Query 024475
Match_columns 267
No_of_seqs 169 out of 755
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 04:52:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024475.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024475hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1889 Putative phosphoinosit 100.0 7.1E-65 1.5E-69 478.0 21.5 253 11-267 1-254 (579)
2 PF02383 Syja_N: SacI homology 100.0 2.6E-61 5.5E-66 444.2 16.5 201 66-266 1-220 (319)
3 KOG1888 Putative phosphoinosit 100.0 6.3E-57 1.4E-61 438.7 20.2 250 12-267 15-294 (868)
4 COG5329 Phosphoinositide polyp 100.0 1.6E-52 3.5E-57 399.6 26.6 201 61-267 55-266 (570)
5 KOG1890 Phosphoinositide phosp 100.0 3.1E-52 6.8E-57 394.7 15.3 244 15-267 1-300 (949)
6 KOG0566 Inositol-1,4,5-triphos 100.0 5.9E-44 1.3E-48 352.0 18.9 200 59-267 53-268 (1080)
7 PF15214 PXT1: Peroxisomal tes 72.8 0.78 1.7E-05 30.4 -0.8 10 173-182 42-51 (51)
8 KOG0566 Inositol-1,4,5-triphos 47.6 32 0.00069 36.5 5.0 39 76-114 79-119 (1080)
9 COG1207 GlmU N-acetylglucosami 43.0 17 0.00036 35.3 2.1 31 221-256 331-361 (460)
10 PHA02762 hypothetical protein; 36.2 51 0.0011 22.5 3.1 34 210-243 6-41 (62)
11 PF12135 Sialidase_penC: Siali 27.6 94 0.002 17.8 2.8 21 244-264 4-25 (25)
12 PF14692 DUF4462: Domain of un 26.4 26 0.00056 20.7 0.3 14 171-184 2-15 (28)
13 PF10538 ITAM_Cys-rich: Immuno 20.2 1.2E+02 0.0025 17.2 2.1 19 9-27 2-20 (24)
No 1
>KOG1889 consensus Putative phosphoinositide phosphatase [Lipid transport and metabolism]
Probab=100.00 E-value=7.1e-65 Score=478.02 Aligned_cols=253 Identities=53% Similarity=0.879 Sum_probs=234.4
Q ss_pred ccceEEEEEECCEEEEEeCCCCCcceEEEECCCCceeeecCCCccccCCCceeeEEEEEEEEEEEcCceEEEEEeceEEE
Q 024475 11 LYTRMRLWEFPDQFVVEPTDGSSGSALAISRADGSMNLIHEVPECSILRVPKIRTIFGVVGVLKLLAGSYLIVITERECV 90 (267)
Q Consensus 11 ~~~~~~l~~t~~~~~i~~~~~~~~~~L~IdR~~g~i~~~~~~~~~~~~~~~~~~~~~GilG~i~l~~~~yLvvIt~~~~v 90 (267)
.|+.++||+.|+.|+|+|.|+..+.+|.|||.++.+++.+......+.. ....++|++|.|+|..+.||+|||++..+
T Consensus 1 ~~~~l~l~~~pe~~~~e~~dg~gd~~l~i~r~~~~~~~i~~~~~~v~~~--~~~~i~gv~G~ikL~~~~ylivvt~~~~v 78 (579)
T KOG1889|consen 1 IYENLKLYENPEQFVIEPADGGGDSCLTIDRVDGVMKVIDAVKKPVPSS--VIRSIFGVLGMIKLLAGSYLIVVTEAESV 78 (579)
T ss_pred CCcceEEEEccceEEEEecCCCCceEEEEeccCCceEeeccccccCccc--ceeeeeeeeeEEEEecCcEEEEEEehhhh
Confidence 4789999999999999999887788999999999998887544322222 56789999999999999999999999999
Q ss_pred EeeCCceEEEEEeEEEEeCCCCCCCCchhhhhhhHHHHHHhhcccCCCcEEEeccCCccchhhhccccCCCCCCCccccC
Q 024475 91 GSYLGHPIYKVASLKILPCDHSLNNSSAEQKKVEAEFSCLLKLAERTPGLYFSYDTNLTLSVQRLNTLGDESKLLPLWRQ 170 (267)
Q Consensus 91 g~i~g~~Iy~I~~~~~ipl~~~~~~~~~~~~~~E~~~~~llk~~~~~~~fYfS~~~DLT~s~Q~~~~~~~~~~~~~~~~~ 170 (267)
|.+.||+||+|+.+++||+... +++.++.+.|..|.++|+.++++++|||||+||||+|+||++...++....|+|++
T Consensus 79 g~~~gh~i~~v~~~~iIp~k~~--~~~~~q~k~~~~~~~lL~~~lkt~~fyfSyt~dlT~slqrl~~~~~~~~~~~l~~~ 156 (579)
T KOG1889|consen 79 GQFNGHVIYRITDFEIIPYKKT--NLTEEQIKMETEFSNLLSHVLKTGGFYFSYTYDLTNSLQRLHENADEGKALSLWRR 156 (579)
T ss_pred ccccCcceEEEeeeeEEEeecC--CchHHHHHHHHHHHHHHHHHHhcCceEEEEEEccchHHHhhhhccccccccchhhh
Confidence 9999999999999999999876 56677888888999999999999999999999999999999888877778889999
Q ss_pred CCCceeeehhhhHHHHhC-CCCCceeeeEEeeEEeEEEEEeCceEEEEEEEeeecCCCCcccccccCCCCCceeeeEeEE
Q 024475 171 AEPRFLWNNYLMEALIDN-KLDPFLLPVIQGSFHHFQTAIGRDIIDVTLIARRCTRRNGTRMWRRGADSDGYVANFVETE 249 (267)
Q Consensus 171 ~d~rF~WN~~l~~~l~~~-~~~~~~~p~IqGfv~~~~~~~~~~~~~~~LISRRS~~raGtRy~~RGiD~~G~vANfVETE 249 (267)
+|+||+||.+|++.|++. +.+.|++|+||||+++..+.++++.+.++||||||+.||||||++||+|.+||||||||||
T Consensus 157 ad~rFlwN~~ll~~~~~~~~~~~f~lpvi~Gf~~~~~~~i~~~tv~l~lIsRRs~~RaGtRyfrRG~D~~G~vaNfvETE 236 (579)
T KOG1889|consen 157 ADKRFLWNGYLLEDLIDNAKVDLFILPVIQGFIGSVDVGINGKTVDLTLISRRSIRRAGTRYFRRGSDEDGYVANFVETE 236 (579)
T ss_pred cccceeecchhHHHHhcCccccchhhHHhhhhhheeeEeeccceEEEEEeehhhhhccceeEEecccCCcccccccceee
Confidence 999999999999999998 4889999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCeEEEEEEecCC
Q 024475 250 QVVQMNGFMASFVQVTFL 267 (267)
Q Consensus 250 qIv~~~~~~~SfvQiRG~ 267 (267)
|||..+++.+||||+||.
T Consensus 237 QIv~~~~~~~SFvQ~RGS 254 (579)
T KOG1889|consen 237 QIVEYNGHTTSFVQTRGS 254 (579)
T ss_pred EEEEecCcEEEEEEeccC
Confidence 999999999999999993
No 2
>PF02383 Syja_N: SacI homology domain; InterPro: IPR002013 Synaptic vesicles are recycled with remarkable speed and precision in nerve terminals. A major recycling pathway involves clathrin-mediated endocytosis at endocytic zones located around sites of release. Different 'accessory' proteins linked to this pathway have been shown to alter the shape and composition of lipid membranes, to modify membrane-coat protein interactions, and to influence actin polymerisation. These include the GTPase dynamin, the lysophosphatidic acid acyl transferase endophilin, and the phosphoinositide phosphatase synaptojanin []. The recessive suppressor of secretory defect in yeast Golgi and yeast actin function belongs to this family. This protein may be involved in the coordination of the activities of the secretory pathway and the actin cytoskeleton. Human synaptojanin which may be localised on coated endocytic intermediates in nerve terminals also belongs to this family.; GO: 0042578 phosphoric ester hydrolase activity; PDB: 3LWT_X.
Probab=100.00 E-value=2.6e-61 Score=444.24 Aligned_cols=201 Identities=44% Similarity=0.708 Sum_probs=149.2
Q ss_pred EEEEEEEEEEcCceEEEEEeceEEEEeeC-CceEEEEEeEEEEeCCCCCCCCc------hhhhhhhHHHHHHhhcccCCC
Q 024475 66 IFGVVGVLKLLAGSYLIVITERECVGSYL-GHPIYKVASLKILPCDHSLNNSS------AEQKKVEAEFSCLLKLAERTP 138 (267)
Q Consensus 66 ~~GilG~i~l~~~~yLvvIt~~~~vg~i~-g~~Iy~I~~~~~ipl~~~~~~~~------~~~~~~E~~~~~llk~~~~~~ 138 (267)
|+||+|+|++.++.||+|||+++.||.++ +|+||+|+++++||+........ .++.++|.+++++|+.++.++
T Consensus 1 ~~GilG~i~l~~~~yL~vIt~~~~v~~i~~~h~Iy~I~~v~~i~l~~~~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~ 80 (319)
T PF02383_consen 1 CFGILGIIRLLSGPYLVVITESELVGTIPGGHDIYRITKVEFIPLPSSSSSSSLLNSEQSEQSRDEQRYLSLLKKLLSSG 80 (319)
T ss_dssp --EEEEEEEETTEEEEEEEEEEEEEEEETT-EEEEEEEEEEEEES-TT---------------HHHHHHHHHHHHHHHH-
T ss_pred CceEEEEEEECCCcEEEEEEecEEEEEeCCCcEEEEEeEEEEEEcCCCccccccccccccccchHHHHHHHHHHHHhcCC
Confidence 68999999999999999999999999998 59999999999999988754433 235677889999999999999
Q ss_pred cEEEeccCCccchhhhccccCCC-----CCCCccccCCCCceeeehhhhHHHHhCC--CCCceeeeEEeeEEeEEEEEe-
Q 024475 139 GLYFSYDTNLTLSVQRLNTLGDE-----SKLLPLWRQAEPRFLWNNYLMEALIDNK--LDPFLLPVIQGSFHHFQTAIG- 210 (267)
Q Consensus 139 ~fYfS~~~DLT~s~Q~~~~~~~~-----~~~~~~~~~~d~rF~WN~~l~~~l~~~~--~~~~~~p~IqGfv~~~~~~~~- 210 (267)
+|||||+||||+++|++...... ....++|+.+|++|+||++|+++|++.+ .+.||+|+|||||++..+.+.
T Consensus 81 ~fYfS~~~DLT~slQ~~~~~~~~~~~~~~~~~~~~~~~~~~F~WN~~l~~~~~~~~~~~~~~~~~iiqG~v~~~~~~~~~ 160 (319)
T PF02383_consen 81 SFYFSYTYDLTNSLQRQFENNSQSSTESSSSHSLWDRADDRFFWNRHLLKPFIEFGPDLDRWCLPIIQGFVESRQIEINS 160 (319)
T ss_dssp --EE-SSS-TTS-HHHHHHH-S------------GGGS-TTT-TTTGGGHHHHHHHGGGGGG----BSSEEEEEEEEET-
T ss_pred CEEEECCCChhHhhcccccccccccccccccccccccCCCccCchHHHHHHHHhhCCCcccEEEEEEeeeEEEEEeeeec
Confidence 99999999999999998754321 1234788999999999999999999887 889999999999999999998
Q ss_pred CceEEEEEEEeeecCCCCcccccccCCCCCceeeeEeEEEEEE-e-C--CeEEEEEEecC
Q 024475 211 RDIIDVTLIARRCTRRNGTRMWRRGADSDGYVANFVETEQVVQ-M-N--GFMASFVQVTF 266 (267)
Q Consensus 211 ~~~~~~~LISRRS~~raGtRy~~RGiD~~G~vANfVETEqIv~-~-~--~~~~SfvQiRG 266 (267)
+..++++||||||++||||||++||||++|||||||||||||+ . + +.++||||+||
T Consensus 161 ~~~~~~~lIsRrS~~r~GtRy~~RGid~~G~vANfVEtEqiv~~~~~~~~~~~SfvqiRG 220 (319)
T PF02383_consen 161 GKNFQLTLISRRSCRRAGTRYNRRGIDDDGNVANFVETEQIVYIYNNQSGHIFSFVQIRG 220 (319)
T ss_dssp TEEEEEEEEEEE-----SSS--SSSB-TTS--S-EEEEEEEEEEE-T--EEEEEEEEEEE
T ss_pred CceEEEEEEEeEeccccccccccccccccCccceeEEEEEEEEEcCCCCccEEEEeEecC
Confidence 9999999999999999999999999999999999999999999 5 5 78999999999
No 3
>KOG1888 consensus Putative phosphoinositide phosphatase [Lipid transport and metabolism]
Probab=100.00 E-value=6.3e-57 Score=438.67 Aligned_cols=250 Identities=30% Similarity=0.475 Sum_probs=213.5
Q ss_pred cceEEEEEECCEEEEEeCCCCCc--ceEEEECCCCceeee--cC---------------CCc--cccCCCceeeEEEEEE
Q 024475 12 YTRMRLWEFPDQFVVEPTDGSSG--SALAISRADGSMNLI--HE---------------VPE--CSILRVPKIRTIFGVV 70 (267)
Q Consensus 12 ~~~~~l~~t~~~~~i~~~~~~~~--~~L~IdR~~g~i~~~--~~---------------~~~--~~~~~~~~~~~~~Gil 70 (267)
..++.||+|..+||+++.+++++ ++|+|||.++. .+. +. +.. .+.+...++..+||||
T Consensus 15 ~~k~~lyETrar~YlIGsn~s~t~yrVLkIDrt~p~-~Lni~ed~~~yt~~Ei~elL~~i~~g~~~tgGl~~~t~ayGIl 93 (868)
T KOG1888|consen 15 LQKFVLYETRARFYLIGSNNSETRYRVLKIDRTEPS-ELNISEDSVVYTSEEIRELLARISEGNRATGGLKKVTSAYGIL 93 (868)
T ss_pred eeEEEEEEecceEEEEeecCCCceEEEEEeccCCch-hhccCCCccccCHHHHHHHHHHHhcCCccCCceeeeeeeeeee
Confidence 48999999999999999887653 58999999976 321 10 111 1224556888999999
Q ss_pred EEEEEcCceEEEEEeceEEEEeeCCceEEEEEeEEEEeCCCCCCCCchhhhhhhHHHHHHhhcccCCCcEEEeccCCccc
Q 024475 71 GVLKLLAGSYLIVITERECVGSYLGHPIYKVASLKILPCDHSLNNSSAEQKKVEAEFSCLLKLAERTPGLYFSYDTNLTL 150 (267)
Q Consensus 71 G~i~l~~~~yLvvIt~~~~vg~i~g~~Iy~I~~~~~ipl~~~~~~~~~~~~~~E~~~~~llk~~~~~~~fYfS~~~DLT~ 150 (267)
|++++..++||++||++..||.|+||.||+|.++++||+...... .+.++|++++++++.++.+++|||||+||||+
T Consensus 94 GfvkFle~YYLlliTkr~~ia~iggH~VY~I~es~mI~I~~~~vq---~~~~~e~r~~r~fq~vDLt~~FYFSYSYditr 170 (868)
T KOG1888|consen 94 GFVKFLEGYYLLLITKRRQIADIGGHAVYTIDESQMIPIPNDTVQ---PNHANEARYLRYFQNVDLTKDFYFSYSYDITR 170 (868)
T ss_pred eEEEecCceEEEEEEcccccccccCceeEEEccceEEEccCCCcC---CCCccHHHHHHHHhhcccccceeEEeehhhhh
Confidence 999999999999999999999999999999999999999876432 22578999999999999999999999999999
Q ss_pred hhhhccccCCCCCCCcccc--CCCCceeeehhhhHHHHhCCCC-CceeeeEEeeEEeEEEEEeCceEEEEEEEeeecCCC
Q 024475 151 SVQRLNTLGDESKLLPLWR--QAEPRFLWNNYLMEALIDNKLD-PFLLPVIQGSFHHFQTAIGRDIIDVTLIARRCTRRN 227 (267)
Q Consensus 151 s~Q~~~~~~~~~~~~~~~~--~~d~rF~WN~~l~~~l~~~~~~-~~~~p~IqGfv~~~~~~~~~~~~~~~LISRRS~~ra 227 (267)
|+|.+....+. ..+.++ .+|++|+||.+|++|+...... .|++.++|||+++..+.+.|+.+.++||+|||++.|
T Consensus 171 slQ~N~~~~~~--~~~~~~~~~~~~~FVWN~~Ll~pir~~~~~~~W~v~lvhGf~~Q~~lsi~Gr~~~vtLiARRSr~fA 248 (868)
T KOG1888|consen 171 SLQKNILRSRL--GGPDYEKLEADEMFVWNSFLLQPIRSILLNTDWTVALVHGFFKQSPLSISGRDFYVTLIARRSRHFA 248 (868)
T ss_pred hhccccccccc--CCcchhhhcccceeEehHhHhHHHHHhccchhHHHHHHhhhhccceehhcCceeEEEEEEecccccc
Confidence 99987543221 122222 4678999999999999987766 899999999999999999999999999999999999
Q ss_pred CcccccccCCCCCceeeeEeEEEEEEeC------CeEEEEEEecCC
Q 024475 228 GTRMWRRGADSDGYVANFVETEQVVQMN------GFMASFVQVTFL 267 (267)
Q Consensus 228 GtRy~~RGiD~~G~vANfVETEqIv~~~------~~~~SfvQiRG~ 267 (267)
||||.+||+|..|+|||+|||||||+.. +.++||||.||-
T Consensus 249 GTRfLKRG~N~~G~VANeVETEQIV~d~~~~~~~~~~sS~VQ~RGS 294 (868)
T KOG1888|consen 249 GTRFLKRGANSCGDVANEVETEQIVSDDVPGFHAGRISSFVQMRGS 294 (868)
T ss_pred cchHHhccCCCCCCcccceeeeeeEecCcCCCCccceeeeeecccc
Confidence 9999999999999999999999999986 369999999993
No 4
>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-52 Score=399.64 Aligned_cols=201 Identities=37% Similarity=0.585 Sum_probs=179.9
Q ss_pred ceeeEEEEEEEEEEEcCceEEEEEeceEEEEeeCCceEEEEEeEEEEeCCCCCCCCchhhhhhhHHHHH--HhhcccCCC
Q 024475 61 PKIRTIFGVVGVLKLLAGSYLIVITERECVGSYLGHPIYKVASLKILPCDHSLNNSSAEQKKVEAEFSC--LLKLAERTP 138 (267)
Q Consensus 61 ~~~~~~~GilG~i~l~~~~yLvvIt~~~~vg~i~g~~Iy~I~~~~~ipl~~~~~~~~~~~~~~E~~~~~--llk~~~~~~ 138 (267)
....+++|++|+|.+....||++||+++.|+.++||.||+|.+|+|||++.+.+... ...||..+.+ .||.++++|
T Consensus 55 ~~~~~i~g~~Gli~l~~~~yl~~it~~s~v~~~~g~~IykI~~vdfi~l~~~~~d~~--~~~~~~~~~~~~~lk~Lls~g 132 (570)
T COG5329 55 SSAHKIYGVIGLIKLKGDIYLIVITGASLVGVIPGHSIYKILDVDFISLNNNKWDDE--LEEDEANYDKLSELKKLLSNG 132 (570)
T ss_pred ccceeEEeEEEEEEecCcEEEEEEecceEEeeeCCcceEEEeeeEEEEccccccchh--hhhhhhhhhhhhhhhhhhcCC
Confidence 445789999999999999999999999999999999999999999999998766432 2225556655 788899999
Q ss_pred cEEEeccCCccchhhhccccCCCCCCCccccCCCCceeeehhhhHHHHhCC---------CCCceeeeEEeeEEeEEEEE
Q 024475 139 GLYFSYDTNLTLSVQRLNTLGDESKLLPLWRQAEPRFLWNNYLMEALIDNK---------LDPFLLPVIQGSFHHFQTAI 209 (267)
Q Consensus 139 ~fYfS~~~DLT~s~Q~~~~~~~~~~~~~~~~~~d~rF~WN~~l~~~l~~~~---------~~~~~~p~IqGfv~~~~~~~ 209 (267)
.|||||+||||+++|++... ...|.|+++|.+|+||.+|+++|+.+. .+.|++++|+||+++..+.+
T Consensus 133 tFYfS~~~diTn~lQ~~~~~----~~~~~~~~~d~~f~wN~fl~~e~i~~r~~~~~~~k~~~~flt~vIrGf~~t~~~~~ 208 (570)
T COG5329 133 TFYFSYDFDITNSLQKNLSE----GLEASVDRADLIFMWNSFLLEEFINHRSKLSSLEKQFDNFLTTVIRGFAETVDIKV 208 (570)
T ss_pred cEEEecccchhhhhhhcccc----CccccccchhheeecchhhHHHHHhhcccCChhhhcccchheeeeeeeeeeEEEee
Confidence 99999999999999997221 356778899999999999999998753 23599999999999999999
Q ss_pred eCceEEEEEEEeeecCCCCcccccccCCCCCceeeeEeEEEEEEeCCeEEEEEEecCC
Q 024475 210 GRDIIDVTLIARRCTRRNGTRMWRRGADSDGYVANFVETEQVVQMNGFMASFVQVTFL 267 (267)
Q Consensus 210 ~~~~~~~~LISRRS~~raGtRy~~RGiD~~G~vANfVETEqIv~~~~~~~SfvQiRG~ 267 (267)
++..+.++||||||++||||||++||||++||||||||||||+.....++||+|+||-
T Consensus 209 ~~~~i~ltLISR~S~~raGtRy~~RGiDddGnvsnFVETE~Iv~~~~~~fSf~QvRGS 266 (570)
T COG5329 209 GGNTISLTLISRRSSERAGTRYLSRGIDDDGNVSNFVETEQIVTDSQYIFSFTQVRGS 266 (570)
T ss_pred cCceEEEEEEEeehhhcccceeeccccCCCCcccceeeeEEEEEecceEEEEEEecCc
Confidence 9999999999999999999999999999999999999999999999999999999993
No 5
>KOG1890 consensus Phosphoinositide phosphatase SAC1 [Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-52 Score=394.70 Aligned_cols=244 Identities=29% Similarity=0.449 Sum_probs=204.0
Q ss_pred EEEEEECCEEEEEeCCCCCcceEEEECCCCceeeecCCCccccCCCceeeEEEEEEEEEEEcCce--EEEEEeceEEEEe
Q 024475 15 MRLWEFPDQFVVEPTDGSSGSALAISRADGSMNLIHEVPECSILRVPKIRTIFGVVGVLKLLAGS--YLIVITERECVGS 92 (267)
Q Consensus 15 ~~l~~t~~~~~i~~~~~~~~~~L~IdR~~g~i~~~~~~~~~~~~~~~~~~~~~GilG~i~l~~~~--yLvvIt~~~~vg~ 92 (267)
|++|.+++.||++..+ ++||.||.+|++.+.++......+...+...+.|++|.|.|.+.. +|++|.++..||.
T Consensus 1 Meifqt~~hyIl~qge----rslw~~RR~g~~~~kp~~dL~~~dd~~c~G~veg~iGkIsl~~~~~~~L~~v~~~s~Vg~ 76 (949)
T KOG1890|consen 1 MEIFQTPTHYILEQGE----RSLWFDRRNGKVLEKPEEDLEILDDVVCCGNVEGLIGKISLDEQHEPFLFFVVDSSVVGC 76 (949)
T ss_pred CceeecCceeeeeccc----eeeEEeccCCceeeccccchhhccCceEecceeeeEEEEeccccCCceEEEEEeeeeEEE
Confidence 5799999999999654 459999999999887665544445667788899999999999875 9999999999999
Q ss_pred eCC-ceEEEEEeEEEEeCCCCCC-------------------CCch----------------------------hhhhhh
Q 024475 93 YLG-HPIYKVASLKILPCDHSLN-------------------NSSA----------------------------EQKKVE 124 (267)
Q Consensus 93 i~g-~~Iy~I~~~~~ipl~~~~~-------------------~~~~----------------------------~~~~~E 124 (267)
++| |.||+|+++..+.+..+.. +++. |....|
T Consensus 77 l~g~H~v~ki~~i~~ls~~~pd~dl~~ckkhh~~~n~~~~i~Pss~~sKfl~kt~~~iksn~~a~n~kkVk~srEpr~ie 156 (949)
T KOG1890|consen 77 LRGSHSVRKIERIIALSVKSPDTDLSVCKKHHSVSNNNNAITPSSGGSKFLKKTTEKIKSNFAAANTKKVKKSREPRHIE 156 (949)
T ss_pred ecCCceeeeEEEEEEEecCCCCccchhhhhhccccCCCCcccCCCCcchHHHHHHHHHHhhccccchhhhhcccCcchhh
Confidence 976 9999999999998875310 0100 001125
Q ss_pred HHHH-HHhhcccCCCcEEEeccCCccchhhhccccCCCCCCCccccCCCCceeeehhhhHHHHhCCCC--CceeeeEEee
Q 024475 125 AEFS-CLLKLAERTPGLYFSYDTNLTLSVQRLNTLGDESKLLPLWRQAEPRFLWNNYLMEALIDNKLD--PFLLPVIQGS 201 (267)
Q Consensus 125 ~~~~-~llk~~~~~~~fYfS~~~DLT~s~Q~~~~~~~~~~~~~~~~~~d~rF~WN~~l~~~l~~~~~~--~~~~p~IqGf 201 (267)
++++ +++|.+..+.+||||.++|+|+|.||+.....+. .++.|+|||||++|+.+|.+.+.+ .|++|+||||
T Consensus 157 rrlleellK~F~ds~sFYfs~~~DvTns~Qr~~~~~re~-----~s~~ddrFFWNK~Mi~dL~e~~~~D~~wi~PiiQGf 231 (949)
T KOG1890|consen 157 RRLLEELLKLFNDSKSFYFSRSRDVTNSSQRYEFEKREA-----HSTSDDRFFWNKRMIGDLGEAKISDKKWICPIIQGF 231 (949)
T ss_pred HHHHHHHHHHhccccceEEEeecccccHHhhhhhhhccc-----ccCccchhhhHHHHHhhHhhcCCCCccEeehhhhhh
Confidence 5565 5888888899999999999999999975332221 145799999999999999998864 5999999999
Q ss_pred EEeEEEEEeCc---eEEEEEEEeeecCCCCcccccccCCCCCceeeeEeEEEEEEeCCeEEEEEEecCC
Q 024475 202 FHHFQTAIGRD---IIDVTLIARRCTRRNGTRMWRRGADSDGYVANFVETEQVVQMNGFMASFVQVTFL 267 (267)
Q Consensus 202 v~~~~~~~~~~---~~~~~LISRRS~~raGtRy~~RGiD~~G~vANfVETEqIv~~~~~~~SfvQiRG~ 267 (267)
|+..++.+++. -++++||||||++|||+||.+||+|+.||||||||||||+-...+..||||+||.
T Consensus 232 vq~e~lvi~de~~c~ftialiSRRSrhRAG~RYkRRGvDe~gNvANyVETEqil~~~~H~LSFvQ~RGS 300 (949)
T KOG1890|consen 232 VQTEQLVITDEINCYFTIALISRRSRHRAGARYKRRGVDEAGNVANYVETEQILNIFEHELSFVQCRGS 300 (949)
T ss_pred hhhheEEeccccceEEEEEeeechhhhhccchhhhcCcccccchhhhhhHHHHHHhhhceeeEEEeecc
Confidence 99999988765 3889999999999999999999999999999999999999999999999999993
No 6
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.9e-44 Score=351.96 Aligned_cols=200 Identities=31% Similarity=0.463 Sum_probs=163.7
Q ss_pred CCceeeEEEEEEEEEEEcCceEEEEEeceEEEEeeCC-ceEEEEEeEEEEeCCCCCCC--Cchhhhhhh-----HHHHHH
Q 024475 59 RVPKIRTIFGVVGVLKLLAGSYLIVITERECVGSYLG-HPIYKVASLKILPCDHSLNN--SSAEQKKVE-----AEFSCL 130 (267)
Q Consensus 59 ~~~~~~~~~GilG~i~l~~~~yLvvIt~~~~vg~i~g-~~Iy~I~~~~~ipl~~~~~~--~~~~~~~~E-----~~~~~l 130 (267)
...+...+||+||++++.++.++.||+++..++.+.| ..|++|.+++|+++++..+. +-+.....| .+-+..
T Consensus 53 ~~~k~~~~yG~LGll~l~~~~~~~vi~g~~~l~~V~~~~sv~ki~~vdf~~l~~~~~dFi~l~~~~~~~~~~~~~~~~s~ 132 (1080)
T KOG0566|consen 53 LYSKSHDIYGILGLLRLNGGDFVAVISGVSFLAQVTGSESVGKIEDVDFYSLTNTVWDFISLERSSSPEDTLYPKHPCSE 132 (1080)
T ss_pred ccccceeeeeeeEEEEEcCCceEEEeccceEEEEecCCceeccccceeEEEeccchhhheecccCCCCccccccccchHH
Confidence 4456778999999999999998888777777777643 56666666666666554110 000000111 134667
Q ss_pred hhcccCCCcEEEeccCCccchhhhccccCCCCCCCccccCCCCceeeehhhhHHHHhCC--------CCCceeeeEEeeE
Q 024475 131 LKLAERTPGLYFSYDTNLTLSVQRLNTLGDESKLLPLWRQAEPRFLWNNYLMEALIDNK--------LDPFLLPVIQGSF 202 (267)
Q Consensus 131 lk~~~~~~~fYfS~~~DLT~s~Q~~~~~~~~~~~~~~~~~~d~rF~WN~~l~~~l~~~~--------~~~~~~p~IqGfv 202 (267)
|+.++++|+||||.+||||..+|++.... +..|.+|+||++|..+|+..+ .+.|++.+|+|||
T Consensus 133 LrkLLssGsFYfS~~fDlt~~~q~rg~~~---------d~~d~~f~WN~~L~~el~~~~s~~k~l~d~~~~Ll~~irG~v 203 (1080)
T KOG0566|consen 133 LRKLLSSGSFYFSSDFDLTCFAQNRGDQT---------DETDLRFFWNRFLHSELINYRSHLKQLLDCDGFLLTVIRGFV 203 (1080)
T ss_pred HHHHhhCCcEEEeeccchhhHHHhcCCCc---------ccccceeechhHHHHHHHHhhhhhhhccccccHHHHhhhceE
Confidence 88999999999999999999999874221 346899999999999998765 3579999999999
Q ss_pred EeEEEEEeCceEEEEEEEeeecCCCCcccccccCCCCCceeeeEeEEEEEEeCCeEEEEEEecCC
Q 024475 203 HHFQTAIGRDIIDVTLIARRCTRRNGTRMWRRGADSDGYVANFVETEQVVQMNGFMASFVQVTFL 267 (267)
Q Consensus 203 ~~~~~~~~~~~~~~~LISRRS~~raGtRy~~RGiD~~G~vANfVETEqIv~~~~~~~SfvQiRG~ 267 (267)
+.+.+.++...+.++||||.||.|+||||+.||||++||||||||||||+..++.++||+||||-
T Consensus 204 e~~~iy~g~~~~~~~iISR~S~eragtrf~~rGidddG~VanFVETE~iv~~~~~v~Sf~QIRGS 268 (1080)
T KOG0566|consen 204 ETRTIYVGANTARMTLISRLSCERAGTRFNVRGIDDDGNVANFVETEQIVYSDQTVFSFTQIRGS 268 (1080)
T ss_pred EEEEEEeccceeeEEEEEeehhcccCceecccccCCccceeeeeeeEEEEEecCcEEEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999993
No 7
>PF15214 PXT1: Peroxisomal testis-specific protein 1
Probab=72.84 E-value=0.78 Score=30.41 Aligned_cols=10 Identities=60% Similarity=1.258 Sum_probs=8.3
Q ss_pred Cceeeehhhh
Q 024475 173 PRFLWNNYLM 182 (267)
Q Consensus 173 ~rF~WN~~l~ 182 (267)
-||+||.||+
T Consensus 42 LrFfwnnhll 51 (51)
T PF15214_consen 42 LRFFWNNHLL 51 (51)
T ss_pred hhhhhhcccC
Confidence 4999999874
No 8
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=47.63 E-value=32 Score=36.52 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=34.3
Q ss_pred cCceEEEEEeceEEEEeeCCceEEEEEeE--EEEeCCCCCC
Q 024475 76 LAGSYLIVITERECVGSYLGHPIYKVASL--KILPCDHSLN 114 (267)
Q Consensus 76 ~~~~yLvvIt~~~~vg~i~g~~Iy~I~~~--~~ipl~~~~~ 114 (267)
.+-.+|+.||.++.|++|.+-.+|+|++. +|+++..+..
T Consensus 79 ~g~~~l~~V~~~~sv~ki~~vdf~~l~~~~~dFi~l~~~~~ 119 (1080)
T KOG0566|consen 79 SGVSFLAQVTGSESVGKIEDVDFYSLTNTVWDFISLERSSS 119 (1080)
T ss_pred ccceEEEEecCCceeccccceeEEEeccchhhheecccCCC
Confidence 34569999999999999999999999999 9999986543
No 9
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]
Probab=42.97 E-value=17 Score=35.26 Aligned_cols=31 Identities=26% Similarity=0.293 Sum_probs=22.6
Q ss_pred eeecCCCCcccccccCCCCCceeeeEeEEEEEEeCC
Q 024475 221 RRCTRRNGTRMWRRGADSDGYVANFVETEQVVQMNG 256 (267)
Q Consensus 221 RRS~~raGtRy~~RGiD~~G~vANfVETEqIv~~~~ 256 (267)
==.+.|||+ =+.++.|+.||||+-.--.-.+
T Consensus 331 PfA~LRPg~-----~L~~~~hIGNFVEvK~a~ig~g 361 (460)
T COG1207 331 PFARLRPGA-----VLGADVHIGNFVEVKKATIGKG 361 (460)
T ss_pred CccccCCcC-----cccCCCeEeeeEEEecccccCC
Confidence 334668887 3678899999999977555443
No 10
>PHA02762 hypothetical protein; Provisional
Probab=36.25 E-value=51 Score=22.48 Aligned_cols=34 Identities=15% Similarity=0.294 Sum_probs=25.3
Q ss_pred eCceEEEEEEEeeecCC--CCcccccccCCCCCcee
Q 024475 210 GRDIIDVTLIARRCTRR--NGTRMWRRGADSDGYVA 243 (267)
Q Consensus 210 ~~~~~~~~LISRRS~~r--aGtRy~~RGiD~~G~vA 243 (267)
.++--.+.++-.||... -|--|..=|||++|+.|
T Consensus 6 dn~fgnlii~~~rs~~ks~eg~afvtigide~g~ia 41 (62)
T PHA02762 6 DNDFGNLIIEFKRNVEKSFEGEAFVTIGIDENDKIS 41 (62)
T ss_pred cCCCccEEEEEecCccccccccEEEEEeECCCCcEE
Confidence 34444556666777654 58899999999999987
No 11
>PF12135 Sialidase_penC: Sialidase enzyme penultimate C terminal domain; InterPro: IPR021984 This domain is found in bacteria and eukaryotes, and is about 30 amino acids in length. The protein from which this domain is found is a sialidase enzyme which is used by virulent bacteria as a toxin. It is the penultimate C-terminal domain. ; PDB: 2VO8_A.
Probab=27.56 E-value=94 Score=17.76 Aligned_cols=21 Identities=19% Similarity=0.083 Sum_probs=14.3
Q ss_pred eeE-eEEEEEEeCCeEEEEEEe
Q 024475 244 NFV-ETEQVVQMNGFMASFVQV 264 (267)
Q Consensus 244 NfV-ETEqIv~~~~~~~SfvQi 264 (267)
|.+ .+||++..+..+++..+|
T Consensus 4 ~Eiy~~e~~~~~n~EIy~lnei 25 (25)
T PF12135_consen 4 NEIYIPEQEGSQNEEIYPLNEI 25 (25)
T ss_dssp --EEEEEEEEE--TTTEEEEEE
T ss_pred ceeechhheeeccccccccccC
Confidence 445 789999999888888775
No 12
>PF14692 DUF4462: Domain of unknown function (DUF4462)
Probab=26.42 E-value=26 Score=20.65 Aligned_cols=14 Identities=36% Similarity=0.563 Sum_probs=9.5
Q ss_pred CCCceeeehhhhHH
Q 024475 171 AEPRFLWNNYLMEA 184 (267)
Q Consensus 171 ~d~rF~WN~~l~~~ 184 (267)
+..||.||+-.-..
T Consensus 2 aksr~~WN~LpRag 15 (28)
T PF14692_consen 2 AKSRFNWNWLPRAG 15 (28)
T ss_pred cccccccccCcccc
Confidence 46799999654433
No 13
>PF10538 ITAM_Cys-rich: Immunoreceptor tyrosine-based activation motif; InterPro: IPR012316 Signal transduction by T and B cell antigen receptors and certain receptors for Ig Fc regions involves a conserved sequence motif, termed an immunoreceptor tyrosine-based activation motif (ITAM). It is also found in the cytoplasmic domain of the apoptosis receptor. Phosphorylation of the two ITAM tyrosines is a critical event in signal transduction. All (p)2ITAMs, but not their nonphosphorylated counterparts, induced extensive protein tyrosine phosphorylation in permeabilised cells. After binding of the ligand via an SH2 domain, phosphorylation of the two conserved tyrosines of ITAM creates binding sites for downstream signalling molecules and thus enables the initiation of signalling events. This phosphorylation was found to reflect activation of the src family kinases Lyn and Syk. Different ITAMs may preferentially activate distinct signalling pathways as a consequence of distinct SH2 effector binding preference [, ]. Furthermore, in viruses, ITAMs may play key roles in viral pathogenesis by regulating viral clearance, immune cell activation, immune cell recruitment through binding of cellular kinases and thereby down regulate their function []. This motif can be found in one to three copies and in association with the Ig-like domain. Proteins currently known to contain an ITAM motif are: Mammalian alpha and beta immunoglobulin proteins, TCR gamma receptors, FCR gamma receptors subunits, CD3 chains receptors and NFAT activation molecule. Hantavirus cytoplasmic elements. ; GO: 0007165 signal transduction
Probab=20.24 E-value=1.2e+02 Score=17.17 Aligned_cols=19 Identities=11% Similarity=0.342 Sum_probs=15.8
Q ss_pred ccccceEEEEEECCEEEEE
Q 024475 9 QKLYTRMRLWEFPDQFVVE 27 (267)
Q Consensus 9 ~~~~~~~~l~~t~~~~~i~ 27 (267)
.++|+.+.++...++-+|-
T Consensus 2 ~g~Yr~L~~FrYksrCyi~ 20 (24)
T PF10538_consen 2 SGCYRTLSLFRYKSRCYIF 20 (24)
T ss_pred CchheeeeeeEEeeeEEEE
Confidence 5789999999998887763
Done!