Query 024472
Match_columns 267
No_of_seqs 132 out of 1003
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 04:50:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024472.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024472hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02689 Bifunctional isoaspar 100.0 9.7E-80 2.1E-84 571.6 30.2 264 1-264 2-318 (318)
2 PRK10226 isoaspartyl peptidase 100.0 1.6E-78 3.5E-83 562.4 30.6 265 1-265 1-313 (313)
3 cd04701 Asparaginase_2 L-Aspar 100.0 1.4E-76 3E-81 536.6 28.7 247 3-255 1-259 (260)
4 cd04702 ASRGL1_like ASRGL1_lik 100.0 2.6E-76 5.7E-81 533.4 28.9 248 3-263 2-261 (261)
5 cd04512 Ntn_Asparaginase_2_lik 100.0 1.6E-74 3.4E-79 519.7 26.6 236 4-252 1-248 (248)
6 cd04514 Taspase1_like Taspase1 100.0 1.6E-73 3.4E-78 526.7 28.4 256 4-264 2-287 (303)
7 PF01112 Asparaginase_2: Aspar 100.0 9.3E-74 2E-78 533.4 23.9 257 1-258 1-308 (319)
8 COG1446 Asparaginase [Amino ac 100.0 2.7E-73 5.9E-78 518.8 24.9 258 1-263 2-307 (307)
9 cd04703 Asparaginase_2_like A 100.0 2.1E-72 4.5E-77 505.1 23.8 234 3-251 1-245 (246)
10 PLN02937 Putative isoaspartyl 100.0 2.3E-71 4.9E-76 530.7 29.7 260 3-266 12-391 (414)
11 KOG1592 Asparaginase [Amino ac 100.0 1.3E-70 2.8E-75 500.3 23.4 260 3-266 4-325 (326)
12 cd04513 Glycosylasparaginase G 100.0 1.3E-65 2.8E-70 465.7 25.3 216 31-250 9-261 (263)
13 KOG1593 Asparaginase [Amino ac 100.0 2.3E-44 4.9E-49 322.8 17.9 222 30-252 36-330 (349)
14 TIGR00066 g_glut_trans gamma-g 84.4 1.4 3.1E-05 44.3 4.8 38 33-70 10-47 (516)
15 COG0405 Ggt Gamma-glutamyltran 83.5 1.7 3.8E-05 44.0 4.9 38 33-70 26-63 (539)
16 PLN02198 glutathione gamma-glu 82.2 2 4.3E-05 43.9 4.8 39 32-70 42-80 (573)
17 PLN02180 gamma-glutamyl transp 82.0 1.7 3.7E-05 45.0 4.3 38 33-70 92-129 (639)
18 PF06267 DUF1028: Family of un 81.6 6.7 0.00014 34.7 7.3 92 134-241 1-94 (190)
19 PRK09615 ggt gamma-glutamyltra 81.3 2 4.4E-05 43.9 4.5 51 32-82 58-114 (581)
20 PLN02180 gamma-glutamyl transp 78.5 10 0.00022 39.3 8.6 82 132-216 418-539 (639)
21 TIGR00066 g_glut_trans gamma-g 78.0 15 0.00032 37.0 9.4 82 132-216 342-454 (516)
22 PF01019 G_glu_transpept: Gamm 77.6 8.5 0.00018 38.6 7.6 83 131-216 324-442 (510)
23 PLN02198 glutathione gamma-glu 72.4 26 0.00057 35.8 9.6 82 132-216 367-490 (573)
24 PF01019 G_glu_transpept: Gamm 67.6 5.8 0.00013 39.7 3.7 47 38-84 1-54 (510)
25 PRK09615 ggt gamma-glutamyltra 64.8 39 0.00085 34.7 9.1 83 132-216 390-512 (581)
26 cd01090 Creatinase Creatine am 61.8 22 0.00047 31.6 5.9 43 21-63 109-151 (228)
27 KOG2410 Gamma-glutamyltransfer 60.1 12 0.00025 38.4 4.2 40 31-70 58-97 (579)
28 PRK07281 methionine aminopepti 57.3 28 0.00061 32.3 6.0 41 22-62 149-189 (286)
29 COG3342 Uncharacterized conser 56.5 62 0.0013 29.9 7.8 90 136-244 4-97 (265)
30 cd01091 CDC68-like Related to 53.3 25 0.00054 31.7 4.9 40 22-61 120-159 (243)
31 TIGR00500 met_pdase_I methioni 50.6 42 0.0009 29.7 5.8 42 22-63 117-158 (247)
32 PF00557 Peptidase_M24: Metall 49.0 26 0.00057 29.8 4.2 42 22-63 103-144 (207)
33 PRK05716 methionine aminopepti 44.7 59 0.0013 28.7 5.9 41 22-62 119-159 (252)
34 PLN02689 Bifunctional isoaspar 44.0 21 0.00045 34.0 2.9 27 133-159 279-305 (318)
35 TIGR02993 ectoine_eutD ectoine 40.7 58 0.0013 31.3 5.6 42 22-63 271-312 (391)
36 PF07433 DUF1513: Protein of u 40.2 51 0.0011 31.2 4.9 58 132-189 216-279 (305)
37 cd04702 ASRGL1_like ASRGL1_lik 40.0 30 0.00064 32.1 3.2 27 132-158 223-249 (261)
38 COG1446 Asparaginase [Amino ac 39.3 31 0.00067 32.7 3.2 27 224-250 174-200 (307)
39 cd01092 APP-like Similar to Pr 39.3 86 0.0019 26.5 5.9 43 21-63 103-145 (208)
40 cd04513 Glycosylasparaginase G 35.7 70 0.0015 29.7 4.9 27 223-249 136-162 (263)
41 PF01112 Asparaginase_2: Aspar 34.3 31 0.00067 32.8 2.5 25 133-157 275-299 (319)
42 PRK12897 methionine aminopepti 33.7 77 0.0017 28.2 4.9 42 22-63 118-159 (248)
43 PF06739 SBBP: Beta-propeller 33.4 74 0.0016 20.4 3.5 24 132-155 12-35 (38)
44 PRK10226 isoaspartyl peptidase 32.9 44 0.00095 31.8 3.2 28 132-159 272-299 (313)
45 cd01086 MetAP1 Methionine Amin 32.7 1.1E+02 0.0024 26.7 5.7 43 21-63 108-150 (238)
46 cd01087 Prolidase Prolidase. E 31.2 1.2E+02 0.0026 26.7 5.6 41 21-61 103-143 (243)
47 TIGR01354 cyt_deam_tetra cytid 31.0 1.2E+02 0.0025 24.6 5.1 37 211-247 4-43 (127)
48 PLN02937 Putative isoaspartyl 30.9 47 0.001 32.8 3.1 25 225-249 228-252 (414)
49 cd04701 Asparaginase_2 L-Aspar 30.8 49 0.0011 30.7 3.1 28 132-159 228-255 (260)
50 cd04512 Ntn_Asparaginase_2_lik 30.1 54 0.0012 30.2 3.2 27 131-157 219-245 (248)
51 cd01089 PA2G4-like Related to 30.0 1.5E+02 0.0032 26.0 6.0 40 23-62 122-161 (228)
52 cd01066 APP_MetAP A family inc 29.4 1.8E+02 0.004 23.8 6.2 42 22-63 103-144 (207)
53 cd04703 Asparaginase_2_like A 28.1 48 0.001 30.5 2.5 26 131-157 218-243 (246)
54 PRK12318 methionine aminopepti 28.0 1.7E+02 0.0036 27.1 6.2 42 22-63 159-200 (291)
55 cd01088 MetAP2 Methionine Amin 26.7 1.7E+02 0.0036 27.0 5.9 41 22-62 101-141 (291)
56 PLN02402 cytidine deaminase 26.2 1.8E+02 0.004 27.6 6.1 53 196-248 10-69 (303)
57 PF08988 DUF1895: Protein of u 25.7 2.2E+02 0.0049 20.9 5.3 39 22-60 15-62 (68)
58 PRK14575 putative peptidase; P 25.2 1.7E+02 0.0037 28.3 5.9 43 21-63 285-327 (406)
59 PRK05578 cytidine deaminase; V 25.2 1.5E+02 0.0033 24.3 4.8 38 212-249 8-48 (131)
60 PRK15173 peptidase; Provisiona 25.0 1.7E+02 0.0038 27.3 5.8 42 22-63 203-244 (323)
61 COG1698 Uncharacterized protei 24.9 1.3E+02 0.0029 23.5 4.1 32 28-60 33-66 (93)
62 PRK12896 methionine aminopepti 24.9 1.9E+02 0.004 25.5 5.8 42 22-63 124-165 (255)
63 TIGR00501 met_pdase_II methion 23.8 2.1E+02 0.0045 26.5 6.0 39 24-62 107-145 (295)
64 cd04514 Taspase1_like Taspase1 22.5 85 0.0018 29.7 3.1 36 213-249 129-164 (303)
65 PRK12411 cytidine deaminase; P 22.0 1.8E+02 0.0038 24.0 4.6 39 211-249 7-48 (132)
66 PRK08671 methionine aminopepti 20.2 3.2E+02 0.007 25.1 6.5 41 22-62 102-142 (291)
67 PRK06848 hypothetical protein; 20.1 2E+02 0.0043 23.9 4.6 38 212-249 12-51 (139)
No 1
>PLN02689 Bifunctional isoaspartyl peptidase/L-asparaginase
Probab=100.00 E-value=9.7e-80 Score=571.63 Aligned_cols=264 Identities=68% Similarity=1.052 Sum_probs=232.7
Q ss_pred CceEEEEEcCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcEEe
Q 024472 1 MGWAIALHGGAGDIPVTMPPERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSVLTNAGTVEM 80 (267)
Q Consensus 1 m~~~l~vHgGAG~~~~~~~~~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~Ve~ 80 (267)
|.|.|+||||||+++..++++..+.|++.|++|++++|++|++|+++||||++||++|||||+|||||||+||+||+|||
T Consensus 2 ~~~~i~vHGGAG~~~~~~~~~~~~~~~~~l~~al~~g~~~L~~g~saldAV~~av~~lEd~p~fnAG~Gs~~~~dG~vel 81 (318)
T PLN02689 2 GGWAIALHGGAGDIDPNLPRERQEEAEAALRRCLDLGIAALRSSLPALDVVELVVRELENDPLFNAGRGSVLTEDGTVEM 81 (318)
T ss_pred CceEEEEEcCCCCCccccCHhHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCccCcCCCCCCCEEE
Confidence 46999999999998755666788899999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCCCccc-------ccCH-HHHHHHHH-------------hcc---------ccCCCCcchh--hhhh------
Q 024472 81 EACIMDGNTKRWG-------VWHP-SLALIALA-------------EHE---------IDYSQPIQKD--VEKE------ 122 (267)
Q Consensus 81 DA~iM~G~~~~~G-------i~nP-~~Ar~~la-------------~~~---------~~~~~p~~~~--~~~~------ 122 (267)
||+||||+++++| |||| +|||+||. +|. +++++.+.+. ++..
T Consensus 82 DA~iMdG~~~~~GAV~~v~~vknPI~vAr~Vme~t~H~lLvG~GA~~fA~~~G~~~~~~~~l~t~~~~~~~~~~~~~~~~ 161 (318)
T PLN02689 82 EASIMDGRTRRCGAVSGLTTVVNPISLARLVMEKTPHIYLAFDGAEAFARQQGVETVDNSYFITEENVERLKQAKEANSV 161 (318)
T ss_pred EeEEEeCCCCceEEEeecCCCCCHHHHHHHHHccCCCEEEEChHHHHHHHHcCCCcCCcccccCHHHHHHHHHHHHhccc
Confidence 9999999999998 9999 99999982 222 2233322111 1100
Q ss_pred -----cccC----------CCCCCCCceEEEEEcCCCCeEEEeccCCCccccccccCCCCccccceEecCceeEeecCch
Q 024472 123 -----LPAA----------SGGSQLGTVGCVAVDNQGNLAAATSTGGLVNKMVGRIGDTPIIGSGTYANNLCAVSATGKG 187 (267)
Q Consensus 123 -----~~~~----------~~~~~~dTVGaVa~D~~G~iaaatSTGG~~~K~~GRVGdspi~GaG~ya~~~~a~s~TG~G 187 (267)
.+.. .....+||||+||+|.+|++|++|||||+++|+|||||||||||||+|||+.+||||||+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaValD~~G~lAaaTSTGG~~~K~pGRVGDSpiiGaG~yAd~~~Avs~TG~G 241 (318)
T PLN02689 162 QFDYRIPLDKPAKAAALAADGDAQPETVGCVAVDSDGNCAAATSTGGLVNKMVGRIGDTPIIGAGTYANHLCAVSATGKG 241 (318)
T ss_pred ccccccCCCcccccccccccCCCCCCcEEEEEEeCCCCEEEEECCCCccCCCCcccCCCcccCCchhccCCcEEeeecch
Confidence 0100 0112579999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCceEEEEecCCccEEEeecCCCceeEEEecCCeeEEEEec
Q 024472 188 EAIIRHTVARDVAAVMEFKGLSLKEASAYVVEECVPRGNVGLIAVSASGEVTMPFNTTGMFRACATEDGYSQIGIWT 264 (267)
Q Consensus 188 E~iir~~lA~~i~~~~~~~g~~~~eA~~~~i~~~~~~~~~GvI~v~~~G~~~~~~nt~~m~~a~~~~d~~~~~~~~~ 264 (267)
|.|||+++|++|+++|+++|++|+||++.+|++.++.+.+|+|+||++|+++++|||++|+|||++.++.+++.+|.
T Consensus 242 E~iir~~~A~~v~~~m~~~g~s~~~A~~~~i~~~~~~~~gG~Iavd~~G~~~~~~nt~~m~~a~~~~~g~~~~~~~~ 318 (318)
T PLN02689 242 EAIIRGTVARDVAAVMEYKGLPLQEAVDYVIKERLPEGPAGLIAVSATGEVAMAFNTTGMFRACATEDGFMEVGIWP 318 (318)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhCcCCceEEEEEcCCccEEEEeCCcCeEEEEEeCCCceEEeecC
Confidence 99999999999999998789999999999998766668999999999999999999999999999999999998874
No 2
>PRK10226 isoaspartyl peptidase; Provisional
Probab=100.00 E-value=1.6e-78 Score=562.43 Aligned_cols=265 Identities=43% Similarity=0.646 Sum_probs=229.6
Q ss_pred Cc-eEEEEEcCCCCCCCC-CCccchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcE
Q 024472 1 MG-WAIALHGGAGDIPVT-MPPERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSVLTNAGTV 78 (267)
Q Consensus 1 m~-~~l~vHgGAG~~~~~-~~~~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~V 78 (267)
|. |+|+||||||++++. ++++..++|++.|++|++++|++|++|++++|||++||+.|||||+|||||||+||.||+|
T Consensus 1 ~~~~~i~vHGGAG~~~~~~~~~~~~~~~~~~l~~al~~g~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~dG~v 80 (313)
T PRK10226 1 MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETH 80 (313)
T ss_pred CCCCEEEEECCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCCcE
Confidence 45 789999999999765 5667888999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeEEEecCCCccc-------ccCH-HHHHHHHH-------------hcc---------ccCCCCcchhhhhh---c--
Q 024472 79 EMEACIMDGNTKRWG-------VWHP-SLALIALA-------------EHE---------IDYSQPIQKDVEKE---L-- 123 (267)
Q Consensus 79 e~DA~iM~G~~~~~G-------i~nP-~~Ar~~la-------------~~~---------~~~~~p~~~~~~~~---~-- 123 (267)
||||+||||+++++| |||| ++||++|. +|. ++++.++.+..+.. .
T Consensus 81 elDAsiMdG~t~~~GAV~~l~~vknPi~vAr~vme~t~hv~LvG~gA~~fA~~~G~~~~~~~~l~t~~~~~~~~~~~~~~ 160 (313)
T PRK10226 81 ELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMIGEGAENFAFAHGMERVSPEIFSTPLRYEQLLAARAEG 160 (313)
T ss_pred EEEeEEEeCCCCceeEEEecCCCCCHHHHHHHHHhcCCCeEEEcHHHHHHHHHcCCCcCCcccccCHHHHHHHHHHHhhc
Confidence 999999999999999 9999 99999982 222 22333322111100 0
Q ss_pred ---c-----cCCCCCCCCceEEEEEcCCCCeEEEeccCCCccccccccCCCCccccceEecC-ceeEeecCchHHHHHHh
Q 024472 124 ---P-----AASGGSQLGTVGCVAVDNQGNLAAATSTGGLVNKMVGRIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHT 194 (267)
Q Consensus 124 ---~-----~~~~~~~~dTVGaVa~D~~G~iaaatSTGG~~~K~~GRVGdspi~GaG~ya~~-~~a~s~TG~GE~iir~~ 194 (267)
. .......+||||+|++|.+||+|++|||||+++|+|||||||||||||+|||+ .+||||||+||+|||++
T Consensus 161 ~~~~~~~~~~~~~~~~~dTVGaValD~~G~lAaaTSTGG~~~K~pGRVGDSpi~GAG~yAd~~~~A~s~TG~GE~iir~~ 240 (313)
T PRK10226 161 ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRAL 240 (313)
T ss_pred ccccccccCccccCCCCCCEEEEEEeCCCCEEEEECCCCccCCCCCccCCCCCcCCeeeecCCceEEEeeccHHHHHHHh
Confidence 0 00112357999999999999999999999999999999999999999999986 59999999999999999
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHHHHhcC--CCCceEEEEecCCccEEEeecCCCceeEEEecCCeeEEEEecC
Q 024472 195 VARDVAAVMEFKGLSLKEASAYVVEECV--PRGNVGLIAVSASGEVTMPFNTTGMFRACATEDGYSQIGIWTS 265 (267)
Q Consensus 195 lA~~i~~~~~~~g~~~~eA~~~~i~~~~--~~~~~GvI~v~~~G~~~~~~nt~~m~~a~~~~d~~~~~~~~~~ 265 (267)
+|++|+++|++.|++|+||++.+|.+.. ..+.+|+|+||++|+++++|||++|+|+|.+.++.+++.+|.+
T Consensus 241 ~A~~v~~~m~~gg~~~~~A~~~~i~~~~~~~gg~gG~Iavd~~G~~~~~~nt~~M~~~~~~~~g~~~~~~~~~ 313 (313)
T PRK10226 241 AAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYRE 313 (313)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCceEEEEEcCCCCEEEEeCCcccceEEEeCCCcEEEeecCC
Confidence 9999999998546999999999997543 2568999999999999999999999999999999999998864
No 3
>cd04701 Asparaginase_2 L-Asparaginase type 2. L-Asparaginase hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzyme undergoes an autoproteolytic cleavage into alpha and beta subunits to expose a threonine residue which becomes the N-terminal residue of the beta subunit. The threonine residue plays a central role in hydrolase activity. Some asparaginases can also hydrolyze L-glutamine and are termed glutaminase-asparaginase. This is a member of the Ntn-hydrolase superfamily.
Probab=100.00 E-value=1.4e-76 Score=536.61 Aligned_cols=247 Identities=52% Similarity=0.737 Sum_probs=216.5
Q ss_pred eEEEEEcCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcEEeee
Q 024472 3 WAIALHGGAGDIPVTMPPERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSVLTNAGTVEMEA 82 (267)
Q Consensus 3 ~~l~vHgGAG~~~~~~~~~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~Ve~DA 82 (267)
|+|+||||||+++++..++..++|++.|++|++++|++|++|+||||||++||+.|||||+|||||||+||++|+|||||
T Consensus 1 p~livHgGAG~~~~~~~~~~~~~~~~~l~~al~~~~~~L~~g~saldAv~~av~~lEd~p~fNaG~Gs~ln~~G~velDA 80 (260)
T cd04701 1 PALAIHGGAGNIPRDTMPPREAAYRAALRAALEAGHAVLAAGGSALDAVVAAVRLLEDSPLFNAGKGAVFTADGTVELDA 80 (260)
T ss_pred CEEEEEeCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCccCcCCCCCCCEEEEe
Confidence 68999999999987521125788999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCccc-------ccCH-HHHHHHHHhccccCCCCc-chhhhhhcccCCCCCCCCceEEEEEcCCCCeEEEeccC
Q 024472 83 CIMDGNTKRWG-------VWHP-SLALIALAEHEIDYSQPI-QKDVEKELPAASGGSQLGTVGCVAVDNQGNLAAATSTG 153 (267)
Q Consensus 83 ~iM~G~~~~~G-------i~nP-~~Ar~~la~~~~~~~~p~-~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iaaatSTG 153 (267)
+||||+++++| |||| ++||++|.+-...++.-. ......+ ...+||||+|++|.+|++|++||||
T Consensus 81 siMdg~~~~~GaV~~v~~v~nPi~vAr~vme~~~h~~LvG~gA~~fA~~------~G~~dTVGavalD~~G~~aaatSTG 154 (260)
T cd04701 81 SIMDGRTLRAGAVAGLRRVKNPILLARAVMEKTPHVLLAGEGAEAFARE------QGKHGTVGAVALDSHGNLAAATSTG 154 (260)
T ss_pred EEEeCCCCceEEEEEcCCCCCHHHHHHHHHhcCCCeEEECHHHHHHHHH------cCCCCcEEEEEEeCCCCEEEEECCC
Confidence 99999999998 9999 999999863322111111 0100001 1257999999999999999999999
Q ss_pred CCccccccccCCCCccccceEecCc-eeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHHHHHhcC--CCCceEEE
Q 024472 154 GLVNKMVGRIGDTPIIGSGTYANNL-CAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAYVVEECV--PRGNVGLI 230 (267)
Q Consensus 154 G~~~K~~GRVGdspi~GaG~ya~~~-~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~~i~~~~--~~~~~GvI 230 (267)
|+++|+|||||||||||||+|||+. +||||||+||+|||+++|++|+++|++.|++|++|++++|.+.. .++++|+|
T Consensus 155 G~~~K~pGRVGDSpi~GaG~yAd~~~~avs~TG~GE~iir~~~A~~v~~~~~~~g~~~~~A~~~~i~~~~~~~~~~~GiI 234 (260)
T cd04701 155 GLTNKRPGRIGDTPIIGAGTYADNWSVAVSCTGTGEYFIRVAAAHDVAARVRYAGLSLADAAEAVIGEVLETLGGDGGLI 234 (260)
T ss_pred cccCCCCCccCCCCCCCceeeecCCcEEEEeecchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCceEEE
Confidence 9999999999999999999999865 99999999999999999999999998558999999999997643 36889999
Q ss_pred EecCCccEEEeecCCCceeEEEecC
Q 024472 231 AVSASGEVTMPFNTTGMFRACATED 255 (267)
Q Consensus 231 ~v~~~G~~~~~~nt~~m~~a~~~~d 255 (267)
++|++|+++++|||++|+|||++++
T Consensus 235 aid~~G~~~~~~nt~~m~~a~~~~~ 259 (260)
T cd04701 235 AVDARGNVAMPFNTGGMYRGWISED 259 (260)
T ss_pred EEcCCccEEEEeCCCccEEEEEcCC
Confidence 9999999999999999999998765
No 4
>cd04702 ASRGL1_like ASRGL1_like domains, a subfamily of the L-Asparaginase type 2-like enzymes. The wider family includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue. ASRGL1, or asparaginase-like 1, has been cloned from mammalian testis cDNA libraries. It has been identified as a sperm antigen that may induce the production of autoantibodies following obstruction of the male reproductive tract, e.g. vasectomy.
Probab=100.00 E-value=2.6e-76 Score=533.42 Aligned_cols=248 Identities=45% Similarity=0.646 Sum_probs=218.6
Q ss_pred eEEEEEcCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcEEeee
Q 024472 3 WAIALHGGAGDIPVTMPPERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSVLTNAGTVEMEA 82 (267)
Q Consensus 3 ~~l~vHgGAG~~~~~~~~~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~Ve~DA 82 (267)
|+|+||||||++++ +..++|++.|++|++++|++|++|++++|||++||++|||||+|||||||+||++|+|||||
T Consensus 2 p~i~vHgGAG~~~~----~~~~~~~~~~~~a~~~~~~~L~~g~saldAv~~av~~lEd~p~fnaG~Gs~~~~~G~velDA 77 (261)
T cd04702 2 PVIIVHGGAGTIPD----ERVAEKIAGVKAAAEAGYKVLEQGGSALDAVEAAVRVMEDDPIFNAGYGSVLNEDGEVEMDA 77 (261)
T ss_pred cEEEEEcCCCCCch----hHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCccCcCCCCCCCEEEEe
Confidence 67999999999876 47889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCccc-------ccCH-HHHHHHHHhccccCCCCc-chhhhhhcccCCCCCCCCceEEEEEcCCCCeEEEeccC
Q 024472 83 CIMDGNTKRWG-------VWHP-SLALIALAEHEIDYSQPI-QKDVEKELPAASGGSQLGTVGCVAVDNQGNLAAATSTG 153 (267)
Q Consensus 83 ~iM~G~~~~~G-------i~nP-~~Ar~~la~~~~~~~~p~-~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iaaatSTG 153 (267)
+||||+++++| |||| ++||++|.+-....+.-. ......+ ..+||||+||+|.+|++|++||||
T Consensus 78 ~iMdG~~~~~GaV~~v~~v~nPi~vAr~vme~t~H~lLvG~gA~~fA~~-------~G~dTVGavalD~~G~laaatSTg 150 (261)
T cd04702 78 SIMDGKTLRAGAVAAVRDIMNPISLARKVMEKTDHVLLVGEGAERFARE-------MGLGTVGAVALDASGNIAAATSTG 150 (261)
T ss_pred EEEeCCCCceEEEEEcCCCCCHHHHHHHHHccCCCEEEEChHHHHHHHH-------cCCCceEEEEEeCCCCEEEEECCC
Confidence 99999999998 9999 999998852111111100 0111111 117999999999999999999999
Q ss_pred CCccccccccCCCCccccceEecC-ceeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHHHHHhcC--CCCceEEE
Q 024472 154 GLVNKMVGRIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAYVVEECV--PRGNVGLI 230 (267)
Q Consensus 154 G~~~K~~GRVGdspi~GaG~ya~~-~~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~~i~~~~--~~~~~GvI 230 (267)
|+++|+|||||||||||||+|||+ .+||||||+||+|||+++|++++++|+ +|++|+||++.+|.+.. .++.+|+|
T Consensus 151 G~~~K~~GRVGDspi~GaG~yAd~~~ga~s~TG~GE~iir~~~a~~v~~~m~-~g~s~~eA~~~~i~~~~~~~~g~gG~I 229 (261)
T cd04702 151 GTTNKLVGRVGDTPLIGCGTYADNKVGAVSTTGHGESIMKVVLARLILDHME-QGGSAQEAADKAIEYMTERVKGTGGAI 229 (261)
T ss_pred CccCCCCCcCCCCCcCCCceeecCCceEEEeeccHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHcCCceEEE
Confidence 999999999999999999999986 699999999999999999999999998 89999999999996532 36889999
Q ss_pred EecCCccEEEeecCCCceeEEEecCCeeEEEEe
Q 024472 231 AVSASGEVTMPFNTTGMFRACATEDGYSQIGIW 263 (267)
Q Consensus 231 ~v~~~G~~~~~~nt~~m~~a~~~~d~~~~~~~~ 263 (267)
++|++|+++++|||+.|+|+|++.+ .+++.++
T Consensus 230 avd~~G~~~~a~nt~~m~~a~~~~~-~~~~~~~ 261 (261)
T cd04702 230 VLDSSGEVGAAFNSKRMAWAYAKDG-QLHYGIV 261 (261)
T ss_pred EEeCCCCEEEEeCCCCceEEEEeCC-eeEEeeC
Confidence 9999999999999999999999766 7777664
No 5
>cd04512 Ntn_Asparaginase_2_like Ntn-hydrolase superfamily, L-Asparaginase type 2-like enzymes. This family includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoprotein. Taspase1 catalyzes the cleavage of the Mix Lineage Leukemia (MLL) nuclear protein and transcription factor TFIIA. L-Asparaginase type 2 hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzymes of this family undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue.
Probab=100.00 E-value=1.6e-74 Score=519.71 Aligned_cols=236 Identities=45% Similarity=0.640 Sum_probs=210.0
Q ss_pred EEEEEcCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcEEeeeE
Q 024472 4 AIALHGGAGDIPVTMPPERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSVLTNAGTVEMEAC 83 (267)
Q Consensus 4 ~l~vHgGAG~~~~~~~~~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~Ve~DA~ 83 (267)
+|+||||||+|++ ..++|++.|++|++++|+.|++|++++|||++||+.|||||+|||||||+||++|+|||||+
T Consensus 1 ~livHgGAG~~~~-----~~~~~~~~l~~a~~~~~~~l~~g~saldAv~~av~~lEd~p~~NaG~Gs~ln~~G~velDAs 75 (248)
T cd04512 1 IVLVHGGAGARPE-----SDKEYKAFLRRAAQEGWKVLQKGGSALDAVEAAVRLLEDSPLFNAGYGSVLNRDGEVEMDAG 75 (248)
T ss_pred CEEEEeCCCCCch-----hHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCCccCcCCCCCCCEEEEeE
Confidence 5899999999986 27889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCccc-------ccCH-HHHHHHHHhccccCCCCc-chhhhhhcccCCCCCCCCceEEEEEcCCCCeEEEeccCC
Q 024472 84 IMDGNTKRWG-------VWHP-SLALIALAEHEIDYSQPI-QKDVEKELPAASGGSQLGTVGCVAVDNQGNLAAATSTGG 154 (267)
Q Consensus 84 iM~G~~~~~G-------i~nP-~~Ar~~la~~~~~~~~p~-~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iaaatSTGG 154 (267)
||||+++++| |||| ++||.+|.+-.+..+.-+ ......+ ..+||||+|++|.+|+++++|||||
T Consensus 76 iMdg~~~~~GaV~~v~~v~nPi~vAr~vme~t~h~~LvG~gA~~fA~~-------~G~dTVGavalD~~G~~aaatSTGG 148 (248)
T cd04512 76 IMDGKSLAFGAVAAIEGIKNPVSVARAVMEKTPHVLLVGEGALEFALD-------HGLDTVGAVALDGQGNLAAATSTGG 148 (248)
T ss_pred EEeCCCCceEEEEEcCCCCCHHHHHHHHHhcCCCeEEEChHHHHHHHH-------hCcCcEEEEEEeCCCCEEEEECCCc
Confidence 9999999988 9999 999998853221111111 0101001 1179999999999999999999999
Q ss_pred CccccccccCCCCccccceEecC-ceeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHHHHHhcC--CCCceEEEE
Q 024472 155 LVNKMVGRIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAYVVEECV--PRGNVGLIA 231 (267)
Q Consensus 155 ~~~K~~GRVGdspi~GaG~ya~~-~~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~~i~~~~--~~~~~GvI~ 231 (267)
+++|+|||||||||||||+|||+ .+||||||+||+|||+++|++|+++|+ +|++|++|++.+|++.. .++.+|+|+
T Consensus 149 ~~~K~pGRVGDspi~GaG~yAd~~~~a~s~TG~GE~iir~~~a~~v~~~~~-~g~~~~~A~~~~i~~~~~~~~~~~G~Ia 227 (248)
T cd04512 149 MSLKLPGRVGDSPIIGAGFYADNEAGAASTTGHGEAIIRTVLARRVVELME-QGMAAQAAAETAVEELGSLKGGQGGVIA 227 (248)
T ss_pred ccCCCCCccCCCCccCceeeecCCcEEEEeeecHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 99999999999999999999986 599999999999999999999999998 79999999999997643 468899999
Q ss_pred ecCCccEEEeecCCCceeEEE
Q 024472 232 VSASGEVTMPFNTTGMFRACA 252 (267)
Q Consensus 232 v~~~G~~~~~~nt~~m~~a~~ 252 (267)
+|++|+++++|||++|+|+|+
T Consensus 228 ~d~~G~~~~a~~~~~m~~a~~ 248 (248)
T cd04512 228 VDSKGEFGAAFNTAGMTVAYH 248 (248)
T ss_pred EeCCCCEEEEECcCCceEEeC
Confidence 999999999999999999984
No 6
>cd04514 Taspase1_like Taspase1_like domains; Taspase1 catalyzes the cleavage of the mix lineage leukemia (MLL) nuclear protein and transcription factor TFIIA. Taspase1 is a threonine aspartase, a member of the Ntn hydrolase superfamily and the type 2 asparaginase family. A threonine residue acts as the active site nucleophile in both endopeptidease and protease activities to cleave polypeptide substrates after an aspartate residue. The Taspase1 proenzyme undergoes autoproteolysis into alpha and beta subunits. The N-terminal residue of the beta subunit is a threonine which is the active catalytic residue. The active enzyme is a heterotetramer.
Probab=100.00 E-value=1.6e-73 Score=526.71 Aligned_cols=256 Identities=34% Similarity=0.437 Sum_probs=218.5
Q ss_pred EEEEEcCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcEEeeeE
Q 024472 4 AIALHGGAGDIPVTMPPERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSVLTNAGTVEMEAC 83 (267)
Q Consensus 4 ~l~vHgGAG~~~~~~~~~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~Ve~DA~ 83 (267)
+|+||||||+|++ ++.+.|++.|++|++++|++|++|++|+|||++||++|||||+|||||||+||+||+|||||+
T Consensus 2 ~iiVHgGAG~~~~----~~~~~~~~~l~~al~~~~~~L~~g~saldAv~~av~~lEd~p~fNaG~Gs~ln~dG~ve~DAs 77 (303)
T cd04514 2 FVAVHAGAGYHSH----SNEKEYKEACKRACQKAIELLRAGGSALDAVVAAIQVLEDSPLTNAGYGSNLTLDGTVECDAS 77 (303)
T ss_pred eEEEEcCCCCCch----hhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCccCcCCCCCCCEEEEeE
Confidence 6999999999987 478899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCccc-------ccCH-HHHHHHHHhc---cccCC-CCcchhh-hhhcccCCCCCCCCceEEEEEcCCCCeEEEe
Q 024472 84 IMDGNTKRWG-------VWHP-SLALIALAEH---EIDYS-QPIQKDV-EKELPAASGGSQLGTVGCVAVDNQGNLAAAT 150 (267)
Q Consensus 84 iM~G~~~~~G-------i~nP-~~Ar~~la~~---~~~~~-~p~~~~~-~~~~~~~~~~~~~dTVGaVa~D~~G~iaaat 150 (267)
||||+++++| |||| ++||.+|.+- ...|. .|..-.. +.-.........+||||+||+|.+|++|++|
T Consensus 78 iMdg~~~~~GaV~~v~~vknPI~lAr~vme~~~~~~~~~g~~~h~~LvG~gA~~fA~~~G~~dTVGaValD~~G~~aaat 157 (303)
T cd04514 78 IMDGKTLRFGAVGAVSGVKNPISLARRLLEEQSKGPLSLGRIPPDFLVGEGARQWAKSHGILDTVGAVCVDKEGNIAAGV 157 (303)
T ss_pred EEeCCCCceEEEEEcCCCCCHHHHHHHHHHhCcccccccCCCCceEEEcHHHHHHHHHhCCCCCEEEEEEeCCCCEEEEE
Confidence 9999999998 9999 9999999621 11111 1210000 0000000011237999999999999999999
Q ss_pred ccCCCccccccccCCCCccccceEecCc-------eeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHHHHHhcC-
Q 024472 151 STGGLVNKMVGRIGDTPIIGSGTYANNL-------CAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAYVVEECV- 222 (267)
Q Consensus 151 STGG~~~K~~GRVGdspi~GaG~ya~~~-------~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~~i~~~~- 222 (267)
||||+++|+|||||||||||||+|||+. +||||||+||+|||+++|++|+++|++.++++++|++..|.+..
T Consensus 158 STGG~~~K~pGRVGDspi~GaG~yAd~~~~~~~~~~a~s~TG~GE~iir~~~A~~v~~~~~~~~~~~~~A~~~~i~~~~~ 237 (303)
T cd04514 158 SSGGIALKHPGRVGQAATYGCGCWASKGDPFTPTSVAVSTSGCGEHLIRTQLARECAERLYLSDCSLEQSLQKSFQEKFF 237 (303)
T ss_pred CCCcccCCCCCccCCcCcCCcEEEeccCCcccCceEEEEeeccHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999753 89999999999999999999999998445699999999997643
Q ss_pred ----CCCceEEEEecC-----CccEEEeecCCCceeEEEecCCeeEEEEec
Q 024472 223 ----PRGNVGLIAVSA-----SGEVTMPFNTTGMFRACATEDGYSQIGIWT 264 (267)
Q Consensus 223 ----~~~~~GvI~v~~-----~G~~~~~~nt~~m~~a~~~~d~~~~~~~~~ 264 (267)
.++++|+|++|+ +|+++|+|||++|+|||+..+ ++++.+=.
T Consensus 238 ~~~~~~~~~G~I~v~~~~~~~~g~~~~~~nt~~M~~a~~~~~-~p~~~~s~ 287 (303)
T cd04514 238 NSPELKKLAGAIVVRAEVKTGNVEILWGHTTPSMCVGYMSGQ-KPKTKISR 287 (303)
T ss_pred cccccCCceEEEEEEeccccCcEEEEEEeCCchheeeEEcCC-CCeeEEec
Confidence 368999999999 999999999999999999877 77766543
No 7
>PF01112 Asparaginase_2: Asparaginase; InterPro: IPR000246 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Threonine peptidases are characterised by a threonine nucleophile at the N terminus of the mature enzyme. The threonine peptidases belong to clan PB or are unassigned, clan T-. The type example for this clan is the archaean proteasome beta component of Thermoplasma acidophilum. This group of sequences have a signature that places them in MEROPS peptidase family T2 (clan PB(T)). The glycosylasparaginases (3.5.1.26 from EC) are threonine peptidases. Also in this family is L-asparaginase (3.5.1.1 from EC), which catalyses the following reaction: L-asparagine + H2O = L-aspartate + NH3 Glycosylasparaginase catalyses: N4-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H(2)O = N-acetyl-beta-glucosaminylamine + L-aspartate cleaving the GlcNAc-Asn bond that links oligosaccharides to asparagine in N-linked glycoproteins. The enzyme is composed of two non-identical alpha/beta subunits joined by strong non-covalent forces and has one glycosylation site located in the alpha subunit [] and plays a major role in the degradation of glycoproteins.; GO: 0016787 hydrolase activity; PDB: 1APY_D 1APZ_C 2GEZ_E 2GL9_B 2GAC_D 2GAW_C 1AYY_A 1P4V_C 9GAF_A 1P4K_A ....
Probab=100.00 E-value=9.3e-74 Score=533.35 Aligned_cols=257 Identities=46% Similarity=0.688 Sum_probs=199.1
Q ss_pred CceEEEEEcCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcEEe
Q 024472 1 MGWAIALHGGAGDIPVTMPPERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSVLTNAGTVEM 80 (267)
Q Consensus 1 m~~~l~vHgGAG~~~~~~~~~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~Ve~ 80 (267)
|.|.|+||||||+++++.+.+....+++.|++|++++|++|++|++++|||++||++|||||+|||||||+||++|+|||
T Consensus 1 ~~~~iivHGGAg~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~g~~aldAV~~Av~~LEd~p~fNaG~Gs~l~~~G~ve~ 80 (319)
T PF01112_consen 1 MVPAIIVHGGAGTISDSLPIERETWYREGLRDALEAGYEVLKKGGSALDAVEAAVRVLEDDPLFNAGYGSVLNEDGEVEM 80 (319)
T ss_dssp ---EEEEEEEEESE-TTTSHHCCCHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHSTTSSSSTTSS-BTTS--EE
T ss_pred CceEEEEECCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCCCccCCCCCCCCCcEEE
Confidence 78999999999999986666677778899999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCCCccc-------ccCH-HHHHHHHH-------------hccccCCCCc----c----hhhh-----h-hc--
Q 024472 81 EACIMDGNTKRWG-------VWHP-SLALIALA-------------EHEIDYSQPI----Q----KDVE-----K-EL-- 123 (267)
Q Consensus 81 DA~iM~G~~~~~G-------i~nP-~~Ar~~la-------------~~~~~~~~p~----~----~~~~-----~-~~-- 123 (267)
|||||||+++++| |+|| ++||+||. +|..+..++. . +.++ . +.
T Consensus 81 DAsiMdg~~~~~GaV~~v~~v~nPI~vAr~v~~~~~h~lLvG~gA~~fA~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (319)
T PF01112_consen 81 DASIMDGDTLRFGAVAAVRGVKNPISVARKVMEQTPHVLLVGEGAEKFAKENGFELVDPESLITERRWEKWKKAKEQKRL 160 (319)
T ss_dssp EEEEEETTTTEEEEEEEESSBS-HHHHHHHHHHHSS-SEEEHHHHHHHHHHTT--B--GGGHHHHHHHHHHHHHHHHHCH
T ss_pred eeEEEecCCcccceEEEecCCCCHHHHHHHHHHhcccceecchHHHHHHHhcCCcccccccchhhHHHHHHHHhhhhccc
Confidence 9999999999888 9999 99999982 3333222211 0 0000 0 00
Q ss_pred -c------------cCCCCCCCCceEEEEEcCCCCeEEEeccCCCccccccccCCCCccccceEecCceeEeecCchHHH
Q 024472 124 -P------------AASGGSQLGTVGCVAVDNQGNLAAATSTGGLVNKMVGRIGDTPIIGSGTYANNLCAVSATGKGEAI 190 (267)
Q Consensus 124 -~------------~~~~~~~~dTVGaVa~D~~G~iaaatSTGG~~~K~~GRVGdspi~GaG~ya~~~~a~s~TG~GE~i 190 (267)
+ .......+||||+||+|.+|++|++|||||+++|+|||||||||||||+|||+..+|||||+||+|
T Consensus 161 ~~d~~~~~~~~~~~l~~~~~~~dTVGaVa~D~~G~iaaatSTGG~~~K~pGRVGdspi~GaG~yAd~~~gvs~TG~GE~i 240 (319)
T PF01112_consen 161 IPDPSKSQPPVQDYLDEEDSGHDTVGAVALDTNGNIAAATSTGGIFFKLPGRVGDSPIIGAGFYADNEVGVSCTGHGEDI 240 (319)
T ss_dssp BSSTTT-------SEEBTTCTC--EEEEEEETTS-EEEEEEEE-STTB-TTEE-STTSTTTSEEEETTTEEEEEE-HHHH
T ss_pred cccccccccccccccccccccCCCeeEEEEECCCCEEEEecCCCccceecccccceeecChhheeecccceeccCCHHHH
Confidence 0 001122499999999999999999999999999999999999999999999987779999999999
Q ss_pred HHHhhHHHHHHHHHhcCCC-HHHHHHHHHHhcCCCCceEEEEecCCccEEEeecCCCceeEEEecCCee
Q 024472 191 IRHTVARDVAAVMEFKGLS-LKEASAYVVEECVPRGNVGLIAVSASGEVTMPFNTTGMFRACATEDGYS 258 (267)
Q Consensus 191 ir~~lA~~i~~~~~~~g~~-~~eA~~~~i~~~~~~~~~GvI~v~~~G~~~~~~nt~~m~~a~~~~d~~~ 258 (267)
||+++|++|+++|+ .++. +.+++.+.|.+.++.+.+|+|+||++|+++++|||+.|++.|..+|++.
T Consensus 241 ir~~lA~~i~~~~~-~g~~~a~~aa~~~i~~~~~~~~~GvIav~~~G~~~~~~n~~~m~~~~~~~~~~~ 308 (319)
T PF01112_consen 241 IRTLLARRIVERMR-DGMQSAAEAAIKRIMEKFPRGTGGVIAVDKKGNIGIAFNSPGMFRYYAVQDGTV 308 (319)
T ss_dssp HHTTHHHHHHHHHH-TT-HHHHHHHHHHHHHHHHCTSEEEEEEETTS-EEEEESSSCEEEEEEEECTCE
T ss_pred HHhhHHHHHHHHhh-hccHHHHHHHHHHHHHhCCCCceEEEEEcCCCCEEEEEecCcceeeEEecCCcc
Confidence 99999999999998 6652 4555555565555569999999999999999999999998777787663
No 8
>COG1446 Asparaginase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-73 Score=518.78 Aligned_cols=258 Identities=45% Similarity=0.615 Sum_probs=222.0
Q ss_pred CceEEEEEcCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcEEe
Q 024472 1 MGWAIALHGGAGDIPVTMPPERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSVLTNAGTVEM 80 (267)
Q Consensus 1 m~~~l~vHgGAG~~~~~~~~~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~Ve~ 80 (267)
|.++|+||||||.++. ....++++.|.+|++++|.+|+.|+||||||++||++|||||+||||+||+||.||+|||
T Consensus 2 ~~~~laiHGGAG~~~~----~~~~~~~~~l~~a~~ag~~~l~~g~sALDAVv~Av~~mEd~p~fNAG~GSv~~~DG~vem 77 (307)
T COG1446 2 MKPVLAIHGGAGLMDG----AGEIAAKETLSAAVEAGYQLLSAGGSALDAVVEAVRVLEDSPLFNAGTGSVLNIDGKVEM 77 (307)
T ss_pred CceEEEEecCCCCCCc----cchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCccCccccccccCCeEEE
Confidence 4589999999995544 466789999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCCCccc-------ccCH-HHHHHHHH-------------hccccCCCCc--------chhh--h-hhc-----
Q 024472 81 EACIMDGNTKRWG-------VWHP-SLALIALA-------------EHEIDYSQPI--------QKDV--E-KEL----- 123 (267)
Q Consensus 81 DA~iM~G~~~~~G-------i~nP-~~Ar~~la-------------~~~~~~~~p~--------~~~~--~-~~~----- 123 (267)
|||||||+++++| |||| ++||.||. +|..+..+|. .+.. + .+.
T Consensus 78 DA~iMdG~~~~aGaVa~v~~vk~Pi~~Ar~Vm~~t~hVll~G~gA~~fA~~~G~p~~~~~~t~~~r~~~~~~~~~~~~~~ 157 (307)
T COG1446 78 DASIMDGATLRAGAVAAVEGVKNPILAARAVMEKTPHVLLVGEGAVAFAREMGLPREYDPFTEERRAEWLQAERDAKKQV 157 (307)
T ss_pred eeeeeeccccccceeeehhhccCHHHHHHHHHhCCCeEEEeccCHHHHHHHcCCCcCCCccchHHHHHHHHHhhhhhhcc
Confidence 9999999999998 9999 99999983 2221111111 1100 0 000
Q ss_pred --------ccCCCCCCCCceEEEEEcCCCCeEEEeccCCCccccccccCCCCccccceEecC-ceeEeecCchHHHHHHh
Q 024472 124 --------PAASGGSQLGTVGCVAVDNQGNLAAATSTGGLVNKMVGRIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHT 194 (267)
Q Consensus 124 --------~~~~~~~~~dTVGaVa~D~~G~iaaatSTGG~~~K~~GRVGdspi~GaG~ya~~-~~a~s~TG~GE~iir~~ 194 (267)
....+...+||||+||+|.+||+|++|||||+++|+|||||||||||||+|+++ .+|+||||.||.|||.+
T Consensus 158 ~~~~~~~~~~~~~~~~~gTVGaVAlD~~G~lAaaTSTGG~~~k~~GRVGDSPipGAG~ya~~~~~AvS~TG~GE~~ir~~ 237 (307)
T COG1446 158 LDHSKTYEEPEDPDSKHGTVGAVALDADGNLAAATSTGGVFLKRPGRVGDSPIPGAGFYAENGAGAVSCTGVGEVIIRNA 237 (307)
T ss_pred cchhhhcccccCCcccCCceeEEEEeCCCcEEEEEccCccccCCCCccCCCCCCCCceeecCCcceeeccchhHHHHHHh
Confidence 012334678999999999999999999999999999999999999999999998 79999999999999999
Q ss_pred hHHHHHHHHHhcCCCHHHHHHHHHHhcCC--CCceEEEEecCCccEEEeecCCCceeEEEecCCeeEEEEe
Q 024472 195 VARDVAAVMEFKGLSLKEASAYVVEECVP--RGNVGLIAVSASGEVTMPFNTTGMFRACATEDGYSQIGIW 263 (267)
Q Consensus 195 lA~~i~~~~~~~g~~~~eA~~~~i~~~~~--~~~~GvI~v~~~G~~~~~~nt~~m~~a~~~~d~~~~~~~~ 263 (267)
+|++|+.+|+ .|+++++|++.+|.+.+. ...+|+|++|++|++.+.|||+.|++||.+.++.....+|
T Consensus 238 ~a~~i~~~~~-~g~~l~~A~~~vv~~~~~~~g~~~G~IavD~~G~v~~~~n~~gm~~a~~~~~~~~~~~~~ 307 (307)
T COG1446 238 LAFDIAARVR-YGLSLDAACERVVEEALKALGGDGGLIAVDAKGNVAAAFNTKGMLRAWIKGGGIPTTAIY 307 (307)
T ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHHHHHhcCCcCceEEEcCCCCeeecccchhhhhheecCCCccccccC
Confidence 9999999998 499999999999987552 4559999999999999999999999999998887765543
No 9
>cd04703 Asparaginase_2_like A subfamily of the L-Asparaginase type 2-like enzymes. The wider family, a member of the Ntn-hydrolase superfamily, includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue.
Probab=100.00 E-value=2.1e-72 Score=505.12 Aligned_cols=234 Identities=35% Similarity=0.481 Sum_probs=202.3
Q ss_pred eEEEEEcCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcEEeee
Q 024472 3 WAIALHGGAGDIPVTMPPERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSVLTNAGTVEMEA 82 (267)
Q Consensus 3 ~~l~vHgGAG~~~~~~~~~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~Ve~DA 82 (267)
|.|+||||||++++ .|++.|++|++++|++|++ |++|||++||+.|||||+||+||||+||++|+|||||
T Consensus 1 ~~livHgGAG~~~~--------~~~~~~~~a~~~a~~~L~~--saldAv~~av~~lEd~~~~NaG~Gs~ln~~G~ve~DA 70 (246)
T cd04703 1 MRVLVHGGAGSPPD--------SRLGGLQGAAEAATAALSN--DALDAVTAAVRALESDPAFNAGTGAALQSDGAIRTDA 70 (246)
T ss_pred CeEEEEeCCCCChH--------HHHHHHHHHHHHHHHHHhh--cHHHHHHHHHHHHhcCCCCCCccCcCCCCCCCEEEEe
Confidence 57999999999753 3788999999999999998 9999999999999999999999999999999999999
Q ss_pred EEEecCCCccc-------ccCH-HHHHHHHHhccccCCCCc-chhhhhhcccCCCCCCCCceEEEEEcCCCCeEEEeccC
Q 024472 83 CIMDGNTKRWG-------VWHP-SLALIALAEHEIDYSQPI-QKDVEKELPAASGGSQLGTVGCVAVDNQGNLAAATSTG 153 (267)
Q Consensus 83 ~iM~G~~~~~G-------i~nP-~~Ar~~la~~~~~~~~p~-~~~~~~~~~~~~~~~~~dTVGaVa~D~~G~iaaatSTG 153 (267)
+||||+ +++| |||| ++||.+|.+-...++... ......+.-.+ ....+||||+|++|. |+++++||||
T Consensus 71 siMdg~-~~~GaV~~v~~vknPi~vAr~vme~t~h~lLvG~gA~~fA~~~G~~-~~~~~dTVG~valD~-G~laaatSTG 147 (246)
T cd04703 71 GVMTSD-GDFGAVAAMQGVEHPVLVARAVMEETPHVLLAGDGAVKFAALTGVE-DPGGHDTVGAVARDG-GRLAAATSTG 147 (246)
T ss_pred EEEeCC-CCeeEEEEcCCCCCHHHHHHHHHhcCCCeEEECHHHHHHHHHhCCC-CCCCCCCEEEEEEEC-CCEEEEECCC
Confidence 999997 6888 9999 999999852111111111 00000000000 224689999999999 9999999999
Q ss_pred CCccccccccCCCCccccceEecCceeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHHHHHhcC--CCCceEEEE
Q 024472 154 GLVNKMVGRIGDTPIIGSGTYANNLCAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAYVVEECV--PRGNVGLIA 231 (267)
Q Consensus 154 G~~~K~~GRVGdspi~GaG~ya~~~~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~~i~~~~--~~~~~GvI~ 231 (267)
|+++|+|||||||||||||+|||+.+||||||+||+|||+++|++++++|+ +|++|++|++++|.+.. .++.+|+|+
T Consensus 148 G~~~K~pGRVGDspi~GaG~yAd~~gavs~TG~GE~iir~~~A~~v~~~~~-~g~~~~~A~~~~i~~~~~~~~~~~G~Ia 226 (246)
T cd04703 148 GRWPALAGRVGDVPQPGAGFYAGPRGAVSATGAGEAIARNTLARSAYNRLG-TGDPAQDAAKAAISRFSEATGVTAGVIA 226 (246)
T ss_pred cccCCCCCccCCCCCCCccccccCCceEEeeecHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHhhcCCceEEEE
Confidence 999999999999999999999999999999999999999999999999998 89999999999997532 468999999
Q ss_pred ecCCccEEEeecCCCceeEE
Q 024472 232 VSASGEVTMPFNTTGMFRAC 251 (267)
Q Consensus 232 v~~~G~~~~~~nt~~m~~a~ 251 (267)
+|+ |+++++|||++|+|||
T Consensus 227 vd~-G~~~~~~~s~~m~~a~ 245 (246)
T cd04703 227 VDP-EEEGAAYSSAAMQTAV 245 (246)
T ss_pred ECC-CceEEEeCchhhhhhc
Confidence 999 9999999999999997
No 10
>PLN02937 Putative isoaspartyl peptidase/L-asparaginase
Probab=100.00 E-value=2.3e-71 Score=530.66 Aligned_cols=260 Identities=25% Similarity=0.415 Sum_probs=216.0
Q ss_pred eEEEEEcCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcEEee
Q 024472 3 WAIALHGGAGDIPVTMPPERRQPREAALRHCLDIGVDALKSQ-KHALDVVELVVRELENNPNFNAGKGSVLTNAGTVEME 81 (267)
Q Consensus 3 ~~l~vHgGAG~~~~~~~~~~~~~~~~~l~~a~~~~~~~L~~g-~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~Ve~D 81 (267)
|+|+||||||+|+. ++.++|++.|++|++++|++|++| +++||||++||++|||||+|||||||+||+||+||||
T Consensus 12 ~~v~VHgGAG~~~~----~~~~~~~~~l~~A~~aa~~~L~~g~gsalDAV~aAv~~LEd~p~fNAG~Gs~ln~dG~VElD 87 (414)
T PLN02937 12 FFVAVHVGAGYHAP----SNEKALRSAMRRACLAAAAILRQGSGGCIDAVSAAIQVLEDDPSTNAGRGSNLTEDGHVECD 87 (414)
T ss_pred eEEEEEeCCCCCch----hhHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcCCCCCCccCcCCCCCCCEEEE
Confidence 89999999999976 488999999999999999999999 9999999999999999999999999999999999999
Q ss_pred eEEEecCCCccc-------ccCH-HHHHHHH----------------------H-hccc--------------cCCCCcc
Q 024472 82 ACIMDGNTKRWG-------VWHP-SLALIAL----------------------A-EHEI--------------DYSQPIQ 116 (267)
Q Consensus 82 A~iM~G~~~~~G-------i~nP-~~Ar~~l----------------------a-~~~~--------------~~~~p~~ 116 (267)
|+||||+++++| |||| +|||+|| | +|.. +|++.+.
T Consensus 88 AsIMDG~t~~~GAVaav~~VkNPI~vAr~Vme~~~~~~~~l~~t~HvlLvGeGA~~fA~~~G~~~~e~~~~~~~~L~T~~ 167 (414)
T PLN02937 88 ASIMDGDSGAFGAVGAVPGVRNAIQIAALLAKEQMMGSSLLGRIPPMFLVGEGARQWAKSKGIDLPETVEEAEKWLVTER 167 (414)
T ss_pred eEEEeCCCCceeEEEecCCCCCHHHHHHHHHHhhcccccccCCCCCeEEECHHHHHHHHHcCCCccccccCCcccccCHH
Confidence 999999999998 9999 9999984 1 2221 2222111
Q ss_pred --hhhhhhcc-------c-----------------------------------CCCCCCCCceEEEEEcCCCCeEEEecc
Q 024472 117 --KDVEKELP-------A-----------------------------------ASGGSQLGTVGCVAVDNQGNLAAATST 152 (267)
Q Consensus 117 --~~~~~~~~-------~-----------------------------------~~~~~~~dTVGaVa~D~~G~iaaatST 152 (267)
+.+++++. . ......+||||+||+|.+|+||++|||
T Consensus 168 s~~~w~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dTVGaValD~~G~iAAaTST 247 (414)
T PLN02937 168 AKEQWKKYKTMLASAIAKSSCDSQSTSKLSELEAPRSNPSNGTGGGQSSMCTASDEDCIMDTVGVICVDSEGNIASGASS 247 (414)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccCCCCCCCEEEEEEeCCCCEEEEECC
Confidence 11111100 0 001135799999999999999999999
Q ss_pred CCCccccccccCCCCccccceEecCc--------eeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHHHHHhcC--
Q 024472 153 GGLVNKMVGRIGDTPIIGSGTYANNL--------CAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAYVVEECV-- 222 (267)
Q Consensus 153 GG~~~K~~GRVGdspi~GaG~ya~~~--------~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~~i~~~~-- 222 (267)
||+++|+|||||||||||||+|||+. +||||||+||+|||+++|++++.+|++.|++|++|++.+|++.+
T Consensus 248 GG~~~K~pGRVGDSPIiGAG~yAdn~~~~g~~~~~a~saTG~GE~iiR~~~A~~~~~~~~~~g~~p~~Aa~~~i~~~~~~ 327 (414)
T PLN02937 248 GGIAMKVSGRVGLAAMYGSGCWASSKGPFGAPFIVGCCVSGAGEYLMRGFAARECCVSSSLSQAGPASACMKVLRSVIQG 327 (414)
T ss_pred CccccCCCCccCCCCCCCceeeecCccccccCceEEEeeeccHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999864 99999999999999999999999998789999999999997533
Q ss_pred -----CCCceEEEEecCCc--------------cEEEeecCCCceeEEEe-cCCeeEEEEecCC
Q 024472 223 -----PRGNVGLIAVSASG--------------EVTMPFNTTGMFRACAT-EDGYSQIGIWTSV 266 (267)
Q Consensus 223 -----~~~~~GvI~v~~~G--------------~~~~~~nt~~m~~a~~~-~d~~~~~~~~~~~ 266 (267)
.++.+|+|+||++| ++.++|+|.+|.+||+. ...++++++-..+
T Consensus 328 ~~~~~~~~~gGvI~vd~~g~~~~~~nt~~m~~~e~~~a~~~~sf~~gy~~~~~~~~k~~~~~~~ 391 (414)
T PLN02937 328 SSAKTTDKDAGILLVQADASVMAPGNSPSLKAVEIAAAYSSLSFGIGYFGSSMERPKVSILRST 391 (414)
T ss_pred ccccccCCceEEEEEeCCCCeecccCCcccccceeeeeeccCcceEEEecCcCcCCeEEEecCc
Confidence 25889999999976 55556666667778884 4456777775543
No 11
>KOG1592 consensus Asparaginase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-70 Score=500.32 Aligned_cols=260 Identities=48% Similarity=0.711 Sum_probs=229.5
Q ss_pred eEEEEEcCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCccCCCCCcEEeee
Q 024472 3 WAIALHGGAGDIPVTMPPERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSVLTNAGTVEMEA 82 (267)
Q Consensus 3 ~~l~vHgGAG~~~~~~~~~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ln~~G~Ve~DA 82 (267)
|+|+||+|||+++. ++++++++.|++|+..+...|++|.+|+||||+|++.|||||.|||||||+||+||+|||||
T Consensus 4 ~~v~vh~Gag~~~~----~~~~~~k~~~~~a~~~a~~~l~~~~sa~DaveaAi~~LEd~p~fNAG~GSnL~~dG~VEceA 79 (326)
T KOG1592|consen 4 GFVAVHGGAGYHSA----EREIEAKHVLRRACFLAILALKSGFSALDAVEAALRELEDDPKFNAGRGSNLTIDGEVECEA 79 (326)
T ss_pred ceEEEeeccccchh----hhHHHHHHHHHHHHHhhhHHhhcCCccHHHHHHHHHHHhcCCccCCCcccccccCCcEEEEe
Confidence 99999999999886 48888999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCccc-------ccCH-HHHHHHHH---------------------h---------ccccCCCCcchh-----h
Q 024472 83 CIMDGNTKRWG-------VWHP-SLALIALA---------------------E---------HEIDYSQPIQKD-----V 119 (267)
Q Consensus 83 ~iM~G~~~~~G-------i~nP-~~Ar~~la---------------------~---------~~~~~~~p~~~~-----~ 119 (267)
|||||+++++| |+|| ++||.+|. + +++.+++..... +
T Consensus 80 SiMDGksl~fGaV~~vs~V~nPi~lAr~lm~k~~~~~~griPp~~Lvg~GAe~~A~~~G~~~v~~~~lvTe~~~~~~~~~ 159 (326)
T KOG1592|consen 80 SIMDGKSLRFGAVGAVSCVKNPISLARLLMEKQWWGSLGRIPPCFLVGEGAEKFALAHGVETVPPQHLVTERNRFTLKKF 159 (326)
T ss_pred eeecCCCccceeeccccccCCHHHHHHHHHhccccccccCCCceEEechHHHHHHHHcCCcccCCcceecHhHHHHHhhh
Confidence 99999999999 9999 99999983 1 122222211100 0
Q ss_pred -hhh------------cccCCCCCCCCceEEEEEcCCCCeEEEeccCCCccccccccCCCCccccceEec----CceeEe
Q 024472 120 -EKE------------LPAASGGSQLGTVGCVAVDNQGNLAAATSTGGLVNKMVGRIGDTPIIGSGTYAN----NLCAVS 182 (267)
Q Consensus 120 -~~~------------~~~~~~~~~~dTVGaVa~D~~G~iaaatSTGG~~~K~~GRVGdspi~GaG~ya~----~~~a~s 182 (267)
+.+ .+........||||+||+|.+||+|++|||||+.+|+||||||||++|||+||+ ..+|||
T Consensus 160 Ke~~~~~~~~~~~~~~~~~~~~~~~~dTVGaV~vD~~Gnia~gtSSGGi~lK~~GRiG~sp~yGaG~wA~~~~~~~~avs 239 (326)
T KOG1592|consen 160 KEFLQQVPAPFFPRTEVPETCFDSSLDTVGAVCVDGEGNIAAGTSSGGIVLKMPGRIGDSPIYGAGTWAENTSERTCAVS 239 (326)
T ss_pred HHHHhccccccccccccCCcccccccCcceEEEEeCCCCEEEEeccCCeeccccCcccCCcccCccccccCCCcceEEEe
Confidence 000 011112346799999999999999999999999999999999999999999997 469999
Q ss_pred ecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHHHHHhcCC--CCceEEEEecCCccEEEeecCCCceeEEEecCCeeEE
Q 024472 183 ATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAYVVEECVP--RGNVGLIAVSASGEVTMPFNTTGMFRACATEDGYSQI 260 (267)
Q Consensus 183 ~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~~i~~~~~--~~~~GvI~v~~~G~~~~~~nt~~m~~a~~~~d~~~~~ 260 (267)
+||+||+|||++|||+|+..|+++|++++++++.++.+.++ ++++|+|+|..+|.+.+.||+..|+|+|.++||..++
T Consensus 240 tTG~GE~l~r~~lAR~~~~~l~~~gl~~~~a~~~~~~~~~~~~dg~~Gli~v~~~~~~~~~f~s~~m~w~~~t~~Gy~~~ 319 (326)
T KOG1592|consen 240 TTGHGESLMRTNLAREISTLLEYQGLSLEEAADYVLRPLLAREDGTGGLIVVSASGDVVAPFTSTGMAWAYATEDGYMEY 319 (326)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHhcccCHHHHHHhhhhhhhhhccCcccEEEEEecCCeecccCcchhhhhhhcccceeee
Confidence 99999999999999999999999999999999999987665 8999999999999999999999999999999999999
Q ss_pred EEecCC
Q 024472 261 GIWTSV 266 (267)
Q Consensus 261 ~~~~~~ 266 (267)
.||.+.
T Consensus 320 ~i~~~~ 325 (326)
T KOG1592|consen 320 GIEKPK 325 (326)
T ss_pred cccCCC
Confidence 998763
No 12
>cd04513 Glycosylasparaginase Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoproteins. This enzyme is an amidase located inside lysosomes. Mutation of this gene in humans causes a genetic disorder known as aspartylglycosaminuria (AGU). The glycosylasparaginase precursor undergoes autoproteolysis through an N-O or N-S acyl rearrangement of the peptide bond, which leads to the cleavage of a peptide bond between an Asp and a Thr. This proteolysis step generates an exposed N-terminal catalytic threonine and activates the enzyme.
Probab=100.00 E-value=1.3e-65 Score=465.66 Aligned_cols=216 Identities=33% Similarity=0.458 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCC-CCCCCccCCCCCcEEeeeEEEecCCCccc-------ccCH-HHHH
Q 024472 31 RHCLDIGVDALKSQKHALDVVELVVRELENNPNF-NAGKGSVLTNAGTVEMEACIMDGNTKRWG-------VWHP-SLAL 101 (267)
Q Consensus 31 ~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~f-NaG~Gs~ln~~G~Ve~DA~iM~G~~~~~G-------i~nP-~~Ar 101 (267)
++|++++|++|++|++|||||++||+.|||||+| ||||||+||++|+|||||+||||+++++| |||| ++||
T Consensus 9 ~~a~~~g~~~L~~G~salDAv~~av~~lEd~p~f~naG~Gs~ln~~G~velDAsiMdG~~~~~GaV~~v~~vknPi~vAr 88 (263)
T cd04513 9 RNATDAAWEVLKAGGSALDAVEEGCSLCEDDPCDKSVGYGGSPDENGEVTLDAAIMDGNTMRVGAVAALRGIKNAISVAR 88 (263)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhhCcCcCCcccCcCCCCCCCEEEEeEEEecCCCceEEEEecCCCCCHHHHHH
Confidence 5688999999999999999999999999999996 59999999999999999999999999998 9999 9999
Q ss_pred HHHH-------------hccccCCCC------cch--hhhhhcccCCCCCCCCceEEEEEcCCCCeEEEeccCCCccccc
Q 024472 102 IALA-------------EHEIDYSQP------IQK--DVEKELPAASGGSQLGTVGCVAVDNQGNLAAATSTGGLVNKMV 160 (267)
Q Consensus 102 ~~la-------------~~~~~~~~p------~~~--~~~~~~~~~~~~~~~dTVGaVa~D~~G~iaaatSTGG~~~K~~ 160 (267)
+||. +|.....+| ... .+++.+. ....+||||+|++|.+||+|++|||||+++|+|
T Consensus 89 ~vme~t~h~~LvG~gA~~fA~~~G~~~~~l~t~~~~~~~~~~~~---~~~~~dTVGaValD~~G~laaatSTGG~~~K~p 165 (263)
T cd04513 89 AVMEHTKHTLLVGEGATRFAVSMGFPEENLLTERSRKAWKKWLE---ENCNHDTIGMIALDANGNIAAGTSTSGAAFKIP 165 (263)
T ss_pred HHHhhCCCeEEeCHHHHHHHHHcCCCCCcCCCHHHHHHHHHHHh---cCCCCCCEEEEEEeCCCCEEEEECCCCccCccC
Confidence 9982 232222222 111 1111111 123689999999999999999999999999999
Q ss_pred cccCCCCccccceEecCc-eeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHHHHHhc---C--CCCceEEEEecC
Q 024472 161 GRIGDTPIIGSGTYANNL-CAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAYVVEEC---V--PRGNVGLIAVSA 234 (267)
Q Consensus 161 GRVGdspi~GaG~ya~~~-~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~~i~~~---~--~~~~~GvI~v~~ 234 (267)
||||||||||||+|||+. +||||||+||+|||+++|++|+++|+ +|++|+||++.+|++. + +++.+|+|+||+
T Consensus 166 GRVGDspiiGaG~yAd~~~~a~s~TG~GE~iir~~~A~~v~~~m~-~G~~~~~A~~~~i~~~~~~~~~~~~~gg~Iavd~ 244 (263)
T cd04513 166 GRVGDSPIPGAGAYADSEVGAAAATGDGEEMMRFLPSFQAVEYMR-QGMSPKEACLEAIKRIAKHFDGPDFEGAVVALNK 244 (263)
T ss_pred CccCCCCCCCceeeecCCceEEEeeccHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHcCcCCCcEEEEEEcC
Confidence 999999999999999865 99999999999999999999999998 7999999999999752 3 367899999999
Q ss_pred CccEEEeecCC-CceeE
Q 024472 235 SGEVTMPFNTT-GMFRA 250 (267)
Q Consensus 235 ~G~~~~~~nt~-~m~~a 250 (267)
+|+++++||+. .|.|.
T Consensus 245 ~G~~~~~~~~~~~~~~~ 261 (263)
T cd04513 245 KGEYGAACNGLTEFTYA 261 (263)
T ss_pred CCCEEEEEccCCCEEEE
Confidence 99999999998 66554
No 13
>KOG1593 consensus Asparaginase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-44 Score=322.85 Aligned_cols=222 Identities=25% Similarity=0.315 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC-CCCCCCccCCCCCcEEeeeEEEecCCCccc-------ccCH-HHH
Q 024472 30 LRHCLDIGVDALKSQKHALDVVELVVRELENNPN-FNAGKGSVLTNAGTVEMEACIMDGNTKRWG-------VWHP-SLA 100 (267)
Q Consensus 30 l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~-fNaG~Gs~ln~~G~Ve~DA~iM~G~~~~~G-------i~nP-~~A 100 (267)
.++|.+++|+.|..|+++++||++.+..+|.-.. -.+|||++||++|+..+||.||||.++++| ||+. .+|
T Consensus 36 F~~A~~~Awral~~g~~~~~avveGcs~CE~lqCd~tVGyGGsPDE~GeT~lDalvmDg~tM~VGAVa~lrrIkdai~vA 115 (349)
T KOG1593|consen 36 FKEATKAAWRALLLGGSARFAVVEGCSMCEKLQCDGTVGYGGSPDENGETTLDALVMDGDTMEVGAVADLRRIKDAIRVA 115 (349)
T ss_pred hhHHHHHHHHHHHhCCchHHHHHHHHHHHHHhccCCcccCCCCcccccchhhhhheecCCceeehhhhhHHHHHHHHHHH
Confidence 3558888999999999999999999999999886 478999999999999999999999999999 9999 999
Q ss_pred HHHHH-----------------------------------------hccccCCC---Cc-chhhhhhcccC---------
Q 024472 101 LIALA-----------------------------------------EHEIDYSQ---PI-QKDVEKELPAA--------- 126 (267)
Q Consensus 101 r~~la-----------------------------------------~~~~~~~~---p~-~~~~~~~~~~~--------- 126 (267)
|.||. +|+++||. |. +..|.+|+|..
T Consensus 116 ~~Vleht~HTlLvGe~At~FA~smGf~~e~Lst~es~~~~s~W~~~nCQPNfwkNV~PDP~~sCGPYkp~~~~~~~~~~~ 195 (349)
T KOG1593|consen 116 RHVLEHTQHTLLVGESATAFANSMGFKEEDLSTEESKSWWSDWKAENCQPNFWKNVHPDPSSSCGPYKPNKLMRWDSLVN 195 (349)
T ss_pred HHHHhhhheeeeecccHHHHHHhcCCCccccCCHHHHHHHHHHHHhcCCcchhcccCCCccccCCCCCCCcccccccccc
Confidence 99870 47777774 43 23444444411
Q ss_pred ------CCCCCCCceEEEEEcCCCCeEEEeccCCCccccccccCCCCccccceEec-CceeEeecCchHHHHHHhhHHHH
Q 024472 127 ------SGGSQLGTVGCVAVDNQGNLAAATSTGGLVNKMVGRIGDTPIIGSGTYAN-NLCAVSATGKGEAIIRHTVARDV 199 (267)
Q Consensus 127 ------~~~~~~dTVGaVa~D~~G~iaaatSTGG~~~K~~GRVGdspi~GaG~ya~-~~~a~s~TG~GE~iir~~lA~~i 199 (267)
.....|||||.|++|..|+|+++|||.|..+|+|||||||||||+|.||| +.+|+.+||+|+.+||++++.+.
T Consensus 196 ~s~e~~vg~~nHDTIgM~vid~eghi~aGTStNGar~kipGRVGDspIpGagAYAddevGaa~aTGdGDvmMRFLPs~~a 275 (349)
T KOG1593|consen 196 QSDEYLVGPTNHDTIGMVVIDTEGHIAAGTSTNGARFKIPGRVGDSPIPGAGAYADDEVGAAAATGDGDVMMRFLPSYQA 275 (349)
T ss_pred cccccccCCCCCCeeeEEEEeccCceeecccCCCceeecCCccCCCCCCCccccccccccceeecCCchhHHHhhhHHHH
Confidence 12346899999999999999999999999999999999999999999997 67999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHh---cCCCCceEEEEecCCccEEEeecCCCceeEEE
Q 024472 200 AAVMEFKGLSLKEASAYVVEE---CVPRGNVGLIAVSASGEVTMPFNTTGMFRACA 252 (267)
Q Consensus 200 ~~~~~~~g~~~~eA~~~~i~~---~~~~~~~GvI~v~~~G~~~~~~nt~~m~~a~~ 252 (267)
++.|+ +|+.|.||++++|.+ .++++.+.||++|+.|.++.++.---=-|+|+
T Consensus 276 Ve~Mr-~G~~P~eAa~~~i~RI~khfp~F~gAvia~n~~G~ygaaC~g~~~~F~ym 330 (349)
T KOG1593|consen 276 VEQMR-AGKKPAEAAQKAISRILKHFPDFSGAVIAANVLGSYGAACYGINNKFGYM 330 (349)
T ss_pred HHHHH-cCCChHHHHHHHHHHHHHhCccceeeEEEEeccCchhhhhcccccceeeE
Confidence 99997 999999999999864 35789999999999999988644321134555
No 14
>TIGR00066 g_glut_trans gamma-glutamyltranspeptidase. Also called gamma-glutamyltranspeptidase (ggt). Some members of this family have antibiotic synthesis or resistance activities. In the case of a cephalosporin acylase from Pseudomonas sp., the enzyme was shown to retain some gamma-glutamyltranspeptidase activity. Other, more distantly related proteins have ggt-related activities and score below the trusted cutoff.
Probab=84.39 E-value=1.4 Score=44.25 Aligned_cols=38 Identities=32% Similarity=0.347 Sum_probs=29.2
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCc
Q 024472 33 CLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGS 70 (267)
Q Consensus 33 a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs 70 (267)
|.++|.++|++|++|+||++++.-+|=--.-..+|.|+
T Consensus 10 as~aG~~vL~~GGNAvDAAIAa~~~l~VveP~~sGiGG 47 (516)
T TIGR00066 10 ASEIGEDILKEGGNAFDAAVAVGLALAVVEPFMTGLGG 47 (516)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhhccccCCCCC
Confidence 67789999999999999999986666554444566544
No 15
>COG0405 Ggt Gamma-glutamyltransferase [Amino acid transport and metabolism]
Probab=83.46 E-value=1.7 Score=44.03 Aligned_cols=38 Identities=26% Similarity=0.310 Sum_probs=27.8
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCc
Q 024472 33 CLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGS 70 (267)
Q Consensus 33 a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs 70 (267)
|.++|.++|++|++|.||++++--+|=-=.-+.+|.|+
T Consensus 26 As~aG~~iL~~GGNA~DAAVA~~~~L~VveP~ssGiGG 63 (539)
T COG0405 26 ASQAGLDILKKGGNAVDAAVAVAAALAVVEPQSSGIGG 63 (539)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhhccccCCCCC
Confidence 66889999999999999999875555443344555443
No 16
>PLN02198 glutathione gamma-glutamylcysteinyltransferase
Probab=82.23 E-value=2 Score=43.88 Aligned_cols=39 Identities=23% Similarity=0.326 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCc
Q 024472 32 HCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGS 70 (267)
Q Consensus 32 ~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs 70 (267)
.|.++|.++|++|++|+||++++.-+|=--.-+.+|.|+
T Consensus 42 ~as~aG~~iL~~GGNAvDAAVAa~~~l~VveP~~sGiGG 80 (573)
T PLN02198 42 RCSVIGMNVLREGGNAIDASVAAALCLGVVSPASSGIGG 80 (573)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhhccccCCCCC
Confidence 467789999999999999999885555444444666554
No 17
>PLN02180 gamma-glutamyl transpeptidase 4
Probab=81.99 E-value=1.7 Score=44.98 Aligned_cols=38 Identities=24% Similarity=0.427 Sum_probs=29.0
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCc
Q 024472 33 CLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGS 70 (267)
Q Consensus 33 a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs 70 (267)
|.++|.++|++|++|+||++++.-+|=--.-..+|.|+
T Consensus 92 As~aG~~IL~~GGNAVDAAVAaa~aL~VveP~~sGiGG 129 (639)
T PLN02180 92 CSEIGASVLRRGGHAVDAAVAITLCIGVVNPMSSGIGG 129 (639)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhccCCCCC
Confidence 67789999999999999999886665554444555544
No 18
>PF06267 DUF1028: Family of unknown function (DUF1028); InterPro: IPR010430 This is a family of bacterial and archaeal proteins with unknown function.; PDB: 2IMH_A.
Probab=81.64 E-value=6.7 Score=34.66 Aligned_cols=92 Identities=24% Similarity=0.259 Sum_probs=52.0
Q ss_pred ceEEEEEcCC-CCeEEEeccCCCccccccccCCCCccccceEec-CceeEeecCchHHHHHHhhHHHHHHHHHhcCCCHH
Q 024472 134 TVGCVAVDNQ-GNLAAATSTGGLVNKMVGRIGDTPIIGSGTYAN-NLCAVSATGKGEAIIRHTVARDVAAVMEFKGLSLK 211 (267)
Q Consensus 134 TVGaVa~D~~-G~iaaatSTGG~~~K~~GRVGdspi~GaG~ya~-~~~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~ 211 (267)
|--.|+.|.+ |.+..+++|+-+.- |.+ + -|+. ..+++++=.. ..-.+.....++|+ +|.+++
T Consensus 1 TfSIvArdp~tg~~GvAvaS~~~aV---Ga~----v----p~~~~gvGavaTQ~~----tnp~~g~~~L~ll~-~G~~a~ 64 (190)
T PF06267_consen 1 TFSIVARDPETGQFGVAVASSSPAV---GAR----V----PWARAGVGAVATQAY----TNPRLGPRGLDLLE-AGLSAE 64 (190)
T ss_dssp EEEEEEE-TTT--EEEEEEESSS-H---HHH----H----EEEETTTEEEEEESS----S--HHHHHHHHHHH-TT--HH
T ss_pred CeEEEEEcCCCCcEEEEEEecCccc---ccc----c----ccccCCcCEEEeccc----CCHHHHHHHHHHHH-cCCCHH
Confidence 3446888965 88888888775432 111 1 2554 3566665543 34456778889997 899999
Q ss_pred HHHHHHHHhcCCCCceEEEEecCCccEEEe
Q 024472 212 EASAYVVEECVPRGNVGLIAVSASGEVTMP 241 (267)
Q Consensus 212 eA~~~~i~~~~~~~~~GvI~v~~~G~~~~~ 241 (267)
++++.++++.....+-=+.+||.+|+....
T Consensus 65 ~al~~l~~~D~~~~~RQ~~vvd~~G~~a~~ 94 (190)
T PF06267_consen 65 EALAALLAADPGREYRQLAVVDAQGRTAAF 94 (190)
T ss_dssp HHHHHHHHT-TTGGG-EEEEEETTS-EEEE
T ss_pred HHHHHHHhcCCCcccccEEEECCCCCeEEE
Confidence 999999975432233335567888876543
No 19
>PRK09615 ggt gamma-glutamyltranspeptidase; Reviewed
Probab=81.32 E-value=2 Score=43.92 Aligned_cols=51 Identities=25% Similarity=0.292 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCcc---C--CCCCcEE-eee
Q 024472 32 HCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGSV---L--TNAGTVE-MEA 82 (267)
Q Consensus 32 ~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~---l--n~~G~Ve-~DA 82 (267)
.|.++|.++|++|++|+||++++.-+|=--.-+.+|.|+- + +.+++++ +|+
T Consensus 58 lAs~aG~~VL~~GGNAvDAAVAaa~~l~VveP~~sGiGGggf~lv~~~~~~~~~id~ 114 (581)
T PRK09615 58 TATQVGVDILKQGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLLRTKNGNTTAIDF 114 (581)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCcccCEEEEEEECCCcEEEEEc
Confidence 3677899999999999999988854444333445555442 2 3445554 555
No 20
>PLN02180 gamma-glutamyl transpeptidase 4
Probab=78.52 E-value=10 Score=39.33 Aligned_cols=82 Identities=21% Similarity=0.189 Sum_probs=50.9
Q ss_pred CCceEEEEEcCCCCeEEEeccCCCcc-----------ccccccCCCCcccc----------ceE---------------e
Q 024472 132 LGTVGCVAVDNQGNLAAATSTGGLVN-----------KMVGRIGDTPIIGS----------GTY---------------A 175 (267)
Q Consensus 132 ~dTVGaVa~D~~G~iaaatSTGG~~~-----------K~~GRVGdspi~Ga----------G~y---------------a 175 (267)
+||+-..++|.+|+.++.|+|=+..| -+--|..|-.+++. -.+ +
T Consensus 418 ~~TTh~SVvD~dGnaVS~T~Si~~~FGSgvv~p~tGi~lNN~m~~Fs~~~~~n~~gl~p~~~N~i~PGKRP~ssmsPtIv 497 (639)
T PLN02180 418 QGTSHFCIVDADRNSVSMTSTVNYGFGAGVLSPSTGIVLNNEMDDFSTPAEITPDMLPPAPTNFIEPNKRPLSSMTPLVI 497 (639)
T ss_pred CCCeEEEEEcCCCCEEEEecccCCCcCCeEEeCCceeEEcCcccccCCCcccccccCCCCCcCcCCCCCCccccCCCeEE
Confidence 59999999999999999999943322 11123333322210 000 0
Q ss_pred --cC--ceeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHH
Q 024472 176 --NN--LCAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAY 216 (267)
Q Consensus 176 --~~--~~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~ 216 (267)
+. ..++.+.| |..|.... ++.+...+. .|+++++|++.
T Consensus 498 ~~~g~~~lalGs~G-G~~I~~av-~Qviln~l~-~Gm~lq~AI~a 539 (639)
T PLN02180 498 TKDGEFVAALGGAG-GMHIIPAV-LQVFLNCFV-LNMKPKEAVES 539 (639)
T ss_pred EeCCcEEEEEECCC-hHHHHHHH-HHHHHHHHh-CCCCHHHHHhc
Confidence 10 23455555 66666654 777777775 89999999864
No 21
>TIGR00066 g_glut_trans gamma-glutamyltranspeptidase. Also called gamma-glutamyltranspeptidase (ggt). Some members of this family have antibiotic synthesis or resistance activities. In the case of a cephalosporin acylase from Pseudomonas sp., the enzyme was shown to retain some gamma-glutamyltranspeptidase activity. Other, more distantly related proteins have ggt-related activities and score below the trusted cutoff.
Probab=78.05 E-value=15 Score=37.04 Aligned_cols=82 Identities=23% Similarity=0.253 Sum_probs=49.4
Q ss_pred CCceEEEEEcCCCCeEEEeccCCCcc-----------ccccccCCCCc-cccceEe-----------------cC--cee
Q 024472 132 LGTVGCVAVDNQGNLAAATSTGGLVN-----------KMVGRIGDTPI-IGSGTYA-----------------NN--LCA 180 (267)
Q Consensus 132 ~dTVGaVa~D~~G~iaaatSTGG~~~-----------K~~GRVGdspi-~GaG~ya-----------------~~--~~a 180 (267)
+||.-..++|.+|+.++.|+|=+..| -+-.|.+|-.. +|.-.+. +. ..+
T Consensus 342 ~~TTh~svvD~dGnaVs~t~Si~~~FGSg~~~~~tGi~lNN~~~~F~~~p~~~N~~~PgKRP~stmsP~iv~~~~~~~l~ 421 (516)
T TIGR00066 342 SQTTHFSVVDRDGNAVSLTTTINLEFGSGVHAPDTGILLNNEMDDFSLKPGGANAVEPNKRPLSSMAPTIVLKDGKPDLV 421 (516)
T ss_pred CCCEEEEEEcCCCCEEEEEeccCCCCCCeEEeCCceEEEcccccccCCCCCCCCcCCCCCccccccCcceEEECCceEEE
Confidence 59999999999999999999954432 11223333211 2211111 00 112
Q ss_pred EeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHH
Q 024472 181 VSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAY 216 (267)
Q Consensus 181 ~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~ 216 (267)
..++ |=.-|...+++.+...+. .|++++||++.
T Consensus 422 ~Gs~--GG~~i~~~~~qvl~~~l~-~gm~l~~AI~a 454 (516)
T TIGR00066 422 VGSP--GGSRIITTVLQTIVRHID-YGMPLAEAVSE 454 (516)
T ss_pred EeCC--CchHHHHHHHHHHHHHHH-cCCCHHHHHhc
Confidence 2222 445556667788888775 79999999864
No 22
>PF01019 G_glu_transpept: Gamma-glutamyltranspeptidase; InterPro: IPR000101 Gamma-glutamyltranspeptidase (2.3.2.2 from EC) (GGT) [] catalyzes the transfer of the gamma-glutamyl moiety of glutathione to an acceptor that may be an amino acid, a peptide or water (forming glutamate). GGT plays a key role in the gamma-glutamyl cycle, a pathway for the synthesis and degradation of glutathione and drug and xenobiotic detoxification []. In prokaryotes and eukaryotes, it is an enzyme that consists of two polypeptide chains, a heavy and a light subunit, processed from a single chain precursor by an autocatalytic cleavage. The active site of GGT is known to be located in the light subunit. The sequences of mammalian and bacterial GGT show a number of regions of high similarity []. Pseudomonas cephalosporin acylases (3.5.1 from EC) that convert 7-beta-(4-carboxybutanamido)-cephalosporanic acid (GL-7ACA) into 7-aminocephalosporanic acid (7ACA) and glutaric acid are evolutionary related to GGT and also show some GGT activity []. Like GGT, these GL-7ACA acylases, are also composed of two subunits. As an autocatalytic peptidase GGT belongs to MEROPS peptidase family T3 (gamma-glutamyltransferase family, clan PB(T)). The active site residue for members of this family and family T1 is C-terminal to the autolytic cleavage site. The type example is gamma-glutamyltransferase 1 from Escherichia coli. ; GO: 0003840 gamma-glutamyltransferase activity; PDB: 2DBX_A 2Z8K_D 2Z8I_B 2DBU_D 2E0X_B 2DBW_B 2E0W_B 2DG5_A 2E0Y_C 2Z8J_C ....
Probab=77.62 E-value=8.5 Score=38.56 Aligned_cols=83 Identities=25% Similarity=0.307 Sum_probs=49.5
Q ss_pred CCCceEEEEEcCCCCeEEEeccCCCccc-----------cccccCCCC------ccccceEe-----------------c
Q 024472 131 QLGTVGCVAVDNQGNLAAATSTGGLVNK-----------MVGRIGDTP------IIGSGTYA-----------------N 176 (267)
Q Consensus 131 ~~dTVGaVa~D~~G~iaaatSTGG~~~K-----------~~GRVGdsp------i~GaG~ya-----------------~ 176 (267)
..||.-.+++|.+||+.+.|+|-+..|- +..|..+-. .++.-.+. +
T Consensus 324 ~~~Tth~svvD~~Gn~Vs~t~Si~~~FGSg~~~p~tG~~lNn~~~~F~~~~~~~~~~~~N~~~PgkRp~st~~P~iv~~~ 403 (510)
T PF01019_consen 324 DGDTTHFSVVDKDGNAVSLTQSIGSPFGSGVVVPGTGFLLNNRMSDFSPNPFGLDPGHPNALAPGKRPLSTMSPTIVFKD 403 (510)
T ss_dssp TTEEEEEEEEETTS-EEEEEEEESSTTTTSEBETTTTEBE--GGGGSB--TTSSSTTSTTB--TT-B--B----EEEEET
T ss_pred CCCceeeeeECCCCCEEEeccccCCCCCccEecCcccccccccCcccccCccCCCCCCCCccccCCCCCccccceeEEec
Confidence 4689999999999999999999876442 122222221 11111110 0
Q ss_pred C--ceeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHH
Q 024472 177 N--LCAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAY 216 (267)
Q Consensus 177 ~--~~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~ 216 (267)
. ..++.+.| |..| -...++.++..+. .|++++||++.
T Consensus 404 g~~~l~~Gs~G-G~~i-~~~~~qvl~~~l~-~g~~l~~AI~a 442 (510)
T PF01019_consen 404 GKPVLAIGSPG-GDRI-PQAVAQVLLNYLD-FGMDLQEAIAA 442 (510)
T ss_dssp TEEEEEEEEES-GGGH-HHHHHHHHHHHHT-TSS-HHHHHHS
T ss_pred CCccEEeeccc-cccc-chhHHhhhhhhhc-CCCChhhhhcC
Confidence 0 24666666 6666 4456667777775 79999998864
No 23
>PLN02198 glutathione gamma-glutamylcysteinyltransferase
Probab=72.40 E-value=26 Score=35.85 Aligned_cols=82 Identities=20% Similarity=0.097 Sum_probs=50.4
Q ss_pred CCceEEEEEcCCCCeEEEeccCCCc-----------cccccccCCCCcccc--c----------eEe-------------
Q 024472 132 LGTVGCVAVDNQGNLAAATSTGGLV-----------NKMVGRIGDTPIIGS--G----------TYA------------- 175 (267)
Q Consensus 132 ~dTVGaVa~D~~G~iaaatSTGG~~-----------~K~~GRVGdspi~Ga--G----------~ya------------- 175 (267)
+||.-..++|.+|+.++.|+|=+.. +-+--|..|-.++.- | .+.
T Consensus 367 ~~TTh~sVvD~dGnaVS~T~Si~~~FGSgv~~p~tGi~lNN~m~~F~~~~~~~~~~~~~~~~~~N~i~PGKRP~ssmsPt 446 (573)
T PLN02198 367 HGTSHLSIIDSERNAVSMTSTINGYFGALMLSPSTGIVLNNEMDDFSIPMKSGGNLDVPPPAPANFIRPGKRPLSSMTPT 446 (573)
T ss_pred CCCEEEEEECCCCCEEEEeeccCCCCCCeEEeCCCceEEecCccccCCCCCCCCcccccCCCCCCcCCCCCcccccCCCe
Confidence 5999999999999999999994332 222334555433321 1 111
Q ss_pred ----cC--ceeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHH
Q 024472 176 ----NN--LCAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAY 216 (267)
Q Consensus 176 ----~~--~~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~ 216 (267)
+. ..+..+. |=.-|...+++.++..+. .|+++++|++.
T Consensus 447 Iv~~~g~~~l~lGa~--GG~~i~~a~~qvi~~~l~-~gm~l~~AI~a 490 (573)
T PLN02198 447 IVLKDGKVKAAVGAS--GGANIIAGTTEVYLNHFF-LKMDPLSSVLA 490 (573)
T ss_pred EEEECCcEEEEEECC--CchhHHHHHHHHHHHHHh-CCCCHHHHHhc
Confidence 00 1222222 335555667778887775 79999999864
No 24
>PF01019 G_glu_transpept: Gamma-glutamyltranspeptidase; InterPro: IPR000101 Gamma-glutamyltranspeptidase (2.3.2.2 from EC) (GGT) [] catalyzes the transfer of the gamma-glutamyl moiety of glutathione to an acceptor that may be an amino acid, a peptide or water (forming glutamate). GGT plays a key role in the gamma-glutamyl cycle, a pathway for the synthesis and degradation of glutathione and drug and xenobiotic detoxification []. In prokaryotes and eukaryotes, it is an enzyme that consists of two polypeptide chains, a heavy and a light subunit, processed from a single chain precursor by an autocatalytic cleavage. The active site of GGT is known to be located in the light subunit. The sequences of mammalian and bacterial GGT show a number of regions of high similarity []. Pseudomonas cephalosporin acylases (3.5.1 from EC) that convert 7-beta-(4-carboxybutanamido)-cephalosporanic acid (GL-7ACA) into 7-aminocephalosporanic acid (7ACA) and glutaric acid are evolutionary related to GGT and also show some GGT activity []. Like GGT, these GL-7ACA acylases, are also composed of two subunits. As an autocatalytic peptidase GGT belongs to MEROPS peptidase family T3 (gamma-glutamyltransferase family, clan PB(T)). The active site residue for members of this family and family T1 is C-terminal to the autolytic cleavage site. The type example is gamma-glutamyltransferase 1 from Escherichia coli. ; GO: 0003840 gamma-glutamyltransferase activity; PDB: 2DBX_A 2Z8K_D 2Z8I_B 2DBU_D 2E0X_B 2DBW_B 2E0W_B 2DG5_A 2E0Y_C 2Z8J_C ....
Probab=67.58 E-value=5.8 Score=39.73 Aligned_cols=47 Identities=19% Similarity=0.249 Sum_probs=26.8
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCcc-----C-CCCCcE-EeeeEE
Q 024472 38 VDALKSQKHALDVVELVVRELENNPNFNAGKGSV-----L-TNAGTV-EMEACI 84 (267)
Q Consensus 38 ~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~-----l-n~~G~V-e~DA~i 84 (267)
+++|++|++|+||++++.-+|=--.-..+|.|+- - ...+++ -+|++-
T Consensus 1 m~vL~~GGNAvDAAvAaa~~l~Vv~P~~~giGG~~~~lv~~~~~~~~~~id~~~ 54 (510)
T PF01019_consen 1 MDVLRKGGNAVDAAVAAALALGVVEPHSSGIGGGGFMLVYDAKTGKVHAIDGRG 54 (510)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHSTTT-STTSEEEEEEEETTSEEEEEEEE--
T ss_pred ChHHHhCCCHHHHHHHHHHHHhhcCcccCCcccCcEEEEEecCCcceeEecCcc
Confidence 5799999999999999865554433445566653 1 234445 466653
No 25
>PRK09615 ggt gamma-glutamyltranspeptidase; Reviewed
Probab=64.75 E-value=39 Score=34.66 Aligned_cols=83 Identities=23% Similarity=0.211 Sum_probs=50.4
Q ss_pred CCceEEEEEcCCCCeEEEeccCCCcc-----------ccccccCCCC-ccccce-----------Ee-------------
Q 024472 132 LGTVGCVAVDNQGNLAAATSTGGLVN-----------KMVGRIGDTP-IIGSGT-----------YA------------- 175 (267)
Q Consensus 132 ~dTVGaVa~D~~G~iaaatSTGG~~~-----------K~~GRVGdsp-i~GaG~-----------ya------------- 175 (267)
+||.-..++|.+||.++.|+|=+..| -+--|..|-. .+|.-. ++
T Consensus 390 ~~TTh~sVvD~~GnaVS~T~Si~~~FGSgv~~pgtGi~lNN~m~~Fs~~pg~~n~~g~~~~~~N~i~PGKRP~stmsPti 469 (581)
T PRK09615 390 NQTTHFSVVDKDGNAVAVTYTLNTTFGTGIVAGNSGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTI 469 (581)
T ss_pred CCCEEEEEEcCCCCEEEEEcccCcCcCceEEeCCceeEEcCcccccCCCCCCCccccCCCCCcCcCCCCCcccccCCCeE
Confidence 59999999999999999999933322 2223444432 244210 11
Q ss_pred ---cC-ceeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHHHHH
Q 024472 176 ---NN-LCAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEASAY 216 (267)
Q Consensus 176 ---~~-~~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA~~~ 216 (267)
+. ..-+..|. |=.-|...+++-|+..+. .|+++++|++.
T Consensus 470 v~~~g~~~la~Gs~-GG~~i~~a~~qvi~n~l~-~gm~l~~AV~a 512 (581)
T PRK09615 470 VVKDGKTWLVTGSP-GGSRIITTVLQMVVNSID-YGMNVAEATNA 512 (581)
T ss_pred EEECCcEEEEEECC-CchHHHHHHHHHHHHHHh-CCCCHHHHHhC
Confidence 00 11222232 444555667778888775 79999999864
No 26
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=61.84 E-value=22 Score=31.57 Aligned_cols=43 Identities=9% Similarity=0.038 Sum_probs=37.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 21 ERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 21 ~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
+...+..+.+++|.+++.+.||.|.++-|.-.++-..++...+
T Consensus 109 ~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~ 151 (228)
T cd01090 109 DAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDL 151 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCC
Confidence 3455678999999999999999999999998888899998764
No 27
>KOG2410 consensus Gamma-glutamyltransferase [Amino acid transport and metabolism]
Probab=60.12 E-value=12 Score=38.43 Aligned_cols=40 Identities=23% Similarity=0.323 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCc
Q 024472 31 RHCLDIGVDALKSQKHALDVVELVVRELENNPNFNAGKGS 70 (267)
Q Consensus 31 ~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs 70 (267)
....+.+..+|++|++|+||++++.-++=.--.++.|.|+
T Consensus 58 ~~CS~IG~~iL~~GGnAVDAAIAa~lC~Gvvnp~SsGIGG 97 (579)
T KOG2410|consen 58 ARCSEIGRSILRKGGNAVDAAIAALLCLGVVNPHSSGIGG 97 (579)
T ss_pred hHHHHHHHHHHHhcccHHHHHHHHHHhccccccccccccc
Confidence 3455668899999999999999987766555556776554
No 28
>PRK07281 methionine aminopeptidase; Reviewed
Probab=57.27 E-value=28 Score=32.30 Aligned_cols=41 Identities=7% Similarity=0.024 Sum_probs=34.8
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNP 62 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p 62 (267)
...+..+.+++|.+++++.+|.|.+.-|.-.++-..+++..
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G 189 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRG 189 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcC
Confidence 45567789999999999999999999998888888888643
No 29
>COG3342 Uncharacterized conserved protein [Function unknown]
Probab=56.46 E-value=62 Score=29.90 Aligned_cols=90 Identities=22% Similarity=0.362 Sum_probs=53.5
Q ss_pred EEEEEcCC-CCeEEEeccCCCccccccccCCCCccccceEec-CceeEeecCchHHHHHHhhHHHHHHHHHhcCCCHHHH
Q 024472 136 GCVAVDNQ-GNLAAATSTGGLVNKMVGRIGDTPIIGSGTYAN-NLCAVSATGKGEAIIRHTVARDVAAVMEFKGLSLKEA 213 (267)
Q Consensus 136 GaVa~D~~-G~iaaatSTGG~~~K~~GRVGdspi~GaG~ya~-~~~a~s~TG~GE~iir~~lA~~i~~~~~~~g~~~~eA 213 (267)
-.|++|.+ +.+-.+.+| |.++ || +++| |+. ..+|+.+- .+-...+-..+.++|+ +|.+++||
T Consensus 4 SIv~~~p~t~~~GvaV~s-----kf~a-vG-a~vP----~~~a~~GAvATQ----s~an~~~G~~gld~L~-~G~~~~ea 67 (265)
T COG3342 4 SIVARDPETGEVGVAVQS-----KFIA-VG-AIVP----WAKAGVGAVATQ----SYANPALGSAGLDLLA-QGLAAEEA 67 (265)
T ss_pred EEEEECCCCCceeEEEEe-----ccee-cc-cccc----ccccCcceeeee----hhcccccchHHHHHHH-ccCCHHHH
Confidence 44666644 344444443 4444 55 4555 665 44555432 3334456667788887 99999999
Q ss_pred HHHHHHhcC--CCCceEEEEecCCccEEEeecC
Q 024472 214 SAYVVEECV--PRGNVGLIAVSASGEVTMPFNT 244 (267)
Q Consensus 214 ~~~~i~~~~--~~~~~GvI~v~~~G~~~~~~nt 244 (267)
++.++...- ...+.|+ ||.+|+. ++||-
T Consensus 68 l~~ll~~d~~~~~RQvgv--V~~~G~a-~aFtG 97 (265)
T COG3342 68 LAQLLNSDDERELRQVGV--VDQKGRA-AAFTG 97 (265)
T ss_pred HHHHHccCcchhheeeeE--EcCCCce-eeecC
Confidence 999996422 3467775 4667754 34443
No 30
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=53.34 E-value=25 Score=31.69 Aligned_cols=40 Identities=15% Similarity=0.079 Sum_probs=34.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENN 61 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~ 61 (267)
...+.-+.+.++.+++++.||.|.+.-|.-.++...++..
T Consensus 120 ~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~ 159 (243)
T cd01091 120 EQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKK 159 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHh
Confidence 4556778899999999999999999999988888888875
No 31
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=50.61 E-value=42 Score=29.71 Aligned_cols=42 Identities=7% Similarity=0.003 Sum_probs=36.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
...+..+.++++.+++.+.+|.|.++-|.-.++.+.+++..+
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~ 158 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGF 158 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 455677888999999999999999999999988899888753
No 32
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=48.97 E-value=26 Score=29.82 Aligned_cols=42 Identities=26% Similarity=0.279 Sum_probs=36.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
...+..+.++++.+.+.+.||.|.+.-|...+..+.+++..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~ 144 (207)
T PF00557_consen 103 EQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGL 144 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTE
T ss_pred cccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcc
Confidence 455677888999999999999999999999999999999764
No 33
>PRK05716 methionine aminopeptidase; Validated
Probab=44.69 E-value=59 Score=28.73 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=35.8
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNP 62 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p 62 (267)
...+..+.+.++.+++.+.+|.|.+.-|.-.++.+.+++..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g 159 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEG 159 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 45567788999999999999999999999999999999864
No 34
>PLN02689 Bifunctional isoaspartyl peptidase/L-asparaginase
Probab=43.99 E-value=21 Score=34.00 Aligned_cols=27 Identities=33% Similarity=0.532 Sum_probs=24.5
Q ss_pred CceEEEEEcCCCCeEEEeccCCCcccc
Q 024472 133 GTVGCVAVDNQGNLAAATSTGGLVNKM 159 (267)
Q Consensus 133 dTVGaVa~D~~G~iaaatSTGG~~~K~ 159 (267)
++.|.|++|.+|+++++.+|.|+..-+
T Consensus 279 ~~gG~Iavd~~G~~~~~~nt~~m~~a~ 305 (318)
T PLN02689 279 GPAGLIAVSATGEVAMAFNTTGMFRAC 305 (318)
T ss_pred CceEEEEEcCCccEEEEeCCcCeEEEE
Confidence 789999999999999999999988654
No 35
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=40.75 E-value=58 Score=31.27 Aligned_cols=42 Identities=17% Similarity=0.162 Sum_probs=35.8
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
...+..+.+.+|.+++++.+|.|-++-|.-.++...+++.++
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~ 312 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGI 312 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCC
Confidence 344566789999999999999999999999998899998654
No 36
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=40.19 E-value=51 Score=31.24 Aligned_cols=58 Identities=29% Similarity=0.481 Sum_probs=41.1
Q ss_pred CCceEEEEEcCCCCeEEEeccCCCcc----ccccc-cCCCCcc-ccceEecCceeEeecCchHH
Q 024472 132 LGTVGCVAVDNQGNLAAATSTGGLVN----KMVGR-IGDTPII-GSGTYANNLCAVSATGKGEA 189 (267)
Q Consensus 132 ~dTVGaVa~D~~G~iaaatSTGG~~~----K~~GR-VGdspi~-GaG~ya~~~~a~s~TG~GE~ 189 (267)
.+=+|.||.|..|+..++||--|... .-.|| ++..+++ .||.-....+-+.+||.|+.
T Consensus 216 ~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~D~cGva~~~~~f~~ssG~G~~ 279 (305)
T PF07433_consen 216 NGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLPDACGVAPTDDGFLVSSGQGQL 279 (305)
T ss_pred CCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccCceeeeeecCCceEEeCCCccE
Confidence 47899999999998888888666433 33577 6667776 55655555556777888873
No 37
>cd04702 ASRGL1_like ASRGL1_like domains, a subfamily of the L-Asparaginase type 2-like enzymes. The wider family includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue. ASRGL1, or asparaginase-like 1, has been cloned from mammalian testis cDNA libraries. It has been identified as a sperm antigen that may induce the production of autoantibodies following obstruction of the male reproductive tract, e.g. vasectomy.
Probab=40.02 E-value=30 Score=32.12 Aligned_cols=27 Identities=26% Similarity=0.411 Sum_probs=23.6
Q ss_pred CCceEEEEEcCCCCeEEEeccCCCccc
Q 024472 132 LGTVGCVAVDNQGNLAAATSTGGLVNK 158 (267)
Q Consensus 132 ~dTVGaVa~D~~G~iaaatSTGG~~~K 158 (267)
.++.|.|++|.+|+++++.+|.++.+-
T Consensus 223 ~g~gG~Iavd~~G~~~~a~nt~~m~~a 249 (261)
T cd04702 223 KGTGGAIVLDSSGEVGAAFNSKRMAWA 249 (261)
T ss_pred CCceEEEEEeCCCCEEEEeCCCCceEE
Confidence 467899999999999999999987654
No 38
>COG1446 Asparaginase [Amino acid transport and metabolism]
Probab=39.34 E-value=31 Score=32.71 Aligned_cols=27 Identities=33% Similarity=0.610 Sum_probs=24.2
Q ss_pred CCceEEEEecCCccEEEeecCCCceeE
Q 024472 224 RGNVGLIAVSASGEVTMPFNTTGMFRA 250 (267)
Q Consensus 224 ~~~~GvI~v~~~G~~~~~~nt~~m~~a 250 (267)
.+++|++++|++|++..+.+|-+|++-
T Consensus 174 ~gTVGaVAlD~~G~lAaaTSTGG~~~k 200 (307)
T COG1446 174 HGTVGAVALDADGNLAAATSTGGVFLK 200 (307)
T ss_pred CCceeEEEEeCCCcEEEEEccCccccC
Confidence 469999999999999999999998663
No 39
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=39.29 E-value=86 Score=26.46 Aligned_cols=43 Identities=12% Similarity=0.059 Sum_probs=35.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 21 ERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 21 ~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
+...+..+.+.++.+.+.+.|+.|.+.-|.-.++.+.+++..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~ 145 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGY 145 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCc
Confidence 3455667788888899999999999999888888888888764
No 40
>cd04513 Glycosylasparaginase Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoproteins. This enzyme is an amidase located inside lysosomes. Mutation of this gene in humans causes a genetic disorder known as aspartylglycosaminuria (AGU). The glycosylasparaginase precursor undergoes autoproteolysis through an N-O or N-S acyl rearrangement of the peptide bond, which leads to the cleavage of a peptide bond between an Asp and a Thr. This proteolysis step generates an exposed N-terminal catalytic threonine and activates the enzyme.
Probab=35.67 E-value=70 Score=29.68 Aligned_cols=27 Identities=26% Similarity=0.455 Sum_probs=24.5
Q ss_pred CCCceEEEEecCCccEEEeecCCCcee
Q 024472 223 PRGNVGLIAVSASGEVTMPFNTTGMFR 249 (267)
Q Consensus 223 ~~~~~GvI~v~~~G~~~~~~nt~~m~~ 249 (267)
..+++|++++|.+|++..+.+|.++++
T Consensus 136 ~~dTVGaValD~~G~laaatSTGG~~~ 162 (263)
T cd04513 136 NHDTIGMIALDANGNIAAGTSTSGAAF 162 (263)
T ss_pred CCCCEEEEEEeCCCCEEEEECCCCccC
Confidence 347999999999999999999999876
No 41
>PF01112 Asparaginase_2: Asparaginase; InterPro: IPR000246 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Threonine peptidases are characterised by a threonine nucleophile at the N terminus of the mature enzyme. The threonine peptidases belong to clan PB or are unassigned, clan T-. The type example for this clan is the archaean proteasome beta component of Thermoplasma acidophilum. This group of sequences have a signature that places them in MEROPS peptidase family T2 (clan PB(T)). The glycosylasparaginases (3.5.1.26 from EC) are threonine peptidases. Also in this family is L-asparaginase (3.5.1.1 from EC), which catalyses the following reaction: L-asparagine + H2O = L-aspartate + NH3 Glycosylasparaginase catalyses: N4-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H(2)O = N-acetyl-beta-glucosaminylamine + L-aspartate cleaving the GlcNAc-Asn bond that links oligosaccharides to asparagine in N-linked glycoproteins. The enzyme is composed of two non-identical alpha/beta subunits joined by strong non-covalent forces and has one glycosylation site located in the alpha subunit [] and plays a major role in the degradation of glycoproteins.; GO: 0016787 hydrolase activity; PDB: 1APY_D 1APZ_C 2GEZ_E 2GL9_B 2GAC_D 2GAW_C 1AYY_A 1P4V_C 9GAF_A 1P4K_A ....
Probab=34.32 E-value=31 Score=32.75 Aligned_cols=25 Identities=40% Similarity=0.694 Sum_probs=22.8
Q ss_pred CceEEEEEcCCCCeEEEeccCCCcc
Q 024472 133 GTVGCVAVDNQGNLAAATSTGGLVN 157 (267)
Q Consensus 133 dTVGaVa~D~~G~iaaatSTGG~~~ 157 (267)
+++|+|++|.+|+++.+.+|.+++.
T Consensus 275 ~~~GvIav~~~G~~~~~~n~~~m~~ 299 (319)
T PF01112_consen 275 GTGGVIAVDKKGNIGIAFNSPGMFR 299 (319)
T ss_dssp TSEEEEEEETTS-EEEEESSSCEEE
T ss_pred CceEEEEEcCCCCEEEEEecCccee
Confidence 8999999999999999999999886
No 42
>PRK12897 methionine aminopeptidase; Reviewed
Probab=33.65 E-value=77 Score=28.22 Aligned_cols=42 Identities=12% Similarity=0.011 Sum_probs=32.3
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
...+..+.+++|++++++.++.|.+.-|.-.++-+.+++..+
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~ 159 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGF 159 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCC
Confidence 344555899999999999999998877776666667776653
No 43
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=33.37 E-value=74 Score=20.38 Aligned_cols=24 Identities=29% Similarity=0.309 Sum_probs=19.9
Q ss_pred CCceEEEEEcCCCCeEEEeccCCC
Q 024472 132 LGTVGCVAVDNQGNLAAATSTGGL 155 (267)
Q Consensus 132 ~dTVGaVa~D~~G~iaaatSTGG~ 155 (267)
.+..-.|++|..||+=.+.+|.+.
T Consensus 12 ~~~~~~IavD~~GNiYv~G~T~~~ 35 (38)
T PF06739_consen 12 QDYGNGIAVDSNGNIYVTGYTNGN 35 (38)
T ss_pred ceeEEEEEECCCCCEEEEEeecCC
Confidence 467889999999999888777763
No 44
>PRK10226 isoaspartyl peptidase; Provisional
Probab=32.87 E-value=44 Score=31.76 Aligned_cols=28 Identities=32% Similarity=0.513 Sum_probs=24.0
Q ss_pred CCceEEEEEcCCCCeEEEeccCCCcccc
Q 024472 132 LGTVGCVAVDNQGNLAAATSTGGLVNKM 159 (267)
Q Consensus 132 ~dTVGaVa~D~~G~iaaatSTGG~~~K~ 159 (267)
.++.|.|++|.+|+++++.+|.|+..-+
T Consensus 272 gg~gG~Iavd~~G~~~~~~nt~~M~~~~ 299 (313)
T PRK10226 272 GGSGGLIAIDHEGNVALPFNTEGMYRAW 299 (313)
T ss_pred CCceEEEEEcCCCCEEEEeCCcccceEE
Confidence 3567999999999999999999986544
No 45
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=32.72 E-value=1.1e+02 Score=26.68 Aligned_cols=43 Identities=19% Similarity=0.186 Sum_probs=36.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 21 ERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 21 ~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
+...+..+.+.++.+++.+.+|.|.+.-|.-.++.+.+++..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~ 150 (238)
T cd01086 108 EEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGY 150 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCc
Confidence 3455677888899999999999999999998888889988754
No 46
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=31.19 E-value=1.2e+02 Score=26.67 Aligned_cols=41 Identities=17% Similarity=0.113 Sum_probs=33.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhC
Q 024472 21 ERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENN 61 (267)
Q Consensus 21 ~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~ 61 (267)
+...+..+.++++.+++++.+|.|.+.-|.-.++.+.+++.
T Consensus 103 ~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~ 143 (243)
T cd01087 103 DEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEG 143 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 34566778999999999999999999888877777777654
No 47
>TIGR01354 cyt_deam_tetra cytidine deaminase, homotetrameric. This small, homotetrameric zinc metalloprotein is found in humans and most bacteria. A related, homodimeric form with a much larger subunit is found in E. coli and in Arabidopsis. Both types may act on deoxycytidine as well as cytidine.
Probab=31.03 E-value=1.2e+02 Score=24.64 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=27.7
Q ss_pred HHHHHHHHHhcC---CCCceEEEEecCCccEEEeecCCCc
Q 024472 211 KEASAYVVEECV---PRGNVGLIAVSASGEVTMPFNTTGM 247 (267)
Q Consensus 211 ~eA~~~~i~~~~---~~~~~GvI~v~~~G~~~~~~nt~~m 247 (267)
-+++..+++... .+...|.++++++|++..++|.+.-
T Consensus 4 ~~~a~~a~~~ay~PyS~~~vgAa~~~~~G~i~~G~n~e~~ 43 (127)
T TIGR01354 4 FKAAQEARKNAYAPYSNFKVGAALLTKDGRIFTGVNVENA 43 (127)
T ss_pred HHHHHHHHHhcCCCcCCCeEEEEEEeCCCCEEEEEeeccc
Confidence 345555555443 4678999999999999999998864
No 48
>PLN02937 Putative isoaspartyl peptidase/L-asparaginase
Probab=30.85 E-value=47 Score=32.80 Aligned_cols=25 Identities=24% Similarity=0.460 Sum_probs=23.5
Q ss_pred CceEEEEecCCccEEEeecCCCcee
Q 024472 225 GNVGLIAVSASGEVTMPFNTTGMFR 249 (267)
Q Consensus 225 ~~~GvI~v~~~G~~~~~~nt~~m~~ 249 (267)
.++|+|++|.+|++..+.+|-++.+
T Consensus 228 dTVGaValD~~G~iAAaTSTGG~~~ 252 (414)
T PLN02937 228 DTVGVICVDSEGNIASGASSGGIAM 252 (414)
T ss_pred CCEEEEEEeCCCCEEEEECCCcccc
Confidence 7999999999999999999999876
No 49
>cd04701 Asparaginase_2 L-Asparaginase type 2. L-Asparaginase hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzyme undergoes an autoproteolytic cleavage into alpha and beta subunits to expose a threonine residue which becomes the N-terminal residue of the beta subunit. The threonine residue plays a central role in hydrolase activity. Some asparaginases can also hydrolyze L-glutamine and are termed glutaminase-asparaginase. This is a member of the Ntn-hydrolase superfamily.
Probab=30.76 E-value=49 Score=30.66 Aligned_cols=28 Identities=39% Similarity=0.564 Sum_probs=24.3
Q ss_pred CCceEEEEEcCCCCeEEEeccCCCcccc
Q 024472 132 LGTVGCVAVDNQGNLAAATSTGGLVNKM 159 (267)
Q Consensus 132 ~dTVGaVa~D~~G~iaaatSTGG~~~K~ 159 (267)
.++.|.|++|.+|+++.+.+|.++.+-+
T Consensus 228 ~~~~GiIaid~~G~~~~~~nt~~m~~a~ 255 (260)
T cd04701 228 GGDGGLIAVDARGNVAMPFNTGGMYRGW 255 (260)
T ss_pred CCceEEEEEcCCccEEEEeCCCccEEEE
Confidence 4679999999999999999999887543
No 50
>cd04512 Ntn_Asparaginase_2_like Ntn-hydrolase superfamily, L-Asparaginase type 2-like enzymes. This family includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoprotein. Taspase1 catalyzes the cleavage of the Mix Lineage Leukemia (MLL) nuclear protein and transcription factor TFIIA. L-Asparaginase type 2 hydrolyzes L-asparagine to L-aspartate and ammonia. The proenzymes of this family undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue.
Probab=30.12 E-value=54 Score=30.16 Aligned_cols=27 Identities=37% Similarity=0.577 Sum_probs=23.3
Q ss_pred CCCceEEEEEcCCCCeEEEeccCCCcc
Q 024472 131 QLGTVGCVAVDNQGNLAAATSTGGLVN 157 (267)
Q Consensus 131 ~~dTVGaVa~D~~G~iaaatSTGG~~~ 157 (267)
...+.|.|++|.+|+.+.+.+|.++.+
T Consensus 219 ~~~~~G~Ia~d~~G~~~~a~~~~~m~~ 245 (248)
T cd04512 219 KGGQGGVIAVDSKGEFGAAFNTAGMTV 245 (248)
T ss_pred cCCeEEEEEEeCCCCEEEEECcCCceE
Confidence 347889999999999999999988654
No 51
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=30.05 E-value=1.5e+02 Score=26.03 Aligned_cols=40 Identities=15% Similarity=0.208 Sum_probs=34.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCC
Q 024472 23 RQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNP 62 (267)
Q Consensus 23 ~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p 62 (267)
..+..+.+++|.+++++.+|.|.++-|.-.++.+++++..
T Consensus 122 ~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G 161 (228)
T cd01089 122 KADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYG 161 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcC
Confidence 4455677788999999999999999999999999999988
No 52
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=29.40 E-value=1.8e+02 Score=23.83 Aligned_cols=42 Identities=19% Similarity=0.160 Sum_probs=35.3
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
...+..+.+.++++...+.++.|.+..|.-.++.+.+++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~ 144 (207)
T cd01066 103 EQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGL 144 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCc
Confidence 455667788888889999999999999998888899998753
No 53
>cd04703 Asparaginase_2_like A subfamily of the L-Asparaginase type 2-like enzymes. The wider family, a member of the Ntn-hydrolase superfamily, includes Glycosylasparaginase, Taspase 1 and L-Asparaginase type 2 enzymes. The proenzymes undergo autoproteolytic cleavage before a threonine to generate alpha and beta subunits. The threonine becomes the N-terminal residue of the beta subunit and is the catalytic residue.
Probab=28.12 E-value=48 Score=30.46 Aligned_cols=26 Identities=31% Similarity=0.276 Sum_probs=22.7
Q ss_pred CCCceEEEEEcCCCCeEEEeccCCCcc
Q 024472 131 QLGTVGCVAVDNQGNLAAATSTGGLVN 157 (267)
Q Consensus 131 ~~dTVGaVa~D~~G~iaaatSTGG~~~ 157 (267)
...+.|.|++|. |+++++.+|-++.+
T Consensus 218 ~~~~~G~Iavd~-G~~~~~~~s~~m~~ 243 (246)
T cd04703 218 TGVTAGVIAVDP-EEEGAAYSSAAMQT 243 (246)
T ss_pred cCCceEEEEECC-CceEEEeCchhhhh
Confidence 357899999999 99999999988764
No 54
>PRK12318 methionine aminopeptidase; Provisional
Probab=27.98 E-value=1.7e+02 Score=27.13 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=35.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
...+..+.+++|.+.+++.+|.|.+.-|.-.++...+++..+
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~ 200 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGF 200 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 455678889999999999999999999988888888887543
No 55
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=26.71 E-value=1.7e+02 Score=27.04 Aligned_cols=41 Identities=10% Similarity=0.097 Sum_probs=35.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNP 62 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p 62 (267)
...+..+..++|++++.+.++.|.+.-|.-.++-+++++.+
T Consensus 101 ~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G 141 (291)
T cd01088 101 KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYG 141 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcC
Confidence 34557789999999999999999999998888888888874
No 56
>PLN02402 cytidine deaminase
Probab=26.16 E-value=1.8e+02 Score=27.57 Aligned_cols=53 Identities=17% Similarity=0.263 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHhc-------CCCCceEEEEecCCccEEEeecCCCce
Q 024472 196 ARDVAAVMEFKGLSLKEASAYVVEEC-------VPRGNVGLIAVSASGEVTMPFNTTGMF 248 (267)
Q Consensus 196 A~~i~~~~~~~g~~~~eA~~~~i~~~-------~~~~~~GvI~v~~~G~~~~~~nt~~m~ 248 (267)
|.++..++...|.+..+.+...+++. +.++.+|.++++.+|++..+.|-+.=.
T Consensus 10 a~~~~~l~~~~g~~~~~ll~~l~~~A~~~AyaPYS~F~VGAa~l~~~G~i~~GvNVEnas 69 (303)
T PLN02402 10 ASEAESMAKQSGLTVLQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRIFLGVNLEFPG 69 (303)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCCCCeeeEEEEeCCCCEEEEEeeecCC
Confidence 34444555446888777666655431 247899999999999999998877543
No 57
>PF08988 DUF1895: Protein of unknown function (DUF1895); InterPro: IPR015081 The YscE protein, produced by the pathogen Yersinia, assumes a secondary structure composed of two anti-parallel alpha-helices separated by a flexible loop. The function of this protein is, as yet, unknown. ; PDB: 1ZW0_B 2P58_A 2UWJ_E 2Q1K_D 3PH0_B.
Probab=25.74 E-value=2.2e+02 Score=20.92 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=27.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHH---------HHHHHHHHHHhh
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHAL---------DVVELVVRELEN 60 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~sal---------dAV~~av~~lEd 60 (267)
...+...-|..|...-.+.|..|++.. +|+++|+.++|.
T Consensus 15 ~~~~i~~~L~~a~~~vkr~L~~G~~P~eyQq~q~~~~AieAA~~Vie~ 62 (68)
T PF08988_consen 15 EARAIEQQLRQAQSQVKRKLDRGGTPQEYQQLQQQYDAIEAAIAVIET 62 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455667777777777888887654 678888777763
No 58
>PRK14575 putative peptidase; Provisional
Probab=25.22 E-value=1.7e+02 Score=28.31 Aligned_cols=43 Identities=9% Similarity=0.049 Sum_probs=36.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 21 ERRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 21 ~~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
+...+..+.+++|.+++++.+|.|.++-|.-.++...++...+
T Consensus 285 ~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~ 327 (406)
T PRK14575 285 EITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGL 327 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCC
Confidence 3455667889999999999999999999998888888888643
No 59
>PRK05578 cytidine deaminase; Validated
Probab=25.15 E-value=1.5e+02 Score=24.34 Aligned_cols=38 Identities=18% Similarity=0.156 Sum_probs=28.4
Q ss_pred HHHHHHHHhcC---CCCceEEEEecCCccEEEeecCCCcee
Q 024472 212 EASAYVVEECV---PRGNVGLIAVSASGEVTMPFNTTGMFR 249 (267)
Q Consensus 212 eA~~~~i~~~~---~~~~~GvI~v~~~G~~~~~~nt~~m~~ 249 (267)
++++.+++..+ .++.+|..+++.+|++..+.|-++..+
T Consensus 8 ~~a~~~~~~ay~PyS~f~Vgaa~~~~~G~i~~G~nvEna~~ 48 (131)
T PRK05578 8 EAAIEASEKAYAPYSKFPVGAALLTDDGRIYTGCNIENASY 48 (131)
T ss_pred HHHHHHHHhcCCCcCCCceEEEEEeCCCCEEEEEEeeCccc
Confidence 44555554433 467899999999999999999987654
No 60
>PRK15173 peptidase; Provisional
Probab=25.01 E-value=1.7e+02 Score=27.34 Aligned_cols=42 Identities=7% Similarity=0.022 Sum_probs=35.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
...+..+.++++.+++++.+|.|.+.-|.-.++.+.+++..+
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~ 244 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGL 244 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCC
Confidence 445567899999999999999999999888888888988643
No 61
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.95 E-value=1.3e+02 Score=23.52 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHhc-CC-CHHHHHHHHHHHHhh
Q 024472 28 AALRHCLDIGVDALKS-QK-HALDVVELVVRELEN 60 (267)
Q Consensus 28 ~~l~~a~~~~~~~L~~-g~-saldAV~~av~~lEd 60 (267)
+-+|+|++.+.+.|++ |. .++.|+ .|+..||+
T Consensus 33 RNIRraA~~a~e~L~~e~e~p~vRaA-taIsiLee 66 (93)
T COG1698 33 RNIRRAAEEAKEALNNEGESPAVRAA-TAISILEE 66 (93)
T ss_pred HHHHHHHHHHHHHHhCCCCCchhHHH-HHHHHHHH
Confidence 3578899999999987 43 455554 34888886
No 62
>PRK12896 methionine aminopeptidase; Reviewed
Probab=24.94 E-value=1.9e+02 Score=25.53 Aligned_cols=42 Identities=12% Similarity=0.067 Sum_probs=34.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNPN 63 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~ 63 (267)
...+..+.+++|.+++.+.+|.|.+.-|.-.++-+.+++..+
T Consensus 124 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~ 165 (255)
T PRK12896 124 EAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 344556778889999999999999999988888888888644
No 63
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=23.85 E-value=2.1e+02 Score=26.51 Aligned_cols=39 Identities=8% Similarity=0.106 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCC
Q 024472 24 QPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNP 62 (267)
Q Consensus 24 ~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p 62 (267)
.+..+.+++|++++.+.++.|-+.-|.-.++-+++++.+
T Consensus 107 ~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G 145 (295)
T TIGR00501 107 DNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYG 145 (295)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 457788999999999999999999988888778888854
No 64
>cd04514 Taspase1_like Taspase1_like domains; Taspase1 catalyzes the cleavage of the mix lineage leukemia (MLL) nuclear protein and transcription factor TFIIA. Taspase1 is a threonine aspartase, a member of the Ntn hydrolase superfamily and the type 2 asparaginase family. A threonine residue acts as the active site nucleophile in both endopeptidease and protease activities to cleave polypeptide substrates after an aspartate residue. The Taspase1 proenzyme undergoes autoproteolysis into alpha and beta subunits. The N-terminal residue of the beta subunit is a threonine which is the active catalytic residue. The active enzyme is a heterotetramer.
Probab=22.51 E-value=85 Score=29.73 Aligned_cols=36 Identities=17% Similarity=0.331 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCCCceEEEEecCCccEEEeecCCCcee
Q 024472 213 ASAYVVEECVPRGNVGLIAVSASGEVTMPFNTTGMFR 249 (267)
Q Consensus 213 A~~~~i~~~~~~~~~GvI~v~~~G~~~~~~nt~~m~~ 249 (267)
|-+.+.+.-+ ..++|++++|.+|++..+.+|-++++
T Consensus 129 A~~fA~~~G~-~dTVGaValD~~G~~aaatSTGG~~~ 164 (303)
T cd04514 129 ARQWAKSHGI-LDTVGAVCVDKEGNIAAGVSSGGIAL 164 (303)
T ss_pred HHHHHHHhCC-CCCEEEEEEeCCCCEEEEECCCcccC
Confidence 3334443334 58999999999999999999999866
No 65
>PRK12411 cytidine deaminase; Provisional
Probab=22.01 E-value=1.8e+02 Score=23.99 Aligned_cols=39 Identities=13% Similarity=0.093 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcC---CCCceEEEEecCCccEEEeecCCCcee
Q 024472 211 KEASAYVVEECV---PRGNVGLIAVSASGEVTMPFNTTGMFR 249 (267)
Q Consensus 211 ~eA~~~~i~~~~---~~~~~GvI~v~~~G~~~~~~nt~~m~~ 249 (267)
-++++.+++..+ .++.+|..+++++|++..+.|.+.-.+
T Consensus 7 ~~~a~~~~~~ay~pyS~~~VgAa~~t~~G~i~~G~nvEn~s~ 48 (132)
T PRK12411 7 IQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASY 48 (132)
T ss_pred HHHHHHHHHhcCCCccCCceEEEEEeCCCCEEEEEEeecCCC
Confidence 345555555433 468899999999999999999887544
No 66
>PRK08671 methionine aminopeptidase; Provisional
Probab=20.16 E-value=3.2e+02 Score=25.12 Aligned_cols=41 Identities=5% Similarity=0.138 Sum_probs=34.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCC
Q 024472 22 RRQPREAALRHCLDIGVDALKSQKHALDVVELVVRELENNP 62 (267)
Q Consensus 22 ~~~~~~~~l~~a~~~~~~~L~~g~saldAV~~av~~lEd~p 62 (267)
...+..+.+++|++++.+.+|.|.+.-|.-.++-+++++..
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G 142 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYG 142 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 34557788999999999999999999888877777888754
No 67
>PRK06848 hypothetical protein; Validated
Probab=20.11 E-value=2e+02 Score=23.90 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=28.1
Q ss_pred HHHHHHHHhcC--CCCceEEEEecCCccEEEeecCCCcee
Q 024472 212 EASAYVVEECV--PRGNVGLIAVSASGEVTMPFNTTGMFR 249 (267)
Q Consensus 212 eA~~~~i~~~~--~~~~~GvI~v~~~G~~~~~~nt~~m~~ 249 (267)
++++++++... ..+.+|..++.++|++..+.|-+...+
T Consensus 12 ~~A~~a~~~ay~ps~f~VgAa~l~~~G~i~~G~NvEnas~ 51 (139)
T PRK06848 12 KAAEKVIEKRYRNDWHHVGAALRTKTGRIYAAVHLEAYVG 51 (139)
T ss_pred HHHHHHHHhccCCCCCcEEEEEEeCCCCEEEEEEeecCCC
Confidence 44445554433 367899999999999999999987544
Done!