BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024482
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis
thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/217 (90%), Positives = 208/217 (95%)
Query: 51 GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAML 110
GPDRRIFLP+GLLDRSEIPEYL GEV GDYGYDPFGL KKP++F+KYQA+ELIHARWAML
Sbjct: 64 GPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAML 123
Query: 111 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVG 170
GAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV AV+AE+VL+G
Sbjct: 124 GAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLG 183
Query: 171 GAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQA 230
GAEYYRITNGLD EDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNGRLAMFAMLGFF+QA
Sbjct: 184 GAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQA 243
Query: 231 YVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 267
YVTGEGPVENLAKHLSDPF NNLLTVI+G AERAPTL
Sbjct: 244 YVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 214 bits (545), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 138/209 (66%), Gaps = 9/209 (4%)
Query: 51 GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAML 110
GPDR FL G ++ PEYLTGE PGDYG+D GLS P F++Y+ ELIHARWA+L
Sbjct: 35 GPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92
Query: 111 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN---LVFAVIAEIV 167
GA G + PE +++ E VWFK GA + LNY G I+ ++ + ++V
Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVV 152
Query: 168 LVGGAEYYRITNG----LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 223
L+G AE YR G LD D L+PGGPFDPLGLA DPD FA LKVKEIKNGRLAMF+
Sbjct: 153 LMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSC 212
Query: 224 LGFFLQAYVTGEGPVENLAKHLSDPFANN 252
LGFF+QA VTG+GPV+NL HL+DP N
Sbjct: 213 LGFFVQAIVTGKGPVQNLTDHLADPTVNK 241
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 158/253 (62%), Gaps = 19/253 (7%)
Query: 15 TLLLSSPLLS--SPRRKPPL-------LPSLSPSPSPPLTKSSP-SGPDRRIFLPEGLLD 64
T+ LSSP+++ +P L + + P P + SP G DR ++L G L
Sbjct: 5 TMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYL--GPLS 62
Query: 65 RSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKF 124
E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE +
Sbjct: 63 -GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 121
Query: 125 GANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG- 180
G G EAVWFK G+ + L+Y G I + A+ A ++VL+G E YRI G
Sbjct: 122 GVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGP 180
Query: 181 -LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVE 239
++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+E
Sbjct: 181 LGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLAKHLSDPFANN 252
NLA HL+DP NN
Sbjct: 241 NLADHLADPVNNN 253
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/259 (48%), Positives = 156/259 (60%), Gaps = 31/259 (11%)
Query: 15 TLLLSSPLLSSPRRKPPLLPSLSPSPS-----------PPLTKSSPS-----GPDRRIFL 58
T+ LSSP + K LSPS S + KS+PS GPDR +L
Sbjct: 5 TMALSSPSFAGQAVK------LSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYL 58
Query: 59 PEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIP 118
E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + P
Sbjct: 59 GP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115
Query: 119 EAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYY 175
E + G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E Y
Sbjct: 116 ELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY 174
Query: 176 RITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVT 233
RI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VT
Sbjct: 175 RIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 234
Query: 234 GEGPVENLAKHLSDPFANN 252
G+GP+ENLA HL+DP NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 156/253 (61%), Gaps = 19/253 (7%)
Query: 15 TLLLSSPLLSSPRRK-PPLLP--------SLSPSPSPPLTKSSPS-GPDRRIFLPEGLLD 64
T+ LSSP + K P P S+ + + P+ SSP GPDR +L
Sbjct: 5 TMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP---F 61
Query: 65 RSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKF 124
E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE +
Sbjct: 62 SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 121
Query: 125 GANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG- 180
G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ G
Sbjct: 122 GVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180
Query: 181 -LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVE 239
++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+E
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 240 NLAKHLSDPFANN 252
NLA HL+DP NN
Sbjct: 241 NLADHLADPVNNN 253
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 145/223 (65%), Gaps = 10/223 (4%)
Query: 39 SPSPPLTKSSP-SGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKY 97
+ + P + SSP GPDR +L E P YLTGE P DYG+D GLS P+ F+K
Sbjct: 40 TKAKPASSSSPWYGPDRVKYLGP---FSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKN 96
Query: 98 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 155
+ E+IH RWAMLGA G + PE F + G G EAVWFK GA + L+Y G +
Sbjct: 97 RELEVIHCRWAMLGALGCVFPELFARNGIKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVH 155
Query: 156 INLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 212
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKE
Sbjct: 156 AQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKE 215
Query: 213 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 255
IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 216 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 144/220 (65%), Gaps = 10/220 (4%)
Query: 39 SPSPPLTKSSPS-GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKY 97
+ + P++ SP GPDR +L E P YLTGE PGDYG+D GLS P+ F+K
Sbjct: 39 TKAKPVSSGSPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKN 95
Query: 98 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 155
+ E+IH RWAMLGA G + PE F + G G EAVWFK G+ + L+Y G +
Sbjct: 96 RELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVH 154
Query: 156 INLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 212
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 155 AQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKE 214
Query: 213 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 148/227 (65%), Gaps = 13/227 (5%)
Query: 35 SLSPSPSPPLTKSSPS----GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKK 90
++ + + LT S+ + GPDR ++L E P YLTGE PGDYG+D GLS
Sbjct: 40 TMRKATTKKLTASASTSPWYGPDRVLYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSAD 96
Query: 91 PDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYF 150
P++F+K + E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y
Sbjct: 97 PENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYL 155
Query: 151 GKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQF 205
G + + A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA+DP+ F
Sbjct: 156 GNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAF 215
Query: 206 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
A LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/225 (50%), Positives = 146/225 (64%), Gaps = 10/225 (4%)
Query: 37 SPSPSPPLTKSSP-SGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 95
+ S + P++ SP GPDR +L E P YLTGE PGDYG+D GLS P+ F+
Sbjct: 37 TASKAKPVSSGSPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 96 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN-- 153
K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSL 152
Query: 154 IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKV 210
+ + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKV
Sbjct: 153 VHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 212
Query: 211 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 255
KEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 213 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 257
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 204 bits (520), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 153/249 (61%), Gaps = 15/249 (6%)
Query: 15 TLLLSSPLLSSPRRKPPL------LPSLSPSPSPPLTKSSPSGPDRRIFLPEGLLDRSEI 68
T+ LSSP L+ + + P P + S G DR ++L G L E
Sbjct: 5 TMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYL--GPLS-GEP 61
Query: 69 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANC 128
P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G
Sbjct: 62 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 121
Query: 129 GPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--LDL 183
G EAVWFK G+ + L+Y G I + A+ A ++VL+G E YRI G ++
Sbjct: 122 G-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEV 180
Query: 184 EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAK 243
D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA
Sbjct: 181 VDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 240
Query: 244 HLSDPFANN 252
HL+DP NN
Sbjct: 241 HLADPVNNN 249
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 139/207 (67%), Gaps = 9/207 (4%)
Query: 51 GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAML 110
GPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAML
Sbjct: 64 GPDRVLYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 120
Query: 111 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-EIV 167
GA G + PE + G G EAVWFK GA + L+Y G + I + A+ A +++
Sbjct: 121 GALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVI 179
Query: 168 LVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 225
L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMF+M G
Sbjct: 180 LMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 239
Query: 226 FFLQAYVTGEGPVENLAKHLSDPFANN 252
FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 240 FFVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 204 bits (518), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 154/258 (59%), Gaps = 10/258 (3%)
Query: 1 MSAVLLGLQLQVHQTLLLSSPLLSSPRRKPPLLPSLSPSPSPPLTKSSP-SGPDRRIFLP 59
M+A + L ++ P S R + + + + P++ SP GPDR +L
Sbjct: 1 MAAATMALSSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLG 60
Query: 60 EGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPE 119
E P YLTGE PGDYG+D GLS P F+K + E+IH RW MLGA G + PE
Sbjct: 61 P---FSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPE 117
Query: 120 AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYR 176
F + G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YR
Sbjct: 118 LFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 176
Query: 177 ITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTG 234
+ G ++ D L+PGG FDPLGLA DP+ FA L+VKEIKNGRLAMF+M GFF+QA VTG
Sbjct: 177 VAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTG 236
Query: 235 EGPVENLAKHLSDPFANN 252
+GP+ENLA HL+DP NN
Sbjct: 237 KGPLENLADHLADPVNNN 254
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 203 bits (517), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 139/210 (66%), Gaps = 9/210 (4%)
Query: 51 GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAML 110
GPDR +L E P YLTGE PGDYG+D GLS P+ FSK + E+IH+RWAML
Sbjct: 54 GPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAML 110
Query: 111 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIV 167
GA G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A +++
Sbjct: 111 GALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVI 169
Query: 168 LVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 225
L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M G
Sbjct: 170 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 229
Query: 226 FFLQAYVTGEGPVENLAKHLSDPFANNLLT 255
FF+QA VTG+GP+ENLA HLSDP NN +
Sbjct: 230 FFVQAIVTGKGPLENLADHLSDPVNNNAWS 259
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 144/223 (64%), Gaps = 10/223 (4%)
Query: 39 SPSPPLTKSSP-SGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKY 97
+ + PL+ SP GPDR +L E P YLTGE PGDYG+D GLS P+ F+K
Sbjct: 40 TKAKPLSSGSPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 96
Query: 98 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 155
+ E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVH 155
Query: 156 INLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 212
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVK
Sbjct: 156 AQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKH 215
Query: 213 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 255
IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 216 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 37 SPSPSPPLTKSSPS-GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 95
+ + + P + SP GPDR +L E P YLTGE PGDYG+D GLS P+ F+
Sbjct: 38 TATKAKPASSGSPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 96 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN-- 153
K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSL 153
Query: 154 IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKV 210
+ + A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKV
Sbjct: 154 VHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV 213
Query: 211 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
KEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 139/207 (67%), Gaps = 9/207 (4%)
Query: 51 GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAML 110
GPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAML
Sbjct: 64 GPDRVMYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 120
Query: 111 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-EIV 167
GA G + PE + G G EAVWFK GA + L+Y G + I + A+ A +++
Sbjct: 121 GALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVI 179
Query: 168 LVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 225
L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA +KVKEIKNGRLAMF+M G
Sbjct: 180 LMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFG 239
Query: 226 FFLQAYVTGEGPVENLAKHLSDPFANN 252
FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 240 FFVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/258 (48%), Positives = 155/258 (60%), Gaps = 25/258 (9%)
Query: 14 QTLLLSSPLLSSPRRKPPLLPSLS-----------PSPSPPLTKSSPS---GPDRRIFLP 59
T+ LSSP + K L PS S + S T SS S GPDR +L
Sbjct: 4 STMALSSPSFAGKAVK--LSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLG 61
Query: 60 EGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPE 119
E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE
Sbjct: 62 P---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 118
Query: 120 AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYR 176
+ G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YR
Sbjct: 119 LLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 177
Query: 177 ITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTG 234
+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG
Sbjct: 178 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
Query: 235 EGPVENLAKHLSDPFANN 252
+GP+ENLA HL+DP NN
Sbjct: 238 KGPLENLADHLADPVNNN 255
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 142/217 (65%), Gaps = 13/217 (5%)
Query: 45 TKSSPS----GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAY 100
KS+P+ GPDR +L +IP YLTGE PGDYG+D GLS P+ F+K +
Sbjct: 41 VKSAPTSIWYGPDRPKYLGP---FSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
Query: 101 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 158
E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 159 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 215
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKN 216
Query: 216 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/260 (46%), Positives = 158/260 (60%), Gaps = 22/260 (8%)
Query: 4 VLLGLQLQVHQTLLLSSPLLSSPR---RKPPLLPSLSPSPSPPLTKSSPSGPDRRIFLPE 60
L G QL+++ SS L + R RK ++ S SP GPDR +L
Sbjct: 15 TLAGKQLKLNP----SSQELGAARFTMRKSATTKKVASSGSPWY------GPDRVKYLGP 64
Query: 61 GLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEA 120
E P YLTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA G + PE
Sbjct: 65 ---FSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 121
Query: 121 FNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRI 177
++ G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YRI
Sbjct: 122 LSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRI 180
Query: 178 TNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGE 235
G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+
Sbjct: 181 AGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
Query: 236 GPVENLAKHLSDPFANNLLT 255
GP+ENLA HL+DP NN +
Sbjct: 241 GPLENLADHLADPVNNNAWS 260
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 201 bits (512), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 145/222 (65%), Gaps = 10/222 (4%)
Query: 37 SPSPSPPLTKSSPS-GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 95
+ S + P++ SSP GP+R +L E P YLTGE PGDYG+D GLS P+ F+
Sbjct: 38 TASKAKPVSSSSPWYGPNRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 96 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN-- 153
K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKGGSQIFSQGGLDYLGNPSL 153
Query: 154 IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKV 210
+ + A+ A ++VL+G E YR+ ++ D L+PGG FDPLGLA+DP+ FA LKV
Sbjct: 154 VHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 213
Query: 211 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
KEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 201 bits (512), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/258 (47%), Positives = 154/258 (59%), Gaps = 25/258 (9%)
Query: 14 QTLLLSSPLLSSPRRKPPLLPSLS-----------PSPSPPLTKSSPS---GPDRRIFLP 59
T+ LSSP L+ K L P+ S + P T S S GPDR +L
Sbjct: 4 STMALSSPSLAGKAVK--LGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLG 61
Query: 60 EGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPE 119
E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE
Sbjct: 62 P---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 118
Query: 120 AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYR 176
+ G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR
Sbjct: 119 LLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 177
Query: 177 ITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTG 234
I G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG
Sbjct: 178 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
Query: 235 EGPVENLAKHLSDPFANN 252
+GP+ENLA HL+DP NN
Sbjct: 238 KGPLENLADHLADPVNNN 255
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 201 bits (511), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/255 (49%), Positives = 160/255 (62%), Gaps = 23/255 (9%)
Query: 12 VHQTLLLSSPLLSSPRRKPPLLPSLSPSPSP----PLTKSSPS----GPDRRIFLPEGLL 63
+HQT +S L ++PRR L+ + S KS+P GPDR P+ L
Sbjct: 6 LHQT---TSFLGTAPRRDE-LVRRVGDSGGRITMRRTVKSAPQSIWYGPDR----PKYLG 57
Query: 64 DRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFN 122
SE P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE +
Sbjct: 58 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILS 117
Query: 123 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN 179
K G G EAVWFK GA + L+Y G + + A+ A ++VL+G E YR+
Sbjct: 118 KNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGG 176
Query: 180 GLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 237
G E DK++PGG FDPLGLA DPD FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP
Sbjct: 177 GPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 236
Query: 238 VENLAKHLSDPFANN 252
+ENL H++DP ANN
Sbjct: 237 IENLFDHVADPVANN 251
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 201 bits (511), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/255 (49%), Positives = 160/255 (62%), Gaps = 23/255 (9%)
Query: 12 VHQTLLLSSPLLSSPRRKPPLLPSLSPSPSP----PLTKSSPS----GPDRRIFLPEGLL 63
+HQT +S L ++PRR L+ + S KS+P GPDR P+ L
Sbjct: 6 LHQT---TSFLGTAPRRDE-LVRRVGDSGGRITMRRTVKSAPQSIWYGPDR----PKYLG 57
Query: 64 DRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFN 122
SE P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE +
Sbjct: 58 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILS 117
Query: 123 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN 179
K G G EAVWFK GA + L+Y G + + A+ A ++VL+G E YR+
Sbjct: 118 KNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGG 176
Query: 180 GLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 237
G E DK++PGG FDPLGLA DPD FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP
Sbjct: 177 GPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 236
Query: 238 VENLAKHLSDPFANN 252
+ENL H++DP ANN
Sbjct: 237 IENLFDHVADPVANN 251
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 200 bits (509), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 142/219 (64%), Gaps = 10/219 (4%)
Query: 43 PLTKSSP-SGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYE 101
P++ SP GPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E
Sbjct: 43 PVSSGSPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 99
Query: 102 LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLV 159
+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + +
Sbjct: 100 VIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSI 158
Query: 160 FAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 216
A+ A ++VL+G E YR+ ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNG
Sbjct: 159 LAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNG 218
Query: 217 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 255
RLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 219 RLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWS 257
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 200 bits (509), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 146/224 (65%), Gaps = 10/224 (4%)
Query: 35 SLSPSPSPPLTKSSP-SGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDD 93
++ + S ++ SP GPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 24 TMRKTASKSVSSGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPET 80
Query: 94 FSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN 153
F+K + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G
Sbjct: 81 FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNP 139
Query: 154 --IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALL 208
+ + A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA L
Sbjct: 140 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAEL 199
Query: 209 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
KVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 200 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 243
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 200 bits (509), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 142/220 (64%), Gaps = 10/220 (4%)
Query: 39 SPSPPLTKSSP-SGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKY 97
+ + P++ SP GPDR +L E P YLTGE PGDYG+D GLS P+ F+K
Sbjct: 40 TKAKPVSSGSPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKN 96
Query: 98 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 155
+ E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVH 155
Query: 156 INLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 212
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 156 AQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 215
Query: 213 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
IKNGRLAMF+M GFF+QA VTG+GP++NL HL+DP NN
Sbjct: 216 IKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNN 255
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 200 bits (508), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 111/223 (49%), Positives = 143/223 (64%), Gaps = 10/223 (4%)
Query: 39 SPSPPLTKSSP-SGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKY 97
+ + P++ SP GPDR +L E P YLTGE PGDYG+D LS P+ F+K
Sbjct: 40 TKAKPVSSGSPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAELSADPETFAKN 96
Query: 98 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 155
+ E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVH 155
Query: 156 INLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 212
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 156 AQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE 215
Query: 213 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 255
IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 216 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 200 bits (508), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 146/230 (63%), Gaps = 15/230 (6%)
Query: 28 RKPPLLPSLSPSPSPPLTKSSPSGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGL 87
RK P ++ S SP GPDR +L E P YLTGE PGDYG+D GL
Sbjct: 31 RKTVGKPKVAASGSPWY------GPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGL 81
Query: 88 SKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL 147
S P+ F+K + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L
Sbjct: 82 SADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGL 140
Query: 148 NYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDP 202
+Y G I + A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP
Sbjct: 141 DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDP 200
Query: 203 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 201 EAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 250
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 156/255 (61%), Gaps = 22/255 (8%)
Query: 14 QTLLLSSPLLSSPRRKPPLLPSLS-----------PSPSPPLTKSSPSGPDRRIFLPEGL 62
T+ LSSP L+ K + PS S + P++ S GPDR +L
Sbjct: 4 STMALSSPALAGKAVK--VAPSSSELFGNGRVSMRKTVKAPVSDSPWYGPDRVKYLGP-- 59
Query: 63 LDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFN 122
E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE
Sbjct: 60 -FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 118
Query: 123 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN 179
+ G G EAVWFK G+ + L+Y G + + ++ A +++L+G E YR+
Sbjct: 119 RNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAG 177
Query: 180 G--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 237
G ++ D L+PGG FDPLGLA+DP++ A LKVKE+KNGRLAMF+M GFF+QA VTG+GP
Sbjct: 178 GPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 237
Query: 238 VENLAKHLSDPFANN 252
+ENLA HL+DP NN
Sbjct: 238 LENLADHLADPVNNN 252
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 129/191 (67%), Gaps = 6/191 (3%)
Query: 67 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 126
E P YL GE GDYG+D GLS P+ F++ + E+IHARWAMLGA G + PE K G
Sbjct: 67 ETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGV 126
Query: 127 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--L 181
G EAVWFK GA + L+Y G + + A+ A ++VL+G E YR+ G
Sbjct: 127 KFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 185
Query: 182 DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 241
++ D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 186 EVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 245
Query: 242 AKHLSDPFANN 252
HL+DP ANN
Sbjct: 246 NDHLADPVANN 256
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 132/191 (69%), Gaps = 6/191 (3%)
Query: 67 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 126
+ P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G I PE +K G
Sbjct: 63 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGV 122
Query: 127 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDL 183
G EAVWFK GA + L+Y G + + A+ A ++VL+G E YR+ G
Sbjct: 123 QFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLG 181
Query: 184 E--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 241
E D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 182 EGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 241
Query: 242 AKHLSDPFANN 252
A H++DP ANN
Sbjct: 242 ADHIADPVANN 252
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 140/207 (67%), Gaps = 9/207 (4%)
Query: 51 GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAML 110
GPDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAML
Sbjct: 51 GPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 107
Query: 111 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIV 167
GA G + PE + G G EAVWFK G+ + L+Y G I + A+ A ++V
Sbjct: 108 GALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 166
Query: 168 LVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 225
L+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA +KVKE+KNGRLAMF+M G
Sbjct: 167 LMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFG 226
Query: 226 FFLQAYVTGEGPVENLAKHLSDPFANN 252
FF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 143/225 (63%), Gaps = 10/225 (4%)
Query: 37 SPSPSPPLTKSSP-SGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 95
+ + + P++ SP GPDR +L E P YLTGE PGDYG+D GLS P+ F+
Sbjct: 38 TATKAKPVSSGSPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 96 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN-- 153
K + E+IH RWAMLGA G + PE F + G G EAVW K G+ + L+Y G
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYLGNPSL 153
Query: 154 IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKV 210
+ + A+ A +++L+G E YR+ G + D L+PGG FDPLGLA+DP+ FA LKV
Sbjct: 154 VHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKV 213
Query: 211 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 255
KE KNGRLAMF+M GFF+QA VTG+GP+ENLA HL DP NN +
Sbjct: 214 KETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWS 258
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 198 bits (504), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 153/259 (59%), Gaps = 27/259 (10%)
Query: 14 QTLLLSSPLLSSPRRKPPLLPSLSPSPSPPL---------TKSSPSGPDRRIFLPEGLLD 64
T+ LSSP + K LSP+ S L T + P GP + +
Sbjct: 4 STMALSSPAFAGKAVK------LSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVK 57
Query: 65 -----RSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPE 119
E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE
Sbjct: 58 YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 117
Query: 120 AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYR 176
+ G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR
Sbjct: 118 LLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 176
Query: 177 IT-NG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVT 233
+ NG + ED L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VT
Sbjct: 177 VAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 236
Query: 234 GEGPVENLAKHLSDPFANN 252
G+GP+ENLA HL+DP NN
Sbjct: 237 GKGPIENLADHLADPVNNN 255
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 198 bits (504), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 132/191 (69%), Gaps = 6/191 (3%)
Query: 67 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 126
+ P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE +K G
Sbjct: 36 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGV 95
Query: 127 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDL 183
G EAVWFK G+ + L+Y G I + A+ A ++VL+G E YR+ G
Sbjct: 96 TFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLG 154
Query: 184 E--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 241
E DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 155 EGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 214
Query: 242 AKHLSDPFANN 252
+ H++DP ANN
Sbjct: 215 SDHIADPVANN 225
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 131/191 (68%), Gaps = 6/191 (3%)
Query: 67 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 126
+ P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE +K G
Sbjct: 64 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGV 123
Query: 127 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAV-IAEIVLVGGAEYYRITNGLDL 183
G EAVWFK G+ + L+Y G I + A+ A++VL+G E YR+ G
Sbjct: 124 TFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLG 182
Query: 184 E--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 241
E DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 183 EGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
Query: 242 AKHLSDPFANN 252
H++DP ANN
Sbjct: 243 YDHVADPVANN 253
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 132/191 (69%), Gaps = 6/191 (3%)
Query: 67 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 126
+ P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE +K G
Sbjct: 64 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGV 123
Query: 127 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDL 183
G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YR+ G
Sbjct: 124 KFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLG 182
Query: 184 E--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 241
E DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 183 EGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
Query: 242 AKHLSDPFANN 252
+ H++DP ANN
Sbjct: 243 SDHINDPVANN 253
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 131/189 (69%), Gaps = 6/189 (3%)
Query: 69 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANC 128
P YL+GE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE K G
Sbjct: 66 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKF 125
Query: 129 GPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--LDL 183
G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ G ++
Sbjct: 126 G-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 184
Query: 184 EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAK 243
ED ++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENL+
Sbjct: 185 EDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSD 244
Query: 244 HLSDPFANN 252
HL+DP NN
Sbjct: 245 HLADPAVNN 253
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 132/192 (68%), Gaps = 7/192 (3%)
Query: 67 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 126
E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE + G
Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGV 124
Query: 127 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIT-NG-- 180
G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ NG
Sbjct: 125 KFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPL 183
Query: 181 LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVEN 240
+ ED L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+EN
Sbjct: 184 GEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 243
Query: 241 LAKHLSDPFANN 252
LA HL+DP NN
Sbjct: 244 LADHLADPVNNN 255
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 132/192 (68%), Gaps = 7/192 (3%)
Query: 67 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 126
E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE + G
Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGV 124
Query: 127 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIT-NG-- 180
G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ NG
Sbjct: 125 KFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPL 183
Query: 181 LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVEN 240
+ ED L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+EN
Sbjct: 184 GEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 243
Query: 241 LAKHLSDPFANN 252
LA HL+DP NN
Sbjct: 244 LADHLADPVNNN 255
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 143/224 (63%), Gaps = 10/224 (4%)
Query: 35 SLSPSPSPPLTKSSPS-GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDD 93
S+ + S ++ SP GPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 14 SMRKTASKTVSSGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPET 70
Query: 94 FSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN 153
F+K + E+IH+RWAMLGA G + PE + G G EA WFK G+ + L+Y G
Sbjct: 71 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYLGNQ 129
Query: 154 --IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALL 208
I + A+ A +++L+G E YRI G ++ D ++PGG FDPL LA DP+ FA L
Sbjct: 130 SLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAEL 189
Query: 209 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL++P NN
Sbjct: 190 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNN 233
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 197 bits (501), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 143/236 (60%), Gaps = 9/236 (3%)
Query: 22 LLSSPRRKPPLLPSLSPSPSPPLTKSSPSGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYG 81
L SS + S+ + + S GPDR +L E P YLTGE PGDYG
Sbjct: 21 LSSSSEVQGDARVSMRKTAATKKVGSPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYG 77
Query: 82 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL 141
+D GLS P+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ +
Sbjct: 78 WDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKKGSQI 136
Query: 142 LDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPL 196
L Y G + + A+ A ++VL+G E YR+ G ++ D L+PGG FDPL
Sbjct: 137 FSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPL 196
Query: 197 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
GLA D + FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 197 GLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 197 bits (501), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 131/191 (68%), Gaps = 6/191 (3%)
Query: 67 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 126
+ P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE +K G
Sbjct: 64 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGV 123
Query: 127 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDL 183
G EAVWFK G+ + L+Y G I + AV A ++VL+G E YR+ G
Sbjct: 124 KFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLG 182
Query: 184 E--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 241
E DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 183 EGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
Query: 242 AKHLSDPFANN 252
H++DP ANN
Sbjct: 243 FDHVADPVANN 253
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 197 bits (500), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 145/224 (64%), Gaps = 10/224 (4%)
Query: 35 SLSPSPSPPLTKSSPS-GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDD 93
S+ + + ++ SP GPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 32 SMRKTVTKQVSSGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPET 88
Query: 94 FSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN 153
F+K + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G
Sbjct: 89 FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNP 147
Query: 154 --IPINLVFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALL 208
I + A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA L
Sbjct: 148 SLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAEL 207
Query: 209 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
KVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+ P NN
Sbjct: 208 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNN 251
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 139/227 (61%), Gaps = 16/227 (7%)
Query: 45 TKSSPS--------GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSK 96
TK++P+ GPDR +L + P YLTGE PGDYG+D GLS P+ F K
Sbjct: 27 TKAAPAKSAGIEWYGPDRAKWLGP---FSTNTPAYLTGEFPGDYGWDTAGLSADPETFKK 83
Query: 97 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 156
Y+ E+IHARWA+LGA G + PE + + E VWFK GA + L+Y G I
Sbjct: 84 YRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALI 143
Query: 157 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 211
N+V + ++VL+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 144 HAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 203
Query: 212 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 258
EIKNGRLAMF+ GFF+QA VTG+GP++NLA HL+DP NN +
Sbjct: 204 EIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAAT 250
>sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1
Length = 253
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 132/207 (63%), Gaps = 8/207 (3%)
Query: 51 GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAML 110
GP+R +L G + P YLTGE PGDYG+D GLS P+ F +Y+ ELIHARWAML
Sbjct: 38 GPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 95
Query: 111 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIV 167
GA G PE K G G EAVWFK GA + L+Y G + N+V +++
Sbjct: 96 GALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVI 154
Query: 168 LVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 225
L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVKEIKNGRLA F+M G
Sbjct: 155 LMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFG 214
Query: 226 FFLQAYVTGEGPVENLAKHLSDPFANN 252
FF+QA VTG+GPV+NL HL++P NN
Sbjct: 215 FFVQAIVTGKGPVQNLDDHLANPTVNN 241
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 142/218 (65%), Gaps = 15/218 (6%)
Query: 45 TKSSPS----GPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQA 99
KS+P GPDR P+ L SE IP YLTGE PGDYG+D GLS P+ F++ +
Sbjct: 41 VKSAPESIWYGPDR----PKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 100 YELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPIN 157
E+IH+RWAMLGA G PE K G G EAVWFK G+ + L+Y G I
Sbjct: 97 LEVIHSRWAMLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQ 155
Query: 158 LVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIK 214
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVKE+K
Sbjct: 156 SILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELK 215
Query: 215 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 252
NGRLAMF+M GFF+QA VTG+GP++NL H++DP ANN
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 136/207 (65%), Gaps = 9/207 (4%)
Query: 51 GPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAML 110
GPDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAML
Sbjct: 51 GPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 107
Query: 111 GAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIV 167
GA G + PE + G G EAVWFK G+ + L+Y G I + A+ A ++V
Sbjct: 108 GALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 166
Query: 168 LVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 225
L+G E YRI G ++ D L+PGG FDPLGLA DP+ F LKVKE+K GRLAM +M G
Sbjct: 167 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFG 226
Query: 226 FFLQAYVTGEGPVENLAKHLSDPFANN 252
FF+QA VTG+GP+ENLA H++DP NN
Sbjct: 227 FFVQAIVTGKGPLENLADHIADPVNNN 253
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 129/192 (67%), Gaps = 7/192 (3%)
Query: 67 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 126
E P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE + G
Sbjct: 64 EPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGV 123
Query: 127 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDL 183
G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ L
Sbjct: 124 KFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPL 182
Query: 184 ---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVEN 240
ED L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+EN
Sbjct: 183 GEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 242
Query: 241 LAKHLSDPFANN 252
LA HL+DP NN
Sbjct: 243 LADHLADPVNNN 254
>sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII type 1 (Fragment)
OS=Cucumis sativus PE=2 SV=1
Length = 206
Score = 194 bits (492), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 131/191 (68%), Gaps = 6/191 (3%)
Query: 67 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGA 126
E P YLTGE PGDYG+D GLS P+ F+K + E+IH+ WAMLGA G + PE ++ G
Sbjct: 5 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGV 64
Query: 127 NCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG--L 181
G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YRI G
Sbjct: 65 KFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLG 123
Query: 182 DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 241
++ D ++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 124 EVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 183
Query: 242 AKHLSDPFANN 252
A HL+DP NN
Sbjct: 184 ADHLADPVNNN 194
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.141 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,799,032
Number of Sequences: 539616
Number of extensions: 5824709
Number of successful extensions: 21466
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 20826
Number of HSP's gapped (non-prelim): 348
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)