BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>024481
MSRQPMTSTTSLRLLATRSCPTSAVLLPEATLLVEFLLPMNLHLIVTFLFTRKWLWLERY
MLLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQE
KDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQ
RKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDV
LLIDNLAVLHARRSSSRPRHILASLCK

High Scoring Gene Products

Symbol, full name Information P value
AT3G21360 protein from Arabidopsis thaliana 3.8e-78

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  024481
        (267 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2089423 - symbol:AT3G21360 species:3702 "Arabi...   786  3.8e-78   1
ASPGD|ASPL0000041251 - symbol:AN2698 species:162425 "Emer...   117  2.4e-10   2


>TAIR|locus:2089423 [details] [associations]
            symbol:AT3G21360 species:3702 "Arabidopsis thaliana"
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR003819 Pfam:PF02668 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0016491
            EMBL:AP001305 UniGene:At.47366 UniGene:At.63567 EMBL:AK117772
            IPI:IPI00537078 RefSeq:NP_188773.1 PDB:1Y0Z PDB:2Q4A PDBsum:1Y0Z
            PDBsum:2Q4A ProteinModelPortal:Q9LIG0 SMR:Q9LIG0 PaxDb:Q9LIG0
            PRIDE:Q9LIG0 DNASU:821690 EnsemblPlants:AT3G21360.1 GeneID:821690
            KEGG:ath:AT3G21360 TAIR:At3g21360 eggNOG:NOG13343
            HOGENOM:HOG000272702 InParanoid:Q9LIG0 OMA:TEYPAHQ PhylomeDB:Q9LIG0
            ProtClustDB:CLSN2685103 EvolutionaryTrace:Q9LIG0
            Genevestigator:Q9LIG0 GermOnline:AT3G21360 Uniprot:Q9LIG0
        Length = 330

 Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
 Identities = 138/203 (67%), Positives = 170/203 (83%)

Query:    65 QFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDL 124
             +FPSKLFF+CE+EP  GG+TP+VLSH+VYERMK+ +PEFVQ+LE+ GL+Y R+  E DD 
Sbjct:   128 EFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRVLGEDDDP 187

Query:   125 TSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW 184
             +SP GRGWKS FLT DK+LAE+RA +LG+KLEW EDGG KTV+GPIPA+ YD+ R RK+W
Sbjct:   188 SSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRKVW 247

Query:   185 FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLID 244
             FNS+V AYT W+D +NDP KAVTFG+G P P DIV++ ++ILEEECVA+PWQ GDVLLID
Sbjct:   248 FNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLLID 307

Query:   245 NLAVLHARRSSSRPRHILASLCK 267
             N AVLH+RR    PR +LASLCK
Sbjct:   308 NWAVLHSRRPFDPPRRVLASLCK 330


>ASPGD|ASPL0000041251 [details] [associations]
            symbol:AN2698 species:162425 "Emericella nidulans"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0016491
            "oxidoreductase activity" evidence=IEA] InterPro:IPR003819
            Pfam:PF02668 GO:GO:0016491 EMBL:BN001306 EMBL:AACD01000047
            eggNOG:NOG13343 RefSeq:XP_660302.1 ProteinModelPortal:Q5B9T2
            EnsemblFungi:CADANIAT00010417 GeneID:2874296 KEGG:ani:AN2698.2
            HOGENOM:HOG000199867 OMA:YERRYNT OrthoDB:EOG4J14HW Uniprot:Q5B9T2
        Length = 401

 Score = 117 (46.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
 Identities = 27/66 (40%), Positives = 37/66 (56%)

Query:   203 VKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARR---SSSRPR 259
             V   TFG+G+P PE+ +  L +I +E  V   WQ+GDVL+ DN+   H R         R
Sbjct:   312 VAVQTFGDGTPIPEEYLATLARITDEIRVLHRWQDGDVLVFDNVIAQHGREPWEGEQGDR 371

Query:   260 HILASL 265
              +LASL
Sbjct:   372 VVLASL 377

 Score = 95 (38.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
 Identities = 25/87 (28%), Positives = 42/87 (48%)

Query:    63 LPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQ-EK 121
             +P  P  +FF+    P  GG+TP+  S  ++ R +   PEF+  L + G+  +  Y  E+
Sbjct:   151 VPHAPEYVFFYANRAPKKGGETPISSSLELFHRARAEIPEFIDLLVEKGVKSSVTYTVER 210

Query:   122 DDLTSPTGR-GWKSIFLTEDKSLAEER 147
               +   T R  +   F+ ED   A+ R
Sbjct:   211 QYVGGSTLRQAFGKEFVDEDDEQAKRR 237


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.433    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      267       254   0.00084  114 3  11 22  0.42    33
                                                     32  0.47    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  215 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.52u 0.10s 21.62t   Elapsed:  00:00:01
  Total cpu time:  21.52u 0.10s 21.62t   Elapsed:  00:00:01
  Start:  Fri May 10 09:16:36 2013   End:  Fri May 10 09:16:37 2013

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