Your job contains 1 sequence.
>024485
MLILILVPVFLSRWPYIIMILFRFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTA
EHLPPPRPKRKAAHPYPQKASKNAPMLSQVSGSFQSSSAQLEPGHFLRPDSSSMLMIPMA
SAATSWTNNVQTVSLSPASKGPEVANNRSNSTDSTPKARVSGELTDQGGELTDQGNNSHP
LRVLPDFAQVYTFIGSVFDPNASDHVQKLKKMDPIDVETVLLLMRNLSINLTSPDFEDHR
RLLSSYEIDPETANHSGTNNLLLGGGQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024485
(267 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2149589 - symbol:AT5G52660 species:3702 "Arabi... 665 2.5e-65 1
TAIR|locus:2124928 - symbol:AT4G01280 species:3702 "Arabi... 478 1.6e-45 1
TAIR|locus:2025411 - symbol:ASG4 "ALTERED SEED GERMINATIO... 261 5.9e-42 2
TAIR|locus:2075049 - symbol:RVE8 "REVEILLE 8" species:370... 435 5.9e-41 1
TAIR|locus:2151251 - symbol:LCL1 "LHY/CCA1-like 1" specie... 408 4.3e-38 1
DICTYBASE|DDB_G0288783 - symbol:mybG "myb domain-containi... 183 3.1e-25 2
TAIR|locus:2044345 - symbol:CCA1 "circadian clock associa... 113 0.00014 2
TAIR|locus:2167210 - symbol:RVE1 "REVEILLE 1" species:370... 115 0.00028 1
TAIR|locus:2169135 - symbol:RVE2 "REVEILLE 2" species:370... 109 0.00080 1
>TAIR|locus:2149589 [details] [associations]
symbol:AT5G52660 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009737 "response
to abscisic acid stimulus" evidence=IEP] [GO:0009739 "response to
gibberellin stimulus" evidence=IEP] [GO:0009751 "response to
salicylic acid stimulus" evidence=IEP] [GO:0009753 "response to
jasmonic acid stimulus" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 EMBL:CP002688
GO:GO:0046686 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237512 eggNOG:NOG279643 EMBL:BT002002 EMBL:AY550303
EMBL:BT025882 IPI:IPI00536078 RefSeq:NP_568776.2 UniGene:At.29606
UniGene:At.67328 ProteinModelPortal:Q8H0W3 SMR:Q8H0W3
EnsemblPlants:AT5G52660.2 GeneID:835343 KEGG:ath:AT5G52660
TAIR:At5g52660 InParanoid:Q8H0W3 OMA:STSEPND PhylomeDB:Q8H0W3
ProtClustDB:CLSN2680521 ArrayExpress:Q8H0W3 Genevestigator:Q8H0W3
Uniprot:Q8H0W3
Length = 331
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 145/242 (59%), Positives = 163/242 (67%)
Query: 24 FDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTAEHLXXXXXXXXXXXXXXQKASKN 83
FDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQK+GT EHL QKA KN
Sbjct: 90 FDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHKN 149
Query: 84 APMLXXXXXXXXXXXXXLEPGHFLRPDSSSMLMI-PMASAATSWTNNVQTVSLSPASKGP 142
+ +P RP+SSSMLM P +AA WTNN QT+S +P K
Sbjct: 150 VQLQVPGSFKSTSEPN--DPSFMFRPESSSMLMTSPTTAAAAPWTNNAQTISFTPLPKAG 207
Query: 143 EVANNR-SNSTDSTPKARVSGELTDQGGELTDQGNNSHPLRVLPDFAQVYTFIGSVFDPN 201
ANN S+S+++TP+ R + D GN H LRVLPDFAQVY FIGSVFDP
Sbjct: 208 AGANNNCSSSSENTPRPR-------SNRDARDHGNVGHSLRVLPDFAQVYGFIGSVFDPY 260
Query: 202 ASDHVQKLKKMDPIDVETVLLLMRNLSINLTSPDFEDHRRLLSSYEIDPETA-NHSGTNN 260
AS+H+QKLKKMDPIDVETVLLLMRNLSINL+SPDFEDHRRLLSSY+I ETA +H G N
Sbjct: 261 ASNHLQKLKKMDPIDVETVLLLMRNLSINLSSPDFEDHRRLLSSYDIGSETATDHGGVNK 320
Query: 261 LL 262
L
Sbjct: 321 TL 322
>TAIR|locus:2124928 [details] [associations]
symbol:AT4G01280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0000303 "response
to superoxide" evidence=RCA] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 GO:GO:0046686
EMBL:CP002687 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237512 ProtClustDB:CLSN2682863
EMBL:AB493668 IPI:IPI00656826 RefSeq:NP_001031568.1
UniGene:At.44234 ProteinModelPortal:C0SVG5 SMR:C0SVG5
EnsemblPlants:AT4G01280.2 GeneID:827903 KEGG:ath:AT4G01280
TAIR:At4g01280 eggNOG:NOG272389 OMA:KSGANEH PhylomeDB:C0SVG5
Genevestigator:C0SVG5 Uniprot:C0SVG5
Length = 303
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 111/231 (48%), Positives = 140/231 (60%)
Query: 21 LFRFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTAEHLXXXXXXXXXXXXXXQKA 80
L FDRDWKKIEAF+GSKTV+QIRSHAQKYFLKVQK+G EHL KA
Sbjct: 74 LHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLKVQKSGANEHLPPPRPKRKASHPYPIKA 133
Query: 81 SKNAPMLXXXXXXXXXXXXXLEPGHFLRPDSSSML--MIPMASAATSWTNNVQTVSLSPA 138
KN + LEPG+ DS S++ AS ++SW N+ T P
Sbjct: 134 PKN---VAYTSLPSSSTLPLLEPGYLYSSDSKSLMGNQAVCASTSSSW-NHESTNLPKPV 189
Query: 139 SKGPEVANNRSNSTDSTPKARVSGELTDQGGELTDQGNNSH---PLRVLPDFAQVYTFIG 195
EV ++T P R E T++ +T N P RV+P+FA+VY+FIG
Sbjct: 190 I---EVEEPGVSATAPLPNNRCRQEDTERVRAVTKPNNEESCEKPHRVMPNFAEVYSFIG 246
Query: 196 SVFDPNASDHVQKLKKMDPIDVETVLLLMRNLSINLTSPDFEDHRRLLSSY 246
SVFDPN S H+Q+LK+MDPI++ETVLLLM+NLS+NLTSP+F + RRL+SSY
Sbjct: 247 SVFDPNTSGHLQRLKQMDPINMETVLLLMQNLSVNLTSPEFAEQRRLISSY 297
>TAIR|locus:2025411 [details] [associations]
symbol:ASG4 "ALTERED SEED GERMINATION 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0009651 "response to salt stress" evidence=IEP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:Y12776
EMBL:AC061957 GO:GO:0003677 GO:GO:0009651 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY519508 EMBL:AJ937211 EMBL:BT029347
IPI:IPI00536561 RefSeq:NP_171659.1 UniGene:At.49839
ProteinModelPortal:Q6R0H0 SMR:Q6R0H0 IntAct:Q6R0H0
EnsemblPlants:AT1G01520.1 GeneID:839337 KEGG:ath:AT1G01520
TAIR:At1g01520 eggNOG:KOG0724 HOGENOM:HOG000237512
InParanoid:Q6R0H0 OMA:SHIMEQG PhylomeDB:Q6R0H0
ProtClustDB:CLSN2682863 Genevestigator:Q6R0H0 Uniprot:Q6R0H0
Length = 287
Score = 261 (96.9 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 48/77 (62%), Positives = 64/77 (83%)
Query: 170 ELTDQGNNSHPLRVLPDFAQVYTFIGSVFDPNASDHVQKLKKMDPIDVETVLLLMRNLSI 229
E DQ + P RV P+FA+VY FIGSVFDP + HV++LK+MDPI++ETVLLLM+NLS+
Sbjct: 208 ETNDQESCGKPHRVAPNFAEVYNFIGSVFDPKTTGHVKRLKEMDPINLETVLLLMKNLSV 267
Query: 230 NLTSPDFEDHRRLLSSY 246
NLTSP+F++ R+L+SSY
Sbjct: 268 NLTSPEFDEQRKLISSY 284
Score = 200 (75.5 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 38/43 (88%), Positives = 40/43 (93%)
Query: 21 LFRFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTAEHL 63
L FDRDWKKI+AF+GSKTVIQIRSHAQKYFLKVQKNGT EHL
Sbjct: 76 LHLFDRDWKKIKAFVGSKTVIQIRSHAQKYFLKVQKNGTKEHL 118
>TAIR|locus:2075049 [details] [associations]
symbol:RVE8 "REVEILLE 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0032922 "circadian
regulation of gene expression" evidence=IMP] [GO:0043966 "histone
H3 acetylation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0032922 GO:GO:0048573 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
GO:GO:0043966 ProtClustDB:CLSN2689417 EMBL:AY091106 EMBL:AY122969
IPI:IPI00517009 RefSeq:NP_187571.2 UniGene:At.40072
ProteinModelPortal:Q8RWU3 SMR:Q8RWU3 STRING:Q8RWU3 PRIDE:Q8RWU3
EnsemblPlants:AT3G09600.1 GeneID:820117 KEGG:ath:AT3G09600
TAIR:At3g09600 InParanoid:Q8RWU3 OMA:RVISPQH PhylomeDB:Q8RWU3
Genevestigator:Q8RWU3 Uniprot:Q8RWU3
Length = 298
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 104/224 (46%), Positives = 127/224 (56%)
Query: 24 FDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTAEHLXXXXXXXXXXXXXXQKASKN 83
FDRDWKKIE F+GSKTVIQIRSHAQKYFLKVQKNGT H+ QKASKN
Sbjct: 61 FDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKN 120
Query: 84 APMLXXXXXXXXXXXXXLEPGHFLRPDSSSMLMIPMASAATSWTNNVQTVSLSPASKGPE 143
A M PG + D +SML+ + S ++ SKG
Sbjct: 121 AQMPLQVSTSFTTTRNGDMPG-YASWDDASMLLNRVISPQHELAT-LRGAEADIGSKG-- 176
Query: 144 VANNRSNSTDSTPKARVSGELTDQGGELTDQGNNSHPLRVLPDFAQVYTFIGSVFDPNAS 203
+ N S ST S T G E+ + L +PDFA+VY FIGSVFDP
Sbjct: 177 LLNVSSPSTSGMG----SSSRTVSGSEIVRKAKQPPVLHGVPDFAEVYNFIGSVFDPETR 232
Query: 204 DHVQKLKKMDPIDVETVLLLMRNLSINLTSPDFEDHRRLLSSYE 247
HV+KLK+MDPI+ ETVLLLMRNL++NL++PD E R++L SY+
Sbjct: 233 GHVEKLKEMDPINFETVLLLMRNLTVNLSNPDLESTRKVLLSYD 276
>TAIR|locus:2151251 [details] [associations]
symbol:LCL1 "LHY/CCA1-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0007623 GO:GO:0009651 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
EMBL:AY519514 EMBL:AJ937209 IPI:IPI00528959 RefSeq:NP_568108.1
RefSeq:NP_850756.1 UniGene:At.20108 ProteinModelPortal:Q6R0G4
SMR:Q6R0G4 STRING:Q6R0G4 EnsemblPlants:AT5G02840.1
EnsemblPlants:AT5G02840.2 GeneID:831766 KEGG:ath:AT5G02840
TAIR:At5g02840 eggNOG:NOG319149 InParanoid:Q6R0G4 OMA:AYTITKS
PhylomeDB:Q6R0G4 ProtClustDB:CLSN2689417 Genevestigator:Q6R0G4
Uniprot:Q6R0G4
Length = 293
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 99/216 (45%), Positives = 125/216 (57%)
Query: 24 FDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTAEHLXXXXXXXXXXXXXXQKASKN 83
FDRDWKKIE F+GSKTVIQIRSHAQKYFLKVQKNGT H+ QKASKN
Sbjct: 66 FDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKN 125
Query: 84 APMLXXXXXXXXXXXXXLEPGHFLRPDSSSMLMIPMASAATSWTNNVQTVSLSPASKGP- 142
A M L PG+ D +S L+ S + + T+ + G
Sbjct: 126 AQMSLHVSMSFPTQINNL-PGYTPWDDDTSALLNIAVSGVIPPEDELDTLCGAEVDVGSN 184
Query: 143 EVANNRSNSTDSTPKARVSGELTDQGG-ELTDQGNNSHPLRVLPDFAQVYTFIGSVFDPN 201
++ + S S + S L+D G L Q + H L PDFA+VY FIGSVFDP+
Sbjct: 185 DMISETSPSASGIGSS--SRTLSDSKGLRLAKQAPSMHGL---PDFAEVYNFIGSVFDPD 239
Query: 202 ASDHVQKLKKMDPIDVETVLLLMRNLSINLTSPDFE 237
+ ++KLK+MDPI+ ETVLLLMRNL++NL++PDFE
Sbjct: 240 SKGRMKKLKEMDPINFETVLLLMRNLTVNLSNPDFE 275
>DICTYBASE|DDB_G0288783 [details] [associations]
symbol:mybG "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0288783 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AAFI02000125 RefSeq:XP_636518.1 HSSP:Q5VVJ2
ProteinModelPortal:Q54IF9 PRIDE:Q54IF9 EnsemblProtists:DDB0220514
GeneID:8626803 KEGG:ddi:DDB_G0288783 eggNOG:NOG279643 OMA:NNTGERI
Uniprot:Q54IF9
Length = 423
Score = 183 (69.5 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 33/40 (82%), Positives = 37/40 (92%)
Query: 24 FDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTAEHL 63
FDRDWKKIE+F+GSKTVIQIRSHAQKYF+KVQKN T E +
Sbjct: 59 FDRDWKKIESFVGSKTVIQIRSHAQKYFIKVQKNNTGERI 98
Score = 132 (51.5 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 35/148 (23%), Positives = 72/148 (48%)
Query: 104 GHFLRPDSSSMLMIPMASAATSWTN------NVQTVSLSPASKGPEVANNRSNSTDSTPK 157
G F+ PDS S +S+ +W N+ ++P+ ++ + +
Sbjct: 121 GAFI-PDSLSGNHFISSSSFATWMTYRGLMPNISESQINPSDLQKQL-EQLQQAQQYIQQ 178
Query: 158 ARVSGELTDQGGELT-DQGNNSHPLRVLPDFAQVYTFIGSVFDPNASDHVQKLKKMDPID 216
A + + + + G L + +N+ + P+F ++Y F+ ++F+ N + + L + ID
Sbjct: 179 AVTTAQSSQRNGGLPPNPSSNNGGTTLTPNFPKIYAFLSNLFESNGTSFTEALSDLSMID 238
Query: 217 VETVLLLMRNLSINLTSPDFEDHRRLLS 244
ET+ +LM NL+INL + + D+ + LS
Sbjct: 239 RETMQILMHNLAINLANQQYRDNHQTLS 266
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 146 NNRSNSTDSTPKARVSGELTDQGGELTDQGNNS 178
NN +N+ ++ + + GG+ DQ +++
Sbjct: 333 NNNNNNNNNNNNNNNNNNNNNNGGDFGDQNHSN 365
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 122 AATSWTNNVQTVSLSPASKGPEVANNRS---NSTDSTPKARVSGELTDQGGELTDQGNNS 178
A + +N QT+S K E + + + +ST VSG+ D + NN+
Sbjct: 254 ANQQYRDNHQTLSEQYRMKRDEDEDLNAIMISPRNSTGNINVSGDFYDNNSNNNNNNNNN 313
Query: 179 H 179
+
Sbjct: 314 N 314
>TAIR|locus:2044345 [details] [associations]
symbol:CCA1 "circadian clock associated 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0010243 "response to
organic nitrogen" evidence=IEP] [GO:0048574 "long-day
photoperiodism, flowering" evidence=IGI;RCA] [GO:0007623 "circadian
rhythm" evidence=IEP;IGI;RCA;IMP;TAS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0043496 "regulation of protein
homodimerization activity" evidence=IMP] [GO:0009409 "response to
cold" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042754 "negative regulation of circadian rhythm"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009639 "response to red or far
red light" evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0009737
GO:GO:0005634 GO:GO:0046686 GO:GO:0045892 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0007623 GO:GO:0009651 GO:GO:0009409
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0010243 GO:GO:0043496 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC005310 GO:GO:0048574
EMBL:U28422 EMBL:U79156 EMBL:AY519511 EMBL:BT001096 EMBL:BT001105
IPI:IPI00522826 IPI:IPI00545715 PIR:T02684 RefSeq:NP_850460.1
RefSeq:NP_850461.1 UniGene:At.10956 ProteinModelPortal:P92973
SMR:P92973 IntAct:P92973 STRING:P92973 PRIDE:P92973
EnsemblPlants:AT2G46830.1 GeneID:819296 KEGG:ath:AT2G46830
GeneFarm:1652 TAIR:At2g46830 eggNOG:NOG310744 HOGENOM:HOG000084594
InParanoid:P92973 KO:K12134 OMA:HPEMANE PhylomeDB:P92973
ProtClustDB:CLSN2918288 GO:GO:0042754 Uniprot:P92973
Length = 608
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 24 FDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTAE 61
+ R W+KIE + +KT +QIRSHAQK+F KV+K A+
Sbjct: 42 YGRAWQKIEEHVATKTAVQIRSHAQKFFSKVEKEAEAK 79
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 143 EVANNRSNSTDSTPKARVSGELTDQGGELTDQG 175
E N S + ++R+S +TD ++D+G
Sbjct: 457 EDTNKPQTSESNARRSRISSNITDPWKSVSDEG 489
>TAIR|locus:2167210 [details] [associations]
symbol:RVE1 "REVEILLE 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0007623 "circadian rhythm" evidence=IEP;RCA] [GO:0009734 "auxin
mediated signaling pathway" evidence=IMP] [GO:0009851 "auxin
biosynthetic process" evidence=IMP] [GO:0010600 "regulation of
auxin biosynthetic process" evidence=IMP] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 EMBL:CP002688 GO:GO:0009734 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009851 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010600 IPI:IPI00524365
RefSeq:NP_568344.2 UniGene:At.21718 ProteinModelPortal:F4KGY6
SMR:F4KGY6 EnsemblPlants:AT5G17300.1 GeneID:831595
KEGG:ath:AT5G17300 OMA:TKERERW Uniprot:F4KGY6
Length = 387
Score = 115 (45.5 bits), Expect = 0.00028, P = 0.00028
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 24 FDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGT 59
+ R W++IE +GSKT +QIRSHAQK+F KV + T
Sbjct: 73 YGRAWRRIEEHVGSKTAVQIRSHAQKFFSKVAREAT 108
>TAIR|locus:2169135 [details] [associations]
symbol:RVE2 "REVEILLE 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0007623
"circadian rhythm" evidence=IEP;RCA] [GO:0009845 "seed germination"
evidence=IMP] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 EMBL:CP002688 GO:GO:0009733
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0009845
GO:GO:0009909 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00528444
RefSeq:NP_198542.1 UniGene:At.30502 UniGene:At.68589
ProteinModelPortal:F4K5X6 SMR:F4K5X6 PRIDE:F4K5X6
EnsemblPlants:AT5G37260.1 GeneID:833700 KEGG:ath:AT5G37260
OMA:SSHTEES ArrayExpress:F4K5X6 Uniprot:F4K5X6
Length = 287
Score = 109 (43.4 bits), Expect = 0.00080, P = 0.00080
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 24 FDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKN 57
+ R W++IE +G+KT +QIRSHAQK+F KV ++
Sbjct: 54 YGRAWRRIEEHVGTKTAVQIRSHAQKFFTKVARD 87
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 267 240 0.00093 113 3 11 22 0.45 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 587 (62 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.28u 0.12s 22.40t Elapsed: 00:00:01
Total cpu time: 22.28u 0.12s 22.40t Elapsed: 00:00:01
Start: Fri May 10 09:27:49 2013 End: Fri May 10 09:27:50 2013