Query 024478
Match_columns 267
No_of_seqs 207 out of 1310
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 08:54:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024478.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024478hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2haq_A Cyclophilin; rotamase, 100.0 2.9E-54 9.9E-59 369.1 20.1 166 97-263 7-172 (172)
2 1a58_A Cyclophilin; isomerase, 100.0 1.8E-53 6.3E-58 365.7 22.5 164 99-263 4-176 (177)
3 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.7E-53 6E-58 364.3 22.1 166 98-264 7-172 (172)
4 3ich_A Peptidyl-prolyl CIS-tra 100.0 8.5E-54 2.9E-58 371.0 20.3 170 96-265 10-179 (188)
5 2wfi_A Peptidyl-prolyl CIS-tra 100.0 2E-53 6.7E-58 366.1 22.2 163 100-263 8-179 (179)
6 4fru_A Cyclophilin B, peptidyl 100.0 1.2E-53 4.1E-58 369.1 20.6 170 97-266 8-177 (185)
7 3pmp_A Cyclophilin A; peptidyl 100.0 2.3E-53 7.9E-58 360.9 21.9 163 101-264 2-164 (164)
8 2z6w_A Peptidyl-prolyl CIS-tra 100.0 2.5E-53 8.6E-58 361.1 22.0 164 100-264 2-165 (165)
9 2he9_A NK-tumor recognition pr 100.0 3E-53 1E-57 368.6 22.1 169 96-265 14-191 (192)
10 2r99_A Peptidyl-prolyl CIS-tra 100.0 5.6E-53 1.9E-57 361.5 22.3 166 98-264 8-173 (173)
11 2igv_A Peptidyl-prolyl CIS-tra 100.0 4.9E-53 1.7E-57 361.8 21.2 164 100-264 2-172 (173)
12 1qng_A Peptidyl-prolyl CIS-tra 100.0 6.2E-53 2.1E-57 360.2 20.1 162 100-263 2-170 (170)
13 3rdd_A Peptidyl-prolyl CIS-tra 100.0 8.6E-53 2.9E-57 363.5 21.0 172 92-264 13-184 (184)
14 2poy_A Peptidyl-prolyl CIS-tra 100.0 2.1E-52 7.2E-57 361.6 20.4 165 97-262 15-186 (186)
15 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.9E-52 6.6E-57 359.3 19.9 165 99-263 8-177 (177)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 6.5E-52 2.2E-56 360.5 22.0 168 98-266 24-193 (193)
17 2c3b_A Ppiase, cyclophilin; is 100.0 3.7E-52 1.3E-56 356.1 14.7 163 100-263 2-172 (172)
18 1z81_A Cyclophilin; structural 100.0 1.2E-50 4E-55 360.5 19.4 165 99-263 57-229 (229)
19 2ose_A Probable peptidyl-proly 100.0 1.1E-49 3.8E-54 355.6 17.9 166 98-265 11-208 (234)
20 1ihg_A Cyclophilin 40; ppiase 100.0 1E-47 3.6E-52 359.7 21.3 164 101-265 15-186 (370)
21 2x7k_A Peptidyl-prolyl CIS-tra 100.0 1.2E-47 4E-52 326.5 17.3 155 100-263 10-165 (166)
22 2fu0_A Cyclophilin, putative; 100.0 1.6E-47 5.6E-52 323.8 17.8 153 102-263 6-159 (160)
23 2poe_A Cyclophilin-like protei 100.0 9.2E-48 3.2E-52 332.3 16.5 154 106-264 17-175 (185)
24 2ok3_A Peptidyl-prolyl CIS-tra 100.0 2.3E-47 7.7E-52 323.2 16.9 148 113-264 7-156 (161)
25 1zkc_A Peptidyl-prolyl CIS-tra 100.0 8.4E-47 2.9E-51 329.1 19.5 157 100-265 18-176 (197)
26 2b71_A Cyclophilin-like protei 100.0 6.3E-47 2.2E-51 329.7 18.2 156 100-264 37-193 (196)
27 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.4E-46 4.8E-51 326.4 18.9 155 99-263 21-191 (191)
28 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.1E-46 3.8E-51 329.6 16.5 157 100-265 10-167 (203)
29 2a2n_A Peptidylprolyl isomeras 100.0 8.5E-47 2.9E-51 324.0 15.0 147 112-262 27-175 (176)
30 3bo7_A Peptidyl-prolyl CIS-tra 100.0 2.8E-46 9.6E-51 326.9 18.2 149 113-265 13-174 (201)
31 2hq6_A Serologically defined c 100.0 1.3E-45 4.4E-50 318.9 17.2 160 95-264 18-180 (185)
32 1v9t_A Cyclophilin B; beta bar 100.0 3.3E-45 1.1E-49 311.2 15.7 154 100-264 3-166 (166)
33 1lop_A Cyclophilin A; rotamase 100.0 5.5E-45 1.9E-49 309.3 13.4 145 113-264 6-164 (164)
34 3bkp_A Cyclophilin; malaria, i 100.0 1.9E-44 6.5E-49 321.4 16.2 160 95-264 15-193 (232)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 3.5E-44 1.2E-48 305.1 14.9 151 102-263 4-167 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 3.5E-37 1.2E-41 289.8 7.6 141 98-243 165-345 (369)
37 3kop_A Uncharacterized protein 94.5 0.18 6.3E-06 42.7 8.8 116 104-241 22-166 (188)
38 2nnz_A Hypothetical protein; b 92.8 0.23 7.8E-06 40.9 6.5 105 107-241 33-143 (153)
39 1zx8_A Hypothetical protein TM 65.6 18 0.00061 29.0 6.8 94 116-241 22-124 (136)
No 1
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=2.9e-54 Score=369.10 Aligned_cols=166 Identities=63% Similarity=1.086 Sum_probs=161.4
Q ss_pred cccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccc
Q 024478 97 QAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISI 176 (267)
Q Consensus 97 ~~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~ 176 (267)
++.++++|||||.+++|++|+|+||||++.||+||+||++||+|++|++|+|+.||||+|+|||||||++.++|+|+.++
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 86 (172)
T 2haq_A 7 EPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSI 86 (172)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCS
T ss_pred CCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccc
Confidence 57889999999999999999999999999999999999999999899999999999999999999999888899999999
Q ss_pred cCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeE
Q 024478 177 YGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCR 256 (267)
Q Consensus 177 ~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~ 256 (267)
||+.|++|++.++|. +|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|++.+++.+++|.++|+
T Consensus 87 ~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~ 165 (172)
T 2haq_A 87 YGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPVK 165 (172)
T ss_dssp SSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEE
T ss_pred cCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCeE
Confidence 999999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeEEe
Q 024478 257 IINSGEL 263 (267)
Q Consensus 257 I~~cGvL 263 (267)
|.+||+|
T Consensus 166 I~~~g~l 172 (172)
T 2haq_A 166 IVASGEL 172 (172)
T ss_dssp EEEEEEC
T ss_pred EEEeEEC
Confidence 9999986
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.8e-53 Score=365.66 Aligned_cols=164 Identities=59% Similarity=0.990 Sum_probs=157.8
Q ss_pred cccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCC---------cccCCCEEEEEEcCcEEEeCCCCCCC
Q 024478 99 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKG---------YGYKGCSFHRIIKDFMIQGGDFTEGD 169 (267)
Q Consensus 99 ~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g---------~~Y~g~~f~Rii~~f~iQgGd~~~~~ 169 (267)
..+++|||||+++++++|+|+||||++.||+||+||++||+++++ + |+|+.||||+|+|||||||++.++
T Consensus 4 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~ 82 (177)
T 1a58_A 4 KDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLH-YKGSTFHRVIKNFMIQGGDFTKGD 82 (177)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCC-CTTCBEEEEETTTEEEECCCSSSS
T ss_pred CCCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcce-eCCCEEEEEECCCEEEeCCccCCC
Confidence 357899999999999999999999999999999999999987543 5 999999999999999999998889
Q ss_pred CCCCccccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCC
Q 024478 170 GTGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTD 249 (267)
Q Consensus 170 g~gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~ 249 (267)
|+|+.++||..|+||++.++|+++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|++.+++.++
T Consensus 83 g~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~ 162 (177)
T 1a58_A 83 GTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKN 162 (177)
T ss_dssp SSCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS
T ss_pred CCCCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEeeEEe
Q 024478 250 YPKVPCRIINSGEL 263 (267)
Q Consensus 250 ~P~~~V~I~~cGvL 263 (267)
+|.++|+|.+||+|
T Consensus 163 ~P~~~v~I~~~G~l 176 (177)
T 1a58_A 163 RPLADVVILNCGEL 176 (177)
T ss_dssp CBSSCEEEEEEEEE
T ss_pred cCCCCeEEEEeEEE
Confidence 99999999999998
No 3
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.7e-53 Score=364.31 Aligned_cols=166 Identities=63% Similarity=1.102 Sum_probs=158.1
Q ss_pred ccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCcccc
Q 024478 98 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIY 177 (267)
Q Consensus 98 ~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~ 177 (267)
+..+++|||||++++|+.|+|+||||++.||+||+||++||++++|++|+|+.||||+|+|||||||++.++|+|+.++|
T Consensus 7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~ 86 (172)
T 2cmt_A 7 KRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIY 86 (172)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred CCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccC
Confidence 46789999999999999999999999999999999999999987888899999999999999999999888999999999
Q ss_pred CCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEE
Q 024478 178 GSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRI 257 (267)
Q Consensus 178 g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I 257 (267)
|+.|++|++.++|.++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++.++ .+++|.++|+|
T Consensus 87 g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I 165 (172)
T 2cmt_A 87 GRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGS-KSGKVKEPVII 165 (172)
T ss_dssp BSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCC-TTCCCSSCEEE
T ss_pred CCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 46899999999
Q ss_pred EeeEEec
Q 024478 258 INSGELP 264 (267)
Q Consensus 258 ~~cGvL~ 264 (267)
.+||+|.
T Consensus 166 ~~~g~l~ 172 (172)
T 2cmt_A 166 SRCGELI 172 (172)
T ss_dssp EEEEEEC
T ss_pred EEeEeEC
Confidence 9999984
No 4
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=8.5e-54 Score=370.96 Aligned_cols=170 Identities=62% Similarity=1.065 Sum_probs=163.8
Q ss_pred ccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCcc
Q 024478 96 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGIS 175 (267)
Q Consensus 96 ~~~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s 175 (267)
..+.++++|||||.+++|++|+|+||||++.||+||+||++||+|++|++|+|+.||||+|+|||||||+..++|+|+.+
T Consensus 10 ~~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~s 89 (188)
T 3ich_A 10 KGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKS 89 (188)
T ss_dssp CSCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCB
T ss_pred CCCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCcc
Confidence 34778999999999999999999999999999999999999999888988999999999999999999988899999999
Q ss_pred ccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCe
Q 024478 176 IYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPC 255 (267)
Q Consensus 176 ~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V 255 (267)
+||+.|++|++.++|+++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|++.+++.+++|.++|
T Consensus 90 i~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v 169 (188)
T 3ich_A 90 IYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDV 169 (188)
T ss_dssp TTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCE
T ss_pred ccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeEEecC
Q 024478 256 RIINSGELPL 265 (267)
Q Consensus 256 ~I~~cGvL~~ 265 (267)
+|.+||+|..
T Consensus 170 ~I~~~~~l~~ 179 (188)
T 3ich_A 170 IIADCGKIEV 179 (188)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEeEEEec
Confidence 9999999853
No 5
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=2e-53 Score=366.08 Aligned_cols=163 Identities=60% Similarity=1.014 Sum_probs=157.5
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCC---------cccCCCEEEEEEcCcEEEeCCCCCCCC
Q 024478 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKG---------YGYKGCSFHRIIKDFMIQGGDFTEGDG 170 (267)
Q Consensus 100 ~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g---------~~Y~g~~f~Rii~~f~iQgGd~~~~~g 170 (267)
.+++|||||++++|+.|+|+||||++.||+||+||++||+|+++ + |+|+.||||+|+|||||||++.++|
T Consensus 8 ~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~-Y~g~~FhRvi~~f~iQgGd~~~~~g 86 (179)
T 2wfi_A 8 QRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLH-YKSCLFHRVVKDFMVQGGDFSEGNG 86 (179)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCe-ECCCEEEEEECCCEEEcccccCCCC
Confidence 57899999999999999999999999999999999999987654 5 9999999999999999999988899
Q ss_pred CCCccccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCC
Q 024478 171 TGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDY 250 (267)
Q Consensus 171 ~gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~ 250 (267)
+|+.++||..|+||++.++|+++|+|||||.+|++++|||||++.++||||++|+|||+|++|||||++|++.+++.+++
T Consensus 87 ~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~ 166 (179)
T 2wfi_A 87 RGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASK 166 (179)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSC
T ss_pred CCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEeeEEe
Q 024478 251 PKVPCRIINSGEL 263 (267)
Q Consensus 251 P~~~V~I~~cGvL 263 (267)
|.++|+|.+||+|
T Consensus 167 P~~~v~I~~~G~l 179 (179)
T 2wfi_A 167 PFAEVRILSCGEL 179 (179)
T ss_dssp BSSCEEEEEEEEC
T ss_pred CCCCeEEEeCeeC
Confidence 9999999999986
No 6
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.2e-53 Score=369.09 Aligned_cols=170 Identities=62% Similarity=1.076 Sum_probs=163.8
Q ss_pred cccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccc
Q 024478 97 QAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISI 176 (267)
Q Consensus 97 ~~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~ 176 (267)
.+.++++|||||+++++++|+|+||||++.||+||+||++||++++|++|+|+.||||+|+|||||||++.+++.|+.++
T Consensus 8 ~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 87 (185)
T 4fru_A 8 GPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSI 87 (185)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBT
T ss_pred CCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccc
Confidence 47899999999999999999999999999999999999999998778559999999999999999999998999999999
Q ss_pred cCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeE
Q 024478 177 YGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCR 256 (267)
Q Consensus 177 ~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~ 256 (267)
|++.|++|++.++|+++|+|+|||.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++.+++|.++|+
T Consensus 88 ~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~ 167 (185)
T 4fru_A 88 YGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVT 167 (185)
T ss_dssp TBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEE
T ss_pred cCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeEEecCC
Q 024478 257 IINSGELPLD 266 (267)
Q Consensus 257 I~~cGvL~~~ 266 (267)
|.+||+|+++
T Consensus 168 I~~~g~l~~~ 177 (185)
T 4fru_A 168 IADCGKIEVE 177 (185)
T ss_dssp EEEEEEEEEE
T ss_pred EEEceEEecC
Confidence 9999999653
No 7
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=2.3e-53 Score=360.86 Aligned_cols=163 Identities=56% Similarity=1.014 Sum_probs=157.6
Q ss_pred cceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCCC
Q 024478 101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSS 180 (267)
Q Consensus 101 ~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~~ 180 (267)
+++|||||.+++|+.|+|+||||++.||+||+||++||+|++|++|+|+.||||+|+|||||||++.+++.|+.++|++.
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 81 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEK 81 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcc
Confidence 68999999999999999999999999999999999999988999999999999999999999998889999999999999
Q ss_pred CCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEee
Q 024478 181 FEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINS 260 (267)
Q Consensus 181 ~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I~~c 260 (267)
|++|++.++|.++|+|+|||.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++ +++|.++|+|.+|
T Consensus 82 ~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~P~~~v~I~~c 160 (164)
T 3pmp_A 82 FADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGKTNATIKITDC 160 (164)
T ss_dssp BCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEEEE
T ss_pred ccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCCcccCEEEEeC
Confidence 999999999999999999999999999999999999999999999999999999999999999886 7899999999999
Q ss_pred EEec
Q 024478 261 GELP 264 (267)
Q Consensus 261 GvL~ 264 (267)
|+|.
T Consensus 161 g~l~ 164 (164)
T 3pmp_A 161 GTVA 164 (164)
T ss_dssp EEC-
T ss_pred eEEC
Confidence 9984
No 8
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=2.5e-53 Score=361.08 Aligned_cols=164 Identities=66% Similarity=1.130 Sum_probs=157.8
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCC
Q 024478 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 179 (267)
Q Consensus 100 ~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~ 179 (267)
.+++|||||++++|++|+|+||||++.||+||+||++||+|++||+|+|+.||||+|+|||||||++.++|+|+.++||+
T Consensus 2 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~ 81 (165)
T 2z6w_A 2 GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGS 81 (165)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBS
T ss_pred CCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCC
Confidence 36899999999999999999999999999999999999998899999999999999999999999988899999999999
Q ss_pred CCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEe
Q 024478 180 SFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIIN 259 (267)
Q Consensus 180 ~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I~~ 259 (267)
.|++|++.++|.++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|++.++ .+++|.++|+|.+
T Consensus 82 ~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I~~ 160 (165)
T 2z6w_A 82 RFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS-KSGRTSKKIVITD 160 (165)
T ss_dssp CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEEE
T ss_pred cccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCcEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999975 6899999999999
Q ss_pred eEEec
Q 024478 260 SGELP 264 (267)
Q Consensus 260 cGvL~ 264 (267)
||+|.
T Consensus 161 ~g~l~ 165 (165)
T 2z6w_A 161 CGQLS 165 (165)
T ss_dssp EEECC
T ss_pred eEEEC
Confidence 99984
No 9
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-53 Score=368.58 Aligned_cols=169 Identities=51% Similarity=0.929 Sum_probs=158.0
Q ss_pred ccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCC---------cccCCCEEEEEEcCcEEEeCCCC
Q 024478 96 LQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKG---------YGYKGCSFHRIIKDFMIQGGDFT 166 (267)
Q Consensus 96 ~~~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g---------~~Y~g~~f~Rii~~f~iQgGd~~ 166 (267)
+....+++|||||++++|++|+|+||||++.||+||+||++||+|+++ + |+|+.||||+|+|||||||++
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~-Y~g~~FhRVi~~fmiQgGd~~ 92 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLC-YKGSTFHRVVKNFMIQGGDFS 92 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTTEEEECCTT
T ss_pred ccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCe-ECCCEEEEEECCCEEEcCccc
Confidence 445689999999999999999999999999999999999999987654 5 999999999999999999998
Q ss_pred CCCCCCCccccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCC
Q 024478 167 EGDGTGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETS 246 (267)
Q Consensus 167 ~~~g~gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~ 246 (267)
.++|+|+.++||..|+||++.++|+++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|++.+++
T Consensus 93 ~~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~ 172 (192)
T 2he9_A 93 EGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTD 172 (192)
T ss_dssp TSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC
T ss_pred CCCCCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCeEEEeeEEecC
Q 024478 247 RTDYPKVPCRIINSGELPL 265 (267)
Q Consensus 247 ~~~~P~~~V~I~~cGvL~~ 265 (267)
++++|.++|+|.+||+|..
T Consensus 173 ~~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 173 AASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp TTSCBSSCEEEEEEEECC-
T ss_pred CCCCCcCCeEEEEeEEEcc
Confidence 9999999999999999864
No 10
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=5.6e-53 Score=361.48 Aligned_cols=166 Identities=60% Similarity=1.041 Sum_probs=158.0
Q ss_pred ccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCcccc
Q 024478 98 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIY 177 (267)
Q Consensus 98 ~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~ 177 (267)
...+++|||||.+++|+.|+|+||||++.||+||+||++||+|++|++|+|+.||||+|+|||||||++.++|+|+.++|
T Consensus 8 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 87 (173)
T 2r99_A 8 ARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIY 87 (173)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred ccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccC
Confidence 34678999999999999999999999999999999999999988898899999999999999999999988999999999
Q ss_pred CCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEE
Q 024478 178 GSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRI 257 (267)
Q Consensus 178 g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I 257 (267)
|..|++|++.++|+++|+|+|||.+||+++|||||++.+++|||++|+|||+|++|||||++|++.+++ +++|.++|+|
T Consensus 88 g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~~~P~~~v~I 166 (173)
T 2r99_A 88 GKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSK-DGKPKQKVII 166 (173)
T ss_dssp BSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEE
T ss_pred CCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCC-CCCCCCCeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999875 5899999999
Q ss_pred EeeEEec
Q 024478 258 INSGELP 264 (267)
Q Consensus 258 ~~cGvL~ 264 (267)
.+||+|.
T Consensus 167 ~~cG~l~ 173 (173)
T 2r99_A 167 ADCGEYV 173 (173)
T ss_dssp EEEEECC
T ss_pred EEeeeEC
Confidence 9999984
No 11
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=4.9e-53 Score=361.81 Aligned_cols=164 Identities=66% Similarity=1.149 Sum_probs=156.6
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCc-------ccCCCEEEEEEcCcEEEeCCCCCCCCCC
Q 024478 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY-------GYKGCSFHRIIKDFMIQGGDFTEGDGTG 172 (267)
Q Consensus 100 ~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~-------~Y~g~~f~Rii~~f~iQgGd~~~~~g~g 172 (267)
.+++||||+++++++.|+|+||||++.||+||+||++||++++|+ +|+|+.||||+|+|||||||++.++|+|
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 81 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTG 81 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCC
Confidence 468999999999999999999999999999999999999987773 2999999999999999999998889999
Q ss_pred CccccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCC
Q 024478 173 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPK 252 (267)
Q Consensus 173 g~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~ 252 (267)
+.++||+.|+||++.++|.++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|+++++ .+++|.
T Consensus 82 g~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~ 160 (173)
T 2igv_A 82 GESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGS-QSGKPV 160 (173)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCCS
T ss_pred CCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988 568999
Q ss_pred CCeEEEeeEEec
Q 024478 253 VPCRIINSGELP 264 (267)
Q Consensus 253 ~~V~I~~cGvL~ 264 (267)
++|+|.+||+|+
T Consensus 161 ~~v~I~~~g~l~ 172 (173)
T 2igv_A 161 KDCMIADCGQLK 172 (173)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCEEEEEeEEEc
Confidence 999999999996
No 12
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=6.2e-53 Score=360.24 Aligned_cols=162 Identities=60% Similarity=1.037 Sum_probs=155.5
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcc-------cCCCEEEEEEcCcEEEeCCCCCCCCCC
Q 024478 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQGGDFTEGDGTG 172 (267)
Q Consensus 100 ~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~-------Y~g~~f~Rii~~f~iQgGd~~~~~g~g 172 (267)
.+++|||||++++++.|+|+||||++.||+||+||++||+++ +++ |+|+.||||+|+|||||||++.++|+|
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 80 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG 80 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence 578999999999999999999999999999999999999854 564 999999999999999999998889999
Q ss_pred CccccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCC
Q 024478 173 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPK 252 (267)
Q Consensus 173 g~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~ 252 (267)
+.++||+.|+||++.++|+++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|+++++ .+++|.
T Consensus 81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~ 159 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYVK 159 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCCS
T ss_pred CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 789999
Q ss_pred CCeEEEeeEEe
Q 024478 253 VPCRIINSGEL 263 (267)
Q Consensus 253 ~~V~I~~cGvL 263 (267)
++|+|.+||+|
T Consensus 160 ~~v~I~~cG~l 170 (170)
T 1qng_A 160 RSVVITDCGEL 170 (170)
T ss_dssp SCEEEEEEEEC
T ss_pred CCeEEEeceeC
Confidence 99999999986
No 13
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=8.6e-53 Score=363.55 Aligned_cols=172 Identities=60% Similarity=1.057 Sum_probs=159.2
Q ss_pred ccccccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCC
Q 024478 92 KDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGT 171 (267)
Q Consensus 92 ~~~~~~~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~ 171 (267)
.....++..+++||||+++++++.|+|+||||++.||+||+||++||++++|++|+|+.||||+|+|||||||++.+++.
T Consensus 13 ~~~~~~~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 92 (184)
T 3rdd_A 13 ENLYFQGMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGT 92 (184)
T ss_dssp --------CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCCcccCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCC
Confidence 33445677899999999999999999999999999999999999999988898999999999999999999999889999
Q ss_pred CCccccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCC
Q 024478 172 GGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYP 251 (267)
Q Consensus 172 gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P 251 (267)
|+.++|+..|++|++.++|+++|+|+||+.+|++++|||||++.++++||++|+|||+|++|||||++|+++++ ++++|
T Consensus 93 gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~-~~g~P 171 (184)
T 3rdd_A 93 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGS-RNGKT 171 (184)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCC
T ss_pred CCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976 57899
Q ss_pred CCCeEEEeeEEec
Q 024478 252 KVPCRIINSGELP 264 (267)
Q Consensus 252 ~~~V~I~~cGvL~ 264 (267)
.++|+|.+||+|+
T Consensus 172 ~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 172 SKKITIADCGQLE 184 (184)
T ss_dssp SSCEEEEEEEECC
T ss_pred cCCeEEEeCeEEC
Confidence 9999999999985
No 14
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=2.1e-52 Score=361.62 Aligned_cols=165 Identities=62% Similarity=1.036 Sum_probs=155.8
Q ss_pred cccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcc-------cCCCEEEEEEcCcEEEeCCCCCCC
Q 024478 97 QAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQGGDFTEGD 169 (267)
Q Consensus 97 ~~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~-------Y~g~~f~Rii~~f~iQgGd~~~~~ 169 (267)
....+++||||+.+++++.|+|+||||++.||+||+||++||+|++|++ |+|+.||||+|+|||||||++.++
T Consensus 15 ~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~ 94 (186)
T 2poy_A 15 YFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGD 94 (186)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSS
T ss_pred ccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCC
Confidence 3557899999999999999999999999999999999999999888885 999999999999999999998889
Q ss_pred CCCCccccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCC
Q 024478 170 GTGGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTD 249 (267)
Q Consensus 170 g~gg~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~ 249 (267)
|+|+.++||+.|+||++.++|.++|+|||||.+||+++|||||++.+++|||++|+|||+|++|||||++|+++++ .++
T Consensus 95 G~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t-~~~ 173 (186)
T 2poy_A 95 GTGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS-QNG 173 (186)
T ss_dssp SSCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTS
T ss_pred CCCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988 678
Q ss_pred CCCCCeEEEeeEE
Q 024478 250 YPKVPCRIINSGE 262 (267)
Q Consensus 250 ~P~~~V~I~~cGv 262 (267)
+|.++|+|.+||+
T Consensus 174 ~P~~~v~I~~cG~ 186 (186)
T 2poy_A 174 KPTKSVCITASGV 186 (186)
T ss_dssp CCSSCEEEEEEEC
T ss_pred CCCCCEEEEeCCC
Confidence 9999999999996
No 15
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.9e-52 Score=359.34 Aligned_cols=165 Identities=61% Similarity=1.055 Sum_probs=157.5
Q ss_pred cccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCc-----ccCCCEEEEEEcCcEEEeCCCCCCCCCCC
Q 024478 99 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY-----GYKGCSFHRIIKDFMIQGGDFTEGDGTGG 173 (267)
Q Consensus 99 ~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~-----~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg 173 (267)
..+++||||+.+++|+.|+|+||||++.||+||+||++||+++.+. +|+|+.||||+|+|||||||++.++|+|+
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg 87 (177)
T 1mzw_A 8 PVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGV 87 (177)
T ss_dssp CCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCC
T ss_pred CCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCC
Confidence 3578999999999999999999999999999999999999865532 39999999999999999999988899999
Q ss_pred ccccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCC
Q 024478 174 ISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKV 253 (267)
Q Consensus 174 ~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~ 253 (267)
.++||+.|++|++.++|+++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++++++|.+
T Consensus 88 ~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~ 167 (177)
T 1mzw_A 88 ASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKL 167 (177)
T ss_dssp CCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSS
T ss_pred CccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeEEe
Q 024478 254 PCRIINSGEL 263 (267)
Q Consensus 254 ~V~I~~cGvL 263 (267)
+|+|.+||+|
T Consensus 168 ~v~I~~cG~l 177 (177)
T 1mzw_A 168 PVVISQCGEM 177 (177)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEeceeC
Confidence 9999999997
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=6.5e-52 Score=360.47 Aligned_cols=168 Identities=54% Similarity=0.891 Sum_probs=159.1
Q ss_pred ccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCcccc
Q 024478 98 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIY 177 (267)
Q Consensus 98 ~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~ 177 (267)
...+++|||||++++|++|+|+||||++.||+||+||++||+++++++|+|+.||||+|+|||||||++.+++.|+.++|
T Consensus 24 ~~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 103 (193)
T 3k2c_A 24 KEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIY 103 (193)
T ss_dssp --CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTT
T ss_pred ccCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccC
Confidence 35678999999999999999999999999999999999999988888899999999999999999998889999999999
Q ss_pred CCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCC--CCe
Q 024478 178 GSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPK--VPC 255 (267)
Q Consensus 178 g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~--~~V 255 (267)
+..|++|++.++|+++|+|+|||.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++ +++|. ++|
T Consensus 104 g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~g~P~~~~~v 182 (193)
T 3k2c_A 104 GEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE-SGQVKKGYRI 182 (193)
T ss_dssp SSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCCTTCCE
T ss_pred CCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC-CCcCccCccE
Confidence 999999999999999999999999999999999999999999999999999999999999999999887 67999 999
Q ss_pred EEEeeEEecCC
Q 024478 256 RIINSGELPLD 266 (267)
Q Consensus 256 ~I~~cGvL~~~ 266 (267)
+|.+||+|..+
T Consensus 183 ~I~~cG~l~~~ 193 (193)
T 3k2c_A 183 EIRDCGVLGSN 193 (193)
T ss_dssp EEEEEEECC--
T ss_pred EEEEceEeCCC
Confidence 99999999753
No 17
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=3.7e-52 Score=356.10 Aligned_cols=163 Identities=57% Similarity=0.979 Sum_probs=125.9
Q ss_pred ccceEEEEEEEC--C---eeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCc
Q 024478 100 VTTKVFFDVDIG--G---KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI 174 (267)
Q Consensus 100 ~~~~v~fdi~i~--~---t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~ 174 (267)
++ +|||||+++ + |++|+|+||||++.||+||+||++||+|++|++|+|+.||||+|+|||||||++.++|+|+.
T Consensus 2 it-~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~ 80 (172)
T 2c3b_A 2 MS-QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGR 80 (172)
T ss_dssp CC-CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC----------
T ss_pred ce-EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCc
Confidence 46 999999998 5 55599999999999999999999999988888899999999999999999998778999999
Q ss_pred cccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEc--CHHHHHHhhcCCCCCCC-CC
Q 024478 175 SIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVID--GMDVVRKLESVETSRTD-YP 251 (267)
Q Consensus 175 s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~Vie--GmdVL~~I~~~~t~~~~-~P 251 (267)
++||+.|++|+..++|+++|+|||||.+|++++|||||++.+++|||++|+|||+|++ |||||++|++.+++..+ +|
T Consensus 81 si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P 160 (172)
T 2c3b_A 81 SIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRS 160 (172)
T ss_dssp ------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCS
T ss_pred ccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999 99999999999998765 99
Q ss_pred CCCeEEEeeEEe
Q 024478 252 KVPCRIINSGEL 263 (267)
Q Consensus 252 ~~~V~I~~cGvL 263 (267)
.++|+|.+||+|
T Consensus 161 ~~~v~I~~cG~l 172 (172)
T 2c3b_A 161 NTRPKIVNCGEL 172 (172)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEeCeeC
Confidence 999999999986
No 18
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-50 Score=360.48 Aligned_cols=165 Identities=50% Similarity=0.936 Sum_probs=157.4
Q ss_pred cccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCc-----ccCCCEEEEEEcCcEEEeCCCCCCCCCCC
Q 024478 99 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY-----GYKGCSFHRIIKDFMIQGGDFTEGDGTGG 173 (267)
Q Consensus 99 ~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~-----~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg 173 (267)
..+++||||+.+++++.|+|+||||++.||+||+||++||+++++. +|+|+.||||+|+|||||||++.++|+|+
T Consensus 57 ~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg 136 (229)
T 1z81_A 57 PSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGS 136 (229)
T ss_dssp TTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCC
T ss_pred CCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCC
Confidence 3578999999999999999999999999999999999999876542 39999999999999999999988999999
Q ss_pred ccccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEE--cCHHHHHHhhcCCCCCC-CC
Q 024478 174 ISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVI--DGMDVVRKLESVETSRT-DY 250 (267)
Q Consensus 174 ~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~Vi--eGmdVL~~I~~~~t~~~-~~ 250 (267)
.++||+.|+||++.++|+++|+|+|||.+|++++|||||++.+++|||++|+|||+|+ +|||||++|++++++.+ ++
T Consensus 137 ~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~ 216 (229)
T 1z81_A 137 LSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYK 216 (229)
T ss_dssp CBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCC
T ss_pred CccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999 99999999999999987 99
Q ss_pred CCCCeEEEeeEEe
Q 024478 251 PKVPCRIINSGEL 263 (267)
Q Consensus 251 P~~~V~I~~cGvL 263 (267)
|.++|+|.+||+|
T Consensus 217 P~~~V~I~~cG~l 229 (229)
T 1z81_A 217 PKIPINVVECGEL 229 (229)
T ss_dssp BSSCEEEEEEEEC
T ss_pred CCCCeEEEeCeeC
Confidence 9999999999997
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.1e-49 Score=355.59 Aligned_cols=166 Identities=27% Similarity=0.477 Sum_probs=151.3
Q ss_pred ccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccC-----------C----C--cccCCCEEEEEEcCcEE
Q 024478 98 AKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGE-----------K----G--YGYKGCSFHRIIKDFMI 160 (267)
Q Consensus 98 ~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~-----------~----g--~~Y~g~~f~Rii~~f~i 160 (267)
...+++|||||.+++|+.|+|+||||.+.||+||+||++||+|+ + | ++|+|+.||||+|+|||
T Consensus 11 ~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~Fmi 90 (234)
T 2ose_A 11 SGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYI 90 (234)
T ss_dssp CCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEE
T ss_pred CCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEE
Confidence 44688999999999999999999999999999999999999976 4 5 66999999999999999
Q ss_pred EeCCCCCCCCCCCccccCCC-----CCCCcccccCCCCeEEEEee----CCCCCCCceeEEEccC------CCCCCCCCe
Q 024478 161 QGGDFTEGDGTGGISIYGSS-----FEDESFVLKHVGPGVLSMAN----AGPNTNGSQFFICTVK------TPWLDNRHV 225 (267)
Q Consensus 161 QgGd~~~~~g~gg~s~~g~~-----~~de~~~l~h~~~G~lsma~----~gp~s~gSqFfItl~~------~p~LDg~~t 225 (267)
||||+..++|+|+.++||+. |+ ++.++|.++|+||||| .+|+++||||||++.+ .+|||++|+
T Consensus 91 QgGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~t 168 (234)
T 2ose_A 91 VSGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQV 168 (234)
T ss_dssp EECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSE
T ss_pred EcCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCee
Confidence 99998889999999999987 76 5688999999999999 8999999999999999 999999999
Q ss_pred EEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEeeEEecC
Q 024478 226 VFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPL 265 (267)
Q Consensus 226 VFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I~~cGvL~~ 265 (267)
|||+|++|||||++|++++++.+++|.++|+|.+|++|..
T Consensus 169 VFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~ 208 (234)
T 2ose_A 169 VIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLD 208 (234)
T ss_dssp EEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCC
T ss_pred EEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecC
Confidence 9999999999999999999999999999999999999853
No 20
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=1e-47 Score=359.70 Aligned_cols=164 Identities=66% Similarity=1.084 Sum_probs=157.0
Q ss_pred cceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCc--------ccCCCEEEEEEcCcEEEeCCCCCCCCCC
Q 024478 101 TTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGY--------GYKGCSFHRIIKDFMIQGGDFTEGDGTG 172 (267)
Q Consensus 101 ~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~--------~Y~g~~f~Rii~~f~iQgGd~~~~~g~g 172 (267)
+++||||+.+++++.|+|+||||++.||+||+||++||++++|+ +|+|+.||||+|+|||||||++.++|+|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 78999999999999999999999999999999999999986543 3999999999999999999999899999
Q ss_pred CccccCCCCCCCcccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCC
Q 024478 173 GISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPK 252 (267)
Q Consensus 173 g~s~~g~~~~de~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~ 252 (267)
|.++||..|++|++.++|+++|+|+||+.+|+++|||||||+.+++|||++|+|||+|++||+||++|++.+++. ++|.
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P~ 173 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKPA 173 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEES
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-Cccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998877 8999
Q ss_pred CCeEEEeeEEecC
Q 024478 253 VPCRIINSGELPL 265 (267)
Q Consensus 253 ~~V~I~~cGvL~~ 265 (267)
.+|+|.+||++..
T Consensus 174 ~~v~I~~~g~l~~ 186 (370)
T 1ihg_A 174 KLCVIAECGELKE 186 (370)
T ss_dssp SCEEEEEEEEECT
T ss_pred eeEEEEEEEEecc
Confidence 9999999999853
No 21
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=1.2e-47 Score=326.47 Aligned_cols=155 Identities=50% Similarity=0.859 Sum_probs=146.6
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCC
Q 024478 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 179 (267)
Q Consensus 100 ~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~ 179 (267)
.++.|.|+ |++|+|+||||++.||+||+||++||+ +|| |+|+.||||+|+|||||||+. +++.|+.++|+.
T Consensus 10 ~~~~v~l~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~ 80 (166)
T 2x7k_A 10 QPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELAR--RGY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGK 80 (166)
T ss_dssp CCSEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHH--HTT-TTTEECCEEETTTEEEECCTT-SSSSCCCCTTSS
T ss_pred CCCEEEEE-----eCCCcEEEEEccCCCCHHHHHHHHHHh--cCC-CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCC
Confidence 34678887 789999999999999999999999995 678 999999999999999999986 788999999999
Q ss_pred CCCCCc-ccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEE
Q 024478 180 SFEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRII 258 (267)
Q Consensus 180 ~~~de~-~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I~ 258 (267)
.|++|. ..++|.++|+|||||.+|++++|||||++.+++|||++|+|||+|++|||||++|++.+++.+++|.++|+|.
T Consensus 81 ~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~ 160 (166)
T 2x7k_A 81 QFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKII 160 (166)
T ss_dssp CBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEE
T ss_pred ccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEE
Confidence 999998 4789988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEe
Q 024478 259 NSGEL 263 (267)
Q Consensus 259 ~cGvL 263 (267)
+|.++
T Consensus 161 ~~~i~ 165 (166)
T 2x7k_A 161 KAYPS 165 (166)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99986
No 22
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.6e-47 Score=323.81 Aligned_cols=153 Identities=48% Similarity=0.799 Sum_probs=144.2
Q ss_pred ceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCCCC
Q 024478 102 TKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSF 181 (267)
Q Consensus 102 ~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~~~ 181 (267)
..|.|+ |+.|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|||||||+. ++|.|+.++||..|
T Consensus 6 ~~v~~~-----T~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~ 76 (160)
T 2fu0_A 6 KSAIIY-----TTMGDIHISLFYKECKKTVQNFSVHSI--NGY-YNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNEF 76 (160)
T ss_dssp CEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCB
T ss_pred CEEEEE-----ecCccEEEEEeCCCChHHHHHHHHHhc--cCc-cCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCCc
Confidence 445555 889999999999999999999999995 778 999999999999999999985 78899999999999
Q ss_pred CCCcc-cccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEee
Q 024478 182 EDESF-VLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINS 260 (267)
Q Consensus 182 ~de~~-~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I~~c 260 (267)
++|.. .++|.++|+|+||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++++++|.++|+|.+|
T Consensus 77 ~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~ 156 (160)
T 2fu0_A 77 EDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNI 156 (160)
T ss_dssp CCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEE
T ss_pred cccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEE
Confidence 99987 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEe
Q 024478 261 GEL 263 (267)
Q Consensus 261 GvL 263 (267)
.++
T Consensus 157 ~v~ 159 (160)
T 2fu0_A 157 KIN 159 (160)
T ss_dssp EEC
T ss_pred EEe
Confidence 886
No 23
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=9.2e-48 Score=332.33 Aligned_cols=154 Identities=44% Similarity=0.658 Sum_probs=145.1
Q ss_pred EEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCCCCCCCc
Q 024478 106 FDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDES 185 (267)
Q Consensus 106 fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~~~~de~ 185 (267)
+++.+. |++|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|||||||++ ++|.|+.++||..|++|.
T Consensus 17 ~~v~i~-t~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 91 (185)
T 2poe_A 17 QGVRII-TNYGDLKFELFCSQCPKACKNFLALSA--SGY-YKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDEI 91 (185)
T ss_dssp CEEEEE-ETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCCC
T ss_pred eEEEEE-ecCccEEEEEeCCCCcHHHHHHHHHhc--cCC-CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCcccccc
Confidence 344444 899999999999999999999999995 678 999999999999999999987 788999999999999998
Q ss_pred -ccccCCCCeEEEEeeCC----CCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEee
Q 024478 186 -FVLKHVGPGVLSMANAG----PNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINS 260 (267)
Q Consensus 186 -~~l~h~~~G~lsma~~g----p~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I~~c 260 (267)
..++|+++|+|||||.+ |++++|||||++.+++|||++|+|||+|++|||||++|++++++.+++|.++|+|.+|
T Consensus 92 ~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~ 171 (185)
T 2poe_A 92 YPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDI 171 (185)
T ss_dssp CTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEE
T ss_pred cCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEE
Confidence 78899999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EEec
Q 024478 261 GELP 264 (267)
Q Consensus 261 GvL~ 264 (267)
+++.
T Consensus 172 ~i~~ 175 (185)
T 2poe_A 172 VIHS 175 (185)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 24
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=2.3e-47 Score=323.19 Aligned_cols=148 Identities=49% Similarity=0.773 Sum_probs=141.7
Q ss_pred eeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCCCCCCCcc-cccCC
Q 024478 113 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLKHV 191 (267)
Q Consensus 113 t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~~~~de~~-~l~h~ 191 (267)
|+.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|||||||+. +++.|+.++||..|++|.. .++|+
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h~ 82 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCA--SNY-YNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEYSEYLKHN 82 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTTCCSC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhh--hcc-cCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCccccccCcCcCcC
Confidence 899999999999999999999999995 677 999999999999999999987 7889999999999999985 68899
Q ss_pred CCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCC-CCCCCCeEEEeeEEec
Q 024478 192 GPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRT-DYPKVPCRIINSGELP 264 (267)
Q Consensus 192 ~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~-~~P~~~V~I~~cGvL~ 264 (267)
++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++.+ ++|.++|+|.+|.++.
T Consensus 83 ~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~ 156 (161)
T 2ok3_A 83 VRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHA 156 (161)
T ss_dssp STTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEEC
T ss_pred CCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEec
Confidence 999999999999999999999999999999999999999999999999999999987 9999999999999985
No 25
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=8.4e-47 Score=329.05 Aligned_cols=157 Identities=46% Similarity=0.754 Sum_probs=146.5
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCC
Q 024478 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 179 (267)
Q Consensus 100 ~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~ 179 (267)
...+|.|+ |+.|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|||||||+. ++|.|+.++||.
T Consensus 18 ~~~~v~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~--~g~-Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~ 88 (197)
T 1zkc_A 18 GSGYVRLH-----TNKGDLNLELHCDLTPKTCENFIRLCK--KHY-YDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGK 88 (197)
T ss_dssp SCEEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHH--TTT-TTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBS
T ss_pred CCcEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHHh--cCC-CCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCC
Confidence 44455555 889999999999999999999999994 788 999999999999999999986 788999999999
Q ss_pred CCCCC-cccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCC-CCCCCCeEE
Q 024478 180 SFEDE-SFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRT-DYPKVPCRI 257 (267)
Q Consensus 180 ~~~de-~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~-~~P~~~V~I 257 (267)
.|++| +..++|+++|+|+|||.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++.+ ++|.++|+|
T Consensus 89 ~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I 168 (197)
T 1zkc_A 89 PFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRI 168 (197)
T ss_dssp CBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEE
T ss_pred ccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEE
Confidence 99999 4788999999999999999999999999999999999999999999999999999999999987 999999999
Q ss_pred EeeEEecC
Q 024478 258 INSGELPL 265 (267)
Q Consensus 258 ~~cGvL~~ 265 (267)
.+|+++..
T Consensus 169 ~~~~v~~d 176 (197)
T 1zkc_A 169 DATTVFVD 176 (197)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999853
No 26
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=6.3e-47 Score=329.68 Aligned_cols=156 Identities=42% Similarity=0.700 Sum_probs=146.2
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCC
Q 024478 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 179 (267)
Q Consensus 100 ~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~ 179 (267)
.+..|.|+ |+.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|||||||+. ++|.|+.++||.
T Consensus 37 ~~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~--~g~-Y~g~~FhRVi~~f~iQgGd~~-~~g~gg~si~g~ 107 (196)
T 2b71_A 37 ERGYITIY-----TNLGDFEVELYWYHSPKTCLNFYTLCE--MGF-YDNTIFHRVIPNFVIQGGDPT-GTGKGGKSIYGE 107 (196)
T ss_dssp HSCEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHH--TTT-TTTEEEEEEETTTEEEEEETT-SSSSCCCBTTBS
T ss_pred CCcEEEEE-----eCCCCEEEEEeCCCCcHHHHHHHHHhh--cCC-cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCC
Confidence 45678887 889999999999999999999999995 788 999999999999999999987 788999999999
Q ss_pred CCCCCc-ccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEE
Q 024478 180 SFEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRII 258 (267)
Q Consensus 180 ~~~de~-~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I~ 258 (267)
.|++|. ..++|+++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++.+++|.++|+|.
T Consensus 108 ~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~ 187 (196)
T 2b71_A 108 YFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKIL 187 (196)
T ss_dssp CBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEE
T ss_pred cccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEE
Confidence 999995 5789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEec
Q 024478 259 NSGELP 264 (267)
Q Consensus 259 ~cGvL~ 264 (267)
+|+++.
T Consensus 188 ~~~i~~ 193 (196)
T 2b71_A 188 RTSTAV 193 (196)
T ss_dssp EEEC--
T ss_pred EEEEec
Confidence 999985
No 27
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=1.4e-46 Score=326.37 Aligned_cols=155 Identities=46% Similarity=0.715 Sum_probs=142.2
Q ss_pred cccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCC-------------CcccCCCEEEEEEcCcEEEeCCC
Q 024478 99 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEK-------------GYGYKGCSFHRIIKDFMIQGGDF 165 (267)
Q Consensus 99 ~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~-------------g~~Y~g~~f~Rii~~f~iQgGd~ 165 (267)
..+.+|.|+ |+.|+|+||||++.||+||+||++||+|++ ++ |+|+.||||+|+|||||||+
T Consensus 21 ~~~~~v~l~-----t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~-Y~g~~FhRVi~~fmiQgGd~ 94 (191)
T 1w74_A 21 LATATATLH-----TNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPF-YDGAVFHRVIQGFMIQGGDP 94 (191)
T ss_dssp CCSEEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCS-STTEEEEEEETTTEEEECCT
T ss_pred CCCeEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCc-cCCCEEEEEeCCCEEecCCC
Confidence 345666666 889999999999999999999999998754 45 99999999999999999997
Q ss_pred CCCCCCCCccccCCCCCCC-cccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEc--CHHHHHHhhc
Q 024478 166 TEGDGTGGISIYGSSFEDE-SFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVID--GMDVVRKLES 242 (267)
Q Consensus 166 ~~~~g~gg~s~~g~~~~de-~~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~Vie--GmdVL~~I~~ 242 (267)
. ++|+|+ +|..|++| +..++|+++|+|||||.+||+++|||||++.+++|||++|+|||+|++ |||||++|++
T Consensus 95 ~-g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~ 170 (191)
T 1w74_A 95 T-GTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISK 170 (191)
T ss_dssp T-SSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHT
T ss_pred C-CCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHc
Confidence 5 677777 48889999 468999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCCCCCCCCCCCeEEEeeEEe
Q 024478 243 VETSRTDYPKVPCRIINSGEL 263 (267)
Q Consensus 243 ~~t~~~~~P~~~V~I~~cGvL 263 (267)
++++.+++|.++|+|.+|+++
T Consensus 171 ~~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 171 TATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp SCBCTTSCBSSCCEEEEEEEC
T ss_pred CCcCCCCCcCCCeEEEEEEEC
Confidence 999999999999999999985
No 28
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.1e-46 Score=329.56 Aligned_cols=157 Identities=49% Similarity=0.835 Sum_probs=148.1
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCC
Q 024478 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 179 (267)
Q Consensus 100 ~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~ 179 (267)
.++.|.|+ |++|+|+||||++.||+||+||++||+ ++| |+|+.||||+|+|||||||+. +++.++.++|+.
T Consensus 10 ~~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~--~g~-Ydg~~FhRVi~~F~iQgGd~~-~~g~gg~si~g~ 80 (203)
T 2k7n_A 10 QPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELAR--RGY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGK 80 (203)
T ss_dssp CCSEEEEE-----ESSCEEEEEECTTTCTTHHHHHHHHHH--HTC-GGGCEEEEEETTTEEEEECSS-SSSSCCCTTSCS
T ss_pred CCCEEEEE-----eCCCcEEEEEccCCCcHHHHHHHHHHh--cCc-cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCC
Confidence 34678887 789999999999999999999999995 678 999999999999999999987 788899999999
Q ss_pred CCCCCc-ccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEE
Q 024478 180 SFEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRII 258 (267)
Q Consensus 180 ~~~de~-~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I~ 258 (267)
.|++|. ..++|.++|+|+|||.+||+++|||||++.+++|||++|+|||+|++|||||++|++++++++++|.++|+|.
T Consensus 81 ~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~ 160 (203)
T 2k7n_A 81 QFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKII 160 (203)
T ss_dssp CBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEE
T ss_pred cccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEE
Confidence 999998 5889988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEecC
Q 024478 259 NSGELPL 265 (267)
Q Consensus 259 ~cGvL~~ 265 (267)
+|+++..
T Consensus 161 ~~~v~~~ 167 (203)
T 2k7n_A 161 KAYPSGG 167 (203)
T ss_dssp EEEECCC
T ss_pred EEEEEec
Confidence 9999864
No 29
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=8.5e-47 Score=323.97 Aligned_cols=147 Identities=54% Similarity=0.849 Sum_probs=140.0
Q ss_pred CeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCCCCCCCcc-cccC
Q 024478 112 GKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF-VLKH 190 (267)
Q Consensus 112 ~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~~~~de~~-~l~h 190 (267)
.|++|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|||||||+. ++|.|+.++||..|++|.. .++|
T Consensus 27 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h 102 (176)
T 2a2n_A 27 HTSMGDIHTKLFPVECPKTVENFCVHSR--NGY-YNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEFEDEFHSTLRH 102 (176)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTTCCS
T ss_pred EecCccEEEEEeCCCChHHHHHHHHHhh--cCc-cCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCcccccccccccc
Confidence 3899999999999999999999999995 678 999999999999999999986 7889999999999999988 6899
Q ss_pred CCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCC-CCCCCCCCeEEEeeEE
Q 024478 191 VGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETS-RTDYPKVPCRIINSGE 262 (267)
Q Consensus 191 ~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~-~~~~P~~~V~I~~cGv 262 (267)
.++|+|+||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++ .+++|.++|+|.+|.+
T Consensus 103 ~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 103 DRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp CSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred CCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998 6899999999999875
No 30
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-46 Score=326.86 Aligned_cols=149 Identities=38% Similarity=0.618 Sum_probs=136.0
Q ss_pred eeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeC-----CCCCCCCCCCcccc-------CCC
Q 024478 113 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGG-----DFTEGDGTGGISIY-------GSS 180 (267)
Q Consensus 113 t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgG-----d~~~~~g~gg~s~~-------g~~ 180 (267)
|+.|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|||||| |++ ++|.|+.++| |..
T Consensus 13 T~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~g~gg~si~~~~~~~~g~~ 88 (201)
T 3bo7_A 13 TTQGSLNIELHADMAPRACDSFLRLCA--VKY-FDDTIFHRCIRNFMIQGGRAELRQPS-KKKEVQQSPRSISGFPGGAP 88 (201)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHH--TTT-TTTCBEEEEETTTEEEECCGGGCCC--------CCSSCCCSSTTCCC
T ss_pred eCCCCEEEEEcCCCCcHHHHHHHHHHh--cCc-cCCCEEEEeeCCCEEEcCcccccCCC-CCCCCCccccccccccCCCc
Confidence 789999999999999999999999995 788 999999999999999999 986 7888999999 889
Q ss_pred CCCCc-ccccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHHHHHhhcCCCCCCCCCCCCeEEEe
Q 024478 181 FEDES-FVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIIN 259 (267)
Q Consensus 181 ~~de~-~~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdVL~~I~~~~t~~~~~P~~~V~I~~ 259 (267)
|++|. ..++|+++|+||||+.+|++++|||||++.+++|||++|+|||+|++|||||++|++++++.+++|.++|+|.+
T Consensus 89 f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~ 168 (201)
T 3bo7_A 89 FEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVEE 168 (201)
T ss_dssp BCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCCBEEE
T ss_pred ccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 99994 78899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecC
Q 024478 260 SGELPL 265 (267)
Q Consensus 260 cGvL~~ 265 (267)
|++|..
T Consensus 169 ~~v~~d 174 (201)
T 3bo7_A 169 IIVFKN 174 (201)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999853
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=318.91 Aligned_cols=160 Identities=38% Similarity=0.677 Sum_probs=148.1
Q ss_pred cccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCc
Q 024478 95 ELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI 174 (267)
Q Consensus 95 ~~~~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~ 174 (267)
...+..+.+|+|+ |++|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|||||||+. ++|.|+.
T Consensus 18 ~~~~~~~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~ 88 (185)
T 2hq6_A 18 GSEPPTNGKVLLK-----TTAGDIDIELWSKEAPKACRNFIQLCL--EAY-YDNTIFHRVVPGFIVQGGDPT-GTGSGGE 88 (185)
T ss_dssp TCCCCCBCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHHH--TTT-TTTEECCEEETTTEEEECCTT-SSSSCCC
T ss_pred ccCCCCCCEEEEE-----eCCccEEEEEeCCCCcHHHHHHHHHhh--cCc-cCCCEEEEEECCCEEEcCCCC-CCCCCCC
Confidence 3446677889998 688999999999999999999999995 678 999999999999999999986 7889999
Q ss_pred cccCCCCCCCcc-cccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCCCCeEEEEEEcCHHH--HHHhhcCCCCCCCCC
Q 024478 175 SIYGSSFEDESF-VLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDV--VRKLESVETSRTDYP 251 (267)
Q Consensus 175 s~~g~~~~de~~-~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdV--L~~I~~~~t~~~~~P 251 (267)
++||..|++|.. .++|+++|+|+|||.+|++++|||||++.++++||++|+|||+|+ ||++ +++|++++++++++|
T Consensus 89 si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P 167 (185)
T 2hq6_A 89 SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERP 167 (185)
T ss_dssp CTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCB
T ss_pred cccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCC
Confidence 999999999986 688999999999999999999999999999999999999999999 8876 478999999999999
Q ss_pred CCCeEEEeeEEec
Q 024478 252 KVPCRIINSGELP 264 (267)
Q Consensus 252 ~~~V~I~~cGvL~ 264 (267)
.++|+|.+|+++.
T Consensus 168 ~~~v~I~~~~v~~ 180 (185)
T 2hq6_A 168 HNPHKIKSCEVLF 180 (185)
T ss_dssp SSCCEEEEEEEEE
T ss_pred CCCeEEEEEEEeC
Confidence 9999999999985
No 32
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=3.3e-45 Score=311.24 Aligned_cols=154 Identities=32% Similarity=0.530 Sum_probs=138.4
Q ss_pred ccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCC
Q 024478 100 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGS 179 (267)
Q Consensus 100 ~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~ 179 (267)
.+++|+|+ |++|+|+||||++.||+||+||++|| ++|| |+|+.||||+|+|||||||++...+ ...++.
T Consensus 3 ~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~g~ 71 (166)
T 1v9t_A 3 GDPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV--NSGF-YNNTTFHRVIPGFMIQGGGFTEQMQ---QKKPNP 71 (166)
T ss_dssp CSCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBEEEEETTTEEEESSBCTTCC---BCCCCC
T ss_pred CCeEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHh--ccCC-CCCCEEEEEECCcEEEcCCcCcCCC---CCCCCC
Confidence 45788888 88999999999999999999999999 4788 9999999999999999999875432 234578
Q ss_pred CCCCCcccccCCCCeEEEEeeC-CCCCCCceeEEEccCCCCCCCC-----CeEEEEEEcCHHHHHHhhcCCCCC----CC
Q 024478 180 SFEDESFVLKHVGPGVLSMANA-GPNTNGSQFFICTVKTPWLDNR-----HVVFGHVIDGMDVVRKLESVETSR----TD 249 (267)
Q Consensus 180 ~~~de~~~l~h~~~G~lsma~~-gp~s~gSqFfItl~~~p~LDg~-----~tVFG~VieGmdVL~~I~~~~t~~----~~ 249 (267)
+|++|.....|+.+|+|||||. +|++++|||||++.+++|||++ |+|||+|++|||||++|++.+++. ++
T Consensus 72 ~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~ 151 (166)
T 1v9t_A 72 PIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQN 151 (166)
T ss_dssp CBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEE
T ss_pred cccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCC
Confidence 8999987666668999999997 6999999999999999999998 999999999999999999999976 57
Q ss_pred CCCCCeEEEeeEEec
Q 024478 250 YPKVPCRIINSGELP 264 (267)
Q Consensus 250 ~P~~~V~I~~cGvL~ 264 (267)
+|.++|+|.+|++++
T Consensus 152 ~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 152 VPSKPVVILSATVLP 166 (166)
T ss_dssp EESSCCBEEEEEECC
T ss_pred CcCCCeEEEEEEEeC
Confidence 999999999999874
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=5.5e-45 Score=309.34 Aligned_cols=145 Identities=37% Similarity=0.609 Sum_probs=132.7
Q ss_pred eeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCCCCCCCccc-ccCC
Q 024478 113 KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESFV-LKHV 191 (267)
Q Consensus 113 t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~~~~de~~~-l~h~ 191 (267)
|+.|+|+||||++.||+||+||++||+ +|| |+|+.||||+|+|||||||++.+. +.++++.+|++|... ++|
T Consensus 6 T~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~~~~l~~- 78 (164)
T 1lop_A 6 TNHGDIVIKTFDDKAPETVKNFLDYCR--EGF-YNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEANNGLKN- 78 (164)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHH--TTT-TTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCCCSSCCC-
T ss_pred eCCCCEEEEEeCCCCcHHHHHHHHHHh--cCC-CCCCEEEEEeCCceEecCCcccCC---CcCCCCCcccccccccccc-
Confidence 889999999999999999999999994 788 999999999999999999987543 456778999999875 555
Q ss_pred CCeEEEEeeC-CCCCCCceeEEEccCCCCCCCC--------CeEEEEEEcCHHHHHHhhcCCCCC----CCCCCCCeEEE
Q 024478 192 GPGVLSMANA-GPNTNGSQFFICTVKTPWLDNR--------HVVFGHVIDGMDVVRKLESVETSR----TDYPKVPCRII 258 (267)
Q Consensus 192 ~~G~lsma~~-gp~s~gSqFfItl~~~p~LDg~--------~tVFG~VieGmdVL~~I~~~~t~~----~~~P~~~V~I~ 258 (267)
.+|+|||||. +|++++|||||++.+++|||++ |+|||+|++|||||++|++++++. +++|.++|+|.
T Consensus 79 ~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~ 158 (164)
T 1lop_A 79 TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVIIE 158 (164)
T ss_dssp CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEEE
T ss_pred CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEEE
Confidence 7999999975 7999999999999999999998 999999999999999999999875 58999999999
Q ss_pred eeEEec
Q 024478 259 NSGELP 264 (267)
Q Consensus 259 ~cGvL~ 264 (267)
+|++++
T Consensus 159 ~~~v~~ 164 (164)
T 1lop_A 159 SVTVSE 164 (164)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999974
No 34
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-44 Score=321.38 Aligned_cols=160 Identities=36% Similarity=0.605 Sum_probs=146.1
Q ss_pred cccccccceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCc
Q 024478 95 ELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGI 174 (267)
Q Consensus 95 ~~~~~~~~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~ 174 (267)
...+..+.+|+|+ |++|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|||||||++ ++|+|+.
T Consensus 15 ~~~p~~~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~--~g~-Ydgt~FhRVi~~FmiQgGdp~-~~G~Gg~ 85 (232)
T 3bkp_A 15 YFQGSTRGKVVLH-----TSLGDLDVELWARECPLACRNFVQLCL--EGY-YVNTIFHRVVKDFIVQGGDPT-GTGRGGA 85 (232)
T ss_dssp GCCCSCBCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHHH--HTT-TTTCBEEEEETTTEEEECCTT-SSSSCCC
T ss_pred cccCCCCCEEEEE-----ECCCcEEEEEcCCCCcHHHHHHHHHhh--cCc-cCCCEEEEEeCCCEEEcCCCC-CCCCCCC
Confidence 3456677889888 789999999999999999999999995 678 999999999999999999987 7899999
Q ss_pred ccc--CCCCCCCcc-cccCCCCeEEEEeeCCC--------------CCCCceeEEEccCCCCCCCCCeEEEEEEcCHHH-
Q 024478 175 SIY--GSSFEDESF-VLKHVGPGVLSMANAGP--------------NTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDV- 236 (267)
Q Consensus 175 s~~--g~~~~de~~-~l~h~~~G~lsma~~gp--------------~s~gSqFfItl~~~p~LDg~~tVFG~VieGmdV- 236 (267)
++| |..|++|.. .++|+.+|+|+||+.++ ++++|||||++.+++|||++|+|||+|+ ||+|
T Consensus 86 si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~ 164 (232)
T 3bkp_A 86 DTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLY 164 (232)
T ss_dssp CCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHH
T ss_pred ccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchH
Confidence 999 899999985 68899999999999987 6999999999999999999999999999 6655
Q ss_pred -HHHhhcCCCCCCCCCCCCeEEEeeEEec
Q 024478 237 -VRKLESVETSRTDYPKVPCRIINSGELP 264 (267)
Q Consensus 237 -L~~I~~~~t~~~~~P~~~V~I~~cGvL~ 264 (267)
|++|++++++.+++|.++|+|.+|++|.
T Consensus 165 ~v~kI~~~~t~~~~~P~~~i~I~~~~vl~ 193 (232)
T 3bkp_A 165 NLMKFNDLEVGKEDRPMTPPFIKSVDVLW 193 (232)
T ss_dssp HHHHHTTSCBCGGGCBSSCCBEEEEEEEE
T ss_pred HHHHHHcCCcCCCCCcCCCeEEEEEEEEc
Confidence 8999999999999999999999999985
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=3.5e-44 Score=305.07 Aligned_cols=151 Identities=32% Similarity=0.474 Sum_probs=134.2
Q ss_pred ceEEEEEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCCCC
Q 024478 102 TKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSF 181 (267)
Q Consensus 102 ~~v~fdi~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~~~ 181 (267)
+.|.|+ |++|+|+||||++.||+||+||++||+ .+| |+|+.||||+|+|||||||++...+ ...++.++
T Consensus 4 ~~v~l~-----T~~G~i~ieL~~~~aP~t~~NF~~L~~--~g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~~~~~ 72 (167)
T 3s6m_A 4 SMVELH-----TNHGVIKLELDEAKAPKTVENFLNYVK--KGH-YDGTIFHRVINGFMIQGGGFEPGLK---QKPTDAPI 72 (167)
T ss_dssp CEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHH--HTT-TTTEECCEEETTTEEEESSEETTTE---ECCCCCCB
T ss_pred cEEEEE-----eCCceEEEEEeCCCCcHHHHHHHHHhh--hcc-cCCCEeEEecCCcEEEeccccCCCC---CCCCCCcc
Confidence 455555 899999999999999999999999995 677 9999999999999999999875432 24457788
Q ss_pred CCCcccccCCCCeEEEEee-CCCCCCCceeEEEccCCCCCCCC--------CeEEEEEEcCHHHHHHhhcCCCCC----C
Q 024478 182 EDESFVLKHVGPGVLSMAN-AGPNTNGSQFFICTVKTPWLDNR--------HVVFGHVIDGMDVVRKLESVETSR----T 248 (267)
Q Consensus 182 ~de~~~l~h~~~G~lsma~-~gp~s~gSqFfItl~~~p~LDg~--------~tVFG~VieGmdVL~~I~~~~t~~----~ 248 (267)
++|.....++.+|+||||| .+|++++|||||++.+++|||++ |+|||+|++|||||++|+++++++ +
T Consensus 73 ~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~ 152 (167)
T 3s6m_A 73 ANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQ 152 (167)
T ss_dssp CCCGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CB
T ss_pred CCcccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccC
Confidence 8887544445899999999 57999999999999999999998 999999999999999999999987 6
Q ss_pred CCCCCCeEEEeeEEe
Q 024478 249 DYPKVPCRIINSGEL 263 (267)
Q Consensus 249 ~~P~~~V~I~~cGvL 263 (267)
++|.++|+|.+|.+|
T Consensus 153 ~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 153 DVPNDDVVIEKAVVV 167 (167)
T ss_dssp TCBSSCCEEEEEEEC
T ss_pred CCcCCCeEEEEEEEC
Confidence 899999999999886
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=3.5e-37 Score=289.84 Aligned_cols=141 Identities=28% Similarity=0.414 Sum_probs=120.1
Q ss_pred ccccceEE--EEEEECC---eeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCC
Q 024478 98 AKVTTKVF--FDVDIGG---KPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTG 172 (267)
Q Consensus 98 ~~~~~~v~--fdi~i~~---t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~g 172 (267)
|..+.+++ |++.+.+ ++.|+|+||||++.||+||+||++||+ +|| |+|+.|||| ++|||||||++ ++|+|
T Consensus 165 P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~--~Gf-YdGt~FHRV-~gFmIQgGDp~-g~G~G 239 (369)
T 3rfy_A 165 PLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVE--RHF-YDGMEIQRS-DGFVVQTGDPE-GPAEG 239 (369)
T ss_dssp CEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHH--TTT-TTTEECEEE-EEEEECCCCCC-CCCSC
T ss_pred ccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhh--cCC-cCCCeeeee-CCeeEecCCCC-CCCCC
Confidence 33444444 4444332 369999999999999999999999994 788 999999999 99999999987 55555
Q ss_pred ---------------------CccccCCCCCCCcc-----cccCCCCeEEEEeeC--CCCCCCceeEEEc-------cCC
Q 024478 173 ---------------------GISIYGSSFEDESF-----VLKHVGPGVLSMANA--GPNTNGSQFFICT-------VKT 217 (267)
Q Consensus 173 ---------------------g~s~~g~~~~de~~-----~l~h~~~G~lsma~~--gp~s~gSqFfItl-------~~~ 217 (267)
+.++|+..|++|++ .++|+.+|+|+|||. +||+++|||||++ .+.
T Consensus 240 ~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~ 319 (369)
T 3rfy_A 240 FIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNS 319 (369)
T ss_dssp CCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCC
T ss_pred ccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCC
Confidence 35677888888764 688999999999997 8999999999999 468
Q ss_pred CCCCCCCeEEEEEEcCHHHHHHhhcC
Q 024478 218 PWLDNRHVVFGHVIDGMDVVRKLESV 243 (267)
Q Consensus 218 p~LDg~~tVFG~VieGmdVL~~I~~~ 243 (267)
+|||++|+|||+|++|||||++|++.
T Consensus 320 ~~LDgkytVFG~VveGmdVVdkI~~G 345 (369)
T 3rfy_A 320 NILDGRYAVFGYVTDNEDFLADLKVG 345 (369)
T ss_dssp SSSCSCEEEEEEEEESTTGGGGCCTT
T ss_pred cccCCCeeEEEEEecCHHHHHHHhCC
Confidence 99999999999999999999999984
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=94.48 E-value=0.18 Score=42.71 Aligned_cols=116 Identities=15% Similarity=0.199 Sum_probs=64.3
Q ss_pred EEEEEEECCeeeee-EEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcC--cEEEeCCCCCCCCCCCccccCCC
Q 024478 104 VFFDVDIGGKPAGR-IVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKD--FMIQGGDFTEGDGTGGISIYGSS 180 (267)
Q Consensus 104 v~fdi~i~~t~~G~-IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~--f~iQgGd~~~~~g~gg~s~~g~~ 180 (267)
-|+.|++. ..|- ++.+|..+.||+||+.|+++- - |.+..+|-..-+ .++--+++.. ..
T Consensus 22 r~i~itl~--~~g~~~~A~Lldd~APkTcaA~~~~L---P---~~~~viHarwSGeeVy~~lp~f~~-----------~~ 82 (188)
T 3kop_A 22 RYINITLE--KRGVTCKALLLDDVAPRTSKAVWDAL---P---QSSQVFHGKYARNEIYNLVPAFAP-----------KE 82 (188)
T ss_dssp CEEEEEET--TTTEEEEEEECTTTSHHHHHHHHHHC---C---EEEECEECSSSSSEEEEEEECCSS-----------SC
T ss_pred eEEEEEEe--cCCeEEEEEEccccChHHHHHHHHhC---C---CCcceEEEEEecceEEEECCcccc-----------cC
Confidence 35667764 3454 899999999999999999975 1 333333322221 2232333210 11
Q ss_pred CCCCcccccCCCCeEEEEeeC-----C-------C------CCCCceeEEEccCCC--------CCCCCCeEEEEEEcCH
Q 024478 181 FEDESFVLKHVGPGVLSMANA-----G-------P------NTNGSQFFICTVKTP--------WLDNRHVVFGHVIDGM 234 (267)
Q Consensus 181 ~~de~~~l~h~~~G~lsma~~-----g-------p------~s~gSqFfItl~~~p--------~LDg~~tVFG~VieGm 234 (267)
...||... +..+|-|++-.. | + .....++.|-.+.+. |+-| .+|++|+||+
T Consensus 83 ~g~EN~T~-~P~pGDIl~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpG--N~F~TIveGl 159 (188)
T 3kop_A 83 PGAENTTV-TPIPGDVCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPG--NVFATIVEGL 159 (188)
T ss_dssp CCSCSEES-SCCTTEEEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCE--EEEEEEEESH
T ss_pred CCcCCCCC-CCCCCcEEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecC--cEEEEEecCH
Confidence 23344332 335677776311 1 0 111235666555433 4444 7999999999
Q ss_pred HHHHHhh
Q 024478 235 DVVRKLE 241 (267)
Q Consensus 235 dVL~~I~ 241 (267)
|-|.++-
T Consensus 160 e~la~~c 166 (188)
T 3kop_A 160 DEMAAAC 166 (188)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9876654
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=92.81 E-value=0.23 Score=40.93 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=61.7
Q ss_pred EEEECCeeeeeEEEEEcCCCChHHHHHHHHHhccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCCCCCCCcc
Q 024478 107 DVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESF 186 (267)
Q Consensus 107 di~i~~t~~G~IvIeL~~~~aP~tv~NF~~Lc~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~~~~de~~ 186 (267)
.|.+++ ..++++|+.+.||+||+.|+++- - +.. .+.+. .+ -+-+ +.... -..+ |+.
T Consensus 33 ~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~L---P---l~~-~~~~~-g~-E~y~-~lp~~----------l~~~-en~ 88 (153)
T 2nnz_A 33 RIRFES---AECEVELYEEWAPETVRAIADAL---P---IKS-TANRW-GD-EIYF-TTQVA----------VEKE-ENS 88 (153)
T ss_dssp EEEETT---EEEEECCCTTSCHHHHHHHHHTC---S---EEE-EEEEE-TT-EEEE-CCSCC----------CCCS-SCC
T ss_pred EEEECC---EEEEEEEcCCCCHHHHHHHHHhC---C---cEE-EHHhh-CC-cEEE-ECCCC----------CCCC-CCC
Confidence 445555 66999999999999999999986 1 211 12221 11 1111 11100 0111 222
Q ss_pred cccCCCCeEEEEeeCCCCCCCceeEEEccCCCCCCC------CCeEEEEEEcCHHHHHHhh
Q 024478 187 VLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDN------RHVVFGHVIDGMDVVRKLE 241 (267)
Q Consensus 187 ~l~h~~~G~lsma~~gp~s~gSqFfItl~~~p~LDg------~~tVFG~VieGmdVL~~I~ 241 (267)
.....+|-|++-..+. .+.|-.++.|...+ .-.+||+|++|++.|.++.
T Consensus 89 -~~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 89 -KDVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp -BCCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred -cccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 2344689998875432 37777887753322 2488999999987776654
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=65.65 E-value=18 Score=28.96 Aligned_cols=94 Identities=16% Similarity=0.187 Sum_probs=54.8
Q ss_pred eeEEEEEcCCCChHHHHHHHHHh--ccCCCcccCCCEEEEEEcCcEEEeCCCCCCCCCCCccccCCCCC-CCcccccCCC
Q 024478 116 GRIVMGLFGDVVPKTAENFRALC--TGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFE-DESFVLKHVG 192 (267)
Q Consensus 116 G~IvIeL~~~~aP~tv~NF~~Lc--~g~~g~~Y~g~~f~Rii~~f~iQgGd~~~~~g~gg~s~~g~~~~-de~~~l~h~~ 192 (267)
..++.+|+.. |.|++.|++.- ++.-.. |. .-++=..|.. .+ +|+. ..-..
T Consensus 22 ~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~~-~g-~E~y~~~p~~----------------------l~~~e~~-~~~~~ 74 (136)
T 1zx8_A 22 GKCVIDLNEE--YEVVKLLKEKIPFESVVNT-WG-EEIYFSTPVN----------------------VQKMENP-REVVE 74 (136)
T ss_dssp CEEEEEEETT--SHHHHHHHHHCSEEEECEE-SS-SEEEEECSCC----------------------CCCCSSE-ESSBC
T ss_pred cEEEEEEcCC--HHHHHHHHHHCCcEEEHHH-hC-CcEEEECCcc----------------------CCCCCCC-CccCC
Confidence 5689999755 78999999885 111111 32 2222111211 11 1111 12236
Q ss_pred CeEEEEeeCCCCCCCceeEEEccCCCCCCC------CCeEEEEEEcCHHHHHHhh
Q 024478 193 PGVLSMANAGPNTNGSQFFICTVKTPWLDN------RHVVFGHVIDGMDVVRKLE 241 (267)
Q Consensus 193 ~G~lsma~~gp~s~gSqFfItl~~~p~LDg------~~tVFG~VieGmdVL~~I~ 241 (267)
.|-|+.-..+. -|-|-.++.|...+ .-.+||+|.+|++.|..+.
T Consensus 75 ~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 75 IGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp TTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred CCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 78888876543 47777888764433 3589999999977766554
Done!