Query 024481
Match_columns 267
No_of_seqs 191 out of 1149
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 08:57:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024481.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024481hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q4a_A Clavaminate synthase-li 100.0 4.9E-48 1.7E-52 351.5 19.6 254 14-267 63-330 (330)
2 1oih_A Putative alkylsulfatase 100.0 2.9E-35 1E-39 264.1 14.2 210 14-262 54-277 (301)
3 3eat_X Pyoverdine biosynthesis 100.0 2.5E-32 8.4E-37 244.5 15.0 202 14-264 57-276 (293)
4 1nx8_A CARC, carbapenem syntha 100.0 4.8E-32 1.7E-36 239.7 13.7 196 14-264 41-267 (273)
5 3r1j_A Alpha-ketoglutarate-dep 100.0 7.9E-32 2.7E-36 242.0 14.8 208 14-262 48-270 (301)
6 1otj_A Alpha-ketoglutarate-dep 100.0 3.4E-32 1.2E-36 242.0 12.0 210 13-262 43-268 (283)
7 3o2g_A Gamma-butyrobetaine dio 100.0 6.7E-31 2.3E-35 243.7 18.3 196 14-264 150-366 (388)
8 3pvj_A Alpha-ketoglutarate-dep 100.0 5E-31 1.7E-35 234.2 16.2 208 14-262 42-266 (277)
9 2og5_A Putative oxygenase; non 99.9 3.6E-26 1.2E-30 209.7 9.6 141 54-256 176-317 (357)
10 1ds1_A Clavaminate synthase 1; 99.9 2.6E-25 8.8E-30 201.4 10.4 156 49-264 135-298 (324)
11 2wbq_A L-arginine beta-hydroxy 99.9 1.5E-24 5.2E-29 198.8 7.3 158 54-256 165-322 (358)
12 1jr7_A GABT protein, hypotheti 99.9 7.6E-24 2.6E-28 188.7 10.0 177 14-261 80-293 (311)
13 3nnf_A CURA; non-HAEM Fe(II)/a 85.2 1.1 3.8E-05 39.5 5.2 30 225-255 228-257 (344)
14 2opw_A Phyhd1 protein; double- 77.8 1.6 5.6E-05 37.3 3.6 33 229-262 226-260 (291)
15 2fct_A Syringomycin biosynthes 69.8 3.2 0.00011 35.9 3.5 27 229-256 218-244 (313)
16 2a1x_A Phytanoyl-COA dioxygena 69.4 3.3 0.00011 35.8 3.5 33 229-262 214-248 (308)
17 2rdq_A 1-deoxypentalenic acid 65.4 3.1 0.00011 35.5 2.4 26 230-256 210-235 (288)
18 3emr_A ECTD; double stranded b 65.4 4 0.00014 35.6 3.2 32 230-262 229-262 (310)
19 3itq_A Prolyl 4-hydroxylase, a 58.6 5.4 0.00018 33.1 2.6 36 230-265 165-209 (216)
20 2jig_A Prolyl-4 hydroxylase; h 57.7 6.1 0.00021 32.6 2.8 37 229-265 169-214 (224)
21 1wdi_A Hypothetical protein TT 53.7 4.5 0.00015 36.0 1.4 19 235-253 52-70 (345)
22 1vky_A S-adenosylmethionine:tR 53.4 4.9 0.00017 35.8 1.6 20 235-254 62-81 (347)
23 1yy3_A S-adenosylmethionine:tR 52.5 4.6 0.00016 36.0 1.2 20 235-254 54-73 (346)
24 3gja_A CYTC3; halogenase, beta 44.4 11 0.00037 33.0 2.4 27 229-256 220-246 (319)
25 3pl0_A Uncharacterized protein 34.7 20 0.0007 30.4 2.5 25 231-255 199-224 (254)
26 3itq_A Prolyl 4-hydroxylase, a 31.7 16 0.00056 30.1 1.4 36 53-88 123-163 (216)
27 3rcq_A Aspartyl/asparaginyl be 28.9 31 0.0011 28.1 2.6 32 231-263 146-178 (197)
28 2jov_A Hypothetical protein CP 27.6 42 0.0014 23.5 2.7 33 212-244 27-59 (85)
29 3gt2_A Putative uncharacterize 27.3 23 0.00079 27.0 1.4 12 234-245 89-100 (142)
30 2jig_A Prolyl-4 hydroxylase; h 25.5 25 0.00084 28.8 1.4 36 53-88 110-153 (224)
31 2k1g_A Lipoprotein SPR; soluti 22.7 27 0.00091 26.6 1.0 11 234-244 67-77 (135)
32 3dkq_A PKHD-type hydroxylase S 21.6 51 0.0017 27.7 2.6 35 230-265 157-192 (243)
33 2rg4_A Uncharacterized protein 20.4 76 0.0026 25.8 3.4 33 231-264 169-202 (216)
34 1e5r_A Proline oxidase; oxidor 20.1 43 0.0015 29.0 1.9 33 231-263 140-172 (290)
No 1
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=100.00 E-value=4.9e-48 Score=351.47 Aligned_cols=254 Identities=58% Similarity=1.001 Sum_probs=216.1
Q ss_pred EEeecCCC-CCCcchhHHHHHhhhccccCcch------hhhccccC-------CccccccccccCCCCceEEEeeeecCC
Q 024481 14 LLATRSCP-TSAVLLPEATLLVEFLLPMNLHL------IVTFLFTR-------KWLWLERYMLLPQFPSKLFFFCEVEPV 79 (267)
Q Consensus 14 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~t~-------~~lwHtD~~y~~~~P~~~~l~c~~~p~ 79 (267)
++-++|.| .+...+..++.++|.+..++.+. +..++++. ...||+|++|.+.||++++|+|+++|+
T Consensus 63 vvlfRg~~~~~~~~~~~~~~~~G~~~~~~~g~~~~r~~v~~~v~~~~~~~~~~~~~~HtD~sy~~~pP~~~~L~c~~~p~ 142 (330)
T 2q4a_A 63 AVLFRGFPVNSADDFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQVREFPSKLFFYCEIEPK 142 (330)
T ss_dssp EEEECSSCCCSHHHHHHHHHHTCCCBCCCCSCSSCCEEEETTEEECCCSCTTSCEEEECTTTTSTTCCSEEEEEEEECCS
T ss_pred EEEECCCCCCCHHHHHHHHHHhCCCcccccCCCCccccccCccccCCCCCCccccccccccCCCCCCCceEEEECcCCCC
Confidence 56789999 57788889999999886555442 22234443 235899999999999999999999999
Q ss_pred CCCCCcceeHHHHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCCCCCCCccccccccCHHHHHHHHHhcCCceEEcc
Q 024481 80 SGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWME 159 (267)
Q Consensus 80 ~GGeT~~aD~~~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~e~~~~~~g~~~~w~~ 159 (267)
+||+|.|||+++||+.|+++.|++++.|++++|.|.+++....+..+..+.+|+..|++++++++|++|++.|+.++|.+
T Consensus 143 ~GG~T~~ad~~~ay~~L~~~~p~~~~~L~~~~~~~~~~~~~~~~~~s~~~~~w~~~f~~~~~~~~e~~~~~~g~~~~~~~ 222 (330)
T 2q4a_A 143 CGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRVLGEDDDPSSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTE 222 (330)
T ss_dssp EECCCCEEEHHHHHHHHHHHCHHHHHHHHHHCEEEEEEECSSBCTTSTTCCCHHHHTTCSSHHHHHHHHHHTTCCCEECT
T ss_pred cCCceeeecHHHHHHHhhhhCHHHHHHHHhCCeEEEEEccccccccccCCccHHHHhcCCCHHHHHHHHHhcCCceEEcC
Confidence 99999999999999999999999999999999999988766555556667899999999999999999999999999998
Q ss_pred CCceEEEEeeeCeeEecCCCCceEEeeccchhccccccCCCCCCcccccCCCCCCcHHHHHHHHHHhhccEEEeeccCCC
Q 024481 160 DGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGD 239 (267)
Q Consensus 160 dg~~~~~~~~~P~v~~hP~TG~~~lfn~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~~~~~~~~~~~~Wq~GD 239 (267)
+|....+...||+|++||.||+++|||+....+..+.+..+..+..+.++||++++.++++++.+++++++++|+|++||
T Consensus 223 ~~~~~~~~~~~Pvv~~hp~tg~~~lf~~~~~~~~~~~~~~~~~p~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~w~~GD 302 (330)
T 2q4a_A 223 DGGAKTVMGPIPAIKYDESRNRKVWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGD 302 (330)
T ss_dssp TSCEEEEEEEECSSEEETTTTEEECCSCHHHHHTTCCBTTBCHHHHEEETTSCCCCHHHHHHHHHHHHHHCBCCCCCTTC
T ss_pred CCceEEEEeccccEEecCCCCCeEEEechhhhccccccccccCccccccCCCCcCCHHHHHHHHHHHHhhEeecCCCCCC
Confidence 88765456789999999999999999986544312222222334567899999999999999998889999999999999
Q ss_pred EEEEeCcccccccCCCCCcceeeecccC
Q 024481 240 VLLIDNLAVLHARRSSSRPRHILASLCK 267 (267)
Q Consensus 240 vli~DN~rvlHgR~~f~g~R~ll~~~~~ 267 (267)
||||||+++||||++|+|+||++++|||
T Consensus 303 v~i~DN~~~lH~R~~f~g~rR~l~r~~~ 330 (330)
T 2q4a_A 303 VLLIDNWAVLHSRRPFDPPRRVLASLCK 330 (330)
T ss_dssp EEEEETTTEEEEECCEESCCEEEEEEBC
T ss_pred EEEEecccccccCCCCCCCceEEEeecC
Confidence 9999999999999999999999999986
No 2
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=100.00 E-value=2.9e-35 Score=264.13 Aligned_cols=210 Identities=16% Similarity=0.144 Sum_probs=142.6
Q ss_pred EEeecCCC-CCCcchhHHHHHhhhccccCcch-hh--hcccc-------CCccccccccccCCCCceEEEeeeecCCCCC
Q 024481 14 LLATRSCP-TSAVLLPEATLLVEFLLPMNLHL-IV--TFLFT-------RKWLWLERYMLLPQFPSKLFFFCEVEPVSGG 82 (267)
Q Consensus 14 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~t-------~~~lwHtD~~y~~~~P~~~~l~c~~~p~~GG 82 (267)
++-++|.| .+...+.+++.++|.+...++.. .. ..+++ ....||+|++|.+.||.+++|+|+++|++||
T Consensus 54 vv~fRg~~~l~~~~~~~~~~~fG~l~~~~~~~~~~~~~~v~~v~~~~~~~~~~wHtD~sy~~~pP~~~~L~c~~~p~~GG 133 (301)
T 1oih_A 54 VIFFRGQTHLDDQSQEGFAKLLGEPVAHPTVPVVDGTRYLLQLDGAQGQRANSWHTDVTFVEAYPKASILRSVVAPASGG 133 (301)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBCC----CCCTTCSSCEEEC-----CCCSCBCTTTTSSSCCSEEEEEEEECCSSCC
T ss_pred EEEECCCCCCCHHHHHHHHHHhCCCccCcCCCCCCCCCceEEEecCCCCcCcCCEecccCcCCCCceEEEEEeecCCCCC
Confidence 66789999 77888889999999987554321 10 01111 1345999999999999999999999999999
Q ss_pred CCcceeHHHHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCCCCCCCccccccccCHHHHHHHHHhcCCceEEccCCc
Q 024481 83 DTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGG 162 (267)
Q Consensus 83 eT~~aD~~~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~e~~~~~~g~~~~w~~dg~ 162 (267)
+|.|||+++||+.|+ ++++++|+.+.+.|...+.. +..|+.. +++ ++++.+ +|..++.
T Consensus 134 ~T~~ad~~~ay~~L~---~~~~~~~~~l~~~~~~~~~~--------~~~~~~~--~~~--~~~~~~-------~~~~~~~ 191 (301)
T 1oih_A 134 DTVWANTAAAYQELP---EPLRELADKLWAVHSNEYDY--------ASLKPDI--DPA--KLERHR-------KVFTSTV 191 (301)
T ss_dssp CEEEEEHHHHHHTSC---HHHHHHHHHCEEEEECC--------------------------------------------C
T ss_pred ccccccHHHHHHhCC---HHHHHHHhcCEEEEcccccc--------ccccccc--ccc--hhhhhh-------hhhhccC
Confidence 999999999999999 67888888777666532211 1234322 111 223222 2444442
Q ss_pred eEEEEeeeCeeEecCCCCceEEeeccchhccccccCCCCCCcccccCCCCCCcHHHHHHHHHHh--hccEEEeeccCCCE
Q 024481 163 VKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGDV 240 (267)
Q Consensus 163 ~~~~~~~~P~v~~hP~TG~~~lfn~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~~~~--~~~~~~~~Wq~GDv 240 (267)
....||+|++||+||+++||++....++. |...+.++++|+.|.+.+ ++++|+|+|++|||
T Consensus 192 ---~~~~hPvV~~hP~tG~~~l~~~~~~~~i~--------------gl~~~e~~~ll~~l~~~~~~~~~~~~~~w~~GDv 254 (301)
T 1oih_A 192 ---YETEHPVVRVHPISGERALQLGHFVKRIK--------------GYSLADSQHLFAVLQGHVTRLENTVRWRWEAGDV 254 (301)
T ss_dssp ---CEEEEESEEECTTTCCEEECCSTTEEEET--------------TSCHHHHHHHHHHHHHHHTSGGGEEEECCCTTCE
T ss_pred ---CceECCCEEecCCCCcEEEEeccCccccc--------------CCCHHHHHHHHHHHHHHHhCccceEEEEEcCCCE
Confidence 34589999999999999999873333332 222244567778887755 88999999999999
Q ss_pred EEEeCcccccccCCCCC-cceee
Q 024481 241 LLIDNLAVLHARRSSSR-PRHIL 262 (267)
Q Consensus 241 li~DN~rvlHgR~~f~g-~R~ll 262 (267)
|||||+++||+|++|+| .||+|
T Consensus 255 vi~DNr~~lH~r~~f~~~~~R~l 277 (301)
T 1oih_A 255 AIWDNRATQHYAVDDYGTQPRIV 277 (301)
T ss_dssp EEEETTSEEEEECCCCTTSCCEE
T ss_pred EEEEccceeecccCCCCCCceEE
Confidence 99999999999999976 24444
No 3
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=99.98 E-value=2.5e-32 Score=244.51 Aligned_cols=202 Identities=16% Similarity=0.189 Sum_probs=141.8
Q ss_pred EEeecCCC--CCCcchhHHHHHhhhccccCcchh---------hhccccCCc-cccccccccCCCCceEEEeeeecCC--
Q 024481 14 LLATRSCP--TSAVLLPEATLLVEFLLPMNLHLI---------VTFLFTRKW-LWLERYMLLPQFPSKLFFFCEVEPV-- 79 (267)
Q Consensus 14 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~t~~~-lwHtD~~y~~~~P~~~~l~c~~~p~-- 79 (267)
++-++|.| .+...+.+++.++|.++...++.+ .+.+||+.. .||+|++|.+.||.+++|+|+++|+
T Consensus 57 vv~fRgq~~l~~~~~~~~~a~~fG~l~~~~~g~~~~v~~~~~~~~~~yt~~~~~wHtD~sy~~~pp~~~~L~c~~~p~~~ 136 (293)
T 3eat_X 57 LLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVLELVEQEGAEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDS 136 (293)
T ss_dssp EEEECSCBCCSSHHHHHHHHHHHSCBCCBTTBSCEEEEECTTCCCTTTSCSCEEEECTTTTSSEEEEEEEEEEEECCSCC
T ss_pred EEEECCCCCCCCHHHHHHHHHHhCCCccccccCeEEEEeCCCcccccccCCCccceECCCCcCCCCceEEEEeEeCCCCC
Confidence 56789998 377778899999999987766543 234677643 5899999999999999999999998
Q ss_pred CCCCCcceeHHHHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCCCCCCCccccccccCHHHHHHHHHhcCCceEEcc
Q 024481 80 SGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWME 159 (267)
Q Consensus 80 ~GGeT~~aD~~~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~e~~~~~~g~~~~w~~ 159 (267)
.||+|.|||+++||+.|+ |+++++|++..+.|.... . .++... ....++-.+
T Consensus 137 ~GG~T~~~d~~~ay~~L~---~~~~~~l~~~~~~~~~~~-~--------------~~~~~~----------~~p~~~~~~ 188 (293)
T 3eat_X 137 DGGRTTFSSTPAALQLAD---SSELELWRRASGRYQRSA-A--------------HYSSRS----------AAPIVERHP 188 (293)
T ss_dssp SBCCEEEEEHHHHHHHCC---HHHHHHHHHCEEEEECC--------------------CEE----------EEESEEECT
T ss_pred CCCceEEeeHHHHHHhCC---HHHHHHHhhCceEEEecc-c--------------cccCcc----------CCceEEECC
Confidence 899999999999999999 899999999888775210 0 000000 000011111
Q ss_pred CCceEEEEeeeCeeEe-cCCCCceEEeeccchhccccccCCCCCCcccccCCCCCCcHHHHHHHHHHh--hccEEEeecc
Q 024481 160 DGGVKTVLGPIPAVTY-DKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQ 236 (267)
Q Consensus 160 dg~~~~~~~~~P~v~~-hP~TG~~~lfn~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~~~~--~~~~~~~~Wq 236 (267)
...||+|++ ||+||++++|.+.....+ .|...+.++++++.|.+.+ ++++|+|+|+
T Consensus 189 -------~~~hp~Vr~~hP~tG~k~L~v~~~~~~i--------------~g~~~~es~~ll~~L~~~~~~p~~~~~~~w~ 247 (293)
T 3eat_X 189 -------RREFPILRFCEPPVEGDASFINPSEFHY--------------DGIAPEQRGELLASLRRCLYHPQAHYAHRWR 247 (293)
T ss_dssp -------TTCCEEECCCCCC----------CCEEE--------------ESSCTTTHHHHHHHHHHHHTSTTTEEEECCC
T ss_pred -------CCCcceEEecCCCCcccceecCcccccc--------------CCCCHHHHHHHHHHHHHHHhCcccEEEEEcC
Confidence 237999999 899999998755444443 2333456778888887654 5799999999
Q ss_pred CCCEEEEeCcccccccCCCCC-cceeeec
Q 024481 237 NGDVLLIDNLAVLHARRSSSR-PRHILAS 264 (267)
Q Consensus 237 ~GDvli~DN~rvlHgR~~f~g-~R~ll~~ 264 (267)
+||||||||+++||+|.+|.+ .+|+|-+
T Consensus 248 ~GDlviwDNr~vlH~r~~~~~~~~R~l~R 276 (293)
T 3eat_X 248 SDDLVIADNLTLLHGREAFAHRAPRHLRR 276 (293)
T ss_dssp TTCEEEEETTTEEEEECCBSSCCCEEEEE
T ss_pred CCCEEEEeCCceEEcccCCCCCCceEEEE
Confidence 999999999999999999964 4454443
No 4
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=99.97 E-value=4.8e-32 Score=239.73 Aligned_cols=196 Identities=15% Similarity=0.153 Sum_probs=139.5
Q ss_pred EEeecCCCCCCcchhHHHHHhhhcccc---------Ccchh---h----hccccC-CccccccccccCCCCceEEEeeee
Q 024481 14 LLATRSCPTSAVLLPEATLLVEFLLPM---------NLHLI---V----TFLFTR-KWLWLERYMLLPQFPSKLFFFCEV 76 (267)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~---~----~~~~t~-~~lwHtD~~y~~~~P~~~~l~c~~ 76 (267)
++-++|.|.+...+.+++.++|.+..- ..+.+ . +.+|+. ...||+|.+|.+.||++++|+|++
T Consensus 41 ~v~~rg~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~HtD~sy~~~pp~~~~L~c~~ 120 (273)
T 1nx8_A 41 FVVVKNLDIDSDTFRDIYSAYGTIVEYADEKIGVGFGYRDTLKLEGEKGKIVTGRGQLPFHADGGLLLSQVDQVFLYAAE 120 (273)
T ss_dssp EEEECSCCCCHHHHHHHHHTTSEECCC-----------CCSEEECCCTTCSTTSSSCEEEECTTTTTTCCCCEEEEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCccccccccccCCCCCCceEEecCCCCCccccccCCCCcCCCCCccCCCeeEEEEeEe
Confidence 567899998888888999999988751 11221 1 122233 345899999999999999999999
Q ss_pred cCC--CCCCCcceeHHHHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCCCCCCCccccccccCHHHHHHHHHhcCCc
Q 024481 77 EPV--SGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLK 154 (267)
Q Consensus 77 ~p~--~GGeT~~aD~~~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~e~~~~~~g~~ 154 (267)
+|+ +||+|.|||+++||+.|+ ++.++.|+.+...|... . .+|+..++.
T Consensus 121 ~p~~~~GG~T~~~d~~~a~~~L~---~~~~~~l~~l~~~~~~~--~---------~~~~~~~~~---------------- 170 (273)
T 1nx8_A 121 IKNVKFRGATTVCDHALACQEMP---AHLLRVLEEETFEVRVL--E---------RGYYVDVSP---------------- 170 (273)
T ss_dssp EESCSSSSCEEEEEHHHHHHHSC---HHHHHHHHHSCEEEEEC-------------------------------------
T ss_pred CCCCCCCCcchhhhHHHHHHhCC---HHHHHHHhhcEEEEech--h---------cccccCCCc----------------
Confidence 999 999999999999999999 55666677666555311 0 011111100
Q ss_pred eEEccCCceEEEEeeeCeeEecCCCCceEEee-------cc-chhccccccCCCCCCcccccCCCCCCcHHHHHHHHHHh
Q 024481 155 LEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFN-------SI-VMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKIL 226 (267)
Q Consensus 155 ~~w~~dg~~~~~~~~~P~v~~hP~TG~~~lfn-------~~-~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~~~~ 226 (267)
+ ....+|+ ++||+||+++||+ +. ....+ .|...+.++++|+.|.+.+
T Consensus 171 -----~-----~~~~~Pv-~~hp~tG~~~l~~~r~~~~~~~~~~~~i--------------~~~~~~e~~~~l~~l~~~~ 225 (273)
T 1nx8_A 171 -----D-----GWFKVPV-FTDLGWVRKMLIYFPFDEGQPASWEPRI--------------VGFTDHETQAFFQELGAFL 225 (273)
T ss_dssp ------------CEECCS-EEECSSCEEECCBCCCCTTSCCSEEEEE--------------TTCCHHHHHHHHHHHHHHH
T ss_pred -----c-----cccCCCC-ccCCCCCceeEEeeeeccccCccccccC--------------CCCCHHHHHHHHHHHHHHh
Confidence 0 1136899 9999999999876 43 22222 1222245577888888877
Q ss_pred --hccEEEeeccCCCEEEEeCcccccccCCCCC--cceeeec
Q 024481 227 --EEECVAIPWQNGDVLLIDNLAVLHARRSSSR--PRHILAS 264 (267)
Q Consensus 227 --~~~~~~~~Wq~GDvli~DN~rvlHgR~~f~g--~R~ll~~ 264 (267)
++++++|+|++||||||||+++||||++|++ .+|+|.+
T Consensus 226 ~~~~~~~~~~w~~GD~~i~DN~~vlH~R~~f~~~~~~R~l~R 267 (273)
T 1nx8_A 226 KQPRYYYKHFWEDGDLLIMDNRRVIHEREEFNDDDIVRRLYR 267 (273)
T ss_dssp TSTTTEEEECCCTTCEEEEETTTEEEEECCCCCTTCEEEEEE
T ss_pred cCCceEEEeEecCCCEEEEECCeeeeccccCCCCCCCeEEEE
Confidence 7899999999999999999999999999975 4555543
No 5
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=99.97 E-value=7.9e-32 Score=241.95 Aligned_cols=208 Identities=13% Similarity=0.127 Sum_probs=136.8
Q ss_pred EEeecCC-CCCCcchhHHHHHhhhccccCc----------ch-hhhccccCCccccccccccCCCCceEEEeeeecCCCC
Q 024481 14 LLATRSC-PTSAVLLPEATLLVEFLLPMNL----------HL-IVTFLFTRKWLWLERYMLLPQFPSKLFFFCEVEPVSG 81 (267)
Q Consensus 14 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~t~~~lwHtD~~y~~~~P~~~~l~c~~~p~~G 81 (267)
++-++|. +.+.....+++.++|.+...+. +. ...+.++....||+|++|.+.||.+++|+|+++|+.|
T Consensus 48 vv~fR~q~~l~~~~~~~fa~~fG~l~~hp~~~~~~~~~~pei~~i~~~~~~~~~wH~D~s~~~~pp~~~~l~~~~~p~~G 127 (301)
T 3r1j_A 48 VIFFRHQHHLDDSRQLEFARLLGTPIGHPAASALAAKHLPVITPIDSEYGKATRWHTDVTFAANYPAASILRAVTLPSYG 127 (301)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHSCBBC------------------------CCSCBCTTTTSSSCCSEEEEEEEECCSSC
T ss_pred EEEECCCCCCCHHHHHHHHHhcCCccccccccCCCCCCCCcEEEEeCCCCCCCCCccccCCccCCCceeEEEEeecCCCC
Confidence 5667888 8788888899999999864332 11 1122344456799999999999999999999999999
Q ss_pred CCCcceeHHHHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCCCCCCCccccccccCHHHHHHHHHhcCCceEEccCC
Q 024481 82 GDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDG 161 (267)
Q Consensus 82 GeT~~aD~~~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~e~~~~~~g~~~~w~~dg 161 (267)
|+|.|||+++||+.|+ +++++.|+.+.+.+....... +.. ...... +.. +. ++....
T Consensus 128 G~T~fad~~~ay~~L~---~~~~~~~~~l~a~h~~~~~~~----------~~~-~~~~~~---~~~----~~--~~~~~~ 184 (301)
T 3r1j_A 128 GSTLWASTVAAYQQLP---EPLRHLTENLWALHTNRYDYV----------RND-PMNDTQ---RAF----RQ--AFEKPD 184 (301)
T ss_dssp CCEEEEEHHHHHHTCC---HHHHHHHTTCEEEEECC------------------------------------------CC
T ss_pred CCCeeEcHHHHHHhCC---HHHHHHHhcCEEEEcchhhhh----------hhc-cccccc---hhh----cc--cccccC
Confidence 9999999999999999 788888886655554111000 000 000000 000 00 000010
Q ss_pred ceEEEEeeeCeeEecCCCCceEEeeccchhccccccCCCCCCcccccCCCCCCcHHHHHHHHHHh--hccEEEeeccCCC
Q 024481 162 GVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQNGD 239 (267)
Q Consensus 162 ~~~~~~~~~P~v~~hP~TG~~~lfn~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~~~~--~~~~~~~~Wq~GD 239 (267)
....||+|++||+||++++|.+.+...+. |...+.++++|+.|.+.+ ++++|+|+|++||
T Consensus 185 ----~~~~hPvVr~hP~TG~k~L~v~~~~~~i~--------------gl~~~Es~~lL~~L~~~~~~pe~~~r~~W~~GD 246 (301)
T 3r1j_A 185 ----FRTEHPVVRVHPETGERALLAGDFVRGFV--------------GLDGHESSVLLELLQRRITMPENTVRWSWAPGD 246 (301)
T ss_dssp ----CEEEEESEEECTTTCCEEECCSTTEEEET--------------TSCHHHHHHHHHHHHHHHTCGGGEEEECCCTTC
T ss_pred ----CccccceEEECCCCCCeEEEecccccccc--------------CCCHHHHHHHHHHHHHHhcCCCeEEEeeeCCCC
Confidence 23479999999999999987633333332 222344567777776643 6899999999999
Q ss_pred EEEEeCcccccccCCC-CCcceee
Q 024481 240 VLLIDNLAVLHARRSS-SRPRHIL 262 (267)
Q Consensus 240 vli~DN~rvlHgR~~f-~g~R~ll 262 (267)
||||||+++||+|..+ .+.+|++
T Consensus 247 lviwDNr~~lH~a~~d~~~~~R~~ 270 (301)
T 3r1j_A 247 VAMWDNRATQHRAIDDYDDQPRLM 270 (301)
T ss_dssp EEEEETTSEEEEECCCSTTCCCEE
T ss_pred EEEEEcCceeecccCCCCCCCeEE
Confidence 9999999999999864 3434444
No 6
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=99.97 E-value=3.4e-32 Score=241.98 Aligned_cols=210 Identities=15% Similarity=0.063 Sum_probs=141.8
Q ss_pred eEEeecCCCCCCcchhHHHHHhhhcccc-Ccch------h--hhcccc---CCccccccccccCCCCceEEEeeeecCCC
Q 024481 13 RLLATRSCPTSAVLLPEATLLVEFLLPM-NLHL------I--VTFLFT---RKWLWLERYMLLPQFPSKLFFFCEVEPVS 80 (267)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~--~~~~~t---~~~lwHtD~~y~~~~P~~~~l~c~~~p~~ 80 (267)
-++-++|.|.+...+.+++.++|.+... ..+. + .++... ....||+|++|.+.||.+++|+|+++|++
T Consensus 43 Gvv~frg~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~i~~v~~~~~~~~~~~~wHtD~sy~~~pp~~~~L~c~~~p~~ 122 (283)
T 1otj_A 43 QVVFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPST 122 (283)
T ss_dssp SEEEECSCCCCHHHHHHHHHTTSCBCCCSSSCEETTEEEEEEEEEBTTBCCCCCSCBCTTTTSSSCEEEEEEEEEECCSS
T ss_pred CEEEECCCCCCHHHHHHHHHHhCCCCcCCCCCCCCCCCeEEEEeCCCCCCCcCCCcEeeccCccCCCceEEEEEEecCCC
Confidence 3567899998888888999999998753 2221 1 111111 12369999999999999999999999999
Q ss_pred CCCCcceeHHHHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCCCCCCCccccccccCHHHHHHHHHhcCCceEEccC
Q 024481 81 GGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMED 160 (267)
Q Consensus 81 GGeT~~aD~~~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~e~~~~~~g~~~~w~~d 160 (267)
||+|.|||+++||+.|+ ++.++.|+.+...|...+. ..|+..++.+. ..+...... +
T Consensus 123 GG~T~~~d~~~ay~~L~---~~~~~~~~~l~~~~~~~~~----------~~~~~~~g~~~--~~~~~~~~~--------~ 179 (283)
T 1otj_A 123 GGDTLWTSGIAAYEALS---VPFRQLLSGLRAEHDFRKS----------FPEYKYRKTEE--EHQRWREAV--------A 179 (283)
T ss_dssp CCCEEEEEHHHHHHTSC---HHHHHHHTTCEEEECHHHH----------SCGGGSCSSHH--HHHHHHHHH--------H
T ss_pred CCcceeeeHHHHHHhCC---HHHHHHHhCcEEEEcchhh----------cchhhcccCcc--ccccccccc--------c
Confidence 99999999999999999 6677777765555532111 11222222210 111111100 0
Q ss_pred CceEEEEeeeCeeEecCCCCceEE-eeccchhccccccCCCCCCcccccCCCCCCcHHHHHHHHHHh--hccEEEeeccC
Q 024481 161 GGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQN 237 (267)
Q Consensus 161 g~~~~~~~~~P~v~~hP~TG~~~l-fn~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~~~~--~~~~~~~~Wq~ 237 (267)
.. ....||+|++||.||++++ ||.....++.+ ...+.++++++.|.+.+ ++++++|+|++
T Consensus 180 ~~---~~~~~Pvv~~hp~tG~~~l~~n~~~~~~i~g--------------~~~~e~~~ll~~l~~~~~~~~~~~~~~w~~ 242 (283)
T 1otj_A 180 KN---PPLLHPVVRTHPVSGKQALFVNEGFTTRIVD--------------VSEKESEALLSFLFAHITKPEFQVRWRWQP 242 (283)
T ss_dssp HC---CCEEEESEEECTTTCCEEECCCTTTEEEESS--------------SCHHHHHHHHHHHHHHTTCGGGEEEECCCT
T ss_pred cC---CCccCCeEEeCCCCCcEEEEecccccccCCC--------------CCHHHHHHHHHHHHHHHhCCCcEEEeeEcC
Confidence 00 2347999999999999985 45443333321 11233456667666543 67899999999
Q ss_pred CCEEEEeCcccccccCCCC-Ccceee
Q 024481 238 GDVLLIDNLAVLHARRSSS-RPRHIL 262 (267)
Q Consensus 238 GDvli~DN~rvlHgR~~f~-g~R~ll 262 (267)
||||||||+++||||++|. +.+|+|
T Consensus 243 GDv~i~DN~~~lH~r~~f~~~~~R~l 268 (283)
T 1otj_A 243 NDIAIWDNRVTQHYANADYLPQRRIM 268 (283)
T ss_dssp TCEEEEETTSEEEEECCCCTTSCEEE
T ss_pred CCEEEEECcceeecccCCCCCCceEE
Confidence 9999999999999999995 334444
No 7
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=99.97 E-value=6.7e-31 Score=243.67 Aligned_cols=196 Identities=19% Similarity=0.232 Sum_probs=147.0
Q ss_pred EEeecCCCCCCcchhHHHHHhhhccccCcchh---------hhccccCCc-cccccccccCCCCceEEEeeeecCCCCCC
Q 024481 14 LLATRSCPTSAVLLPEATLLVEFLLPMNLHLI---------VTFLFTRKW-LWLERYMLLPQFPSKLFFFCEVEPVSGGD 83 (267)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~t~~~-lwHtD~~y~~~~P~~~~l~c~~~p~~GGe 83 (267)
++-++|.|.+...+..++.++|++++++++.+ .+.+||+.. .||+|++|.+.||++++|+|+++|++||+
T Consensus 150 vv~frg~~~~~~~~~~~a~~~G~l~~~~~g~~~~v~~~~~~~~~~yt~~~l~~HtD~sy~~~pp~~~~L~c~~~~~~GG~ 229 (388)
T 3o2g_A 150 IVRLTGASDKPGEVSKLGKRMGFLYLTFYGHTWQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGD 229 (388)
T ss_dssp EEEEECCCSSTTHHHHHHHHHSCCCCBTTBSSEEESCCTTCSSGGGSSSCEEEECSCTTSSSCCSEEEEEEEECCSSSCC
T ss_pred EEEEeCCCCCHHHHHHHHHHhCCCccccCCCceEEeecCCcCcccCccCCcccccCCCccCCCCcEEEEEEEecCCCCCc
Confidence 67789999999999999999999998877654 234677654 48999999999999999999999999999
Q ss_pred CcceeHHHHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCCCCCCCccccccccCHHHHHHHHHhcCCceEEccCCce
Q 024481 84 TPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGV 163 (267)
Q Consensus 84 T~~aD~~~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~~e~~~~~~g~~~~w~~dg~~ 163 (267)
|.|+|+++||+.|+++.|+.++.|.+..+.|...... +. .
T Consensus 230 T~~~d~~~a~~~L~~~~p~~~~~L~~~~~~~~~~~~~---------------------------------------~~-~ 269 (388)
T 3o2g_A 230 SEIVDGFNVCQKLKKNNPQAFQILSSTFVDFTDIGVD---------------------------------------YC-D 269 (388)
T ss_dssp EEEEEHHHHHHHHHHHCHHHHHHHTTCEEEEEEEEES---------------------------------------SS-E
T ss_pred CeeecHHHHHHHhhhhCHHHHHHHhcCCcccEEecCC---------------------------------------CC-C
Confidence 9999999999999999999999999876665422100 00 0
Q ss_pred EEEEeeeCeeEecCCCCc-eEE-eeccchhccccccCCCCCCcccccCCCCCCcH---HHHHHHHHHhh--ccEEEeecc
Q 024481 164 KTVLGPIPAVTYDKIRQR-KIW-FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPE---DIVYNLMKILE--EECVAIPWQ 236 (267)
Q Consensus 164 ~~~~~~~P~v~~hP~TG~-~~l-fn~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~---~~l~~l~~~~~--~~~~~~~Wq 236 (267)
......||+|++||. |+ +.+ ||......+ .+-..+... ++|+.|.+.+. +++++|+|+
T Consensus 270 ~~~~~~~Pvv~~hp~-g~~~~l~~~~~~~~~i--------------~~l~~~~~~~~~~al~~l~~~~~~p~~~~~~~~~ 334 (388)
T 3o2g_A 270 FSVQSKHKIIELDDK-GQVVRINFNNATRDTI--------------FDVPVERVQPFYAALKEFVDLMNSKESKFTFKMN 334 (388)
T ss_dssp EEEEEEEESEEECTT-SCEEEECCCTTTBCSC--------------CCSCHHHHHHHHHHHHHHHHHHHSTTTCEEECCC
T ss_pred cceeeccCEEEEcCC-CCEEEEEeCccccccc--------------CCCCHHHHHHHHHHHHHHHHHhcChhhEEEEEcC
Confidence 113458999999996 66 333 343211111 110001111 45666666554 789999999
Q ss_pred CCCEEEEeCcccccccCCCC---C-cceeeec
Q 024481 237 NGDVLLIDNLAVLHARRSSS---R-PRHILAS 264 (267)
Q Consensus 237 ~GDvli~DN~rvlHgR~~f~---g-~R~ll~~ 264 (267)
|||||||||+++||||++|+ | .|++..+
T Consensus 335 pGd~vi~DNr~~lH~R~~f~~~~~~~R~L~r~ 366 (388)
T 3o2g_A 335 PGDVITFDNWRLLHGRRSYEAGTEISRHLEGA 366 (388)
T ss_dssp TTCEEEEETTTEEEEECCCCCCSSCSCEEEEE
T ss_pred CCcEEEEeCcEEeeCCCCcCCCCCCCEEEEEE
Confidence 99999999999999999997 4 5666554
No 8
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=99.97 E-value=5e-31 Score=234.23 Aligned_cols=208 Identities=16% Similarity=0.137 Sum_probs=139.6
Q ss_pred EEeecCCCCCCcchhHHHHHhhhccccCcc-------hh--hhccc---cCCccccccccccCCCCceEEEeeeecCCCC
Q 024481 14 LLATRSCPTSAVLLPEATLLVEFLLPMNLH-------LI--VTFLF---TRKWLWLERYMLLPQFPSKLFFFCEVEPVSG 81 (267)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~---t~~~lwHtD~~y~~~~P~~~~l~c~~~p~~G 81 (267)
++-++|.+.+.....+++.++|.+...... .+ .++.. .....||+|++|.+.||.+++|+|+++|+.|
T Consensus 42 vv~fR~q~l~~~~~~~fa~~fG~l~~~p~~~~~~~~~~i~~i~~~~~~~~~~~~wH~D~sy~~~pp~~~~l~~~~~p~~G 121 (277)
T 3pvj_A 42 VLFLRDQPINPEQQARFAARFGDLHIHPIYPNVPDTPQVLVLDTAVTDVRDNAVWHTDVTFLPTPALGAVLSAKQLPAYG 121 (277)
T ss_dssp EEEESSCCCCHHHHHHHHGGGSCEECCSSSCEETTEEEEEEEETTTSCCGGGSSCBCTTTTSSSCCCEEEEEEEECCSSC
T ss_pred EEEECCCCCCHHHHHHHHHHhCCCcccCccCCCCCCCeEEEEecCCCCCCcCCCceeeCCCcCCCCceEEEEeeccCCCC
Confidence 566889988888888999999998743211 11 11111 1234699999999999999999999999999
Q ss_pred CCCcceeHHHHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCCCCCCCccc-cccccCHHHHHHHHHhcCCceEEccC
Q 024481 82 GDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWKS-IFLTEDKSLAEERAANLGLKLEWMED 160 (267)
Q Consensus 82 GeT~~aD~~~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~~-~f~~~d~~~~e~~~~~~g~~~~w~~d 160 (267)
|+|.|||+++||+.|+ +++++.|+.+ ...+.... .+.. .+. ...+..+....... ..
T Consensus 122 G~T~~~d~~~ay~~L~---~~~~~~~~~l--~a~h~~~~----------~~~~~~~~-~~~~~~~~~~~~~~------~~ 179 (277)
T 3pvj_A 122 GDTLWASGIAAFEALS---APLREMLDGL--TATHDFTK----------SFPLERFG-TTPQDLARWEATRR------NN 179 (277)
T ss_dssp CCEEEEEHHHHHHHSC---HHHHHHHTTC--EEEECGGG----------TSCGGGTC-SSHHHHHHHHHHHH------HS
T ss_pred CCcEeeeHHHHHHhCC---HHHHHHHhcc--EEEeCcHH----------Hhhhhhcc-CCchhccchhhhhc------cC
Confidence 9999999999999999 6788888854 33322211 0000 001 11111110000000 00
Q ss_pred CceEEEEeeeCeeEecCCCCceEEeec-cchhccccccCCCCCCcccccCCCCCCcHHHHHHHHHHh--hccEEEeeccC
Q 024481 161 GGVKTVLGPIPAVTYDKIRQRKIWFNS-IVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNLMKIL--EEECVAIPWQN 237 (267)
Q Consensus 161 g~~~~~~~~~P~v~~hP~TG~~~lfn~-~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l~~~~--~~~~~~~~Wq~ 237 (267)
....||+|++||+||++++|.+ .....+. |-..+.++++|+.|.+.+ ++++|+|+|++
T Consensus 180 -----~~~~hPvVr~hP~TG~k~L~vn~~~~~~i~--------------gl~~~es~~ll~~L~~~~~~pe~~~r~~W~~ 240 (277)
T 3pvj_A 180 -----PPLSHPVVRTHPVSGRKALFVNEGFTTRIN--------------ELSELESDALLRLLFAHATRPEFSIRWRWQE 240 (277)
T ss_dssp -----CCEEEESEEECTTTCCEEECCCTTTEEEET--------------TSCHHHHHHHHHHHHHHHTSGGGEEEECCCT
T ss_pred -----CCCcCCeEEecCCCCCEEEEeccccceeec--------------CCCHHHHHHHHHHHHHHHhCCCcEEEEeeCC
Confidence 1247999999999999987744 3333432 222244566777776643 67999999999
Q ss_pred CCEEEEeCcccccccCCCCC-cceee
Q 024481 238 GDVLLIDNLAVLHARRSSSR-PRHIL 262 (267)
Q Consensus 238 GDvli~DN~rvlHgR~~f~g-~R~ll 262 (267)
|||+||||+++||+|.++.+ .+|++
T Consensus 241 GDlviwDNr~~lH~a~~d~~~~~R~~ 266 (277)
T 3pvj_A 241 NDVAFWDNRVTQHFAVDDYRPNRRVM 266 (277)
T ss_dssp TCEEEEETTSEEEEECCCCTTSCCEE
T ss_pred CCEEEEeCCceeeeccCCCCCCccEE
Confidence 99999999999999998643 34444
No 9
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=99.93 E-value=3.6e-26 Score=209.70 Aligned_cols=141 Identities=12% Similarity=0.151 Sum_probs=105.4
Q ss_pred ccccccccccCCCCceEEEeeeecCCCCCCCcceeHH-HHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCCCCCCCc
Q 024481 54 WLWLERYMLLPQFPSKLFFFCEVEPVSGGDTPLVLSH-IVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGW 132 (267)
Q Consensus 54 ~lwHtD~~y~~~~P~~~~l~c~~~p~~GGeT~~aD~~-~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w 132 (267)
..||+|.+|.+.||++++|+|+++|.+||+|+|+|+. ++|+.|+ |++++.|++.. |.....
T Consensus 176 l~~HtD~sy~~~pP~~~~L~cl~~~~~GG~t~~~~~~~~al~~l~---p~~~~~L~~~~--~~~~~~------------- 237 (357)
T 2og5_A 176 LTFHNENAFHEHRPDFVMLLCLRADPTGRAGLRTACVRRVLPLLS---DSTVDALWAPE--FRTAPP------------- 237 (357)
T ss_dssp EEEECTTTTCTTCCSEEEEEEEECCTTSCCCEEEEEHHHHGGGSC---HHHHHHHTSSC--EECCCC-------------
T ss_pred ccccccCCCCCCCCCeEEEEEEccCCCCCccEEEeeHHHHHHhCC---HHHHHHHcCCC--eEecCC-------------
Confidence 3489999999999999999999999999999999975 5666665 99999999644 321110
Q ss_pred cccccccCHHHHHHHHHhcCCceEEccCCceEEEEeeeCeeEecCCCCceEEeeccchhccccccCCCCCCcccccCCCC
Q 024481 133 KSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGS 212 (267)
Q Consensus 133 ~~~f~~~d~~~~e~~~~~~g~~~~w~~dg~~~~~~~~~P~v~~hP~TG~~~lfn~~~~~~~~~~~~~~~~~~~~~~gdg~ 212 (267)
..|+... . ....||+|+.||. |+.++||..... ..+
T Consensus 238 -~~~~~~~------------------~------~~~~~pvv~~~~~-g~~l~~~~~~~~------------------~~~ 273 (357)
T 2og5_A 238 -PSFQLSG------------------P------EEAPAPVLLGDRS-DPDLRVDLAATE------------------PVT 273 (357)
T ss_dssp -GGGC------------------------------CCBCSEEECSS-SEEECCBTTTCE------------------ESS
T ss_pred -ccccccc------------------C------CCCcceEEEeCCC-CCeEEEchhhcC------------------CCC
Confidence 1111000 0 1136899999998 855566642110 123
Q ss_pred CCcHHHHHHHHHHhhccEEEeeccCCCEEEEeCcccccccCCCC
Q 024481 213 PYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSS 256 (267)
Q Consensus 213 ~~~~~~l~~l~~~~~~~~~~~~Wq~GDvli~DN~rvlHgR~~f~ 256 (267)
+.+.++|+.|.+.+.+.+++|+|++||||||||+++||||++|+
T Consensus 274 ~e~~~aL~~l~~~~~~~~~~~~w~pGDivi~DN~~vlH~R~~f~ 317 (357)
T 2og5_A 274 ERAAEALRELQAHFDATAVTHRLLPGELAIVDNRVTVHGRTEFT 317 (357)
T ss_dssp HHHHHHHHHHHHHHHHHCEEECCCTTCEEEEETTTEEEEECCCC
T ss_pred HHHHHHHHHHHHHHhhceEEEeeCCCCEEEEeCCccccCCCCCC
Confidence 46678889998888777999999999999999999999999995
No 10
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=99.92 E-value=2.6e-25 Score=201.36 Aligned_cols=156 Identities=14% Similarity=0.094 Sum_probs=112.0
Q ss_pred cccCCc-cccccccccCCCCceEEEeeeecCCC-CCCCcceeHHHHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCC
Q 024481 49 LFTRKW-LWLERYMLLPQFPSKLFFFCEVEPVS-GGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTS 126 (267)
Q Consensus 49 ~~t~~~-lwHtD~~y~~~~P~~~~l~c~~~p~~-GGeT~~aD~~~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~ 126 (267)
+||+.. .||+|.+|.+.||++++|+|+++|.+ ||+|.|+|+++||+.|+ |++++.|.+. .+...+
T Consensus 135 ~~t~~~l~~HtD~sy~~~pP~~~~L~c~~~~~~GGg~T~~~~~~~a~~~L~---~~~~~~l~~~--~~~~~~-------- 201 (324)
T 1ds1_A 135 ETSETLLEFHTEMAYHRLQPNYVMLACSRADHERTAATLVASVRKALPLLD---ERTRARLLDR--RMPCCV-------- 201 (324)
T ss_dssp TCCSSCEEEECTTTTBTTCCSEEEEEEEECCTTCCCCEEEEEHHHHGGGSC---HHHHHHHBTC--CEEECC--------
T ss_pred ccccCcccccccCCCCCCCCCeEEEEEeecCccCCceEEEeeHHHHHHhCC---HHHHHHHhcc--CccccC--------
Confidence 455544 48999999999999999999999998 89999999999999998 7788888743 222111
Q ss_pred CCCCCccccccccCHHHHHHHHHhcCCceEEccCCceEEEEeeeCeeEecCCCCceEE-eeccchhccccccCCCCCCcc
Q 024481 127 PTGRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKDTQNDPVKA 205 (267)
Q Consensus 127 ~~~~~w~~~f~~~d~~~~e~~~~~~g~~~~w~~dg~~~~~~~~~P~v~~hP~TG~~~l-fn~~~~~~~~~~~~~~~~~~~ 205 (267)
...|... . .. ....||+|+.+...+.+.+ ||... .
T Consensus 202 ------~~~~~~~---------------------~-~~-~~~~hPvv~~~g~~~~~~~~~~~~~---~------------ 237 (324)
T 1ds1_A 202 ------DVAFRGG---------------------V-DD-PGAIAQVKPLYGDADDPFLGYDREL---L------------ 237 (324)
T ss_dssp ------CGGGCCC---------------------C-CS-GGGSEEECSEESCTTSCEECCBTTT---B------------
T ss_pred ------ChhhccC---------------------C-cC-ccccCCeEEEeCCCCCceEEECCcc---C------------
Confidence 1111100 0 00 1236788776666554443 33210 0
Q ss_pred cccCCCCCCcHHHHHHHHHHhhccEEEeeccCCCEEEEeCcccccccCCCCC-----cceeeec
Q 024481 206 VTFGNGSPYPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSR-----PRHILAS 264 (267)
Q Consensus 206 ~~~gdg~~~~~~~l~~l~~~~~~~~~~~~Wq~GDvli~DN~rvlHgR~~f~g-----~R~ll~~ 264 (267)
...++.+.++|+.|.+++.+++++|+|++||||||||+++||||++|++ .|++..+
T Consensus 238 ---~~~~~~~~~al~~l~~~~~~~~~~~~w~~GDv~i~DN~~~lH~R~~f~~~~~~~~R~L~R~ 298 (324)
T 1ds1_A 238 ---APEDPADKEAVAALSKALDEVTEAVYLEPGDLLIVDNFRTTHARTPFSPRWDGKDRWLHRV 298 (324)
T ss_dssp ---CCCSHHHHHHHHHHHHHHHHTCEEECCCTTCEEEEETTTEEEEECCCCCCCSSCCCEEEEE
T ss_pred ---CCCCHHHHHHHHHHHHHHHhccEEEeeCCCCEEEEeCCceeecCCccCCCCCCCCcEEEEE
Confidence 0123567889999998888999999999999999999999999999976 4655543
No 11
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=99.90 E-value=1.5e-24 Score=198.84 Aligned_cols=158 Identities=15% Similarity=0.120 Sum_probs=105.8
Q ss_pred ccccccccccCCCCceEEEeeeecCCCCCCCcceeHHHHHHHhhhhChHHHHHHHhCCeEEEEEeccCCCCCCCCCCCcc
Q 024481 54 WLWLERYMLLPQFPSKLFFFCEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQLEQDGLIYTRIYQEKDDLTSPTGRGWK 133 (267)
Q Consensus 54 ~lwHtD~~y~~~~P~~~~l~c~~~p~~GGeT~~aD~~~~y~~L~~~~Pel~~~L~~~~v~~~~~~~~~~~~~~~~~~~w~ 133 (267)
..||||.+|.+.||++++|+|+++|+ ||+|.|||++.+ .|+ |++++.|++.. |...... . ...|.
T Consensus 165 l~~HtD~sy~~~pp~~~~L~cl~~p~-gG~T~~ad~~~~--~l~---p~~~~~L~~~~--~~~~~~~-~------~~~~~ 229 (358)
T 2wbq_A 165 LGWHTEDAFSPYRADYVGLLSLRNPD-GVATTLAGVPLD--DLD---ERTLDVLFQER--FLIRPDD-S------HLQVN 229 (358)
T ss_dssp EEEECTTTTCTTCCSEEEEEEEECTT-CCEEEEEECCTT--TCC---HHHHHHHTSSC--EECCCCG-G------GSGGG
T ss_pred ccccccCCCCCCCCCeEEEEeEecCC-CCCceEEechhh--hCC---HHHHHHHhCCC--eEEcCCc-c------ccccc
Confidence 35899999999999999999999999 999999998754 454 99999999654 3211111 0 00111
Q ss_pred ccccccCHHHHHHHHHhcCCceEEccCCceEEEEeeeCeeEecCCCCceEEeeccchhccccccCCCCCCcccccCCCCC
Q 024481 134 SIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSP 213 (267)
Q Consensus 134 ~~f~~~d~~~~e~~~~~~g~~~~w~~dg~~~~~~~~~P~v~~hP~TG~~~lfn~~~~~~~~~~~~~~~~~~~~~~gdg~~ 213 (267)
..++..+..+.+.. .+|.+++ ..||+++.|| |++.++.+.....+ .+.++
T Consensus 230 ~~~~~~~~~~~~~~-------~~~~~~~------~~hpvv~~~~--~~~~l~~~~~~~~~---------------~~~~~ 279 (358)
T 2wbq_A 230 NSTAQQGRVEFEGI-------AQAADRP------EPVAILTGHR--AAPHLRVDGDFSAP---------------AEGDE 279 (358)
T ss_dssp CC-----CTHHHHH-------HHHHHSC------CCBCSEEEET--TEEEECCBTTTCEE---------------STTCH
T ss_pred ccccccchhhhhhh-------hhhccCC------CcceeeeCCC--CCCcEEECcccccc---------------CCCCH
Confidence 11111111111100 0122222 2689999988 77765422111111 12236
Q ss_pred CcHHHHHHHHHHhhccEEEeeccCCCEEEEeCcccccccCCCC
Q 024481 214 YPEDIVYNLMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSS 256 (267)
Q Consensus 214 ~~~~~l~~l~~~~~~~~~~~~Wq~GDvli~DN~rvlHgR~~f~ 256 (267)
.+.++|+.|.+.+.+++++|+|++||||||||+++||||.+|+
T Consensus 280 e~~~aL~~l~~~~~~~~~~~~w~pGDv~i~DNr~vlH~R~~f~ 322 (358)
T 2wbq_A 280 EAAAALGTLRKLIDASLYELVLDQGDVAFIDNRRAVHGRRAFQ 322 (358)
T ss_dssp HHHHHHHHHHHHHHHHCEEEECCTTCEEEEETTTEEEEECCCC
T ss_pred HHHHHHHHHHHHHHhhceEEeecCCCEEEEeCcccccCCCCCC
Confidence 6788999999888889999999999999999999999999995
No 12
>1jr7_A GABT protein, hypothetical 37.4 kDa protein in ILEY-GABD interg region; gamma amino-butyric acid metabolism, GABA; 2.00A {Escherichia coli} SCOP: b.82.2.3 PDB: 2r6s_A*
Probab=99.90 E-value=7.6e-24 Score=188.66 Aligned_cols=177 Identities=15% Similarity=0.141 Sum_probs=127.8
Q ss_pred EEeecCCC----CCCcchhHHHHHhhhc-cccC----cchh------------hhc---cccCCccccccccccCCCCce
Q 024481 14 LLATRSCP----TSAVLLPEATLLVEFL-LPMN----LHLI------------VTF---LFTRKWLWLERYMLLPQFPSK 69 (267)
Q Consensus 14 ~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~----~~~~------------~~~---~~t~~~lwHtD~~y~~~~P~~ 69 (267)
+.++...| .+...+..++.++|++ ++++ +|.+ .+. +|| ..-||||.+|.+.+|++
T Consensus 80 ~~~i~~~~~~~~~~~~~~~~l~~riG~i~r~t~~D~~yG~~~a~f~V~~~~~~~~~l~~AYT-~L~lHTDg~Y~~~~pg~ 158 (311)
T 1jr7_A 80 ALLINAVGVDDVKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHR-VMELHNDGTYVEEITDY 158 (311)
T ss_dssp EEEEEETTCCSGGGHHHHHHHHHHHHHHHEEECCBTTTTBSSEEEEECCC-----CTTCTTC-CEEEECSCTTSSSCCCE
T ss_pred EEEEEccCCCCCCCHHHHHHHHHHheeccccCCcccCCCceEeeEEEEecCCccccchhhcc-CCCcccCCCCCCCCccH
Confidence 44555555 4777788899999999 9998 5533 235 788 44569999999999999
Q ss_pred EEEe-eeecCCCCCCCcceeHHHHHHHhhhhChHHHHH-----HHhCCeEEEEEeccCCCCCCCCCCCccccccccCHHH
Q 024481 70 LFFF-CEVEPVSGGDTPLVLSHIVYERMKESYPEFVQQ-----LEQDGLIYTRIYQEKDDLTSPTGRGWKSIFLTEDKSL 143 (267)
Q Consensus 70 ~~l~-c~~~p~~GGeT~~aD~~~~y~~L~~~~Pel~~~-----L~~~~v~~~~~~~~~~~~~~~~~~~w~~~f~~~d~~~ 143 (267)
++|| |++++.+||+|.| |++++||.++. |++..|.|.. +.+.
T Consensus 159 qlLH~Cl~~~~~GGeS~l---------Lr~~dPe~f~~~~~~~L~~~~v~~~~--~~~~--------------------- 206 (311)
T 1jr7_A 159 VLMMKIDEQNMQGGNSLL---------LHLDDWEHLDNYFRHPLARRPMRFAA--PPSK--------------------- 206 (311)
T ss_dssp EEEEEEEEESCCBCCEEE---------EEGGGCTTHHHHHTSGGGGSCEEECC--SSCT---------------------
T ss_pred HHHHHHHhccCCCceeee---------chhhCHHHHhcccccCceeceEEeec--cCCC---------------------
Confidence 9999 9999999999999 99999999999 9987777741 1100
Q ss_pred HHHHHHhcCCceEEccCCceEEEEeeeCeeEecCCCCceEE-eeccchhccccccCCCCCCcccccCCCCCCcHHHHHHH
Q 024481 144 AEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIW-FNSIVMAYTCWKDTQNDPVKAVTFGNGSPYPEDIVYNL 222 (267)
Q Consensus 144 ~e~~~~~~g~~~~w~~dg~~~~~~~~~P~v~~hP~TG~~~l-fn~~~~~~~~~~~~~~~~~~~~~~gdg~~~~~~~l~~l 222 (267)
+ .. ....+|+|..++. |+..+ ||.... ..-..+....+..+
T Consensus 207 -----------------~-~~-~~~~~PVi~ld~~-G~l~IRyn~~~r------------------~p~~~~~~~Yl~~f 248 (311)
T 1jr7_A 207 -----------------N-VS-KDVFHPVFDVDQQ-GRPVMRYIDQFV------------------QPKDFEEGVWLSEL 248 (311)
T ss_dssp -----------------T-CC-CCEEECSEEECTT-SCEEECCCTTTE------------------ECCSHHHHHHHHHH
T ss_pred -----------------c-ee-eEeecCEEEECCC-CCEEEEeCCCCC------------------CCHHHHHHHHHHHH
Confidence 0 00 2336799999886 87642 332100 00011122235555
Q ss_pred HHHh--hccEEEeeccCCCEEEEeCcccccccCCCC---Cc-cee
Q 024481 223 MKIL--EEECVAIPWQNGDVLLIDNLAVLHARRSSS---RP-RHI 261 (267)
Q Consensus 223 ~~~~--~~~~~~~~Wq~GDvli~DN~rvlHgR~~f~---g~-R~l 261 (267)
.+.+ +++++.|+|++||+||+||+|+||||++|+ |. |++
T Consensus 249 ~~~l~dp~~~~~~kL~pGd~vifDN~RvLHGR~aF~~~~g~~R~L 293 (311)
T 1jr7_A 249 SDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRREL 293 (311)
T ss_dssp HHHHHTCTTCEEECCCTTCEEEEETTTEEEEECCBCCCTTCEEEE
T ss_pred HHHhcCcccEEEEEcCCCcEEEEeCCccccCcCCcCCCCCCceEE
Confidence 5533 568999999999999999999999999996 54 777
No 13
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=85.23 E-value=1.1 Score=39.46 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=26.0
Q ss_pred HhhccEEEeeccCCCEEEEeCcccccccCCC
Q 024481 225 ILEEECVAIPWQNGDVLLIDNLAVLHARRSS 255 (267)
Q Consensus 225 ~~~~~~~~~~Wq~GDvli~DN~rvlHgR~~f 255 (267)
.++.+.+.+.++|||+|++| ..++||..+.
T Consensus 228 ~le~~~~ewd~epGDav~F~-~~tlHga~pl 257 (344)
T 3nnf_A 228 TIKDGYEEDEYNLGDAFFFN-KYVLHQSVPL 257 (344)
T ss_dssp HHTTCEEECCBCTTCEEEEE-TTCEEEECCB
T ss_pred hhhhhhccccCCCCcEEEEe-cceeecCCCC
Confidence 46788999999999999996 6799999865
No 14
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=77.78 E-value=1.6 Score=37.32 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=26.2
Q ss_pred cEEEeeccCCCEEEEeCcccccccCCCC-C-cceee
Q 024481 229 ECVAIPWQNGDVLLIDNLAVLHARRSSS-R-PRHIL 262 (267)
Q Consensus 229 ~~~~~~Wq~GDvli~DN~rvlHgR~~f~-g-~R~ll 262 (267)
..+.+..++||++|+|.+ ++||..+-. + .|+.+
T Consensus 226 ~~v~~~~~aGd~~~f~~~-~~H~s~~N~s~~~R~~~ 260 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGE-VVHKSKQNLSDRSRQAY 260 (291)
T ss_dssp GCEEECBCTTCEEEEETT-CEEEECCBCSSSCCCEE
T ss_pred CeeecccCCCcEEEEcCC-ceecCCCCCCCCceEEE
Confidence 468899999999999997 999987753 3 55543
No 15
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=69.79 E-value=3.2 Score=35.89 Aligned_cols=27 Identities=19% Similarity=0.358 Sum_probs=23.6
Q ss_pred cEEEeeccCCCEEEEeCcccccccCCCC
Q 024481 229 ECVAIPWQNGDVLLIDNLAVLHARRSSS 256 (267)
Q Consensus 229 ~~~~~~Wq~GDvli~DN~rvlHgR~~f~ 256 (267)
..+.+..++||++|+|.+ ++||..+-.
T Consensus 218 ~~v~~~~~aGd~v~f~~~-l~H~s~~N~ 244 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWST-LMHASYPHS 244 (313)
T ss_dssp GCEEECBCTTEEEEEETT-SEEEECCBC
T ss_pred ceeEeeeCCceEEEEeCC-ceeeCCCCC
Confidence 468899999999999995 999988765
No 16
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=69.41 E-value=3.3 Score=35.80 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=26.0
Q ss_pred cEEEeeccCCCEEEEeCcccccccCCC-CC-cceee
Q 024481 229 ECVAIPWQNGDVLLIDNLAVLHARRSS-SR-PRHIL 262 (267)
Q Consensus 229 ~~~~~~Wq~GDvli~DN~rvlHgR~~f-~g-~R~ll 262 (267)
..+....++||++|+|. +++||..+- ++ .|+.+
T Consensus 214 ~~v~~~~~aGd~vlf~~-~~~H~s~~N~s~~~R~~~ 248 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHP-LLIHGSGQNKTQGFRKAI 248 (308)
T ss_dssp CCEEECBCTTCEEEECT-TCCEEECCBCSSSCEEEE
T ss_pred CeEEccCCCccEEEECC-CccccCCCCCCCCceEEE
Confidence 46788999999999999 599998875 33 55544
No 17
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=65.38 E-value=3.1 Score=35.46 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=22.5
Q ss_pred EEEeeccCCCEEEEeCcccccccCCCC
Q 024481 230 CVAIPWQNGDVLLIDNLAVLHARRSSS 256 (267)
Q Consensus 230 ~~~~~Wq~GDvli~DN~rvlHgR~~f~ 256 (267)
.+....++||++|+|. +++||..+-.
T Consensus 210 ~v~~~~~aGdv~lf~~-~~~H~s~~N~ 235 (288)
T 2rdq_A 210 LLHSPMEPGDILLFHA-HMCHKSIPNL 235 (288)
T ss_dssp EECCCCCTTCEEEEET-TCCEEEECCC
T ss_pred eeecccCCCCEEEEeC-CceecCCCCC
Confidence 5778889999999999 6999987753
No 18
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=65.35 E-value=4 Score=35.65 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=25.1
Q ss_pred EEEeeccCCCEEEEeCcccccccCCC-CC-cceee
Q 024481 230 CVAIPWQNGDVLLIDNLAVLHARRSS-SR-PRHIL 262 (267)
Q Consensus 230 ~~~~~Wq~GDvli~DN~rvlHgR~~f-~g-~R~ll 262 (267)
.+.+..++||++|+|.. ++||..+- ++ .|+.+
T Consensus 229 ~v~~~~~aGdvl~f~~~-~~H~s~~N~S~~~R~~l 262 (310)
T 3emr_A 229 ISVPTGKAGSVTLFESN-TMHGSTSNITPYPRNNL 262 (310)
T ss_dssp CBCCCBSTTCEEEEETT-CCEEECCCCSSCCCCEE
T ss_pred eEEeeeCCceEEEEeCC-ceecCCCCCCCCCeEEE
Confidence 57788999999999995 99998765 33 55544
No 19
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=58.58 E-value=5.4 Score=33.11 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=30.5
Q ss_pred EEEeeccCCCEEEEeCc--------ccccccCCC-CCcceeeecc
Q 024481 230 CVAIPWQNGDVLLIDNL--------AVLHARRSS-SRPRHILASL 265 (267)
Q Consensus 230 ~~~~~Wq~GDvli~DN~--------rvlHgR~~f-~g~R~ll~~~ 265 (267)
.+.++-++|++|+|.|. +++|+..|- .|.|.++..+
T Consensus 165 ~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W 209 (216)
T 3itq_A 165 NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQW 209 (216)
T ss_dssp TEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEE
T ss_pred CCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEee
Confidence 47788899999999994 899999996 6888887654
No 20
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=57.71 E-value=6.1 Score=32.57 Aligned_cols=37 Identities=19% Similarity=0.206 Sum_probs=31.2
Q ss_pred cEEEeeccCCCEEEEeC--------cccccccCCC-CCcceeeecc
Q 024481 229 ECVAIPWQNGDVLLIDN--------LAVLHARRSS-SRPRHILASL 265 (267)
Q Consensus 229 ~~~~~~Wq~GDvli~DN--------~rvlHgR~~f-~g~R~ll~~~ 265 (267)
..+.++-++|++|||-| .+++|+..|- .|.|.++..+
T Consensus 169 ~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~W 214 (224)
T 2jig_A 169 RGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKW 214 (224)
T ss_dssp GSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEE
T ss_pred CceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEe
Confidence 35889999999999998 7999999997 6888776654
No 21
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=53.74 E-value=4.5 Score=36.04 Aligned_cols=19 Identities=37% Similarity=0.562 Sum_probs=16.8
Q ss_pred ccCCCEEEEeCcccccccC
Q 024481 235 WQNGDVLLIDNLAVLHARR 253 (267)
Q Consensus 235 Wq~GDvli~DN~rvlHgR~ 253 (267)
+++||++|++|.+|+-+|.
T Consensus 52 L~~GDlLV~NdTrVipARL 70 (345)
T 1wdi_A 52 LRPGDVLVFNESKVIPARL 70 (345)
T ss_dssp CCTTCEEEEEEEEECCEEE
T ss_pred cCCCCEEEecCceEEeeEE
Confidence 5799999999999987775
No 22
>1vky_A S-adenosylmethionine:tRNA ribosyltransferase-ISOM; TM0574, struct genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: e.53.1.1
Probab=53.38 E-value=4.9 Score=35.81 Aligned_cols=20 Identities=30% Similarity=0.458 Sum_probs=17.5
Q ss_pred ccCCCEEEEeCcccccccCC
Q 024481 235 WQNGDVLLIDNLAVLHARRS 254 (267)
Q Consensus 235 Wq~GDvli~DN~rvlHgR~~ 254 (267)
+++||++|++|.+|+-+|.-
T Consensus 62 L~~GDlLV~NdTrVipARL~ 81 (347)
T 1vky_A 62 LEPGDLLVLNVSKVIPARLY 81 (347)
T ss_dssp CCTTCEEEEEEEECCSCEEE
T ss_pred cCCCCEEEecCceEEeeEEE
Confidence 58999999999999887753
No 23
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=52.53 E-value=4.6 Score=36.03 Aligned_cols=20 Identities=40% Similarity=0.627 Sum_probs=17.5
Q ss_pred ccCCCEEEEeCcccccccCC
Q 024481 235 WQNGDVLLIDNLAVLHARRS 254 (267)
Q Consensus 235 Wq~GDvli~DN~rvlHgR~~ 254 (267)
+++||++|++|.+|+-+|.-
T Consensus 54 L~~GDlLV~NdTrVipARL~ 73 (346)
T 1yy3_A 54 FNEGDCLVLNNTRVLPARLF 73 (346)
T ss_dssp CCTTEEEEECCCCSCCEEEE
T ss_pred cCCCCEEEecCceEEeeEEE
Confidence 58999999999999887753
No 24
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=44.44 E-value=11 Score=32.95 Aligned_cols=27 Identities=11% Similarity=0.251 Sum_probs=22.0
Q ss_pred cEEEeeccCCCEEEEeCcccccccCCCC
Q 024481 229 ECVAIPWQNGDVLLIDNLAVLHARRSSS 256 (267)
Q Consensus 229 ~~~~~~Wq~GDvli~DN~rvlHgR~~f~ 256 (267)
..+.+..++||+||+|.+ ++||..+-.
T Consensus 220 ~~v~~~~~aGd~v~f~~~-~~H~s~~N~ 246 (319)
T 3gja_A 220 QAYPMVLKPGEAVIFWSN-TMHASLPHT 246 (319)
T ss_dssp -CCBCCBCTTEEEEEETT-SCEEECCCC
T ss_pred ceeEeeECCCeEEEEcCC-ccccCCCCC
Confidence 457788999999999985 899987754
No 25
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=34.68 E-value=20 Score=30.41 Aligned_cols=25 Identities=32% Similarity=0.406 Sum_probs=21.2
Q ss_pred EEeec-cCCCEEEEeCcccccccCCC
Q 024481 231 VAIPW-QNGDVLLIDNLAVLHARRSS 255 (267)
Q Consensus 231 ~~~~W-q~GDvli~DN~rvlHgR~~f 255 (267)
..+.+ ++||.+++|-.++.|+-+|-
T Consensus 199 ~~~~l~~p~d~llv~D~~~~H~vTpI 224 (254)
T 3pl0_A 199 VRFTLEQPWTVLLLDDQQVIHESTPL 224 (254)
T ss_dssp EEECCCSTTCEEEEETTTEEEEECCE
T ss_pred ceeEecCCCcEEEEeCCcccCCCCcc
Confidence 34444 99999999999999999886
No 26
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=31.70 E-value=16 Score=30.13 Aligned_cols=36 Identities=11% Similarity=0.026 Sum_probs=24.4
Q ss_pred CccccccccccCCC-----CceEEEeeeecCCCCCCCccee
Q 024481 53 KWLWLERYMLLPQF-----PSKLFFFCEVEPVSGGDTPLVL 88 (267)
Q Consensus 53 ~~lwHtD~~y~~~~-----P~~~~l~c~~~p~~GGeT~~aD 88 (267)
.+-+|.|......+ -.+.++..+..+.+||+|.|-+
T Consensus 123 ~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 163 (216)
T 3itq_A 123 QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPK 163 (216)
T ss_dssp CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETT
T ss_pred ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecC
Confidence 44579997653221 1256677777778999999965
No 27
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=28.91 E-value=31 Score=28.06 Aligned_cols=32 Identities=28% Similarity=0.494 Sum_probs=23.7
Q ss_pred EEeeccCCCEEEEeCcccccccC-CCCCcceeee
Q 024481 231 VAIPWQNGDVLLIDNLAVLHARR-SSSRPRHILA 263 (267)
Q Consensus 231 ~~~~Wq~GDvli~DN~rvlHgR~-~f~g~R~ll~ 263 (267)
-.+.|++|.++++|. ...|-.- .-++.|-+|.
T Consensus 146 ~~~~w~eGe~~~fDd-s~~Hev~N~~d~~RvvL~ 178 (197)
T 3rcq_A 146 ETKTWEEGKVLIFDD-SFEHEVWQDASSFRLIFI 178 (197)
T ss_dssp EEECCCBTCEEEECT-TSCEEEEECSSSCEEEEE
T ss_pred EEEEeeCCcEEEEcC-CeEEEEEECCCCCEEEEE
Confidence 467999999999999 6667543 3355777765
No 28
>2jov_A Hypothetical protein CPE0013; alpha + beta sandwich, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens} SCOP: d.349.1.1
Probab=27.64 E-value=42 Score=23.53 Aligned_cols=33 Identities=18% Similarity=0.331 Sum_probs=28.1
Q ss_pred CCCcHHHHHHHHHHhhccEEEeeccCCCEEEEe
Q 024481 212 SPYPEDIVYNLMKILEEECVAIPWQNGDVLLID 244 (267)
Q Consensus 212 ~~~~~~~l~~l~~~~~~~~~~~~Wq~GDvli~D 244 (267)
.++|.+.+..+.+.+.+..+.-+-+.||+++=|
T Consensus 27 ~pIPK~~i~e~m~~l~~i~V~APV~iGDVIi~n 59 (85)
T 2jov_A 27 KPVEISKWIDFSNVLSRLYVGVPTKSGNVVCKN 59 (85)
T ss_dssp EEECHHHHHHHHHHHTTCEECCCCCSSEEEEES
T ss_pred CCCCHHHHHHHHHHHhCCEEcCCcccCCEEEec
Confidence 378989888888888899999999999987654
No 29
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=27.28 E-value=23 Score=27.01 Aligned_cols=12 Identities=17% Similarity=0.415 Sum_probs=10.2
Q ss_pred eccCCCEEEEeC
Q 024481 234 PWQNGDVLLIDN 245 (267)
Q Consensus 234 ~Wq~GDvli~DN 245 (267)
..|+||+|+|.+
T Consensus 89 ~~~pGDlvff~~ 100 (142)
T 3gt2_A 89 QARKGDLIFYGP 100 (142)
T ss_dssp GCCTTCEEEESG
T ss_pred hCCCCCEEEeCC
Confidence 579999999974
No 30
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=25.52 E-value=25 Score=28.77 Aligned_cols=36 Identities=19% Similarity=0.102 Sum_probs=23.1
Q ss_pred CccccccccccCC--------CCceEEEeeeecCCCCCCCccee
Q 024481 53 KWLWLERYMLLPQ--------FPSKLFFFCEVEPVSGGDTPLVL 88 (267)
Q Consensus 53 ~~lwHtD~~y~~~--------~P~~~~l~c~~~p~~GGeT~~aD 88 (267)
.+-+|.|...... .-.+.++.-+.-+..||+|.|-+
T Consensus 110 ~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 153 (224)
T 2jig_A 110 KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPN 153 (224)
T ss_dssp CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETT
T ss_pred cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCC
Confidence 4457999764321 11245565666677899999964
No 31
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=22.69 E-value=27 Score=26.63 Aligned_cols=11 Identities=27% Similarity=0.607 Sum_probs=9.6
Q ss_pred eccCCCEEEEe
Q 024481 234 PWQNGDVLLID 244 (267)
Q Consensus 234 ~Wq~GDvli~D 244 (267)
.+||||+|+|.
T Consensus 67 ~l~pGDLvFf~ 77 (135)
T 2k1g_A 67 NLRTGDLVLFR 77 (135)
T ss_dssp GCCTTEEEEEE
T ss_pred HccCCcEEEEC
Confidence 57999999986
No 32
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=21.57 E-value=51 Score=27.65 Aligned_cols=35 Identities=20% Similarity=0.160 Sum_probs=29.0
Q ss_pred EEEeeccCCCEEEEeCcccccccCCC-CCcceeeecc
Q 024481 230 CVAIPWQNGDVLLIDNLAVLHARRSS-SRPRHILASL 265 (267)
Q Consensus 230 ~~~~~Wq~GDvli~DN~rvlHgR~~f-~g~R~ll~~~ 265 (267)
...++-++|++|+|... ++|+..|- .|.|..++.+
T Consensus 157 ~~~V~P~~G~~v~F~s~-~lH~v~pV~~G~R~~~~~W 192 (243)
T 3dkq_A 157 QQSIKLSAGSLVLYPSS-SLHQVTPVLSGERTAAFMW 192 (243)
T ss_dssp EEEECCCTTCEEEEETT-SEEEECCEEEECEEEEEEE
T ss_pred cEEEecCCCEEEEECCC-CeEcCccccccCEEEEEEe
Confidence 46788899999999874 79999997 5888887654
No 33
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=20.35 E-value=76 Score=25.84 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=26.1
Q ss_pred EEeeccCCCEEEEeCcccccccCCCCC-cceeeec
Q 024481 231 VAIPWQNGDVLLIDNLAVLHARRSSSR-PRHILAS 264 (267)
Q Consensus 231 ~~~~Wq~GDvli~DN~rvlHgR~~f~g-~R~ll~~ 264 (267)
..+.=++||+|||-.+ +.|+-.|+.+ ..|+-+|
T Consensus 169 ~~i~P~~G~lvlFpS~-l~H~V~p~~~~~~RiSIs 202 (216)
T 2rg4_A 169 RSVAPKVGDVLLWESW-LRHEVPMNMAEEDRISVS 202 (216)
T ss_dssp EEECCCTTEEEEEETT-SCEEECCCCSSSCEEEEE
T ss_pred eEecCCCCeEEEECCC-CEEeccCCCCCCCEEEEE
Confidence 4778899999999877 9999999866 3455443
No 34
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=20.10 E-value=43 Score=29.01 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=24.2
Q ss_pred EEeeccCCCEEEEeCcccccccCCCCCcceeee
Q 024481 231 VAIPWQNGDVLLIDNLAVLHARRSSSRPRHILA 263 (267)
Q Consensus 231 ~~~~Wq~GDvli~DN~rvlHgR~~f~g~R~ll~ 263 (267)
..+.|++|++.++||...=.....-+..|-+|+
T Consensus 140 ~~~~m~~GE~w~~d~~~~H~v~N~g~~~RIhLv 172 (290)
T 1e5r_A 140 TVIHMRPGEIWFLDAATVHSAVNFSEISRQSLC 172 (290)
T ss_dssp EEECCCTTEEEECCTTSCEEEEESSSSCCCEEE
T ss_pred EEEecCCCCEEEEcCCCeeEEEcCCCCCeEEEE
Confidence 678999999999998765434444445787776
Done!