777765
No 41
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=8.1e-26 Score=194.52 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=86.2
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC-cccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
++||||+||++.++..| .+...+...+|+|+++|+||||.|+.+.. ..+++.++++++..+++.+ +.+++++|||||
T Consensus 27 ~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-~~~~~~lvG~S~ 104 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL-GIKNWLVFGGSW 104 (306)
T ss_pred CCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-CCCCEEEEEECH
Confidence 67999999987666544 34445545679999999999999985432 2467889999999999998 567999999999
Q ss_pred hhHHHHHHhhhCCCccceEEEEeccC
Q 024469 88 GGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 88 GG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
||.++..+|.++|++|.++|++++..
T Consensus 105 GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 105 GSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHChHhhhhheeecccc
Confidence 99999999999999999999998754
No 42
>PLN02511 hydrolase
Probab=99.93 E-value=5.7e-25 Score=194.77 Aligned_cols=242 Identities=13% Similarity=0.110 Sum_probs=137.7
Q ss_pred ccceEEEecCCCCChhc-h-HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCC---CCcEEE
Q 024469 8 EEKHFVLVHGVNHGAWC-W-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA---EEKVIL 82 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~-w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~---~~~vil 82 (267)
.+++|||+||++.++.. | +.++..+.+.||+|+++|+||||.|+......+ ...+++|+.++++.+.. ..++++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~-~~~~~~Dl~~~i~~l~~~~~~~~~~l 177 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFY-SASFTGDLRQVVDHVAGRYPSANLYA 177 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEE-cCCchHHHHHHHHHHHHHCCCCCEEE
Confidence 35789999999766543 5 445555657799999999999999975432222 35667777777777632 258999
Q ss_pred EeeChhhHHHHHHhhhCCCc--cceEEEEeccCCCCCC-----Ch-hhhHHH-HHhhcCCCCcccccccccccCCCCCCc
Q 024469 83 VGHSLGGVTLALAADKFPHK--ISVAVFVTAFMPDTTH-----RP-SFVLEQ-YSEKMGKEDDSWLDTQFSQCDASNPSH 153 (267)
Q Consensus 83 vGHSmGG~i~~~~a~~~p~~--v~~lvli~~~~~~~~~-----~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
|||||||.+++.++.++|++ |.++|++++....... .. ...... +.+.. ..........+. .. +
T Consensus 178 vG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l----~~~~~~~~~~~~--~~-~ 250 (388)
T PLN02511 178 AGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKAL----RKIFAKHALLFE--GL-G 250 (388)
T ss_pred EEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHH----HHHHHHHHHHHh--hC-C
Confidence 99999999999999999987 8888888742210000 00 000000 00000 000000000000 00 0
Q ss_pred cceeechHHHHHHHhcCCChHHHHHHHHhcCCCccc--ccc-ccccccCCccCCCCccEEEEEeCCCccCChHHH-HHHH
Q 024469 154 ISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMF--IDN-LSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQ-HWMI 229 (267)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~-~~~~ 229 (267)
..+.... ....... .+....+..+...+ .++ +............++|+++|+|++|+++|++.. ..++
T Consensus 251 --~~~~~~~----~~~~~~~--~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~ 322 (388)
T PLN02511 251 --GEYNIPL----VANAKTV--RDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDI 322 (388)
T ss_pred --CccCHHH----HHhCCCH--HHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHH
Confidence 0000000 0000000 00000010000000 000 000000111122478999999999999998755 4567
Q ss_pred HcCCCCeEEEecCCCCCCCCCCcHH------HHHHHHHHHHh
Q 024469 230 QNYPVNEVMEIKGGDHMAMLSDPQK------LCDCLSQISLK 265 (267)
Q Consensus 230 ~~~p~~~~~~i~~~gH~~~~e~p~~------~~~~l~~f~~~ 265 (267)
+.+|++++++++++||++++|+|+. +++.|.+|++.
T Consensus 323 ~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 323 KANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred hcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 7889999999999999999999987 48888888865
No 43
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.92 E-value=8.2e-24 Score=176.60 Aligned_cols=238 Identities=18% Similarity=0.239 Sum_probs=152.8
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcC-CCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC---CCCcEEEE
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVILV 83 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~-g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~vilv 83 (267)
..||++++||+..+...|+.+...|... +-+|+++|+|.||.|+.... ++-.++++|+..||+..+ ...+++|+
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~--h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~ 128 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV--HNYEAMAEDVKLFIDGVGGSTRLDPVVLL 128 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccc--cCHHHHHHHHHHHHHHcccccccCCceec
Confidence 4799999999999999999999999543 46899999999999986543 456899999999999884 24689999
Q ss_pred eeChhh-HHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHH
Q 024469 84 GHSLGG-VTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREF 162 (267)
Q Consensus 84 GHSmGG-~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
|||||| -+++..+...|+++.++|+++.. |............+...+ ... +. .. + . .-+.+.
T Consensus 129 GHsmGG~~~~m~~t~~~p~~~~rliv~D~s-P~~~~~~~~e~~e~i~~m--~~~---d~--------~~-~-~-~~~rke 191 (315)
T KOG2382|consen 129 GHSMGGVKVAMAETLKKPDLIERLIVEDIS-PGGVGRSYGEYRELIKAM--IQL---DL--------SI-G-V-SRGRKE 191 (315)
T ss_pred ccCcchHHHHHHHHHhcCcccceeEEEecC-CccCCcccchHHHHHHHH--Hhc---cc--------cc-c-c-cccHHH
Confidence 999999 44555577899999999999954 321111111111111111 000 00 00 0 0 001111
Q ss_pred HHHHHhcCCChHHH-HHHHHhcC--C-Cccc------------cccccccccCCc---cCCCCccEEEEEeCCCccCChH
Q 024469 163 LTIKIYQLCPPEDL-ELAKMLVR--P-GSMF------------IDNLSKESKFSD---EGYGSVKRVYLVCEEDIGLPKQ 223 (267)
Q Consensus 163 ~~~~~~~~~~~~~~-~~~~~~~~--~-~~~~------------~~~~~~~~~~~~---~~~~~iP~l~i~g~~D~~~~~~ 223 (267)
+...+.....+... ++...-++ . ...+ +..+. ...++. ......|++++.|.++..++.+
T Consensus 192 ~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~-~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~ 270 (315)
T KOG2382|consen 192 ALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYE-ILSYWADLEDGPYTGPVLFIKGLQSKFVPDE 270 (315)
T ss_pred HHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHH-hhcccccccccccccceeEEecCCCCCcChh
Confidence 11111111111111 11111111 0 0000 00000 001110 1222679999999999999999
Q ss_pred HHHHHHHcCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 224 FQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 224 ~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
.-.++.+..|..+++++++||||+|.|+|++|.+.|.+|+..
T Consensus 271 ~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 271 HYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred HHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 888999999999999999999999999999999999999853
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.92 E-value=3.2e-24 Score=186.35 Aligned_cols=236 Identities=11% Similarity=0.109 Sum_probs=142.6
Q ss_pred ccceEEEecCCCCChh-c------------------------h-HHHHHHHhcCCCeEEEeCCCCCCCCCCC---CCccc
Q 024469 8 EEKHFVLVHGVNHGAW-C------------------------W-YKLKARLVAGGHRVTAVDLAASGINMKR---IEDVH 58 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~-~------------------------w-~~~~~~L~~~g~~via~Dl~G~G~S~~~---~~~~~ 58 (267)
....||++||++.++. . | ..+++.|.+.||+|+++|+||||.|+.. .....
T Consensus 20 ~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~ 99 (332)
T TIGR01607 20 AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHIN 99 (332)
T ss_pred CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchh
Confidence 3569999999998885 1 1 3578899889999999999999998743 22234
Q ss_pred ChHHhhHHHHHHHHcCC----------------------C-CCcEEEEeeChhhHHHHHHhhhCCC--------ccceEE
Q 024469 59 TFHAYSEPLMEVLASLP----------------------A-EEKVILVGHSLGGVTLALAADKFPH--------KISVAV 107 (267)
Q Consensus 59 ~~~~~~~~l~~~i~~l~----------------------~-~~~vilvGHSmGG~i~~~~a~~~p~--------~v~~lv 107 (267)
+++++++|+.++++.+. . ..|++|+||||||+++..+++++++ .|.++|
T Consensus 100 ~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i 179 (332)
T TIGR01607 100 CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCI 179 (332)
T ss_pred hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEE
Confidence 89999999999998642 1 3589999999999999998876543 588999
Q ss_pred EEeccCCC-C-CC----ChhhhHHHHH---hhcCCCCcccccccccccCCCCCCccceeechHHHHHHHhcCC----ChH
Q 024469 108 FVTAFMPD-T-TH----RPSFVLEQYS---EKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLC----PPE 174 (267)
Q Consensus 108 li~~~~~~-~-~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 174 (267)
++++.... . .. ........+. ..+. +. +.. .. .......+. ..+....+. ...
T Consensus 180 ~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~---p~-----~~~----~~-~~~~~~~~~-~~~~~~~Dp~~~~~~~ 245 (332)
T TIGR01607 180 SLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVF---PT-----FRI----SK-KIRYEKSPY-VNDIIKFDKFRYDGGI 245 (332)
T ss_pred EeccceEEecccCCCcchhhhhHHHHHHHHHHHC---Cc-----ccc----cC-ccccccChh-hhhHHhcCccccCCcc
Confidence 88875311 0 10 0000011111 1110 00 000 00 000000011 111111100 000
Q ss_pred HHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcC--CCCeEEEecCCCCCCCCCC-
Q 024469 175 DLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY--PVNEVMEIKGGDHMAMLSD- 251 (267)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH~~~~e~- 251 (267)
...+...+.... ..+.. ... ....++|+++|+|++|.+++++.++.+.+.. ++.+++++++++|.++.|.
T Consensus 246 s~~~~~~l~~~~----~~~~~--~~~-~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~ 318 (332)
T TIGR01607 246 TFNLASELIKAT----DTLDC--DID-YIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPG 318 (332)
T ss_pred cHHHHHHHHHHH----HHHHh--hHh-hCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCC
Confidence 011111111000 00000 000 0112689999999999999999998876654 5778999999999999986
Q ss_pred cHHHHHHHHHHHH
Q 024469 252 PQKLCDCLSQISL 264 (267)
Q Consensus 252 p~~~~~~l~~f~~ 264 (267)
++++.+.|.+|+.
T Consensus 319 ~~~v~~~i~~wL~ 331 (332)
T TIGR01607 319 NEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHHHHhh
Confidence 5889999999875
No 45
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.92 E-value=9.3e-24 Score=173.76 Aligned_cols=240 Identities=17% Similarity=0.132 Sum_probs=152.2
Q ss_pred cceEEEecCCCCC-hhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC-----CCCCcEEE
Q 024469 9 EKHFVLVHGVNHG-AWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-----PAEEKVIL 82 (267)
Q Consensus 9 ~~~ivlvHG~~~~-~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l-----~~~~~vil 82 (267)
...|+++||++.+ ++.|+.++.+|+..||-|+++|++|||.|+.......+++..++|+.++.+.. ..+.++.|
T Consensus 54 r~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL 133 (313)
T KOG1455|consen 54 RGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFL 133 (313)
T ss_pred ceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeee
Confidence 3589999999855 48999999999999999999999999999976556679999999999998853 13458999
Q ss_pred EeeChhhHHHHHHhhhCCCccceEEEEeccCCCCC-CChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechH
Q 024469 83 VGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTT-HRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (267)
Q Consensus 83 vGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (267)
.||||||+|++.++.+.|+...++|+++|+.+... ..+......+...+....+.|... + .+-.....+...
T Consensus 134 ~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~v------p-~~d~~~~~~kdp 206 (313)
T KOG1455|consen 134 FGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIV------P-TKDIIDVAFKDP 206 (313)
T ss_pred eecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeec------C-CccccccccCCH
Confidence 99999999999999999999999999998654322 112212221111110012333210 1 000001111111
Q ss_pred HHHHHHhcCC-ChH-H--HHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcC--CCC
Q 024469 162 FLTIKIYQLC-PPE-D--LELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY--PVN 235 (267)
Q Consensus 162 ~~~~~~~~~~-~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~--p~~ 235 (267)
..+.....+. -.. . ..-+..+++... ++... .....+|.++++|++|.++.++.++.+.+.. .+.
T Consensus 207 ~~r~~~~~npl~y~g~pRl~T~~ElLr~~~----~le~~-----l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DK 277 (313)
T KOG1455|consen 207 EKRKILRSDPLCYTGKPRLKTAYELLRVTA----DLEKN-----LNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDK 277 (313)
T ss_pred HHHHHhhcCCceecCCccHHHHHHHHHHHH----HHHHh-----cccccccEEEEecCCCcccCcHHHHHHHHhccCCCC
Confidence 1122211111 000 0 010111111111 11111 1123789999999999999999999888765 477
Q ss_pred eEEEecCCCCCCCC-CCcHHHHHH---HHHHHH
Q 024469 236 EVMEIKGGDHMAML-SDPQKLCDC---LSQISL 264 (267)
Q Consensus 236 ~~~~i~~~gH~~~~-e~p~~~~~~---l~~f~~ 264 (267)
++.++||.-|.++. |-++.+.-+ |.+|+.
T Consensus 278 TlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~ 310 (313)
T KOG1455|consen 278 TLKLYPGMWHSLLSGEPDENVEIVFGDIISWLD 310 (313)
T ss_pred ceeccccHHHHhhcCCCchhHHHHHHHHHHHHH
Confidence 89999999999997 555554433 344443
No 46
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.89 E-value=2e-21 Score=173.16 Aligned_cols=212 Identities=14% Similarity=0.131 Sum_probs=136.3
Q ss_pred eEEEecCCCCC--hhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC--CCCcEEEEeeC
Q 024469 11 HFVLVHGVNHG--AWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILVGHS 86 (267)
Q Consensus 11 ~ivlvHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~vilvGHS 86 (267)
|+|++||...+ ...|..+.+.|+++||+|+++|+||||.|.... ...+...+...+.+.+.... ..+++.++|||
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~-~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S 273 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK-LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFR 273 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-ccccHHHHHHHHHHHHHhCcccCcccEEEEEEC
Confidence 45555554444 357888899999999999999999999986532 12345555667777777653 23689999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHH
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (267)
|||.++..+|...|++|+++|++++......... ...... .... ...+...
T Consensus 274 ~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~-----~~~~~~----p~~~--------------------~~~la~~ 324 (414)
T PRK05077 274 FGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDP-----KRQQQV----PEMY--------------------LDVLASR 324 (414)
T ss_pred hHHHHHHHHHHhCCcCceEEEEECCccchhhcch-----hhhhhc----hHHH--------------------HHHHHHH
Confidence 9999999999999999999999987532110000 000000 0000 0000000
Q ss_pred Hh-cCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCC
Q 024469 167 IY-QLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 245 (267)
Q Consensus 167 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH 245 (267)
+. .....+ .+...+... . +.....+ ....++|+++|+|++|.++|++.++.+.+..|+.++++++++
T Consensus 325 lg~~~~~~~--~l~~~l~~~-s-----l~~~~~l--~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~-- 392 (414)
T PRK05077 325 LGMHDASDE--ALRVELNRY-S-----LKVQGLL--GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK-- 392 (414)
T ss_pred hCCCCCChH--HHHHHhhhc-c-----chhhhhh--ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC--
Confidence 00 000000 011111000 0 0000000 011378999999999999999999988888999999999976
Q ss_pred CCCCCCcHHHHHHHHHHHHh
Q 024469 246 MAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 246 ~~~~e~p~~~~~~l~~f~~~ 265 (267)
++.+.++++++.+.+|+++
T Consensus 393 -~~~e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 393 -PVYRNFDKALQEISDWLED 411 (414)
T ss_pred -CccCCHHHHHHHHHHHHHH
Confidence 6779999999999999976
No 47
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.89 E-value=5e-22 Score=175.16 Aligned_cols=254 Identities=15% Similarity=0.166 Sum_probs=144.6
Q ss_pred cceEEEecCCCCCh------------hc-hHHHHH---HHhcCCCeEEEeCCCCCCCCCC------------CC------
Q 024469 9 EKHFVLVHGVNHGA------------WC-WYKLKA---RLVAGGHRVTAVDLAASGINMK------------RI------ 54 (267)
Q Consensus 9 ~~~ivlvHG~~~~~------------~~-w~~~~~---~L~~~g~~via~Dl~G~G~S~~------------~~------ 54 (267)
.+.||++|++..++ .. |..++- .|.-..|.||++|..|-|.|.. +.
T Consensus 56 ~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~ 135 (389)
T PRK06765 56 SNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYG 135 (389)
T ss_pred CCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccC
Confidence 47899999997643 12 544432 1323469999999999765211 10
Q ss_pred --CcccChHHhhHHHHHHHHcCCCCCcEE-EEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhc
Q 024469 55 --EDVHTFHAYSEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKM 131 (267)
Q Consensus 55 --~~~~~~~~~~~~l~~~i~~l~~~~~vi-lvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 131 (267)
-..+|+.++++++.++++++ +.+++. ||||||||++++.+|.++|++|+++|++++.............+.....+
T Consensus 136 ~~fP~~t~~d~~~~~~~ll~~l-gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai 214 (389)
T PRK06765 136 MDFPVVTILDFVRVQKELIKSL-GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAI 214 (389)
T ss_pred CCCCcCcHHHHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHH
Confidence 12369999999999999999 567875 99999999999999999999999999999754322111001111111101
Q ss_pred CCCCcccccccccccCCCCCCc-c-------ceeechHHHHHHHhcCC--------------ChHH-HH-HHHHhc-CC-
Q 024469 132 GKEDDSWLDTQFSQCDASNPSH-I-------SMLFGREFLTIKIYQLC--------------PPED-LE-LAKMLV-RP- 185 (267)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~--------------~~~~-~~-~~~~~~-~~- 185 (267)
. ..+.|.+-.+....+ .... . ...+.++++.+.+.... ..+. .. ....+. +.
T Consensus 215 ~-~dp~~~~G~y~~~~~-p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~D 292 (389)
T PRK06765 215 R-LDPNWKGGKYYGEEQ-PMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVD 292 (389)
T ss_pred H-hCCCCCCCCCCCCCC-chHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccC
Confidence 0 001121111100000 0000 0 00011122221111100 0000 00 000000 00
Q ss_pred -Cccc-------cccccccc-cCC-ccCCCCccEEEEEeCCCccCChHHHHHHHHcCC----CCeEEEecC-CCCCCCCC
Q 024469 186 -GSMF-------IDNLSKES-KFS-DEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP----VNEVMEIKG-GDHMAMLS 250 (267)
Q Consensus 186 -~~~~-------~~~~~~~~-~~~-~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p----~~~~~~i~~-~gH~~~~e 250 (267)
.... ..++.... .+. .....++|+++|+|++|.++|++.++++.+.+| +++++++++ +||++++|
T Consensus 293 an~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le 372 (389)
T PRK06765 293 ANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVF 372 (389)
T ss_pred hhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhc
Confidence 0000 00000000 000 011237899999999999999999998888775 578999985 99999999
Q ss_pred CcHHHHHHHHHHHHh
Q 024469 251 DPQKLCDCLSQISLK 265 (267)
Q Consensus 251 ~p~~~~~~l~~f~~~ 265 (267)
+|++|++.|.+|+++
T Consensus 373 ~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 373 DIHLFEKKIYEFLNR 387 (389)
T ss_pred CHHHHHHHHHHHHcc
Confidence 999999999999864
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.89 E-value=6.3e-22 Score=167.68 Aligned_cols=230 Identities=13% Similarity=0.097 Sum_probs=131.6
Q ss_pred cceEEEecCCCC----ChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC----CCCcE
Q 024469 9 EKHFVLVHGVNH----GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP----AEEKV 80 (267)
Q Consensus 9 ~~~ivlvHG~~~----~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~v 80 (267)
+++||++||.+. +...|..+++.|+++||+|+++|+||||.|+.. .+++.++.+|+.++++.+. +.+++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~---~~~~~~~~~d~~~~~~~l~~~~~g~~~i 102 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE---NLGFEGIDADIAAAIDAFREAAPHLRRI 102 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC---CCCHHHHHHHHHHHHHHHHhhCCCCCcE
Confidence 568888888753 223466778999888999999999999998743 2466777788888777662 23579
Q ss_pred EEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHH-HHhhcCCCCcccccccccccCCCCCCccceeec
Q 024469 81 ILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQ-YSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG 159 (267)
Q Consensus 81 ilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
+|+||||||.+++.+|.. +.+|+++|+++++.............. +.... .....| ... ..+ ...+
T Consensus 103 ~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~--~~g-------~~~~- 169 (274)
T TIGR03100 103 VAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQL-LSADFW-RKL--LSG-------EVNL- 169 (274)
T ss_pred EEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHH-hChHHH-HHh--cCC-------CccH-
Confidence 999999999998888754 578999999998643221111111111 11100 000000 000 000 0000
Q ss_pred hHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHH------HHHHHcC-
Q 024469 160 REFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQ------HWMIQNY- 232 (267)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~------~~~~~~~- 232 (267)
.+....... ....... ......... ..... .......++|+++++|.+|...+ ... ++..+..
T Consensus 170 ~~~~~~~~~------~~~~~~~-~~~~~~~~~-~~~~~-~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~ 239 (274)
T TIGR03100 170 GSSLRGLGD------ALLKARQ-KGDEVAHGG-LAERM-KAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALE 239 (274)
T ss_pred HHHHHHHHH------HHHhhhh-cCCCcccch-HHHHH-HHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhh
Confidence 000000000 0000000 000000000 00000 00011127899999999999864 322 3333333
Q ss_pred -CCCeEEEecCCCCCCCCCCc-HHHHHHHHHHHH
Q 024469 233 -PVNEVMEIKGGDHMAMLSDP-QKLCDCLSQISL 264 (267)
Q Consensus 233 -p~~~~~~i~~~gH~~~~e~p-~~~~~~l~~f~~ 264 (267)
++.+++.+++++|++..|++ +++++.|.+|++
T Consensus 240 ~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 240 DPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred cCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 78899999999999966666 999999999985
No 49
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.89 E-value=7e-23 Score=165.99 Aligned_cols=232 Identities=19% Similarity=0.212 Sum_probs=140.0
Q ss_pred CccceEEEecCCCCChhchHHHHHHHhcC-CCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC--CCCcEEEE
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILV 83 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~L~~~-g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~vilv 83 (267)
+.||.++|+||.++++-+|..+...|... ..||+|+||||||.|.-...+..+.++++.|+.++++.+- ...+++||
T Consensus 72 t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilV 151 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILV 151 (343)
T ss_pred CCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 46889999999999999999999999643 3588999999999987543345799999999999999883 23579999
Q ss_pred eeChhhHHHHHHh--hhCCCccceEEEEeccCCCCCCChh--hhHHHHHhhcCCCC------cccccccccccCCCCCCc
Q 024469 84 GHSLGGVTLALAA--DKFPHKISVAVFVTAFMPDTTHRPS--FVLEQYSEKMGKED------DSWLDTQFSQCDASNPSH 153 (267)
Q Consensus 84 GHSmGG~i~~~~a--~~~p~~v~~lvli~~~~~~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 153 (267)
||||||.|+.+.| ...|. +.+|++|+-+ - +.... ..++.+.++..+.+ ..|.-.. +. .+.+
T Consensus 152 GHSmGGaIav~~a~~k~lps-l~Gl~viDVV-E--gtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~s----g~-~Rn~ 222 (343)
T KOG2564|consen 152 GHSMGGAIAVHTAASKTLPS-LAGLVVIDVV-E--GTAMEALNSMQHFLRNRPKSFKSIEDAIEWHVRS----GQ-LRNR 222 (343)
T ss_pred eccccchhhhhhhhhhhchh-hhceEEEEEe-c--hHHHHHHHHHHHHHhcCCccccchhhHHHHHhcc----cc-cccc
Confidence 9999999887764 34577 8999999953 1 11111 11223333220000 0110000 00 0000
Q ss_pred cceee-chHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCcc-------CC--CCccEEEEEeCCCccCChH
Q 024469 154 ISMLF-GREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDE-------GY--GSVKRVYLVCEEDIGLPKQ 223 (267)
Q Consensus 154 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~iP~l~i~g~~D~~~~~~ 223 (267)
.++.. -|..+. +. . +. +. -.+..++....+++.. .+ ..+|+++|....|++...-
T Consensus 223 ~SArVsmP~~~~----~~-~-eG--------h~-yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdL 287 (343)
T KOG2564|consen 223 DSARVSMPSQLK----QC-E-EG--------HC-YVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDKDL 287 (343)
T ss_pred ccceEecchhee----ec-c-CC--------Cc-EEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccCcce
Confidence 00000 010000 00 0 00 00 0011112111111111 11 1578999998888774432
Q ss_pred HHHHHHHcCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 224 FQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 224 ~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
... +.-..-++.+++.|||+.|.+.|.+++..+..|...
T Consensus 288 tiG---QMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~R 326 (343)
T KOG2564|consen 288 TIG---QMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIR 326 (343)
T ss_pred eee---eeccceeeeeecccCceeccCCcchHHHHHHHHHhh
Confidence 211 222334788999999999999999999999999865
No 50
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.88 E-value=1.3e-21 Score=153.92 Aligned_cols=222 Identities=16% Similarity=0.161 Sum_probs=145.6
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC--CCCcEEEEeeC
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILVGHS 86 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~vilvGHS 86 (267)
+..|+|||||..++.-.+.+.+.|.++||.|+||.+||||..+...- .++..++-+++.+.-+.|. +.+.+.++|-|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl-~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFL-KTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHh-cCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 57999999999999999999999999999999999999998753211 2466677666666655552 45789999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHH
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (267)
|||..++.+|.++| ++++|.+|+.+.....+ ...+.+.+ |........+ . +.+.+...
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~~~--~iie~~l~--------y~~~~kk~e~--k--------~~e~~~~e 151 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR--IIIEGLLE--------YFRNAKKYEG--K--------DQEQIDKE 151 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccccch--hhhHHHHH--------HHHHhhhccC--C--------CHHHHHHH
Confidence 99999999999998 88999999754321111 12222211 0000000000 0 11222221
Q ss_pred Hhc--CCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcC--CCCeEEEecC
Q 024469 167 IYQ--LCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY--PVNEVMEIKG 242 (267)
Q Consensus 167 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~--p~~~~~~i~~ 242 (267)
... ..+.........+++ +.. .+..-...|++++.|++|.++|.+.+..+-+.. ...++..+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~-------~~~-----~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~ 219 (243)
T COG1647 152 MKSYKDTPMTTTAQLKKLIK-------DAR-----RSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEG 219 (243)
T ss_pred HHHhhcchHHHHHHHHHHHH-------HHH-----hhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEcc
Confidence 111 111111111111111 100 011223679999999999999999998877654 3557999999
Q ss_pred CCCCCCCCCc-HHHHHHHHHHHHh
Q 024469 243 GDHMAMLSDP-QKLCDCLSQISLK 265 (267)
Q Consensus 243 ~gH~~~~e~p-~~~~~~l~~f~~~ 265 (267)
+||-+-++.- +.+.+.|..|+++
T Consensus 220 SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 220 SGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCceeecchhHHHHHHHHHHHhhC
Confidence 9999877554 8999999999863
No 51
>PRK11071 esterase YqiA; Provisional
Probab=99.88 E-value=6.8e-21 Score=152.59 Aligned_cols=184 Identities=16% Similarity=0.105 Sum_probs=123.8
Q ss_pred ceEEEecCCCCChhchHH--HHHHHhc--CCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEee
Q 024469 10 KHFVLVHGVNHGAWCWYK--LKARLVA--GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~--~~~~L~~--~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGH 85 (267)
|+|||+|||++++.+|+. +.+.|++ .+|+|+++|+|||| +++++++.++++++ ..++++||||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~-~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH-GGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc-CCCCeEEEEE
Confidence 589999999999999984 4566654 26999999999984 35778888999988 5579999999
Q ss_pred ChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHH
Q 024469 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTI 165 (267)
Q Consensus 86 SmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
||||.+++.+|.++|. ++|++++... +......+... .... .. .....++.+++.+
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~-----~~~~~~~~~~~-----------~~~~----~~-~~~~~~~~~~~~d 124 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVR-----PFELLTDYLGE-----------NENP----YT-GQQYVLESRHIYD 124 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCC-----HHHHHHHhcCC-----------cccc----cC-CCcEEEcHHHHHH
Confidence 9999999999999984 4688886422 11111111100 0000 00 0001111111110
Q ss_pred HHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCC
Q 024469 166 KIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 245 (267)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH 245 (267)
...+ .. .. .. .+.|+++|+|++|.++|++.+..+.+. +++++++|++|
T Consensus 125 -------------~~~~-~~--------~~------i~-~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH 172 (190)
T PRK11071 125 -------------LKVM-QI--------DP------LE-SPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNH 172 (190)
T ss_pred -------------HHhc-CC--------cc------CC-ChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCc
Confidence 0010 00 00 01 256789999999999999999877773 46778899999
Q ss_pred CCCCCCcHHHHHHHHHHHH
Q 024469 246 MAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 246 ~~~~e~p~~~~~~l~~f~~ 264 (267)
.. +..+++.+.+.+|++
T Consensus 173 ~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 173 AF--VGFERYFNQIVDFLG 189 (190)
T ss_pred ch--hhHHHhHHHHHHHhc
Confidence 98 555888888988874
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.88 E-value=8.2e-22 Score=170.92 Aligned_cols=230 Identities=15% Similarity=0.082 Sum_probs=120.0
Q ss_pred cceEEEecCCCCChhc--hHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCccc---ChHHhhHHHHHHHH-cCCCCCcEEE
Q 024469 9 EKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVH---TFHAYSEPLMEVLA-SLPAEEKVIL 82 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~--w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~---~~~~~~~~l~~~i~-~l~~~~~vil 82 (267)
.++||++||++.+... ++.+++.|.++||+|+++|+||||.++......+ ..+|... +.+.+. .+ +..++++
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~-~i~~l~~~~-~~~~~~~ 135 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARF-FLRWLQREF-GHVPTAA 135 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHH-HHHHHHHhC-CCCCEEE
Confidence 5799999999866443 4668888999999999999999997753211122 2233222 223333 34 4468999
Q ss_pred EeeChhhHHHHHHhhhCCCc--cceEEEEeccCCCCCCChhhhHHHHHhhcCCCCccccccccc--ccCCCCCCccceee
Q 024469 83 VGHSLGGVTLALAADKFPHK--ISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFS--QCDASNPSHISMLF 158 (267)
Q Consensus 83 vGHSmGG~i~~~~a~~~p~~--v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 158 (267)
|||||||.+++.++.++++. |.++|++++... ........+...... ...++...+. ........+.....
T Consensus 136 vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~--~~~~~~~~~~~~~~~---~~~~l~~~l~~~~~~~~~~~~~~~~~ 210 (324)
T PRK10985 136 VGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM--LEACSYRMEQGFSRV---YQRYLLNLLKANAARKLAAYPGTLPI 210 (324)
T ss_pred EEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC--HHHHHHHHhhhHHHH---HHHHHHHHHHHHHHHHHHhccccccC
Confidence 99999999878776666543 889999986321 100000000000000 0000000000 00000000000000
Q ss_pred chHHHHHHHhcCCChHHHHHHHHhcCCC---ccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCC
Q 024469 159 GREFLTIKIYQLCPPEDLELAKMLVRPG---SMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVN 235 (267)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~ 235 (267)
..+.+ ...... .+.......+. ....+.+............++|+++|+|++|++++++..+.+.+..|+.
T Consensus 211 ~~~~~----~~~~~~--~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~ 284 (324)
T PRK10985 211 NLAQL----KSVRRL--REFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNV 284 (324)
T ss_pred CHHHH----hcCCcH--HHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCe
Confidence 00000 000000 00000000000 0000000000001111223689999999999999998888777778888
Q ss_pred eEEEecCCCCCCCCCC
Q 024469 236 EVMEIKGGDHMAMLSD 251 (267)
Q Consensus 236 ~~~~i~~~gH~~~~e~ 251 (267)
++++++++||++++|.
T Consensus 285 ~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 285 EYQLTEHGGHVGFVGG 300 (324)
T ss_pred EEEECCCCCceeeCCC
Confidence 9999999999999985
No 53
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.88 E-value=4.8e-21 Score=173.70 Aligned_cols=237 Identities=18% Similarity=0.112 Sum_probs=135.7
Q ss_pred cceEEEecCCCCChhchH-----HHHHHHhcCCCeEEEeCCCCCCCCCCCCC-cccChHHhhHHHHHHHHcCCCCCcEEE
Q 024469 9 EKHFVLVHGVNHGAWCWY-----KLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVIL 82 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~-----~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~vil 82 (267)
++|||+|||+....++|. .++..|.++||+|+++|++|+|.|+.... +.|..+.+.+.|..+++.+ +.+++++
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~-g~~kv~l 266 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAIT-GEKQVNC 266 (532)
T ss_pred CCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhc-CCCCeEE
Confidence 689999999999999995 68999988999999999999998864321 2244444455566666666 5579999
Q ss_pred EeeChhhHHHH----HHhhhC-CCccceEEEEeccCCCCCCChh--------h--hHHHHHhhcCCCCcccccccccccC
Q 024469 83 VGHSLGGVTLA----LAADKF-PHKISVAVFVTAFMPDTTHRPS--------F--VLEQYSEKMGKEDDSWLDTQFSQCD 147 (267)
Q Consensus 83 vGHSmGG~i~~----~~a~~~-p~~v~~lvli~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (267)
|||||||.+++ .++... |++|++++++++...-. .... . ..++.....+......+...+....
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~-~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFS-DPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCC-CcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 99999998742 244444 88999999999753211 1100 0 0111111111000111111111000
Q ss_pred CCCCCccceeechHHHHHHH------------hcCC-C--hHH--HHHHHHhcCCCccccccccccccCCccCCCCccEE
Q 024469 148 ASNPSHISMLFGREFLTIKI------------YQLC-P--PED--LELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRV 210 (267)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~------------~~~~-~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l 210 (267)
+ . ..+...++...+ ++.+ . +.. .+..+.++.........+............++|++
T Consensus 346 p-~-----~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvL 419 (532)
T TIGR01838 346 E-N-----DLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVY 419 (532)
T ss_pred h-h-----hHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEE
Confidence 0 0 000000111111 1110 0 000 01111111111100000100000011223468999
Q ss_pred EEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCCCCCCCcH
Q 024469 211 YLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQ 253 (267)
Q Consensus 211 ~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~ 253 (267)
+|.|++|.++|++.+..+.+.+++.+.++++++||.++++.|.
T Consensus 420 vV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 420 IIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred EEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 9999999999999999988999988999999999999999985
No 54
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=2e-20 Score=154.09 Aligned_cols=246 Identities=19% Similarity=0.169 Sum_probs=138.3
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcC--CCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeC
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAG--GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~--g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHS 86 (267)
+++++++||++.+...|......+... .|+|+++|+||||.|. .. .++...+++++..+++.+ +..+++|+|||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 96 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDAL-GLEKVVLVGHS 96 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHh-CCCceEEEEec
Confidence 458999999999998887743444332 1899999999999996 11 235556689999999988 44679999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEeccCC-CCCCChh------hhHHHHHhhcCCCCcccccccccccCCCCCCccceeec
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTAFMP-DTTHRPS------FVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG 159 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
|||.++..++.++|+++.++|++++... ....... .......... ........ ..... .. .....+.
T Consensus 97 ~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~--~~-~~~~~~~ 170 (282)
T COG0596 97 MGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLL--LGLDAAAF-AALLA--AL-GLLAALA 170 (282)
T ss_pred ccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhh--hccchhhh-hhhhh--cc-ccccccc
Confidence 9999999999999999999999997532 1000000 0000000000 00000000 00000 00 0000000
Q ss_pred hHHHHHHHh--cCCChHHHH-HHHHhcC-CCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCC-
Q 024469 160 REFLTIKIY--QLCPPEDLE-LAKMLVR-PGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPV- 234 (267)
Q Consensus 160 ~~~~~~~~~--~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~- 234 (267)
......... ......... ....... .....................++|+++++|++|.+.|......+.+..+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~ 250 (282)
T COG0596 171 AAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPND 250 (282)
T ss_pred ccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCC
Confidence 000000000 000000000 0000000 00000000000000001122368999999999977776655666677775
Q ss_pred CeEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 235 NEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 235 ~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
.++++++++||++++++|+.+++.+.+|.+
T Consensus 251 ~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 251 ARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred ceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 899999999999999999999999988543
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.86 E-value=4.2e-20 Score=161.92 Aligned_cols=251 Identities=12% Similarity=0.116 Sum_probs=138.7
Q ss_pred cceEEEecCCCCChhch-----HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHH-HHHHHHcC---CCCCc
Q 024469 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEP-LMEVLASL---PAEEK 79 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w-----~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~-l~~~i~~l---~~~~~ 79 (267)
++|||++||+..+++.| +.+++.|.++||+|+++|++|+|.|+.. .++++|+.+ +.++++.+ .+.++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~~~v~~l~~~~~~~~ 137 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYIDKCVDYICRTSKLDQ 137 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 46999999997777665 6899999999999999999999987632 466777643 44444332 14578
Q ss_pred EEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCCh-hhh------HHHHHhhcCCCCcccccccccccCCCCCC
Q 024469 80 VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRP-SFV------LEQYSEKMGKEDDSWLDTQFSQCDASNPS 152 (267)
Q Consensus 80 vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (267)
++++||||||.++..++..+|++|+++|++++......... ... ........+.....++...+....+ ...
T Consensus 138 i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p-~~~ 216 (350)
T TIGR01836 138 ISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKP-FSL 216 (350)
T ss_pred ccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCc-chh
Confidence 99999999999999999899999999999997432111100 000 0011111100001111100000000 000
Q ss_pred cc-------ceeechHHHHHH----H-hcCCChH---H-HHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCC
Q 024469 153 HI-------SMLFGREFLTIK----I-YQLCPPE---D-LELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEE 216 (267)
Q Consensus 153 ~~-------~~~~~~~~~~~~----~-~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~ 216 (267)
.. ....+++..... . .+...+- . .+....+..........+............++|+++++|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~ 296 (350)
T TIGR01836 217 GYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAER 296 (350)
T ss_pred hhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCC
Confidence 00 000011111110 0 0111000 0 01111111100000000000000001112378999999999
Q ss_pred CccCChHHHHHHHHcCCCC--eEEEecCCCCCCCCCCc---HHHHHHHHHHHHh
Q 024469 217 DIGLPKQFQHWMIQNYPVN--EVMEIKGGDHMAMLSDP---QKLCDCLSQISLK 265 (267)
Q Consensus 217 D~~~~~~~~~~~~~~~p~~--~~~~i~~~gH~~~~e~p---~~~~~~l~~f~~~ 265 (267)
|.++|++.++.+.+..+.. ++++++ +||..++..+ +++.+.|.+|+.+
T Consensus 297 D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 297 DHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 9999999998888877643 556676 8999988655 7888888888864
No 56
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.85 E-value=2.7e-22 Score=164.32 Aligned_cols=214 Identities=16% Similarity=0.160 Sum_probs=125.9
Q ss_pred CeEEEeCCCCCCCCCC---CCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccC
Q 024469 37 HRVTAVDLAASGINMK---RIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 37 ~~via~Dl~G~G~S~~---~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
|+|+++|+||+|.|++ .....++..++++++..+++++ +.+++++|||||||.++..+|.++|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL-GIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH-TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh-CCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 6899999999999985 4446689999999999999999 55789999999999999999999999999999999741
Q ss_pred CCCCCChhhhHHH--HHhhcCCCCcccccccccccCCCCCCccceeec--hHHHHHHHhcCCChHHHHHHHHhcCCC---
Q 024469 114 PDTTHRPSFVLEQ--YSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG--REFLTIKIYQLCPPEDLELAKMLVRPG--- 186 (267)
Q Consensus 114 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 186 (267)
............. ..... ............. ....... .......... ....... ........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~ 149 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQL---LDNFFNFLSDPIK-----PLLGRWPKQFFAYDREFVE-DFLKQFQ-SQQYARFAETD 149 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHH---HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH-THHHHHH-HHHHHHTCHHH
T ss_pred cchhhhhHHHHhhhhhhhhH---HHhhhccccccch-----hhhhhhhhheeeccCcccc-chhhccc-hhhhhHHHHHH
Confidence 0000000000000 00000 0000000000000 0000000 0000000000 0000000 00000000
Q ss_pred ---cccc---ccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCCCCCCCcHHHHHHHH
Q 024469 187 ---SMFI---DNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLS 260 (267)
Q Consensus 187 ---~~~~---~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~ 260 (267)
..+. ...............++|+++++|++|.++|++....+.+..|..++++++++||+.+++.|+++++.|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 150 AFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred HHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0000 0000000000012248899999999999999999999999999999999999999999999999999885
Q ss_pred H
Q 024469 261 Q 261 (267)
Q Consensus 261 ~ 261 (267)
+
T Consensus 230 ~ 230 (230)
T PF00561_consen 230 K 230 (230)
T ss_dssp -
T ss_pred C
Confidence 3
No 57
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.84 E-value=7.9e-20 Score=179.29 Aligned_cols=101 Identities=22% Similarity=0.150 Sum_probs=81.6
Q ss_pred ccceEEEecCCCCChhchHHH-----HHHHhcCCCeEEEeCCCCCCCCCCCCC-cccChHHhhHHHHHHHHc---CCCCC
Q 024469 8 EEKHFVLVHGVNHGAWCWYKL-----KARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLAS---LPAEE 78 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~-----~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~---l~~~~ 78 (267)
.++|||||||+..+.+.|+.+ ++.|.++||+|+++| +|.|+++.. ..+++++|+..+.+.++. + .++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~-~~~ 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDV-TGR 141 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHh-hCC
Confidence 469999999999999999875 788988899999999 477765422 135888888877777765 3 236
Q ss_pred cEEEEeeChhhHHHHHHhh-hCCCccceEEEEecc
Q 024469 79 KVILVGHSLGGVTLALAAD-KFPHKISVAVFVTAF 112 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~-~~p~~v~~lvli~~~ 112 (267)
+++||||||||.+++.+|. +.|++|++||++++.
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~ 176 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSP 176 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecc
Confidence 8999999999999988765 446699999998864
No 58
>PLN02872 triacylglycerol lipase
Probab=99.84 E-value=1.1e-19 Score=160.32 Aligned_cols=252 Identities=15% Similarity=0.142 Sum_probs=142.9
Q ss_pred ccceEEEecCCCCChhchH------HHHHHHhcCCCeEEEeCCCCCCCCCC----C-CCc---ccChHHhh-HHHHHHHH
Q 024469 8 EEKHFVLVHGVNHGAWCWY------KLKARLVAGGHRVTAVDLAASGINMK----R-IED---VHTFHAYS-EPLMEVLA 72 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~------~~~~~L~~~g~~via~Dl~G~G~S~~----~-~~~---~~~~~~~~-~~l~~~i~ 72 (267)
.++||||+||++.++..|. .+...|+++||+|+++|+||+|.|.. . .+. .+++++++ .|+.++|+
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 3689999999999998883 35556888899999999999886531 1 111 25788888 78888888
Q ss_pred cCC--CCCcEEEEeeChhhHHHHHHhhhCCC---ccceEEEEeccCCCC-CCChhh-hHH-----HHHhhcC----CCCc
Q 024469 73 SLP--AEEKVILVGHSLGGVTLALAADKFPH---KISVAVFVTAFMPDT-THRPSF-VLE-----QYSEKMG----KEDD 136 (267)
Q Consensus 73 ~l~--~~~~vilvGHSmGG~i~~~~a~~~p~---~v~~lvli~~~~~~~-~~~~~~-~~~-----~~~~~~~----~~~~ 136 (267)
.+. ..+++++|||||||.++..++ .+|+ +|+.+++++|..... ...+.. ... .+...++ .+..
T Consensus 153 ~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (395)
T PLN02872 153 YVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRS 231 (395)
T ss_pred HHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCc
Confidence 751 236999999999999877444 6776 688889888754321 112110 000 0000000 0000
Q ss_pred ccccccc---------------cccCCCCCCccceeechHHHHHHHhcCCC---hHHHHHHHHhcCCCccc-cc-----c
Q 024469 137 SWLDTQF---------------SQCDASNPSHISMLFGREFLTIKIYQLCP---PEDLELAKMLVRPGSMF-ID-----N 192 (267)
Q Consensus 137 ~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~-----~ 192 (267)
..+.... ...+. + ..++...+.......+. .........+++..... ++ +
T Consensus 232 ~~~~~~~~~~C~~~~~c~~~~~~~~g~--~----~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n 305 (395)
T PLN02872 232 DVLVKLLDSICEGHMDCNDLLTSITGT--N----CCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKN 305 (395)
T ss_pred HHHHHHHHHHccCchhHHHHHHHHhCC--C----cccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhh
Confidence 0000000 00000 0 00000000000100000 00001111112211110 11 1
Q ss_pred cc-c-cccCCccCCC----CccEEEEEeCCCccCChHHHHHHHHcCCC-CeEEEecCCCCC---CCCCCcHHHHHHHHHH
Q 024469 193 LS-K-ESKFSDEGYG----SVKRVYLVCEEDIGLPKQFQHWMIQNYPV-NEVMEIKGGDHM---AMLSDPQKLCDCLSQI 262 (267)
Q Consensus 193 ~~-~-~~~~~~~~~~----~iP~l~i~g~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~gH~---~~~e~p~~~~~~l~~f 262 (267)
+. . ...-+..... ++|+++++|++|.+++++..+.+.+..|. .+++.++++||+ ...|+|++|.+.|.+|
T Consensus 306 ~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~f 385 (395)
T PLN02872 306 LKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQF 385 (395)
T ss_pred HHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHH
Confidence 00 0 0000111111 46999999999999999999888888876 578899999996 4559999999999999
Q ss_pred HHhh
Q 024469 263 SLKY 266 (267)
Q Consensus 263 ~~~~ 266 (267)
++++
T Consensus 386 L~~~ 389 (395)
T PLN02872 386 FRSL 389 (395)
T ss_pred HHHh
Confidence 9864
No 59
>PRK13604 luxD acyl transferase; Provisional
Probab=99.84 E-value=5.6e-19 Score=149.02 Aligned_cols=202 Identities=13% Similarity=0.106 Sum_probs=121.0
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCC-CCCCCCCCcccChHHhhHHHHHHHHcCC--CCCcEEEEee
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS-GINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILVGH 85 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~-G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~vilvGH 85 (267)
.++||++||++.+...+..+++.|.++||.|+.+|++|| |.|+....+ .++.....|+.++++.+. ..+++.|+||
T Consensus 37 ~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~ 115 (307)
T PRK13604 37 NNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-FTMSIGKNSLLTVVDWLNTRGINNLGLIAA 115 (307)
T ss_pred CCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-CcccccHHHHHHHHHHHHhcCCCceEEEEE
Confidence 478999999999887799999999999999999999998 999754322 233444566644444331 3468999999
Q ss_pred ChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccC-CCCCCc-cceeec-hHH
Q 024469 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCD-ASNPSH-ISMLFG-REF 162 (267)
Q Consensus 86 SmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~-~~~ 162 (267)
||||.++..+|... +++.+|+.+|+... ....+. ....... .+.... + .... .....+ ..+
T Consensus 116 SmGgava~~~A~~~--~v~~lI~~sp~~~l-----~d~l~~---~~~~~~~-----~~p~~~lp-~~~d~~g~~l~~~~f 179 (307)
T PRK13604 116 SLSARIAYEVINEI--DLSFLITAVGVVNL-----RDTLER---ALGYDYL-----SLPIDELP-EDLDFEGHNLGSEVF 179 (307)
T ss_pred CHHHHHHHHHhcCC--CCCEEEEcCCcccH-----HHHHHH---hhhcccc-----cCcccccc-cccccccccccHHHH
Confidence 99999987666543 48889998875431 011111 1100000 000000 0 0000 000000 111
Q ss_pred HHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCC--CCeEEEe
Q 024469 163 LTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP--VNEVMEI 240 (267)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p--~~~~~~i 240 (267)
++..+ . .... .+... .......++|.++|+|++|.++|++.++.+.+..+ ..+++++
T Consensus 180 ~~~~~-------------~-~~~~-----~~~s~--i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i 238 (307)
T PRK13604 180 VTDCF-------------K-HGWD-----TLDST--INKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSL 238 (307)
T ss_pred HHHHH-------------h-cCcc-----ccccH--HHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEe
Confidence 11100 0 0000 00000 00011126899999999999999999998887664 6789999
Q ss_pred cCCCCCCC
Q 024469 241 KGGDHMAM 248 (267)
Q Consensus 241 ~~~gH~~~ 248 (267)
+|++|...
T Consensus 239 ~Ga~H~l~ 246 (307)
T PRK13604 239 IGSSHDLG 246 (307)
T ss_pred CCCccccC
Confidence 99999984
No 60
>PRK10566 esterase; Provisional
Probab=99.83 E-value=9.2e-19 Score=146.05 Aligned_cols=204 Identities=13% Similarity=0.092 Sum_probs=119.2
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChH-------HhhHHHHHHHHc---CC--C
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFH-------AYSEPLMEVLAS---LP--A 76 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~-------~~~~~l~~~i~~---l~--~ 76 (267)
.|+||++||++.+...|..+...|+++||+|+++|+||||.+.... ...++. .-.+++.++++. .. .
T Consensus 27 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (249)
T PRK10566 27 LPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGD-EARRLNHFWQILLQNMQEFPTLRAAIREEGWLL 105 (249)
T ss_pred CCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCc-cccchhhHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 4799999999998888999999999889999999999999753211 111111 112333333332 21 2
Q ss_pred CCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccce
Q 024469 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISM 156 (267)
Q Consensus 77 ~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (267)
.++++|+||||||.+++.++.++|+....++++.+. ....+.+.. ... .. ...+ .
T Consensus 106 ~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~---~~~------~~----~~~~--~ 160 (249)
T PRK10566 106 DDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSG----------YFTSLARTL---FPP------LI----PETA--A 160 (249)
T ss_pred ccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcH----------HHHHHHHHh---ccc------cc----cccc--c
Confidence 368999999999999999988888754444443321 011111100 000 00 0000 0
Q ss_pred eechHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCC---
Q 024469 157 LFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP--- 233 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p--- 233 (267)
....... ......... ..+. . ....+.|+++++|++|.++|++..+.+.+.++
T Consensus 161 --~~~~~~~------------~~~~~~~~~--~~~~------~--~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g 216 (249)
T PRK10566 161 --QQAEFNN------------IVAPLAEWE--VTHQ------L--EQLADRPLLLWHGLADDVVPAAESLRLQQALRERG 216 (249)
T ss_pred --cHHHHHH------------HHHHHhhcC--hhhh------h--hhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC
Confidence 0000000 000000000 0000 0 01125799999999999999998888766443
Q ss_pred ---CCeEEEecCCCCCCCCCCcHHHHHHHHHHHHhh
Q 024469 234 ---VNEVMEIKGGDHMAMLSDPQKLCDCLSQISLKY 266 (267)
Q Consensus 234 ---~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~~ 266 (267)
..+++.++++||... |+ ..+.+.+|++++
T Consensus 217 ~~~~~~~~~~~~~~H~~~---~~-~~~~~~~fl~~~ 248 (249)
T PRK10566 217 LDKNLTCLWEPGVRHRIT---PE-ALDAGVAFFRQH 248 (249)
T ss_pred CCcceEEEecCCCCCccC---HH-HHHHHHHHHHhh
Confidence 246678899999863 44 457777888764
No 61
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.82 E-value=4.4e-20 Score=143.13 Aligned_cols=234 Identities=13% Similarity=0.068 Sum_probs=156.3
Q ss_pred cCCccceEEEecCCCCC-hhchHHHHHHHhc-CCCeEEEeCCCCCCCCCCCCC--cccChHHhhHHHHHHHHcCCCCCcE
Q 024469 5 VGMEEKHFVLVHGVNHG-AWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIE--DVHTFHAYSEPLMEVLASLPAEEKV 80 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~-~~~w~~~~~~L~~-~g~~via~Dl~G~G~S~~~~~--~~~~~~~~~~~l~~~i~~l~~~~~v 80 (267)
.|.+...|+++.|.-.+ ..-|..++..|-. ..++++++|-||+|.|..+.. ...-+...+++-.+++++| ..+++
T Consensus 38 ~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~f 116 (277)
T KOG2984|consen 38 YGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPF 116 (277)
T ss_pred cCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCe
Confidence 45555799999999544 4568877766633 338999999999999975432 2234556667778888999 66899
Q ss_pred EEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeech
Q 024469 81 ILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR 160 (267)
Q Consensus 81 ilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
.|+|+|=||..+..+|.++++.|.++|+.++....+.... ..+..+. .. .-|... .+.|....+++
T Consensus 117 svlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~-ma~kgiR-dv----~kWs~r--------~R~P~e~~Yg~ 182 (277)
T KOG2984|consen 117 SVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA-MAFKGIR-DV----NKWSAR--------GRQPYEDHYGP 182 (277)
T ss_pred eEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH-HHHhchH-HH----hhhhhh--------hcchHHHhcCH
Confidence 9999999999999999999999999999886443221110 0111111 00 111110 12233344555
Q ss_pred HHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEe
Q 024469 161 EFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEI 240 (267)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i 240 (267)
+.+++....+.+. .....++. ...+ ........+||+++++|+.|++++...+-++....+.++++++
T Consensus 183 e~f~~~wa~wvD~--v~qf~~~~--dG~f--------Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~ 250 (277)
T KOG2984|consen 183 ETFRTQWAAWVDV--VDQFHSFC--DGRF--------CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIH 250 (277)
T ss_pred HHHHHHHHHHHHH--HHHHhhcC--CCch--------HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEc
Confidence 5544332211100 00011111 0001 1111222489999999999999999988888889999999999
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 241 KGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 241 ~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
+..+|..++.-|++||..+.+|+++
T Consensus 251 peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 251 PEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred cCCCcceeeechHHHHHHHHHHHhc
Confidence 9999999999999999999999975
No 62
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.81 E-value=2.5e-19 Score=149.92 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=84.7
Q ss_pred cceEEEecCCCCC----hhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHH---HcCCCCCcEE
Q 024469 9 EKHFVLVHGVNHG----AWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVL---ASLPAEEKVI 81 (267)
Q Consensus 9 ~~~ivlvHG~~~~----~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i---~~l~~~~~vi 81 (267)
.++|||+||++.. ...|..+++.|+++||+|+++|+||||.|+.... .++++.+++|+.+++ ++. ..++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~-~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQ-GHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhc-CCCCEE
Confidence 4689999999864 3467778999988899999999999999975432 357778888876654 444 347899
Q ss_pred EEeeChhhHHHHHHhhhCCCccceEEEEeccC
Q 024469 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 82 lvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
|+||||||.+++.+|.++|+++.++|+++|..
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 99999999999999999999999999999754
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.77 E-value=1.2e-17 Score=127.47 Aligned_cols=144 Identities=24% Similarity=0.387 Sum_probs=108.2
Q ss_pred eEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~ 90 (267)
+|||+||++.+...|..+.+.|+++||.|+.+|+||+|.+.. ...+.+..+++. +.....++++|+||||||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG----ADAVERVLADIR---AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH----SHHHHHHHHHHH---HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch----hHHHHHHHHHHH---hhcCCCCcEEEEEEccCcH
Confidence 699999999999999999999999999999999999998732 112233333322 1111447999999999999
Q ss_pred HHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHHHhcC
Q 024469 91 TLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQL 170 (267)
Q Consensus 91 i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (267)
++..++.+. .+|+++|+++++ +. .+
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~-~~--------~~--------------------------------------------- 98 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPY-PD--------SE--------------------------------------------- 98 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESES-SG--------CH---------------------------------------------
T ss_pred HHHHHhhhc-cceeEEEEecCc-cc--------hh---------------------------------------------
Confidence 999998877 889999998862 10 00
Q ss_pred CChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCC-CCeEEEecCCCCC
Q 024469 171 CPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP-VNEVMEIKGGDHM 246 (267)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~gH~ 246 (267)
.+.. .++|+++++|++|.+++++..+.+.+..+ ..+++++++++|+
T Consensus 99 ----------~~~~--------------------~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 99 ----------DLAK--------------------IRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------HHTT--------------------TTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------hhhc--------------------cCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0000 14499999999999999998888877766 5689999999996
No 64
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.73 E-value=2.1e-17 Score=146.21 Aligned_cols=109 Identities=20% Similarity=0.231 Sum_probs=82.8
Q ss_pred CCccceEEEecCCCCCh--hchHH-HHHHHh--cCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC----C-
Q 024469 6 GMEEKHFVLVHGVNHGA--WCWYK-LKARLV--AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----P- 75 (267)
Q Consensus 6 ~~~~~~ivlvHG~~~~~--~~w~~-~~~~L~--~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l----~- 75 (267)
..+++++|+||||..+. ..|.. +.+.|. ...|+||++|++|||.|..+... .....+++++.++|+.| +
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCC
Confidence 35689999999998654 35654 555442 12499999999999988754322 23356667777777754 1
Q ss_pred CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCC
Q 024469 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPD 115 (267)
Q Consensus 76 ~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~ 115 (267)
..++++||||||||.++..++.++|++|.++++++|..|.
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 2479999999999999999999999999999999997664
No 65
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.73 E-value=3.9e-16 Score=128.07 Aligned_cols=114 Identities=20% Similarity=0.214 Sum_probs=98.6
Q ss_pred cCCccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEe
Q 024469 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvG 84 (267)
.|++-.+||-+||.+.+..-|+.+.+.|.+.|.|+|.+.+||+|.++.+.+..|+-.+-...+.++++.|+..++++.+|
T Consensus 31 ~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~g 110 (297)
T PF06342_consen 31 SGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLG 110 (297)
T ss_pred CCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEE
Confidence 34444699999999999999999999999999999999999999999887778999999999999999997667999999
Q ss_pred eChhhHHHHHHhhhCCCccceEEEEeccC--CCCCCCh
Q 024469 85 HSLGGVTLALAADKFPHKISVAVFVTAFM--PDTTHRP 120 (267)
Q Consensus 85 HSmGG~i~~~~a~~~p~~v~~lvli~~~~--~~~~~~~ 120 (267)
||.|+-.|+..|..+| ..++++++|.. +..+.+|
T Consensus 111 HSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp 146 (297)
T PF06342_consen 111 HSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRP 146 (297)
T ss_pred eccchHHHHHHHhcCc--cceEEEecCCccccccCcCH
Confidence 9999999999888875 67999999754 3344444
No 66
>PLN00021 chlorophyllase
Probab=99.70 E-value=1.7e-15 Score=130.03 Aligned_cols=104 Identities=22% Similarity=0.168 Sum_probs=74.5
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC------CCCCcEE
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL------PAEEKVI 81 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l------~~~~~vi 81 (267)
..|+|||+||++.+...|..+++.|+++||.|+++|++|++.+... ....+..+..+.+.+.++.+ ...++++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~-~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~ 129 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGT-DEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLA 129 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCch-hhHHHHHHHHHHHHhhhhhhcccccccChhheE
Confidence 3589999999999888999999999999999999999997543211 11112222233333322221 0225799
Q ss_pred EEeeChhhHHHHHHhhhCCC-----ccceEEEEecc
Q 024469 82 LVGHSLGGVTLALAADKFPH-----KISVAVFVTAF 112 (267)
Q Consensus 82 lvGHSmGG~i~~~~a~~~p~-----~v~~lvli~~~ 112 (267)
|+||||||.++..+|.++++ +|+++|+++++
T Consensus 130 l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 130 LAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred EEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 99999999999999988874 57788888764
No 67
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.68 E-value=1.7e-16 Score=134.26 Aligned_cols=109 Identities=21% Similarity=0.232 Sum_probs=80.4
Q ss_pred CCccceEEEecCCCCCh-hchHHH-HH-HHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC----C-CC
Q 024469 6 GMEEKHFVLVHGVNHGA-WCWYKL-KA-RLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----P-AE 77 (267)
Q Consensus 6 ~~~~~~ivlvHG~~~~~-~~w~~~-~~-~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l----~-~~ 77 (267)
..+++++|+||||+.+. ..|... .. .|...+|+|+++|+++++.+..+. ...++...++++.++++.+ + ..
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~-a~~~~~~v~~~la~~l~~L~~~~g~~~ 111 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ-AVNNTRVVGAELAKFLDFLVDNTGLSL 111 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH-HHHhHHHHHHHHHHHHHHHHHhcCCCh
Confidence 45578999999998777 677554 33 344457999999999985433221 2234555556666666554 1 23
Q ss_pred CcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCC
Q 024469 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPD 115 (267)
Q Consensus 78 ~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~ 115 (267)
++++||||||||.++..++.++|++|.++|.++|..|.
T Consensus 112 ~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 112 ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 68999999999999999999999999999999987664
No 68
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.67 E-value=1.8e-14 Score=122.23 Aligned_cols=105 Identities=19% Similarity=0.234 Sum_probs=76.2
Q ss_pred ccceEEEecCCCCChhchHHH--HHHH-hcCCCeEEEeCC--CCCCCCCCC-------------------CCcccChHHh
Q 024469 8 EEKHFVLVHGVNHGAWCWYKL--KARL-VAGGHRVTAVDL--AASGINMKR-------------------IEDVHTFHAY 63 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~--~~~L-~~~g~~via~Dl--~G~G~S~~~-------------------~~~~~~~~~~ 63 (267)
+.|+|+|+||++.+...|... +..| ++.|+.|++||. +|+|.++.. ....++..++
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 468999999999888888542 3344 446899999998 555533210 0012233444
Q ss_pred -hHHHHHHHHcC-C-CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 64 -SEPLMEVLASL-P-AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 64 -~~~l~~~i~~l-~-~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
+++|..++++. + ..++++|+||||||.+++.++.++|+++.+++++++.
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 67788888762 1 2368999999999999999999999999999998875
No 69
>PRK11460 putative hydrolase; Provisional
Probab=99.66 E-value=4.5e-15 Score=122.67 Aligned_cols=174 Identities=11% Similarity=0.006 Sum_probs=111.1
Q ss_pred CccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCC----C------C---cccChHHhhHHHHHHHHc
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKR----I------E---DVHTFHAYSEPLMEVLAS 73 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~----~------~---~~~~~~~~~~~l~~~i~~ 73 (267)
...+.|||+||++.+...|..+.+.|...++.+..++++|...+... + . ...++.+..+.+.++++.
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 34578999999999999999999999766555555555554321100 0 0 011233333444444443
Q ss_pred ----CC-CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCC
Q 024469 74 ----LP-AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDA 148 (267)
Q Consensus 74 ----l~-~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (267)
.+ ..++++|+||||||.+++.++.++|+.+.++|.+++..+
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~---------------------------------- 139 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA---------------------------------- 139 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc----------------------------------
Confidence 21 125799999999999999988888887777765432100
Q ss_pred CCCCccceeechHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHH
Q 024469 149 SNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWM 228 (267)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~ 228 (267)
.. + . . ...+.|+++++|++|.++|.+.++.+
T Consensus 140 -~~-~-------~---------------------~-------------------~~~~~pvli~hG~~D~vvp~~~~~~~ 170 (232)
T PRK11460 140 -SL-P-------E---------------------T-------------------APTATTIHLIHGGEDPVIDVAHAVAA 170 (232)
T ss_pred -cc-c-------c---------------------c-------------------ccCCCcEEEEecCCCCccCHHHHHHH
Confidence 00 0 0 0 00156899999999999999988876
Q ss_pred HHcC----CCCeEEEecCCCCCCCCCCcHHHHHHHHHHH
Q 024469 229 IQNY----PVNEVMEIKGGDHMAMLSDPQKLCDCLSQIS 263 (267)
Q Consensus 229 ~~~~----p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~ 263 (267)
.+.+ ...++++++++||...-+.-+.+.+.|.+++
T Consensus 171 ~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 171 QEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred HHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 6543 2456788899999996444444444444443
No 70
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.66 E-value=9.2e-15 Score=114.81 Aligned_cols=205 Identities=16% Similarity=0.134 Sum_probs=128.2
Q ss_pred cceEEEecCCCCChh--chHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC-cccChHHhhHHHHHHHHcCCCCCc--EEEE
Q 024469 9 EKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEK--VILV 83 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~--~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~--vilv 83 (267)
.+.+||+||+-++.. ....++.+|++.|+.++-+|++|-|.|...-. +.| ...|+||..++..+....+ .+++
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~--~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNY--NTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcc--cchHHHHHHHHHHhccCceEEEEEE
Confidence 579999999987665 46778999999999999999999999975421 222 3455999999998854333 6789
Q ss_pred eeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCC-ccceeechHH
Q 024469 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPS-HISMLFGREF 162 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 162 (267)
|||=||.++..+|.++++ +..+|-+++-... .. .+.+++.+ ....|+...-.+..+ .+. ....++.++-
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl--~~--~I~eRlg~----~~l~~ike~Gfid~~-~rkG~y~~rvt~eS 180 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRYDL--KN--GINERLGE----DYLERIKEQGFIDVG-PRKGKYGYRVTEES 180 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEcccccch--hc--chhhhhcc----cHHHHHHhCCceecC-cccCCcCceecHHH
Confidence 999999999999999988 6666665542211 00 01111110 111111100000000 000 0011111111
Q ss_pred HHHHHhcCCChHHHHHHHHhcCCCccccccccc-cccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEec
Q 024469 163 LTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSK-ESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIK 241 (267)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~ 241 (267)
+.+. +. .++.. ...+ ...||++.++|..|.++|.+.+.++++.+|+-++++||
T Consensus 181 lmdr----------------Ln------td~h~aclkI----d~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIE 234 (269)
T KOG4667|consen 181 LMDR----------------LN------TDIHEACLKI----DKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIE 234 (269)
T ss_pred HHHH----------------Hh------chhhhhhcCc----CccCceEEEeccCCceeechhHHHHHHhccCCceEEec
Confidence 1000 00 00000 0011 13789999999999999999999999999999999999
Q ss_pred CCCCCCCCCC
Q 024469 242 GGDHMAMLSD 251 (267)
Q Consensus 242 ~~gH~~~~e~ 251 (267)
|+.|.--..+
T Consensus 235 gADHnyt~~q 244 (269)
T KOG4667|consen 235 GADHNYTGHQ 244 (269)
T ss_pred CCCcCccchh
Confidence 9999975544
No 71
>PLN02442 S-formylglutathione hydrolase
Probab=99.63 E-value=5.3e-14 Score=119.73 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=72.9
Q ss_pred CccceEEEecCCCCChhchHH---HHHHHhcCCCeEEEeCCCCCCC-----CCCC----C---------C-----c--cc
Q 024469 7 MEEKHFVLVHGVNHGAWCWYK---LKARLVAGGHRVTAVDLAASGI-----NMKR----I---------E-----D--VH 58 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~---~~~~L~~~g~~via~Dl~G~G~-----S~~~----~---------~-----~--~~ 58 (267)
.+-|.|+|+||+..+...|.. +...+...|+.|++||.+++|. ++.. . . . .+
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 335899999999888777744 3456666799999999987762 1100 0 0 0 01
Q ss_pred ChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 59 TFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 59 ~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
-.+++.+.+.+..+.+ ..++++|+||||||..++.++.++|+++++++.+++.
T Consensus 125 ~~~~l~~~i~~~~~~~-~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 125 VVKELPKLLSDNFDQL-DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHHhc-CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 1222333333444444 3478999999999999999999999999999998875
No 72
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.61 E-value=7.9e-14 Score=112.41 Aligned_cols=220 Identities=14% Similarity=0.105 Sum_probs=137.2
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHH-cCCCCCcEEEEeeCh
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA-SLPAEEKVILVGHSL 87 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~-~l~~~~~vilvGHSm 87 (267)
...+++.|=.|.++..|+.+...|... ..++++++||+|.--... ...+++++++.|.+.+. -. ..++..+.||||
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep-~~~di~~Lad~la~el~~~~-~d~P~alfGHSm 83 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEP-LLTDIESLADELANELLPPL-LDAPFALFGHSM 83 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCc-ccccHHHHHHHHHHHhcccc-CCCCeeecccch
Confidence 468999999999999999989888663 899999999999642222 34699999999999998 34 557999999999
Q ss_pred hhHHHHHHhhhC---CCccceEEEEeccCCCCCC--Chhhh-HHHHHhhcCCCCcccccccccccCCCCCCccceeechH
Q 024469 88 GGVTLALAADKF---PHKISVAVFVTAFMPDTTH--RPSFV-LEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (267)
Q Consensus 88 GG~i~~~~a~~~---p~~v~~lvli~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (267)
||+++-..|.+. .-....+.+.+...|.... ..... -..+.+ .. ...+ .. + ++
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~-----------~l-~~lg--G~-p------~e 142 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLA-----------DL-VDLG--GT-P------PE 142 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHH-----------HH-HHhC--CC-C------hH
Confidence 999999888653 2235566666654441110 00000 000110 00 0000 00 0 01
Q ss_pred HHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCC-CCeEEEe
Q 024469 162 FLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP-VNEVMEI 240 (267)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p-~~~~~~i 240 (267)
++. .++-.++..-.++.+-...+.+. +......++|+.++.|++|..+..+......+... ..++.+|
T Consensus 143 ~le-------d~El~~l~LPilRAD~~~~e~Y~----~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~f 211 (244)
T COG3208 143 LLE-------DPELMALFLPILRADFRALESYR----YPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVF 211 (244)
T ss_pred Hhc-------CHHHHHHHHHHHHHHHHHhcccc----cCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEe
Confidence 110 01111111111111000011111 11112247899999999999999998875555544 6689999
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 241 KGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 241 ~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
+ .||+...++.++|.+.|.+.+.
T Consensus 212 d-GgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 212 D-GGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred c-CcceehhhhHHHHHHHHHHHhh
Confidence 9 7999999999999999988774
No 73
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.58 E-value=3.8e-14 Score=115.55 Aligned_cols=195 Identities=15% Similarity=0.061 Sum_probs=109.2
Q ss_pred chHHHHHHHhcCCCeEEEeCCCCCCCCCCCC---CcccChHHhhHHHHHHHHcC---C--CCCcEEEEeeChhhHHHHHH
Q 024469 24 CWYKLKARLVAGGHRVTAVDLAASGINMKRI---EDVHTFHAYSEPLMEVLASL---P--AEEKVILVGHSLGGVTLALA 95 (267)
Q Consensus 24 ~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~---~~~~~~~~~~~~l~~~i~~l---~--~~~~vilvGHSmGG~i~~~~ 95 (267)
.|+.....|+++||.|+.+|.||.+..+... .....-....+|+.+.++.+ . ..+++.|+|||+||..++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 3455778898999999999999987433210 00001122344444444433 1 12589999999999999999
Q ss_pred hhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHHHhcCCChHH
Q 024469 96 ADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPED 175 (267)
Q Consensus 96 a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (267)
+.++|++++++|..++............ .+. ..............+.
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~~~~--~~~-------------------------------~~~~~~~~~~~~~~~~ 128 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYGTTD--IYT-------------------------------KAEYLEYGDPWDNPEF 128 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBHHTC--CHH-------------------------------HGHHHHHSSTTTSHHH
T ss_pred hcccceeeeeeeccceecchhccccccc--ccc-------------------------------cccccccCccchhhhh
Confidence 8899999999999887532111100000 000 0000000000000111
Q ss_pred HHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHc----CCCCeEEEecCCCCCCCC-C
Q 024469 176 LELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQN----YPVNEVMEIKGGDHMAML-S 250 (267)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~----~p~~~~~~i~~~gH~~~~-e 250 (267)
........ .+... ..+.|+++++|++|..||++.+..+.+. ....+++++|++||.... +
T Consensus 129 ~~~~s~~~--------~~~~~-------~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~ 193 (213)
T PF00326_consen 129 YRELSPIS--------PADNV-------QIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPE 193 (213)
T ss_dssp HHHHHHGG--------GGGGC-------GGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHH
T ss_pred hhhhcccc--------ccccc-------cCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCch
Confidence 11111110 00000 0278999999999999999988766442 334789999999995543 4
Q ss_pred CcHHHHHHHHHHHHhh
Q 024469 251 DPQKLCDCLSQISLKY 266 (267)
Q Consensus 251 ~p~~~~~~l~~f~~~~ 266 (267)
...+..+.+.+|++++
T Consensus 194 ~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 194 NRRDWYERILDFFDKY 209 (213)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4456778888888774
No 74
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.55 E-value=3.4e-13 Score=109.51 Aligned_cols=189 Identities=15% Similarity=0.179 Sum_probs=128.4
Q ss_pred cceEEEecCCCCChhchHHHHHHHhc-CCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC-CCCcEEEEeeC
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVILVGHS 86 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~-~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~vilvGHS 86 (267)
.+++++.||.-..-.....+.-.|.. .+++|+++|..|+|.|...+.. ..+.+..+.+-+.+++-. ..++++|.|+|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE-~n~y~Di~avye~Lr~~~g~~~~Iil~G~S 138 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE-RNLYADIKAVYEWLRNRYGSPERIILYGQS 138 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc-ccchhhHHHHHHHHHhhcCCCceEEEEEec
Confidence 47999999995444333333334433 3689999999999999865432 355566666667777653 34789999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHH
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (267)
||..+...+|.+.| +.+|||.+|... + + +..- + . . .. ...++ .
T Consensus 139 iGt~~tv~Lasr~~--~~alVL~SPf~S--~------~-rv~~----~--~-------~----~~---~~~~d-~----- 181 (258)
T KOG1552|consen 139 IGTVPTVDLASRYP--LAAVVLHSPFTS--G------M-RVAF----P--D-------T----KT---TYCFD-A----- 181 (258)
T ss_pred CCchhhhhHhhcCC--cceEEEeccchh--h------h-hhhc----c--C-------c----ce---EEeec-c-----
Confidence 99999889999988 999999987532 1 1 0000 0 0 0 00 00000 0
Q ss_pred HhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCC-eEEEecCCCC
Q 024469 167 IYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVN-EVMEIKGGDH 245 (267)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~-~~~~i~~~gH 245 (267)
+.+ .+. -...++|+++++|.+|.++|.....++-+..+.. +-.++.|+||
T Consensus 182 f~~--------------------i~k---------I~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH 232 (258)
T KOG1552|consen 182 FPN--------------------IEK---------ISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGH 232 (258)
T ss_pred ccc--------------------cCc---------ceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCC
Confidence 000 011 0123789999999999999999999998888766 6778899999
Q ss_pred CCCCCCcHHHHHHHHHHHHh
Q 024469 246 MAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 246 ~~~~e~p~~~~~~l~~f~~~ 265 (267)
+- ++...++-..+.+|+..
T Consensus 233 ~~-~~~~~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 233 ND-IELYPEYIEHLRRFISS 251 (258)
T ss_pred cc-cccCHHHHHHHHHHHHH
Confidence 97 66677777888888753
No 75
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.54 E-value=3.1e-14 Score=133.47 Aligned_cols=89 Identities=21% Similarity=0.229 Sum_probs=74.1
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCC----------CCcc------------cChHHhhHHH
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKR----------IEDV------------HTFHAYSEPL 67 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~----------~~~~------------~~~~~~~~~l 67 (267)
|+|||+||++.+...|..+++.|.++||+|+++|+||||.|... .... ..+.+++.|+
T Consensus 450 P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dl 529 (792)
T TIGR03502 450 PVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDL 529 (792)
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHH
Confidence 58999999999999999999999888999999999999998432 0000 2778999999
Q ss_pred HHHHHcCC---------------CCCcEEEEeeChhhHHHHHHhhh
Q 024469 68 MEVLASLP---------------AEEKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 68 ~~~i~~l~---------------~~~~vilvGHSmGG~i~~~~a~~ 98 (267)
..+...+. ...+++++||||||+++..++..
T Consensus 530 l~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 530 LGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 98888774 03589999999999999988754
No 76
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.51 E-value=5.5e-13 Score=109.74 Aligned_cols=103 Identities=15% Similarity=0.180 Sum_probs=83.4
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhh
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG 89 (267)
.||+|+|+.+.+...|..+++.|....+.|++++.||++.... ...+++++++...+.|......++.+|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~---~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP---PPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH---EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC---CCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 4899999999999999999999965337999999999984332 2359999999999988876444599999999999
Q ss_pred HHHHHHhhh---CCCccceEEEEeccCCC
Q 024469 90 VTLALAADK---FPHKISVAVFVTAFMPD 115 (267)
Q Consensus 90 ~i~~~~a~~---~p~~v~~lvli~~~~~~ 115 (267)
.+|...|.+ ....|..|+++++..|.
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPS 106 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTT
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCC
Confidence 999988754 34568999999976553
No 77
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.47 E-value=8.1e-13 Score=133.83 Aligned_cols=102 Identities=15% Similarity=0.176 Sum_probs=87.8
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
++++++|+||++.++++|..+.+.|.. +++|+++|+||+|.+.. ..++++++++++.+.++++...++++|+||||
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~ 1142 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQPHGPYHLLGYSL 1142 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCCCCCEEEEEech
Confidence 368999999999999999999999965 59999999999986632 34799999999999999874445899999999
Q ss_pred hhHHHHHHhhh---CCCccceEEEEeccC
Q 024469 88 GGVTLALAADK---FPHKISVAVFVTAFM 113 (267)
Q Consensus 88 GG~i~~~~a~~---~p~~v~~lvli~~~~ 113 (267)
||.++..+|.+ .++++..++++++..
T Consensus 1143 Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1143 GGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 99999998875 588999999998753
No 78
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.47 E-value=8.5e-13 Score=103.60 Aligned_cols=155 Identities=23% Similarity=0.316 Sum_probs=100.1
Q ss_pred EEEecCCCCCh-hchHH-HHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhh
Q 024469 12 FVLVHGVNHGA-WCWYK-LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (267)
Q Consensus 12 ivlvHG~~~~~-~~w~~-~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG 89 (267)
|++|||++.+. ..|.. +...|... ++|-.+|+ +..+++++...|.+.|..+. ++++|||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAID--EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC-T--TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeCHHH
Confidence 68999997664 56754 55666554 78888776 12467888888888888663 579999999999
Q ss_pred HHHHHHh-hhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHHHh
Q 024469 90 VTLALAA-DKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIY 168 (267)
Q Consensus 90 ~i~~~~a-~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (267)
..++.++ .....+|.+++|++++-+. . .. .... .+..
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~~---~------~~------~~~~----~~~~----------------------- 104 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDPD---D------PE------PFPP----ELDG----------------------- 104 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SCG---C------HH------CCTC----GGCC-----------------------
T ss_pred HHHHHHHhhcccccccEEEEEcCCCcc---c------cc------chhh----hccc-----------------------
Confidence 9999887 8888999999999975321 0 00 0000 0000
Q ss_pred cCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCCCC
Q 024469 169 QLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAM 248 (267)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~ 248 (267)
... ... ....+|+++|.+++|+++|.+.++.+++.. ++++++++++||+.-
T Consensus 105 --------------f~~-----------~p~---~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 105 --------------FTP-----------LPR---DPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNA 155 (171)
T ss_dssp --------------CTT-----------SHC---CHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSG
T ss_pred --------------ccc-----------Ccc---cccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccc
Confidence 000 000 001456799999999999999999999876 578999999999976
Q ss_pred CCC
Q 024469 249 LSD 251 (267)
Q Consensus 249 ~e~ 251 (267)
-+-
T Consensus 156 ~~G 158 (171)
T PF06821_consen 156 ASG 158 (171)
T ss_dssp GGT
T ss_pred ccC
Confidence 543
No 79
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.46 E-value=3.1e-12 Score=115.68 Aligned_cols=101 Identities=12% Similarity=0.188 Sum_probs=83.3
Q ss_pred cceEEEecCCCCChhch-----HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC---CCCCcE
Q 024469 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKV 80 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w-----~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~v 80 (267)
+.|||+|+.+-...+.| +.+++.|.++||+|+++|+++-+.++ ...++++|++.|.+.|+.. .+.+++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~~~v 290 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGSRDL 290 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 57999999999888888 57899999999999999999876654 2358899998888777766 234789
Q ss_pred EEEeeChhhHHHHH----HhhhCCC-ccceEEEEeccC
Q 024469 81 ILVGHSLGGVTLAL----AADKFPH-KISVAVFVTAFM 113 (267)
Q Consensus 81 ilvGHSmGG~i~~~----~a~~~p~-~v~~lvli~~~~ 113 (267)
.++||||||..++. +|.++++ +|+.++++.+..
T Consensus 291 nl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatpl 328 (560)
T TIGR01839 291 NLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLL 328 (560)
T ss_pred eEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccc
Confidence 99999999987665 6777785 899999998743
No 80
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.46 E-value=1.9e-13 Score=93.14 Aligned_cols=64 Identities=22% Similarity=0.315 Sum_probs=58.4
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHH
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA 72 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~ 72 (267)
+..|+++||++.++..|..+++.|+++||.|+++|++|||.|+.......+++++++|+.++++
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 5689999999999999999999999999999999999999998655556799999999998874
No 81
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.45 E-value=8.3e-12 Score=104.83 Aligned_cols=102 Identities=20% Similarity=0.181 Sum_probs=65.9
Q ss_pred cceEEEecCCCCChhc-h-HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccC--hHHhhHHHHHHHHcCCCCCcEEEEe
Q 024469 9 EKHFVLVHGVNHGAWC-W-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHT--FHAYSEPLMEVLASLPAEEKVILVG 84 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~-w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~--~~~~~~~l~~~i~~l~~~~~vilvG 84 (267)
.|.||++||+..++.+ | +.+...+.++||.|++++.|||+.+.......|+ .......+++.+++.....+...||
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG 154 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVG 154 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEE
Confidence 4799999999655543 3 6788888899999999999999988653222232 1222223334444434557999999
Q ss_pred eChhhHHHHH-HhhhCCC-ccceEEEEe
Q 024469 85 HSLGGVTLAL-AADKFPH-KISVAVFVT 110 (267)
Q Consensus 85 HSmGG~i~~~-~a~~~p~-~v~~lvli~ 110 (267)
.||||...+. .+++--+ ++.+.+.++
T Consensus 155 ~SLGgnmLa~ylgeeg~d~~~~aa~~vs 182 (345)
T COG0429 155 FSLGGNMLANYLGEEGDDLPLDAAVAVS 182 (345)
T ss_pred ecccHHHHHHHHHhhccCcccceeeeee
Confidence 9999954444 4544322 345555444
No 82
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.41 E-value=2.7e-12 Score=104.63 Aligned_cols=106 Identities=16% Similarity=0.171 Sum_probs=71.1
Q ss_pred ccceEEEecCCCCChhchH---HHHHHHhcCCCeEEEeCCCCCCCCCCCCC---ccc--ChHHhhHHHHHHHHcC----C
Q 024469 8 EEKHFVLVHGVNHGAWCWY---KLKARLVAGGHRVTAVDLAASGINMKRIE---DVH--TFHAYSEPLMEVLASL----P 75 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~---~~~~~L~~~g~~via~Dl~G~G~S~~~~~---~~~--~~~~~~~~l~~~i~~l----~ 75 (267)
..|.||++||.+.+...|. .+.+.+.+.||.|++||.+|+|.+....+ ... .-.....++.++++.+ .
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 3589999999998777664 24555556789999999999875432110 000 0001122222222222 1
Q ss_pred -CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccC
Q 024469 76 -AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 76 -~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
..++++|+||||||..++.++.++|+++.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 12589999999999999999999999999999888643
No 83
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.39 E-value=8.8e-12 Score=116.90 Aligned_cols=204 Identities=18% Similarity=0.085 Sum_probs=121.6
Q ss_pred ceEEEecCCCCChhc--hHHHHHHHhcCCCeEEEeCCCCCCCCCC--------CCCcccChHHhhHHHHHHHHcCCCC--
Q 024469 10 KHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMK--------RIEDVHTFHAYSEPLMEVLASLPAE-- 77 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~--w~~~~~~L~~~g~~via~Dl~G~G~S~~--------~~~~~~~~~~~~~~l~~~i~~l~~~-- 77 (267)
|.||++||.+..... |....+.|+..||-|++++.||.+.-+. .. ....++|..+.+. ++++.+..
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~-g~~~~~D~~~~~~-~l~~~~~~d~ 472 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDW-GGVDLEDLIAAVD-ALVKLPLVDP 472 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhcc-CCccHHHHHHHHH-HHHhCCCcCh
Confidence 689999999866654 5667778889999999999998643211 11 1235566666665 55555433
Q ss_pred CcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCcccee
Q 024469 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISML 157 (267)
Q Consensus 78 ~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (267)
+++.+.|||+||..++.++.+.| ++++.|.+.+.+... ..+... ...+..
T Consensus 473 ~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~--------~~~~~~----~~~~~~----------------- 522 (620)
T COG1506 473 ERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWL--------LYFGES----TEGLRF----------------- 522 (620)
T ss_pred HHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhh--------hhcccc----chhhcC-----------------
Confidence 38999999999998888887777 777766655432110 000000 000000
Q ss_pred echHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHc----CC
Q 024469 158 FGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQN----YP 233 (267)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~----~p 233 (267)
.+ +........ ..+ .+.. ..++......+.|+|+|+|.+|.-+|.+.++++.+. .-
T Consensus 523 -~~----~~~~~~~~~-~~~---~~~~-----------~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~ 582 (620)
T COG1506 523 -DP----EENGGGPPE-DRE---KYED-----------RSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK 582 (620)
T ss_pred -CH----HHhCCCccc-ChH---HHHh-----------cChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCc
Confidence 00 000000000 000 0000 001111122378999999999999999988876543 33
Q ss_pred CCeEEEecCCCCCCCC-CCcHHHHHHHHHHHHh
Q 024469 234 VNEVMEIKGGDHMAML-SDPQKLCDCLSQISLK 265 (267)
Q Consensus 234 ~~~~~~i~~~gH~~~~-e~p~~~~~~l~~f~~~ 265 (267)
..+++++|+.||.+-- ++-..+.+.+.+|+++
T Consensus 583 ~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 583 PVELVVFPDEGHGFSRPENRVKVLKEILDWFKR 615 (620)
T ss_pred eEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHH
Confidence 5578999999999977 2234455555666665
No 84
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.37 E-value=1.4e-10 Score=95.51 Aligned_cols=237 Identities=13% Similarity=0.109 Sum_probs=137.0
Q ss_pred ccceEEEecCCCCChhc-hHH-----HHHHHhcCCCeEEEeCCCCCC--CCCCCCC-cccChHHhhHHHHHHHHcCCCCC
Q 024469 8 EEKHFVLVHGVNHGAWC-WYK-----LKARLVAGGHRVTAVDLAASG--INMKRIE-DVHTFHAYSEPLMEVLASLPAEE 78 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~-w~~-----~~~~L~~~g~~via~Dl~G~G--~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~ 78 (267)
++|.|+=.|..+.+..+ |+. -+..+..+ +-++-+|-|||- ...-+.+ ...|+++++++|..+++.+ ..+
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-~lk 122 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-GLK 122 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-Ccc
Confidence 35778889998866543 544 23445455 888999999984 3333443 2459999999999999999 668
Q ss_pred cEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcC---CCCccccccc-ccccCCCCCCcc
Q 024469 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMG---KEDDSWLDTQ-FSQCDASNPSHI 154 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 154 (267)
.+|-+|---|+.|.+++|..+|+||.+||||++.....+-. .+...++..+.. .--....+.. ...++ ..
T Consensus 123 ~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi-ew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg--~e--- 196 (326)
T KOG2931|consen 123 SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI-EWAYNKVSSNLLYYYGMTQGVKDYLLAHHFG--KE--- 196 (326)
T ss_pred eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH-HHHHHHHHHHHHHhhchhhhHHHHHHHHHhc--cc---
Confidence 99999999999999999999999999999999642211100 011111111000 0000000000 00111 00
Q ss_pred ceeechHHHH---HHHhcCCChHHHHHHHHhcCCCccccccccccccCCccC-----CCCccEEEEEeCCCccCChHHHH
Q 024469 155 SMLFGREFLT---IKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEG-----YGSVKRVYLVCEEDIGLPKQFQH 226 (267)
Q Consensus 155 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~iP~l~i~g~~D~~~~~~~~~ 226 (267)
......+.+. +.+.....+.-.. .+++.+..+.++.... -.++|++++.|.+.+.+.. ..
T Consensus 197 ~~~~~~diVq~Yr~~l~~~~N~~Nl~----------~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~--vv 264 (326)
T KOG2931|consen 197 ELGNNSDIVQEYRQHLGERLNPKNLA----------LFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSA--VV 264 (326)
T ss_pred cccccHHHHHHHHHHHHhcCChhHHH----------HHHHHhcCCCCccccCCCcCccccccEEEEecCCCchhhh--hh
Confidence 0000111111 1111111000000 1111111111221111 2369999999999887543 33
Q ss_pred HHHHcC-C-CCeEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 227 WMIQNY-P-VNEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 227 ~~~~~~-p-~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
.+..+. | .+.+..+.+||=.++.|||.++++.+.=|++
T Consensus 265 ~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 265 ECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred hhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 344433 4 5578899999999999999999999987774
No 85
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.37 E-value=1.6e-11 Score=104.61 Aligned_cols=253 Identities=13% Similarity=0.173 Sum_probs=141.4
Q ss_pred cceEEEecCCCCCh--hc--------h-HHHHH---HHhcCCCeEEEeCCCCCCC-CCCC----CC--------cccChH
Q 024469 9 EKHFVLVHGVNHGA--WC--------W-YKLKA---RLVAGGHRVTAVDLAASGI-NMKR----IE--------DVHTFH 61 (267)
Q Consensus 9 ~~~ivlvHG~~~~~--~~--------w-~~~~~---~L~~~g~~via~Dl~G~G~-S~~~----~~--------~~~~~~ 61 (267)
...|+++||+..++ .. | ..++- .+.-..|.||+.|-.|.+. |+.+ +. ...|+.
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~ 130 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIR 130 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHH
Confidence 45799999997532 22 4 33221 1212359999999999763 3322 11 235888
Q ss_pred HhhHHHHHHHHcCCCCCcEE-EEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCccccc
Q 024469 62 AYSEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLD 140 (267)
Q Consensus 62 ~~~~~l~~~i~~l~~~~~vi-lvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (267)
|+++.-..++++| +.+++. +||-||||+.++..+..+|++|.++|.|++........ ..+....++.-..-+.|..
T Consensus 131 D~V~aq~~ll~~L-GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~--ia~~~~~r~AI~~DP~~n~ 207 (368)
T COG2021 131 DMVRAQRLLLDAL-GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQN--IAFNEVQRQAIEADPDWNG 207 (368)
T ss_pred HHHHHHHHHHHhc-CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHH--HHHHHHHHHHHHhCCCccC
Confidence 9998888899999 567755 89999999999999999999999999999754332211 1111111111001122321
Q ss_pred ccccccC-CCCCC-ccc-----ee-echHHHHHHHhcCC---------ChHHHHH-----HHHh---cCCCccc------
Q 024469 141 TQFSQCD-ASNPS-HIS-----ML-FGREFLTIKIYQLC---------PPEDLEL-----AKML---VRPGSMF------ 189 (267)
Q Consensus 141 ~~~~~~~-~~~~~-~~~-----~~-~~~~~~~~~~~~~~---------~~~~~~~-----~~~~---~~~~~~~------ 189 (267)
-.+.... | ..- ... .. .+++.+.+.+.... .+...+- ...+ +.+..+.
T Consensus 208 G~Y~~~~~P-~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~al 286 (368)
T COG2021 208 GDYYEGTQP-ERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRAL 286 (368)
T ss_pred CCccCCCCc-chhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Confidence 1111000 0 000 000 00 01112222222200 0000000 0000 0011110
Q ss_pred -ccccccc-ccCCc-cCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCe-EEEe-cCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 190 -IDNLSKE-SKFSD-EGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNE-VMEI-KGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 190 -~~~~~~~-~~~~~-~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~-~~~i-~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
..++... ..+.. ..-.++|++++--+.|...|++.++++++.++.+. +++| ...||-.++...+.+...|.+|++
T Consensus 287 d~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~ 366 (368)
T COG2021 287 DYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLA 366 (368)
T ss_pred HhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhh
Confidence 0001100 00000 01135799999999999999999999999988776 6555 568999999999999999999986
Q ss_pred h
Q 024469 265 K 265 (267)
Q Consensus 265 ~ 265 (267)
.
T Consensus 367 ~ 367 (368)
T COG2021 367 L 367 (368)
T ss_pred c
Confidence 3
No 86
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.36 E-value=3.6e-11 Score=104.39 Aligned_cols=103 Identities=19% Similarity=0.256 Sum_probs=68.7
Q ss_pred cceEEEecCCCCCh-hch-HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC---CCCCcEEEE
Q 024469 9 EKHFVLVHGVNHGA-WCW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILV 83 (267)
Q Consensus 9 ~~~ivlvHG~~~~~-~~w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~vilv 83 (267)
.|.||+|||...++ ..| +.++..+.+.||||+++..||+|.|.-.....|+ .-..+|+.++++.+ -...+...|
T Consensus 125 ~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~-ag~t~Dl~~~v~~i~~~~P~a~l~av 203 (409)
T KOG1838|consen 125 DPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFT-AGWTEDLREVVNHIKKRYPQAPLFAV 203 (409)
T ss_pred CcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceee-cCCHHHHHHHHHHHHHhCCCCceEEE
Confidence 58999999996544 444 5566667788999999999999988743323332 12223333333333 255789999
Q ss_pred eeChhhHHHHHHhhhCC---CccceEEEEecc
Q 024469 84 GHSLGGVTLALAADKFP---HKISVAVFVTAF 112 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~p---~~v~~lvli~~~ 112 (267)
|.||||++.+.|..+-. ..+.++++++|+
T Consensus 204 G~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 204 GFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred EecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 99999999888854332 234556555554
No 87
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.36 E-value=2.7e-11 Score=99.13 Aligned_cols=165 Identities=19% Similarity=0.076 Sum_probs=98.4
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCC-CCC-CCCccc--------ChHHhhHHHHHHHHcC---
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGI-NMK-RIEDVH--------TFHAYSEPLMEVLASL--- 74 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~-S~~-~~~~~~--------~~~~~~~~l~~~i~~l--- 74 (267)
+.+.||++|+++.-....+.++..|++.||.|++||+-+-.. ... ...... ..+...+++.+.++.|
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 468999999998655667789999999999999999875433 111 111000 1234455664444444
Q ss_pred C--CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCC
Q 024469 75 P--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPS 152 (267)
Q Consensus 75 ~--~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (267)
. ..+++.++|.|+||.+++.+|.+. .+|++.|..-+. .. . .
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~-----~~----------------------------~-~-- 135 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGG-----SP----------------------------P-P-- 135 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-S-----SS----------------------------G-G--
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCC-----CC----------------------------C-C--
Confidence 2 125899999999999999888665 566666543320 00 0 0
Q ss_pred ccceeechHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHH--
Q 024469 153 HISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQ-- 230 (267)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~-- 230 (267)
. .. .. . ...++|+++++|++|+.++++..+.+.+
T Consensus 136 -------~--------------~~---~~-~-------------------~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l 171 (218)
T PF01738_consen 136 -------P--------------PL---ED-A-------------------PKIKAPVLILFGENDPFFPPEEVEALEEAL 171 (218)
T ss_dssp -------G--------------HH---HH-G-------------------GG--S-EEEEEETT-TTS-HHHHHHHHHHH
T ss_pred -------c--------------ch---hh-h-------------------cccCCCEeecCccCCCCCChHHHHHHHHHH
Confidence 0 00 00 0 0026799999999999999987555443
Q ss_pred --cCCCCeEEEecCCCCCCCCCCcH
Q 024469 231 --NYPVNEVMEIKGGDHMAMLSDPQ 253 (267)
Q Consensus 231 --~~p~~~~~~i~~~gH~~~~e~p~ 253 (267)
.....++++++|++|..+....+
T Consensus 172 ~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 172 KAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp HCTTTTEEEEEETT--TTTTSTTST
T ss_pred HhcCCcEEEEECCCCcccccCCCCc
Confidence 34567899999999998876544
No 88
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.36 E-value=3.6e-11 Score=101.26 Aligned_cols=107 Identities=15% Similarity=0.267 Sum_probs=90.2
Q ss_pred cceEEEecCCCCChhchHHHHHHHhc---CCCeEEEeCCCCCCCCCCC-----CCcccChHHhhHHHHHHHHcC-C----
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVA---GGHRVTAVDLAASGINMKR-----IEDVHTFHAYSEPLMEVLASL-P---- 75 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~---~g~~via~Dl~G~G~S~~~-----~~~~~~~~~~~~~l~~~i~~l-~---- 75 (267)
..-||+|.|.++-...|..+...|.+ ..+.|++..+.||-.++.. ....+++++..+.-.++|+++ .
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 35689999999999999998888863 3689999999999876643 346789999999988888877 2
Q ss_pred CCCcEEEEeeChhhHHHHHHhhhCC---CccceEEEEeccCCC
Q 024469 76 AEEKVILVGHSLGGVTLALAADKFP---HKISVAVFVTAFMPD 115 (267)
Q Consensus 76 ~~~~vilvGHSmGG~i~~~~a~~~p---~~v~~lvli~~~~~~ 115 (267)
...+++|+|||+|+.+++....+.+ .+|.+++++.|....
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 3458999999999999999999999 789999999986543
No 89
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.35 E-value=2.5e-10 Score=90.66 Aligned_cols=86 Identities=23% Similarity=0.383 Sum_probs=63.9
Q ss_pred EEEecCCCCChhchHH--HHHHHhcCC--CeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 12 FVLVHGVNHGAWCWYK--LKARLVAGG--HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 12 ivlvHG~~~~~~~w~~--~~~~L~~~g--~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
|+.||||.+++.+... +.+.+++.+ .+++++|+|- +.....+.+.++|+.. ..+.++|||+||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~------------~p~~a~~~l~~~i~~~-~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP------------FPEEAIAQLEQLIEEL-KPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc------------CHHHHHHHHHHHHHhC-CCCCeEEEEECh
Confidence 7899999998877643 566665543 4677888761 2345567777888877 435699999999
Q ss_pred hhHHHHHHhhhCCCccceEEEEeccC
Q 024469 88 GGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 88 GG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
||..++.+|.+++-+ + |+|+|.+
T Consensus 69 GG~~A~~La~~~~~~--a-vLiNPav 91 (187)
T PF05728_consen 69 GGFYATYLAERYGLP--A-VLINPAV 91 (187)
T ss_pred HHHHHHHHHHHhCCC--E-EEEcCCC
Confidence 999999999888633 3 8888764
No 90
>PRK10162 acetyl esterase; Provisional
Probab=99.34 E-value=1.6e-10 Score=99.95 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=71.0
Q ss_pred cceEEEecCCC---CChhchHHHHHHHhc-CCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCC-CCcEEEE
Q 024469 9 EKHFVLVHGVN---HGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA-EEKVILV 83 (267)
Q Consensus 9 ~~~ivlvHG~~---~~~~~w~~~~~~L~~-~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~-~~~vilv 83 (267)
.+.||++||.+ .+...|..+...|+. .|+.|+++|+|.......+. ...+..+..+.+.+..+.++. .++++|+
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~-~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 159 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ-AIEEIVAVCCYFHQHAEDYGINMSRIGFA 159 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC-cHHHHHHHHHHHHHhHHHhCCChhHEEEE
Confidence 47899999965 455678888888876 48999999999654432221 112333333444444444531 2589999
Q ss_pred eeChhhHHHHHHhhhC------CCccceEEEEeccC
Q 024469 84 GHSLGGVTLALAADKF------PHKISVAVFVTAFM 113 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~------p~~v~~lvli~~~~ 113 (267)
|||+||.+++.++.+. +.++.++|++.++.
T Consensus 160 G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 160 GDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred EECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 9999999888776542 35788999988754
No 91
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.34 E-value=1.8e-11 Score=103.66 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=88.3
Q ss_pred CCccceEEEecCCCCChhchHHHHHHHhcC---------CCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCC
Q 024469 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAG---------GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA 76 (267)
Q Consensus 6 ~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~---------g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~ 76 (267)
+..=.|++++|||+.+-+.+.++++.|... -+.||||.|||+|.|+.+...-..-.+.|.-+..++-.| +
T Consensus 149 ~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRL-g 227 (469)
T KOG2565|consen 149 KKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRL-G 227 (469)
T ss_pred CCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHh-C
Confidence 333369999999999999999999999643 269999999999999976554456677888888888888 6
Q ss_pred CCcEEEEeeChhhHHHHHHhhhCCCccceEEEEec
Q 024469 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 77 ~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
..+..|=|-.+|..|++.+|..+|++|.++=+-.+
T Consensus 228 ~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 228 YNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred cceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 68999999999999999999999999998765443
No 92
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.34 E-value=2.6e-12 Score=119.05 Aligned_cols=102 Identities=17% Similarity=0.048 Sum_probs=77.6
Q ss_pred cceEEEecCCCCChh---chH-HHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC----CCCcE
Q 024469 9 EKHFVLVHGVNHGAW---CWY-KLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP----AEEKV 80 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~---~w~-~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~v 80 (267)
.|+||++||++.+.. .|. .....|.++||.|+++|+||+|.|+..... ++ ...++|+.++|+.+. ...++
T Consensus 22 ~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~~~D~~~~i~~l~~q~~~~~~v 99 (550)
T TIGR00976 22 VPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-LG-SDEAADGYDLVDWIAKQPWCDGNV 99 (550)
T ss_pred CCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe-cC-cccchHHHHHHHHHHhCCCCCCcE
Confidence 478999999986542 232 244567788999999999999999854322 22 456666666666541 12589
Q ss_pred EEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 81 ILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 81 ilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
.++||||||.+++.+|..+|.+++++|..++.
T Consensus 100 ~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 100 GMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred EEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 99999999999999999999999999988764
No 93
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.33 E-value=4.3e-11 Score=97.85 Aligned_cols=177 Identities=18% Similarity=0.212 Sum_probs=103.2
Q ss_pred CccceEEEecCCCCChhchHHHHHH-HhcCCCeEEEeCCCC------CCCC--CC------CC---CcccChHHhhHHHH
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKAR-LVAGGHRVTAVDLAA------SGIN--MK------RI---EDVHTFHAYSEPLM 68 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~-L~~~g~~via~Dl~G------~G~S--~~------~~---~~~~~~~~~~~~l~ 68 (267)
...+.|||+||.+.+...|..+... +.....+++.+.=|- .|.. .. .. .+...+...++.|.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 3457999999999999878766552 222345667664331 2221 10 01 01224555556666
Q ss_pred HHHHcC---C-CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCccccccccc
Q 024469 69 EVLASL---P-AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFS 144 (267)
Q Consensus 69 ~~i~~l---~-~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (267)
++|+.. + ..++++|.|.|.||++++.++.++|+++.++|.+++..+...
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~--------------------------- 144 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES--------------------------- 144 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC---------------------------
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc---------------------------
Confidence 666643 1 235899999999999999999999999999999987543100
Q ss_pred ccCCCCCCccceeechHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHH
Q 024469 145 QCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQF 224 (267)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~ 224 (267)
. . ..... ...++|.++++|.+|.++|.+.
T Consensus 145 -----~--~--------------------------~~~~~------------------~~~~~pi~~~hG~~D~vvp~~~ 173 (216)
T PF02230_consen 145 -----E--L--------------------------EDRPE------------------ALAKTPILIIHGDEDPVVPFEW 173 (216)
T ss_dssp -----C--C--------------------------HCCHC------------------CCCTS-EEEEEETT-SSSTHHH
T ss_pred -----c--c--------------------------ccccc------------------ccCCCcEEEEecCCCCcccHHH
Confidence 0 0 00000 0016789999999999999987
Q ss_pred HHHHHHc----CCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 225 QHWMIQN----YPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 225 ~~~~~~~----~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
++...+. ....+++++++.||.+. ++++ +.+.+|+++
T Consensus 174 ~~~~~~~L~~~~~~v~~~~~~g~gH~i~---~~~~-~~~~~~l~~ 214 (216)
T PF02230_consen 174 AEKTAEFLKAAGANVEFHEYPGGGHEIS---PEEL-RDLREFLEK 214 (216)
T ss_dssp HHHHHHHHHCTT-GEEEEEETT-SSS-----HHHH-HHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCCCCCC---HHHH-HHHHHHHhh
Confidence 7765432 23467899999999884 3444 556677764
No 94
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.32 E-value=3e-11 Score=99.12 Aligned_cols=101 Identities=22% Similarity=0.233 Sum_probs=65.5
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhc--------CCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHc----C-
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVA--------GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS----L- 74 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~--------~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~----l- 74 (267)
+|.|||||||...+...|+.+...+.. ..+++++.|+...... .. ..++.+.++.+.+.++. .
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~~---g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSA-FH---GRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccc-cc---cccHHHHHHHHHHHHHHHHHhhh
Confidence 478999999998887778777766521 2478899998764311 11 11333333322222222 2
Q ss_pred ---CCCCcEEEEeeChhhHHHHHHhhhC---CCccceEEEEecc
Q 024469 75 ---PAEEKVILVGHSLGGVTLALAADKF---PHKISVAVFVTAF 112 (267)
Q Consensus 75 ---~~~~~vilvGHSmGG~i~~~~a~~~---p~~v~~lvli~~~ 112 (267)
...++++||||||||.++-.+.... ++.|..+|.+++.
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 2447899999999999877765443 3579999999863
No 95
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.31 E-value=1.6e-10 Score=96.18 Aligned_cols=234 Identities=14% Similarity=0.166 Sum_probs=121.3
Q ss_pred ccceEEEecCCCCChhc-hHHH-----HHHHhcCCCeEEEeCCCCCCCCC--CCCC-cccChHHhhHHHHHHHHcCCCCC
Q 024469 8 EEKHFVLVHGVNHGAWC-WYKL-----KARLVAGGHRVTAVDLAASGINM--KRIE-DVHTFHAYSEPLMEVLASLPAEE 78 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~-w~~~-----~~~L~~~g~~via~Dl~G~G~S~--~~~~-~~~~~~~~~~~l~~~i~~l~~~~ 78 (267)
+.|+||=.|=.+.+..+ |..+ +..+.+ .+-++=+|-|||.... .+.+ .-.|++++|++|.++++.+ +.+
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-~lk 99 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-GLK 99 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH-T--
T ss_pred CCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC-Ccc
Confidence 35788889977765543 5443 344544 4888999999996533 3333 2349999999999999999 678
Q ss_pred cEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceee
Q 024469 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLF 158 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
.+|-+|---|+.|.+++|..+|++|.+||||++.....+ ..+.+..++ ..| .+...+. .. .
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g-----w~Ew~~~K~----~~~---~L~~~gm-t~------~ 160 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG-----WMEWFYQKL----SSW---LLYSYGM-TS------S 160 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S--------HHHHHHHHH----H----------CT-TS-------
T ss_pred EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc-----HHHHHHHHH----hcc---ccccccc-cc------c
Confidence 999999999999999999999999999999997532211 112211111 000 1111110 00 0
Q ss_pred chHHHHHHHhc-----CCChHHHHHH-HHhcCCCc-----cccccccccccCCc-cCCCCccEEEEEeCCCccCChHHHH
Q 024469 159 GREFLTIKIYQ-----LCPPEDLELA-KMLVRPGS-----MFIDNLSKESKFSD-EGYGSVKRVYLVCEEDIGLPKQFQH 226 (267)
Q Consensus 159 ~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~iP~l~i~g~~D~~~~~~~~~ 226 (267)
..+++....+. ...+ -.+.. +.+.+..+ .+++.+..+.++.. .....+|++++.|.+.+.... ..
T Consensus 161 ~~d~Ll~h~Fg~~~~~~n~D-lv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~--vv 237 (283)
T PF03096_consen 161 VKDYLLWHYFGKEEEENNSD-LVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDD--VV 237 (283)
T ss_dssp HHHHHHHHHS-HHHHHCT-H-HHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHH--HH
T ss_pred hHHhhhhcccccccccccHH-HHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhh--HH
Confidence 01111111110 0111 01111 11111111 11111111112221 122358999999999887543 34
Q ss_pred HHHHc-CC-CCeEEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 227 WMIQN-YP-VNEVMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 227 ~~~~~-~p-~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
.+-++ .| .+++..+++||=.+..|||+++++.+.=|++=
T Consensus 238 ~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 238 EMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred HHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 45444 45 44789999999999999999999999988864
No 96
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.25 E-value=1e-10 Score=92.37 Aligned_cols=200 Identities=16% Similarity=0.179 Sum_probs=126.2
Q ss_pred ccceEEEecCCCCChhchHHHHHHH-hcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC--CCCcEEEEe
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARL-VAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILVG 84 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L-~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~vilvG 84 (267)
+.++++..||...+....-.++.-+ ...+-+|+.++.||+|.|...+.+ ..+...++.+++-+-+-. ...+.+|.|
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE-~GL~lDs~avldyl~t~~~~dktkivlfG 155 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE-EGLKLDSEAVLDYLMTRPDLDKTKIVLFG 155 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc-cceeccHHHHHHHHhcCccCCcceEEEEe
Confidence 5799999999876665433333332 334579999999999999865432 355555565555554332 225899999
Q ss_pred eChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHH
Q 024469 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLT 164 (267)
Q Consensus 85 HSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (267)
-|+||+++...|.+..+|+.++|+.+.+..- ..... + ....+. -+.+.
T Consensus 156 rSlGGAvai~lask~~~ri~~~ivENTF~SI--------p~~~i-----~-------~v~p~~------------~k~i~ 203 (300)
T KOG4391|consen 156 RSLGGAVAIHLASKNSDRISAIIVENTFLSI--------PHMAI-----P-------LVFPFP------------MKYIP 203 (300)
T ss_pred cccCCeeEEEeeccchhheeeeeeechhccc--------hhhhh-----h-------eeccch------------hhHHH
Confidence 9999999999999999999999998864211 00000 0 000000 00000
Q ss_pred HHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCC--CCeEEEecC
Q 024469 165 IKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP--VNEVMEIKG 242 (267)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p--~~~~~~i~~ 242 (267)
...+ +..... ... -...++|.++|-|..|.++||..-+.+-...| ..++.+||+
T Consensus 204 ~lc~-----------kn~~~S-------~~k------i~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~ 259 (300)
T KOG4391|consen 204 LLCY-----------KNKWLS-------YRK------IGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPD 259 (300)
T ss_pred HHHH-----------Hhhhcc-------hhh------hccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCC
Confidence 0000 000000 000 01127899999999999999999998888776 457899999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHh
Q 024469 243 GDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 243 ~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
+.|.=-+-+ +..-++|.+|+.+
T Consensus 260 gtHNDT~i~-dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 260 GTHNDTWIC-DGYFQAIEDFLAE 281 (300)
T ss_pred CccCceEEe-ccHHHHHHHHHHH
Confidence 999755533 3444777777743
No 97
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.16 E-value=9.4e-11 Score=104.70 Aligned_cols=89 Identities=15% Similarity=0.245 Sum_probs=67.8
Q ss_pred CChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC---CCCCcEEEEeeChhhHHHHHHh
Q 024469 20 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVGHSLGGVTLALAA 96 (267)
Q Consensus 20 ~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~vilvGHSmGG~i~~~~a 96 (267)
.....|..+++.|++.|| +...||+|+|.+-+.. ..++++.+++.++|+.+ .+.++++||||||||.++..++
T Consensus 105 ~~~~~~~~li~~L~~~GY-~~~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGY-KEGKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred chHHHHHHHHHHHHHcCC-ccCCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHH
Confidence 456789999999999987 5589999999986543 23445555555555533 1457999999999999999998
Q ss_pred hhCCCc----cceEEEEecc
Q 024469 97 DKFPHK----ISVAVFVTAF 112 (267)
Q Consensus 97 ~~~p~~----v~~lvli~~~ 112 (267)
..+|+. |+++|.+++.
T Consensus 181 ~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 181 SLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HHCCHhHHhHhccEEEECCC
Confidence 888864 7889999863
No 98
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.15 E-value=3.9e-10 Score=93.50 Aligned_cols=101 Identities=16% Similarity=0.206 Sum_probs=86.6
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhh
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG 89 (267)
+|+.|+|+.....++|..+...|... ++|++++-||.|.-.. ...+++++++..++.|.+.....+.+|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~---~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQ---PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccc---ccCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 58999999999999999999999765 8999999999986332 3359999999999999988555799999999999
Q ss_pred HHHHHHhhh---CCCccceEEEEeccCC
Q 024469 90 VTLALAADK---FPHKISVAVFVTAFMP 114 (267)
Q Consensus 90 ~i~~~~a~~---~p~~v~~lvli~~~~~ 114 (267)
.++..+|.+ ..+.|..|+++|+..+
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999988754 4567999999998655
No 99
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.14 E-value=5.9e-10 Score=97.50 Aligned_cols=103 Identities=18% Similarity=0.178 Sum_probs=68.4
Q ss_pred ceEEEecCCCCChh-chHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCC--CcEEEEeeC
Q 024469 10 KHFVLVHGVNHGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE--EKVILVGHS 86 (267)
Q Consensus 10 ~~ivlvHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~--~~vilvGHS 86 (267)
|+||++=|.-+-.. .|+...+.|..+|+.++++|.||-|.|.+..- ..+-+.+-..|++.+...... .++.++|-|
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l-~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~S 269 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL-TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFS 269 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHSTTEEEEEEEEEEET
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC-CcCHHHHHHHHHHHHhcCCccChhheEEEEec
Confidence 44444445544443 45555677888999999999999999864321 123345667778888877422 489999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEeccC
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
+||.++.++|...++||+++|.+++.+
T Consensus 270 fGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 270 FGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp HHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred cchHHHHHHHHhcccceeeEeeeCchH
Confidence 999999999988899999999998753
No 100
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.09 E-value=4.5e-10 Score=92.72 Aligned_cols=102 Identities=23% Similarity=0.212 Sum_probs=73.4
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHH-cCC-----CCCcEEEE
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA-SLP-----AEEKVILV 83 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~-~l~-----~~~~vilv 83 (267)
|.+||+||++.....|..+.++++++||-|+++|+...+.... ..+..++.+..+.+.+=++ .+. ...++.|.
T Consensus 18 PVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~-~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~ 96 (259)
T PF12740_consen 18 PVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDD-TDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALA 96 (259)
T ss_pred CEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCc-chhHHHHHHHHHHHHhcchhhccccccccccceEEe
Confidence 8999999999777779999999999999999999776543211 1122233333333322111 111 23589999
Q ss_pred eeChhhHHHHHHhhhC-----CCccceEEEEecc
Q 024469 84 GHSLGGVTLALAADKF-----PHKISVAVFVTAF 112 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~-----p~~v~~lvli~~~ 112 (267)
|||-||-++..++.++ +.+++++|+++|+
T Consensus 97 GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 97 GHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred eeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 9999999998888777 5689999999975
No 101
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.09 E-value=1.9e-09 Score=86.11 Aligned_cols=229 Identities=15% Similarity=0.205 Sum_probs=117.5
Q ss_pred eEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC--cccChHHhhH-HHHHHHHcC---CCCCcEEEEe
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE--DVHTFHAYSE-PLMEVLASL---PAEEKVILVG 84 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~--~~~~~~~~~~-~l~~~i~~l---~~~~~vilvG 84 (267)
.+|.--+++-....|+.++..++..||.|+.+|+||.|.|+.... ..+++.|++. |+...|+.+ .+..+...||
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vg 111 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVG 111 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEee
Confidence 455555666777889999999999999999999999999875321 1235555543 333333333 1446899999
Q ss_pred eChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhh-hHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHH
Q 024469 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSF-VLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFL 163 (267)
Q Consensus 85 HSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (267)
|||||-+...+. ++| ++..- .+-++.+ +-++.. ..+.. .-+. ......+ +.... +..+
T Consensus 112 HS~GGqa~gL~~-~~~-k~~a~-~vfG~ga--gwsg~m~~~~~l--------~~~~--l~~lv~p----~lt~w--~g~~ 170 (281)
T COG4757 112 HSFGGQALGLLG-QHP-KYAAF-AVFGSGA--GWSGWMGLRERL--------GAVL--LWNLVGP----PLTFW--KGYM 170 (281)
T ss_pred ccccceeecccc-cCc-cccee-eEecccc--ccccchhhhhcc--------ccee--ecccccc----chhhc--cccC
Confidence 999999555444 444 33222 2222211 111110 00100 0000 0000000 00000 0011
Q ss_pred HHHHhcC---CChHHHHHHHHhcCCCccccccccccccCC-ccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeE--
Q 024469 164 TIKIYQL---CPPEDLELAKMLVRPGSMFIDNLSKESKFS-DEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEV-- 237 (267)
Q Consensus 164 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~-- 237 (267)
...+... .+-...+-.....+..+.++++-. ...+. .....++|++.+.+.+|+.+|+...+.+.+..+++.+
T Consensus 171 p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~-~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~ 249 (281)
T COG4757 171 PKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPA-MRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEM 249 (281)
T ss_pred cHhhcCCCccCcchHHHHHHHHhcCccccccChh-HhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccc
Confidence 1111111 111111111222333333222200 00000 0112378999999999999999999999887776654
Q ss_pred EEecC----CCCCCCCCCc-HHHHHHHHH
Q 024469 238 MEIKG----GDHMAMLSDP-QKLCDCLSQ 261 (267)
Q Consensus 238 ~~i~~----~gH~~~~e~p-~~~~~~l~~ 261 (267)
..++. -||+-..-+| |.+-+.+..
T Consensus 250 ~~~~~~~~~lGH~gyfR~~~Ealwk~~L~ 278 (281)
T COG4757 250 RDLPRAEGPLGHMGYFREPFEALWKEMLG 278 (281)
T ss_pred eecCcccCcccchhhhccchHHHHHHHHH
Confidence 34433 5999998887 665555443
No 102
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.07 E-value=1.3e-08 Score=89.84 Aligned_cols=100 Identities=12% Similarity=0.113 Sum_probs=76.7
Q ss_pred ceEEEecCCCCChhc-hHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 10 KHFVLVHGVNHGAWC-WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~-w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
+|||+|--+-.+-+. -+.+++.|-+ ||.|+..|+.--+..+... ...++++|++.|.++|++++ .+++|+|.++|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~-~~f~ldDYi~~l~~~i~~~G--~~v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSA-GKFDLEDYIDYLIEFIRFLG--PDIHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhc-CCCCHHHHHHHHHHHHHHhC--CCCcEEEEchh
Confidence 799999888655443 3668888877 8999999998666443222 34699999999999999984 45999999999
Q ss_pred hHHHHHHh-----hhCCCccceEEEEeccC
Q 024469 89 GVTLALAA-----DKFPHKISVAVFVTAFM 113 (267)
Q Consensus 89 G~i~~~~a-----~~~p~~v~~lvli~~~~ 113 (267)
|..++.++ ...|++++.++++.+..
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PI 208 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPI 208 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCc
Confidence 98655443 23477899999999743
No 103
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.05 E-value=2.4e-10 Score=92.78 Aligned_cols=85 Identities=26% Similarity=0.343 Sum_probs=49.4
Q ss_pred ceEEEecCCCC-ChhchHHHHHHHhcCCCe---EEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHH----cCCCCCcEE
Q 024469 10 KHFVLVHGVNH-GAWCWYKLKARLVAGGHR---VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA----SLPAEEKVI 81 (267)
Q Consensus 10 ~~ivlvHG~~~-~~~~w~~~~~~L~~~g~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~----~l~~~~~vi 81 (267)
.|||||||.+. ....|..+.+.|+++||. |+++++-....+.. ........+.+.+|.++|+ .. +- +|-
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~-~~~~~~~~~~~~~l~~fI~~Vl~~T-Ga-kVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPS-VQNAHMSCESAKQLRAFIDAVLAYT-GA-KVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTH-HHHHHB-HHHHHHHHHHHHHHHHHH-T---EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCc-ccccccchhhHHHHHHHHHHHHHhh-CC-EEE
Confidence 59999999998 667899999999999998 79999743332221 1111112233344444444 44 43 999
Q ss_pred EEeeChhhHHHHHHhh
Q 024469 82 LVGHSLGGVTLALAAD 97 (267)
Q Consensus 82 lvGHSmGG~i~~~~a~ 97 (267)
||||||||+++-.+.+
T Consensus 79 IVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIK 94 (219)
T ss_dssp EEEETCHHHHHHHHHH
T ss_pred EEEcCCcCHHHHHHHH
Confidence 9999999997666654
No 104
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.01 E-value=3.9e-08 Score=76.62 Aligned_cols=171 Identities=15% Similarity=0.128 Sum_probs=109.0
Q ss_pred cceEEEecCCCCCh-----hchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCc-ccChHHhhHHHHHHHHcCCCCCc-EE
Q 024469 9 EKHFVLVHGVNHGA-----WCWYKLKARLVAGGHRVTAVDLAASGINMKRIED-VHTFHAYSEPLMEVLASLPAEEK-VI 81 (267)
Q Consensus 9 ~~~ivlvHG~~~~~-----~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~-~~~~~~~~~~l~~~i~~l~~~~~-vi 81 (267)
.+..|.+|=.+... -.=+.++..|.+.||.|+-+|+||.|+|....+. .--++ .+...++++.+.....+ +.
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~-Da~aaldW~~~~hp~s~~~~ 106 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELE-DAAAALDWLQARHPDSASCW 106 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHH-HHHHHHHHHHhhCCCchhhh
Confidence 35567777443211 1233456677789999999999999999865432 22333 33445577776644344 47
Q ss_pred EEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechH
Q 024469 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (267)
Q Consensus 82 lvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (267)
|.|.|.|+.|++.+|.++|+- .++++...+ .+ . .
T Consensus 107 l~GfSFGa~Ia~~la~r~~e~---~~~is~~p~-----------------------------------~~-----~--~- 140 (210)
T COG2945 107 LAGFSFGAYIAMQLAMRRPEI---LVFISILPP-----------------------------------IN-----A--Y- 140 (210)
T ss_pred hcccchHHHHHHHHHHhcccc---cceeeccCC-----------------------------------CC-----c--h-
Confidence 899999999999999887652 111111000 00 0 0
Q ss_pred HHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEec
Q 024469 162 FLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIK 241 (267)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~ 241 (267)
..+...+ ...|.++|+|+.|.++++...-...+. ..-++++++
T Consensus 141 -----------------dfs~l~P-------------------~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~ 183 (210)
T COG2945 141 -----------------DFSFLAP-------------------CPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIP 183 (210)
T ss_pred -----------------hhhhccC-------------------CCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEec
Confidence 0011111 156889999999999988766555554 334678899
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHH
Q 024469 242 GGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 242 ~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
++.|+.+ .+-..+.+.+.+|+.
T Consensus 184 ~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 184 GADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred CCCceec-ccHHHHHHHHHHHhh
Confidence 9999974 566788888888874
No 105
>COG0400 Predicted esterase [General function prediction only]
Probab=99.01 E-value=6.1e-09 Score=83.87 Aligned_cols=165 Identities=15% Similarity=0.125 Sum_probs=102.9
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCC--CCCCCC---CCCCcc-------cChHHhhHHHHHHHHcCC-C
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA--ASGINM---KRIEDV-------HTFHAYSEPLMEVLASLP-A 76 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~--G~G~S~---~~~~~~-------~~~~~~~~~l~~~i~~l~-~ 76 (267)
+.|||+||+|.+...+-.....+..+ ++++.+-=+ -.|.-. +..... .....+++.|.+..++.+ .
T Consensus 19 ~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi~ 97 (207)
T COG0400 19 PLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGID 97 (207)
T ss_pred cEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCCC
Confidence 56999999997777765544444333 556544111 011100 000111 133444455555555553 1
Q ss_pred CCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccce
Q 024469 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISM 156 (267)
Q Consensus 77 ~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (267)
.++++++|+|=|+++++....++|+.++++|+..+..+... .
T Consensus 98 ~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------------------------~------ 139 (207)
T COG0400 98 SSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------------------------E------ 139 (207)
T ss_pred hhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC--------------------------------c------
Confidence 26899999999999999999999999888888765432100 0
Q ss_pred eechHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHc----C
Q 024469 157 LFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQN----Y 232 (267)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~----~ 232 (267)
.. ......|+++++|++|+++|...+.++.+. .
T Consensus 140 --------------------------~~-----------------~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g 176 (207)
T COG0400 140 --------------------------LL-----------------PDLAGTPILLSHGTEDPVVPLALAEALAEYLTASG 176 (207)
T ss_pred --------------------------cc-----------------cccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcC
Confidence 00 001267899999999999999988776543 2
Q ss_pred CCCeEEEecCCCCCCCCCCcHHHHH
Q 024469 233 PVNEVMEIKGGDHMAMLSDPQKLCD 257 (267)
Q Consensus 233 p~~~~~~i~~~gH~~~~e~p~~~~~ 257 (267)
-+.+...++ .||.+..|.-++..+
T Consensus 177 ~~v~~~~~~-~GH~i~~e~~~~~~~ 200 (207)
T COG0400 177 ADVEVRWHE-GGHEIPPEELEAARS 200 (207)
T ss_pred CCEEEEEec-CCCcCCHHHHHHHHH
Confidence 345677888 899986654444443
No 106
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.97 E-value=3e-08 Score=76.21 Aligned_cols=172 Identities=15% Similarity=0.157 Sum_probs=109.3
Q ss_pred cceEEEecCCCC-ChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 9 EKHFVLVHGVNH-GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 9 ~~~ivlvHG~~~-~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
.+.+++|||... +...|+..-+ .+--.+--++++ .+ ...+++++.+.|.+.+.++ . ++++||+||+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we---~~l~~a~rveq~-------~w-~~P~~~dWi~~l~~~v~a~-~-~~~vlVAHSL 68 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWE---SALPNARRVEQD-------DW-EAPVLDDWIARLEKEVNAA-E-GPVVLVAHSL 68 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHH---hhCccchhcccC-------CC-CCCCHHHHHHHHHHHHhcc-C-CCeEEEEecc
Confidence 367999999964 4567855332 221122222222 12 2358899999999999887 3 5799999999
Q ss_pred hhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHHHHHHH
Q 024469 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKI 167 (267)
Q Consensus 88 GG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (267)
|+.++..++.+.-..|+++.|+++.-... . ....
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~~--~--~~~~------------------------------------------ 102 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVSR--P--EIRP------------------------------------------ 102 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCccc--c--ccch------------------------------------------
Confidence 99999999988777999999998642210 0 0000
Q ss_pred hcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCCC
Q 024469 168 YQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMA 247 (267)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~ 247 (267)
...+.... +.. ....-|.++|..++|++++.+.++.+++..+ +.++.+.++||.-
T Consensus 103 ------------~~~~tf~~-----------~p~-~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN 157 (181)
T COG3545 103 ------------KHLMTFDP-----------IPR-EPLPFPSVVVASRNDPYVSYEHAEDLANAWG-SALVDVGEGGHIN 157 (181)
T ss_pred ------------hhccccCC-----------Ccc-ccCCCceeEEEecCCCCCCHHHHHHHHHhcc-Hhheecccccccc
Confidence 00000000 000 0013478999999999999999998887665 5777888889876
Q ss_pred CC---CCcHHHHHHHHHHHH
Q 024469 248 ML---SDPQKLCDCLSQISL 264 (267)
Q Consensus 248 ~~---e~p~~~~~~l~~f~~ 264 (267)
-. +.-.+..+.+.+|..
T Consensus 158 ~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 158 AESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred hhhcCCCcHHHHHHHHHHhh
Confidence 43 223444455555543
No 107
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.95 E-value=7.1e-09 Score=83.39 Aligned_cols=97 Identities=22% Similarity=0.249 Sum_probs=73.7
Q ss_pred EecCCC--CChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHH
Q 024469 14 LVHGVN--HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVT 91 (267)
Q Consensus 14 lvHG~~--~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i 91 (267)
++|..+ .+..+|..+...|.. .++|+++|++|+|.+.... .+++++++.+.+.+.......+++++||||||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 455544 567789999999965 5899999999998765432 3677777777666655434568999999999999
Q ss_pred HHHHhhh---CCCccceEEEEeccCC
Q 024469 92 LALAADK---FPHKISVAVFVTAFMP 114 (267)
Q Consensus 92 ~~~~a~~---~p~~v~~lvli~~~~~ 114 (267)
+...|.+ .++.+.+++++++..+
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~~ 103 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYPP 103 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCCC
Confidence 8877764 4677999999987544
No 108
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.95 E-value=2.7e-09 Score=86.87 Aligned_cols=104 Identities=22% Similarity=0.176 Sum_probs=75.0
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC------CCCCcEEE
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL------PAEEKVIL 82 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l------~~~~~vil 82 (267)
=|.|+|+||+......|..++.+++++||=|+||++-.--..+ ..++..+....++.+.+-+..+ .++.++.|
T Consensus 46 yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~-~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal 124 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPD-GQDEIKSAASVINWLPEGLQHVLPENVEANLSKLAL 124 (307)
T ss_pred ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCC-chHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEE
Confidence 4899999999999999999999999999999999998521111 1112223344444444443333 13468999
Q ss_pred EeeChhhHHHHHHhhhCC--CccceEEEEeccC
Q 024469 83 VGHSLGGVTLALAADKFP--HKISVAVFVTAFM 113 (267)
Q Consensus 83 vGHSmGG~i~~~~a~~~p--~~v~~lvli~~~~ 113 (267)
+|||.||-+|-.+|..+. -+++.||-|+|+.
T Consensus 125 ~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 125 SGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred eecCCccHHHHHHHhcccccCchhheecccccC
Confidence 999999998888887663 3588999999753
No 109
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.91 E-value=9.5e-09 Score=86.51 Aligned_cols=102 Identities=18% Similarity=0.246 Sum_probs=62.6
Q ss_pred cceEEEecCCCCChh---chHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC-------CCC
Q 024469 9 EKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-------AEE 78 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~---~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-------~~~ 78 (267)
...||||-|.+.+-. ....+++.|...+|.|+-+-|.. +...=+..+++..+++|.++|+.|. ..+
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsS----Sy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~ 108 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSS----SYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGRE 108 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GG----GBTTS-S--HHHHHHHHHHHHHHHHHHS------S
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecC----ccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCc
Confidence 358999999986554 35678888977789999887762 2111123477777888777777551 235
Q ss_pred cEEEEeeChhhHHHHHHhhhC-C----CccceEEEEeccCC
Q 024469 79 KVILVGHSLGGVTLALAADKF-P----HKISVAVFVTAFMP 114 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~~~-p----~~v~~lvli~~~~~ 114 (267)
+++|+|||-|.--++.|.... + ..|++.|+-+|+-.
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 899999999999777775443 3 67999999998643
No 110
>PRK10115 protease 2; Provisional
Probab=98.91 E-value=6.4e-08 Score=91.83 Aligned_cols=104 Identities=16% Similarity=0.186 Sum_probs=77.8
Q ss_pred cceEEEecCCCCChh--chHHHHHHHhcCCCeEEEeCCCCCCCCCCC-------CCcccChHHhhHHHHHHHHcC-CCCC
Q 024469 9 EKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMKR-------IEDVHTFHAYSEPLMEVLASL-PAEE 78 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~--~w~~~~~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~~~~l~~~i~~l-~~~~ 78 (267)
.|.||.+||.+..+. .|......|.++||-|+.++.||.|.=++. .....+++|+.+.+..+++.= -.-+
T Consensus 445 ~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~ 524 (686)
T PRK10115 445 NPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPS 524 (686)
T ss_pred CCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChH
Confidence 489999999876663 465556677789999999999996643321 112247777777776666532 0125
Q ss_pred cEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
++.+.|-|.||..+..++.++|++++++|...++
T Consensus 525 rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 525 LCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred HeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 8999999999998888888999999999987764
No 111
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.90 E-value=4.2e-08 Score=79.60 Aligned_cols=94 Identities=22% Similarity=0.292 Sum_probs=55.6
Q ss_pred EEEecCCC---CChhchHHHHHHHh-cCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC-------C-CCCc
Q 024469 12 FVLVHGVN---HGAWCWYKLKARLV-AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-------P-AEEK 79 (267)
Q Consensus 12 ivlvHG~~---~~~~~w~~~~~~L~-~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l-------~-~~~~ 79 (267)
||++||-+ .+......+...|+ +.|+.|+.+|.|=.- ..++.+..+|+.+.++.+ + ..++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p--------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAP--------EAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TT--------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccc--------cccccccccccccceeeeccccccccccccc
Confidence 78999875 22222233444454 479999999998221 123334444444433322 1 2358
Q ss_pred EEEEeeChhhHHHHHHhhhCCC----ccceEEEEeccC
Q 024469 80 VILVGHSLGGVTLALAADKFPH----KISVAVFVTAFM 113 (267)
Q Consensus 80 vilvGHSmGG~i~~~~a~~~p~----~v~~lvli~~~~ 113 (267)
++|+|+|-||.+++.++....+ .++++++++|+.
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999988888755433 488999999853
No 112
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.90 E-value=1.4e-07 Score=81.35 Aligned_cols=208 Identities=17% Similarity=0.112 Sum_probs=103.9
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCC-CCCCC--------Cc-ccChHH---------hhHH---H
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGI-NMKRI--------ED-VHTFHA---------YSEP---L 67 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~-S~~~~--------~~-~~~~~~---------~~~~---l 67 (267)
|.||..||.+.+...|...+. ++..||-|+++|.+|.|. |.... +. ...+++ ...| .
T Consensus 84 Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ra 162 (320)
T PF05448_consen 84 PAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRA 162 (320)
T ss_dssp EEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHH
T ss_pred CEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHH
Confidence 788999999988888877664 567899999999999993 32110 00 011222 1122 2
Q ss_pred HHHHHcCCC--CCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccc
Q 024469 68 MEVLASLPA--EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQ 145 (267)
Q Consensus 68 ~~~i~~l~~--~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (267)
++++..+.. .+++.+.|.|.||.+++.+|.-. ++|++++...|+.-. ......... ...++
T Consensus 163 vd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd-~rv~~~~~~vP~l~d--------~~~~~~~~~-~~~~y------- 225 (320)
T PF05448_consen 163 VDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD-PRVKAAAADVPFLCD--------FRRALELRA-DEGPY------- 225 (320)
T ss_dssp HHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-ST-SEEEEESESSSS--------HHHHHHHT---STTT-------
T ss_pred HHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC-ccccEEEecCCCccc--------hhhhhhcCC-ccccH-------
Confidence 344455532 25899999999999888777655 469998887765321 111111000 00000
Q ss_pred cCCCCCCccceeechHHHHHHHh-cCCChH-HHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChH
Q 024469 146 CDASNPSHISMLFGREFLTIKIY-QLCPPE-DLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQ 223 (267)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~ 223 (267)
..+...+- .....+ ..+....+. + ++.... +...++|+++-.|-.|.++||.
T Consensus 226 ---------------~~~~~~~~~~d~~~~~~~~v~~~L~----Y-~D~~nf------A~ri~~pvl~~~gl~D~~cPP~ 279 (320)
T PF05448_consen 226 ---------------PEIRRYFRWRDPHHEREPEVFETLS----Y-FDAVNF------ARRIKCPVLFSVGLQDPVCPPS 279 (320)
T ss_dssp ---------------HHHHHHHHHHSCTHCHHHHHHHHHH----T-T-HHHH------GGG--SEEEEEEETT-SSS-HH
T ss_pred ---------------HHHHHHHhccCCCcccHHHHHHHHh----h-hhHHHH------HHHcCCCEEEEEecCCCCCCch
Confidence 00111110 000000 001111110 0 010000 1234899999999999999999
Q ss_pred HHHHHHHcCC-CCeEEEecCCCCCCCCCCcHHH-HHHHHHHHHh
Q 024469 224 FQHWMIQNYP-VNEVMEIKGGDHMAMLSDPQKL-CDCLSQISLK 265 (267)
Q Consensus 224 ~~~~~~~~~p-~~~~~~i~~~gH~~~~e~p~~~-~~~l~~f~~~ 265 (267)
.+-..-+.++ ..++.+++..||... .++ .+...+|+++
T Consensus 280 t~fA~yN~i~~~K~l~vyp~~~He~~----~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 280 TQFAAYNAIPGPKELVVYPEYGHEYG----PEFQEDKQLNFLKE 319 (320)
T ss_dssp HHHHHHCC--SSEEEEEETT--SSTT----HHHHHHHHHHHHHH
T ss_pred hHHHHHhccCCCeeEEeccCcCCCch----hhHHHHHHHHHHhc
Confidence 8877776666 457899999999764 334 5555566654
No 113
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.90 E-value=9.8e-10 Score=95.04 Aligned_cols=109 Identities=21% Similarity=0.260 Sum_probs=63.9
Q ss_pred CccceEEEecCCCCCh--hch-HHHHHH-Hhc--CCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC----C-
Q 024469 7 MEEKHFVLVHGVNHGA--WCW-YKLKAR-LVA--GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----P- 75 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~--~~w-~~~~~~-L~~--~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l----~- 75 (267)
.+.+++++||||..+. ..| ..+... |.. ..++||++|+... .+..-..........+..|..+|..| +
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~-a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRG-ASNNYPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHH-HSS-HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhh-ccccccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 4578999999998766 355 334443 443 4689999998521 11100000012223333444444433 1
Q ss_pred CCCcEEEEeeChhhHHHHHHhhhCCC--ccceEEEEeccCCCC
Q 024469 76 AEEKVILVGHSLGGVTLALAADKFPH--KISVAVFVTAFMPDT 116 (267)
Q Consensus 76 ~~~~vilvGHSmGG~i~~~~a~~~p~--~v~~lvli~~~~~~~ 116 (267)
..++++||||||||.++..++..... +|.+++-+||+.|..
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 34699999999999999999888877 999999999987753
No 114
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.77 E-value=2.1e-06 Score=69.61 Aligned_cols=206 Identities=16% Similarity=0.141 Sum_probs=101.8
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCC-CCCCCCCCcccChHHhhHHHHHHHHcC--CCCCcEEEEee
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS-GINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVGH 85 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~-G~S~~~~~~~~~~~~~~~~l~~~i~~l--~~~~~vilvGH 85 (267)
.++||+..||+-....+..++.+|+..||+|+-+|-.-| |.|+... ..++++.-.++|..+++.+ .+..++-||.-
T Consensus 30 ~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I-~eftms~g~~sL~~V~dwl~~~g~~~~GLIAa 108 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI-NEFTMSIGKASLLTVIDWLATRGIRRIGLIAA 108 (294)
T ss_dssp S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHHHHHHHHHTT---EEEEEE
T ss_pred CCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh-hhcchHHhHHHHHHHHHHHHhcCCCcchhhhh
Confidence 479999999999999999999999999999999998887 8887654 3478888877777666655 24568999999
Q ss_pred ChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCc-cceeechH-HH
Q 024469 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSH-ISMLFGRE-FL 163 (267)
Q Consensus 86 SmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~ 163 (267)
|+.|=+|...|.+. .+.-||+.-+++. .....++... ..++....... + +..- ..--.+.+ |+
T Consensus 109 SLSaRIAy~Va~~i--~lsfLitaVGVVn-----lr~TLe~al~------~Dyl~~~i~~l-p-~dldfeGh~l~~~vFv 173 (294)
T PF02273_consen 109 SLSARIAYEVAADI--NLSFLITAVGVVN-----LRDTLEKALG------YDYLQLPIEQL-P-EDLDFEGHNLGAEVFV 173 (294)
T ss_dssp TTHHHHHHHHTTTS----SEEEEES--S------HHHHHHHHHS------S-GGGS-GGG----SEEEETTEEEEHHHHH
T ss_pred hhhHHHHHHHhhcc--CcceEEEEeeeee-----HHHHHHHHhc------cchhhcchhhC-C-CcccccccccchHHHH
Confidence 99999999988744 3666666554432 1112222111 11111000000 0 0000 00011111 22
Q ss_pred HHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcC--CCCeEEEec
Q 024469 164 TIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY--PVNEVMEIK 241 (267)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~--p~~~~~~i~ 241 (267)
.+.+..... ++... .......++|.+...+++|.+|.+.....+.+.. +..+++.++
T Consensus 174 ~dc~e~~w~-------------------~l~ST--~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~ 232 (294)
T PF02273_consen 174 TDCFEHGWD-------------------DLDST--INDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLP 232 (294)
T ss_dssp HHHHHTT-S-------------------SHHHH--HHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEET
T ss_pred HHHHHcCCc-------------------cchhH--HHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEec
Confidence 222221111 00000 0001123899999999999999999888888754 456789999
Q ss_pred CCCCCCCCCCc
Q 024469 242 GGDHMAMLSDP 252 (267)
Q Consensus 242 ~~gH~~~~e~p 252 (267)
|++|-+ -|.|
T Consensus 233 Gs~HdL-~enl 242 (294)
T PF02273_consen 233 GSSHDL-GENL 242 (294)
T ss_dssp T-SS-T-TSSH
T ss_pred Cccchh-hhCh
Confidence 999988 3444
No 115
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.75 E-value=2e-07 Score=70.52 Aligned_cols=104 Identities=21% Similarity=0.234 Sum_probs=78.2
Q ss_pred CCccceEEEecCCCCChh--chHHHHHHHhcCCCeEEEeCCCCCCC--CC---CCCCcccChHHhhHHHHHHHHcCCCCC
Q 024469 6 GMEEKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGI--NM---KRIEDVHTFHAYSEPLMEVLASLPAEE 78 (267)
Q Consensus 6 ~~~~~~ivlvHG~~~~~~--~w~~~~~~L~~~g~~via~Dl~G~G~--S~---~~~~~~~~~~~~~~~l~~~i~~l~~~~ 78 (267)
|..-.+|||-||.+.+.. +...+...|+..|+.|.-+.+|-.-. .+ .+.....-...|...+.++...+ ...
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l-~~g 89 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL-AEG 89 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc-cCC
Confidence 333458999999987654 58889999999999999999886321 11 12222234577888888988887 446
Q ss_pred cEEEEeeChhhHHHHHHhhhCCCccceEEEEe
Q 024469 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVT 110 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~ 110 (267)
+.|+-||||||-+++..|..--..|++|++++
T Consensus 90 pLi~GGkSmGGR~aSmvade~~A~i~~L~clg 121 (213)
T COG3571 90 PLIIGGKSMGGRVASMVADELQAPIDGLVCLG 121 (213)
T ss_pred ceeeccccccchHHHHHHHhhcCCcceEEEec
Confidence 99999999999988888765555599999887
No 116
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.74 E-value=3.7e-08 Score=82.00 Aligned_cols=105 Identities=24% Similarity=0.334 Sum_probs=69.6
Q ss_pred ccceEEEecCCCCChhchHHHHHHHh-cCCC--eEEEe--CCCC----CCC---C-CCC------CCcc-cChHHhhHHH
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLV-AGGH--RVTAV--DLAA----SGI---N-MKR------IEDV-HTFHAYSEPL 67 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~-~~g~--~via~--Dl~G----~G~---S-~~~------~~~~-~~~~~~~~~l 67 (267)
...|.|||||++++...+..++..+. ..|. .++.. +--| .|. . ..| .+.. .+....+..|
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 35799999999999999999999997 5543 44332 2223 122 1 111 1122 3677888888
Q ss_pred HHHHHcCC---CCCcEEEEeeChhhHHHHHHhhhCCC-----ccceEEEEecc
Q 024469 68 MEVLASLP---AEEKVILVGHSLGGVTLALAADKFPH-----KISVAVFVTAF 112 (267)
Q Consensus 68 ~~~i~~l~---~~~~vilvGHSmGG~i~~~~a~~~p~-----~v~~lvli~~~ 112 (267)
..++..|. ..+++-+|||||||++++.++..+.. +|.++|.|++.
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~p 142 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGP 142 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccc
Confidence 88888772 45799999999999999988877532 58999999963
No 117
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.74 E-value=1.4e-06 Score=83.59 Aligned_cols=83 Identities=17% Similarity=0.071 Sum_probs=61.4
Q ss_pred HHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCC-------------------CCcEEEEeeChh
Q 024469 28 LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA-------------------EEKVILVGHSLG 88 (267)
Q Consensus 28 ~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~-------------------~~~vilvGHSmG 88 (267)
..+.|..+||.|+..|.||.|.|+.... ... .+-.+|..++|+-+.. ..+|.++|.|||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~-~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPT-TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCc-cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 4567778999999999999999986432 111 3344454445544420 369999999999
Q ss_pred hHHHHHHhhhCCCccceEEEEecc
Q 024469 89 GVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 89 G~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
|.+.+.+|...|..++.+|.+++.
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCCC
Confidence 999998888888889999887754
No 118
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.73 E-value=3.3e-08 Score=77.73 Aligned_cols=182 Identities=16% Similarity=0.161 Sum_probs=107.3
Q ss_pred ccceEEEecCC-C---CChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEE
Q 024469 8 EEKHFVLVHGV-N---HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILV 83 (267)
Q Consensus 8 ~~~~ivlvHG~-~---~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilv 83 (267)
..+.+|||||. | ...-|-..+-+++ .+||+|..++ +|.++....-..++.++..-+.=+++.....+.+++-
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~-~~gY~vasvg---Y~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~g 141 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAV-RRGYRVASVG---YNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFG 141 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhh-hcCeEEEEec---cCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEc
Confidence 35889999986 3 3444566666666 5799999875 3555422111235555555554344444344556667
Q ss_pred eeChhhHHHHHH-hhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCccceeechHH
Q 024469 84 GHSLGGVTLALA-ADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREF 162 (267)
Q Consensus 84 GHSmGG~i~~~~-a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
|||-|+..+..+ +.++.-||.++++.++... .+.+... .. ...
T Consensus 142 GHSaGAHLa~qav~R~r~prI~gl~l~~GvY~---------l~EL~~t-----e~--g~d-------------------- 185 (270)
T KOG4627|consen 142 GHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD---------LRELSNT-----ES--GND-------------------- 185 (270)
T ss_pred ccchHHHHHHHHHHHhcCchHHHHHHHhhHhh---------HHHHhCC-----cc--ccc--------------------
Confidence 999999977766 6667778999999886421 2221100 00 000
Q ss_pred HHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecC
Q 024469 163 LTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKG 242 (267)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~ 242 (267)
.++..++ .+ . .. .++... .-.++|.+++.|++|.---.+..+.+++....+++..|+|
T Consensus 186 -----lgLt~~~-ae---~-~S------cdl~~~------~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n 243 (270)
T KOG4627|consen 186 -----LGLTERN-AE---S-VS------CDLWEY------TDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKN 243 (270)
T ss_pred -----cCcccch-hh---h-cC------ccHHHh------cCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCC
Confidence 0000000 00 0 00 001111 1126789999999997666666777787777889999999
Q ss_pred CCCCCCCCC
Q 024469 243 GDHMAMLSD 251 (267)
Q Consensus 243 ~gH~~~~e~ 251 (267)
.+|.-.+|.
T Consensus 244 ~~hy~I~~~ 252 (270)
T KOG4627|consen 244 YDHYDIIEE 252 (270)
T ss_pred cchhhHHHH
Confidence 999877653
No 119
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.73 E-value=1.5e-06 Score=74.53 Aligned_cols=237 Identities=15% Similarity=0.188 Sum_probs=126.9
Q ss_pred ccceEEEecCCCCChhchHH-H-HHHHhcCCCeEEEeCCCCCCCCCCCCC---cccChHHhh----------HHHHHHHH
Q 024469 8 EEKHFVLVHGVNHGAWCWYK-L-KARLVAGGHRVTAVDLAASGINMKRIE---DVHTFHAYS----------EPLMEVLA 72 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~-~-~~~L~~~g~~via~Dl~G~G~S~~~~~---~~~~~~~~~----------~~l~~~i~ 72 (267)
.++..|.+.|.+.+.+..+. + +..|.+.|...+.+..|-||.-..... ...++.|+- ..|..+++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 35778899999987765444 2 455555699999999999996432211 112333332 34566677
Q ss_pred cCCCCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccc--ccccc--ccCC
Q 024469 73 SLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWL--DTQFS--QCDA 148 (267)
Q Consensus 73 ~l~~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~ 148 (267)
+. +..++.|.|-||||..|..+|...|..|.-+-++++.....- ..+...+.. ..|- ...+. .+..
T Consensus 171 ~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~v-----Ft~Gvls~~----i~W~~L~~q~~~~~~~~ 240 (348)
T PF09752_consen 171 RE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVV-----FTEGVLSNS----INWDALEKQFEDTVYEE 240 (348)
T ss_pred hc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcc-----hhhhhhhcC----CCHHHHHHHhcccchhh
Confidence 66 557999999999999999999999998877766664322110 011111100 1110 00000 0000
Q ss_pred CCCCccceeechHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHH
Q 024469 149 SNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWM 228 (267)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~ 228 (267)
................ ... ...+.+..+.+... .+.+.....+.. ....=.+.+|.+++|..+|......+
T Consensus 241 -~~~~~~~~~~~~~~~~-~~~--~~~~~Ea~~~m~~~----md~~T~l~nf~~-P~dp~~ii~V~A~~DaYVPr~~v~~L 311 (348)
T PF09752_consen 241 -EISDIPAQNKSLPLDS-MEE--RRRDREALRFMRGV----MDSFTHLTNFPV-PVDPSAIIFVAAKNDAYVPRHGVLSL 311 (348)
T ss_pred -hhcccccCcccccchh-hcc--ccchHHHHHHHHHH----HHhhccccccCC-CCCCCcEEEEEecCceEechhhcchH
Confidence 0000000000000000 000 00011111111100 000000001110 00011367789999999999888889
Q ss_pred HHcCCCCeEEEecCCCCCC-CCCCcHHHHHHHHHHHH
Q 024469 229 IQNYPVNEVMEIKGGDHMA-MLSDPQKLCDCLSQISL 264 (267)
Q Consensus 229 ~~~~p~~~~~~i~~~gH~~-~~e~p~~~~~~l~~f~~ 264 (267)
.+..|++++..+++ ||-. ++-+.+.|.++|.+-++
T Consensus 312 q~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 312 QEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred HHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 99999999999984 9964 55778999999987654
No 120
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.72 E-value=2.6e-08 Score=87.97 Aligned_cols=104 Identities=18% Similarity=0.305 Sum_probs=58.0
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCC-CCCCC-----CCC---CC---------------cc-----c--
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA-ASGIN-----MKR---IE---------------DV-----H-- 58 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~-G~G~S-----~~~---~~---------------~~-----~-- 58 (267)
|.|||-||++.+...|..+...|+++||=|+++|+| |.+-. +.. .. +. +
T Consensus 101 PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (379)
T PF03403_consen 101 PVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFEL 180 (379)
T ss_dssp EEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHHH
T ss_pred CEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHHH
Confidence 899999999999999999999999999999999999 43321 100 00 00 0
Q ss_pred ---ChHHhhHHH---HHHHHcC--C--------------------CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEe
Q 024469 59 ---TFHAYSEPL---MEVLASL--P--------------------AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVT 110 (267)
Q Consensus 59 ---~~~~~~~~l---~~~i~~l--~--------------------~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~ 110 (267)
.+..-++++ .++++.+ + ..++++++|||+||+.+..++.+. .+++..|++|
T Consensus 181 R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD 259 (379)
T PF03403_consen 181 RNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILLD 259 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEeC
Confidence 111112222 2333221 0 124799999999999877766444 7899999999
Q ss_pred ccCC
Q 024469 111 AFMP 114 (267)
Q Consensus 111 ~~~~ 114 (267)
+++.
T Consensus 260 ~W~~ 263 (379)
T PF03403_consen 260 PWMF 263 (379)
T ss_dssp ---T
T ss_pred Cccc
Confidence 9764
No 121
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.71 E-value=2.1e-06 Score=74.17 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=63.5
Q ss_pred ccceEEEecCCC---CChhch-HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHc---CC-CCCc
Q 024469 8 EEKHFVLVHGVN---HGAWCW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS---LP-AEEK 79 (267)
Q Consensus 8 ~~~~ivlvHG~~---~~~~~w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~---l~-~~~~ 79 (267)
+.+.||++||.+ .+.... ..+...+...|+.|+++|+|=.-+-..+ ..+++..+.+.-+.+. ++ ..++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p----~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFP----AALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCC----chHHHHHHHHHHHHhhhHhhCCCccc
Confidence 368999999885 233333 5666666778999999999842222111 1333322222222222 21 1368
Q ss_pred EEEEeeChhhHHHHHHhhhCCC----ccceEEEEeccC
Q 024469 80 VILVGHSLGGVTLALAADKFPH----KISVAVFVTAFM 113 (267)
Q Consensus 80 vilvGHSmGG~i~~~~a~~~p~----~v~~lvli~~~~ 113 (267)
++|.|||-||..++.++..-.+ .....+++.++.
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence 9999999999988877655433 457888888754
No 122
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.67 E-value=1.1e-07 Score=78.40 Aligned_cols=107 Identities=16% Similarity=0.159 Sum_probs=65.0
Q ss_pred ccceEEEecCCCCChhch-HHHHHHHhcCCC--eEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC---CCCcEE
Q 024469 8 EEKHFVLVHGVNHGAWCW-YKLKARLVAGGH--RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVI 81 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w-~~~~~~L~~~g~--~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~vi 81 (267)
.+..+|||||+..+...- +...+.....++ .++.+.+|+.|.-..-..+..+...-+..+.++|+.|. ..++++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 467999999998765432 122222222223 79999999887532111111233344445555555542 457999
Q ss_pred EEeeChhhHHHHHHhhh----CC-----CccceEEEEeccCC
Q 024469 82 LVGHSLGGVTLALAADK----FP-----HKISVAVFVTAFMP 114 (267)
Q Consensus 82 lvGHSmGG~i~~~~a~~----~p-----~~v~~lvli~~~~~ 114 (267)
|++||||+-+...+... .+ .+|..+|+++|-.+
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 99999999977765322 21 36788999886443
No 123
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.66 E-value=7.7e-08 Score=83.77 Aligned_cols=100 Identities=26% Similarity=0.274 Sum_probs=74.8
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCe---EEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEee
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHR---VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGH 85 (267)
.-|+|++||...+...|..+-..++..|+. ++++++++. ....+ ....-+.+...|.+++... +-+++.||||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~--~~~~~~ql~~~V~~~l~~~-ga~~v~LigH 134 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYS--LAVRGEQLFAYVDEVLAKT-GAKKVNLIGH 134 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCcc--ccccHHHHHHHHHHHHhhc-CCCceEEEee
Confidence 359999999988888887777777777776 889998865 11111 1224455555566666555 4479999999
Q ss_pred ChhhHHHHHHhhhCC--CccceEEEEecc
Q 024469 86 SLGGVTLALAADKFP--HKISVAVFVTAF 112 (267)
Q Consensus 86 SmGG~i~~~~a~~~p--~~v~~lvli~~~ 112 (267)
||||..+-.++...+ .+|..++.+++.
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccC
Confidence 999999998888888 899999999863
No 124
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.61 E-value=7.7e-08 Score=78.65 Aligned_cols=85 Identities=21% Similarity=0.257 Sum_probs=49.3
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcC--CCeEEEeCCCCCCCCCCCCCcccChHHhh----HHHHHHHHcCCCC-CcEEE
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAG--GHRVTAVDLAASGINMKRIEDVHTFHAYS----EPLMEVLASLPAE-EKVIL 82 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~--g~~via~Dl~G~G~S~~~~~~~~~~~~~~----~~l~~~i~~l~~~-~~vil 82 (267)
--||||||++.+...|+.+...|... .+.-..+...++-... .....+++..+ ++|.+.++..... .++++
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Isf 82 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIRKISF 82 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccccceE
Confidence 47999999999999998888877551 1211122222221111 11112445444 4444544444222 47999
Q ss_pred EeeChhhHHHHHHh
Q 024469 83 VGHSLGGVTLALAA 96 (267)
Q Consensus 83 vGHSmGG~i~~~~a 96 (267)
|||||||.++-.+.
T Consensus 83 IgHSLGGli~r~al 96 (217)
T PF05057_consen 83 IGHSLGGLIARYAL 96 (217)
T ss_pred EEecccHHHHHHHH
Confidence 99999999765543
No 125
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.60 E-value=4.2e-07 Score=75.22 Aligned_cols=159 Identities=18% Similarity=0.135 Sum_probs=109.1
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCC-CCCCCCCC-----cc-----cChHHhhHHHHHHHHcCC---
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS-GINMKRIE-----DV-----HTFHAYSEPLMEVLASLP--- 75 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~-G~S~~~~~-----~~-----~~~~~~~~~l~~~i~~l~--- 75 (267)
|.||++|+++.-....+.+.+.|+..||.|++||+-+. |.+....+ .. .+......|+.+.++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 89999999987777899999999999999999999973 43321110 00 122556666666666652
Q ss_pred --CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCc
Q 024469 76 --AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSH 153 (267)
Q Consensus 76 --~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
..+++.++|.||||.+++.+|.+.| +|++.|.--+.. . . ...
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~-----------------------------~----~-~~~- 151 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGL-----------------------------I----A-DDT- 151 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCC-----------------------------C----C-Ccc-
Confidence 2357999999999999999997766 555544321100 0 0 000
Q ss_pred cceeechHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHHHHcC-
Q 024469 154 ISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY- 232 (267)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~- 232 (267)
. . ....++|+++.+++.|..+|.+....+.+..
T Consensus 152 ------------------~--~--------------------------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~ 185 (236)
T COG0412 152 ------------------A--D--------------------------APKIKVPVLLHLAGEDPYIPAADVDALAAALE 185 (236)
T ss_pred ------------------c--c--------------------------cccccCcEEEEecccCCCCChhHHHHHHHHHH
Confidence 0 0 0112789999999999999988776665433
Q ss_pred ---CCCeEEEecCCCCCCCCC
Q 024469 233 ---PVNEVMEIKGGDHMAMLS 250 (267)
Q Consensus 233 ---p~~~~~~i~~~gH~~~~e 250 (267)
...++.+++++.|..+-+
T Consensus 186 ~~~~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 186 DAGVKVDLEIYPGAGHGFAND 206 (236)
T ss_pred hcCCCeeEEEeCCCccccccC
Confidence 256789999999998855
No 126
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.59 E-value=5.2e-07 Score=73.53 Aligned_cols=46 Identities=17% Similarity=0.245 Sum_probs=32.6
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcCCC-CeEEEecCCCCCCCCCCc
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPV-NEVMEIKGGDHMAMLSDP 252 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~gH~~~~e~p 252 (267)
++|++.|+|++|.+++++.++.+.+.... .+++..+ .||.++...+
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 88999999999999999988888877655 7788887 8999987654
No 127
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.56 E-value=4.5e-06 Score=73.73 Aligned_cols=105 Identities=22% Similarity=0.269 Sum_probs=72.7
Q ss_pred ccceEEEecCCCCChhchHH------HHHHHhcCCCeEEEeCCCCCCCCCCC----C--Cc---ccChHHhhH-HHH---
Q 024469 8 EEKHFVLVHGVNHGAWCWYK------LKARLVAGGHRVTAVDLAASGINMKR----I--ED---VHTFHAYSE-PLM--- 68 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~------~~~~L~~~g~~via~Dl~G~G~S~~~----~--~~---~~~~~~~~~-~l~--- 68 (267)
.+|||+|.||...++..|-. +.=.|+++||.|=.-..||--.|.+. . .. ..++++++. ||-
T Consensus 72 ~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~I 151 (403)
T KOG2624|consen 72 KRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMI 151 (403)
T ss_pred CCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHH
Confidence 46999999999999998843 44457889999999999995555421 1 00 013333332 222
Q ss_pred -HHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCC---ccceEEEEeccC
Q 024469 69 -EVLASLPAEEKVILVGHSLGGVTLALAADKFPH---KISVAVFVTAFM 113 (267)
Q Consensus 69 -~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~---~v~~lvli~~~~ 113 (267)
-+++.. +-++++.||||-|+.+...+...+|+ +|+..++++|++
T Consensus 152 dyIL~~T-~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 152 DYILEKT-GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHhc-cccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 223333 34799999999999977766666654 799999999865
No 128
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.56 E-value=1.7e-06 Score=75.40 Aligned_cols=100 Identities=19% Similarity=0.287 Sum_probs=72.7
Q ss_pred cceEEEecCCCCChhchH-----HHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhh-HHHHHHHHc---CCCCCc
Q 024469 9 EKHFVLVHGVNHGAWCWY-----KLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYS-EPLMEVLAS---LPAEEK 79 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~-----~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~-~~l~~~i~~---l~~~~~ 79 (267)
+.|+++||=+-...+.|. ..+..|.++|+.|..+|+++-..+.. ..++++|. +.+.+.|+. ..+.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 579999999877666653 25666778899999999987555543 24677777 444433332 224479
Q ss_pred EEEEeeChhhHHHHHHhhhCCCc-cceEEEEecc
Q 024469 80 VILVGHSLGGVTLALAADKFPHK-ISVAVFVTAF 112 (267)
Q Consensus 80 vilvGHSmGG~i~~~~a~~~p~~-v~~lvli~~~ 112 (267)
+.++||+.||.....++..++.+ |+.++++.+.
T Consensus 183 InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~ 216 (445)
T COG3243 183 INLIGYCVGGTLLAAALALMAAKRIKSLTLLTSP 216 (445)
T ss_pred cceeeEecchHHHHHHHHhhhhcccccceeeecc
Confidence 99999999999877776667766 9999988763
No 129
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.42 E-value=1.2e-06 Score=74.07 Aligned_cols=104 Identities=18% Similarity=0.144 Sum_probs=66.5
Q ss_pred cceEEEecCCCCCh-hchHHH---------HHHHhcCCCeEEEeCCCCCCCCCCCCCc-ccChHHhhHHHHHHHHcCC-C
Q 024469 9 EKHFVLVHGVNHGA-WCWYKL---------KARLVAGGHRVTAVDLAASGINMKRIED-VHTFHAYSEPLMEVLASLP-A 76 (267)
Q Consensus 9 ~~~ivlvHG~~~~~-~~w~~~---------~~~L~~~g~~via~Dl~G~G~S~~~~~~-~~~~~~~~~~l~~~i~~l~-~ 76 (267)
-|+||..|+.+.+. ..+... ...|.++||-|+..|.||.|.|+..... ...=.+...++++++.+.. -
T Consensus 20 ~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpws 99 (272)
T PF02129_consen 20 FPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPWS 99 (272)
T ss_dssp EEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTTE
T ss_pred ccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCCCC
Confidence 47888888888543 222221 1127789999999999999999864322 1111223334445555541 1
Q ss_pred CCcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 77 ~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
..+|-++|.|++|.+...+|...|..++.++...+.
T Consensus 100 ~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~ 135 (272)
T PF02129_consen 100 NGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGW 135 (272)
T ss_dssp EEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-
T ss_pred CCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccC
Confidence 248999999999999999988888899999888764
No 130
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.38 E-value=1.6e-06 Score=75.20 Aligned_cols=102 Identities=22% Similarity=0.192 Sum_probs=59.4
Q ss_pred cceEEEecCCCCChhc--------------h----HHHHHHHhcCCCeEEEeCCCCCCCCCCCCC----cccChHHhhH-
Q 024469 9 EKHFVLVHGVNHGAWC--------------W----YKLKARLVAGGHRVTAVDLAASGINMKRIE----DVHTFHAYSE- 65 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~--------------w----~~~~~~L~~~g~~via~Dl~G~G~S~~~~~----~~~~~~~~~~- 65 (267)
-|.||++||.+.+... | +.+...|+++||-|+++|.+|+|....... ..++-+..+.
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 4799999998765421 1 235778999999999999999997543221 1111122221
Q ss_pred -----------------HHHHHHHcCCCC--CcEEEEeeChhhHHHHHHhhhCCCccceEEEEec
Q 024469 66 -----------------PLMEVLASLPAE--EKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 66 -----------------~l~~~i~~l~~~--~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
.+++++..+... +++.++|+||||..++.+|.. -+||...|..+.
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL-DdRIka~v~~~~ 258 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL-DDRIKATVANGY 258 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc-chhhHhHhhhhh
Confidence 255666666432 479999999999987777643 468877777653
No 131
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.37 E-value=5.8e-05 Score=61.56 Aligned_cols=104 Identities=16% Similarity=0.121 Sum_probs=62.0
Q ss_pred cceEEEecCCCCChhchHHH--HHHHh-cCCCeEEEeCCCCCCCCCC--C------CCcccChHHhhHHHHHHHHcCC-C
Q 024469 9 EKHFVLVHGVNHGAWCWYKL--KARLV-AGGHRVTAVDLAASGINMK--R------IEDVHTFHAYSEPLMEVLASLP-A 76 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~--~~~L~-~~g~~via~Dl~G~G~S~~--~------~~~~~~~~~~~~~l~~~i~~l~-~ 76 (267)
-|.||++||.+.++..+... ...|+ ++||-|+.|+-........ . .....+....++-+..+++... .
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 37899999999888755331 12343 3467777787542111100 0 0000111111122222222221 2
Q ss_pred CCcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 77 ~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
.++|.+.|+|.||+.+..++..+|++|.++...++.
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 258999999999999999999999999998888764
No 132
>PRK04940 hypothetical protein; Provisional
Probab=98.35 E-value=2e-06 Score=67.36 Aligned_cols=84 Identities=14% Similarity=0.198 Sum_probs=51.1
Q ss_pred EEEecCCCCChhc--hHHHHHHHh--cCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC-CC--CCcEEEEe
Q 024469 12 FVLVHGVNHGAWC--WYKLKARLV--AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-PA--EEKVILVG 84 (267)
Q Consensus 12 ivlvHG~~~~~~~--w~~~~~~L~--~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l-~~--~~~vilvG 84 (267)
|+.+|||.+++.+ .+. ..|+ .-..+++ +++ +.. ..+.+ +.+.+.|..+ .. .+++.|||
T Consensus 2 IlYlHGF~SS~~S~~~Ka--~~l~~~~p~~~~~--~l~----~~~---P~~a~----~~l~~~i~~~~~~~~~~~~~liG 66 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKV--LQLQFIDPDVRLI--SYS----TLH---PKHDM----QHLLKEVDKMLQLSDDERPLICG 66 (180)
T ss_pred EEEeCCCCCCCCccHHHH--HhheeeCCCCeEE--ECC----CCC---HHHHH----HHHHHHHHHhhhccCCCCcEEEE
Confidence 7899999998887 522 2232 1123444 333 011 11122 2344444422 11 15799999
Q ss_pred eChhhHHHHHHhhhCCCccceEEEEeccC
Q 024469 85 HSLGGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 85 HSmGG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
+||||.-|..+|.++. -+.|+|+|.+
T Consensus 67 SSLGGyyA~~La~~~g---~~aVLiNPAv 92 (180)
T PRK04940 67 VGLGGYWAERIGFLCG---IRQVIFNPNL 92 (180)
T ss_pred eChHHHHHHHHHHHHC---CCEEEECCCC
Confidence 9999999999998876 2678888765
No 133
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.33 E-value=1.8e-05 Score=65.18 Aligned_cols=195 Identities=19% Similarity=0.149 Sum_probs=107.7
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCC----CCC----------------ccc---ChHHhhH
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMK----RIE----------------DVH---TFHAYSE 65 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~----~~~----------------~~~---~~~~~~~ 65 (267)
-|.||=-||-+.+.+.|..+.- ++..||-|+++|-||.|.|.. +.. +.| .+-..+-
T Consensus 83 ~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~ 161 (321)
T COG3458 83 LPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAV 161 (321)
T ss_pred cceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHH
Confidence 3788889999999988877663 567899999999999987622 111 111 1111122
Q ss_pred HHHHHHHcCCC--CCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccc
Q 024469 66 PLMEVLASLPA--EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQF 143 (267)
Q Consensus 66 ~l~~~i~~l~~--~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (267)
.+.+++..|.. .+++.+-|-|-||.+++.+|. ...||++++.+=|+.. .. +.|+...
T Consensus 162 ~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaa-l~~rik~~~~~~Pfl~---df----------------~r~i~~~- 220 (321)
T COG3458 162 RAVEILASLDEVDEERIGVTGGSQGGGLALAAAA-LDPRIKAVVADYPFLS---DF----------------PRAIELA- 220 (321)
T ss_pred HHHHHHhccCccchhheEEeccccCchhhhhhhh-cChhhhcccccccccc---cc----------------hhheeec-
Confidence 22333333432 258999999999998777664 4457888876544321 10 1111110
Q ss_pred cccCCCCCCccceeechHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChH
Q 024469 144 SQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQ 223 (267)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~ 223 (267)
...+ ...+...+....+.+. +...-+ +.+ + ... + +...++|.++..|-.|+++||.
T Consensus 221 ------~~~~------ydei~~y~k~h~~~e~-~v~~TL----~yf-D-~~n---~--A~RiK~pvL~svgL~D~vcpPs 276 (321)
T COG3458 221 ------TEGP------YDEIQTYFKRHDPKEA-EVFETL----SYF-D-IVN---L--AARIKVPVLMSVGLMDPVCPPS 276 (321)
T ss_pred ------ccCc------HHHHHHHHHhcCchHH-HHHHHH----hhh-h-hhh---H--HHhhccceEEeecccCCCCCCh
Confidence 0000 0011111111111110 111000 000 0 000 0 1223889999999999999999
Q ss_pred HHHHHHHcCCCC-eEEEecCCCCCCCC
Q 024469 224 FQHWMIQNYPVN-EVMEIKGGDHMAML 249 (267)
Q Consensus 224 ~~~~~~~~~p~~-~~~~i~~~gH~~~~ 249 (267)
.+=.+.+.+++. ++.+++.-+|.-.-
T Consensus 277 tqFA~yN~l~~~K~i~iy~~~aHe~~p 303 (321)
T COG3458 277 TQFAAYNALTTSKTIEIYPYFAHEGGP 303 (321)
T ss_pred hhHHHhhcccCCceEEEeeccccccCc
Confidence 887777777765 46677777776543
No 134
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.29 E-value=2.7e-06 Score=73.18 Aligned_cols=90 Identities=28% Similarity=0.255 Sum_probs=62.5
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCC--CCCCCCC------------CcccChHHhhHHHHHH-----
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS--GINMKRI------------EDVHTFHAYSEPLMEV----- 70 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~--G~S~~~~------------~~~~~~~~~~~~l~~~----- 70 (267)
|.|||-||.+.....+..+.+.|++.||-|.++|+||. |..+... +..+++....+.|.+.
T Consensus 72 PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~ 151 (365)
T COG4188 72 PLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPA 151 (365)
T ss_pred CeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcc
Confidence 78899999999999999999999999999999999994 3333211 1122344444444443
Q ss_pred HHcCCCCCcEEEEeeChhhHHHHHHhhhC
Q 024469 71 LASLPAEEKVILVGHSLGGVTLALAADKF 99 (267)
Q Consensus 71 i~~l~~~~~vilvGHSmGG~i~~~~a~~~ 99 (267)
+..--...+|.++|||+||..++..+...
T Consensus 152 l~~~ld~~~Vgv~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 152 LAGRLDPQRVGVLGHSFGGYTAMELAGAE 180 (365)
T ss_pred cccccCccceEEEecccccHHHHHhcccc
Confidence 11000224899999999999888876543
No 135
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.29 E-value=2.7e-06 Score=75.64 Aligned_cols=83 Identities=23% Similarity=0.301 Sum_probs=59.8
Q ss_pred ChhchHHHHHHHhcCCCeE----E-E-eCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC--CCCCcEEEEeeChhhHHH
Q 024469 21 GAWCWYKLKARLVAGGHRV----T-A-VDLAASGINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVGHSLGGVTL 92 (267)
Q Consensus 21 ~~~~w~~~~~~L~~~g~~v----i-a-~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l--~~~~~vilvGHSmGG~i~ 92 (267)
+.+.|..+++.|++.||+. . + +|+|= | . ...+.+...|.+.|+.. ..+++|+||||||||.++
T Consensus 63 ~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~---~---~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 63 GYWYFAKLIENLEKLGYDRGKDLFAAPYDWRL---S---P---AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVA 133 (389)
T ss_pred ccchHHHHHHHHHhcCcccCCEEEEEeechhh---c---h---hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHH
Confidence 3347999999999888733 2 3 67761 1 1 13457777777777655 135799999999999999
Q ss_pred HHHhhhCCC------ccceEEEEecc
Q 024469 93 ALAADKFPH------KISVAVFVTAF 112 (267)
Q Consensus 93 ~~~a~~~p~------~v~~lvli~~~ 112 (267)
..+....+. .|+++|.+++.
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCC
Confidence 888766643 59999999963
No 136
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.28 E-value=0.00015 Score=59.10 Aligned_cols=246 Identities=12% Similarity=0.151 Sum_probs=134.0
Q ss_pred cCCccceEEEecCCCCChhchHHHHHHHhcC---CCeEEEeCCCCCCCCC---C-----CCCcccChHHhhHHHHHHHHc
Q 024469 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAG---GHRVTAVDLAASGINM---K-----RIEDVHTFHAYSEPLMEVLAS 73 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~---g~~via~Dl~G~G~S~---~-----~~~~~~~~~~~~~~l~~~i~~ 73 (267)
.|...+-|++|.|.+.....|..+...|-.. +.+|..+...||-.-+ + ...+.+++++.++.=.++|+.
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 4555678899999999999999988888432 2558888777875432 1 112457999999999999996
Q ss_pred C-CCCCcEEEEeeChhhHHHHHHhhh-C-CCccceEEEEeccCCCCCCChh-hhHHHHHhhcCCCCcccccccccccCCC
Q 024469 74 L-PAEEKVILVGHSLGGVTLALAADK-F-PHKISVAVFVTAFMPDTTHRPS-FVLEQYSEKMGKEDDSWLDTQFSQCDAS 149 (267)
Q Consensus 74 l-~~~~~vilvGHSmGG~i~~~~a~~-~-p~~v~~lvli~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (267)
- ..+.+++++|||.|+...+....- . --.|.+.+++-|..-.-..++. ..+....... +.-.|+.... ...
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~--~hv~~lt~yi-~~~-- 179 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYL--PHVVSLTSYI-YWI-- 179 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeee--hhhhheeeee-eee--
Confidence 5 445699999999999977776542 2 2357788887764311001100 0000000000 0000000000 000
Q ss_pred CCCccceeechHHHHHHH----hc-CC-ChHHHHHHHHhcCCC-----cccccc-ccccccC-CccCCC-CccEEEEEeC
Q 024469 150 NPSHISMLFGREFLTIKI----YQ-LC-PPEDLELAKMLVRPG-----SMFIDN-LSKESKF-SDEGYG-SVKRVYLVCE 215 (267)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~----~~-~~-~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~-~~~~~~-~iP~l~i~g~ 215 (267)
+-+.+++..+ .. .. +.+-...+..+.++. ....++ +..-... ...... -+-.-+.+|.
T Consensus 180 --------~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt 251 (301)
T KOG3975|consen 180 --------LLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGT 251 (301)
T ss_pred --------cChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccC
Confidence 0111111110 00 00 011000000001100 000000 1000000 000011 1345677899
Q ss_pred CCccCChHHHHHHHHcCCCCeEE-EecCCCCCCCCCCcHHHHHHHHHHH
Q 024469 216 EDIGLPKQFQHWMIQNYPVNEVM-EIKGGDHMAMLSDPQKLCDCLSQIS 263 (267)
Q Consensus 216 ~D~~~~~~~~~~~~~~~p~~~~~-~i~~~gH~~~~e~p~~~~~~l~~f~ 263 (267)
.|.++|.+....+.++.|.-++. --+++-|..-....+..+..+.+.+
T Consensus 252 ~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 252 NDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred CCCCcchHHHHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 99999999999999999966543 2288999999999999998887765
No 137
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.27 E-value=0.0003 Score=60.97 Aligned_cols=101 Identities=23% Similarity=0.247 Sum_probs=64.0
Q ss_pred cceEEEecCCC--CC---hhchHHHHHHHh-cCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHc----C-CCC
Q 024469 9 EKHFVLVHGVN--HG---AWCWYKLKARLV-AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS----L-PAE 77 (267)
Q Consensus 9 ~~~ivlvHG~~--~~---~~~w~~~~~~L~-~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~----l-~~~ 77 (267)
-|.||+.||.+ .+ +..|..+...++ +.+--|+++|+|=-=+...| ..++|-.+.+.-+.+. . ..-
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P----a~y~D~~~Al~w~~~~~~~~~~~D~ 165 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP----AAYDDGWAALKWVLKNSWLKLGADP 165 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC----ccchHHHHHHHHHHHhHHHHhCCCc
Confidence 47899999875 22 456766777763 34567788998821111111 1334444444444442 1 133
Q ss_pred CcEEEEeeChhhHHHHHHhhhC------CCccceEEEEeccC
Q 024469 78 EKVILVGHSLGGVTLALAADKF------PHKISVAVFVTAFM 113 (267)
Q Consensus 78 ~~vilvGHSmGG~i~~~~a~~~------p~~v~~lvli~~~~ 113 (267)
++|.|+|-|-||.++...|.+. +-+|++.|++-|+.
T Consensus 166 ~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 166 SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 6899999999999888776542 35788999998754
No 138
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.25 E-value=2e-05 Score=67.81 Aligned_cols=111 Identities=15% Similarity=0.209 Sum_probs=71.5
Q ss_pred cCCccceEEEecCCCCChh---chHHHHHHHhcCCCeEEEeCCCC--CCCCCC--------------C-CCcc-------
Q 024469 5 VGMEEKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLAA--SGINMK--------------R-IEDV------- 57 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~~~---~w~~~~~~L~~~g~~via~Dl~G--~G~S~~--------------~-~~~~------- 57 (267)
++...+.||+|||++.++. .-..+...|.+.||.++++.+|. ...+.. . ....
T Consensus 83 ~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 162 (310)
T PF12048_consen 83 SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPAS 162 (310)
T ss_pred CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccc
Confidence 4444579999999997763 34567777888999999998886 111100 0 0000
Q ss_pred ----cChHHhhHHHHHHHHcC------CCCCcEEEEeeChhhHHHHHHhhh-CCCccceEEEEeccCCC
Q 024469 58 ----HTFHAYSEPLMEVLASL------PAEEKVILVGHSLGGVTLALAADK-FPHKISVAVFVTAFMPD 115 (267)
Q Consensus 58 ----~~~~~~~~~l~~~i~~l------~~~~~vilvGHSmGG~i~~~~a~~-~p~~v~~lvli~~~~~~ 115 (267)
.....+...+.+.|+++ .++++++||||+.|+..+..+... .+..+.+||+|++..|.
T Consensus 163 ~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~ 231 (310)
T PF12048_consen 163 AQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQ 231 (310)
T ss_pred ccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCc
Confidence 11233444443333332 144569999999999977777544 45569999999987654
No 139
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.20 E-value=1.6e-05 Score=64.73 Aligned_cols=50 Identities=32% Similarity=0.465 Sum_probs=40.3
Q ss_pred HhhHHHHHHHHcCCCC--CcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 62 AYSEPLMEVLASLPAE--EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 62 ~~~~~l~~~i~~l~~~--~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
+|.+...+++...... +++.|+|.|.||-+++.+|..+| .|+.+|.+++.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps 55 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPS 55 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCc
Confidence 4566677888877432 58999999999999999999999 89999999874
No 140
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.10 E-value=1.9e-05 Score=64.31 Aligned_cols=102 Identities=21% Similarity=0.213 Sum_probs=72.3
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCC-----eEEEeCCCCC----CCCCC----C------CCcccChHHhhHHHHHH
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGH-----RVTAVDLAAS----GINMK----R------IEDVHTFHAYSEPLMEV 70 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~-----~via~Dl~G~----G~S~~----~------~~~~~~~~~~~~~l~~~ 70 (267)
-|.+||||.+.++.+...++.+|...+- =++..|--|. |.=++ | .+...+..+++..+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 3889999999999999999999976531 2344555451 21111 1 11334777888888888
Q ss_pred HHcCC---CCCcEEEEeeChhhHHHHHHhhhCCC-----ccceEEEEec
Q 024469 71 LASLP---AEEKVILVGHSLGGVTLALAADKFPH-----KISVAVFVTA 111 (267)
Q Consensus 71 i~~l~---~~~~vilvGHSmGG~i~~~~a~~~p~-----~v~~lvli~~ 111 (267)
+..|. ...++-+|||||||.....|+..+.+ .+.++|.|++
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~g 174 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAG 174 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecc
Confidence 88773 44689999999999988888877643 3678888775
No 141
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.08 E-value=1.5e-05 Score=67.71 Aligned_cols=99 Identities=18% Similarity=0.249 Sum_probs=61.6
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHH-HHcCC-CCCcEEEEeeC
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEV-LASLP-AEEKVILVGHS 86 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~-i~~l~-~~~~vilvGHS 86 (267)
..-|+|.-|.-. -+.=.-+...+ +.||.|+.+.+|||+.|...+-...+.. .+|.+.++ |..|+ ..+++||.|+|
T Consensus 243 q~LvIC~EGNAG-FYEvG~m~tP~-~lgYsvLGwNhPGFagSTG~P~p~n~~n-A~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 243 QDLVICFEGNAG-FYEVGVMNTPA-QLGYSVLGWNHPGFAGSTGLPYPVNTLN-AADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred ceEEEEecCCcc-ceEeeeecChH-HhCceeeccCCCCccccCCCCCcccchH-HHHHHHHHHHHHcCCCccceEEEEee
Confidence 345666666421 11111122333 4689999999999999875332222322 23333333 33442 33689999999
Q ss_pred hhhHHHHHHhhhCCCccceEEEEec
Q 024469 87 LGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 87 mGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
.||..++.+|.-+|+ |+++||-++
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDAt 343 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDAT 343 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeecc
Confidence 999999999999997 677777554
No 142
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.05 E-value=3.1e-06 Score=70.52 Aligned_cols=53 Identities=17% Similarity=0.293 Sum_probs=42.0
Q ss_pred HHhhHHHHHHHHcCCCC--CcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccC
Q 024469 61 HAYSEPLMEVLASLPAE--EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 61 ~~~~~~l~~~i~~l~~~--~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
+.+.++|...|++.-.. ++..|.||||||..++.++.++|+.+.+++.+++..
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 34556778888755221 127999999999999999999999999999999753
No 143
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.04 E-value=3.7e-05 Score=68.82 Aligned_cols=103 Identities=14% Similarity=0.238 Sum_probs=62.6
Q ss_pred cceEEEecCCCC--ChhchHHHHHHHhcCCC----eEEEeCCCCC-CCCCCCCCcccChHHhhHHHHHHHHcC----CCC
Q 024469 9 EKHFVLVHGVNH--GAWCWYKLKARLVAGGH----RVTAVDLAAS-GINMKRIEDVHTFHAYSEPLMEVLASL----PAE 77 (267)
Q Consensus 9 ~~~ivlvHG~~~--~~~~w~~~~~~L~~~g~----~via~Dl~G~-G~S~~~~~~~~~~~~~~~~l~~~i~~l----~~~ 77 (267)
-|.|+|+||-.- ....+ .++..|.+.|. -++.+|-... .++........-.+.++++|+-.|++. ...
T Consensus 209 ~PvlyllDG~~w~~~~~~~-~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVW-PALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCEEEEEECHHhhhcCCHH-HHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 478899999631 11122 33445544553 3467775321 111100101111233456677777754 122
Q ss_pred CcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 78 ~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
++.+|.|+||||..++.++.++|++|.+++.+++.
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 46899999999999999999999999999998864
No 144
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.03 E-value=3.1e-05 Score=70.40 Aligned_cols=106 Identities=16% Similarity=0.170 Sum_probs=69.2
Q ss_pred ccceEEEecCCCCChhchHHHHH-----------HHhc------CCCeEEEeCCC-CCCCCCCCC-CcccChHHhhHHHH
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKA-----------RLVA------GGHRVTAVDLA-ASGINMKRI-EDVHTFHAYSEPLM 68 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~-----------~L~~------~g~~via~Dl~-G~G~S~~~~-~~~~~~~~~~~~l~ 68 (267)
..|.|+.++|.+..+..+..+.+ .|.. +..+++-+|.| |+|.|-... +...+.++.++|+.
T Consensus 76 ~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~ 155 (462)
T PTZ00472 76 EAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMY 155 (462)
T ss_pred CCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHH
Confidence 45899999999766655533210 1110 12589999987 888875322 12245678888888
Q ss_pred HHHHcC----C--CCCcEEEEeeChhhHHHHHHhhhC---C-------CccceEEEEeccC
Q 024469 69 EVLASL----P--AEEKVILVGHSLGGVTLALAADKF---P-------HKISVAVFVTAFM 113 (267)
Q Consensus 69 ~~i~~l----~--~~~~vilvGHSmGG~i~~~~a~~~---p-------~~v~~lvli~~~~ 113 (267)
++++.. . ...+++|+||||||..+..+|.+. . =.++++++-+++.
T Consensus 156 ~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 156 NFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 888743 1 347999999999999776665432 1 1367888888754
No 145
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.99 E-value=3.1e-05 Score=55.49 Aligned_cols=60 Identities=13% Similarity=0.109 Sum_probs=52.5
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
..|+|+|.++.|+++|.+.++.+++.+++++++++++.||..+...-.-+++++.+|+.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 479999999999999999999999999999999999999999974445667777888753
No 146
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.96 E-value=2.8e-05 Score=61.24 Aligned_cols=96 Identities=18% Similarity=0.199 Sum_probs=66.3
Q ss_pred eEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC---CCCCcEEEEeeCh
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVGHSL 87 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~vilvGHSm 87 (267)
-+||+-|=+.=...=+.+...|+++|+.|+.+|-+-+=++.+ |-++.+.||.++|+.. .+.++++|||.|+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSF 77 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER------TPEQTAADLARIIRHYRARWGRKRVVLIGYSF 77 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC------CHHHHHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 456776654322233468899999999999999764444433 3345566666666544 2557999999999
Q ss_pred hhHHHHHHhhhCC----CccceEEEEecc
Q 024469 88 GGVTLALAADKFP----HKISVAVFVTAF 112 (267)
Q Consensus 88 GG~i~~~~a~~~p----~~v~~lvli~~~ 112 (267)
|+-+.-....+.| ++|..++++++.
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 9987777766666 468888888753
No 147
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.92 E-value=2.4e-05 Score=72.79 Aligned_cols=101 Identities=16% Similarity=0.189 Sum_probs=55.9
Q ss_pred CccceEEEecCCCCChhchHHHHHHHh----------------cCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHH
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKARLV----------------AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEV 70 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~L~----------------~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~ 70 (267)
-+|-||+||.|.-++-..=|.++..-. ...|+-.+.|+-+ +...=+-.++.+.++-+.+.
T Consensus 87 lsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE----e~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 87 LSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE----EFTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc----hhhhhccHhHHHHHHHHHHH
Confidence 357899999997654332222222211 1124556666643 10000123666666666655
Q ss_pred HHcC----CC--C------CcEEEEeeChhhHHHHHHhh---hCCCccceEEEEec
Q 024469 71 LASL----PA--E------EKVILVGHSLGGVTLALAAD---KFPHKISVAVFVTA 111 (267)
Q Consensus 71 i~~l----~~--~------~~vilvGHSmGG~i~~~~a~---~~p~~v~~lvli~~ 111 (267)
|+.. .+ . ..|+||||||||++|...+. .+++.|.-++.+++
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlss 218 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSS 218 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcC
Confidence 5532 11 1 23999999999997665542 23456777777765
No 148
>PLN02606 palmitoyl-protein thioesterase
Probab=97.89 E-value=6.4e-05 Score=63.51 Aligned_cols=98 Identities=18% Similarity=0.138 Sum_probs=64.5
Q ss_pred cceEEEecCCC--CChhchHHHHHHHhc-CCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHH---HcCCCCCcEEE
Q 024469 9 EKHFVLVHGVN--HGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVL---ASLPAEEKVIL 82 (267)
Q Consensus 9 ~~~ivlvHG~~--~~~~~w~~~~~~L~~-~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i---~~l~~~~~vil 82 (267)
..|||+.||.+ +++..+..+.+.+.. .++.+..+- -|-|..+. -...+.+.++.+-+-| +.|. .-+.+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s---~~~~~~~Qv~~vce~l~~~~~L~--~G~na 99 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQDS---LFMPLRQQASIACEKIKQMKELS--EGYNI 99 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcccc---cccCHHHHHHHHHHHHhcchhhc--CceEE
Confidence 46999999998 666688888888852 366555544 23232111 1123344444333333 3332 36999
Q ss_pred EeeChhhHHHHHHhhhCCC--ccceEEEEecc
Q 024469 83 VGHSLGGVTLALAADKFPH--KISVAVFVTAF 112 (267)
Q Consensus 83 vGHSmGG~i~~~~a~~~p~--~v~~lvli~~~ 112 (267)
||+|-||.++=.+++++|+ .|..+|-+++.
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999988788999988 59999999863
No 149
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.84 E-value=0.00052 Score=62.92 Aligned_cols=203 Identities=14% Similarity=0.049 Sum_probs=117.1
Q ss_pred ceEEEecCCCC-----ChhchHH--HHHHHhcCCCeEEEeCCCCCCCCCCC-------CCcccChHHhhHHHHHHHHcCC
Q 024469 10 KHFVLVHGVNH-----GAWCWYK--LKARLVAGGHRVTAVDLAASGINMKR-------IEDVHTFHAYSEPLMEVLASLP 75 (267)
Q Consensus 10 ~~ivlvHG~~~-----~~~~w~~--~~~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~~~~l~~~i~~l~ 75 (267)
|++++|=|.+. +++.|-. -...|++.||-|+.+|-||.-..+.. .-+.-.++|.++-+.-+.+..+
T Consensus 643 ptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~g 722 (867)
T KOG2281|consen 643 PTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTG 722 (867)
T ss_pred ceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcC
Confidence 56666666542 3334422 23457889999999999996543321 0022378899988888887764
Q ss_pred --CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCc
Q 024469 76 --AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSH 153 (267)
Q Consensus 76 --~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
..++|.+-|+|+||..++....++|+-++..|.=+|+..... .++.+.
T Consensus 723 fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~---------------------YDTgYT--------- 772 (867)
T KOG2281|consen 723 FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRL---------------------YDTGYT--------- 772 (867)
T ss_pred cccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeee---------------------ecccch---------
Confidence 236899999999999888888899998876654332211000 011000
Q ss_pred cceeechHHHHHHHhcCCChHHHH-HHHHhcCCCccccccccccccCCccCCCCccEEEEEeCCCccCChHHHHHH----
Q 024469 154 ISMLFGREFLTIKIYQLCPPEDLE-LAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWM---- 228 (267)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP~l~i~g~~D~~~~~~~~~~~---- 228 (267)
+..+..++.+... .+.+.... .+ .+++. .-..++|+|--|.-|.-.....+
T Consensus 773 -----------ERYMg~P~~nE~gY~agSV~~~----Ve------klpde---pnRLlLvHGliDENVHF~Hts~Lvs~l 828 (867)
T KOG2281|consen 773 -----------ERYMGYPDNNEHGYGAGSVAGH----VE------KLPDE---PNRLLLVHGLIDENVHFAHTSRLVSAL 828 (867)
T ss_pred -----------hhhcCCCccchhcccchhHHHH----Hh------hCCCC---CceEEEEecccccchhhhhHHHHHHHH
Confidence 0000000000000 00000000 00 11111 22368899999988766654443
Q ss_pred HHcCCCCeEEEecCCCCCCCC-CCcHHHHHHHHHHHHhh
Q 024469 229 IQNYPVNEVMEIKGGDHMAML-SDPQKLCDCLSQISLKY 266 (267)
Q Consensus 229 ~~~~p~~~~~~i~~~gH~~~~-e~p~~~~~~l~~f~~~~ 266 (267)
.+...--++.+||+-.|++=- |.-.-....|..|++++
T Consensus 829 vkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 829 VKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQEN 867 (867)
T ss_pred HhCCCceEEEEccccccccCCCccchhHHHHHHHHHhhC
Confidence 344444589999999999855 55566777888888763
No 150
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.83 E-value=0.00013 Score=62.71 Aligned_cols=101 Identities=18% Similarity=0.218 Sum_probs=61.6
Q ss_pred ccceEEEecCCCCChh--chHHHHHHHhcCCC--eEEEeCCCCCCC-----CCCCCCcccChHHhhHHHHHHHHcCCCCC
Q 024469 8 EEKHFVLVHGVNHGAW--CWYKLKARLVAGGH--RVTAVDLAASGI-----NMKRIEDVHTFHAYSEPLMEVLASLPAEE 78 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~--~w~~~~~~L~~~g~--~via~Dl~G~G~-----S~~~~~~~~~~~~~~~~l~~~i~~l~~~~ 78 (267)
++..+|||||++.+=. .++. ++-..+.|+ -.+.+.+|.-|. .|+.. ..|+-+++..-|-.+.++. ..+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~-aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS-~~~Sr~aLe~~lr~La~~~-~~~ 191 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRT-AQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRES-TNYSRPALERLLRYLATDK-PVK 191 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHH-HHHHhhcCCCcceEEEEcCCCCeeeecccchhh-hhhhHHHHHHHHHHHHhCC-CCc
Confidence 3568999999975432 3433 333444454 457889997553 12111 2345555555555544444 567
Q ss_pred cEEEEeeChhhHHHHHHhhh--------CCCccceEEEEec
Q 024469 79 KVILVGHSLGGVTLALAADK--------FPHKISVAVFVTA 111 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~~--------~p~~v~~lvli~~ 111 (267)
+++|++||||..++..+.++ .+.+|.-+|+-+|
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaP 232 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAP 232 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCC
Confidence 99999999999977765433 2345667777553
No 151
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.80 E-value=9.9e-05 Score=63.03 Aligned_cols=85 Identities=19% Similarity=0.193 Sum_probs=54.8
Q ss_pred ccceEEEecCCCCChhc----------hHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC---
Q 024469 8 EEKHFVLVHGVNHGAWC----------WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL--- 74 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~----------w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l--- 74 (267)
++.-||+.=|.+..-+. |..++.. .+-+|+.+.+||.|.|..+. +.++++.+-.+.++-|
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~---~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~ 208 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKE---LGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDE 208 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHH---cCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhc
Confidence 45677777776533222 4444444 35689999999999997554 2345554444444333
Q ss_pred CCC---CcEEEEeeChhhHHHHHHhhhC
Q 024469 75 PAE---EKVILVGHSLGGVTLALAADKF 99 (267)
Q Consensus 75 ~~~---~~vilvGHSmGG~i~~~~a~~~ 99 (267)
..+ +++++-|||+||.+++.+..+.
T Consensus 209 ~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 209 EQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ccCCChheEEEeeccccHHHHHHHHHhc
Confidence 122 5799999999999888766543
No 152
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.79 E-value=0.0019 Score=53.50 Aligned_cols=57 Identities=16% Similarity=0.217 Sum_probs=47.6
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcC--C--CCeEEEecCCCCCCCC-CCcHHHHHHHHHH
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNY--P--VNEVMEIKGGDHMAML-SDPQKLCDCLSQI 262 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~--p--~~~~~~i~~~gH~~~~-e~p~~~~~~l~~f 262 (267)
++|.++++++.|.+++++..++.++.. . ..+.+.+++++|..|+ ++|++-.++|.+|
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~f 239 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEF 239 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhh
Confidence 679999999999999999887765432 2 2466788999999999 8899999999887
No 153
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.75 E-value=5.1e-05 Score=63.71 Aligned_cols=38 Identities=21% Similarity=0.241 Sum_probs=34.9
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCC
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS 47 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~ 47 (267)
|.|||-||.+.+...|..+-..|+++||-|.|+.+|-+
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~ 156 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDR 156 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhhCceEEEEeecccC
Confidence 78999999999999999999999999999999998753
No 154
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.74 E-value=0.0014 Score=63.09 Aligned_cols=196 Identities=17% Similarity=0.116 Sum_probs=115.0
Q ss_pred ceEEEecCCCC-----Chh--chHHHHHHHhcCCCeEEEeCCCCCCCCCCC-------CCcccChHHhhHHHHHHHHcCC
Q 024469 10 KHFVLVHGVNH-----GAW--CWYKLKARLVAGGHRVTAVDLAASGINMKR-------IEDVHTFHAYSEPLMEVLASLP 75 (267)
Q Consensus 10 ~~ivlvHG~~~-----~~~--~w~~~~~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~~~~l~~~i~~l~ 75 (267)
|.+|.+||.+. +.+ .|..+ .....|+-|+.+|-||.|..... .-+...+.|....+..+++..-
T Consensus 527 Pllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~ 604 (755)
T KOG2100|consen 527 PLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPF 604 (755)
T ss_pred CEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhccc
Confidence 56788888885 222 46554 34567899999999998764421 1133466677666766666541
Q ss_pred -CCCcEEEEeeChhhHHHHHHhhhCCCcc-ceEEEEeccCCCCCCChhhhHHHHHhhcCCCCcccccccccccCCCCCCc
Q 024469 76 -AEEKVILVGHSLGGVTLALAADKFPHKI-SVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSH 153 (267)
Q Consensus 76 -~~~~vilvGHSmGG~i~~~~a~~~p~~v-~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
..+++.+.|+|+||.+++..+...|+.+ +..|.++|+.... .. +... -++++
T Consensus 605 iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~y-----ds~~------terym-------------- 658 (755)
T KOG2100|consen 605 IDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YY-----DSTY------TERYM-------------- 658 (755)
T ss_pred ccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-ee-----cccc------cHhhc--------------
Confidence 2258999999999999998888888555 4558888753211 00 0000 00000
Q ss_pred cceeechHHHHHHHhcCCChHHHHHHHHhcCCCccccccccccccCCccCCCCcc-EEEEEeCCCccCChHHHHHHHHc-
Q 024469 154 ISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVK-RVYLVCEEDIGLPKQFQHWMIQN- 231 (267)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iP-~l~i~g~~D~~~~~~~~~~~~~~- 231 (267)
................ ......+-| -++++|+.|.-++.+....+.+.
T Consensus 659 ---------------g~p~~~~~~y~e~~~~---------------~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL 708 (755)
T KOG2100|consen 659 ---------------GLPSENDKGYEESSVS---------------SPANNIKTPKLLLIHGTEDDNVHFQQSAILIKAL 708 (755)
T ss_pred ---------------CCCccccchhhhcccc---------------chhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHH
Confidence 0000000000001000 001111233 49999999999988766665532
Q ss_pred ----CCCCeEEEecCCCCCCCCCCc-HHHHHHHHHHHH
Q 024469 232 ----YPVNEVMEIKGGDHMAMLSDP-QKLCDCLSQISL 264 (267)
Q Consensus 232 ----~p~~~~~~i~~~gH~~~~e~p-~~~~~~l~~f~~ 264 (267)
++ .++.++|+..|..-.-.. ..+...+..|+.
T Consensus 709 ~~~gv~-~~~~vypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 709 QNAGVP-FRLLVYPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred HHCCCc-eEEEEeCCCCcccccccchHHHHHHHHHHHH
Confidence 34 788999999999876443 555566666665
No 155
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.72 E-value=0.00091 Score=60.96 Aligned_cols=60 Identities=12% Similarity=0.125 Sum_probs=47.0
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcCC-CCeEEEecCCCCCCCCCC---------cHHHHHHHHHHHHh
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYP-VNEVMEIKGGDHMAMLSD---------PQKLCDCLSQISLK 265 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~gH~~~~e~---------p~~~~~~l~~f~~~ 265 (267)
+.|+|+|.|..|..+++...+.+.++.. ..+++++++++|.+-.-. -.+|...+.+.++.
T Consensus 304 k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~e 373 (784)
T KOG3253|consen 304 KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKE 373 (784)
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHH
Confidence 6799999999999999999998887654 568999999999987654 24555555555544
No 156
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.69 E-value=0.00054 Score=55.38 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=52.9
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeE-EEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRV-TAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~v-ia~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
+.-|||--||+.+...+..+. + ..+|.| +++|.+- . +++. + +...++++||++||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~-~~~~D~l~~yDYr~-------l----~~d~---~-------~~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--L-PENYDVLICYDYRD-------L----DFDF---D-------LSGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--C-CCCccEEEEecCcc-------c----cccc---c-------cccCceEEEEEEeH
Confidence 468999999999888665543 1 234666 4778761 1 1110 1 22557999999999
Q ss_pred hhHHHHHHhhhCCCccceEEEEeccC
Q 024469 88 GGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 88 GG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
|=.+|..+.... .+.+-|.|++..
T Consensus 67 GVw~A~~~l~~~--~~~~aiAINGT~ 90 (213)
T PF04301_consen 67 GVWAANRVLQGI--PFKRAIAINGTP 90 (213)
T ss_pred HHHHHHHHhccC--CcceeEEEECCC
Confidence 999888775544 467778888643
No 157
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.68 E-value=7.5e-05 Score=66.15 Aligned_cols=83 Identities=23% Similarity=0.388 Sum_probs=58.9
Q ss_pred hchHHHHHHHhcCCCe----E--EEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC---CCCCcEEEEeeChhhHHHH
Q 024469 23 WCWYKLKARLVAGGHR----V--TAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVGHSLGGVTLA 93 (267)
Q Consensus 23 ~~w~~~~~~L~~~g~~----v--ia~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~vilvGHSmGG~i~~ 93 (267)
+.|..+++.|..-||. + ..+|+|= |-. .....++|-..++..|+.. .+++||+||+|||||.+..
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~---~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYH---NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccC---ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 4789999999888885 3 4678871 111 1224466677777766644 3458999999999999999
Q ss_pred HHhhhCCCc--------cceEEEEec
Q 024469 94 LAADKFPHK--------ISVAVFVTA 111 (267)
Q Consensus 94 ~~a~~~p~~--------v~~lvli~~ 111 (267)
++...+++. |++.|-+++
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCc
Confidence 998888762 666666664
No 158
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.58 E-value=0.00049 Score=57.59 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=31.9
Q ss_pred CcEEEEeeChhhHHHHHHhhhCCCccceEEEEec
Q 024469 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 78 ~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
.++.++|-|+||.=.+.++.++|+.+.+.++|++
T Consensus 269 sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 269 SRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred ceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 5899999999999889999999999999999985
No 159
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.57 E-value=0.00016 Score=66.24 Aligned_cols=88 Identities=15% Similarity=0.190 Sum_probs=57.1
Q ss_pred hchHHHHHHHhcCCCeEEEeCCCCCCCCCCC-CCcccChHHhhHHHHHHHHcC---CCCCcEEEEeeChhhHHHHHHhhh
Q 024469 23 WCWYKLKARLVAGGHRVTAVDLAASGINMKR-IEDVHTFHAYSEPLMEVLASL---PAEEKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 23 ~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~-~~~~~~~~~~~~~l~~~i~~l---~~~~~vilvGHSmGG~i~~~~a~~ 98 (267)
+.|..+++.|+..||. --||.|..+.=+. .......+.|-..|.+.|+.+ .++++|+||||||||.++..+...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 4689999999999995 3444443321110 001123356666677777744 335799999999999988887543
Q ss_pred CC---------------CccceEEEEecc
Q 024469 99 FP---------------HKISVAVFVTAF 112 (267)
Q Consensus 99 ~p---------------~~v~~lvli~~~ 112 (267)
.. .-|++.|.|++.
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccc
Confidence 21 237888988863
No 160
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.54 E-value=0.00037 Score=55.41 Aligned_cols=102 Identities=14% Similarity=0.270 Sum_probs=68.1
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCC--------CCC---------CCCCCCcccChHHhhHHHHHHHH
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAA--------SGI---------NMKRIEDVHTFHAYSEPLMEVLA 72 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G--------~G~---------S~~~~~~~~~~~~~~~~l~~~i~ 72 (267)
.+||++||.+.++..|..++..|.-..-+-|.|.-|- .+- +..-.++...+..-++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 5899999999999999887777754444445552221 110 11111134577777788888887
Q ss_pred cCC-C---CCcEEEEeeChhhHHHHHHhhhCCCccceEEEEec
Q 024469 73 SLP-A---EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 73 ~l~-~---~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
... . -.++++-|-||||+.+++.+..+|..+.+..-..+
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 651 1 23678889999999999999888776666654443
No 161
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.53 E-value=0.00015 Score=55.79 Aligned_cols=50 Identities=22% Similarity=0.282 Sum_probs=34.2
Q ss_pred hhHHHHHHHHcCC---CCCcEEEEeeChhhHHHHHHhhhCCC----ccceEEEEecc
Q 024469 63 YSEPLMEVLASLP---AEEKVILVGHSLGGVTLALAADKFPH----KISVAVFVTAF 112 (267)
Q Consensus 63 ~~~~l~~~i~~l~---~~~~vilvGHSmGG~i~~~~a~~~p~----~v~~lvli~~~ 112 (267)
....+...++... +..+++++||||||.++..++...+. .+.+++..++.
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 3344444444331 45799999999999999998877654 56677777653
No 162
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.46 E-value=0.0003 Score=64.63 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=60.1
Q ss_pred ccceEEEecCCCC---ChhchHHHHHHHhcC-C-CeEEEeCCC-C---CCCCCCC-CCccc---ChHHhhHHHHHHHHcC
Q 024469 8 EEKHFVLVHGVNH---GAWCWYKLKARLVAG-G-HRVTAVDLA-A---SGINMKR-IEDVH---TFHAYSEPLMEVLASL 74 (267)
Q Consensus 8 ~~~~ivlvHG~~~---~~~~w~~~~~~L~~~-g-~~via~Dl~-G---~G~S~~~-~~~~~---~~~~~~~~l~~~i~~l 74 (267)
..|.||+|||-+. +...+ ....|... + +-|+.++.| | +..+... ..... +.....+.|.+-|+..
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 3488999999531 12222 12233332 3 788899998 4 3322211 11112 3333334455556655
Q ss_pred CC-CCcEEEEeeChhhHHHHHHhhh--CCCccceEEEEeccC
Q 024469 75 PA-EEKVILVGHSLGGVTLALAADK--FPHKISVAVFVTAFM 113 (267)
Q Consensus 75 ~~-~~~vilvGHSmGG~i~~~~a~~--~p~~v~~lvli~~~~ 113 (267)
++ -++|+|.|||-||..+...+.. .+.++.++|++++..
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 32 2489999999999976665543 345789999988643
No 163
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.46 E-value=0.0014 Score=54.99 Aligned_cols=101 Identities=18% Similarity=0.210 Sum_probs=67.0
Q ss_pred cceEEEecCCCCChh------chHHHHHHHhcCCCeEEEeCC-CC------CCCCCCCC---CcccChHHhhHHHHHHHH
Q 024469 9 EKHFVLVHGVNHGAW------CWYKLKARLVAGGHRVTAVDL-AA------SGINMKRI---EDVHTFHAYSEPLMEVLA 72 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~------~w~~~~~~L~~~g~~via~Dl-~G------~G~S~~~~---~~~~~~~~~~~~l~~~i~ 72 (267)
.+.||.+||...++. -|..+++ ..||-|+.||- ++ .|.+..+. .+.-++..+++-+..++.
T Consensus 61 apLvv~LHG~~~sgag~~~~sg~d~lAd---~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~ 137 (312)
T COG3509 61 APLVVVLHGSGGSGAGQLHGTGWDALAD---REGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVN 137 (312)
T ss_pred CCEEEEEecCCCChHHhhcccchhhhhc---ccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHH
Confidence 368899999987664 4666554 35788998842 22 22231111 122234444444444444
Q ss_pred cCCCC--CcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccC
Q 024469 73 SLPAE--EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 73 ~l~~~--~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
+. .. ++|.+.|-|=||..+..++-.+|+.+.++..+++..
T Consensus 138 ~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 138 EY-GIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred hc-CcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 44 23 389999999999989999999999999999999765
No 164
>COG3150 Predicted esterase [General function prediction only]
Probab=97.45 E-value=0.00065 Score=52.11 Aligned_cols=87 Identities=20% Similarity=0.221 Sum_probs=59.0
Q ss_pred EEEecCCCCChhchHHHH--HHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhh
Q 024469 12 FVLVHGVNHGAWCWYKLK--ARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (267)
Q Consensus 12 ivlvHG~~~~~~~w~~~~--~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG 89 (267)
|+.||||.+++.+..++. +.+.. |-|-.+.|.... -.+....++.|..+|..+ ..+.+.|||-|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~--------~~~~i~y~~p~l--~h~p~~a~~ele~~i~~~-~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE--------DVRDIEYSTPHL--PHDPQQALKELEKAVQEL-GDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc--------cccceeeecCCC--CCCHHHHHHHHHHHHHHc-CCCCceEEeecchH
Confidence 899999999998887744 22322 223333332211 136678889999999988 44569999999999
Q ss_pred HHHHHHhhhCCCccceEEEEecc
Q 024469 90 VTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 90 ~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
..+...+.++. |+ -|+++|.
T Consensus 71 Y~At~l~~~~G--ir-av~~NPa 90 (191)
T COG3150 71 YYATWLGFLCG--IR-AVVFNPA 90 (191)
T ss_pred HHHHHHHHHhC--Ch-hhhcCCC
Confidence 99998887753 33 3444544
No 165
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.43 E-value=0.00036 Score=56.00 Aligned_cols=99 Identities=19% Similarity=0.220 Sum_probs=70.9
Q ss_pred ceEEEecCCCCChhc--h-HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCC---CcEEEE
Q 024469 10 KHFVLVHGVNHGAWC--W-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE---EKVILV 83 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~--w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~---~~vilv 83 (267)
.-||||-|.+.+--. | ..+...|.+.+|..+-+-++. ....-++.++.+.++||..+++++.+- ++|+|+
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~S----sy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~ 112 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRS----SYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLV 112 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccc----cccccccccccccHHHHHHHHHHhhccCcccceEEE
Confidence 568999999876532 2 446666777889999998873 221113457888889999999977322 389999
Q ss_pred eeChhhHHHHHHh--hhCCCccceEEEEecc
Q 024469 84 GHSLGGVTLALAA--DKFPHKISVAVFVTAF 112 (267)
Q Consensus 84 GHSmGG~i~~~~a--~~~p~~v~~lvli~~~ 112 (267)
|||-|.-=+.+|. ...|..|...|+.+|+
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 9999998555554 3456778888888865
No 166
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.42 E-value=0.00018 Score=60.31 Aligned_cols=102 Identities=16% Similarity=0.157 Sum_probs=55.4
Q ss_pred ceEEEecCCCCC---hhchHHHHHHHhcC--CCeEEEeCCCCCCCC-CCCCCcccChHHhhHHHHHHHHcCCCC-CcEEE
Q 024469 10 KHFVLVHGVNHG---AWCWYKLKARLVAG--GHRVTAVDLAASGIN-MKRIEDVHTFHAYSEPLMEVLASLPAE-EKVIL 82 (267)
Q Consensus 10 ~~ivlvHG~~~~---~~~w~~~~~~L~~~--g~~via~Dl~G~G~S-~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~vil 82 (267)
.|||+.||.+.+ +..+..+...+++. |--|+.+++ |-|.+ +....-.-.+.+.++.+-+.++.-... .-+++
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~~ 84 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFNA 84 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EEE
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcceee
Confidence 699999999864 34676666655432 446777776 32221 111101124566666666655543211 47999
Q ss_pred EeeChhhHHHHHHhhhCCC-ccceEEEEecc
Q 024469 83 VGHSLGGVTLALAADKFPH-KISVAVFVTAF 112 (267)
Q Consensus 83 vGHSmGG~i~~~~a~~~p~-~v~~lvli~~~ 112 (267)
||+|-||.+.=.+++++|+ .|..+|.+++.
T Consensus 85 IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 85 IGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 9999999987778999876 69999999863
No 167
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.39 E-value=0.0022 Score=51.26 Aligned_cols=103 Identities=20% Similarity=0.262 Sum_probs=61.0
Q ss_pred cceEEEecCCCC-ChhchHH------------HHH---HHhcCCCeEEEeCCC---CCCCCCC-CCCccc-ChHHhhHHH
Q 024469 9 EKHFVLVHGVNH-GAWCWYK------------LKA---RLVAGGHRVTAVDLA---ASGINMK-RIEDVH-TFHAYSEPL 67 (267)
Q Consensus 9 ~~~ivlvHG~~~-~~~~w~~------------~~~---~L~~~g~~via~Dl~---G~G~S~~-~~~~~~-~~~~~~~~l 67 (267)
.+-+|||||.+- .+..|.. ++| +-.+.||.|+...-- -+-.+-+ +..... .++..--.-
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 468999999983 3344522 112 122468999988632 1222211 111111 222222223
Q ss_pred HHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCC--ccceEEEEecc
Q 024469 68 MEVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISVAVFVTAF 112 (267)
Q Consensus 68 ~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~--~v~~lvli~~~ 112 (267)
..+|.-. .-+.+.+|.||+||.....+..++|+ +|.++.+-++.
T Consensus 181 ~~~v~pa-~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPA-KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhccc-CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 3444444 44789999999999988888889884 67788887764
No 168
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.29 E-value=0.0005 Score=51.80 Aligned_cols=36 Identities=31% Similarity=0.547 Sum_probs=26.7
Q ss_pred HhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhh
Q 024469 62 AYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 62 ~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~ 98 (267)
...+.|.++++.- ...++++.||||||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~-~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKY-PDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-cCccchhhccchHHHHHHHHHHh
Confidence 4445666666655 34689999999999988887654
No 169
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.29 E-value=0.0016 Score=55.30 Aligned_cols=100 Identities=12% Similarity=0.122 Sum_probs=61.7
Q ss_pred cceEEEecCCCCChh--chHHHHHHHhc-CCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCC-CCcEEEEe
Q 024469 9 EKHFVLVHGVNHGAW--CWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA-EEKVILVG 84 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~--~w~~~~~~L~~-~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~-~~~vilvG 84 (267)
..|+|+-||.+.+-. ....+.+.+.. .|..|+.+-+ |.+. ...-...+.+.++.+-+-|..... ..-+.+||
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~-~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIG 100 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV-GDSWLMPLTQQAEIACEKVKQMKELSQGYNIVG 100 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc-cccceeCHHHHHHHHHHHHhhchhhhCcEEEEE
Confidence 469999999985433 45555555533 2556666544 2221 111112444444443333332211 13699999
Q ss_pred eChhhHHHHHHhhhCCC--ccceEEEEecc
Q 024469 85 HSLGGVTLALAADKFPH--KISVAVFVTAF 112 (267)
Q Consensus 85 HSmGG~i~~~~a~~~p~--~v~~lvli~~~ 112 (267)
||-||.++=.+++++|+ .|..+|-+++.
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 99999988888999997 59999999863
No 170
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.29 E-value=0.0014 Score=59.31 Aligned_cols=77 Identities=21% Similarity=0.117 Sum_probs=52.1
Q ss_pred CeEEEeCCCCCCCCCCCCC------cccChHHhhHHHHHHHHcCC------CCCcEEEEeeChhhHHHHHHhhhCCCccc
Q 024469 37 HRVTAVDLAASGINMKRIE------DVHTFHAYSEPLMEVLASLP------AEEKVILVGHSLGGVTLALAADKFPHKIS 104 (267)
Q Consensus 37 ~~via~Dl~G~G~S~~~~~------~~~~~~~~~~~l~~~i~~l~------~~~~vilvGHSmGG~i~~~~a~~~p~~v~ 104 (267)
--|+++.+|-+|.|-...+ .--|.++..+|+..|++.+. ...|+|++|=|+||++++-+-.++|+.|.
T Consensus 60 a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ 139 (434)
T PF05577_consen 60 ALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFD 139 (434)
T ss_dssp EEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-S
T ss_pred CcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeE
Confidence 3689999999999964321 11267777777777776552 22489999999999999999999999999
Q ss_pred eEEEEeccC
Q 024469 105 VAVFVTAFM 113 (267)
Q Consensus 105 ~lvli~~~~ 113 (267)
+.+.-++.+
T Consensus 140 ga~ASSapv 148 (434)
T PF05577_consen 140 GAWASSAPV 148 (434)
T ss_dssp EEEEET--C
T ss_pred EEEecccee
Confidence 988877543
No 171
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.28 E-value=0.011 Score=53.46 Aligned_cols=79 Identities=20% Similarity=0.226 Sum_probs=57.3
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC----CCCCcEEEEeeChhhHHHHHHhhhCCC
Q 024469 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----PAEEKVILVGHSLGGVTLALAADKFPH 101 (267)
Q Consensus 26 ~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l----~~~~~vilvGHSmGG~i~~~~a~~~p~ 101 (267)
+.+--.|. .||.|+.+.+. ++.. ...|+++.+....++++.. ....+++|||..-||+.++.+|..+|+
T Consensus 91 SevG~AL~-~GHPvYFV~F~----p~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 91 SEVGVALR-AGHPVYFVGFF----PEPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred cHHHHHHH-cCCCeEEEEec----CCCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcC
Confidence 34666775 48999876554 2222 2348888777666666654 222389999999999999999999999
Q ss_pred ccceEEEEec
Q 024469 102 KISVAVFVTA 111 (267)
Q Consensus 102 ~v~~lvli~~ 111 (267)
++.-+|+-.+
T Consensus 164 ~~gplvlaGa 173 (581)
T PF11339_consen 164 LVGPLVLAGA 173 (581)
T ss_pred ccCceeecCC
Confidence 9988888664
No 172
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=97.21 E-value=0.0097 Score=48.04 Aligned_cols=43 Identities=19% Similarity=0.267 Sum_probs=34.4
Q ss_pred CccEEEEEeCCCccCChHHHHHH---HHcCCC--CeEEEecCCCCCCC
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWM---IQNYPV--NEVMEIKGGDHMAM 248 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~---~~~~p~--~~~~~i~~~gH~~~ 248 (267)
++|++++.++.|.++|++...+. .+..|. .+++++++.+|--+
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 68999999999999999866544 334453 46899999999876
No 173
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.14 E-value=0.00081 Score=52.86 Aligned_cols=50 Identities=28% Similarity=0.388 Sum_probs=38.4
Q ss_pred HhhHHHHHHHHcCC----CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEec
Q 024469 62 AYSEPLMEVLASLP----AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 62 ~~~~~l~~~i~~l~----~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
+-+..|.+|++.|. ...+++++|||||+.++..++.+.+..+..+|++.+
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GS 142 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGS 142 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECC
Confidence 34455666666552 234799999999999988888777888999999885
No 174
>COG0627 Predicted esterase [General function prediction only]
Probab=97.04 E-value=0.0022 Score=55.23 Aligned_cols=105 Identities=16% Similarity=0.199 Sum_probs=65.0
Q ss_pred ceEEEecCCCCChhch---HHHHHHHhcCCCeEEEeCCC--------------CCCC---CCCC---CC-cccChHHhh-
Q 024469 10 KHFVLVHGVNHGAWCW---YKLKARLVAGGHRVTAVDLA--------------ASGI---NMKR---IE-DVHTFHAYS- 64 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w---~~~~~~L~~~g~~via~Dl~--------------G~G~---S~~~---~~-~~~~~~~~~- 64 (267)
|.+.++||..++...| ..+-......|.-++++|-. |-+. ++.. .. ..|.+++|.
T Consensus 55 pV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl~ 134 (316)
T COG0627 55 PVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFLT 134 (316)
T ss_pred CEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHHH
Confidence 6788999998775433 22333334456666666322 2221 1211 00 125666665
Q ss_pred HHHHHHHHcCCC-C---CcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccCC
Q 024469 65 EPLMEVLASLPA-E---EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (267)
Q Consensus 65 ~~l~~~i~~l~~-~---~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~~ 114 (267)
.+|-+.+++... . .+.-++||||||.-+...|.++|+++..+.-.++.+.
T Consensus 135 ~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~ 188 (316)
T COG0627 135 QELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILS 188 (316)
T ss_pred hhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccc
Confidence 455545553312 1 2678999999999999999999999999988887654
No 175
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.93 E-value=0.0023 Score=52.55 Aligned_cols=97 Identities=21% Similarity=0.182 Sum_probs=55.2
Q ss_pred eEEEecCCCCCh---hchHHHHHHHhcCCCeEEEeCCC-CCCCCCCCCCcccChHHhhHHHHHHHHcCC--C-CCcEEEE
Q 024469 11 HFVLVHGVNHGA---WCWYKLKARLVAGGHRVTAVDLA-ASGINMKRIEDVHTFHAYSEPLMEVLASLP--A-EEKVILV 83 (267)
Q Consensus 11 ~ivlvHG~~~~~---~~w~~~~~~L~~~g~~via~Dl~-G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~-~~~vilv 83 (267)
.|-||=|.+-++ -+|+.+.+.|+++||.|||.-.. |+..-. . ...-+..+-..+..+.+.-+ . .-++.=|
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~--~-A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~v 95 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQA--I-AREVWERFERCLRALQKRGGLDPAYLPVYGV 95 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHH--H-HHHHHHHHHHHHHHHHHhcCCCcccCCeeee
Confidence 444555665443 37999999999999999987653 211100 0 00011222222222222111 1 1267789
Q ss_pred eeChhhHHHHHHhhhCCCccceEEEEe
Q 024469 84 GHSLGGVTLALAADKFPHKISVAVFVT 110 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~p~~v~~lvli~ 110 (267)
|||||+..-+.+...++..-++.|+++
T Consensus 96 GHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 96 GHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred ecccchHHHHHHhhhccCcccceEEEe
Confidence 999999876666655554447778877
No 176
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.89 E-value=0.0063 Score=52.00 Aligned_cols=44 Identities=16% Similarity=0.219 Sum_probs=34.3
Q ss_pred CCccEEEEEeCCCccCChHHHHHHHHcC--C---CCeEEEecCCCCCCC
Q 024469 205 GSVKRVYLVCEEDIGLPKQFQHWMIQNY--P---VNEVMEIKGGDHMAM 248 (267)
Q Consensus 205 ~~iP~l~i~g~~D~~~~~~~~~~~~~~~--p---~~~~~~i~~~gH~~~ 248 (267)
.++|+++.+|..|.++|...++.+.+.. . ..+++.++..+|..-
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 3689999999999999999888765532 2 345677788999864
No 177
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.76 E-value=0.0027 Score=52.73 Aligned_cols=48 Identities=23% Similarity=0.400 Sum_probs=37.9
Q ss_pred HHHHHHHHcC-C-CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 65 EPLMEVLASL-P-AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 65 ~~l~~~i~~l-~-~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
++|+-+|++- . ..++-.++||||||++++.+-..+|+.+.+..+++|+
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 4455556652 1 2246899999999999999999999999999999875
No 178
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.76 E-value=0.0035 Score=51.38 Aligned_cols=45 Identities=24% Similarity=0.286 Sum_probs=33.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCC----CccceEEEEec
Q 024469 65 EPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP----HKISVAVFVTA 111 (267)
Q Consensus 65 ~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p----~~v~~lvli~~ 111 (267)
+.+..+++.. . +++++.|||+||..|+++|...+ ++|.++...++
T Consensus 73 ~yl~~~~~~~-~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 73 AYLKKIAKKY-P-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHhC-C-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 3444555544 3 46999999999999999877643 57888887775
No 179
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.75 E-value=0.011 Score=48.96 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=64.1
Q ss_pred ceEEEecCCCCChhc--hHHHHHHHhcC-CCeEEEeCCCCCC--CCCCCCCcccChHHhhHHHHHHHHcCCCC-CcEEEE
Q 024469 10 KHFVLVHGVNHGAWC--WYKLKARLVAG-GHRVTAVDLAASG--INMKRIEDVHTFHAYSEPLMEVLASLPAE-EKVILV 83 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~--w~~~~~~L~~~-g~~via~Dl~G~G--~S~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~vilv 83 (267)
.|+|+.||.+.+... ...+.+.+.+. |..|+++|+ |-| .|- ...+.+.++.+-+.++..... .-..+|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~-----l~pl~~Qv~~~ce~v~~m~~lsqGyniv 97 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS-----LMPLWEQVDVACEKVKQMPELSQGYNIV 97 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh-----hccHHHHHHHHHHHHhcchhccCceEEE
Confidence 799999999876665 77777777543 678889986 444 221 113344444333333322111 469999
Q ss_pred eeChhhHHHHHHhhhCCC-ccceEEEEec
Q 024469 84 GHSLGGVTLALAADKFPH-KISVAVFVTA 111 (267)
Q Consensus 84 GHSmGG~i~~~~a~~~p~-~v~~lvli~~ 111 (267)
|.|-||+++=.+++..++ .|..+|-+++
T Consensus 98 g~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 98 GYSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred EEccccHHHHHHHHhCCCCCcceeEeccC
Confidence 999999987777888776 5888888875
No 180
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.71 E-value=0.0032 Score=57.75 Aligned_cols=81 Identities=21% Similarity=0.150 Sum_probs=58.6
Q ss_pred HHhcCCCeEEEeCCCCCCCCCCCCCcccC-hHHhhHHHHHHHHcCC-CCCcEEEEeeChhhHHHHHHhhhCCCccceEEE
Q 024469 31 RLVAGGHRVTAVDLAASGINMKRIEDVHT-FHAYSEPLMEVLASLP-AEEKVILVGHSLGGVTLALAADKFPHKISVAVF 108 (267)
Q Consensus 31 ~L~~~g~~via~Dl~G~G~S~~~~~~~~~-~~~~~~~l~~~i~~l~-~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvl 108 (267)
.++++||-|+-.|.||.|.|+...+..++ =.+.+.|+++.|.+.. -+.+|-.+|-|++|.....+|...|--++.++-
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p 154 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAP 154 (563)
T ss_pred eeecCceEEEEecccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecc
Confidence 46788999999999999999865433333 2344456778887762 246999999999999877776666655566655
Q ss_pred Eec
Q 024469 109 VTA 111 (267)
Q Consensus 109 i~~ 111 (267)
.++
T Consensus 155 ~~~ 157 (563)
T COG2936 155 TEG 157 (563)
T ss_pred ccc
Confidence 554
No 181
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.66 E-value=0.0051 Score=53.92 Aligned_cols=99 Identities=20% Similarity=0.214 Sum_probs=64.4
Q ss_pred cceEEEecCCCC-------ChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCc-------------ccChHHhhHHHH
Q 024469 9 EKHFVLVHGVNH-------GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIED-------------VHTFHAYSEPLM 68 (267)
Q Consensus 9 ~~~ivlvHG~~~-------~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~-------------~~~~~~~~~~l~ 68 (267)
+.||+|--|-=. +..+...++|.|.+ -+|-..+|-+|+|-..... ...++|||.-|.
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~A---llVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPELKA---LLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHhhCc---eEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 478888888633 22233467887754 4788899999988542211 113444444443
Q ss_pred HHHHcCC-CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEe
Q 024469 69 EVLASLP-AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVT 110 (267)
Q Consensus 69 ~~i~~l~-~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~ 110 (267)
.+=+.++ ...+||.+|-|+|||.++-+=.+||+.|.+.+.-+
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaS 199 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAAS 199 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhcc
Confidence 3333332 23589999999999998888889999987755433
No 182
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.65 E-value=0.0042 Score=51.04 Aligned_cols=23 Identities=43% Similarity=0.650 Sum_probs=19.1
Q ss_pred CCCcEEEEeeChhhHHHHHHhhh
Q 024469 76 AEEKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 76 ~~~~vilvGHSmGG~i~~~~a~~ 98 (267)
...++++.||||||.+|+.+|..
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHH
Confidence 34689999999999998887654
No 183
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.54 E-value=0.083 Score=46.47 Aligned_cols=57 Identities=7% Similarity=0.111 Sum_probs=48.3
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcCCCCe-EEEecCCCCCCCCCCcHHHHHHHHHHHHh
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNE-VMEIKGGDHMAMLSDPQKLCDCLSQISLK 265 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~-~~~i~~~gH~~~~e~p~~~~~~l~~f~~~ 265 (267)
.+|+++|.|..|....|+.....-+.+|+.+ +..+||++|..-. ..+.+.|..|...
T Consensus 262 ~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 262 TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred CccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 8999999999999999999998888888664 6889999999877 5666777777754
No 184
>PLN02162 triacylglycerol lipase
Probab=96.54 E-value=0.0067 Score=54.33 Aligned_cols=35 Identities=40% Similarity=0.449 Sum_probs=25.5
Q ss_pred HhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhh
Q 024469 62 AYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 62 ~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~ 97 (267)
+..+.|.++++.- ...++++.||||||++|+.+|.
T Consensus 263 ~I~~~L~~lL~k~-p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARN-KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhC-CCceEEEEecChHHHHHHHHHH
Confidence 3445566666655 4468999999999999888753
No 185
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.45 E-value=0.012 Score=47.42 Aligned_cols=59 Identities=17% Similarity=0.233 Sum_probs=46.9
Q ss_pred CCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCCCCCCCc--HHHHHHHHHHHH
Q 024469 205 GSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDP--QKLCDCLSQISL 264 (267)
Q Consensus 205 ~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p--~~~~~~l~~f~~ 264 (267)
.++|+|.|.|+.|.++|......+++..+++.++.=+ .||.++-.++ +.+++.|..|.+
T Consensus 162 i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 162 LSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred CCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHHH
Confidence 3889999999999999999999999999988665556 8999998875 444444444443
No 186
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.42 E-value=0.0048 Score=49.34 Aligned_cols=108 Identities=19% Similarity=0.176 Sum_probs=64.6
Q ss_pred cCCccceEEEecCCCCChhchHH---HHHHHhcCCCeEEEeCCC--CC---CCCCC----------------CCCcccCh
Q 024469 5 VGMEEKHFVLVHGVNHGAWCWYK---LKARLVAGGHRVTAVDLA--AS---GINMK----------------RIEDVHTF 60 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~~~~w~~---~~~~L~~~g~~via~Dl~--G~---G~S~~----------------~~~~~~~~ 60 (267)
.|..-|.+..+-|..+....+-. ..+.-..+|.-|++||-- |. |.++. ++...|.+
T Consensus 40 ~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrM 119 (283)
T KOG3101|consen 40 RGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRM 119 (283)
T ss_pred cCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhH
Confidence 34445788999999877654411 112223567888999853 31 22221 11133566
Q ss_pred HHhh-HHHHHHHHcC-CC--CCcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 61 HAYS-EPLMEVLASL-PA--EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 61 ~~~~-~~l~~~i~~l-~~--~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
.+|+ .+|.+++... -+ ..++-+.||||||.=++.-+.+.|.+..++-..+|.
T Consensus 120 YdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 120 YDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 6665 4566666521 11 136889999999986666677888877776555543
No 187
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.41 E-value=0.043 Score=48.21 Aligned_cols=103 Identities=15% Similarity=0.147 Sum_probs=61.5
Q ss_pred ccceEEEecCCCCChhchHH-------HHHHHhcCCCeEEEeCCCCCC--CCCCCCCcccChHHhhHHHHHHHHcCCCCC
Q 024469 8 EEKHFVLVHGVNHGAWCWYK-------LKARLVAGGHRVTAVDLAASG--INMKRIEDVHTFHAYSEPLMEVLASLPAEE 78 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~-------~~~~L~~~g~~via~Dl~G~G--~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~ 78 (267)
+.|.|+.+||.+---..... +...|. .-.++++|..--. .-+.. --+.+.+.++-...+++.. +.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~--yPtQL~qlv~~Y~~Lv~~~-G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHK--YPTQLRQLVATYDYLVESE-GNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCc--CchHHHHHHHHHHHHHhcc-CCC
Confidence 36899999998744333222 333332 2366777765321 00111 1125566666666777656 458
Q ss_pred cEEEEeeChhhHHHHHHhh--hCCCc---cceEEEEeccCCC
Q 024469 79 KVILVGHSLGGVTLALAAD--KFPHK---ISVAVFVTAFMPD 115 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~--~~p~~---v~~lvli~~~~~~ 115 (267)
+++|+|-|-||..++.+.+ +.+++ =+++|+|+|++..
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 9999999999986665432 22222 2589999998753
No 188
>PLN02571 triacylglycerol lipase
Probab=96.29 E-value=0.0054 Score=54.39 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=26.9
Q ss_pred HHhhHHHHHHHHcCCCC-CcEEEEeeChhhHHHHHHhhh
Q 024469 61 HAYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 61 ~~~~~~l~~~i~~l~~~-~~vilvGHSmGG~i~~~~a~~ 98 (267)
+++.++|.++++..... .++++.||||||++|+.+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44556666666655221 268999999999999887754
No 189
>PLN02454 triacylglycerol lipase
Probab=96.27 E-value=0.0063 Score=53.94 Aligned_cols=20 Identities=45% Similarity=0.635 Sum_probs=17.3
Q ss_pred cEEEEeeChhhHHHHHHhhh
Q 024469 79 KVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~~ 98 (267)
++++.||||||++|+.+|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 39999999999999988743
No 190
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.25 E-value=0.0066 Score=54.54 Aligned_cols=105 Identities=17% Similarity=0.170 Sum_probs=63.0
Q ss_pred CccceEEEecCCC----CChhchHHHHHHHhcCC-CeEEEeCCC-C-CCCC--------CCCCCcccChHHh---hHHHH
Q 024469 7 MEEKHFVLVHGVN----HGAWCWYKLKARLVAGG-HRVTAVDLA-A-SGIN--------MKRIEDVHTFHAY---SEPLM 68 (267)
Q Consensus 7 ~~~~~ivlvHG~~----~~~~~w~~~~~~L~~~g-~~via~Dl~-G-~G~S--------~~~~~~~~~~~~~---~~~l~ 68 (267)
.+-|.+|.|||-+ +++.-|+. -..|+++| .=|+++++| | +|.= +...+. ..+.|. .+.|.
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~yd-gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n-~Gl~DqilALkWV~ 169 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYD-GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN-LGLLDQILALKWVR 169 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccC-hHHHHhcCCEEEEEeCcccccceeeehhhcccccccccc-ccHHHHHHHHHHHH
Confidence 3348999999874 34444444 34577776 555666665 3 2321 111111 233333 35677
Q ss_pred HHHHcCCCC-CcEEEEeeChhhHHHHHH-hh-hCCCccceEEEEeccC
Q 024469 69 EVLASLPAE-EKVILVGHSLGGVTLALA-AD-KFPHKISVAVFVTAFM 113 (267)
Q Consensus 69 ~~i~~l~~~-~~vilvGHSmGG~i~~~~-a~-~~p~~v~~lvli~~~~ 113 (267)
+-|++.++. ++|+|.|+|-||+.++.. |. .....+.++|+.++..
T Consensus 170 ~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 170 DNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 778888433 479999999999954443 32 2234688988888654
No 191
>PLN00413 triacylglycerol lipase
Probab=96.22 E-value=0.0068 Score=54.44 Aligned_cols=35 Identities=34% Similarity=0.447 Sum_probs=27.6
Q ss_pred HhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhh
Q 024469 62 AYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 62 ~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~ 97 (267)
+..+.|.++++.. ...++++.||||||++|+.+|.
T Consensus 269 ~i~~~Lk~ll~~~-p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN-PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC-CCCeEEEEecCHHHHHHHHHHH
Confidence 4556777777766 4568999999999999888763
No 192
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.97 E-value=0.012 Score=49.77 Aligned_cols=101 Identities=19% Similarity=0.207 Sum_probs=60.5
Q ss_pred cceEEEecCC--CCChhchHHHHHHHhcCCC---eEEEeCCCCCCCCCCCCCccc----ChHHhhHHHHHHHHcCC----
Q 024469 9 EKHFVLVHGV--NHGAWCWYKLKARLVAGGH---RVTAVDLAASGINMKRIEDVH----TFHAYSEPLMEVLASLP---- 75 (267)
Q Consensus 9 ~~~ivlvHG~--~~~~~~w~~~~~~L~~~g~---~via~Dl~G~G~S~~~~~~~~----~~~~~~~~l~~~i~~l~---- 75 (267)
-|.+++.||- +.+...|+.+-..+++..- -+|.+|- .....+....+ .+...+++|.=.|++.-
T Consensus 98 ~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~---~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~ 174 (299)
T COG2382 98 YPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDY---IDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSA 174 (299)
T ss_pred ccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCC---CCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccc
Confidence 3688999986 3455566665555543211 2223332 11111111112 33444455555555431
Q ss_pred CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 76 ~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
....-+|.|-||||.+++.++.++|++|..++.-++.
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 2246799999999999999999999999999887764
No 193
>PLN02408 phospholipase A1
Probab=95.91 E-value=0.011 Score=51.66 Aligned_cols=35 Identities=31% Similarity=0.430 Sum_probs=24.3
Q ss_pred hHHHHHHHHcCCCC-CcEEEEeeChhhHHHHHHhhh
Q 024469 64 SEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 64 ~~~l~~~i~~l~~~-~~vilvGHSmGG~i~~~~a~~ 98 (267)
.++|.++++.-... .++++.||||||++|+.+|..
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 34556666654221 258999999999998887754
No 194
>PLN02310 triacylglycerol lipase
Probab=95.85 E-value=0.011 Score=52.24 Aligned_cols=36 Identities=25% Similarity=0.342 Sum_probs=24.6
Q ss_pred hhHHHHHHHHcCC---CCCcEEEEeeChhhHHHHHHhhh
Q 024469 63 YSEPLMEVLASLP---AEEKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 63 ~~~~l~~~i~~l~---~~~~vilvGHSmGG~i~~~~a~~ 98 (267)
..+.|.++++... ...++++.||||||++|+.+|..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3445556555431 22379999999999998888743
No 195
>PLN02934 triacylglycerol lipase
Probab=95.79 E-value=0.013 Score=53.14 Aligned_cols=34 Identities=32% Similarity=0.459 Sum_probs=26.5
Q ss_pred HhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHh
Q 024469 62 AYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAA 96 (267)
Q Consensus 62 ~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a 96 (267)
+..+.|.+++++- ...++++.||||||++|+.+|
T Consensus 306 ~v~~~lk~ll~~~-p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 306 AVRSKLKSLLKEH-KNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred HHHHHHHHHHHHC-CCCeEEEeccccHHHHHHHHH
Confidence 4556667777665 456899999999999888876
No 196
>PLN02324 triacylglycerol lipase
Probab=95.67 E-value=0.015 Score=51.48 Aligned_cols=34 Identities=32% Similarity=0.433 Sum_probs=24.0
Q ss_pred hHHHHHHHHcCCC-CCcEEEEeeChhhHHHHHHhh
Q 024469 64 SEPLMEVLASLPA-EEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 64 ~~~l~~~i~~l~~-~~~vilvGHSmGG~i~~~~a~ 97 (267)
.+.|.++++.... ..++++.||||||++|+.+|.
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3456666665422 126999999999999888874
No 197
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=95.67 E-value=0.034 Score=51.42 Aligned_cols=105 Identities=14% Similarity=0.117 Sum_probs=56.3
Q ss_pred cceEEEecCCC--CChh--chHHHHHHHhcCCCeEEEeCCC-C-CC--CCCCC-CC-cccChHHhh---HHHHHHHHcCC
Q 024469 9 EKHFVLVHGVN--HGAW--CWYKLKARLVAGGHRVTAVDLA-A-SG--INMKR-IE-DVHTFHAYS---EPLMEVLASLP 75 (267)
Q Consensus 9 ~~~ivlvHG~~--~~~~--~w~~~~~~L~~~g~~via~Dl~-G-~G--~S~~~-~~-~~~~~~~~~---~~l~~~i~~l~ 75 (267)
-|.+|+|||-+ .++. ....-...+..++.=||++..| | +| .++.. .. ..+.+.|.. +.|.+=|.+.+
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 38899999864 2222 2222233445556777788877 2 22 22111 11 223344433 45666677774
Q ss_pred CC-CcEEEEeeChhhHHHHHH--hhhCCCccceEEEEeccC
Q 024469 76 AE-EKVILVGHSLGGVTLALA--ADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 76 ~~-~~vilvGHSmGG~i~~~~--a~~~p~~v~~lvli~~~~ 113 (267)
+. ++|+|.|||-||..+... +..-..++.++|+.++..
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred cCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 32 479999999999855443 333356899999999743
No 198
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.51 E-value=0.028 Score=45.26 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=30.5
Q ss_pred hHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhC
Q 024469 60 FHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (267)
Q Consensus 60 ~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~ 99 (267)
..|..+.....|++..+++++||+|||-|+..+..+...+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3455555666777776778999999999999888876553
No 199
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=95.43 E-value=0.032 Score=50.90 Aligned_cols=59 Identities=8% Similarity=0.016 Sum_probs=46.5
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcC------------------------------C-----CCeEEEecCCCCCCCCC
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNY------------------------------P-----VNEVMEIKGGDHMAMLS 250 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~------------------------------p-----~~~~~~i~~~gH~~~~e 250 (267)
.+++++..|..|.+++....++.++.+ . +.+++.|.+|||+++.+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 578999999999999887665543211 1 23456778999999999
Q ss_pred CcHHHHHHHHHHHH
Q 024469 251 DPQKLCDCLSQISL 264 (267)
Q Consensus 251 ~p~~~~~~l~~f~~ 264 (267)
+|++..+.|.+|+.
T Consensus 444 ~P~~~~~~i~~fl~ 457 (462)
T PTZ00472 444 QPAVALTMINRFLR 457 (462)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999984
No 200
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.37 E-value=0.021 Score=51.84 Aligned_cols=35 Identities=29% Similarity=0.390 Sum_probs=24.7
Q ss_pred hhHHHHHHHHcCC---CCCcEEEEeeChhhHHHHHHhh
Q 024469 63 YSEPLMEVLASLP---AEEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 63 ~~~~l~~~i~~l~---~~~~vilvGHSmGG~i~~~~a~ 97 (267)
..++|.++++... ...++++.||||||++|+.+|.
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 3456666665442 2236999999999998888774
No 201
>PLN02802 triacylglycerol lipase
Probab=95.32 E-value=0.024 Score=51.37 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=24.3
Q ss_pred hhHHHHHHHHcCCC-CCcEEEEeeChhhHHHHHHhhh
Q 024469 63 YSEPLMEVLASLPA-EEKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 63 ~~~~l~~~i~~l~~-~~~vilvGHSmGG~i~~~~a~~ 98 (267)
..++|.++++.... ..++++.||||||++++.+|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 33455556654422 1268999999999998887654
No 202
>PLN02753 triacylglycerol lipase
Probab=95.14 E-value=0.028 Score=51.13 Aligned_cols=34 Identities=24% Similarity=0.353 Sum_probs=23.5
Q ss_pred hHHHHHHHHcCCC----CCcEEEEeeChhhHHHHHHhh
Q 024469 64 SEPLMEVLASLPA----EEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 64 ~~~l~~~i~~l~~----~~~vilvGHSmGG~i~~~~a~ 97 (267)
...|..+++.... ..++++.||||||++|+.+|.
T Consensus 294 l~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 294 LTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3445555554311 248999999999999888874
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.09 E-value=0.043 Score=43.41 Aligned_cols=50 Identities=20% Similarity=0.261 Sum_probs=34.9
Q ss_pred HHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhh------CCCccceEEEEec
Q 024469 61 HAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK------FPHKISVAVFVTA 111 (267)
Q Consensus 61 ~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~------~p~~v~~lvli~~ 111 (267)
.+..+.|.+....= ...+++|+|+|.|+.++..++.. ..++|.++|++.-
T Consensus 65 ~~~~~~i~~~~~~C-P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 65 ANLVRLIEEYAARC-PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGD 120 (179)
T ss_dssp HHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-
T ss_pred HHHHHHHHHHHHhC-CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecC
Confidence 33444444444443 45799999999999999988766 2367888888873
No 204
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.08 E-value=0.058 Score=47.03 Aligned_cols=49 Identities=31% Similarity=0.380 Sum_probs=30.6
Q ss_pred HHHHHHHcC-CCCCcEEEEeeChhhHHHHHHhhhCC-----CccceEEEEeccCC
Q 024469 66 PLMEVLASL-PAEEKVILVGHSLGGVTLALAADKFP-----HKISVAVFVTAFMP 114 (267)
Q Consensus 66 ~l~~~i~~l-~~~~~vilvGHSmGG~i~~~~a~~~p-----~~v~~lvli~~~~~ 114 (267)
.|.+.+..- .+.+|++|||||||+-++......-. ..|..++++.+..+
T Consensus 207 ~LA~~L~~~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 207 VLADALLSRNQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred HHHHHHHHhcCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 344444432 13458999999999986655432222 34788999986443
No 205
>PLN02847 triacylglycerol lipase
Probab=94.84 E-value=0.04 Score=50.87 Aligned_cols=34 Identities=41% Similarity=0.507 Sum_probs=22.7
Q ss_pred CCcEEEEeeChhhHHHHHHhhhC--CCccceEEEEe
Q 024469 77 EEKVILVGHSLGGVTLALAADKF--PHKISVAVFVT 110 (267)
Q Consensus 77 ~~~vilvGHSmGG~i~~~~a~~~--p~~v~~lvli~ 110 (267)
.-+++++||||||.+|+.++... ...+..+.+++
T Consensus 250 dYkLVITGHSLGGGVAALLAilLRe~~~fssi~CyA 285 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTYILREQKEFSSTTCVT 285 (633)
T ss_pred CCeEEEeccChHHHHHHHHHHHHhcCCCCCCceEEE
Confidence 34899999999999888775432 12344444444
No 206
>PLN02761 lipase class 3 family protein
Probab=94.84 E-value=0.039 Score=50.23 Aligned_cols=19 Identities=32% Similarity=0.494 Sum_probs=16.9
Q ss_pred cEEEEeeChhhHHHHHHhh
Q 024469 79 KVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~ 97 (267)
++++.||||||++|+.+|.
T Consensus 295 sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 295 SITVTGHSLGASLALVSAY 313 (527)
T ss_pred eEEEeccchHHHHHHHHHH
Confidence 6999999999999888774
No 207
>PLN02719 triacylglycerol lipase
Probab=94.77 E-value=0.04 Score=50.02 Aligned_cols=19 Identities=42% Similarity=0.681 Sum_probs=17.0
Q ss_pred cEEEEeeChhhHHHHHHhh
Q 024469 79 KVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~ 97 (267)
++++.||||||++|+.+|.
T Consensus 299 sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAY 317 (518)
T ss_pred eEEEecCcHHHHHHHHHHH
Confidence 7999999999999888774
No 208
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.26 E-value=0.33 Score=43.90 Aligned_cols=102 Identities=19% Similarity=0.192 Sum_probs=71.9
Q ss_pred ccceEEEecCCCCChh--------chHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcc------cChHHhhHHHHHHHHc
Q 024469 8 EEKHFVLVHGVNHGAW--------CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDV------HTFHAYSEPLMEVLAS 73 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~--------~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~------~~~~~~~~~l~~~i~~ 73 (267)
+||..++|=|=+.-.. .|-.+++.+ |-.|+-+.+|=+|.|....+.. -+..+...||+++|++
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf---gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF---GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHh---CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 3566677766554332 354455444 4589999999999875332211 1667777888899888
Q ss_pred CCC------CCcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 74 LPA------EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 74 l~~------~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
+.. ..|.|..|-|+-|..++-+=+++|+.|.+-|..++.
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 731 128899999999998888878999999988876653
No 209
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=94.16 E-value=0.23 Score=43.79 Aligned_cols=68 Identities=21% Similarity=0.233 Sum_probs=48.1
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC---CCCCcEEEEeeChhhHHHHHHhhhC
Q 024469 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVGHSLGGVTLALAADKF 99 (267)
Q Consensus 26 ~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~vilvGHSmGG~i~~~~a~~~ 99 (267)
+++..+|+++|+.|+-+|=.-+=+|.+ |-+..++|+..+|+.- .+.++++|||.|.|+=+.-.+-.+.
T Consensus 277 k~v~~~l~~~gvpVvGvdsLRYfW~~r------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L 347 (456)
T COG3946 277 KEVAEALQKQGVPVVGVDSLRYFWSER------TPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRL 347 (456)
T ss_pred HHHHHHHHHCCCceeeeehhhhhhccC------CHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhC
Confidence 458889999999999998543333433 4467777777777654 2446899999999998655554443
No 210
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.14 E-value=0.049 Score=47.84 Aligned_cols=83 Identities=23% Similarity=0.339 Sum_probs=46.3
Q ss_pred eEEEecCCCC-ChhchHHHHHHHhcCCCeEEEeCCCCC-CCCCCCCCcccCh-HHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 11 HFVLVHGVNH-GAWCWYKLKARLVAGGHRVTAVDLAAS-GINMKRIEDVHTF-HAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 11 ~ivlvHG~~~-~~~~w~~~~~~L~~~g~~via~Dl~G~-G~S~~~~~~~~~~-~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
-+||+||+.. ....|.+.+...... +.=..+..+|+ |......+...-+ ...++++.+.+... ..+++-.||||+
T Consensus 82 LvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~-si~kISfvghSL 159 (405)
T KOG4372|consen 82 LVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY-SIEKISFVGHSL 159 (405)
T ss_pred EEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhcc-ccceeeeeeeec
Confidence 6899999987 566787777666443 32223334443 3322222111100 12233344444444 347899999999
Q ss_pred hhHHHHHH
Q 024469 88 GGVTLALA 95 (267)
Q Consensus 88 GG~i~~~~ 95 (267)
||+++..+
T Consensus 160 GGLvar~A 167 (405)
T KOG4372|consen 160 GGLVARYA 167 (405)
T ss_pred CCeeeeEE
Confidence 99965544
No 211
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=94.09 E-value=0.89 Score=32.18 Aligned_cols=83 Identities=20% Similarity=0.215 Sum_probs=55.8
Q ss_pred chHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhh--HHHHHHhhhCCC
Q 024469 24 CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG--VTLALAADKFPH 101 (267)
Q Consensus 24 ~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG--~i~~~~a~~~p~ 101 (267)
.|..+.+.|..+|+..=.+.|+..|.+-...-....-+-=...|..+++.. ...++||||-|=-. -+...+|.++|+
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f-P~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF-PERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC-CCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 466677777777787767777777654321111111134456677888888 66899999999666 255667899999
Q ss_pred ccceEE
Q 024469 102 KISVAV 107 (267)
Q Consensus 102 ~v~~lv 107 (267)
+|.++-
T Consensus 91 ~i~ai~ 96 (100)
T PF09949_consen 91 RILAIY 96 (100)
T ss_pred CEEEEE
Confidence 998874
No 212
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=93.99 E-value=0.079 Score=47.38 Aligned_cols=105 Identities=14% Similarity=0.185 Sum_probs=62.4
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhc-------------------CCCeEEEeCCC-CCCCCCCCCCc--ccChHHhhH
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVA-------------------GGHRVTAVDLA-ASGINMKRIED--VHTFHAYSE 65 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~-------------------~g~~via~Dl~-G~G~S~~~~~~--~~~~~~~~~ 65 (267)
..|.|+.+.|-+..+..|..+. +... +..+++-+|.| |-|.|-..... ..+.++.++
T Consensus 39 ~~Pl~~wlnGGPG~SS~~g~f~-e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~ 117 (415)
T PF00450_consen 39 DDPLILWLNGGPGCSSMWGLFG-ENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAE 117 (415)
T ss_dssp SS-EEEEEE-TTTB-THHHHHC-TTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHH
T ss_pred CccEEEEecCCceecccccccc-ccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHHH
Confidence 3578889999987777664322 1210 12578899988 89988643221 236677777
Q ss_pred HHHHHHHcC----C--CCCcEEEEeeChhhHHHHHHhh----hC------CCccceEEEEeccC
Q 024469 66 PLMEVLASL----P--AEEKVILVGHSLGGVTLALAAD----KF------PHKISVAVFVTAFM 113 (267)
Q Consensus 66 ~l~~~i~~l----~--~~~~vilvGHSmGG~i~~~~a~----~~------p~~v~~lvli~~~~ 113 (267)
++.++|... . ...+++|.|.|+||..+..+|. +. +=.++++++.+++.
T Consensus 118 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 118 DLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred HHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 777766654 2 2348999999999985544432 22 22478999988864
No 213
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=93.75 E-value=0.13 Score=45.44 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=31.3
Q ss_pred CcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccC
Q 024469 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 78 ~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
-|+|++|+|.||.++...|.-.|..|++++=-++++
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 389999999999999999999999999988666543
No 214
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=93.67 E-value=0.3 Score=48.79 Aligned_cols=96 Identities=16% Similarity=0.208 Sum_probs=66.3
Q ss_pred CccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeC
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHS 86 (267)
+.++|+.|||-.-........++..| ..|.+|.--...-...++++.+...++-|+++....|-.|+|.|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 45799999997765555454444433 24666643222113348999999999999988666799999999
Q ss_pred hhhHHHHHHhhhC--CCccceEEEEecc
Q 024469 87 LGGVTLALAADKF--PHKISVAVFVTAF 112 (267)
Q Consensus 87 mGG~i~~~~a~~~--p~~v~~lvli~~~ 112 (267)
+|+.++...|.+. .+....||++++.
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 9999887776432 3345569999864
No 215
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.58 E-value=0.55 Score=39.19 Aligned_cols=55 Identities=18% Similarity=0.188 Sum_probs=45.7
Q ss_pred EEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCC-CCCCCcHHHHHHHHHHHH
Q 024469 209 RVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHM-AMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 209 ~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~-~~~e~p~~~~~~l~~f~~ 264 (267)
+.++..++|..+|....+.+-+..|++++..++ .||- .++-+-+.|.++|.+-+.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~ 364 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLD 364 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHH
Confidence 456789999999997777888889999999999 7886 456788999998877664
No 216
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=93.52 E-value=0.31 Score=43.59 Aligned_cols=59 Identities=12% Similarity=0.114 Sum_probs=44.3
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcC--------------------------CCCeEEEecCCCCCCCCCCcHHHHHHH
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNY--------------------------PVNEVMEIKGGDHMAMLSDPQKLCDCL 259 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~--------------------------p~~~~~~i~~~gH~~~~e~p~~~~~~l 259 (267)
.+++++..|..|.+++.-..+..++.+ .+.+++.|.+|||+++.++|++..+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 388999999999999999888766542 122367889999999999999999999
Q ss_pred HHHHH
Q 024469 260 SQISL 264 (267)
Q Consensus 260 ~~f~~ 264 (267)
.+|++
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99974
No 217
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=93.38 E-value=0.26 Score=41.20 Aligned_cols=59 Identities=15% Similarity=0.236 Sum_probs=45.4
Q ss_pred ccEEEEEeCCCccCChHHHHHHHHcCCC--CeEEEecCCCCCCCCCCcH---HHHHHHHHHHHh
Q 024469 207 VKRVYLVCEEDIGLPKQFQHWMIQNYPV--NEVMEIKGGDHMAMLSDPQ---KLCDCLSQISLK 265 (267)
Q Consensus 207 iP~l~i~g~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~---~~~~~l~~f~~~ 265 (267)
.|.++++|.+|.++|...++.+.+.... .+...+++++|....+.+. +-.+.+.+|+++
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 7999999999999999988877665444 4677888899999876655 444555666655
No 218
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.24 E-value=0.12 Score=45.12 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=28.1
Q ss_pred HHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhh
Q 024469 61 HAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 61 ~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~ 98 (267)
..+-+++..+++.. ..-++++-||||||+.|..+|..
T Consensus 155 ~~~~~~~~~L~~~~-~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELY-PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhc-CCcEEEEecCChHHHHHHHHHHH
Confidence 45666777777766 44589999999999988887643
No 219
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.79 E-value=0.13 Score=47.37 Aligned_cols=35 Identities=29% Similarity=0.557 Sum_probs=26.2
Q ss_pred cChHHhhHHHHHHHHcCC--CCCcEEEEeeChhhHHH
Q 024469 58 HTFHAYSEPLMEVLASLP--AEEKVILVGHSLGGVTL 92 (267)
Q Consensus 58 ~~~~~~~~~l~~~i~~l~--~~~~vilvGHSmGG~i~ 92 (267)
.+++.-+..+++.+.+.+ ..++++-|||||||..+
T Consensus 504 ~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~ 540 (697)
T KOG2029|consen 504 RSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLA 540 (697)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHH
Confidence 467777777777777663 34689999999999743
No 220
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=92.74 E-value=0.086 Score=33.91 Aligned_cols=19 Identities=21% Similarity=0.415 Sum_probs=11.4
Q ss_pred CccceEEEecCCCCChhch
Q 024469 7 MEEKHFVLVHGVNHGAWCW 25 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w 25 (267)
..++||+|.||+..++..|
T Consensus 41 ~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 41 KKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT--EEEEE--TT--GGGG
T ss_pred CCCCcEEEECCcccChHHH
Confidence 3478999999999999998
No 221
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.33 E-value=0.62 Score=38.23 Aligned_cols=73 Identities=21% Similarity=0.161 Sum_probs=46.0
Q ss_pred CCeEEEeCCCC-CCC----CCCCCCcccChHHhhHHHHHHHHcC-CCCCcEEEEeeChhhHHHHHHhhhC-----CC-cc
Q 024469 36 GHRVTAVDLAA-SGI----NMKRIEDVHTFHAYSEPLMEVLASL-PAEEKVILVGHSLGGVTLALAADKF-----PH-KI 103 (267)
Q Consensus 36 g~~via~Dl~G-~G~----S~~~~~~~~~~~~~~~~l~~~i~~l-~~~~~vilvGHSmGG~i~~~~a~~~-----p~-~v 103 (267)
|+++..++.|. ++- .+... ..++++=++.|.+.|++. ...++++++|+|.|+.++..++.+. +. ..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~--~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~ 79 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTY--DESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDD 79 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCcc--chHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCc
Confidence 56777888886 221 11111 236666677777777762 1346899999999999988876542 11 23
Q ss_pred ceEEEEe
Q 024469 104 SVAVFVT 110 (267)
Q Consensus 104 ~~lvli~ 110 (267)
...|+++
T Consensus 80 l~fVl~g 86 (225)
T PF08237_consen 80 LSFVLIG 86 (225)
T ss_pred eEEEEec
Confidence 4566665
No 222
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=91.49 E-value=0.68 Score=40.15 Aligned_cols=58 Identities=17% Similarity=0.174 Sum_probs=44.9
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcCC------------------------C-CeEEEecCCCCCCCCCCcHHHHHHHH
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYP------------------------V-NEVMEIKGGDHMAMLSDPQKLCDCLS 260 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~p------------------------~-~~~~~i~~~gH~~~~e~p~~~~~~l~ 260 (267)
.+++++-.|..|.+++.-..+..++.+. + .+++.|.+|||+++ .+|++..+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4788999999999998877765543221 1 44566778999997 59999999999
Q ss_pred HHHH
Q 024469 261 QISL 264 (267)
Q Consensus 261 ~f~~ 264 (267)
+|+.
T Consensus 312 ~fi~ 315 (319)
T PLN02213 312 RWIS 315 (319)
T ss_pred HHHc
Confidence 9985
No 223
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.42 E-value=0.65 Score=36.17 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=31.6
Q ss_pred CcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 78 ~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
...++-|.||||.-++.+.-++|+.+.++|.+++.
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 46788899999999999999999999999998864
No 224
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=91.16 E-value=0.69 Score=40.12 Aligned_cols=76 Identities=16% Similarity=0.200 Sum_probs=45.0
Q ss_pred eEEEeCCC-CCCCCCCCCC-cc----cChHHhhHHHHHHHHcCC--CCCcEEEEeeChhhHHHHHHhhh----CC-----
Q 024469 38 RVTAVDLA-ASGINMKRIE-DV----HTFHAYSEPLMEVLASLP--AEEKVILVGHSLGGVTLALAADK----FP----- 100 (267)
Q Consensus 38 ~via~Dl~-G~G~S~~~~~-~~----~~~~~~~~~l~~~i~~l~--~~~~vilvGHSmGG~i~~~~a~~----~p----- 100 (267)
+|+-+|.| |-|.|-.... .. .+..++...|.++++... ...+++|.|-|+||..+-.+|.. ..
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 68899999 8888742211 11 122344444555554443 24689999999999855554432 11
Q ss_pred -CccceEEEEeccC
Q 024469 101 -HKISVAVFVTAFM 113 (267)
Q Consensus 101 -~~v~~lvli~~~~ 113 (267)
=.++++++=+++.
T Consensus 83 ~inLkGi~IGNg~t 96 (319)
T PLN02213 83 PINLQGYMLGNPVT 96 (319)
T ss_pred ceeeeEEEeCCCCC
Confidence 1356777766653
No 225
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=90.30 E-value=0.34 Score=45.13 Aligned_cols=103 Identities=14% Similarity=0.188 Sum_probs=68.5
Q ss_pred cceEEEecCCCCCh--hchHHHHHHHhcCCCeEEE-eCCCCCCCCCCC-------CCcccChHHhhHHHHHHHHcC-CCC
Q 024469 9 EKHFVLVHGVNHGA--WCWYKLKARLVAGGHRVTA-VDLAASGINMKR-------IEDVHTFHAYSEPLMEVLASL-PAE 77 (267)
Q Consensus 9 ~~~ivlvHG~~~~~--~~w~~~~~~L~~~g~~via-~Dl~G~G~S~~~-------~~~~~~~~~~~~~l~~~i~~l-~~~ 77 (267)
.|.+|-.||...=+ -.|+.-.--|-+.|+ |+| .|.||=|.-+.. .....+++|+-....-+++.= -.-
T Consensus 470 ~P~LLygYGay~isl~p~f~~srl~lld~G~-Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~ 548 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISLDPSFRASRLSLLDRGW-VLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQP 548 (712)
T ss_pred CceEEEEecccceeeccccccceeEEEecce-EEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCc
Confidence 45666666654322 135443333445675 554 499997754321 112348888888888888742 123
Q ss_pred CcEEEEeeChhhHHHHHHhhhCCCccceEEEEecc
Q 024469 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 78 ~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
++..+.|-|-||+++...+.++|+++..+|+--|+
T Consensus 549 ~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 549 SKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPF 583 (712)
T ss_pred cceeEecccCccchhHHHhccCchHhhhhhhcCcc
Confidence 58999999999999999999999999998875554
No 226
>PLN02209 serine carboxypeptidase
Probab=90.20 E-value=0.79 Score=41.59 Aligned_cols=58 Identities=19% Similarity=0.229 Sum_probs=45.7
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcC------------------------CC-CeEEEecCCCCCCCCCCcHHHHHHHH
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNY------------------------PV-NEVMEIKGGDHMAMLSDPQKLCDCLS 260 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~------------------------p~-~~~~~i~~~gH~~~~e~p~~~~~~l~ 260 (267)
.+++++..|..|.+++.-..+..++.+ .+ .+++.|.+|||+++ .||++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 578999999999999988777654321 12 45667888999996 69999999999
Q ss_pred HHHH
Q 024469 261 QISL 264 (267)
Q Consensus 261 ~f~~ 264 (267)
+|+.
T Consensus 430 ~fi~ 433 (437)
T PLN02209 430 RWIS 433 (437)
T ss_pred HHHc
Confidence 9984
No 227
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=90.16 E-value=2.8 Score=39.09 Aligned_cols=81 Identities=19% Similarity=0.196 Sum_probs=54.4
Q ss_pred HHHHHhcCCCeEEEeCCCCCCCCCCC-------CCcccChHHhhHHHHHHHHcC-CCCCcEEEEeeChhhHHHHHHhhhC
Q 024469 28 LKARLVAGGHRVTAVDLAASGINMKR-------IEDVHTFHAYSEPLMEVLASL-PAEEKVILVGHSLGGVTLALAADKF 99 (267)
Q Consensus 28 ~~~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~~~~l~~~i~~l-~~~~~vilvGHSmGG~i~~~~a~~~ 99 (267)
....| ++|.--+...+||=|.=... ......++|+.+...++++.= .--+++-+-|-|=||++...+..|+
T Consensus 443 ~~~WL-erGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQr 521 (648)
T COG1505 443 RKLWL-ERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQR 521 (648)
T ss_pred hHHHH-hcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccC
Confidence 34445 56766667799997753311 112236677777777766632 0114688899999999888888899
Q ss_pred CCccceEEEE
Q 024469 100 PHKISVAVFV 109 (267)
Q Consensus 100 p~~v~~lvli 109 (267)
|+.+.++|+-
T Consensus 522 PelfgA~v~e 531 (648)
T COG1505 522 PELFGAAVCE 531 (648)
T ss_pred hhhhCceeec
Confidence 9999888764
No 228
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=89.90 E-value=0.52 Score=42.80 Aligned_cols=104 Identities=12% Similarity=0.113 Sum_probs=60.1
Q ss_pred cceEEEecCCCCChhchHHHHHHHhc-------------------CCCeEEEeCCC-CCCCCCCCCC-ccc-------Ch
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVA-------------------GGHRVTAVDLA-ASGINMKRIE-DVH-------TF 60 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~-------------------~g~~via~Dl~-G~G~S~~~~~-~~~-------~~ 60 (267)
.|.|+.+-|-+..+..|-.+.+ |.. ..-.++-+|.| |-|.|-...+ ... ++
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~e-lGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGE-LGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CceEEEecCCCChHhhhhhhhh-cCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhH
Confidence 5778888888877777765532 211 01267888977 7887753111 111 33
Q ss_pred HHhhHHHHHHHHcCC-CCCcEEEEeeChhhHHHHHHhhhCCC---ccceEEEEeccC
Q 024469 61 HAYSEPLMEVLASLP-AEEKVILVGHSLGGVTLALAADKFPH---KISVAVFVTAFM 113 (267)
Q Consensus 61 ~~~~~~l~~~i~~l~-~~~~vilvGHSmGG~i~~~~a~~~p~---~v~~lvli~~~~ 113 (267)
+.+.+-+.+.+-+.. ...+.+|+|-|+||.-+..+|...-+ -..++|++.+..
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 333333333333332 23589999999999866665543222 245677776644
No 229
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=89.39 E-value=2.1 Score=37.59 Aligned_cols=87 Identities=20% Similarity=0.238 Sum_probs=63.1
Q ss_pred ccceEEEecCCCCCh-------hchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcE
Q 024469 8 EEKHFVLVHGVNHGA-------WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKV 80 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~-------~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v 80 (267)
....|||+||-||++ ..|..++..+++++ -+-.+|..-.|.-+ .+++.+.-|-.+++.. +-
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~-------GleeDa~~lR~~a~~~----~~ 237 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFAD-------GLEEDAYALRLFAEVG----PE 237 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhcc-------chHHHHHHHHHHHHhC----Cc
Confidence 356899999999876 47999999998876 46778988777543 2455555565555533 33
Q ss_pred EEEeeChhhHHHHHHhhhCCCccceEEEEec
Q 024469 81 ILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 81 ilvGHSmGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
++|.-|..-. ...|.+||.++.+++.
T Consensus 238 ~lva~S~SKn-----fgLYgERVGa~~vva~ 263 (396)
T COG1448 238 LLVASSFSKN-----FGLYGERVGALSVVAE 263 (396)
T ss_pred EEEEehhhhh-----hhhhhhccceeEEEeC
Confidence 8899887665 2347799999999874
No 230
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=89.23 E-value=0.75 Score=41.70 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=45.7
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcC------------------------CC-CeEEEecCCCCCCCCCCcHHHHHHHH
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNY------------------------PV-NEVMEIKGGDHMAMLSDPQKLCDCLS 260 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~------------------------p~-~~~~~i~~~gH~~~~e~p~~~~~~l~ 260 (267)
.+++++-.|..|.+++.-..+..++.+ .+ .+++.|.+|||+++ .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 578999999999999988777654322 11 34567788999997 69999999999
Q ss_pred HHHH
Q 024469 261 QISL 264 (267)
Q Consensus 261 ~f~~ 264 (267)
+|+.
T Consensus 426 ~Fi~ 429 (433)
T PLN03016 426 RWIS 429 (433)
T ss_pred HHHc
Confidence 9984
No 231
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=88.84 E-value=14 Score=31.60 Aligned_cols=93 Identities=14% Similarity=0.058 Sum_probs=60.9
Q ss_pred CCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH-----H
Q 024469 17 GVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV-----T 91 (267)
Q Consensus 17 G~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~-----i 91 (267)
=.++.+.--+...+.|-.. ..|+.-|+--.-.-+- ..+..+++||.+.+.+.+..++. ++++++-.-=+. +
T Consensus 112 msGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~-~~G~FdldDYIdyvie~~~~~Gp--~~hv~aVCQP~vPvLAAi 187 (415)
T COG4553 112 MSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPL-EAGHFDLDDYIDYVIEMINFLGP--DAHVMAVCQPTVPVLAAI 187 (415)
T ss_pred ccccHHHHHHHHHHHhccc-cceeEeeccccceeec-ccCCccHHHHHHHHHHHHHHhCC--CCcEEEEecCCchHHHHH
Confidence 3466777778777777543 6888888864322221 22457999999999999999964 466666555443 2
Q ss_pred HHHHhhhCCCccceEEEEeccC
Q 024469 92 LALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 92 ~~~~a~~~p~~v~~lvli~~~~ 113 (267)
++..+...|..=..++++.+..
T Consensus 188 sLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 188 SLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred HHHHhcCCCCCCceeeeecCcc
Confidence 3333444566667888888643
No 232
>PLN02209 serine carboxypeptidase
Probab=88.56 E-value=1.6 Score=39.64 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=57.7
Q ss_pred cceEEEecCCCCChhchHHHH---H-------------HHhc------CCCeEEEeCCC-CCCCCCCCCC-cccChHHhh
Q 024469 9 EKHFVLVHGVNHGAWCWYKLK---A-------------RLVA------GGHRVTAVDLA-ASGINMKRIE-DVHTFHAYS 64 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~---~-------------~L~~------~g~~via~Dl~-G~G~S~~~~~-~~~~~~~~~ 64 (267)
.|.|+.+-|.+..+..+..+. | .|.. +-.+++-+|.| |.|.|-.... ...+-++.+
T Consensus 68 ~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~a 147 (437)
T PLN02209 68 DPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTSEV 147 (437)
T ss_pred CCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHHH
Confidence 477888888865555443321 1 1111 11478888977 8888742211 111222334
Q ss_pred HHHHH----HHHcCCC--CCcEEEEeeChhhHHHHHHhhh---CC-------CccceEEEEeccC
Q 024469 65 EPLME----VLASLPA--EEKVILVGHSLGGVTLALAADK---FP-------HKISVAVFVTAFM 113 (267)
Q Consensus 65 ~~l~~----~i~~l~~--~~~vilvGHSmGG~i~~~~a~~---~p-------~~v~~lvli~~~~ 113 (267)
+++.+ +++.... ..+..|.|.|+||..+-.+|.. .. =.++++++.+++.
T Consensus 148 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 148 KKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 44444 4443322 2489999999999744444322 11 1356888887754
No 233
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=88.32 E-value=0.84 Score=38.51 Aligned_cols=35 Identities=26% Similarity=0.524 Sum_probs=24.5
Q ss_pred HHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCC
Q 024469 66 PLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (267)
Q Consensus 66 ~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p 100 (267)
||...++.+-...++.|-|||+||.+|..+-.++.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34444444434468999999999999888876653
No 234
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.32 E-value=0.84 Score=38.51 Aligned_cols=35 Identities=26% Similarity=0.524 Sum_probs=24.5
Q ss_pred HHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCC
Q 024469 66 PLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (267)
Q Consensus 66 ~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p 100 (267)
||...++.+-...++.|-|||+||.+|..+-.++.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34444444434468999999999999888876653
No 235
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=88.16 E-value=0.95 Score=38.47 Aligned_cols=74 Identities=20% Similarity=0.143 Sum_probs=39.9
Q ss_pred ccceEEEecC--CCCCh--------------hchHHHHHHHhcCCCe--EEEeCCCCCCCCCCCCCcccChHHhhHHHHH
Q 024469 8 EEKHFVLVHG--VNHGA--------------WCWYKLKARLVAGGHR--VTAVDLAASGINMKRIEDVHTFHAYSEPLME 69 (267)
Q Consensus 8 ~~~~ivlvHG--~~~~~--------------~~w~~~~~~L~~~g~~--via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~ 69 (267)
.+.++|++|- .+.+. ..+...+..+.+.|.. =|.+| ||+|.+.... + + -.+..
T Consensus 132 ~~~~vVlmh~~g~p~~~~~~~~y~dv~~~v~~~l~~~i~~a~~~GI~~~~IilD-PGiGF~k~~~-~--n-----~~ll~ 202 (282)
T PRK11613 132 TGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEAAGIAKEKLLLD-PGFGFGKNLS-H--N-----YQLLA 202 (282)
T ss_pred cCCCEEEEcCCCCCCccccCCCcccHHHHHHHHHHHHHHHHHHcCCChhhEEEe-CCCCcCCCHH-H--H-----HHHHH
Confidence 3578899884 32221 1234445555567774 67888 7888654221 1 1 12222
Q ss_pred HHHcCCCCCcEEEEeeChhhH
Q 024469 70 VLASLPAEEKVILVGHSLGGV 90 (267)
Q Consensus 70 ~i~~l~~~~~vilvGHSmGG~ 90 (267)
-++.+...+-++|+|+|==..
T Consensus 203 ~l~~l~~lg~Pilvg~SRKsf 223 (282)
T PRK11613 203 RLAEFHHFNLPLLVGMSRKSM 223 (282)
T ss_pred HHHHHHhCCCCEEEEecccHH
Confidence 233232235689999994444
No 236
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=87.77 E-value=0.94 Score=42.50 Aligned_cols=104 Identities=14% Similarity=0.230 Sum_probs=66.0
Q ss_pred cceEEEecCCCCCh-h-chHHHHHHHhcCCCeEEEe-CCCCCCCCCC-------CCCcccChHHhhHHHHHHHHcC-CCC
Q 024469 9 EKHFVLVHGVNHGA-W-CWYKLKARLVAGGHRVTAV-DLAASGINMK-------RIEDVHTFHAYSEPLMEVLASL-PAE 77 (267)
Q Consensus 9 ~~~ivlvHG~~~~~-~-~w~~~~~~L~~~g~~via~-Dl~G~G~S~~-------~~~~~~~~~~~~~~l~~~i~~l-~~~ 77 (267)
.|.++..=|.=..+ . .|....=-|.++|+ |+|+ .-||=|.=+. ......|+.|+.+....+++.= ...
T Consensus 448 ~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGf-iyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~ 526 (682)
T COG1770 448 APLLLYGYGAYGISMDPSFSIARLSLLDRGF-VYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSP 526 (682)
T ss_pred CcEEEEEeccccccCCcCcccceeeeecCce-EEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCc
Confidence 45555555552111 1 23322223347775 6665 4466554332 1222348888888887777643 122
Q ss_pred CcEEEEeeChhhHHHHHHhhhCCCccceEEEEeccC
Q 024469 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (267)
Q Consensus 78 ~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~~~ 113 (267)
+.++++|-|-||+++...+.+.|+++.++|+--|++
T Consensus 527 ~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFV 562 (682)
T COG1770 527 DRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFV 562 (682)
T ss_pred cceEEeccCchhHHHHHHHhhChhhhhheeecCCcc
Confidence 479999999999999999999999999999866654
No 237
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=87.66 E-value=2 Score=38.93 Aligned_cols=77 Identities=17% Similarity=0.248 Sum_probs=45.9
Q ss_pred CeEEEeCCC-CCCCCCCCCC-c-c---cChHHhhHHHHHHHHcCC--CCCcEEEEeeChhhHHHHHHhhh----C-----
Q 024469 37 HRVTAVDLA-ASGINMKRIE-D-V---HTFHAYSEPLMEVLASLP--AEEKVILVGHSLGGVTLALAADK----F----- 99 (267)
Q Consensus 37 ~~via~Dl~-G~G~S~~~~~-~-~---~~~~~~~~~l~~~i~~l~--~~~~vilvGHSmGG~i~~~~a~~----~----- 99 (267)
.+++-+|.| |.|.|-.... . . .+.+++...|..+++... ...++.|.|.|+||..+-.+|.. .
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 578899977 8898742211 1 1 122344445555555442 23689999999999854444432 1
Q ss_pred -CCccceEEEEeccC
Q 024469 100 -PHKISVAVFVTAFM 113 (267)
Q Consensus 100 -p~~v~~lvli~~~~ 113 (267)
+=.++++++-++..
T Consensus 196 ~~inLkGi~iGNg~t 210 (433)
T PLN03016 196 PPINLQGYMLGNPVT 210 (433)
T ss_pred CcccceeeEecCCCc
Confidence 11467888877653
No 238
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.38 E-value=1.8 Score=39.83 Aligned_cols=83 Identities=16% Similarity=0.207 Sum_probs=57.6
Q ss_pred HHHHHhcCCCeEEEeCCCCCCCCCC----CC-Cccc--------ChHHhhHHHHHHHHcCC--CCCcEEEEeeChhhHHH
Q 024469 28 LKARLVAGGHRVTAVDLAASGINMK----RI-EDVH--------TFHAYSEPLMEVLASLP--AEEKVILVGHSLGGVTL 92 (267)
Q Consensus 28 ~~~~L~~~g~~via~Dl~G~G~S~~----~~-~~~~--------~~~~~~~~l~~~i~~l~--~~~~vilvGHSmGG~i~ 92 (267)
+...| .+||-+++=| -||..+.. .. .+.. .+.+.+..-++++++.- .-+.-...|.|-||--+
T Consensus 52 ~~~~~-~~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqg 129 (474)
T PF07519_consen 52 MATAL-ARGYATASTD-SGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQG 129 (474)
T ss_pred cchhh-hcCeEEEEec-CCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchH
Confidence 55666 4689888888 68876532 11 1111 33333444455555552 22568999999999999
Q ss_pred HHHhhhCCCccceEEEEecc
Q 024469 93 ALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 93 ~~~a~~~p~~v~~lvli~~~ 112 (267)
+..|+++|+.++++|.-+|.
T Consensus 130 l~~AQryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 130 LMAAQRYPEDFDGILAGAPA 149 (474)
T ss_pred HHHHHhChhhcCeEEeCCch
Confidence 99999999999999998874
No 239
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=86.36 E-value=2.2 Score=39.74 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=32.7
Q ss_pred hHHHHHHHHcCCCC-CcEEEEeeChhhHHHHHHhh--hCCCccceEEEEecc
Q 024469 64 SEPLMEVLASLPAE-EKVILVGHSLGGVTLALAAD--KFPHKISVAVFVTAF 112 (267)
Q Consensus 64 ~~~l~~~i~~l~~~-~~vilvGHSmGG~i~~~~a~--~~p~~v~~lvli~~~ 112 (267)
.+.+.+-|...++. ++++|.|||-||..+..... ....++.+.|.+++.
T Consensus 180 L~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 180 LRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 44566666666432 47999999999997766542 223567777777653
No 240
>PRK12467 peptide synthase; Provisional
Probab=85.13 E-value=6.3 Score=45.85 Aligned_cols=101 Identities=15% Similarity=0.078 Sum_probs=69.9
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhh
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG 89 (267)
+.+++.|........+..+...|.. ...|+++..++.-..+. ...+++..+....+.+.......+..+.|+|+||
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCC-CCcEEEEeccccccccC---CccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 4599999998888888888888854 46888888776533222 1236677666666666655344589999999999
Q ss_pred HHHHHHhh---hCCCccceEEEEeccCC
Q 024469 90 VTLALAAD---KFPHKISVAVFVTAFMP 114 (267)
Q Consensus 90 ~i~~~~a~---~~p~~v~~lvli~~~~~ 114 (267)
.++..++. +..+.+.-+.+++...|
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~~~~~ 3796 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFDNTLP 3796 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEecccc
Confidence 98776653 34566666666664444
No 241
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=83.91 E-value=5.5 Score=32.07 Aligned_cols=69 Identities=20% Similarity=0.160 Sum_probs=46.7
Q ss_pred HHhcCCC-eEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh----hhHHHHHHhhhCC-Cccc
Q 024469 31 RLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL----GGVTLALAADKFP-HKIS 104 (267)
Q Consensus 31 ~L~~~g~-~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm----GG~i~~~~a~~~p-~~v~ 104 (267)
.+...|. +|+..|.++. ..|+.+.|++.|.+++++.+ -.++|+|||- |+.++...|.+.. ..+.
T Consensus 71 ~l~~~G~d~V~~~~~~~~--------~~~~~e~~a~al~~~i~~~~--p~lVL~~~t~~~~~grdlaprlAarLga~lvs 140 (202)
T cd01714 71 EALAMGADRAILVSDRAF--------AGADTLATAKALAAAIKKIG--VDLILTGKQSIDGDTGQVGPLLAELLGWPQIT 140 (202)
T ss_pred HHHHcCCCEEEEEecccc--------cCCChHHHHHHHHHHHHHhC--CCEEEEcCCcccCCcCcHHHHHHHHhCCCccc
Confidence 3434454 7777776532 23577899999999998763 5899999999 6678888776543 2344
Q ss_pred eEEEE
Q 024469 105 VAVFV 109 (267)
Q Consensus 105 ~lvli 109 (267)
.++-+
T Consensus 141 dv~~l 145 (202)
T cd01714 141 YVSKI 145 (202)
T ss_pred eEEEE
Confidence 44443
No 242
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=83.21 E-value=2.7 Score=33.49 Aligned_cols=62 Identities=10% Similarity=0.072 Sum_probs=46.3
Q ss_pred CCCccEEEEEeCCCccCChHHHHH---HHHcCCCC--eEEEecCCCCCCCCCCc---HHHHHHHHHHHHh
Q 024469 204 YGSVKRVYLVCEEDIGLPKQFQHW---MIQNYPVN--EVMEIKGGDHMAMLSDP---QKLCDCLSQISLK 265 (267)
Q Consensus 204 ~~~iP~l~i~g~~D~~~~~~~~~~---~~~~~p~~--~~~~i~~~gH~~~~e~p---~~~~~~l~~f~~~ 265 (267)
..+++.+.|-|+.|.|+.+-.... +...+|.. ..++.++|||.-...-+ +++.-.|++|+.+
T Consensus 132 I~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 132 IRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 346678889999999998776553 44556643 35778999999877554 7888888888876
No 243
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=83.03 E-value=8.1 Score=31.49 Aligned_cols=103 Identities=19% Similarity=0.134 Sum_probs=56.8
Q ss_pred cceEEEecCCCCChhchHH----HHHHHhcCCCeEEEeCCCC---------CCCCC---CCC----------------Cc
Q 024469 9 EKHFVLVHGVNHGAWCWYK----LKARLVAGGHRVTAVDLAA---------SGINM---KRI----------------ED 56 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~----~~~~L~~~g~~via~Dl~G---------~G~S~---~~~----------------~~ 56 (267)
.+-|+||||+-.+...++. +...|++. +..+-+|-|= ...+. .+. ..
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 4689999999877765543 33444433 5555555441 11110 000 01
Q ss_pred c-cChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhh--hCCC------ccceEEEEeccCC
Q 024469 57 V-HTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAAD--KFPH------KISVAVFVTAFMP 114 (267)
Q Consensus 57 ~-~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~--~~p~------~v~~lvli~~~~~ 114 (267)
. ..++.-.+.|.+.++..+.- -=|+|.|-|+.++...+. +.+. .++=+|+++++.+
T Consensus 84 ~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~ 148 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKF 148 (230)
T ss_pred cccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCC
Confidence 1 13444456677777766432 357899999998777765 1111 2455677776543
No 244
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=83.01 E-value=4.9 Score=35.67 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=30.3
Q ss_pred EEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCC
Q 024469 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGIN 50 (267)
Q Consensus 12 ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S 50 (267)
|+|||....+. |+.+++.|.+.||.|..+-+.+.+..
T Consensus 2 il~~~~~~p~~--~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFPGQ--FRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCchh--HHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 79999887655 78999999999999998877766543
No 245
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=82.37 E-value=14 Score=26.63 Aligned_cols=74 Identities=22% Similarity=0.261 Sum_probs=48.8
Q ss_pred eEEEecCCCCChhchHHHHHHHhcC-CCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhh
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~~-g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG 89 (267)
-|+.-|| .-+......+..+... ...+.+++++ . ..+++++.+.+.+.++.+...+.++++--=+||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~--------~--~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY--------P--DESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET--------T--TSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc--------C--CCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 4788899 3445566667776554 3478888875 1 247789999999999888544556555555555
Q ss_pred HHHHHHh
Q 024469 90 VTLALAA 96 (267)
Q Consensus 90 ~i~~~~a 96 (267)
.....++
T Consensus 70 sp~n~a~ 76 (116)
T PF03610_consen 70 SPFNEAA 76 (116)
T ss_dssp HHHHHHH
T ss_pred ccchHHH
Confidence 5444443
No 246
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=81.02 E-value=5.1 Score=36.50 Aligned_cols=58 Identities=14% Similarity=0.182 Sum_probs=45.0
Q ss_pred ccEEEEEeCCCccCChHHHHHHHHcC---------C----------------CCeEEEecCCCCCCCCCCcHHHHHHHHH
Q 024469 207 VKRVYLVCEEDIGLPKQFQHWMIQNY---------P----------------VNEVMEIKGGDHMAMLSDPQKLCDCLSQ 261 (267)
Q Consensus 207 iP~l~i~g~~D~~~~~~~~~~~~~~~---------p----------------~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 261 (267)
+++++.-|+.|.++|.-..+..++.. | +..+..|.||||+++.++|++-...+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 68888899999999987776543211 1 1224778899999999999999999999
Q ss_pred HHH
Q 024469 262 ISL 264 (267)
Q Consensus 262 f~~ 264 (267)
|+.
T Consensus 444 fl~ 446 (454)
T KOG1282|consen 444 FLN 446 (454)
T ss_pred HHc
Confidence 884
No 247
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=77.63 E-value=8.1 Score=31.91 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=20.8
Q ss_pred CCCeEEEecCCCCCCCCCCcHHHHHHHHH
Q 024469 233 PVNEVMEIKGGDHMAMLSDPQKLCDCLSQ 261 (267)
Q Consensus 233 p~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 261 (267)
+.--+..+.+.-+..+-++++.+.+.+.+
T Consensus 158 ~~pvl~~~~~~D~~~p~~~~~~~~~~~~~ 186 (236)
T COG0412 158 KVPVLLHLAGEDPYIPAADVDALAAALED 186 (236)
T ss_pred cCcEEEEecccCCCCChhHHHHHHHHHHh
Confidence 33346667767788888888888887755
No 248
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=77.22 E-value=22 Score=25.81 Aligned_cols=73 Identities=21% Similarity=0.217 Sum_probs=47.8
Q ss_pred eEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~ 90 (267)
.|+.-|| .-+......+..+....-.+.+++++ . ..+++++.+.+.+.++.....+.++++--=+||.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~--------~--~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP--------P--GESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC--------C--CCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5788899 34444556666664333478888886 2 1367888899999998884445666666555887
Q ss_pred HHHHH
Q 024469 91 TLALA 95 (267)
Q Consensus 91 i~~~~ 95 (267)
+...+
T Consensus 71 p~n~~ 75 (122)
T cd00006 71 PNNAA 75 (122)
T ss_pred HHHHH
Confidence 54433
No 249
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=75.55 E-value=2.2 Score=36.82 Aligned_cols=30 Identities=33% Similarity=0.428 Sum_probs=23.3
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhh
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~ 97 (267)
+.++++.. +.++-+++|||+|=..++.+|.
T Consensus 74 l~~~l~~~-Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSW-GIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHT-THCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhccc-ccccceeeccchhhHHHHHHCC
Confidence 55666777 4689999999999997776654
No 250
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=75.50 E-value=31 Score=30.89 Aligned_cols=99 Identities=17% Similarity=0.131 Sum_probs=68.0
Q ss_pred EEEecCCCCChh-chHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC----------------------cccChHHhhHHHH
Q 024469 12 FVLVHGVNHGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIE----------------------DVHTFHAYSEPLM 68 (267)
Q Consensus 12 ivlvHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~----------------------~~~~~~~~~~~l~ 68 (267)
-|+|=|.+.+.. .+.++...+.+.|.+|+.+|.-=.|.+....+ ....++.+++-+.
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 355557776664 57789999999999999999654443322111 0113344455566
Q ss_pred HHHHcCC---CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEe
Q 024469 69 EVLASLP---AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVT 110 (267)
Q Consensus 69 ~~i~~l~---~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~ 110 (267)
.++..+. ...-++=+|=|.|..+++.+.+..|=-|-++++..
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST 127 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVST 127 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEEc
Confidence 6666662 24568899999999999999988898888888755
No 251
>PRK02399 hypothetical protein; Provisional
Probab=74.83 E-value=29 Score=31.05 Aligned_cols=98 Identities=19% Similarity=0.139 Sum_probs=66.5
Q ss_pred EEecCCCCChh-chHHHHHHHhcCCCeEEEeCCCCCCCCCCCC----------------------CcccChHHhhHHHHH
Q 024469 13 VLVHGVNHGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRI----------------------EDVHTFHAYSEPLME 69 (267)
Q Consensus 13 vlvHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~----------------------~~~~~~~~~~~~l~~ 69 (267)
|+|=|.+.+.. ...++...+.+.|.+|+.+|.-..|...... +...-++.+++-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 66668877664 5777888888889999999984444211110 011123444455555
Q ss_pred HHHcC---CCCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEe
Q 024469 70 VLASL---PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVT 110 (267)
Q Consensus 70 ~i~~l---~~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~ 110 (267)
+++.| +...-++-+|=|+|..+++.+.+..|=-|-++++..
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVST 129 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVST 129 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEEc
Confidence 66543 234578999999999999999888898888887755
No 252
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=74.20 E-value=17 Score=29.30 Aligned_cols=33 Identities=27% Similarity=0.322 Sum_probs=23.4
Q ss_pred eEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCC
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~ 45 (267)
++..+-|...+ .=+.+...|+.+|+||++.|+.
T Consensus 15 k~~~vtGg~sG--IGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 15 KVAAVTGGSSG--IGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred ceeEEecCCch--HHHHHHHHHHhcCcEEEEeecc
Confidence 45556555433 3467888999999999988654
No 253
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=73.26 E-value=4.1 Score=34.63 Aligned_cols=30 Identities=33% Similarity=0.420 Sum_probs=22.4
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhh
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~ 97 (267)
+.++++.+ +.++-.++|||+|-..++.++.
T Consensus 72 ~~~~l~~~-Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSW-GVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHc-CCcccEEEecCHHHHHHHHHhC
Confidence 44556666 5578899999999997776654
No 254
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=72.95 E-value=4.3 Score=34.53 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=22.5
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhh
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~ 97 (267)
+.+++++. +.++..++|||+|=..++.++.
T Consensus 66 l~~~l~~~-g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLAL-LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhc-CCCCcEEeecCHHHHHHHHHhC
Confidence 44556666 4579999999999987776653
No 255
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=72.23 E-value=4.5 Score=34.19 Aligned_cols=31 Identities=29% Similarity=0.265 Sum_probs=22.6
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhh
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~ 97 (267)
+.+.+++.++.++..++|||+|=.+++.+|.
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 3445555633678999999999987777664
No 256
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=71.69 E-value=12 Score=32.04 Aligned_cols=81 Identities=25% Similarity=0.159 Sum_probs=44.8
Q ss_pred HHHHHhcCCCeEEEeCCCCCCCCCCCCC--cccChHHhhHHHHHHHHcCC--CCCcEEEEeeChhhHHHHHHhhhC----
Q 024469 28 LKARLVAGGHRVTAVDLAASGINMKRIE--DVHTFHAYSEPLMEVLASLP--AEEKVILVGHSLGGVTLALAADKF---- 99 (267)
Q Consensus 28 ~~~~L~~~g~~via~Dl~G~G~S~~~~~--~~~~~~~~~~~l~~~i~~l~--~~~~vilvGHSmGG~i~~~~a~~~---- 99 (267)
+...| ++||-|+++|..|-|. .-... ..+.+-|-++...++...++ ...++.++|||=||..+..+|+..
T Consensus 19 l~~~L-~~GyaVv~pDY~Glg~-~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YA 96 (290)
T PF03583_consen 19 LAAWL-ARGYAVVAPDYEGLGT-PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYA 96 (290)
T ss_pred HHHHH-HCCCEEEecCCCCCCC-cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhC
Confidence 45555 6799999999999987 21110 11122222222222221111 135899999999999766555432
Q ss_pred CCc---cceEEEEe
Q 024469 100 PHK---ISVAVFVT 110 (267)
Q Consensus 100 p~~---v~~lvli~ 110 (267)
||. |.+.+..+
T Consensus 97 peL~~~l~Gaa~gg 110 (290)
T PF03583_consen 97 PELNRDLVGAAAGG 110 (290)
T ss_pred cccccceeEEeccC
Confidence 443 45555433
No 257
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=70.73 E-value=35 Score=30.56 Aligned_cols=72 Identities=14% Similarity=0.163 Sum_probs=44.4
Q ss_pred ceEEEecCCCCChh---chHHHHHHHhcCCCeEEEeCCCC---CCCCCCCCCcccChHHhhHHHHHHHHc---CCCCCcE
Q 024469 10 KHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLAA---SGINMKRIEDVHTFHAYSEPLMEVLAS---LPAEEKV 80 (267)
Q Consensus 10 ~~ivlvHG~~~~~~---~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~~~~~~~~~~~~~l~~~i~~---l~~~~~v 80 (267)
.|+|++.-.....| .....+..|++.|+.|+-|. +| +|..+. +...+.++..+.+.+.+.. + .++++
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~-~g~~ac~~~g~--g~~~~~~~i~~~v~~~~~~~~~~-~~~~v 188 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPD-SGLLACGDEGK--GRLAEPETIVKAAEREFSPKEDL-EGKRV 188 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCC-CcccccccccC--CCCCCHHHHHHHHHHHHhhcccc-CCceE
Confidence 68888887543333 34666777888888776554 44 355442 1245778888888877743 4 33555
Q ss_pred EEEee
Q 024469 81 ILVGH 85 (267)
Q Consensus 81 ilvGH 85 (267)
++-|=
T Consensus 189 lit~g 193 (390)
T TIGR00521 189 LITAG 193 (390)
T ss_pred EEecC
Confidence 55555
No 258
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=69.04 E-value=10 Score=27.66 Aligned_cols=34 Identities=32% Similarity=0.558 Sum_probs=22.2
Q ss_pred cceEEEecCC-CCC------------hhchHH-----------HHHHHhcCCCeEEEe
Q 024469 9 EKHFVLVHGV-NHG------------AWCWYK-----------LKARLVAGGHRVTAV 42 (267)
Q Consensus 9 ~~~ivlvHG~-~~~------------~~~w~~-----------~~~~L~~~g~~via~ 42 (267)
...+|+|||- ||+ ...|.. ....|.+.|++|+-+
T Consensus 56 ~klaIfVDGcfWHgh~c~~~~~pk~n~~fW~~Ki~~n~~rD~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 56 YRCVIFIHGCFWHGHHCYLGKVPKTRTDFWSPKIEKNVERDRRVNSRLQELGWRVLRV 113 (117)
T ss_pred CCEEEEEcccccccCCcccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCEEEEE
Confidence 4689999995 343 233433 445677789999854
No 259
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=68.51 E-value=55 Score=29.45 Aligned_cols=73 Identities=14% Similarity=0.166 Sum_probs=44.5
Q ss_pred cceEEEecCCCCChh---chHHHHHHHhcCCCeEEEeCCCC---CCCCCCCCCcccChHHhhHHHHHHHH--cCCCCCcE
Q 024469 9 EKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLAA---SGINMKRIEDVHTFHAYSEPLMEVLA--SLPAEEKV 80 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~---~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~~~~~~~~~~~~~l~~~i~--~l~~~~~v 80 (267)
+.|+|++.-.....+ .....+..|.+.|+.|+-|+ +| +|..+. +...+.++..+.+...+. .+ .++++
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~--gr~~~~~~I~~~~~~~~~~~~l-~gk~v 191 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGP--GRMAEPEEIVAAAERALSPKDL-AGKRV 191 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCC--CCCCCHHHHHHHHHHHhhhccc-CCCEE
Confidence 568888886543333 25566778888899888654 55 344432 234466777777777663 34 33455
Q ss_pred EEEee
Q 024469 81 ILVGH 85 (267)
Q Consensus 81 ilvGH 85 (267)
++-|=
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 55565
No 260
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=67.44 E-value=10 Score=34.61 Aligned_cols=60 Identities=18% Similarity=0.222 Sum_probs=37.7
Q ss_pred eEEEeCCC-CCCCCC--CCC----CcccChHHhhHHHHHHHHcCC--CCCcEEEEeeChhhHHHHHHhh
Q 024469 38 RVTAVDLA-ASGINM--KRI----EDVHTFHAYSEPLMEVLASLP--AEEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 38 ~via~Dl~-G~G~S~--~~~----~~~~~~~~~~~~l~~~i~~l~--~~~~vilvGHSmGG~i~~~~a~ 97 (267)
+++-+|-| |-|.|= .+. ++..+-.+.-..|.++++... ..+++.|.|-|++|..+-.+|+
T Consensus 119 NiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 119 NILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred cEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 68888999 778753 221 222233444455566666553 2368999999999986555543
No 261
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=66.13 E-value=6.6 Score=34.25 Aligned_cols=94 Identities=15% Similarity=0.237 Sum_probs=61.6
Q ss_pred ccccCCccceEEEecCCCCChh-------chHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC
Q 024469 2 EEVVGMEEKHFVLVHGVNHGAW-------CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (267)
Q Consensus 2 ~~~~~~~~~~ivlvHG~~~~~~-------~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l 74 (267)
|+.....+..++++|.-.|+.. .|.++...+.+.. .+-.+|+-..|.-+. +++..+..+--+++.
T Consensus 190 edl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~-~~pffDmAYQGfaSG------~~d~DA~avR~F~~~- 261 (427)
T KOG1411|consen 190 EDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKN-LLPFFDMAYQGFASG------DLDKDAQAVRLFVED- 261 (427)
T ss_pred HHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhcc-ccchhhhhhcccccC------CchhhHHHHHHHHHc-
Confidence 4555566788999998887764 8999998887653 455678887775332 334444555455542
Q ss_pred CCCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEec
Q 024469 75 PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 75 ~~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
..-+++..|+.-. ...|.|||.++-++|.
T Consensus 262 ---g~~~~laQSyAKN-----MGLYgERvGa~svvc~ 290 (427)
T KOG1411|consen 262 ---GHEILLAQSYAKN-----MGLYGERVGALSVVCK 290 (427)
T ss_pred ---CCceEeehhhhhh-----cchhhhccceeEEEec
Confidence 2336666666543 2346789999888774
No 262
>cd00739 DHPS DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.
Probab=65.49 E-value=23 Score=29.64 Aligned_cols=74 Identities=19% Similarity=0.146 Sum_probs=39.7
Q ss_pred cceEEEec--CCCCCh--------------hchHHHHHHHhcCCCe--EEEeCCCCCCCCCCCCCcccChHHhhHHHHHH
Q 024469 9 EKHFVLVH--GVNHGA--------------WCWYKLKARLVAGGHR--VTAVDLAASGINMKRIEDVHTFHAYSEPLMEV 70 (267)
Q Consensus 9 ~~~ivlvH--G~~~~~--------------~~w~~~~~~L~~~g~~--via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~ 70 (267)
+.++|++| |.+... ..+...++.+.+.|.. =|.+| ||+|.+.. .++.-.+.+-
T Consensus 120 ~~~vV~m~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Gi~~~~Ii~D-Pg~gf~ks--------~~~~~~~l~~ 190 (257)
T cd00739 120 GAPLVLMHMRGTPKTMQENPYYEDVVDEVLSFLEARLEAAESAGVARNRIILD-PGIGFGKT--------PEHNLELLRR 190 (257)
T ss_pred CCCEEEECCCCCCcccccCCCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEe-cCCCcccC--------HHHHHHHHHH
Confidence 56888888 443321 1244455556667764 56788 67775432 1222233333
Q ss_pred HHcCCCCCcEEEEeeChhhHH
Q 024469 71 LASLPAEEKVILVGHSLGGVT 91 (267)
Q Consensus 71 i~~l~~~~~vilvGHSmGG~i 91 (267)
++.+...+-++++|+|==..+
T Consensus 191 i~~l~~~~~pil~G~SrkSfi 211 (257)
T cd00739 191 LDELKQLGLPVLVGASRKSFI 211 (257)
T ss_pred HHHHHhCCCcEEEEecccHHH
Confidence 333322246789999755443
No 263
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=65.44 E-value=21 Score=28.20 Aligned_cols=62 Identities=10% Similarity=-0.001 Sum_probs=40.1
Q ss_pred ccceEEEecCCCCCh---hchHHHHHHHhcCCCeEEEeCCCCC---CCCCCCCCcccChHHhhHHHHHHHH
Q 024469 8 EEKHFVLVHGVNHGA---WCWYKLKARLVAGGHRVTAVDLAAS---GINMKRIEDVHTFHAYSEPLMEVLA 72 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~---~~w~~~~~~L~~~g~~via~Dl~G~---G~S~~~~~~~~~~~~~~~~l~~~i~ 72 (267)
.+.|+|++.-..... -.+++.+..|++.|+.|+-|. +|+ |..+.. ...++++.++.+.+.+.
T Consensus 112 ~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g--~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 112 ATTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYG--ALADIETILETIENTLK 179 (182)
T ss_pred CCCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCC--CCCCHHHHHHHHHHHhc
Confidence 367888888643222 245667888888898888776 665 654421 23477777777766553
No 264
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=64.34 E-value=7.8 Score=34.70 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=73.4
Q ss_pred CCccceEEEecCCCCChhch-HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCc--ccChHHhhHHHHHHHHcCCCC--CcE
Q 024469 6 GMEEKHFVLVHGVNHGAWCW-YKLKARLVAGGHRVTAVDLAASGINMKRIED--VHTFHAYSEPLMEVLASLPAE--EKV 80 (267)
Q Consensus 6 ~~~~~~ivlvHG~~~~~~~w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~--~~~~~~~~~~l~~~i~~l~~~--~~v 80 (267)
+...|+|+.--|-+.+..-+ .+....| + | +-+.+.+|=||.|...+.+ .-|+.+-|+|..++++++... ++=
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Ll-d-~-NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kW 136 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLL-D-G-NQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKW 136 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhh-c-c-ceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCc
Confidence 34457777777776544322 3555555 3 2 6788999999998643222 239999999999999888421 466
Q ss_pred EEEeeChhhHHHHHHhhhCCCccce-EEEEecc
Q 024469 81 ILVGHSLGGVTLALAADKFPHKISV-AVFVTAF 112 (267)
Q Consensus 81 ilvGHSmGG~i~~~~a~~~p~~v~~-lvli~~~ 112 (267)
|=-|=|=||+.++.+=.-+|+-|++ +.+++|.
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 6679999999888877778999986 6667763
No 265
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=63.00 E-value=15 Score=30.32 Aligned_cols=88 Identities=23% Similarity=0.136 Sum_probs=50.2
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCC----------CCCCCCCCCCccc-------ChHHhhHHHHHHHH
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA----------ASGINMKRIEDVH-------TFHAYSEPLMEVLA 72 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~----------G~G~S~~~~~~~~-------~~~~~~~~l~~~i~ 72 (267)
+.+++.||++.....-......|...++++++.+.. |++.+.....+.. ....+..+......
T Consensus 50 p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (299)
T COG1073 50 PAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGA 129 (299)
T ss_pred ceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHHhh
Confidence 679999999987776544566676777888877752 2222221110000 11111111111111
Q ss_pred cCCCCCcEEEEeeChhhHHHHHHhhhCC
Q 024469 73 SLPAEEKVILVGHSLGGVTLALAADKFP 100 (267)
Q Consensus 73 ~l~~~~~vilvGHSmGG~i~~~~a~~~p 100 (267)
-..+.+..|+++|+..+...+...+
T Consensus 130 ---~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 130 ---SLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred ---hcCcceEEEEEeeccchHHHhhcch
Confidence 1258899999999998777776665
No 266
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=62.40 E-value=94 Score=26.22 Aligned_cols=98 Identities=16% Similarity=0.165 Sum_probs=56.7
Q ss_pred cCCccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEE-E
Q 024469 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVIL-V 83 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vil-v 83 (267)
.|..+.||+|==|...+.+.|..-++.+...|-.=+.+-++|. .+ .+ .|+..+.--.....++.. -.-+|++ .
T Consensus 130 ~a~~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~-~t-~~---~Y~~~~vdl~~i~~lk~~-~~~pV~~D~ 203 (266)
T PRK13398 130 VGKTKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGI-RT-FE---TYTRNTLDLAAVAVIKEL-SHLPIIVDP 203 (266)
T ss_pred HhcCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCC-CC-CC---CCCHHHHHHHHHHHHHhc-cCCCEEEeC
Confidence 3555899999999999999999989888776654455566763 11 11 132222222223344433 2246777 6
Q ss_pred eeChhh----HHHHHHhhhCCCccceEEEEe
Q 024469 84 GHSLGG----VTLALAADKFPHKISVAVFVT 110 (267)
Q Consensus 84 GHSmGG----~i~~~~a~~~p~~v~~lvli~ 110 (267)
.||.|- .....+|.... ..++++..
T Consensus 204 sHs~G~~~~v~~~~~aAva~G--a~Gl~iE~ 232 (266)
T PRK13398 204 SHATGRRELVIPMAKAAIAAG--ADGLMIEV 232 (266)
T ss_pred CCcccchhhHHHHHHHHHHcC--CCEEEEec
Confidence 999983 22333333322 45666554
No 267
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=61.79 E-value=8.8 Score=35.15 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=40.5
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcCC-------CCeEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYP-------VNEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~p-------~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
+++.+...|=.|..+|...++...+..+ ...+.+++ +|||++.++|+.....+..++.
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCChHHHHHHHHHHHh
Confidence 4566667777788887776654333222 22346676 9999999999999988877663
No 268
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=60.45 E-value=10 Score=30.59 Aligned_cols=47 Identities=17% Similarity=0.036 Sum_probs=35.1
Q ss_pred CccEEEEEeCCCccCChHHHHHHH----HcCCCCeEEEecCCCCCCCCCCcHHH
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMI----QNYPVNEVMEIKGGDHMAMLSDPQKL 255 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~----~~~p~~~~~~i~~~gH~~~~e~p~~~ 255 (267)
.+|.+..+|+.|++||-...+... ......+++.+++.+|.. .|+++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~---~~~e~ 194 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHST---SPQEL 194 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccc---cHHHH
Confidence 578899999999999988766433 233346788999999876 45555
No 269
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=59.16 E-value=15 Score=33.86 Aligned_cols=39 Identities=31% Similarity=0.325 Sum_probs=27.0
Q ss_pred CCCcEEEEeeChhhHHHH-HH---hhh-CCCccceEEEEeccCC
Q 024469 76 AEEKVILVGHSLGGVTLA-LA---ADK-FPHKISVAVFVTAFMP 114 (267)
Q Consensus 76 ~~~~vilvGHSmGG~i~~-~~---a~~-~p~~v~~lvli~~~~~ 114 (267)
+.+||+|||.|+|+=++. +. +.+ --+.|..++++.+.++
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 457999999999997655 22 321 1245888999886444
No 270
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=59.12 E-value=13 Score=31.92 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=25.4
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCC
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p 100 (267)
+.+.++.. +....++.|-|||+.++..+|....
T Consensus 29 Vl~aL~e~-gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEA-GIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHc-CCCccEEEecCHHHHHHHHHHcCCC
Confidence 44556656 4578899999999999999887543
No 271
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=58.95 E-value=9.7 Score=31.83 Aligned_cols=22 Identities=41% Similarity=0.706 Sum_probs=15.9
Q ss_pred HHHHcCCCCCcEEEEeeChhhH
Q 024469 69 EVLASLPAEEKVILVGHSLGGV 90 (267)
Q Consensus 69 ~~i~~l~~~~~vilvGHSmGG~ 90 (267)
.+.+.+.....+++.|||+|..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchh
Confidence 3444444447899999999986
No 272
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=58.77 E-value=22 Score=27.69 Aligned_cols=41 Identities=12% Similarity=-0.110 Sum_probs=31.2
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCCC
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMA 247 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~ 247 (267)
+.|+++..|+.|..=..+.... ....+..+++.++++.|-+
T Consensus 142 ~tPtli~qGtrD~fGtr~~Va~-y~ls~~iev~wl~~adHDL 182 (213)
T COG3571 142 KTPTLITQGTRDEFGTRDEVAG-YALSDPIEVVWLEDADHDL 182 (213)
T ss_pred CCCeEEeecccccccCHHHHHh-hhcCCceEEEEeccCcccc
Confidence 6799999999999876654421 2234667899999999976
No 273
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=58.49 E-value=14 Score=31.80 Aligned_cols=34 Identities=21% Similarity=0.186 Sum_probs=25.2
Q ss_pred HHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhC
Q 024469 65 EPLMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (267)
Q Consensus 65 ~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~ 99 (267)
--+++.+++. +...-.++|-|+|+.++..+|..+
T Consensus 31 iGvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 31 IGVIKALEEA-GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 3345566666 456778899999999999888663
No 274
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=58.25 E-value=11 Score=33.30 Aligned_cols=58 Identities=9% Similarity=0.078 Sum_probs=45.7
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHcCCCCe-EEEecCCCCCCCCCCcHHHHHHHHHHHHhh
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNE-VMEIKGGDHMAMLSDPQKLCDCLSQISLKY 266 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~-~~~i~~~gH~~~~e~p~~~~~~l~~f~~~~ 266 (267)
.+|+-+|.+..|...+++.++..-+..|+.+ +..+||..|.. .++.+...|..|+..|
T Consensus 329 alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~---~n~~i~esl~~flnrf 387 (507)
T COG4287 329 ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNL---INQFIKESLEPFLNRF 387 (507)
T ss_pred cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchh---hHHHHHHHHHHHHHHH
Confidence 6899999999999988888888888899875 67889988865 4555666777777554
No 275
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=58.10 E-value=39 Score=25.85 Aligned_cols=62 Identities=23% Similarity=0.259 Sum_probs=42.0
Q ss_pred HHHHHhcCCC-eEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH-HHHHHhhhC
Q 024469 28 LKARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV-TLALAADKF 99 (267)
Q Consensus 28 ~~~~L~~~g~-~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~-i~~~~a~~~ 99 (267)
+...|+..|. +|+.++.+.. ..++.+.+++.|.+++++.+ -+++|+|+|--|. ++..+|.+.
T Consensus 50 l~~~l~~~G~d~v~~~~~~~~--------~~~~~~~~a~~l~~~~~~~~--~~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 50 LRKALAKYGADKVYHIDDPAL--------AEYDPEAYADALAELIKEEG--PDLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHHSTTESEEEEEE-GGG--------TTC-HHHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHHH
T ss_pred HhhhhhhcCCcEEEEecCccc--------cccCHHHHHHHHHHHHHhcC--CCEEEEcCcCCCCcHHHHHHHHh
Confidence 3445654565 7888886521 23566889999999999863 4799999987776 666666553
No 276
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=57.57 E-value=19 Score=26.73 Aligned_cols=33 Identities=36% Similarity=0.554 Sum_probs=22.1
Q ss_pred ceEEEecCC-CCCh------------hchH-----------HHHHHHhcCCCeEEEe
Q 024469 10 KHFVLVHGV-NHGA------------WCWY-----------KLKARLVAGGHRVTAV 42 (267)
Q Consensus 10 ~~ivlvHG~-~~~~------------~~w~-----------~~~~~L~~~g~~via~ 42 (267)
..++|+||- |++. ..|- ..+.+|++.|++|+.+
T Consensus 58 ~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 58 RCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred eEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 578999995 4432 2342 2456788889999865
No 277
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=57.40 E-value=16 Score=31.73 Aligned_cols=76 Identities=14% Similarity=0.090 Sum_probs=52.1
Q ss_pred eEEEeCCC-CCCCCCCCCCc--ccChHHhhHHHHHHHHcCC------CCCcEEEEeeChhhHHHHHHhhh------CC--
Q 024469 38 RVTAVDLA-ASGINMKRIED--VHTFHAYSEPLMEVLASLP------AEEKVILVGHSLGGVTLALAADK------FP-- 100 (267)
Q Consensus 38 ~via~Dl~-G~G~S~~~~~~--~~~~~~~~~~l~~~i~~l~------~~~~vilvGHSmGG~i~~~~a~~------~p-- 100 (267)
.++-+|-| |.|.|=-.... +.+..+.+.|+.++++.+- +..|.+++..|+||-.+..++.. +.
T Consensus 73 dllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i 152 (414)
T KOG1283|consen 73 DLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEI 152 (414)
T ss_pred cEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCce
Confidence 67888988 88876321112 2377888999999988661 23589999999999877665543 22
Q ss_pred -CccceEEEEeccC
Q 024469 101 -HKISVAVFVTAFM 113 (267)
Q Consensus 101 -~~v~~lvli~~~~ 113 (267)
..+.+++|=+++.
T Consensus 153 ~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 153 KLNFIGVALGDSWI 166 (414)
T ss_pred eecceeEEccCccc
Confidence 2366777766653
No 278
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=55.56 E-value=44 Score=27.97 Aligned_cols=69 Identities=25% Similarity=0.246 Sum_probs=37.3
Q ss_pred cceEEEec--CCCCCh--------------hchHHHHHHHhcCCCe--EEEeCCCCCCCCCCCCCcccChHHhhHHHHHH
Q 024469 9 EKHFVLVH--GVNHGA--------------WCWYKLKARLVAGGHR--VTAVDLAASGINMKRIEDVHTFHAYSEPLMEV 70 (267)
Q Consensus 9 ~~~ivlvH--G~~~~~--------------~~w~~~~~~L~~~g~~--via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~ 70 (267)
+.++|++| |.+.+. ..+...+..+.+.|.. =+.+| ||.|..... +..-.+.+-
T Consensus 118 ~~~vV~m~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Gi~~~~iilD-Pg~gf~ks~--------~~~~~~l~~ 188 (257)
T TIGR01496 118 GVPLVLMHMRGTPRTMQENPHYEDVVEEVLRFLEARAEELVAAGVAAERIILD-PGIGFGKTP--------EHNLELLKH 188 (257)
T ss_pred CCcEEEEeCCCCCcccccCCCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEE-CCCCcccCH--------HHHHHHHHH
Confidence 56888888 443331 1244555556667763 36778 688754311 222233333
Q ss_pred HHcCCCCCcEEEEeeC
Q 024469 71 LASLPAEEKVILVGHS 86 (267)
Q Consensus 71 i~~l~~~~~vilvGHS 86 (267)
++.+....-++++|+|
T Consensus 189 i~~l~~~~~p~l~G~S 204 (257)
T TIGR01496 189 LEEFVALGYPLLVGAS 204 (257)
T ss_pred HHHHHhCCCcEEEEec
Confidence 3333222367899996
No 279
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=54.87 E-value=19 Score=27.89 Aligned_cols=33 Identities=24% Similarity=0.227 Sum_probs=24.0
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCC
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p 100 (267)
+.+.+++. +...-+++|-|.|+.++..+|...+
T Consensus 16 vl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 44445445 4457899999999999998886543
No 280
>PRK10279 hypothetical protein; Provisional
Probab=54.45 E-value=17 Score=31.22 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=24.6
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCC
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p 100 (267)
+.+.+++. +...-.++|-|+|+.++..+|....
T Consensus 23 VL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKV-GIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 34555555 4567899999999999998886544
No 281
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=54.08 E-value=1.1e+02 Score=26.10 Aligned_cols=83 Identities=19% Similarity=0.158 Sum_probs=44.2
Q ss_pred HHHHhcCCCeEEE------eCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH-H---HHHHh--
Q 024469 29 KARLVAGGHRVTA------VDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV-T---LALAA-- 96 (267)
Q Consensus 29 ~~~L~~~g~~via------~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~-i---~~~~a-- 96 (267)
.+.|+..|++|-+ ..++|||...........+.++.+++.+ ++.+ ..-+.++-|. +|.. - +..+.
T Consensus 21 ~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~e~l~~~l~~l~~-~~~~-~~~davltGY-lgs~~qv~~i~~~v~~ 97 (281)
T COG2240 21 IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMPPEQLADLLNGLEA-IDKL-GECDAVLTGY-LGSAEQVRAIAGIVKA 97 (281)
T ss_pred HHHHHHcCCceeeeceEEecCCCCCCCCCCcCCCHHHHHHHHHHHHh-cccc-cccCEEEEcc-CCCHHHHHHHHHHHHH
Confidence 3456666776654 4899999865433222244444444433 1122 2247888887 3332 1 11111
Q ss_pred --hhCCCccceEEEEeccCCCCC
Q 024469 97 --DKFPHKISVAVFVTAFMPDTT 117 (267)
Q Consensus 97 --~~~p~~v~~lvli~~~~~~~~ 117 (267)
+.+|+ .++++||++.+.+
T Consensus 98 vk~~~P~---~~~l~DPVMGD~g 117 (281)
T COG2240 98 VKEANPN---ALYLCDPVMGDPG 117 (281)
T ss_pred HhccCCC---eEEEeCCcccCCC
Confidence 12444 6788999876655
No 282
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=53.80 E-value=15 Score=34.44 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=23.5
Q ss_pred HHHHH-HcCCCCCcEEEEeeChhhHHHHHHhhhC
Q 024469 67 LMEVL-ASLPAEEKVILVGHSLGGVTLALAADKF 99 (267)
Q Consensus 67 l~~~i-~~l~~~~~vilvGHSmGG~i~~~~a~~~ 99 (267)
+.+++ +.. +.++-.++|||||=..++.+|.-.
T Consensus 254 La~ll~~~~-GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEF-AIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhc-CCCCCEEeecCHHHHHHHHHhCCC
Confidence 34555 355 568899999999999888777543
No 283
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=53.75 E-value=50 Score=26.36 Aligned_cols=50 Identities=18% Similarity=0.138 Sum_probs=35.2
Q ss_pred CccEEEEEeCCCc--cCChHHHHHHHHcCCCCeEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 206 SVKRVYLVCEEDI--GLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 206 ~iP~l~i~g~~D~--~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
..|++-|+|.++. .+|. -..++.+++.+| .||.. .++.+++++.|.+-++
T Consensus 139 ~~~v~CiyG~~E~d~~cp~-------l~~~~~~~i~lp-GgHHf-d~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 139 PAPVQCIYGEDEDDSLCPS-------LRQPGVEVIALP-GGHHF-DGDYDALAKRILDALK 190 (192)
T ss_pred CCeEEEEEcCCCCCCcCcc-------ccCCCcEEEEcC-CCcCC-CCCHHHHHHHHHHHHh
Confidence 4578889998854 4442 123677889999 68876 5667888888876554
No 284
>PHA02114 hypothetical protein
Probab=52.99 E-value=20 Score=25.08 Aligned_cols=33 Identities=27% Similarity=0.307 Sum_probs=25.6
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEe
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAV 42 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~ 42 (267)
.+|||=-.+..+..-|-.+..+|.+.||+|+|-
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvat 115 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVAT 115 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeeh
Confidence 356666666667777989999998889999874
No 285
>COG3933 Transcriptional antiterminator [Transcription]
Probab=52.39 E-value=83 Score=28.62 Aligned_cols=71 Identities=21% Similarity=0.243 Sum_probs=52.7
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhh
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG 89 (267)
+.||+-||-. ++.+.-.++..|-..+ -++|+|+| .+ .+..+..+.+.+-+++. ...+=+++=-+||.
T Consensus 110 ~vIiiAHG~s-TASSmaevanrLL~~~-~~~aiDMP--------Ld--vsp~~vle~l~e~~k~~-~~~~GlllLVDMGS 176 (470)
T COG3933 110 KVIIIAHGYS-TASSMAEVANRLLGEE-IFIAIDMP--------LD--VSPSDVLEKLKEYLKER-DYRSGLLLLVDMGS 176 (470)
T ss_pred eEEEEecCcc-hHHHHHHHHHHHhhcc-ceeeecCC--------Cc--CCHHHHHHHHHHHHHhc-CccCceEEEEecch
Confidence 5789999987 5556777788876554 58899998 32 47788889999999988 43454566679999
Q ss_pred HHHH
Q 024469 90 VTLA 93 (267)
Q Consensus 90 ~i~~ 93 (267)
....
T Consensus 177 L~~f 180 (470)
T COG3933 177 LTSF 180 (470)
T ss_pred HHHH
Confidence 8533
No 286
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=52.38 E-value=21 Score=30.14 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=23.7
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhhh
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~ 98 (267)
+++.+++. +...-.++|-|+|+.++..+|..
T Consensus 28 VL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEA-GIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHc-CCCccEEEEECHHHHHHHHHHcC
Confidence 44555656 44667889999999999998865
No 287
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=52.00 E-value=23 Score=28.97 Aligned_cols=36 Identities=22% Similarity=0.300 Sum_probs=28.5
Q ss_pred ccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCC
Q 024469 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL 44 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl 44 (267)
+.++.|||-|-..++-.+ .++..|...||+|+|--.
T Consensus 5 ~~~k~VlItgcs~GGIG~-ala~ef~~~G~~V~AtaR 40 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGY-ALAKEFARNGYLVYATAR 40 (289)
T ss_pred cCCCeEEEeecCCcchhH-HHHHHHHhCCeEEEEEcc
Confidence 468899999877666655 578889899999998743
No 288
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=51.83 E-value=1e+02 Score=25.82 Aligned_cols=44 Identities=9% Similarity=0.011 Sum_probs=34.8
Q ss_pred ccCCccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCC
Q 024469 4 VVGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS 47 (267)
Q Consensus 4 ~~~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~ 47 (267)
..|..++||++=-|.+.+.+.|...++.+.+.|-.=+++-.||.
T Consensus 117 ~va~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 117 TLSHIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred HHHccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 34566899999999999999999999999877764455555664
No 289
>COG0218 Predicted GTPase [General function prediction only]
Probab=51.39 E-value=19 Score=28.93 Aligned_cols=15 Identities=27% Similarity=0.290 Sum_probs=11.9
Q ss_pred EEEeCCCCCCCCCCC
Q 024469 39 VTAVDLAASGINMKR 53 (267)
Q Consensus 39 via~Dl~G~G~S~~~ 53 (267)
....||||+|...-+
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 678899999986543
No 290
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=50.69 E-value=32 Score=31.67 Aligned_cols=59 Identities=15% Similarity=0.009 Sum_probs=40.8
Q ss_pred ccEEEEEeCCCccCChHHHHH----HHHcCCC--------CeEEEecCCCCCCCCC--CcHHHHHHHHHHHHh
Q 024469 207 VKRVYLVCEEDIGLPKQFQHW----MIQNYPV--------NEVMEIKGGDHMAMLS--DPQKLCDCLSQISLK 265 (267)
Q Consensus 207 iP~l~i~g~~D~~~~~~~~~~----~~~~~p~--------~~~~~i~~~gH~~~~e--~p~~~~~~l~~f~~~ 265 (267)
-..++-+|-.|.++|+..... +.+..++ .|++.+||.+||.--. .+-....+|.+++++
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 345667899999998876543 3344432 2578999999998765 344556777788764
No 291
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=49.72 E-value=43 Score=26.49 Aligned_cols=13 Identities=15% Similarity=0.258 Sum_probs=10.9
Q ss_pred eEEEeCCCCCCCCC
Q 024469 38 RVTAVDLAASGINM 51 (267)
Q Consensus 38 ~via~Dl~G~G~S~ 51 (267)
++|++| ||||.++
T Consensus 1 k~I~iD-pGHGg~d 13 (189)
T TIGR02883 1 KIIVID-PGHGGID 13 (189)
T ss_pred CEEEEe-CCCCCCC
Confidence 478999 9999876
No 292
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=49.28 E-value=98 Score=22.29 Aligned_cols=74 Identities=23% Similarity=0.228 Sum_probs=50.7
Q ss_pred eEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~ 90 (267)
-|+.-||-.+. ....-++.+....-+|.++++. . ..+.+++.+.+.++++.+...+.+++.--=+||.
T Consensus 4 ili~sHG~~A~--gl~~s~~~i~G~~~~i~~i~~~--------~--~~~~~~~~~~l~~~i~~~~~~~~vivltDl~GGS 71 (116)
T TIGR00824 4 IIISGHGQAAI--ALLKSAEMIFGEQNNVGAVPFV--------P--GENAETLQEKYNAALADLDTEEEVLFLVDIFGGS 71 (116)
T ss_pred EEEEecHHHHH--HHHHHHHHHcCCcCCeEEEEcC--------C--CcCHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 57778888533 3445555554333468888875 2 2367889999999999885556788888888997
Q ss_pred HHHHHh
Q 024469 91 TLALAA 96 (267)
Q Consensus 91 i~~~~a 96 (267)
+...++
T Consensus 72 p~n~a~ 77 (116)
T TIGR00824 72 PYNAAA 77 (116)
T ss_pred HHHHHH
Confidence 654443
No 293
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=48.93 E-value=72 Score=27.30 Aligned_cols=67 Identities=12% Similarity=0.155 Sum_probs=40.3
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCC---------------CCCCCCCCCccc-ChHHhhHHHHHHHHc
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAA---------------SGINMKRIEDVH-TFHAYSEPLMEVLAS 73 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G---------------~G~S~~~~~~~~-~~~~~~~~l~~~i~~ 73 (267)
|-|+|.-|.| ...+.|+..||.||.+|+.- .|+-| +...| +.+...+.+.+.++.
T Consensus 253 Pmi~fakG~g-------~~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlD--P~~ly~s~e~it~~v~~mv~~ 323 (359)
T KOG2872|consen 253 PMILFAKGSG-------GALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLD--PGVLYGSKEEITQLVKQMVKD 323 (359)
T ss_pred ceEEEEcCcc-------hHHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCC--hHHhcCCHHHHHHHHHHHHHH
Confidence 5577777765 35678888999999999853 11111 11122 556666777777777
Q ss_pred CCCCCcEEEEee
Q 024469 74 LPAEEKVILVGH 85 (267)
Q Consensus 74 l~~~~~vilvGH 85 (267)
.+..+-+.=.||
T Consensus 324 fG~~ryI~NLGH 335 (359)
T KOG2872|consen 324 FGKSRYIANLGH 335 (359)
T ss_pred hCccceEEecCC
Confidence 743222333455
No 294
>PF09087 Cyc-maltodext_N: Cyclomaltodextrinase, N-terminal; InterPro: IPR015171 This domain is found at the N terminus of cyclomaltodextrinase. The domain assumes a beta-sandwich structure composed of the eight antiparallel beta-strands. A ten residue linker is also present at the C-terminal end, which connects the N-terminal domain to a distal domain in the protein. This domain participates in oligomerisation of the protein, wherein the N-terminal domain of one subunit contacts the active centre of the other subunit, and is also required for binding of cyclodextrin to substrate []. ; PDB: 3EDK_B 3EDD_A 3EDJ_B 3EDE_A 1H3G_B 3EDF_B.
Probab=48.23 E-value=12 Score=25.78 Aligned_cols=16 Identities=38% Similarity=0.627 Sum_probs=10.1
Q ss_pred ccCCccceE-EEecCCC
Q 024469 4 VVGMEEKHF-VLVHGVN 19 (267)
Q Consensus 4 ~~~~~~~~i-vlvHG~~ 19 (267)
|+||..+.+ |||||=.
T Consensus 8 W~GMk~~~LQLmvyG~n 24 (88)
T PF09087_consen 8 WVGMKNPELQLMVYGKN 24 (88)
T ss_dssp ETT-SS-EEEEEEESTT
T ss_pred hcCCCCCcEEEEEecCC
Confidence 678877766 8888754
No 295
>PF12083 DUF3560: Domain of unknown function (DUF3560); InterPro: IPR021944 This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 120 amino acids in length. This domain has a conserved GHHSE sequence motif.
Probab=47.71 E-value=16 Score=26.96 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=14.3
Q ss_pred hHHHHHHHHcCCCCCcEEEEeeC
Q 024469 64 SEPLMEVLASLPAEEKVILVGHS 86 (267)
Q Consensus 64 ~~~l~~~i~~l~~~~~vilvGHS 86 (267)
.+...+..+.+ ..+.+|||||.
T Consensus 29 ~~~a~~~~~~i-p~GQPIlVGHH 50 (126)
T PF12083_consen 29 YEAANRMAEAI-PFGQPILVGHH 50 (126)
T ss_pred HHHHHHHHhcc-CCCCCeecccc
Confidence 34445556666 44788999974
No 296
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=47.30 E-value=29 Score=27.24 Aligned_cols=33 Identities=27% Similarity=0.271 Sum_probs=23.4
Q ss_pred HHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhC
Q 024469 66 PLMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (267)
Q Consensus 66 ~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~ 99 (267)
-+.+.+++. +...-+++|=|.|++++..+|..+
T Consensus 16 Gvl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEA-GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHc-CCCcceEEEECHHHHHHHHHHcCC
Confidence 344445545 345679999999999998888643
No 297
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=47.30 E-value=1.2e+02 Score=26.44 Aligned_cols=57 Identities=19% Similarity=0.147 Sum_probs=36.7
Q ss_pred HHHHHhcCCCeEEEeCCCCCCCCCCC-C---CcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 28 LKARLVAGGHRVTAVDLAASGINMKR-I---EDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 28 ~~~~L~~~g~~via~Dl~G~G~S~~~-~---~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
++..|.++||++..+. ||+|.+.+. . ....+-.+..|+-..+-+.+ . -.++||-+-=
T Consensus 57 L~~~L~~~G~~~~IlS-RGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~-~--~~V~V~~dR~ 117 (326)
T PF02606_consen 57 LARLLQARGYRPAILS-RGYGRKSKGEPILVSDGSDAEEVGDEPLLLARKL-P--VPVIVGPDRV 117 (326)
T ss_pred HHHHHHhcCCceEEEc-CCCCCCCCCCeEEEeCCCChhhhcCHHHHHHHhc-C--CcEEEeCcHH
Confidence 8888999999988887 799975432 1 12235566666665555544 2 3466776643
No 298
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.75 E-value=37 Score=27.66 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=22.9
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhC
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~ 99 (267)
+.+.+++. +.+.-.++|=|.|+.++..+|...
T Consensus 18 vL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 18 FLAALLEM-GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHc-CCCceEEEEeCHHHHHHHHHHcCC
Confidence 33444444 346678999999999998888654
No 299
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=44.73 E-value=16 Score=33.09 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=26.1
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCCccc
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKIS 104 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~~v~ 104 (267)
+.+.+... +..+-+++|-|.|+.+++.++.+.++.+.
T Consensus 91 VLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~eel~ 127 (421)
T cd07230 91 VLKALFEA-NLLPRIISGSSAGSIVAAILCTHTDEEIP 127 (421)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 33444334 34567899999999999998876666543
No 300
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=44.56 E-value=1.1e+02 Score=28.21 Aligned_cols=61 Identities=13% Similarity=0.124 Sum_probs=39.7
Q ss_pred cceEEEecCCCCChh---chHHHHHHHhcCCCeEEEeCCCC----CCCCCCCCCcccChHHhhHHHHHHHH
Q 024469 9 EKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLAA----SGINMKRIEDVHTFHAYSEPLMEVLA 72 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~---~w~~~~~~L~~~g~~via~Dl~G----~G~S~~~~~~~~~~~~~~~~l~~~i~ 72 (267)
+.|+|++.-.....| ..+..+..|.+.|+.|+-|+- | +|..+. +.....++.++.+..++.
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~-g~lA~~g~~G~--Grm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNA-GEMAERGEAGV--GRMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCC-CccccCCCcCC--CCCCCHHHHHHHHHHHHh
Confidence 578999987755433 345667788888999987653 3 455442 233466677777776663
No 301
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=44.47 E-value=1.5e+02 Score=24.83 Aligned_cols=76 Identities=18% Similarity=0.272 Sum_probs=46.2
Q ss_pred cCCccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCC-CC-CcccChHHhhHHHHHHHHcCCCCCcEEE
Q 024469 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMK-RI-EDVHTFHAYSEPLMEVLASLPAEEKVIL 82 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~-~~-~~~~~~~~~~~~l~~~i~~l~~~~~vil 82 (267)
.|..++||++=-|...+.+.|..-++.+.+.|-.=+++-.+| .|.. +. ....++.. + ..++.. -.-+|++
T Consensus 128 ~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG--~s~y~~~~~~~~dl~~----i-~~lk~~-~~~pV~~ 199 (260)
T TIGR01361 128 VGKQGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCERG--IRTFEKATRNTLDLSA----V-PVLKKE-THLPIIV 199 (260)
T ss_pred HhcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEECC--CCCCCCCCcCCcCHHH----H-HHHHHh-hCCCEEE
Confidence 455689999999999999999999999987665333443443 2321 11 11122221 1 223322 1247888
Q ss_pred -EeeChh
Q 024469 83 -VGHSLG 88 (267)
Q Consensus 83 -vGHSmG 88 (267)
..||.|
T Consensus 200 ds~Hs~G 206 (260)
T TIGR01361 200 DPSHAAG 206 (260)
T ss_pred cCCCCCC
Confidence 799988
No 302
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.02 E-value=34 Score=27.67 Aligned_cols=33 Identities=33% Similarity=0.432 Sum_probs=24.3
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCC
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p 100 (267)
+.+.++.. +...-+++|-|.|++++..+|...+
T Consensus 16 vl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 44445555 3456789999999999999887664
No 303
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=43.99 E-value=41 Score=31.69 Aligned_cols=100 Identities=19% Similarity=0.222 Sum_probs=55.3
Q ss_pred CccceEEEecCCCCChhchHHHHHH--------HhcCCCeEEEeCCCC----CC-CCCCCCCccc-ChHHhhHHHHHHHH
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKAR--------LVAGGHRVTAVDLAA----SG-INMKRIEDVH-TFHAYSEPLMEVLA 72 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~--------L~~~g~~via~Dl~G----~G-~S~~~~~~~~-~~~~~~~~l~~~i~ 72 (267)
..+-|+-|-=|++.+......+.+. |...|-+|+.-.--| +| +|......+. ........|.+++.
T Consensus 256 ~~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~ 335 (655)
T COG3887 256 QKNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIK 335 (655)
T ss_pred ccCcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHh
Confidence 3356888888888777665554331 222244554332222 44 4443222221 22333444555554
Q ss_pred cCCCCCcEEEEee------ChhhHHHHHH-hhhCCCccceEEEEec
Q 024469 73 SLPAEEKVILVGH------SLGGVTLALA-ADKFPHKISVAVFVTA 111 (267)
Q Consensus 73 ~l~~~~~vilvGH------SmGG~i~~~~-a~~~p~~v~~lvli~~ 111 (267)
. .++|+++|| ++|++++... |.... + .+-++++|
T Consensus 336 e---~d~VfImGHk~pDmDalGsAig~~~~A~~~~-~-~a~~v~dp 376 (655)
T COG3887 336 E---SDNVFIMGHKFPDMDALGSAIGMQKFASMNN-K-EAFAVLDP 376 (655)
T ss_pred h---cCcEEEEccCCCChHHHHHHHHHHHHHHhcc-c-ccEEEECc
Confidence 3 479999999 7899987765 55443 3 56667775
No 304
>PRK13753 dihydropteroate synthase; Provisional
Probab=42.74 E-value=45 Score=28.34 Aligned_cols=53 Identities=17% Similarity=0.110 Sum_probs=29.2
Q ss_pred hcCCC--eEEEeCCCCCCCCC-CCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHH
Q 024469 33 VAGGH--RVTAVDLAASGINM-KRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTL 92 (267)
Q Consensus 33 ~~~g~--~via~Dl~G~G~S~-~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~ 92 (267)
.+.|. .=|.+| ||+|... +... .++ .....+..+...+ .-++|+|+|==.++.
T Consensus 161 ~~~Gi~~~~IilD-PGiGF~k~k~~~--~n~-~ll~~l~~l~~~~---g~PvLvg~SRKsfig 216 (279)
T PRK13753 161 RRSGVAADRLILD-PGMGFFLSPAPE--TSL-HVLSNLQKLKSAL---GLPLLVSVSRKSFLG 216 (279)
T ss_pred HHcCCChhhEEEe-CCCCCCCCCChH--HHH-HHHHhHHHHHHhC---CCceEEEccHhHHHH
Confidence 34554 348899 9999731 1211 122 2233333332223 468999999877764
No 305
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=42.29 E-value=28 Score=28.33 Aligned_cols=30 Identities=40% Similarity=0.423 Sum_probs=23.0
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCC
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL 44 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl 44 (267)
+.=|||.|-|.+-. +..|+++||+|+++|+
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 34588888887754 4467788999999998
No 306
>PF08255 Leader_Trp: Trp-operon Leader Peptide; InterPro: IPR013205 The tryptophan operon regulatory region of Citrobacter freundii (leader transcript) encodes a 14-residue peptide containing characteristic tandem tryptophan residues. It is about 10 nucleotides shorter than those of Escherichia coli and Salmonella typhimurium [].
Probab=41.89 E-value=12 Score=16.19 Aligned_cols=12 Identities=25% Similarity=0.166 Sum_probs=8.6
Q ss_pred ceEEEecCCCCC
Q 024469 10 KHFVLVHGVNHG 21 (267)
Q Consensus 10 ~~ivlvHG~~~~ 21 (267)
..++-+||||..
T Consensus 2 ~a~~~L~~WWrt 13 (14)
T PF08255_consen 2 KATFSLHGWWRT 13 (14)
T ss_pred ceEEEEeeEEEc
Confidence 356778998754
No 307
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=41.88 E-value=21 Score=28.02 Aligned_cols=13 Identities=38% Similarity=0.488 Sum_probs=10.5
Q ss_pred CcEEEEeeChhhH
Q 024469 78 EKVILVGHSLGGV 90 (267)
Q Consensus 78 ~~vilvGHSmGG~ 90 (267)
+..||||||+--=
T Consensus 101 ~~tILVGHsL~nD 113 (174)
T cd06143 101 LGCIFVGHGLAKD 113 (174)
T ss_pred CCCEEEeccchhH
Confidence 4679999999773
No 308
>cd00423 Pterin_binding Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS. Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH.
Probab=41.43 E-value=94 Score=25.93 Aligned_cols=69 Identities=16% Similarity=0.083 Sum_probs=36.1
Q ss_pred cceEEEecCCCCC----------------hhchHHHHHHHhcCCC--eEEEeCCCCCCCCCCCCCcccChHHhhHHHHHH
Q 024469 9 EKHFVLVHGVNHG----------------AWCWYKLKARLVAGGH--RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEV 70 (267)
Q Consensus 9 ~~~ivlvHG~~~~----------------~~~w~~~~~~L~~~g~--~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~ 70 (267)
+.++|++|--..+ -......+..+.+.|. .=|.+| ||.|... .. ...-.+.+.
T Consensus 120 ~~~vV~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Gi~~~~IilD-Pg~g~~k-~~-------~~~~~~l~~ 190 (258)
T cd00423 120 GAPVVLMHMDGTPQTMQNNPYYADVVDEVVEFLEERVEAATEAGIPPEDIILD-PGIGFGK-TE-------EHNLELLRR 190 (258)
T ss_pred CCCEEEECcCCCCcccccCCCcchHHHHHHHHHHHHHHHHHHcCCCHHHEEEe-CCCCccC-CH-------HHHHHHHHH
Confidence 5688888833211 1234455555666774 347888 8888543 11 111122233
Q ss_pred HHcCCCC-CcEEEEeeC
Q 024469 71 LASLPAE-EKVILVGHS 86 (267)
Q Consensus 71 i~~l~~~-~~vilvGHS 86 (267)
++.+... +-++++|+|
T Consensus 191 i~~~~~~~g~Pil~G~S 207 (258)
T cd00423 191 LDAFRELPGLPLLLGVS 207 (258)
T ss_pred HHHHHhcCCCcEEEEec
Confidence 3333222 457899986
No 309
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=41.42 E-value=30 Score=28.46 Aligned_cols=29 Identities=14% Similarity=0.166 Sum_probs=21.5
Q ss_pred eEEEecCCCCChhchHHHHHHHhcCCCeEEEeCC
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL 44 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl 44 (267)
.=||+.|-|.+-. +..|+++||+|+++|+
T Consensus 45 ~rvLvPgCGkg~D-----~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 45 SVCLIPMCGCSID-----MLFFLSKGVKVIGIEL 73 (226)
T ss_pred CeEEEeCCCChHH-----HHHHHhCCCcEEEEec
Confidence 3567777776554 3457788999999998
No 310
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=41.22 E-value=23 Score=28.29 Aligned_cols=24 Identities=4% Similarity=-0.151 Sum_probs=19.6
Q ss_pred cEEEEEeCCCccCChHHHHHHHHc
Q 024469 208 KRVYLVCEEDIGLPKQFQHWMIQN 231 (267)
Q Consensus 208 P~l~i~g~~D~~~~~~~~~~~~~~ 231 (267)
|.++++|.+|.++|++.++.+.+.
T Consensus 170 ~~~i~hG~~D~vVp~~~~~~~~~~ 193 (212)
T TIGR01840 170 IMSVVHGDADYTVLPGNADEIRDA 193 (212)
T ss_pred eEEEEEcCCCceeCcchHHHHHHH
Confidence 456889999999999988876654
No 311
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.27 E-value=1.6e+02 Score=26.08 Aligned_cols=60 Identities=20% Similarity=0.197 Sum_probs=46.8
Q ss_pred CccEEEEEeCCCccCChHHHHHHHHc--CC--CCeEEEecCCCCCCCC-CCcHHHHHHHHHHHHh
Q 024469 206 SVKRVYLVCEEDIGLPKQFQHWMIQN--YP--VNEVMEIKGGDHMAML-SDPQKLCDCLSQISLK 265 (267)
Q Consensus 206 ~iP~l~i~g~~D~~~~~~~~~~~~~~--~p--~~~~~~i~~~gH~~~~-e~p~~~~~~l~~f~~~ 265 (267)
..+.+++.+..|.++|.+..+.+++. .. ..+.+-+.++-|..+. ..|...-++...|++.
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRS 289 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHh
Confidence 45788999999999999988877543 22 3344667789999887 7789998999898875
No 312
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=40.02 E-value=17 Score=32.10 Aligned_cols=51 Identities=14% Similarity=-0.024 Sum_probs=40.1
Q ss_pred CCccEEEEEeCCCccCChH-HHHHHHHcCCCC--eEEEecCCCCCCCCCCcHHH
Q 024469 205 GSVKRVYLVCEEDIGLPKQ-FQHWMIQNYPVN--EVMEIKGGDHMAMLSDPQKL 255 (267)
Q Consensus 205 ~~iP~l~i~g~~D~~~~~~-~~~~~~~~~p~~--~~~~i~~~gH~~~~e~p~~~ 255 (267)
..+|++++-|..|.+.|+. .+......+|+. -+.+++++.|.-++|...++
T Consensus 250 v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 250 VTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred eecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 3579999999999977665 334555667766 46788999999999988885
No 313
>PRK06193 hypothetical protein; Provisional
Probab=39.60 E-value=43 Score=27.11 Aligned_cols=51 Identities=22% Similarity=0.288 Sum_probs=31.7
Q ss_pred cChHHhhHHHHHHHHcCC-CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEec
Q 024469 58 HTFHAYSEPLMEVLASLP-AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 58 ~~~~~~~~~l~~~i~~l~-~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
.+.+.|.+++.++|+.+. ..++++||||.. ....++...++.-...|++.+
T Consensus 135 ~~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp---~i~~l~g~~~~~~g~~~~~~~ 186 (206)
T PRK06193 135 ERNALLKAGLRPLLTTPPDPGTNTVLVGHDD---NLEAATGIYPEPEGEAAVFEP 186 (206)
T ss_pred hhHHHHHHHHHHHHhhCCCCCCeEEEEeCch---HHHHHhCCCCccCccEEEEEe
Confidence 355677899999999884 345799999994 233344334442333455543
No 314
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=39.49 E-value=1.5e+02 Score=22.74 Aligned_cols=77 Identities=23% Similarity=0.192 Sum_probs=47.8
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCC-eEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~-~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
++..+++-|-.... ....+...|. +|+.++.+. . ..|+.+.+++.|.+++++.+ -.++|+|||-
T Consensus 29 ~~v~~v~~G~~~~~-----~~~~~~~~Gad~v~~~~~~~-------~-~~~~~~~~a~al~~~i~~~~--p~~Vl~~~t~ 93 (168)
T cd01715 29 GEVTALVIGSGAEA-----VAAALKAYGADKVLVAEDPA-------L-AHYLAEPYAPALVALAKKEK--PSHILAGATS 93 (168)
T ss_pred CCEEEEEECCChHH-----HHHHHHhcCCCEEEEecChh-------h-cccChHHHHHHHHHHHHhcC--CCEEEECCCc
Confidence 34566666654222 1333434454 777776542 1 23567899999999998763 5899999886
Q ss_pred hhH-HHHHHhhhCC
Q 024469 88 GGV-TLALAADKFP 100 (267)
Q Consensus 88 GG~-i~~~~a~~~p 100 (267)
=|- ++.++|.+..
T Consensus 94 ~g~~la~rlAa~L~ 107 (168)
T cd01715 94 FGKDLAPRVAAKLD 107 (168)
T ss_pred cccchHHHHHHHhC
Confidence 554 6777766543
No 315
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=39.30 E-value=53 Score=25.25 Aligned_cols=49 Identities=18% Similarity=0.310 Sum_probs=36.7
Q ss_pred CCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHH
Q 024469 36 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVT 91 (267)
Q Consensus 36 g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i 91 (267)
.=|++++|+-|- .....++.+-+.|.+++......+.|+|-=-|=||++
T Consensus 97 ~~r~~VldF~Gd-------i~A~~v~~LReeisail~~a~~~DeV~~rLES~GG~V 145 (155)
T PF08496_consen 97 KPRLFVLDFKGD-------IKASEVESLREEISAILSVATPEDEVLVRLESPGGMV 145 (155)
T ss_pred CCeEEEEecCCC-------ccHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCcee
Confidence 358999999751 1223567777888888887656678999999999985
No 316
>PF14987 NADHdh_A3: NADH dehydrogenase 1 alpha subcomplex subunit 3
Probab=39.12 E-value=33 Score=22.95 Aligned_cols=28 Identities=29% Similarity=0.415 Sum_probs=21.9
Q ss_pred hHHHHHHHHcCCCCCcEEEEeeChhhHH
Q 024469 64 SEPLMEVLASLPAEEKVILVGHSLGGVT 91 (267)
Q Consensus 64 ~~~l~~~i~~l~~~~~vilvGHSmGG~i 91 (267)
+..+.+|++.....++|.+|....||+.
T Consensus 2 A~r~~afLKnAWaKEPVlvvSf~ig~la 29 (84)
T PF14987_consen 2 AARLGAFLKNAWAKEPVLVVSFVIGGLA 29 (84)
T ss_pred chHHHHHHHHhhhcCCeEEeeehhhhhh
Confidence 4557778887655579999999999984
No 317
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=39.12 E-value=54 Score=26.72 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=24.4
Q ss_pred cceEEEecCCCCChhc-hHHHHHHHhcCCC-eEEEeCC
Q 024469 9 EKHFVLVHGVNHGAWC-WYKLKARLVAGGH-RVTAVDL 44 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~-w~~~~~~L~~~g~-~via~Dl 44 (267)
+..|++.||..+++.. |..+--.|.+.|| .|+....
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~v 175 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAV 175 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 4578999999988875 4445455566777 5555444
No 318
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=38.88 E-value=83 Score=28.26 Aligned_cols=55 Identities=16% Similarity=-0.027 Sum_probs=35.7
Q ss_pred EEEEeCCCccCChHHHHHHHHcC----CCCeEEEe-----------cCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 210 VYLVCEEDIGLPKQFQHWMIQNY----PVNEVMEI-----------KGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 210 l~i~g~~D~~~~~~~~~~~~~~~----p~~~~~~i-----------~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
...++..|...|.+.-+.+.+.+ =+++++.| .+..|-+=+..-.-|...+-..++
T Consensus 297 vsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~le 366 (403)
T PF11144_consen 297 VSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLE 366 (403)
T ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHH
Confidence 44589999999998777665432 25566555 566787767666666655544443
No 319
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=38.65 E-value=46 Score=25.80 Aligned_cols=31 Identities=29% Similarity=0.259 Sum_probs=22.5
Q ss_pred HHHHcCCCCCcEEEEeeChhhHHHHHHhhhCC
Q 024469 69 EVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (267)
Q Consensus 69 ~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p 100 (267)
+.++.. +...-+++|=|.|+.++..+|...+
T Consensus 20 ~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEE-GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHC-CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 444444 3456789999999999988886543
No 320
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=37.98 E-value=2.2e+02 Score=24.03 Aligned_cols=83 Identities=17% Similarity=0.218 Sum_probs=41.8
Q ss_pred EEEecCCCCC--hhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCC---c-----ccChHHhhH---HHHHHHHcCCCCC
Q 024469 12 FVLVHGVNHG--AWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE---D-----VHTFHAYSE---PLMEVLASLPAEE 78 (267)
Q Consensus 12 ivlvHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~---~-----~~~~~~~~~---~l~~~i~~l~~~~ 78 (267)
+++++|.+.+ ...-..+.+.|.++|++|..+...+-........ . ......+.. .+..+++.. +
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 79 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPIDATIILNLNMSKNPLSFLLALWKLRKILRQF---K 79 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchhhccceEEecccccchhhHHHHHHHHHHHHhc---C
Confidence 4445555422 2345668888988899988776544222111000 0 001111222 233444433 4
Q ss_pred cEEEEeeChhhHHHHHHhh
Q 024469 79 KVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 79 ~vilvGHSmGG~i~~~~a~ 97 (267)
+-+++.|+....+...++.
T Consensus 80 pdiv~~~~~~~~~~~~l~~ 98 (360)
T cd04951 80 PDVVHAHMFHANIFARLLR 98 (360)
T ss_pred CCEEEEcccchHHHHHHHH
Confidence 5577789987665555443
No 321
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=37.90 E-value=19 Score=32.39 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=26.7
Q ss_pred HHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCCccceE
Q 024469 69 EVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVA 106 (267)
Q Consensus 69 ~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~~v~~l 106 (267)
+.+.+. +..+-+++|-|.|+.+++.++.+.++.+..+
T Consensus 87 kaL~e~-gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 87 KALLDA-DLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333334 3457789999999999999987766666554
No 322
>PRK04940 hypothetical protein; Provisional
Probab=37.60 E-value=1.5e+02 Score=23.36 Aligned_cols=51 Identities=10% Similarity=0.020 Sum_probs=34.8
Q ss_pred EEEEEeCCCccCChHHHHHHHHcCCCC-eEEEecCCCCCCCCCCcHHHHHHHHHHHH
Q 024469 209 RVYLVCEEDIGLPKQFQHWMIQNYPVN-EVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 209 ~l~i~g~~D~~~~~~~~~~~~~~~p~~-~~~~i~~~gH~~~~e~p~~~~~~l~~f~~ 264 (267)
.+++..+.|.+++...+. +.+.+. ++.+.+|..|.. ++=++....|.+|..
T Consensus 127 ~~vllq~gDEvLDyr~a~---~~y~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTA---EELHPYYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred EEEEEeCCCcccCHHHHH---HHhccCceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 488899999999988665 344445 677788666654 334556666777764
No 323
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=37.38 E-value=1.4e+02 Score=22.99 Aligned_cols=55 Identities=15% Similarity=0.199 Sum_probs=28.9
Q ss_pred HHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHH
Q 024469 28 LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLAL 94 (267)
Q Consensus 28 ~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~ 94 (267)
+.+.+. .|-.|+++|.+|=-. +=+++|+.+.++-+ . +.+=+++||=|.|=--...
T Consensus 60 il~~i~-~~~~vi~Ld~~Gk~~---------sSe~fA~~l~~~~~-~-G~~i~f~IGG~~Gl~~~~~ 114 (155)
T COG1576 60 ILAAIP-KGSYVVLLDIRGKAL---------SSEEFADFLERLRD-D-GRDISFLIGGADGLSEAVK 114 (155)
T ss_pred HHHhcC-CCCeEEEEecCCCcC---------ChHHHHHHHHHHHh-c-CCeEEEEEeCcccCCHHHH
Confidence 344443 355788888886222 22455555544332 2 2223667787777553333
No 324
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=36.91 E-value=1.1e+02 Score=29.28 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=35.8
Q ss_pred cceEEEecCCCCCh---hchHHHHHHHhcCCCeEEEeCCC--CCCCCCCCCCcccChHHhhHHHHHHHHc
Q 024469 9 EKHFVLVHGVNHGA---WCWYKLKARLVAGGHRVTAVDLA--ASGINMKRIEDVHTFHAYSEPLMEVLAS 73 (267)
Q Consensus 9 ~~~ivlvHG~~~~~---~~w~~~~~~L~~~g~~via~Dl~--G~G~S~~~~~~~~~~~~~~~~l~~~i~~ 73 (267)
..|++||||.-... ..=..+...|+.+|..|-..=+| ||+.+. .. ...+....+.++++.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~---~~~~~~~~~~~~~~~ 615 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR--PE---NRVKVLKEILDWFKR 615 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC--ch---hHHHHHHHHHHHHHH
Confidence 47999999996433 23334667777778877666566 466654 11 223444455555553
No 325
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=36.80 E-value=22 Score=31.75 Aligned_cols=37 Identities=16% Similarity=0.088 Sum_probs=26.1
Q ss_pred HHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCCccceE
Q 024469 69 EVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVA 106 (267)
Q Consensus 69 ~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~~v~~l 106 (267)
+.+... +..+-++.|-|.|+++++.+|...++.+..+
T Consensus 103 kaL~e~-gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 103 KALWLR-GLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHc-CCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 333334 4467789999999999999987655554444
No 326
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=36.76 E-value=77 Score=25.10 Aligned_cols=61 Identities=15% Similarity=0.232 Sum_probs=36.3
Q ss_pred ccceEEEecCCCCChh---chHHHHHHHhcCCCeEEEeCCC--CCCCCCCCCCcccChHHhhHHHHHHHHc
Q 024469 8 EEKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLA--ASGINMKRIEDVHTFHAYSEPLMEVLAS 73 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~~---~w~~~~~~L~~~g~~via~Dl~--G~G~S~~~~~~~~~~~~~~~~l~~~i~~ 73 (267)
..+|++++||.-...- .=..+...|.+.|.++...-+| |||..... ...+.-+.+.++++.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~-----~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPE-----NRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHH-----HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCch-----hHHHHHHHHHHHHHH
Confidence 3689999999975432 2233566677777766655555 45543211 223566666677764
No 327
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=36.61 E-value=1.8e+02 Score=25.25 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=40.8
Q ss_pred HHHhcCCC-eEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH-HHHHHhhhC
Q 024469 30 ARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV-TLALAADKF 99 (267)
Q Consensus 30 ~~L~~~g~-~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~-i~~~~a~~~ 99 (267)
+.+...|. +|+..|.+. .. |+.+.|++.|.+++++.. -..++|+|||-=|- ++.++|.+.
T Consensus 42 ~~~~~~Gad~V~~~~~~~--------~~-~~~e~~~~al~~~i~~~~-p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 42 AQAIQLGANHVWKLSGKP--------DD-RMIEDYAGVMADTIRQHG-ADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred HHHHhcCCCEEEEecCcc--------cc-cChHHHHHHHHHHHHhhC-CCcEEEEcCCccHHHHHHHHHHHh
Confidence 44444443 778877641 12 677899999999998762 11589999998775 666666553
No 328
>PRK14974 cell division protein FtsY; Provisional
Probab=36.57 E-value=2.7e+02 Score=24.41 Aligned_cols=66 Identities=23% Similarity=0.266 Sum_probs=34.9
Q ss_pred cCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCC--CccceEEEE
Q 024469 34 AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP--HKISVAVFV 109 (267)
Q Consensus 34 ~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p--~~v~~lvli 109 (267)
..++.++.+|-+|....+ ..+.+.|..+.+.+ .-..++||.-++-|.-+..-|..+. -.+.++|+-
T Consensus 220 ~~~~DvVLIDTaGr~~~~---------~~lm~eL~~i~~~~-~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHTD---------ANLMDELKKIVRVT-KPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred hCCCCEEEEECCCccCCc---------HHHHHHHHHHHHhh-CCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 456777888877543321 24445555555544 2245677777766653343333332 245666654
No 329
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=36.35 E-value=64 Score=27.47 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=29.4
Q ss_pred CccceEEEecCCCCCh-----hchHHHHHHHhcCCCeEEEeCC
Q 024469 7 MEEKHFVLVHGVNHGA-----WCWYKLKARLVAGGHRVTAVDL 44 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~-----~~w~~~~~~L~~~g~~via~Dl 44 (267)
|+...|.+++|-.++- .+.+.+.+.|.+.||+|+.+|.
T Consensus 1 ~~~~~i~vl~gg~s~e~~vsl~s~~~v~~aL~~~g~~~~~~~~ 43 (296)
T PRK14569 1 MKNEKIVVLYGGDSPEREVSLKSGKAVLDSLISQGYDAVGVDA 43 (296)
T ss_pred CCCcEEEEEeCCCCCchHhHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 3456788999855332 4678899999999999998885
No 330
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=36.30 E-value=41 Score=29.07 Aligned_cols=21 Identities=19% Similarity=0.173 Sum_probs=17.0
Q ss_pred EEEEeeChhhHHHHHHhhhCC
Q 024469 80 VILVGHSLGGVTLALAADKFP 100 (267)
Q Consensus 80 vilvGHSmGG~i~~~~a~~~p 100 (267)
-.+.|-|+||.++..+|..++
T Consensus 34 D~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 34 DWIAGTSTGGILALALLHGKS 54 (312)
T ss_pred cEEEeeChHHHHHHHHHcCCC
Confidence 367899999999998886543
No 331
>PLN00022 electron transfer flavoprotein subunit alpha; Provisional
Probab=36.29 E-value=1.9e+02 Score=25.63 Aligned_cols=62 Identities=13% Similarity=0.028 Sum_probs=43.3
Q ss_pred HHHHHhc--CCC-eEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH-HHHHHhhhC
Q 024469 28 LKARLVA--GGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV-TLALAADKF 99 (267)
Q Consensus 28 ~~~~L~~--~g~-~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~-i~~~~a~~~ 99 (267)
....|.. .|. +|+..|-+. . ..|+.+.|++.|.+++++.. -.++|+|+|.=|- ++.++|.+.
T Consensus 75 ~a~~l~~~~~Gad~V~~~~~~~-------l-~~y~~e~~a~al~~li~~~~--P~~vL~~~T~~GrdlApRlAarL 140 (356)
T PLN00022 75 AASHAASSHPSVSEVLVADSDK-------L-THPLAEPWAKLVVLAQQKGG--YSHILAASTSFGKNVLPRAAALL 140 (356)
T ss_pred HHHHHhhccCCCCEEEEecCch-------h-cccChHHHHHHHHHHHHhcC--CCEEEECCCCchhHHHHHHHHHh
Confidence 3444543 243 777776552 1 34678999999999999873 5799999998885 677776654
No 332
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=35.91 E-value=62 Score=27.83 Aligned_cols=92 Identities=17% Similarity=0.191 Sum_probs=46.2
Q ss_pred eEEEecCCCCChhchHHHHHHHhc-CCCeEEEe----CCCCCCCCCCCC---CcccChHHhhHHHHHHHHcCCCCCcEEE
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVA-GGHRVTAV----DLAASGINMKRI---EDVHTFHAYSEPLMEVLASLPAEEKVIL 82 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~-~g~~via~----Dl~G~G~S~~~~---~~~~~~~~~~~~l~~~i~~l~~~~~vil 82 (267)
-|+|.|| ++...-.++..+-++ +.|+|++- .-.||-.+.... .++.-+.++ .+.+.+... .+|||
T Consensus 164 EviLT~g--~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~da--aVfA~MsrV---nKVIi 236 (353)
T KOG1465|consen 164 EVILTLG--SSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIPDA--AVFAMMSRV---NKVII 236 (353)
T ss_pred ceEEecC--ccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEeccH--HHHHHhhhc---ceEEE
Confidence 4789999 444444444444444 55898744 344554433211 011111221 233444433 58888
Q ss_pred EeeCh----------hhHHHHHHhhhCCCccceEEEEecc
Q 024469 83 VGHSL----------GGVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 83 vGHSm----------GG~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
.-|+. |+..+..+|+++.- =+++++|+
T Consensus 237 gt~avl~NGgl~~~~G~~~vAlaAk~h~v---Pv~VlAp~ 273 (353)
T KOG1465|consen 237 GTHAVLANGGLRAPSGVHTVALAAKHHSV---PVIVLAPM 273 (353)
T ss_pred EeeeEecCCCeeccchHHHHHHHHHhcCC---cEEEecch
Confidence 88875 44455566665432 24455543
No 333
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=35.39 E-value=98 Score=23.19 Aligned_cols=37 Identities=14% Similarity=-0.033 Sum_probs=29.9
Q ss_pred ceEEEecCCC----CChhchHHHHHHHhcCCC---eEEEeCCCC
Q 024469 10 KHFVLVHGVN----HGAWCWYKLKARLVAGGH---RVTAVDLAA 46 (267)
Q Consensus 10 ~~ivlvHG~~----~~~~~w~~~~~~L~~~g~---~via~Dl~G 46 (267)
..||+-|+++ ..+.....+...|...|| ++++++..|
T Consensus 18 vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 18 VVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred EEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 5789999996 355678999999998887 778888664
No 334
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=35.37 E-value=1.6e+02 Score=25.35 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=47.6
Q ss_pred CccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCC----CCC----CCC--------------CCCCCcccChHHhh
Q 024469 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL----AAS----GIN--------------MKRIEDVHTFHAYS 64 (267)
Q Consensus 7 ~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl----~G~----G~S--------------~~~~~~~~~~~~~~ 64 (267)
|..++||+|-|-.+++-+= ++-.|+.++..+|..|= +|. .+- -..+++.|+..+|.
T Consensus 1 ~~~~~ii~I~GpTasGKS~--LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~ 78 (300)
T PRK14729 1 MKENKIVFIFGPTAVGKSN--ILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFY 78 (300)
T ss_pred CCCCcEEEEECCCccCHHH--HHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHH
Confidence 3356789999987666542 44455544346666651 221 111 11123568999999
Q ss_pred HHHHHHHHcC-CCCCcEEEEeeC
Q 024469 65 EPLMEVLASL-PAEEKVILVGHS 86 (267)
Q Consensus 65 ~~l~~~i~~l-~~~~~vilvGHS 86 (267)
++..+.|+.+ ..++.++|||=|
T Consensus 79 ~~a~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 79 KEALKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCc
Confidence 9998888865 234668998844
No 335
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=35.27 E-value=1.1e+02 Score=24.96 Aligned_cols=49 Identities=22% Similarity=0.242 Sum_probs=35.1
Q ss_pred hHHhhHHHHHHHHcCCCCCcEEEEeeChhhH-HHHHHhhhCCCccceEEE
Q 024469 60 FHAYSEPLMEVLASLPAEEKVILVGHSLGGV-TLALAADKFPHKISVAVF 108 (267)
Q Consensus 60 ~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~-i~~~~a~~~p~~v~~lvl 108 (267)
-.+-.+.|.+.|.++...+++++.|=+-||. ++...|+...-..+-+|+
T Consensus 7 R~dAGr~La~~l~~~~~~~~~iVlaLpRGGvpva~evA~~lga~ldvliV 56 (220)
T COG1926 7 RTDAGRKLAQELAALRDLKDVIVLALPRGGVPVAFEVAQALGAPLDVLIV 56 (220)
T ss_pred HHHHHHHHHHHHHhhccCCCcEEEEecCCCchHHHHHHHHhCCCeeEEEE
Confidence 3566777888888875457999999999998 566667766555444443
No 336
>PF03283 PAE: Pectinacetylesterase
Probab=35.12 E-value=57 Score=28.87 Aligned_cols=37 Identities=32% Similarity=0.623 Sum_probs=23.2
Q ss_pred CCCCCcEEEEeeChhhHHHHHH----hhhCCCccceEEEEe
Q 024469 74 LPAEEKVILVGHSLGGVTLALA----ADKFPHKISVAVFVT 110 (267)
Q Consensus 74 l~~~~~vilvGHSmGG~i~~~~----a~~~p~~v~~lvli~ 110 (267)
++.-++|+|-|.|-||.-+... +...|..++-..+.+
T Consensus 152 l~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~D 192 (361)
T PF03283_consen 152 LPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSD 192 (361)
T ss_pred CcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecc
Confidence 4344689999999999855543 345665444333334
No 337
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=35.01 E-value=2.3e+02 Score=25.11 Aligned_cols=79 Identities=16% Similarity=0.168 Sum_probs=46.5
Q ss_pred ccCCccceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEE-
Q 024469 4 VVGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVIL- 82 (267)
Q Consensus 4 ~~~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vil- 82 (267)
..|..++||++--|.+.+.+.|..-++.+.+.|-.=+++-.+| -|..+.....+++ ...+ ..++..-. -+|++
T Consensus 220 ~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg--~s~yp~~~~~~ld--l~~i-~~lk~~~~-~PV~~d 293 (360)
T PRK12595 220 AAGRVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERG--IRTYEKATRNTLD--ISAV-PILKQETH-LPVMVD 293 (360)
T ss_pred HHHccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCc--cCCCCCCCCCCcC--HHHH-HHHHHHhC-CCEEEe
Confidence 3456689999999999999999999999977665334444444 2332211111221 1111 22333212 37777
Q ss_pred EeeChh
Q 024469 83 VGHSLG 88 (267)
Q Consensus 83 vGHSmG 88 (267)
..||.|
T Consensus 294 ~~Hs~G 299 (360)
T PRK12595 294 VTHSTG 299 (360)
T ss_pred CCCCCc
Confidence 799977
No 338
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=34.58 E-value=1.1e+02 Score=24.35 Aligned_cols=72 Identities=19% Similarity=0.129 Sum_probs=43.8
Q ss_pred HHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCC--Cccce
Q 024469 28 LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP--HKISV 105 (267)
Q Consensus 28 ~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p--~~v~~ 105 (267)
..+.+..+++.+|.+|=+|.... -.+..+++.++++.. ....++||--+..+.-....+.++- -.+.+
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~~---------d~~~~~el~~~~~~~-~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~ 144 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSPR---------DEELLEELKKLLEAL-NPDEVHLVLSATMGQEDLEQALAFYEAFGIDG 144 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSST---------HHHHHHHHHHHHHHH-SSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCE
T ss_pred HHHHHhhcCCCEEEEecCCcchh---------hHHHHHHHHHHhhhc-CCccceEEEecccChHHHHHHHHHhhcccCce
Confidence 34445556799999999864422 134556666666665 3357888877777765544443332 24788
Q ss_pred EEEE
Q 024469 106 AVFV 109 (267)
Q Consensus 106 lvli 109 (267)
+|+-
T Consensus 145 lIlT 148 (196)
T PF00448_consen 145 LILT 148 (196)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8864
No 339
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=34.12 E-value=95 Score=23.01 Aligned_cols=55 Identities=15% Similarity=0.140 Sum_probs=30.7
Q ss_pred ceEEEecCCCCChhch--HHHHHHHhcCCC---eEE----EeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcC
Q 024469 10 KHFVLVHGVNHGAWCW--YKLKARLVAGGH---RVT----AVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w--~~~~~~L~~~g~---~vi----a~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l 74 (267)
|-|+-.||+...+-.| +-+++.|=..|- .|. ..|.| +...+++|-++|.+.|...
T Consensus 53 pLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP----------~~~~v~~Yk~~L~~~I~~~ 116 (127)
T PF06309_consen 53 PLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP----------HNSNVDEYKEQLKSWIRGN 116 (127)
T ss_pred CEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC----------CchHHHHHHHHHHHHHHHH
Confidence 4555689998888777 223333211121 122 33443 1236778888888887643
No 340
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=33.57 E-value=3.3e+02 Score=24.16 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=22.4
Q ss_pred CCCcEEEEeeC-hhhHHHHHHhhhCCCccceEEEEec
Q 024469 76 AEEKVILVGHS-LGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 76 ~~~~vilvGHS-mGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
...+|.|+|-. .|+.++..++. ..|..+++++.
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~---~Gvg~i~lvD~ 167 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAA---AGVGTLGIVDH 167 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHH---cCCCeEEEEeC
Confidence 34689999874 45555555554 35788999986
No 341
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=33.41 E-value=29 Score=26.75 Aligned_cols=48 Identities=19% Similarity=0.207 Sum_probs=23.7
Q ss_pred CCCCCCCCCC--CCCcccChHHhhHHHH----HHHHcCC---CCCcEEEEeeChhhH
Q 024469 43 DLAASGINMK--RIEDVHTFHAYSEPLM----EVLASLP---AEEKVILVGHSLGGV 90 (267)
Q Consensus 43 Dl~G~G~S~~--~~~~~~~~~~~~~~l~----~~i~~l~---~~~~vilvGHSmGG~ 90 (267)
-+-|||.... ..-..++-.+++..|. .+-+... .-+++.|||.||+..
T Consensus 60 ~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 60 QLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3557886621 1112346677777663 3332221 125799999999887
No 342
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones]
Probab=33.38 E-value=1.3e+02 Score=29.78 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=36.1
Q ss_pred ChHHhhHHHHHHHHcCC--CCCcEEEEeeChhhHHHHHHhhhCCCccceEEEEec
Q 024469 59 TFHAYSEPLMEVLASLP--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 59 ~~~~~~~~l~~~i~~l~--~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli~~ 111 (267)
-++..+.++.+-+|.+. ..++|.++|-+==== ..-=|..+|.|+++|+++.+
T Consensus 789 VMDRVVSQLLAELDgls~~~s~~VFViGATNRPD-LLDpALLRPGRFDKLvyvG~ 842 (953)
T KOG0736|consen 789 VMDRVVSQLLAELDGLSDSSSQDVFVIGATNRPD-LLDPALLRPGRFDKLVYVGP 842 (953)
T ss_pred cHHHHHHHHHHHhhcccCCCCCceEEEecCCCcc-ccChhhcCCCccceeEEecC
Confidence 56788899999999884 345788887321110 11225568899999999985
No 343
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=33.28 E-value=62 Score=27.98 Aligned_cols=30 Identities=33% Similarity=0.362 Sum_probs=20.1
Q ss_pred HHHHHcCC-CCCcEEEEeeChhhHHHHHHhh
Q 024469 68 MEVLASLP-AEEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 68 ~~~i~~l~-~~~~vilvGHSmGG~i~~~~a~ 97 (267)
.+.+.+.+ ..++..+.|||+|=..+..++.
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 34444433 3467899999999887666554
No 344
>cd02908 Macro_Appr_pase_like Macro domain, Appr-1"-pase_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family is composed of uncharacterized proteins that show similarity to Appr-1"-pase, containing conserved putative active site residues. Appr-1"-pase is a phosphatase specific for ADP-ribose-1"-monophosphate.
Probab=33.28 E-value=1.5e+02 Score=22.74 Aligned_cols=63 Identities=21% Similarity=0.209 Sum_probs=39.9
Q ss_pred chHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 24 CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 24 ~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
+|+.....-.+.+.+.||+-+-|-|.-.-+.. .....+.+.+.++++.....+++++|-++--
T Consensus 93 ~~~~~L~~a~~~~~~sIa~P~igtG~~g~p~~--~~a~~~~~ai~~fl~~~~~l~~V~~v~~~~~ 155 (165)
T cd02908 93 CYRNSLELARENGLRSIAFPAISTGVYGYPLD--EAARIALKTVREFLEEHDAIERVIFVCFSEE 155 (165)
T ss_pred HHHHHHHHHHHcCCCEEEECceecCCCCCCHH--HHHHHHHHHHHHHHhcCCCCCEEEEEeCCHH
Confidence 56666655556678889988888776554432 2445556666777765333467888777643
No 345
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=33.26 E-value=56 Score=26.59 Aligned_cols=28 Identities=32% Similarity=0.260 Sum_probs=19.4
Q ss_pred EEEecCCCCChhchHHHHHHHhcCCCeEEEeCC
Q 024469 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL 44 (267)
Q Consensus 12 ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl 44 (267)
=||+-|-|.+.. +..|+++||+|+++|+
T Consensus 40 rvL~~gCG~G~d-----a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 40 RVLVPLCGKSLD-----MLWLAEQGHEVLGVEL 67 (218)
T ss_pred eEEEeCCCChHh-----HHHHHhCCCeEEEEcc
Confidence 456666665543 3356778999999997
No 346
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=33.03 E-value=82 Score=26.86 Aligned_cols=50 Identities=28% Similarity=0.400 Sum_probs=32.6
Q ss_pred HhhHHHHHHHHcCCCC--CcEEEEeeChhhHHHHHH---hhhCCCccceEEEEec
Q 024469 62 AYSEPLMEVLASLPAE--EKVILVGHSLGGVTLALA---ADKFPHKISVAVFVTA 111 (267)
Q Consensus 62 ~~~~~l~~~i~~l~~~--~~vilvGHSmGG~i~~~~---a~~~p~~v~~lvli~~ 111 (267)
.+.+.|.+-++++... -+++|.|-|+|+.-+..+ +...-+++.+.+...+
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~Gp 145 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGP 145 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCC
Confidence 3445555666677322 369999999999844433 2334467889888875
No 347
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=32.79 E-value=70 Score=23.93 Aligned_cols=41 Identities=24% Similarity=0.187 Sum_probs=26.2
Q ss_pred eEEEecCCCCChhc--hHHHHHHHhcCCCeEEEeCCCCCCCCC
Q 024469 11 HFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINM 51 (267)
Q Consensus 11 ~ivlvHG~~~~~~~--w~~~~~~L~~~g~~via~Dl~G~G~S~ 51 (267)
|+|.|-|.-.++-+ =+.++..|..+||+|.++=.-+||..+
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 67888888544433 367888898899999877556666554
No 348
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=32.37 E-value=80 Score=26.31 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=23.2
Q ss_pred HHHHHHcCCCCC-cEEEEeeChhhHHHHHHhhhCCC
Q 024469 67 LMEVLASLPAEE-KVILVGHSLGGVTLALAADKFPH 101 (267)
Q Consensus 67 l~~~i~~l~~~~-~vilvGHSmGG~i~~~~a~~~p~ 101 (267)
+.+.+.+. +.. --+++|-|.|+.++..++...+.
T Consensus 16 vl~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 16 VLDAFLEA-GIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHc-CCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 34444444 234 45899999999999988766544
No 349
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=32.20 E-value=2.5e+02 Score=25.59 Aligned_cols=69 Identities=13% Similarity=0.223 Sum_probs=43.3
Q ss_pred HHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCC--ccceEEE
Q 024469 31 RLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISVAVF 108 (267)
Q Consensus 31 ~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~--~v~~lvl 108 (267)
.+...+|.++.+|-+|.-.. -..+.+.+..+.+.. .-..++||--++-|--+...|..+.+ .+.++|+
T Consensus 177 ~~~~~~~DvViIDTaGr~~~---------d~~lm~El~~i~~~~-~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 177 KFKKENFDIIIVDTSGRHKQ---------EDSLFEEMLQVAEAI-QPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred HHHhCCCCEEEEECCCCCcc---------hHHHHHHHHHHhhhc-CCcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 34445799999998873221 134556666666555 33578999888888655555555533 4677776
Q ss_pred E
Q 024469 109 V 109 (267)
Q Consensus 109 i 109 (267)
-
T Consensus 247 T 247 (429)
T TIGR01425 247 T 247 (429)
T ss_pred E
Confidence 4
No 350
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=32.05 E-value=63 Score=22.85 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=25.3
Q ss_pred EEEecCCCCChhchHHHHHHHhcC-CCeEEEeCC--CCCCCC
Q 024469 12 FVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDL--AASGIN 50 (267)
Q Consensus 12 ivlvHG~~~~~~~w~~~~~~L~~~-g~~via~Dl--~G~G~S 50 (267)
+++|-|.++++-+. ++..|++. |+.++-.|- .-.+..
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEecccc
Confidence 57888997666554 55566654 788888887 554544
No 351
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=31.62 E-value=1.1e+02 Score=26.06 Aligned_cols=43 Identities=19% Similarity=0.294 Sum_probs=30.7
Q ss_pred HHHHHHHcC--CCCCcEEEEeeChhhHHHHHHhhhCCCccceEEEE
Q 024469 66 PLMEVLASL--PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFV 109 (267)
Q Consensus 66 ~l~~~i~~l--~~~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvli 109 (267)
-+..+++.+ .++..+-=||..+||+ +..+|+++..+|.++.+.
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGWG~l-~~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGWGGL-AIYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCChhHH-HHHHHHHcCCEEEEeeCC
Confidence 344455555 3445677789999999 778888888788887653
No 352
>cd06149 ISG20 DEDDh 3'-5' exonuclease domain of Interferon Stimulated Gene product of 20 kDa, and similar proteins. Interferon (IFN) Stimulated Gene product of 20 kDa (ISG20) is an IFN-induced antiviral exonuclease with a strong preference for single-stranded RNA and minor activity towards single-stranded DNA. It was also independently identified by its response to estrogen and was called HEM45 (human estrogen regulated transcript). ISG20 is a DEDDh-type DnaQ-like 3'-5' exonuclease containing three conserved sequence motifs termed ExoI, ExoII and ExoIII with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. ISG20 may be a major effector of innate immunity against pathogens including viruses, bacteria, and parasites. It is located in promyelocytic leukemia (PML) nuclear bodies, sites for oncogenic DNA viral transcription and repli
Probab=31.59 E-value=36 Score=26.00 Aligned_cols=35 Identities=23% Similarity=0.559 Sum_probs=21.7
Q ss_pred CCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeCh
Q 024469 47 SGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 47 ~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSm 87 (267)
||-++....+..++++....+.+++ +..+||||++
T Consensus 51 ~GIt~~~l~~a~~~~~v~~~l~~~l------~~~vlV~Hn~ 85 (157)
T cd06149 51 SGIRRQHLVNATPFAVAQKEILKIL------KGKVVVGHAI 85 (157)
T ss_pred CCCCHHHHhcCCCHHHHHHHHHHHc------CCCEEEEeCc
Confidence 6666543334457776666665554 2348999994
No 353
>PRK00431 RNase III inhibitor; Provisional
Probab=31.55 E-value=2.5e+02 Score=21.77 Aligned_cols=63 Identities=16% Similarity=0.097 Sum_probs=37.8
Q ss_pred chHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 24 CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 24 ~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
+++..+....+.+.+.|++-.-|.|.-.-+.. .....+.+.+.++++.-...+++++|-++--
T Consensus 100 ~~~~~L~~a~~~~~~sIa~P~lgtG~~g~p~~--~~A~~~~~~i~~f~~~~~~l~~I~~v~~~~~ 162 (177)
T PRK00431 100 AYRNSLRLAAELGLRSIAFPAISTGVYGYPLE--DAARIAVKTVREFLTRHKSPEEVYFVCYDEE 162 (177)
T ss_pred HHHHHHHHHHHcCCceEEECccccCccCCCHH--HHHHHHHHHHHHHHhcCCCcCEEEEEECCHH
Confidence 45555555556678888888888776554432 2445555666666544333456777777543
No 354
>PRK11916 electron transfer flavoprotein subunit YdiR; Provisional
Probab=31.37 E-value=3.5e+02 Score=23.47 Aligned_cols=60 Identities=12% Similarity=0.188 Sum_probs=42.1
Q ss_pred HHHHhcCCC-eEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH-HHHHHhhhC
Q 024469 29 KARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV-TLALAADKF 99 (267)
Q Consensus 29 ~~~L~~~g~-~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~-i~~~~a~~~ 99 (267)
.+.|...|. +|+..|.++ . .+.-+.|++.+.+++++.. -.++|+++|.=|- ++.++|.+.
T Consensus 41 ~~~l~~~Gad~V~~~~~~~--~-------~~~~e~~~~al~~~i~~~~--P~~vL~~~T~~Grdla~rlAarL 102 (312)
T PRK11916 41 AQAVMPYGPKCIYVLEQND--A-------LQRTENYAESIAALLKDKH--PAMLLLAATKRGKALAARLSVQL 102 (312)
T ss_pred HHHHHhcCCCEEEEeCCcc--c-------ccChHHHHHHHHHHHHhcC--CCEEEECCCcchHHHHHHHHHHh
Confidence 555654454 788888762 1 1335788999999988763 5799999998885 677776554
No 355
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=31.36 E-value=1.1e+02 Score=25.72 Aligned_cols=57 Identities=9% Similarity=0.108 Sum_probs=40.7
Q ss_pred CccEEEEEeC------CCccCChHHHHHHHHcCCC--C--eEEEec--CCCCCCCCCCcHHHHHHHHHHH
Q 024469 206 SVKRVYLVCE------EDIGLPKQFQHWMIQNYPV--N--EVMEIK--GGDHMAMLSDPQKLCDCLSQIS 263 (267)
Q Consensus 206 ~iP~l~i~g~------~D~~~~~~~~~~~~~~~p~--~--~~~~i~--~~gH~~~~e~p~~~~~~l~~f~ 263 (267)
.+.++-|.|. -|..||...+..+...+.+ . +..+|. ++.|.-..|.| +|.+.|.+|+
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FL 252 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFL 252 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHH
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHh
Confidence 5778999998 5899999988766554432 2 345564 46899988877 5668888887
No 356
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=30.71 E-value=35 Score=29.60 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=22.5
Q ss_pred HHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCC
Q 024469 69 EVLASLPAEEKVILVGHSLGGVTLALAADKFPH 101 (267)
Q Consensus 69 ~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~ 101 (267)
+.+... +..+-++.|-|.|+.++..++...++
T Consensus 88 kaL~e~-gl~p~~i~GsSaGAivaa~~~~~t~~ 119 (323)
T cd07231 88 RTLVEH-QLLPRVIAGSSVGSIVCAIIATRTDE 119 (323)
T ss_pred HHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 333334 34567899999999999888765443
No 357
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=30.61 E-value=1.1e+02 Score=23.71 Aligned_cols=33 Identities=36% Similarity=0.531 Sum_probs=20.4
Q ss_pred CcEEEEee--ChhhHHHHHHhh-hCCCcc--ceEEEEe
Q 024469 78 EKVILVGH--SLGGVTLALAAD-KFPHKI--SVAVFVT 110 (267)
Q Consensus 78 ~~vilvGH--SmGG~i~~~~a~-~~p~~v--~~lvli~ 110 (267)
..+.|||| +||-.+...... +.+..+ ++++.++
T Consensus 102 ~~vllVgH~P~l~~l~~~L~~~~~~~~~fptsgia~l~ 139 (163)
T COG2062 102 GSVLLVGHNPLLEELALLLAGGARLPVKFPTSGIAVLE 139 (163)
T ss_pred ceEEEECCCccHHHHHHHHccccccccCCCcccEEEEE
Confidence 58999999 777775554443 444444 3455554
No 358
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=30.54 E-value=85 Score=25.92 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=35.9
Q ss_pred EEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC-CCCcE--EEEeeChhhH-HHHHHh
Q 024469 39 VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKV--ILVGHSLGGV-TLALAA 96 (267)
Q Consensus 39 via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~v--ilvGHSmGG~-i~~~~a 96 (267)
|..+|-||...|-+. +...+..+...+.+.+.... .+-|+ .|+|++|+|. ++..+.
T Consensus 68 v~lVD~~sQa~grre--EllGi~~alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA~Glq 127 (234)
T PF06833_consen 68 VALVDVPSQAYGRRE--ELLGINQALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLAHGLQ 127 (234)
T ss_pred EEEEeCCccccchHH--HHhhHHHHHHHHHHHHHHHHHcCCCeEEEEecccccHHHHHHHHH
Confidence 447799987776432 45567777776666665442 23454 3679999997 555554
No 359
>KOG2248 consensus 3'-5' exonuclease [Replication, recombination and repair]
Probab=30.15 E-value=46 Score=29.69 Aligned_cols=42 Identities=33% Similarity=0.390 Sum_probs=24.8
Q ss_pred hHHHHHHHHcCCCCCcEEEEeeChhhH-HHHHHhhhCCCccceEEE
Q 024469 64 SEPLMEVLASLPAEEKVILVGHSLGGV-TLALAADKFPHKISVAVF 108 (267)
Q Consensus 64 ~~~l~~~i~~l~~~~~vilvGHSmGG~-i~~~~a~~~p~~v~~lvl 108 (267)
.+++-..+..+ ...+-||||||+=-= -++.. .||.-|+--++
T Consensus 280 l~dvq~~l~~~-~~~~TILVGHSLenDL~aLKl--~H~~ViDTa~l 322 (380)
T KOG2248|consen 280 LEDVQKELLEL-ISKNTILVGHSLENDLKALKL--DHPSVIDTAVL 322 (380)
T ss_pred HHHHHHHHHhh-cCcCcEEEeechhhHHHHHhh--hCCceeeeeEE
Confidence 34555555555 446899999999754 33333 35655554433
No 360
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=30.14 E-value=62 Score=26.18 Aligned_cols=28 Identities=36% Similarity=0.322 Sum_probs=18.9
Q ss_pred EEEecCCCCChhchHHHHHHHhcCCCeEEEeCC
Q 024469 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL 44 (267)
Q Consensus 12 ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl 44 (267)
=||+-|-|.+.. +..|+++||+|+++|+
T Consensus 37 rvLd~GCG~G~d-----a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 37 RVFVPLCGKSLD-----LAWLAEQGHRVLGVEL 64 (213)
T ss_pred eEEEeCCCchhH-----HHHHHhCCCeEEEEeC
Confidence 355556555543 3456778999999997
No 361
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=30.05 E-value=1.7e+02 Score=25.30 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=23.4
Q ss_pred EEEecCCCCChhchHHHHHHHhcCCCeEEEeCCC
Q 024469 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (267)
Q Consensus 12 ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~ 45 (267)
++...|.+.+-..+..++..|.+.||.|..+-.+
T Consensus 5 ~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~ 38 (357)
T PRK00726 5 LLAGGGTGGHVFPALALAEELKKRGWEVLYLGTA 38 (357)
T ss_pred EEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECC
Confidence 3444566655555668899998889998766443
No 362
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=29.90 E-value=1.1e+02 Score=23.45 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=22.3
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHhhh
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~ 98 (267)
+.+.++.. +...-+++|=|.|+.++..++..
T Consensus 18 vl~~L~~~-~~~~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 18 VLKALEEA-GIPIDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHc-CCCeeEEEEECHHHHHHHHHHcC
Confidence 44444444 33567899999999999888854
No 363
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=29.80 E-value=38 Score=29.58 Aligned_cols=18 Identities=33% Similarity=0.307 Sum_probs=14.3
Q ss_pred EEEEeeChhhHHHHHHhh
Q 024469 80 VILVGHSLGGVTLALAAD 97 (267)
Q Consensus 80 vilvGHSmGG~i~~~~a~ 97 (267)
..++|||+|=..++.+|.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 367999999987777664
No 364
>PRK06849 hypothetical protein; Provisional
Probab=29.16 E-value=2.5e+02 Score=24.87 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=43.8
Q ss_pred EEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCC--CCCC-------cccChHHhhHHHHHHHHcCCCCCcEEE
Q 024469 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINM--KRIE-------DVHTFHAYSEPLMEVLASLPAEEKVIL 82 (267)
Q Consensus 12 ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~--~~~~-------~~~~~~~~~~~l~~~i~~l~~~~~vil 82 (267)
=|||=|...... ..++..|.+.|++|++.|-.....+. +..+ ...+-+.|.+.|.++++.. + -++++
T Consensus 6 ~VLI~G~~~~~~--l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~-~-id~vI 81 (389)
T PRK06849 6 TVLITGARAPAA--LELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRE-N-IDLLI 81 (389)
T ss_pred EEEEeCCCcHHH--HHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHc-C-CCEEE
Confidence 344446544321 24677888889999999876433211 1011 1124567899999999876 3 46777
Q ss_pred EeeCh
Q 024469 83 VGHSL 87 (267)
Q Consensus 83 vGHSm 87 (267)
-+.+-
T Consensus 82 P~~e~ 86 (389)
T PRK06849 82 PTCEE 86 (389)
T ss_pred ECChH
Confidence 77763
No 365
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=29.11 E-value=1.5e+02 Score=23.93 Aligned_cols=29 Identities=24% Similarity=0.249 Sum_probs=18.2
Q ss_pred hHHHHHHHHcCCCCCcEEEEeeChhhHHHH
Q 024469 64 SEPLMEVLASLPAEEKVILVGHSLGGVTLA 93 (267)
Q Consensus 64 ~~~l~~~i~~l~~~~~vilvGHSmGG~i~~ 93 (267)
.+.|.+.++.. ..-+.+++=|||||...+
T Consensus 111 ~~~ir~~~e~~-d~~~~~~i~~slgGGTGS 139 (216)
T PF00091_consen 111 LEQIRKEIEKC-DSLDGFFIVHSLGGGTGS 139 (216)
T ss_dssp HHHHHHHHHTS-TTESEEEEEEESSSSHHH
T ss_pred ccccchhhccc-cccccceecccccceecc
Confidence 34444455433 234789999999997433
No 366
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=28.64 E-value=1.9e+02 Score=25.30 Aligned_cols=45 Identities=24% Similarity=0.279 Sum_probs=32.2
Q ss_pred HHHHHHHcCCCCCcEEEEeeChhh--HHHHHHhhhCCCccceEEEEec
Q 024469 66 PLMEVLASLPAEEKVILVGHSLGG--VTLALAADKFPHKISVAVFVTA 111 (267)
Q Consensus 66 ~l~~~i~~l~~~~~vilvGHSmGG--~i~~~~a~~~p~~v~~lvli~~ 111 (267)
.+..++... ...++||||-|=== -|...++.++|+||.++-.=|.
T Consensus 267 ~l~nil~~~-p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdv 313 (373)
T COG4850 267 SLRNILRRY-PDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDV 313 (373)
T ss_pred HHHHHHHhC-CCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeec
Confidence 344466667 55899999998322 2566678899999999866553
No 367
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=28.48 E-value=2.5e+02 Score=22.08 Aligned_cols=59 Identities=15% Similarity=0.066 Sum_probs=33.0
Q ss_pred ccceEEEecCC-CCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHH-HcC
Q 024469 8 EEKHFVLVHGV-NHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVL-ASL 74 (267)
Q Consensus 8 ~~~~ivlvHG~-~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i-~~l 74 (267)
.+.|++++.-- +.+... +..+..|++.|+.++-|. +|+=. ...+++++++.+..-+ +.+
T Consensus 111 ~~~pv~i~P~~m~~~~~~-~~Nl~~L~~~G~~ii~P~-~g~~~------~p~~~~~~~~~i~~~~l~~l 171 (181)
T TIGR00421 111 ERRKLVLVPRETPLNSIH-LENMLRLSRMGAIILPPM-PAFYT------RPKSVEDMIDFIVGRVLDQL 171 (181)
T ss_pred cCCCEEEEeCCCcCCHHH-HHHHHHHHHCCCEEECCC-CcccC------CCCCHHHHHHHHHHHHHHHc
Confidence 35677777732 223323 445567888899887665 44311 1237788777655443 444
No 368
>COG0337 AroB 3-dehydroquinate synthetase [Amino acid transport and metabolism]
Probab=28.48 E-value=3.9e+02 Score=23.73 Aligned_cols=71 Identities=23% Similarity=0.275 Sum_probs=40.1
Q ss_pred eEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhH
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~ 90 (267)
.+++||--.-.......+...|.+.|+.|..+.+|. |.+ .-+++.+.+-...+++ .+..++-.||+ +||.
T Consensus 35 k~~ivtd~~v~~~y~~~~~~~l~~~g~~v~~~~lp~-GE~------~Ksl~~~~~i~~~ll~-~~~~R~s~iia--lGGG 104 (360)
T COG0337 35 KVAIVTDETVAPLYLEKLLATLEAAGVEVDSIVLPD-GEE------YKSLETLEKIYDALLE-AGLDRKSTLIA--LGGG 104 (360)
T ss_pred eEEEEECchhHHHHHHHHHHHHHhcCCeeeEEEeCC-Ccc------cccHHHHHHHHHHHHH-cCCCCCcEEEE--ECCh
Confidence 556666554444444667777888888887777773 221 2366555554444444 33445666665 4444
Q ss_pred H
Q 024469 91 T 91 (267)
Q Consensus 91 i 91 (267)
+
T Consensus 105 v 105 (360)
T COG0337 105 V 105 (360)
T ss_pred H
Confidence 3
No 369
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=28.38 E-value=3.6e+02 Score=24.60 Aligned_cols=71 Identities=20% Similarity=0.195 Sum_probs=42.5
Q ss_pred HHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCC--ccceE
Q 024469 29 KARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISVA 106 (267)
Q Consensus 29 ~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~--~v~~l 106 (267)
...+...+|.++.+|-+|....+ +...+.+.++.+.+ .-..++||--++-|--+...|..+-+ .+.++
T Consensus 175 l~~~~~~~~DvVIIDTaGr~~~d---------~~l~~eL~~i~~~~-~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~gi 244 (428)
T TIGR00959 175 LEYAKENGFDVVIVDTAGRLQID---------EELMEELAAIKEIL-NPDEILLVVDAMTGQDAVNTAKTFNERLGLTGV 244 (428)
T ss_pred HHHHHhcCCCEEEEeCCCccccC---------HHHHHHHHHHHHhh-CCceEEEEEeccchHHHHHHHHHHHhhCCCCEE
Confidence 33444567999999998754321 23445555555544 23567888777766555555554432 46788
Q ss_pred EEE
Q 024469 107 VFV 109 (267)
Q Consensus 107 vli 109 (267)
|+-
T Consensus 245 IlT 247 (428)
T TIGR00959 245 VLT 247 (428)
T ss_pred EEe
Confidence 764
No 370
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=28.15 E-value=1e+02 Score=25.90 Aligned_cols=47 Identities=17% Similarity=0.125 Sum_probs=31.1
Q ss_pred CccEEEEEeCCCc---------cCChHH--HHHHHHcCCCCeEEEecCCCCCCCCCCc
Q 024469 206 SVKRVYLVCEEDI---------GLPKQF--QHWMIQNYPVNEVMEIKGGDHMAMLSDP 252 (267)
Q Consensus 206 ~iP~l~i~g~~D~---------~~~~~~--~~~~~~~~p~~~~~~i~~~gH~~~~e~p 252 (267)
++|+++|..+-+. +.|... .+.+.+..+.+-..++.+.||+=|+++.
T Consensus 154 ~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 154 SMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 5899888765552 445442 2333444444556677889999999988
No 371
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=28.11 E-value=2.2e+02 Score=24.15 Aligned_cols=56 Identities=13% Similarity=0.066 Sum_probs=37.6
Q ss_pred CCCCccEEEEEeCCCccCChHHHHHHHHcCCCCeEEEe-cCCCC-CCCCCCcHHHHHHHHHHHH
Q 024469 203 GYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEI-KGGDH-MAMLSDPQKLCDCLSQISL 264 (267)
Q Consensus 203 ~~~~iP~l~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i-~~~gH-~~~~e~p~~~~~~l~~f~~ 264 (267)
.+..+|+.++-|++ ..+++..+..|..+.+.+ ++.|+ ..---.|++..+.|++-++
T Consensus 144 g~~gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~ 201 (270)
T cd08769 144 GEFGVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVK 201 (270)
T ss_pred hhcCCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHH
Confidence 34489999999954 445555667799888777 55563 4444566777777766553
No 372
>PF00809 Pterin_bind: Pterin binding enzyme This Prosite entry is a subset of the Pfam family; InterPro: IPR000489 The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ]. Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (2.1.1.13 from EC), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier. Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (2.5.1.15 from EC). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate. Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. ; GO: 0042558 pteridine-containing compound metabolic process; PDB: 2VP8_B 2BMB_A 2Y5S_B 2Y5J_A 3BOF_B 1Q7Q_B 1Q85_B 1Q7Z_A 1Q7M_A 1Q8A_B ....
Probab=27.75 E-value=1.2e+02 Score=24.46 Aligned_cols=69 Identities=22% Similarity=0.155 Sum_probs=35.9
Q ss_pred cceEEEecCC--CC----Ch----hchHHHHHHHhc-------CCC--eEEEeCCCCCCCCCCCCCcccChHHhhHHHHH
Q 024469 9 EKHFVLVHGV--NH----GA----WCWYKLKARLVA-------GGH--RVTAVDLAASGINMKRIEDVHTFHAYSEPLME 69 (267)
Q Consensus 9 ~~~ivlvHG~--~~----~~----~~w~~~~~~L~~-------~g~--~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~ 69 (267)
+.++|++|-- .. .. ..+..+...|.+ .|. .=|.+| ||.|.+... +..-.+.+
T Consensus 116 ~~~vV~m~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~l~~~Gi~~~~Ii~D-Pgigf~~~~--------~~~~~~l~ 186 (210)
T PF00809_consen 116 GAPVVLMHSDGNPKGMPETADYRLDIAEEIIEFLEERIEALEKAGIPRERIILD-PGIGFGKDP--------EQNLELLR 186 (210)
T ss_dssp TSEEEEESESSETTTTTSSHHHSHSHHHHHHHHHHHHHHHHHHTT--GGGEEEE-TTTTSSTTH--------HHHHHHHH
T ss_pred CCEEEEEecccccccccccchhhhhHHHHHHHHHHHHHHHHHHcCCCHHHEeec-cccCcCCCH--------HHHHHHHH
Confidence 5688888855 21 11 335566666654 565 457778 887773211 22222223
Q ss_pred HHHcCCCC-CcEEEEeeC
Q 024469 70 VLASLPAE-EKVILVGHS 86 (267)
Q Consensus 70 ~i~~l~~~-~~vilvGHS 86 (267)
.++.+... ..++++|+|
T Consensus 187 ~i~~~~~~~~~p~l~~~s 204 (210)
T PF00809_consen 187 NIEELKELFGYPILVGGS 204 (210)
T ss_dssp THHHHHTTSSSEBEEEET
T ss_pred HHHHHHHhCCCCEEEEEe
Confidence 33333122 467888887
No 373
>PLN02496 probable phosphopantothenoylcysteine decarboxylase
Probab=27.66 E-value=2.9e+02 Score=22.45 Aligned_cols=63 Identities=13% Similarity=-0.012 Sum_probs=39.2
Q ss_pred cceEEEecCCCCChh---chHHHHHHHhcCCCeEEEeCC--CCCCCCCCCCCcccChHHhhHHHHHHHHc
Q 024469 9 EKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDL--AASGINMKRIEDVHTFHAYSEPLMEVLAS 73 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~---~w~~~~~~L~~~g~~via~Dl--~G~G~S~~~~~~~~~~~~~~~~l~~~i~~ 73 (267)
+.|++++.......| ..+..+..|++.|+.|+.|.- ..+|..+ .+.....++....+..++..
T Consensus 132 ~~Pv~iaPaMN~~Mw~~Pat~~nl~~L~~~G~~vi~P~~g~lAcg~~G--~Grm~ep~~I~~~i~~~l~~ 199 (209)
T PLN02496 132 SKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVTKRLACGDYG--NGAMAEPSLIYSTVRLFLES 199 (209)
T ss_pred CCCEEEEeCCCHHHHhCHHHHHHHHHHHHCCCEEECCCcCcccCCCcC--CCCCCCHHHHHHHHHHHHhh
Confidence 579999988765554 356677788888999987742 1244432 12334556666666665543
No 374
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.66 E-value=98 Score=24.14 Aligned_cols=77 Identities=17% Similarity=0.139 Sum_probs=49.3
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeE-EEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRV-TAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~v-ia~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
--||.--||+.++.....++ |.+ .|.+ +++|..-.. . ..++. ..+.+-||.+|||
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpe-N~dl~lcYDY~dl~-----l--dfDfs--------------Ay~hirlvAwSMG 67 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPE-NHDLLLCYDYQDLN-----L--DFDFS--------------AYRHIRLVAWSMG 67 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCC-CCcEEEEeehhhcC-----c--ccchh--------------hhhhhhhhhhhHH
Confidence 36677778888888776655 333 4655 588875221 1 12222 1245678999999
Q ss_pred hHHHHHHhhhCCCccceEEEEecc
Q 024469 89 GVTLALAADKFPHKISVAVFVTAF 112 (267)
Q Consensus 89 G~i~~~~a~~~p~~v~~lvli~~~ 112 (267)
=.++-++.+..+ ++..+.|++.
T Consensus 68 VwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred HHHHHHHHhhcc--ccceeeecCC
Confidence 999888876653 5566777753
No 375
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=27.21 E-value=1.3e+02 Score=27.53 Aligned_cols=44 Identities=20% Similarity=0.116 Sum_probs=23.8
Q ss_pred eEEEeCCCCCCCCCCCC---Cccc--C-hHHhhHHHHHHHHcCCCCCcEEEE
Q 024469 38 RVTAVDLAASGINMKRI---EDVH--T-FHAYSEPLMEVLASLPAEEKVILV 83 (267)
Q Consensus 38 ~via~Dl~G~G~S~~~~---~~~~--~-~~~~~~~l~~~i~~l~~~~~vilv 83 (267)
-+|++| ||||..|.-. .+.+ + .-+.+..|.+.++.. ++-+|++.
T Consensus 192 ~vIvID-pGHGG~DpGA~g~~G~~EKdv~L~iA~~L~~~L~~~-~g~~VvlT 241 (445)
T PRK10431 192 VIIAID-AGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDD-PMFKGVLT 241 (445)
T ss_pred eEEEEe-CCCCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHhC-CCCEEEEe
Confidence 479999 9999876321 1111 1 123455666666654 22345544
No 376
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=27.06 E-value=2e+02 Score=24.77 Aligned_cols=73 Identities=14% Similarity=0.234 Sum_probs=40.9
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcC-CCeEEEeCCC----C--CC----------------CCCCCCCcccChHHhhH
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLA----A--SG----------------INMKRIEDVHTFHAYSE 65 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~-g~~via~Dl~----G--~G----------------~S~~~~~~~~~~~~~~~ 65 (267)
.+.+++|-|-.+++-+ .++..|+.. +..+|..|-. + +| -+-......++..+|.+
T Consensus 3 ~~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~ 80 (307)
T PRK00091 3 KPKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQR 80 (307)
T ss_pred CceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHH
Confidence 4578888888665543 244455432 3456655542 1 11 11111124568888888
Q ss_pred HHHHHHHcC-CCCCcEEEE
Q 024469 66 PLMEVLASL-PAEEKVILV 83 (267)
Q Consensus 66 ~l~~~i~~l-~~~~~vilv 83 (267)
+..+.++.. ..++.++||
T Consensus 81 ~a~~~i~~i~~~gk~pIlv 99 (307)
T PRK00091 81 DALAAIADILARGKLPILV 99 (307)
T ss_pred HHHHHHHHHHhCCCCEEEE
Confidence 888888754 234567887
No 377
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=27.04 E-value=76 Score=27.29 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=21.2
Q ss_pred CCCcEEEEeeChhhHHHHHHhhhCCCcc
Q 024469 76 AEEKVILVGHSLGGVTLALAADKFPHKI 103 (267)
Q Consensus 76 ~~~~vilvGHSmGG~i~~~~a~~~p~~v 103 (267)
+..+-++.|-|.|+.++..++....+.+
T Consensus 95 ~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 95 DLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred CCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3456789999999999988876554444
No 378
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=27.03 E-value=45 Score=29.86 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=28.1
Q ss_pred CCcEEEEeeChhhHHHHHHhhhCCCccceEEE
Q 024469 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVF 108 (267)
Q Consensus 77 ~~~vilvGHSmGG~i~~~~a~~~p~~v~~lvl 108 (267)
..+++++|.+.||+-+-..|.+.|+.|.++.+
T Consensus 118 ~g~~v~~~s~~GGv~iEe~~~~~p~~i~~~~i 149 (392)
T PRK14046 118 SERVRVIASARGGMEIEEIAAKEPEAIIQVVV 149 (392)
T ss_pred CCcEEEEEeCCCCCchHHHhhhChhheEEEEc
Confidence 35899999999999888899999999988765
No 379
>PRK04435 hypothetical protein; Provisional
Probab=26.98 E-value=2.5e+02 Score=21.21 Aligned_cols=77 Identities=19% Similarity=0.197 Sum_probs=48.4
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCC--CCCCCCCCC-CCcccChHHhhHHHHHHHHcCCCCCcEEEEee
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL--AASGINMKR-IEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl--~G~G~S~~~-~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGH 85 (267)
|..+-|.-...+....+..+...+++.+-++..+.. |..|...-. .-+..+.+...++|.+-|+.+.+..++-++|.
T Consensus 67 ~r~vtL~i~l~Dr~GlLs~Il~~IA~~~aNIltI~q~i~~~g~a~vs~tVevs~~~~~L~~Li~~L~~i~gV~~V~i~~~ 146 (147)
T PRK04435 67 GKIITLSLLLEDRSGTLSKVLNVIAEAGGNILTINQSIPLQGRANVTISIDTSSMEGDIDELLEKLRNLDGVEKVELIGM 146 (147)
T ss_pred CcEEEEEEEEecCCCHHHHHHHHHHHcCCCeEEEEEEcCCCCEEEEEEEEEeCChHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 555555555555677899999999998889988754 222311100 01223444566677777777766668888874
No 380
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=26.91 E-value=2.8e+02 Score=25.03 Aligned_cols=38 Identities=18% Similarity=0.124 Sum_probs=27.0
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCC
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS 47 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~ 47 (267)
+++-|++||.+.... ...+...+.+.|..|++-|+..+
T Consensus 266 e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~ 303 (413)
T TIGR02260 266 EKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKV 303 (413)
T ss_pred cceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEecccc
Confidence 478999999886543 23344455677889999987754
No 381
>PRK07206 hypothetical protein; Provisional
Probab=26.73 E-value=3.3e+02 Score=24.25 Aligned_cols=80 Identities=21% Similarity=0.152 Sum_probs=44.0
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCC---C-CCCC-C--cccChHHhhHHHHHHHHcCCCCCcEEE
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGI---N-MKRI-E--DVHTFHAYSEPLMEVLASLPAEEKVIL 82 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~---S-~~~~-~--~~~~~~~~~~~l~~~i~~l~~~~~vil 82 (267)
+.|++|-|...+. .+++.+++.||+++++|-.+.-. + .... + ..... ...+.+.++++.. . -..++
T Consensus 3 k~~liv~~~~~~~----~~~~a~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~l~~~~~~~-~-~d~vi 75 (416)
T PRK07206 3 KKVVIVDPFSSGK----FLAPAFKKRGIEPIAVTSSCLLDPYYYASFDTSDFIEVIIN-GDIDDLVEFLRKL-G-PEAII 75 (416)
T ss_pred CeEEEEcCCchHH----HHHHHHHHcCCeEEEEEcCCCCchhhhcccCcccchhhhcC-CCHHHHHHHHHHc-C-CCEEE
Confidence 5788888864432 46777888899999887443110 0 0000 0 00011 2355677777766 2 35677
Q ss_pred EeeChhhHHHHHHh
Q 024469 83 VGHSLGGVTLALAA 96 (267)
Q Consensus 83 vGHSmGG~i~~~~a 96 (267)
-|...+=.++..++
T Consensus 76 ~~~e~~~~~~a~l~ 89 (416)
T PRK07206 76 AGAESGVELADRLA 89 (416)
T ss_pred ECCCccHHHHHHHH
Confidence 77665444444444
No 382
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=26.50 E-value=77 Score=25.01 Aligned_cols=30 Identities=33% Similarity=0.440 Sum_probs=19.5
Q ss_pred EEecCCCCChhchHHHHHHHhcCCCeEEEeCCC
Q 024469 13 VLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (267)
Q Consensus 13 vlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~ 45 (267)
|.|.|.|.=+.. .+-.|++.||+|+.+|.-
T Consensus 3 I~ViGlGyvGl~---~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 3 IAVIGLGYVGLP---LAAALAEKGHQVIGVDID 32 (185)
T ss_dssp EEEE--STTHHH---HHHHHHHTTSEEEEE-S-
T ss_pred EEEECCCcchHH---HHHHHHhCCCEEEEEeCC
Confidence 456677766654 366788899999999964
No 383
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=26.16 E-value=51 Score=28.14 Aligned_cols=15 Identities=33% Similarity=0.401 Sum_probs=12.5
Q ss_pred CCeEEEeCCCCCCCCC
Q 024469 36 GHRVTAVDLAASGINM 51 (267)
Q Consensus 36 g~~via~Dl~G~G~S~ 51 (267)
+-++|++| ||||..|
T Consensus 55 ~~~~IvID-pGHGG~D 69 (287)
T PRK10319 55 GKRVVMLD-PGHGGID 69 (287)
T ss_pred CCeEEEEE-CCCCCCC
Confidence 34799999 9999866
No 384
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=25.74 E-value=75 Score=24.28 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=23.4
Q ss_pred cCCccceEEEecCCCCChhchHHHHHHHhcCCCeE
Q 024469 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRV 39 (267)
Q Consensus 5 ~~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~v 39 (267)
.|...+|+||.+|.+..+ +..++..|.+.|.++
T Consensus 37 ~~~~~~pLVCt~G~p~~A--~~~LL~~L~~~g~~l 69 (152)
T PF09664_consen 37 LGASCPPLVCTSGQPSAA--ARRLLDRLAAAGARL 69 (152)
T ss_pred cCCCCCeEEEcCCcHHHH--HHHHHHHHHhCCCEE
Confidence 344578999999997444 446777887777655
No 385
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=25.72 E-value=1.3e+02 Score=29.51 Aligned_cols=21 Identities=29% Similarity=0.335 Sum_probs=16.9
Q ss_pred CCcEEEEeeChhhHHHHHHhh
Q 024469 77 EEKVILVGHSLGGVTLALAAD 97 (267)
Q Consensus 77 ~~~vilvGHSmGG~i~~~~a~ 97 (267)
..--++.|.|+||+++..+|.
T Consensus 65 ~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 65 VRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCceEEeeCHHHHHHHHHHc
Confidence 345788999999998877764
No 386
>PF06956 RtcR: Regulator of RNA terminal phosphate cyclase; InterPro: IPR009715 RtcR is a sigma54-dependent enhancer binding protein [] that activates transcription of the rtcBA operon. The product of the rtcA gene is an RNA 3 -terminal phosphate cyclase []. This domain is found at the N terminus of the RtcR sequence. RtcR, and other sigma54-dependent activators, contain IPR002078 from INTERPRO in the central region of the protein sequence.
Probab=25.57 E-value=1.8e+02 Score=22.90 Aligned_cols=52 Identities=25% Similarity=0.282 Sum_probs=33.2
Q ss_pred EEEeCCCccCChHHHHHHHHcCCCCeEEEecCCCCCCCCCCc---HHHHHHHHHHHHhhC
Q 024469 211 YLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDP---QKLCDCLSQISLKYA 267 (267)
Q Consensus 211 ~i~g~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p---~~~~~~l~~f~~~~~ 267 (267)
+++..++.-+-....+.+....|.+++.. |-+.+.+| +++-..+.+|+..|.
T Consensus 45 Ll~~~~~~~LA~~v~~Di~~vSP~TeV~~-----~~v~l~dPWDfeeVY~~l~dfa~~Y~ 99 (183)
T PF06956_consen 45 LLHDPRYRALAEQVRRDIAQVSPETEVRL-----HEVELADPWDFEEVYAALHDFARGYP 99 (183)
T ss_pred EEecCcHHHHHHHHHHHHHhcCCCCEEEE-----EEeccCCCccHHHHHHHHHHHHhhCC
Confidence 34455555555555556667778887643 33557777 666677888888763
No 387
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=25.38 E-value=75 Score=25.61 Aligned_cols=21 Identities=5% Similarity=0.283 Sum_probs=15.0
Q ss_pred HHHHHHcCCCCCcEEEEeeChh
Q 024469 67 LMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmG 88 (267)
+.+++... ..+.+.||||+=|
T Consensus 142 i~~~i~~~-~~~tVLIVGHnp~ 162 (201)
T PRK15416 142 IKDLQRKS-PDKNIVIFTHNHC 162 (201)
T ss_pred HHHHHHhC-CCCEEEEEeCchh
Confidence 36666666 3368999999854
No 388
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=25.25 E-value=78 Score=27.39 Aligned_cols=57 Identities=18% Similarity=0.196 Sum_probs=33.1
Q ss_pred HHHHHhcCCCeEEEeCCCCCCCCCCCC----CcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 28 LKARLVAGGHRVTAVDLAASGINMKRI----EDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 28 ~~~~L~~~g~~via~Dl~G~G~S~~~~----~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
+++.|.++|+++..+. ||+|.+.+.. .+..+.++..|+-.-+.+.. .-+++||=.==
T Consensus 50 La~~l~~~G~~~~IlS-RGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~---~~~V~V~~dR~ 110 (311)
T TIGR00682 50 LAELLKDRGLRVGVLS-RGYGSKTKKYTLVGSKKHTASEVGDEPVLLAKYL---HATVVASKDRK 110 (311)
T ss_pred HHHHHHHCCCEEEEEC-CCCCCCCCCCeeeeCCCCChHHcCcHHHHhhhhc---CCcEEEeChHH
Confidence 7888888999998887 7999754211 11224445555544433332 23456665543
No 389
>TIGR03586 PseI pseudaminic acid synthase.
Probab=24.79 E-value=3.9e+02 Score=23.33 Aligned_cols=79 Identities=14% Similarity=0.046 Sum_probs=46.3
Q ss_pred ccCCccceEEEecCCCCChhchHHHHHHHhcCCC-eEEEeCCCCCCCCCCCC-CcccChHHhhHHHHHHHHcCCCCCcEE
Q 024469 4 VVGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGH-RVTAVDLAASGINMKRI-EDVHTFHAYSEPLMEVLASLPAEEKVI 81 (267)
Q Consensus 4 ~~~~~~~~ivlvHG~~~~~~~w~~~~~~L~~~g~-~via~Dl~G~G~S~~~~-~~~~~~~~~~~~l~~~i~~l~~~~~vi 81 (267)
.+++.|+||+|==|. ++-..|..-++.+.+.|. +++.+. +.|.-+. ....++. .+..++..-. -+|-
T Consensus 129 ~va~~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~Llh----C~s~YP~~~~~~nL~-----~i~~lk~~f~-~pVG 197 (327)
T TIGR03586 129 YVAKTGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLK----CTSSYPAPLEDANLR-----TIPDLAERFN-VPVG 197 (327)
T ss_pred HHHhcCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEe----cCCCCCCCcccCCHH-----HHHHHHHHhC-CCEE
Confidence 356678999999999 477788888888877665 454433 2233221 1111222 2233343312 4676
Q ss_pred EEeeChhhHHHH
Q 024469 82 LVGHSLGGVTLA 93 (267)
Q Consensus 82 lvGHSmGG~i~~ 93 (267)
+..||.|=.+..
T Consensus 198 ~SDHt~G~~~~~ 209 (327)
T TIGR03586 198 LSDHTLGILAPV 209 (327)
T ss_pred eeCCCCchHHHH
Confidence 889999865433
No 390
>PLN02748 tRNA dimethylallyltransferase
Probab=24.61 E-value=2.6e+02 Score=25.82 Aligned_cols=75 Identities=12% Similarity=0.155 Sum_probs=44.9
Q ss_pred ceEEEecCCCCChhchHHHHHHHhcC-CCeEEEeC----CCCCCC-CC-----------------CCCCcccChHHhhHH
Q 024469 10 KHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVD----LAASGI-NM-----------------KRIEDVHTFHAYSEP 66 (267)
Q Consensus 10 ~~ivlvHG~~~~~~~w~~~~~~L~~~-g~~via~D----l~G~G~-S~-----------------~~~~~~~~~~~~~~~ 66 (267)
+.+|+|-|-.+++-+= ++-.|+.. +..+|..| ++|.-- +. ..++..|++.+|.++
T Consensus 22 ~~~i~i~GptgsGKs~--la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F~~~ 99 (468)
T PLN02748 22 AKVVVVMGPTGSGKSK--LAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDFRDH 99 (468)
T ss_pred CCEEEEECCCCCCHHH--HHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHHHHH
Confidence 5688999886555432 33344332 34677776 223110 11 112356899999999
Q ss_pred HHHHHHcC-CCCCcEEEEeeC
Q 024469 67 LMEVLASL-PAEEKVILVGHS 86 (267)
Q Consensus 67 l~~~i~~l-~~~~~vilvGHS 86 (267)
....|+.+ ..++-+||||=|
T Consensus 100 A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 100 AVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHhcCCCeEEEcCh
Confidence 88888876 234678998744
No 391
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=24.22 E-value=4.8e+02 Score=22.69 Aligned_cols=41 Identities=32% Similarity=0.359 Sum_probs=28.2
Q ss_pred cceEEEecCCCCChh--chHHHHHHHhcCCCeE--EEeCCCCCCCC
Q 024469 9 EKHFVLVHGVNHGAW--CWYKLKARLVAGGHRV--TAVDLAASGIN 50 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~--~w~~~~~~L~~~g~~v--ia~Dl~G~G~S 50 (267)
...+|=|-|.+..+- .=..+...|.++|++| +|+| |..-.|
T Consensus 50 ~a~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVD-PSSp~T 94 (323)
T COG1703 50 NAHVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVD-PSSPFT 94 (323)
T ss_pred CCcEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEEC-CCCCCC
Confidence 456888888864432 3467888888889866 7899 654443
No 392
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=23.98 E-value=1.2e+02 Score=24.93 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=22.5
Q ss_pred HHHHHHcCCCCC-cEEEEeeChhhHHHHHHhhhCC
Q 024469 67 LMEVLASLPAEE-KVILVGHSLGGVTLALAADKFP 100 (267)
Q Consensus 67 l~~~i~~l~~~~-~vilvGHSmGG~i~~~~a~~~p 100 (267)
+.+.+.+.+... ...++|=|.|++++..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 444444443221 3479999999999888876554
No 393
>PTZ00445 p36-lilke protein; Provisional
Probab=23.95 E-value=1.7e+02 Score=23.90 Aligned_cols=64 Identities=19% Similarity=0.136 Sum_probs=34.9
Q ss_pred hHHHHHHHhcCCCeEEEeCCCC-----C-CCCCCCC-CcccChHHhhHHHHHHHHcCC-CCCcEEEEeeChh
Q 024469 25 WYKLKARLVAGGHRVTAVDLAA-----S-GINMKRI-EDVHTFHAYSEPLMEVLASLP-AEEKVILVGHSLG 88 (267)
Q Consensus 25 w~~~~~~L~~~g~~via~Dl~G-----~-G~S~~~~-~~~~~~~~~~~~l~~~i~~l~-~~~~vilvGHSmG 88 (267)
=+.+.+.|.+.|.++++.|+=- | |.-..+. +...=+.....++..+++++. .+=+++||=+|==
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 3457788999999999999853 1 1111111 111111122344555555552 1248999988854
No 394
>cd06144 REX4_like DEDDh 3'-5' exonuclease domain of RNA exonuclease 4, XPMC2, Interferon Stimulated Gene product of 20 kDa, and similar proteins. This subfamily is composed of RNA exonuclease 4 (REX4 or Rex4p), XPMC2, Interferon (IFN) Stimulated Gene product of 20 kDa (ISG20), and similar proteins. REX4 is involved in pre-rRNA processing. It controls the ratio between the two forms of 5.8S rRNA in yeast. XPMC2 is a Xenopus gene which was identified through its ability to correct a mitotic defect in fission yeast. The human homolog of XPMC2 (hPMC2) may be involved in angiotensin II-induced adrenal cell cycle progression and cell proliferation. ISG20 is an IFN-induced antiviral exonuclease with a strong preference for single-stranded RNA and minor activity towards single-stranded DNA. These proteins are DEDDh-type DnaQ-like 3'-5' exonucleases containing three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clus
Probab=23.89 E-value=70 Score=24.16 Aligned_cols=36 Identities=36% Similarity=0.577 Sum_probs=22.8
Q ss_pred CCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 47 SGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 47 ~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
||-++....+..++.+....+.+++. .-+||||..+
T Consensus 51 hGIt~~~v~~a~~~~~~~~~l~~~l~------~~vlVgHn~~ 86 (152)
T cd06144 51 SGIRPEHLKDAPDFEEVQKKVAELLK------GRILVGHALK 86 (152)
T ss_pred CCCCHHHHcCCCCHHHHHHHHHHHhC------CCEEEEcCcH
Confidence 66665433345577777776666652 2478999875
No 395
>PF14252 DUF4347: Domain of unknown function (DUF4347)
Probab=23.86 E-value=2.9e+02 Score=21.39 Aligned_cols=78 Identities=13% Similarity=0.173 Sum_probs=53.7
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCCCCCCCCCC-----CCcccChHHhhHHHHHHHHcCCCCCcEEEE
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKR-----IEDVHTFHAYSEPLMEVLASLPAEEKVILV 83 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~-----~~~~~~~~~~~~~l~~~i~~l~~~~~vilv 83 (267)
+..++++..-- .....+...|+.+ -.+-++.+-+||.+..- .-...++..|.+.+..+=+.+....++.|.
T Consensus 22 ~~~v~~ld~~~---d~~~qI~~~L~~~-~~i~~lhivsHG~~G~l~LG~~~l~~~~L~~~~~~l~~w~~~L~~~~~IlLy 97 (165)
T PF14252_consen 22 GVEVVILDPSR---DGLEQIAQALAGY-QNIDALHIVSHGSPGALQLGNTWLSAETLEQYADELAQWGQALADDGDILLY 97 (165)
T ss_pred CCEEEEEeCCC---chHHHHHHHHhcC-CCCceEEEEcCCCcceEEECCceeCHHHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 33455555433 2366788888653 35778889999976631 112348889999988888888555589999
Q ss_pred eeChhhH
Q 024469 84 GHSLGGV 90 (267)
Q Consensus 84 GHSmGG~ 90 (267)
|...+..
T Consensus 98 GC~vaag 104 (165)
T PF14252_consen 98 GCNVAAG 104 (165)
T ss_pred cCccCcc
Confidence 9888876
No 396
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=23.85 E-value=2.5e+02 Score=21.98 Aligned_cols=36 Identities=11% Similarity=-0.036 Sum_probs=27.0
Q ss_pred cceEEEecCCCCChh---chHHHHHHHhcCCCeEEEeCC
Q 024469 9 EKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDL 44 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~---~w~~~~~~L~~~g~~via~Dl 44 (267)
+.||+++.......| ..+..+..|++.|+.|+-|+-
T Consensus 112 ~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~ 150 (177)
T TIGR02113 112 ETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKE 150 (177)
T ss_pred CCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCc
Confidence 678999886654433 467788889888998887753
No 397
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=23.73 E-value=1.6e+02 Score=27.99 Aligned_cols=95 Identities=20% Similarity=0.196 Sum_probs=44.7
Q ss_pred eEEEecCCCC---Ch---hch-HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC-CCCcEEE
Q 024469 11 HFVLVHGVNH---GA---WCW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVIL 82 (267)
Q Consensus 11 ~ivlvHG~~~---~~---~~w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~vil 82 (267)
.||=+||.+. ++ +-| +.++.+| +..++.+|.-=.=..+.+..-..-+-.|.= ++.=...++ -++++++
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaPFPRaleEv~fAYcW-~inn~allG~TgEriv~ 473 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAPFPRALEEVFFAYCW-AINNCALLGSTGERIVL 473 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCCCCcHHHHHHHHHHH-HhcCHHHhCcccceEEE
Confidence 4677888763 22 222 3334444 578999887321111111100001122221 222222232 2479999
Q ss_pred EeeChhhHHHHHHh---hhCCCcc-ceEEEE
Q 024469 83 VGHSLGGVTLALAA---DKFPHKI-SVAVFV 109 (267)
Q Consensus 83 vGHSmGG~i~~~~a---~~~p~~v-~~lvli 109 (267)
+|-|-||......| .++.-|| ++|++.
T Consensus 474 aGDSAGgNL~~~VaLr~i~~gvRvPDGl~la 504 (880)
T KOG4388|consen 474 AGDSAGGNLCFTVALRAIAYGVRVPDGLMLA 504 (880)
T ss_pred eccCCCcceeehhHHHHHHhCCCCCCceEEe
Confidence 99999997433332 2233344 466654
No 398
>cd06145 REX1_like DEDDh 3'-5' exonuclease domain of RNA exonuclease 1, -3 and similar eukaryotic proteins. This subfamily is composed of RNA exonuclease 1 (REX1 or Rex1p), REX3 (or Rex3p), and similar eukaryotic proteins. In yeast, REX1 and REX3 are required for 5S rRNA and MRP (mitochondrial RNA processing) RNA maturation, respectively. They are DEDDh-type DnaQ-like 3'-5' exonucleases containing three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. REX1 is the major exonuclease responsible for pre-tRNA trail trimming and may also be involved in nuclear CCA turnover. REX proteins function in the processing and maturation of many RNA species, similar to the function of Escherichia coli RNase T.
Probab=23.71 E-value=74 Score=24.04 Aligned_cols=37 Identities=38% Similarity=0.621 Sum_probs=23.8
Q ss_pred CCCCCCCCCcc-cChHHhhHHHHHHHHcCCCCCcEEEEeeChh
Q 024469 47 SGINMKRIEDV-HTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (267)
Q Consensus 47 ~G~S~~~~~~~-~~~~~~~~~l~~~i~~l~~~~~vilvGHSmG 88 (267)
||-++....+. .++.+....+.++++ +..+||||+..
T Consensus 48 tGIt~~~l~~a~~~~~~v~~~~~~fl~-----~~~vlVgHn~~ 85 (150)
T cd06145 48 SGITEEMLENVTTTLEDVQKKLLSLIS-----PDTILVGHSLE 85 (150)
T ss_pred CCCCHHHhccCCCCHHHHHHHHHHHhC-----CCCEEEEcChH
Confidence 67665433343 377777777777663 24689999864
No 399
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=23.48 E-value=4.3e+02 Score=24.22 Aligned_cols=70 Identities=20% Similarity=0.268 Sum_probs=46.5
Q ss_pred HHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHHHhhhCCCc--cceEEE
Q 024469 31 RLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHK--ISVAVF 108 (267)
Q Consensus 31 ~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~~a~~~p~~--v~~lvl 108 (267)
.+...+|.|+-+|=.| +.. -=+++-+++.++-+.+ .-..+++|--||=|--|...|..+.+. |.++|+
T Consensus 177 ~ak~~~~DvvIvDTAG------Rl~---ide~Lm~El~~Ik~~~-~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIl 246 (451)
T COG0541 177 KAKEEGYDVVIVDTAG------RLH---IDEELMDELKEIKEVI-NPDETLLVVDAMIGQDAVNTAKAFNEALGITGVIL 246 (451)
T ss_pred HHHHcCCCEEEEeCCC------ccc---ccHHHHHHHHHHHhhc-CCCeEEEEEecccchHHHHHHHHHhhhcCCceEEE
Confidence 3344566777777433 111 1146667777766666 336899999999998888888887775 578887
Q ss_pred Ee
Q 024469 109 VT 110 (267)
Q Consensus 109 i~ 110 (267)
--
T Consensus 247 TK 248 (451)
T COG0541 247 TK 248 (451)
T ss_pred Ec
Confidence 53
No 400
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=23.39 E-value=3.9e+02 Score=23.31 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=25.5
Q ss_pred ChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHH
Q 024469 59 TFHAYSEPLMEVLASLPAEEKVILVGHSLGGVT 91 (267)
Q Consensus 59 ~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i 91 (267)
+..+.++.|.+.++......+++||=|++=|..
T Consensus 118 ~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 118 SPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 566777778888877632579999999998874
No 401
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=23.34 E-value=1e+02 Score=24.57 Aligned_cols=39 Identities=15% Similarity=0.248 Sum_probs=27.5
Q ss_pred CCCCCCcccChHHhhHHHHHHHHcCC-CCCcEEEEeeChh
Q 024469 50 NMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVILVGHSLG 88 (267)
Q Consensus 50 S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~vilvGHSmG 88 (267)
|..+.++.|+.+.+-..+.++++... ...+++++|.|+=
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~lGDSit 43 (214)
T cd01820 4 APTPVDDLDGDPRWMSRHERFVAEAKQKEPDVVFIGDSIT 43 (214)
T ss_pred CCcCCcccccchhHHHHHHHHHHHhhcCCCCEEEECchHh
Confidence 33455567888888888888887642 2247999999963
No 402
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=23.30 E-value=83 Score=30.42 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=46.0
Q ss_pred ccceEEEecCCCCC----------hhchHHHHHHHhcCCCeEEEeC-C----CCCCCCCCCC-----CcccChHHhhHHH
Q 024469 8 EEKHFVLVHGVNHG----------AWCWYKLKARLVAGGHRVTAVD-L----AASGINMKRI-----EDVHTFHAYSEPL 67 (267)
Q Consensus 8 ~~~~ivlvHG~~~~----------~~~w~~~~~~L~~~g~~via~D-l----~G~G~S~~~~-----~~~~~~~~~~~~l 67 (267)
++-+|++-|..... ...+..++..|+++||++|.+| + .|-+.-+.+. ++-| .+....+
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy--~sny~~A 124 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGY--SSFYRRV 124 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCC--cchHHHH
Confidence 45789999998543 2468889999999999999885 2 2222111111 1222 2344566
Q ss_pred HHHHHcCCCCCcEEEEeeCh
Q 024469 68 MEVLASLPAEEKVILVGHSL 87 (267)
Q Consensus 68 ~~~i~~l~~~~~vilvGHSm 87 (267)
..++++.+--.-+.+||.-+
T Consensus 125 lPILKkyg~pATfFvVg~wi 144 (672)
T PRK14581 125 YPLLKAYKWSAVLAPVGTWI 144 (672)
T ss_pred HHHHHHcCCCEEEEEechhh
Confidence 67777773212345566433
No 403
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=23.28 E-value=97 Score=27.03 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=26.1
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEe
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAV 42 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~ 42 (267)
+.-.|||=|...--.+| ++..|-.+||+|.+-
T Consensus 5 ~~~~VcVTGAsGfIgsw--ivk~LL~rGY~V~gt 36 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSW--IVKLLLSRGYTVRGT 36 (327)
T ss_pred CCcEEEEeCCchHHHHH--HHHHHHhCCCEEEEE
Confidence 45689999998877888 777777899999854
No 404
>PRK03482 phosphoglycerate mutase; Provisional
Probab=22.98 E-value=2.2e+02 Score=22.73 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=21.7
Q ss_pred cChHHhhHHHHHHHHcC---CCCCcEEEEeeChhhHHHH
Q 024469 58 HTFHAYSEPLMEVLASL---PAEEKVILVGHSLGGVTLA 93 (267)
Q Consensus 58 ~~~~~~~~~l~~~i~~l---~~~~~vilvGHSmGG~i~~ 93 (267)
.++.++.+.+.++++.+ ..++++++|+| ||.+-.
T Consensus 120 Es~~~~~~Rv~~~l~~~~~~~~~~~vliVsH--g~~i~~ 156 (215)
T PRK03482 120 ESMQELSDRMHAALESCLELPQGSRPLLVSH--GIALGC 156 (215)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHH
Confidence 36677777776666644 13357999999 455433
No 405
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=22.75 E-value=3e+02 Score=22.08 Aligned_cols=34 Identities=29% Similarity=0.355 Sum_probs=22.3
Q ss_pred cceEEEecCCCCChhchHHHHHHHhcCCCeEEEeCCC
Q 024469 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl~ 45 (267)
++. +||-|...+-... ++..|.++|++|++.+..
T Consensus 8 ~k~-vlItGas~~iG~~--la~~l~~~G~~v~~~~~~ 41 (252)
T PRK08220 8 GKT-VWVTGAAQGIGYA--VALAFVEAGAKVIGFDQA 41 (252)
T ss_pred CCE-EEEeCCCchHHHH--HHHHHHHCCCEEEEEecc
Confidence 344 5555655444333 677787889999999764
No 406
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=22.63 E-value=80 Score=35.68 Aligned_cols=29 Identities=21% Similarity=0.293 Sum_probs=21.9
Q ss_pred HHHHHHcCCCCCcEEEEeeChhhHHHHHHh
Q 024469 67 LMEVLASLPAEEKVILVGHSLGGVTLALAA 96 (267)
Q Consensus 67 l~~~i~~l~~~~~vilvGHSmGG~i~~~~a 96 (267)
+.++++.+ +.++-.++|||+|=..++.+|
T Consensus 664 l~~lL~~~-Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQA-GFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHc-CCccceeecCCHHHHHHHHHh
Confidence 44556666 557889999999998777655
No 407
>TIGR01827 gatC_rel Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase, subunit C, putative. This model represents a family small family related to GatC, the third subunit of an enzyme for completing the charging of tRNA(Gln) by amidating the Glu-tRNA(Gln). The few known archaea that contain a member of this family appear to produce Asn-tRNA(Asn) by an analogous amidotransferase reaction. This protein is proposed to substitute for GatC in the charging of both tRNAs.
Probab=22.50 E-value=1.3e+02 Score=19.87 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=22.3
Q ss_pred CCCccCChHH--HHHHHHcCCCCe--EEEecCCCCCCC
Q 024469 215 EEDIGLPKQF--QHWMIQNYPVNE--VMEIKGGDHMAM 248 (267)
Q Consensus 215 ~~D~~~~~~~--~~~~~~~~p~~~--~~~i~~~gH~~~ 248 (267)
+.|...+... .+.+.++.|..+ ++++| -|||..
T Consensus 37 ReD~~~~s~~~~re~iL~NAP~~edg~F~Vp-~~~~~~ 73 (73)
T TIGR01827 37 REDEEPRCDPEFKKKMLENAPVSDDGYVVVE-RGHWLR 73 (73)
T ss_pred CCCcCCCCcchhHHHHHHcCCcccCCEEEEe-cCccCC
Confidence 5565554443 566778888664 88898 789863
No 408
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=22.43 E-value=1.1e+02 Score=25.84 Aligned_cols=62 Identities=13% Similarity=0.312 Sum_probs=32.6
Q ss_pred HHHHHHhcCCCeEEEeCCCC-CCCCCCCCCcccChHHhhHHHHHHHHcCC-CCCcEEEEeeChhhHH
Q 024469 27 KLKARLVAGGHRVTAVDLAA-SGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVILVGHSLGGVT 91 (267)
Q Consensus 27 ~~~~~L~~~g~~via~Dl~G-~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~vilvGHSmGG~i 91 (267)
..+..+.+.|-.++++.+-- .|.+-. .....|+++.++.+.++.++.. ...+++++.| ||.+
T Consensus 161 e~A~~M~~AGaDiiv~H~GlT~gG~~G-a~~~~sl~~a~~~~~~i~~aa~~v~~dii~l~h--GGPI 224 (268)
T PF09370_consen 161 EQARAMAEAGADIIVAHMGLTTGGSIG-AKTALSLEEAAERIQEIFDAARAVNPDIIVLCH--GGPI 224 (268)
T ss_dssp HHHHHHHHHT-SEEEEE-SS-----------S--HHHHHHHHHHHHHHHHCC-TT-EEEEE--CTTB
T ss_pred HHHHHHHHcCCCEEEecCCccCCCCcC-ccccCCHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCCC
Confidence 35666667788999987632 122211 1134588888877766666442 2357888898 8875
No 409
>PF01715 IPPT: IPP transferase; InterPro: IPR002627 tRNA isopentenyltransferases 2.5.1.8 from EC also known as tRNA delta(2)-isopentenylpyrophosphate transferases or IPP transferases. These enzymes modify both cytoplasmic and mitochondrial tRNAs at A(37) to give isopentenyl A(37) [].; GO: 0005524 ATP binding, 0008033 tRNA processing; PDB: 2ZXU_A 3FOZ_A 2ZM5_B 3D3Q_A 3EXA_B 2QGN_A 3A8T_A 3EPK_B 3EPH_A 3EPJ_A ....
Probab=22.23 E-value=73 Score=26.61 Aligned_cols=31 Identities=16% Similarity=0.280 Sum_probs=20.3
Q ss_pred CcccChHHhhHHHHHHHHcC-CCCCcEEEEee
Q 024469 55 EDVHTFHAYSEPLMEVLASL-PAEEKVILVGH 85 (267)
Q Consensus 55 ~~~~~~~~~~~~l~~~i~~l-~~~~~vilvGH 85 (267)
++.|++.+|.++..+.|+.+ ..++.+||||=
T Consensus 33 ~e~ysv~~f~~~a~~~i~~i~~rgk~PIlvGG 64 (253)
T PF01715_consen 33 DEEYSVGDFQRDAREAIEDILARGKIPILVGG 64 (253)
T ss_dssp TS---HHHHHHHHHHHHHHHHHTT-EEEEEES
T ss_pred cCCCCHHHHHHHHHHHHHHHHhcCCeEEEECC
Confidence 35689999999988888766 23467888863
No 410
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=22.21 E-value=1.8e+02 Score=19.00 Aligned_cols=14 Identities=50% Similarity=0.610 Sum_probs=9.0
Q ss_pred ceEEEecCCC-CChh
Q 024469 10 KHFVLVHGVN-HGAW 23 (267)
Q Consensus 10 ~~ivlvHG~~-~~~~ 23 (267)
+.++||||-. .++.
T Consensus 32 ~~~~lvhGga~~GaD 46 (71)
T PF10686_consen 32 PDMVLVHGGAPKGAD 46 (71)
T ss_pred CCEEEEECCCCCCHH
Confidence 5567777776 5554
No 411
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=22.20 E-value=88 Score=28.85 Aligned_cols=37 Identities=30% Similarity=0.399 Sum_probs=25.0
Q ss_pred HHHHHHHHcCCCC-CcEEEEeeChhhHHHHHHhhh-CCC
Q 024469 65 EPLMEVLASLPAE-EKVILVGHSLGGVTLALAADK-FPH 101 (267)
Q Consensus 65 ~~l~~~i~~l~~~-~~vilvGHSmGG~i~~~~a~~-~p~ 101 (267)
+-|.+-++.|+-. +.+||-|-|||..-|++++.+ .|.
T Consensus 343 ~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 343 NVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred HHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCc
Confidence 3344455556322 479999999999988888544 453
No 412
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=21.66 E-value=2.8e+02 Score=23.08 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=27.6
Q ss_pred ccCCccceEEEecCCCCCh-hchHHHHHHHhcCCC-eEEEeCCC
Q 024469 4 VVGMEEKHFVLVHGVNHGA-WCWYKLKARLVAGGH-RVTAVDLA 45 (267)
Q Consensus 4 ~~~~~~~~ivlvHG~~~~~-~~w~~~~~~L~~~g~-~via~Dl~ 45 (267)
..|.+.+.|++|.-..... ..++...+.|++.|. .|-.+|++
T Consensus 23 lag~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 23 RAGGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred HhCCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 4566567899998654433 345566777777787 45667774
No 413
>PRK12828 short chain dehydrogenase; Provisional
Probab=21.60 E-value=1.2e+02 Score=24.21 Aligned_cols=31 Identities=29% Similarity=0.234 Sum_probs=22.6
Q ss_pred EEEecCCCCChhchHHHHHHHhcCCCeEEEeCC
Q 024469 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL 44 (267)
Q Consensus 12 ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl 44 (267)
.+||.|...+-.. .+++.|.++|++|++.+.
T Consensus 9 ~vlItGatg~iG~--~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGGLGR--ATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCcHhH--HHHHHHHHCCCeEEEEeC
Confidence 4788887654443 366777778999999985
No 414
>CHL00194 ycf39 Ycf39; Provisional
Probab=21.34 E-value=1.8e+02 Score=24.86 Aligned_cols=20 Identities=10% Similarity=0.122 Sum_probs=15.8
Q ss_pred HHHHHHHhcCCCeEEEeCCC
Q 024469 26 YKLKARLVAGGHRVTAVDLA 45 (267)
Q Consensus 26 ~~~~~~L~~~g~~via~Dl~ 45 (267)
+.+++.|.++||+|++++..
T Consensus 14 ~~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 14 RQIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred HHHHHHHHHCCCeEEEEEcC
Confidence 34788888889999999754
No 415
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=21.29 E-value=68 Score=18.52 Aligned_cols=9 Identities=44% Similarity=0.962 Sum_probs=7.6
Q ss_pred cceEEEecC
Q 024469 9 EKHFVLVHG 17 (267)
Q Consensus 9 ~~~ivlvHG 17 (267)
.+.|+++||
T Consensus 32 p~~vilVHG 40 (43)
T PF07521_consen 32 PRKVILVHG 40 (43)
T ss_dssp SSEEEEESS
T ss_pred CCEEEEecC
Confidence 368999999
No 416
>PRK09330 cell division protein FtsZ; Validated
Probab=21.28 E-value=1.5e+02 Score=26.53 Aligned_cols=16 Identities=19% Similarity=0.484 Sum_probs=12.5
Q ss_pred CCCcEEEEeeChhhHH
Q 024469 76 AEEKVILVGHSLGGVT 91 (267)
Q Consensus 76 ~~~~vilvGHSmGG~i 91 (267)
...+.++|=|+|||..
T Consensus 96 ~~~D~vfI~AGmGGGT 111 (384)
T PRK09330 96 EGADMVFITAGMGGGT 111 (384)
T ss_pred cCCCEEEEEecCCCcc
Confidence 3468889999999753
No 417
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=21.19 E-value=96 Score=22.64 Aligned_cols=23 Identities=26% Similarity=0.378 Sum_probs=19.9
Q ss_pred hchHHHHHHHhcCCCeEEEeCCC
Q 024469 23 WCWYKLKARLVAGGHRVTAVDLA 45 (267)
Q Consensus 23 ~~w~~~~~~L~~~g~~via~Dl~ 45 (267)
..+-.++..|+++|+.|++.|.-
T Consensus 23 G~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 23 GFFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred chHHHHHHHHHHcCCcEEEEecc
Confidence 35677999999999999999975
No 418
>PRK09072 short chain dehydrogenase; Provisional
Probab=20.87 E-value=1.4e+02 Score=24.40 Aligned_cols=32 Identities=31% Similarity=0.348 Sum_probs=23.5
Q ss_pred eEEEecCCCCChhchHHHHHHHhcCCCeEEEeCC
Q 024469 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL 44 (267)
Q Consensus 11 ~ivlvHG~~~~~~~w~~~~~~L~~~g~~via~Dl 44 (267)
..++|.|...+- -+.++..|.++|++|++.+.
T Consensus 6 ~~vlItG~s~~i--G~~ia~~l~~~G~~V~~~~r 37 (263)
T PRK09072 6 KRVLLTGASGGI--GQALAEALAAAGARLLLVGR 37 (263)
T ss_pred CEEEEECCCchH--HHHHHHHHHHCCCEEEEEEC
Confidence 357787776433 34578888889999999985
No 419
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=20.80 E-value=92 Score=27.33 Aligned_cols=77 Identities=16% Similarity=0.093 Sum_probs=41.6
Q ss_pred ceEEEecCCCCChh----chHHHHHHHhcCCCeEEEeCCCCCCCCCCCC---CcccChHHhhHHHHHHHHcCCCCCcEEE
Q 024469 10 KHFVLVHGVNHGAW----CWYKLKARLVAGGHRVTAVDLAASGINMKRI---EDVHTFHAYSEPLMEVLASLPAEEKVIL 82 (267)
Q Consensus 10 ~~ivlvHG~~~~~~----~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~---~~~~~~~~~~~~l~~~i~~l~~~~~vil 82 (267)
-|||.|=...-++. .=..+++.|.++|+++..+. ||+|.+.... ....+-++..|+-.-+.+.. .-+++
T Consensus 56 vPVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlS-RGYg~~~~~~~~v~~~~~~~~~GDEpllla~~~---~~~V~ 131 (338)
T PRK01906 56 VPVVVVGNVTVGGTGKTPTVIALVDALRAAGFTPGVVS-RGYGAKIKHPTAVTPASRASDAGDEPLLIARRT---DAPVW 131 (338)
T ss_pred CCEEEECCccCCCCChHHHHHHHHHHHHHcCCceEEEe-cCCCCCCCCCeEEcCCCChhhhCcHHHHhhhcC---CCeEE
Confidence 36666654432221 11227888888999988887 8998753211 11123344445443333322 23677
Q ss_pred EeeChhhH
Q 024469 83 VGHSLGGV 90 (267)
Q Consensus 83 vGHSmGG~ 90 (267)
||=+==-.
T Consensus 132 V~~dR~~a 139 (338)
T PRK01906 132 VCPDRVAA 139 (338)
T ss_pred EeCcHHHH
Confidence 77776444
No 420
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=20.59 E-value=1.4e+02 Score=24.20 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=21.0
Q ss_pred ccceEEEecCCCCCh-----hchHHHHHHHhcCCCeEEEe
Q 024469 8 EEKHFVLVHGVNHGA-----WCWYKLKARLVAGGHRVTAV 42 (267)
Q Consensus 8 ~~~~ivlvHG~~~~~-----~~w~~~~~~L~~~g~~via~ 42 (267)
+++.|++.+|..... ..|..++..|.+.+++|+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~ 143 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLL 143 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEE
Confidence 356777777876543 34777899998777777643
No 421
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.50 E-value=2e+02 Score=25.40 Aligned_cols=85 Identities=19% Similarity=0.138 Sum_probs=53.5
Q ss_pred cceEEEecCCCCChhch-HHHHHHHhcCCCeEEEeCCCCCCCCCCCCCcccChHHhhHHHHHHHHcCC-CCCcEEEEeeC
Q 024469 9 EKHFVLVHGVNHGAWCW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVILVGHS 86 (267)
Q Consensus 9 ~~~ivlvHG~~~~~~~w-~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~vilvGHS 86 (267)
.+|||++=||.....-| .+...-..+.||.|+-+..|-+-..-.......++.....-+..++.... ...+.++--.|
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 35999999997655555 33455556778999988888653221111122355666677777777662 23467777889
Q ss_pred hhhHHHH
Q 024469 87 LGGVTLA 93 (267)
Q Consensus 87 mGG~i~~ 93 (267)
|||....
T Consensus 118 ~ng~~~~ 124 (350)
T KOG2521|consen 118 GNGVRLM 124 (350)
T ss_pred CCceeeh
Confidence 9997433
No 422
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=20.35 E-value=2.7e+02 Score=23.70 Aligned_cols=72 Identities=22% Similarity=0.243 Sum_probs=40.0
Q ss_pred cCCCeEEEeCCCC--CCCCCCCCCcccChHHhhHHHHHHHHcCCCCCcEEEEeeChhhHHHHH-----HhhhCCCccceE
Q 024469 34 AGGHRVTAVDLAA--SGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLAL-----AADKFPHKISVA 106 (267)
Q Consensus 34 ~~g~~via~Dl~G--~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~vilvGHSmGG~i~~~-----~a~~~p~~v~~l 106 (267)
.+|-|||++=.+= .|.-..+....-++ +.+..+.+.++..+..+++.|+=|+-||.+.+. +..+++.++..+
T Consensus 46 kr~srvI~~Ihrqe~~~~~giPi~~~I~i-~dse~v~raI~~~~~~~~IdLii~TpGG~v~AA~~I~~~l~~~~~~v~v~ 124 (285)
T PF01972_consen 46 KRGSRVITLIHRQERVSFLGIPIYRYIDI-DDSEFVLRAIREAPKDKPIDLIIHTPGGLVDAAEQIARALREHPAKVTVI 124 (285)
T ss_pred HhCCEEEEEEEeccccceeccccceeEcH-hhHHHHHHHHHhcCCCCceEEEEECCCCcHHHHHHHHHHHHhCCCCEEEE
Confidence 4578999886541 11111111111122 345566777776655568899999999985332 234466655443
No 423
>PLN00142 sucrose synthase
Probab=20.27 E-value=1.6e+02 Score=29.35 Aligned_cols=40 Identities=18% Similarity=0.310 Sum_probs=27.0
Q ss_pred hHHhhHHHHHHHHcCCCCCcEEEEee-ChhhHHHHHHhhhC
Q 024469 60 FHAYSEPLMEVLASLPAEEKVILVGH-SLGGVTLALAADKF 99 (267)
Q Consensus 60 ~~~~~~~l~~~i~~l~~~~~vilvGH-SmGG~i~~~~a~~~ 99 (267)
+++|++++.+.+.+..++.+-++.|| ++||.++..++.+.
T Consensus 390 L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l 430 (815)
T PLN00142 390 LETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL 430 (815)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh
Confidence 57788888877743213345556665 78888888888653
No 424
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=20.17 E-value=1.5e+02 Score=22.26 Aligned_cols=28 Identities=21% Similarity=0.277 Sum_probs=18.2
Q ss_pred hHHHHHHHHcCCCCCcEEEEeeChhhHHH
Q 024469 64 SEPLMEVLASLPAEEKVILVGHSLGGVTL 92 (267)
Q Consensus 64 ~~~l~~~i~~l~~~~~vilvGHSmGG~i~ 92 (267)
...|.=.+..+ +.+.++++|||==|++-
T Consensus 42 ~~sle~av~~l-~v~~IiV~gHt~CGa~~ 69 (153)
T PF00484_consen 42 LASLEYAVYHL-GVKEIIVCGHTDCGAIK 69 (153)
T ss_dssp HHHHHHHHHTS-T-SEEEEEEETT-HHHH
T ss_pred hhheeeeeecC-CCCEEEEEcCCCchHHH
Confidence 33444455666 56899999999888754
No 425
>PRK00865 glutamate racemase; Provisional
Probab=20.06 E-value=3e+02 Score=22.92 Aligned_cols=41 Identities=5% Similarity=0.062 Sum_probs=31.3
Q ss_pred HHHHHHHHcCCCCeEEEecCCCCCCCCCCc-HHHHHHHHHHH
Q 024469 223 QFQHWMIQNYPVNEVMEIKGGDHMAMLSDP-QKLCDCLSQIS 263 (267)
Q Consensus 223 ~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p-~~~~~~l~~f~ 263 (267)
...+++.+..|+.+++.+-+..|+|.-+++ +++.+.+.+.+
T Consensus 19 tvl~~i~~~lp~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~ 60 (261)
T PRK00865 19 TVLREIRRLLPDEHIIYVGDTARFPYGEKSEEEIRERTLEIV 60 (261)
T ss_pred HHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHH
Confidence 456677888999999999889999999988 55555554443
Done!