Query 024487
Match_columns 267
No_of_seqs 128 out of 1522
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 09:04:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024487.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024487hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfo_A Putative acetylornithin 100.0 1.8E-28 6.1E-33 223.9 20.7 226 2-255 157-390 (433)
2 1vgy_A Succinyl-diaminopimelat 100.0 1.9E-27 6.3E-32 214.7 22.8 219 2-256 116-341 (393)
3 2f7v_A Aectylcitrulline deacet 100.0 8.5E-28 2.9E-32 215.2 18.1 212 11-260 121-338 (369)
4 3isz_A Succinyl-diaminopimelat 100.0 1.2E-26 4.1E-31 207.7 24.4 223 2-260 113-345 (377)
5 3io1_A Aminobenzoyl-glutamate 100.0 4.7E-27 1.6E-31 215.5 19.5 209 2-251 163-383 (445)
6 3tx8_A Succinyl-diaminopimelat 99.9 2E-27 7E-32 212.6 15.7 222 2-260 116-340 (369)
7 1xmb_A IAA-amino acid hydrolas 99.9 1.7E-26 5.9E-31 210.0 19.2 210 2-251 130-354 (418)
8 1cg2_A Carboxypeptidase G2; me 99.9 5.6E-27 1.9E-31 211.5 14.2 212 2-255 132-350 (393)
9 3ram_A HMRA protein; two-domai 99.9 1.5E-26 5.3E-31 208.9 16.4 220 2-261 107-335 (394)
10 3dlj_A Beta-Ala-His dipeptidas 99.9 2.4E-25 8.3E-30 206.1 23.4 235 2-262 156-451 (485)
11 1ysj_A Protein YXEP; M20 famil 99.9 3.2E-26 1.1E-30 207.4 16.7 212 2-251 136-356 (404)
12 3pfe_A Succinyl-diaminopimelat 99.9 7.8E-26 2.7E-30 208.8 19.4 227 2-254 143-428 (472)
13 3rza_A Tripeptidase; phosphory 99.9 4.4E-26 1.5E-30 205.9 17.4 210 2-255 142-354 (396)
14 3ct9_A Acetylornithine deacety 99.9 2E-26 6.8E-31 205.5 14.7 206 2-260 118-324 (356)
15 3gb0_A Peptidase T; NP_980509. 99.9 6E-26 2E-30 203.3 17.3 212 2-257 121-336 (373)
16 2zog_A Cytosolic non-specific 99.9 8.1E-25 2.8E-29 202.2 21.5 232 2-256 149-436 (479)
17 2pok_A Peptidase, M20/M25/M40 99.9 4.2E-25 1.5E-29 204.3 16.0 232 2-260 160-449 (481)
18 2rb7_A Peptidase, M20/M25/M40 99.9 2.6E-25 8.9E-30 198.8 12.5 203 2-260 113-328 (364)
19 3ife_A Peptidase T; metallopep 99.9 3E-25 1E-29 202.8 12.0 212 2-258 179-396 (434)
20 3n5f_A L-carbamoylase, N-carba 99.9 1.2E-23 4.2E-28 190.6 17.0 219 2-260 103-375 (408)
21 1z2l_A Allantoate amidohydrola 99.9 6.6E-24 2.3E-28 193.1 14.1 223 2-260 107-379 (423)
22 3khx_A Putative dipeptidase sa 99.9 6.7E-24 2.3E-28 196.7 12.9 221 2-258 151-453 (492)
23 2v8h_A Beta-alanine synthase; 99.9 4.3E-23 1.5E-27 190.5 16.9 221 2-260 137-415 (474)
24 2qyv_A XAA-His dipeptidase; YP 99.9 5.7E-23 1.9E-27 190.3 17.2 206 4-252 128-442 (487)
25 1fno_A Peptidase T; metallo pe 99.9 1.3E-22 4.3E-27 184.4 14.6 207 2-254 153-366 (417)
26 3mru_A Aminoacyl-histidine dip 99.9 4.2E-22 1.5E-26 184.5 15.3 222 9-260 135-457 (490)
27 1lfw_A PEPV; hydrolase, dipept 99.9 1.7E-21 6E-26 179.4 16.2 221 2-260 132-431 (470)
28 1q7l_A Aminoacylase-1; catalys 98.3 4.7E-08 1.6E-12 79.4 -0.3 69 2-72 126-198 (198)
29 4h2k_A Succinyl-diaminopimelat 97.9 4.9E-06 1.7E-10 70.6 3.5 64 2-67 116-184 (269)
30 3t68_A Succinyl-diaminopimelat 97.8 1.8E-05 6.1E-10 67.1 4.5 64 2-67 116-184 (268)
31 2fvg_A Endoglucanase; TM1049, 97.4 2.3E-05 7.8E-10 68.7 0.2 62 10-92 184-245 (340)
32 1rtq_A Bacterial leucyl aminop 95.3 0.0067 2.3E-07 51.9 2.3 52 2-56 130-181 (299)
33 2wyr_A Cobalt-activated peptid 95.2 0.011 3.6E-07 51.3 3.2 45 3-57 187-231 (332)
34 2gre_A Deblocking aminopeptida 94.8 0.0054 1.8E-07 53.7 0.3 46 2-57 199-244 (349)
35 1tkj_A Aminopeptidase, SGAP; d 94.2 0.023 7.7E-07 48.2 2.7 52 2-56 110-162 (284)
36 1vhe_A Aminopeptidase/glucanas 93.9 0.027 9.1E-07 49.7 2.6 46 2-57 197-242 (373)
37 1q7l_B Aminoacylase-1; catalys 93.4 0.097 3.3E-06 35.8 4.3 44 217-261 1-47 (88)
38 1y0y_A FRV operon protein FRVX 92.8 0.051 1.7E-06 47.4 2.6 39 11-57 200-238 (353)
39 3iib_A Peptidase M28; YP_92679 90.6 0.18 6E-06 45.6 3.7 36 2-40 282-317 (444)
40 3tc8_A Leucine aminopeptidase; 87.8 0.55 1.9E-05 40.1 4.7 51 2-54 140-200 (309)
41 3gux_A Putative Zn-dependent e 86.7 0.64 2.2E-05 39.9 4.5 51 2-54 142-203 (314)
42 1ylo_A Hypothetical protein SF 83.5 0.86 2.9E-05 39.2 3.8 39 11-57 189-227 (348)
43 3kl9_A PEPA, glutamyl aminopep 83.2 0.72 2.5E-05 40.3 3.2 38 10-55 201-238 (355)
44 2vpu_A TET3, 354AA long hypoth 81.0 0.89 3E-05 39.7 2.9 44 3-55 196-239 (354)
45 1vho_A Endoglucanase; structur 79.6 0.95 3.2E-05 39.0 2.6 38 11-56 192-229 (346)
46 2afw_A Glutaminyl-peptide cycl 78.1 1 3.5E-05 38.7 2.3 28 9-39 155-190 (329)
47 2ek8_A Aminopeptidase; metallo 75.9 1.4 4.9E-05 39.2 2.7 49 2-55 253-302 (421)
48 3isx_A Endoglucanase; TM1050, 74.4 1.2 4.1E-05 38.7 1.8 43 3-55 191-233 (343)
49 4fuu_A Leucine aminopeptidase; 72.5 5.5 0.00019 33.7 5.5 51 2-54 140-201 (309)
50 2jvf_A De novo protein M7; tet 67.9 16 0.00056 23.6 5.6 31 143-173 15-45 (96)
51 3kas_A Transferrin receptor pr 65.8 2.9 0.0001 39.4 2.5 31 7-40 320-350 (640)
52 3cpx_A Aminopeptidase, M42 fam 65.5 2.8 9.6E-05 35.8 2.2 39 15-57 183-221 (321)
53 4f9u_A CG32412; alpha/beta hyd 64.8 5 0.00017 33.9 3.6 33 8-40 127-164 (312)
54 3fed_A Glutamate carboxypeptid 62.9 3.8 0.00013 39.1 2.7 31 7-40 365-395 (707)
55 3pb6_X Glutaminyl-peptide cycl 60.4 4.2 0.00015 34.9 2.4 28 9-39 159-194 (330)
56 4fai_A CG5976, isoform B; alph 57.4 8.7 0.0003 32.9 3.8 32 8-39 151-187 (330)
57 2wzn_A TET3, 354AA long hypoth 52.1 0.088 3E-06 44.4 -9.8 82 11-98 115-197 (354)
58 3t68_A Succinyl-diaminopimelat 49.6 33 0.0011 27.9 6.1 40 216-255 190-229 (268)
59 4h2k_A Succinyl-diaminopimelat 34.0 52 0.0018 26.7 4.9 40 216-255 190-229 (269)
60 2ijz_A Probable M18-family ami 33.0 46 0.0016 29.5 4.6 30 2-36 245-274 (428)
61 3kz5_E Protein SOPB; partition 28.5 51 0.0017 19.8 2.7 28 143-174 21-48 (52)
62 2glj_A Probable M18-family ami 25.4 31 0.001 31.0 2.1 25 2-27 271-295 (461)
63 2qyv_A XAA-His dipeptidase; YP 21.9 1E+02 0.0034 27.4 4.8 43 123-172 345-387 (487)
64 2kl8_A OR15; structural genomi 21.8 1.6E+02 0.0054 18.5 5.6 25 148-173 2-26 (85)
65 2glf_A Probable M18-family ami 21.3 35 0.0012 30.6 1.6 25 2-28 259-283 (450)
No 1
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.96 E-value=1.8e-28 Score=223.91 Aligned_cols=226 Identities=12% Similarity=0.096 Sum_probs=179.1
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCCCCeeeeecceEEEEEEEEecCCCc
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~i~~g~~G~~~~~i~v~G~~~Hs 81 (267)
+.|++.+.+++++|+|+|++|||.|+ .|+..+++++ +++|++|+.||+...+.++++|..+++|+++|+++|+
T Consensus 157 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~----~~~d~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 229 (433)
T 3pfo_A 157 DAIRTAGYAPDARVHVQTVTEEESTG---NGALSTLMRG----YRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHV 229 (433)
T ss_dssp HHHHHTTEEESSCEEEEEESCTTTTC---HHHHHHHHTT----CCCSEEEECCCCSSCEEEEECEEEEEEEEEECCCCBG
T ss_pred HHHHHcCCCCCccEEEEEEecCccCC---hhHHHHHhcC----CCCCEEEEeCCCCCceEEecceEEEEEEEEEcCCCcc
Confidence 56777777789999999999999987 7999999765 3579999999988789999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhhccC-----CCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCC
Q 024487 82 GLPHKAINPLELAMEALKVIQTRFYKD-----FPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPF 156 (267)
Q Consensus 82 s~p~~g~nai~~~~~~i~~l~~~~~~~-----~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~ 156 (267)
|.|+.|+||+..+++++..|+.+..+. ..+. ...+..+.+++++.|+ +|...|+||++|++.+++|+.|+
T Consensus 230 ~~p~~g~nAi~~~~~~i~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~~~~ 304 (433)
T 3pfo_A 230 AYSETGTSAILSAMHLIRAFEEYTKELNAQAVRDPW----FGQVKNPIKFNVGIIK-GGDWASSTAAWCELDCRLGLLTG 304 (433)
T ss_dssp GGGGGSCCHHHHHHHHHHHHHHHHHHHHHHGGGCTT----TTTSSSCSCEEEEEEE-ECSCTTBCCCEEEEEEEEEECTT
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHHHhhhccccCcc----ccccCCCceEEeeeEE-CCCCCcccCcEEEEEEEEecCCC
Confidence 999999999999999999998763211 0110 0112235689999999 89999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEec-ccCCcccCCCCCHHHHHHHHHHHHHhCCCC
Q 024487 157 YNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFD-EATNGVACNLDSRGFHVLCKATEEVVGHVN 235 (267)
Q Consensus 157 ~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~ 235 (267)
++.+++.+.|++.+++..+... ...+.++++++. ..+|++.++.++++++.+.+++++++|.++
T Consensus 305 ~~~~~~~~~i~~~~~~~~~~~~---------------~~~~~~~~v~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~ 369 (433)
T 3pfo_A 305 DTPQEAMRGIEKCLADAQATDS---------------FLSENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPL 369 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCH---------------HHHHSCCEEEEEEEEECCEECCTTCHHHHHHHHHHHHHHSSCC
T ss_pred CCHHHHHHHHHHHHHHHhhhCc---------------ccccCCeEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999988754311 000123455554 347888888899999999999999889844
Q ss_pred -ccccCCCcchHHHHHH-hcce
Q 024487 236 -PYSITGTLPLIRELQV-RYML 255 (267)
Q Consensus 236 -~~~~~g~~~~~~~~~~-~g~~ 255 (267)
...++|++ +++++.+ .|++
T Consensus 370 ~~~~~~g~~-D~~~~~~~~giP 390 (433)
T 3pfo_A 370 DARLSTAVN-DTRYYSVDYGIP 390 (433)
T ss_dssp CEEEESSCC-THHHHHHTTCCC
T ss_pred ceeeeeeec-cHHHHHhhCCCC
Confidence 34566666 5666665 3544
No 2
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.96 E-value=1.9e-27 Score=214.68 Aligned_cols=219 Identities=18% Similarity=0.162 Sum_probs=168.5
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCCC-----CeeeeecceEEEEEEEEe
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGMIPWKLHVTG 76 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-----~i~~g~~G~~~~~i~v~G 76 (267)
+.|++.+.+++++|+|+|++|||+++. .|++.+++.....+.++|++++.|++.. .+..+.+|..+++|+++|
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~Ga~~~~~~~~~~~~~~d~~i~~e~~~~~~~g~~i~~g~~G~~~~~i~v~G 193 (393)
T 1vgy_A 116 ERFVAKHPNHQGSIALLITSDEEGDAL--DGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKG 193 (393)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCEEEEEECCCCBSSSTTSEEECEECEEEEEEEEEEC
T ss_pred HHHHHhcCCCCCcEEEEEEeccccCCc--CCHHHHHHHHHhcCcCCCEEEEeCCCCcccCCceeEEeeeeEEEEEEEEEc
Confidence 456666667899999999999998631 6899988765444456789999998743 256799999999999999
Q ss_pred cCCCcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCC-ccceeCCeeEEEEEEEeCC
Q 024487 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (267)
Q Consensus 77 ~~~Hss~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~-~~n~ip~~a~~~~diR~~p 155 (267)
+++|++.|+.|+||+..+++++..|+....+.. ..+..+++++++.|+ +|. ..|+||++|++.+|+|+.|
T Consensus 194 ~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~--------~~~~~~~~~~v~~i~-gG~~~~NviP~~a~~~~diR~~~ 264 (393)
T 1vgy_A 194 KQGHIAYPHLAINPVHTFAPALLELTQEVWDEG--------NEYFPPTSFQISNIN-GGTGATNVIPGELNVKFNFRFST 264 (393)
T ss_dssp BCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCC--------CSSCCCCEEEEEEEE-ECCSCTTEECSEEEEEEEEEECT
T ss_pred cCcccCCCccCCCHHHHHHHHHHHhhccccccc--------ccccCCCeEEEeeEc-CCCCCCcccCCeEEEEEEEecCC
Confidence 999999999999999999999999987421111 112235789999999 776 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC
Q 024487 156 FYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN 235 (267)
Q Consensus 156 ~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~ 235 (267)
.++.+++.++|++.++.. +.++++++....+|+..+ ++++++.+.+++++++|..+
T Consensus 265 ~~~~~~i~~~i~~~~~~~-----------------------~~~~~~~~~~~~~p~~~~-~~~l~~~~~~~~~~~~g~~~ 320 (393)
T 1vgy_A 265 ESTEAGLKQRVHAILDKH-----------------------GVQYDLQWSCSGQPFLTQ-AGKLTDVARAAIAETCGIEA 320 (393)
T ss_dssp TSCHHHHHHHHHHHHHHT-----------------------TCCEEEEEEEEECCEECC-SSHHHHHHHHHHHHHHSSCC
T ss_pred CCCHHHHHHHHHHHHHHh-----------------------CCCeEEEEecCCCcccCC-CcHHHHHHHHHHHHHcCCCc
Confidence 999999999999887642 223445543334555444 78999999999999889854
Q ss_pred cc-ccCCCcchHHHHHHhccee
Q 024487 236 PY-SITGTLPLIRELQVRYMLF 256 (267)
Q Consensus 236 ~~-~~~g~~~~~~~~~~~g~~f 256 (267)
.. .++|++ +++++...|+++
T Consensus 321 ~~~~~~g~~-D~~~~~~~~~P~ 341 (393)
T 1vgy_A 321 ELSTTGGTS-DGRFIKAMAQEL 341 (393)
T ss_dssp EEECCSCCC-THHHHGGGEEEE
T ss_pred eEecCCccc-hHHHHHhCCCCE
Confidence 43 455555 677777656554
No 3
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.95 E-value=8.5e-28 Score=215.22 Aligned_cols=212 Identities=11% Similarity=0.052 Sum_probs=162.1
Q ss_pred CCccEEEEEEecccc-CCCCcccHHHHHHccccCcCCCCcEEEecCCCCCeeeeecceEEEEEEEEecCCCcCCCC-CCC
Q 024487 11 LKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPH-KAI 88 (267)
Q Consensus 11 ~~~~I~li~~~dEE~-g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~i~~g~~G~~~~~i~v~G~~~Hss~p~-~g~ 88 (267)
++++|+|+|++|||+ |+ .|++++++++. ++|++++.|++.+.+.++++|..+++|+++|+++|+|.|+ .|+
T Consensus 121 ~~~~v~~~~~~~EE~~g~---~G~~~~~~~~~----~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~ 193 (369)
T 2f7v_A 121 GDGDAAFLFSSDEEANDP---RCIAAFLARGL----PYDAVLVAEPTMSEAVLAHRGISSVLMRFAGRAGHASGKQDPAA 193 (369)
T ss_dssp CCCCEEEEEESCTTSSSC---CHHHHHHTTCC----CCSEEEECCCSTTCBBCCBCCEEEEEEEEECCCC------CTTS
T ss_pred CCCCEEEEEEeCcccCCC---cCHHHHHhcCC----CCCEEEECCCCCCcceeecCceEEEEEEEeeeCcccCCCCcCCC
Confidence 789999999999999 76 79999997653 5789999999888889999999999999999999999999 899
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCCCHHHHHHHHHH
Q 024487 89 NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQE 168 (267)
Q Consensus 89 nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~~~~~v~~~l~~ 168 (267)
||+..|++++..|+.+..+ ..... ....+ . ++++++.|+ +|...|+||++|++.+|+|+.|+++.+++.++|++
T Consensus 194 nAi~~~~~~i~~l~~~~~~-~~~~~--~~~~~-~-~~~~vg~i~-gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~ 267 (369)
T 2f7v_A 194 SALHQAMRWGGKALDHVES-LAHAR--FGGLT-G-LRFNIGRVD-GGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAG 267 (369)
T ss_dssp CHHHHHHHHHHHHHHHHHH-TTTCE--ETTEE-S-CEEEEEEEE-ECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhh-hcccc--cCccc-C-CceEEEEee-cCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHH
Confidence 9999999999999876322 11000 00011 1 689999999 89999999999999999999999998888887776
Q ss_pred HHHHhhhhhcccccCCCcccccCCCCCcceEEEEEec-ccCCcccCCCCCHHHHHHHHHHHHHhCCCCccccCCCcchHH
Q 024487 169 YVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFD-EATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLIR 247 (267)
Q Consensus 169 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~~~~~~g~~~~~~ 247 (267)
.++.. +.+++++.. ..+||+.+++ +++++.+++++++++|..+...++|++ +++
T Consensus 268 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~a~~~~~g~~~~~~~~g~~-D~~ 322 (369)
T 2f7v_A 268 FADPA-----------------------AAHFEETFRGPSLPSGDIAR-AEERRLAARDVADALDLPIGNAVDFWT-EAS 322 (369)
T ss_dssp TCSSC-----------------------CSEEEEEEEECCBSCSSHHH-HHHHHHHHHHHHHHTTCCBCCCBSSCC-THH
T ss_pred HHHHh-----------------------cCceEEEeccCCCCccCCCC-CHHHHHHHHHHHHhhCCCCCccccccC-cHH
Confidence 65421 245566654 3578888777 899999999999988874444456666 577
Q ss_pred HHHHhc---ceeeecC
Q 024487 248 ELQVRY---MLFSMSD 260 (267)
Q Consensus 248 ~~~~~g---~~f~~~~ 260 (267)
.+.+.| +.|+|++
T Consensus 323 ~~~~~g~p~v~~Gpg~ 338 (369)
T 2f7v_A 323 LFSAGGYTALVYGPGD 338 (369)
T ss_dssp HHHHTTCCEEECCSSC
T ss_pred HHhhCCCCEEEECCCC
Confidence 777764 4566643
No 4
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.95 E-value=1.2e-26 Score=207.73 Aligned_cols=223 Identities=17% Similarity=0.145 Sum_probs=165.2
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCCCC-----eeeeecceEEEEEEEEe
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGMIPWKLHVTG 76 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~-----i~~g~~G~~~~~i~v~G 76 (267)
+.|++.+.+++++|+|+|++|||.++. .|++.+++....+..++|++++.|++... +..|.+|..+++|+++|
T Consensus 113 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~G~~~~~~~~~~~~~~~d~~~~~e~~~~~~~g~~i~~g~~g~~~~~i~~~G 190 (377)
T 3isz_A 113 EEYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG 190 (377)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCS--SSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEEEEECEEEEEEEEEEC
T ss_pred HHHHHhCCCCCceEEEEEEcccccCcc--ccHHHHHHHHHhcCCCCCEEEEcCCCCcccCCceEEEEcceEEEEEEEEEc
Confidence 345566667899999999999998752 48999887543344567999999986532 67899999999999999
Q ss_pred cCCCcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCC-ccceeCCeeEEEEEEEeCC
Q 024487 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (267)
Q Consensus 77 ~~~Hss~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~-~~n~ip~~a~~~~diR~~p 155 (267)
+++|+|.|+.|+||+..+++++..|++...+.. ..+..+++++++.++ +|. ..|+||++|++.+|+|+.+
T Consensus 191 ~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~--------~~~~~~~~~~v~~i~-gg~~~~nvip~~~~~~~diR~~~ 261 (377)
T 3isz_A 191 IQGHVAYPHLAENPIHKAALFLQELTTYQWDKG--------NEFFPPTSLQIANIH-AGTGSNNVIPAELYIQFNLRYCT 261 (377)
T ss_dssp C-------CGGGCHHHHHHHHHHHHHHCCCCCC--------CSSSCCCEEEEEEEE-ECCSCSSCCCSEEEEEEEEEECT
T ss_pred cccccCCCccCcCHHHHHHHHHHHHHhcccccc--------ccccCCceeEEEEEE-CCCCCCcccCCceEEEEEEecCC
Confidence 999999999999999999999999987521110 122346889999999 776 7999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC
Q 024487 156 FYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN 235 (267)
Q Consensus 156 ~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~ 235 (267)
+++.+++.+++++.++.. +.++++++....+|+. ..++++++.+.+++++++|.++
T Consensus 262 ~~~~~~i~~~i~~~~~~~-----------------------g~~~~i~~~~~~~p~~-~~~~~l~~~l~~a~~~~~g~~~ 317 (377)
T 3isz_A 262 EVTDEIIKQKVAEMLEKH-----------------------NLKYRIEWNLSGKPFL-TKPGKLLDSITSAIEETIGITP 317 (377)
T ss_dssp TSCHHHHHHHHHHHHHHT-----------------------TCCEEEEEEECCCCEE-CCTTHHHHHHHHHHHHHHSCCC
T ss_pred CCCHHHHHHHHHHHHHHc-----------------------CCCeEEEEEecCCCCc-CCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999888887742 3445565544445554 4467999999999999889855
Q ss_pred cc-ccCCCcchHHHHHHhc---ceeeecC
Q 024487 236 PY-SITGTLPLIRELQVRY---MLFSMSD 260 (267)
Q Consensus 236 ~~-~~~g~~~~~~~~~~~g---~~f~~~~ 260 (267)
.. .++|++ +++++...| +.|+|+.
T Consensus 318 ~~~~~~g~t-Da~~~~~~g~~~v~~Gp~~ 345 (377)
T 3isz_A 318 KAETGGGTS-DGRFIALMGAEVVEFGPLN 345 (377)
T ss_dssp EEEECSSCC-SHHHHHTTTCEEEECCSBC
T ss_pred eeeccCccc-HHHHHHHcCCCEEEECCCC
Confidence 44 445555 577777764 4676654
No 5
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=99.95 E-value=4.7e-27 Score=215.45 Aligned_cols=209 Identities=17% Similarity=0.163 Sum_probs=163.3
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC----CCeeeeecc---eEEEEEEE
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD----KQPCIGTGG---MIPWKLHV 74 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~----~~i~~g~~G---~~~~~i~v 74 (267)
+.|++.+.+++++|+|+|++|||++ .|++.|++++.+++ +|++|..|+++ +.+.++.+| ..+++|++
T Consensus 163 ~~L~~~~~~~~g~v~l~f~p~EE~~----~Ga~~~i~~g~~~~--~d~~~~~h~~~~~~~g~i~~~~~g~~a~~~~~i~v 236 (445)
T 3io1_A 163 HVLKQYAAQLNGVIKLIFQPAEEGT----RGARAMVAAGVVDD--VDYFTAIHIGTGVPAGTVVCGGDNFMATTKFDVQF 236 (445)
T ss_dssp HHHHHTGGGCCSEEEEEEESCTTTT----CHHHHHHHTTTTTT--CSEEEEEEEEEEEETTBEESCCCCBCEEEEEEEEE
T ss_pred HHHHhCcCcCCceEEEEEecccccc----chHHHHHHcCCccc--cceeEEEeccCCCCCCeEEEecCCeeEEEEEEEEE
Confidence 5677877789999999999999954 69999999887764 68999998753 556665544 57999999
Q ss_pred EecCCCc-CCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEe
Q 024487 75 TGKLFHS-GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (267)
Q Consensus 75 ~G~~~Hs-s~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~ 153 (267)
+|+++|+ +.|+.|+||+..+++++..|+.+ .+... +.++++++.|+ +|...|+||++|++.+++|+
T Consensus 237 ~Gk~~HaGs~P~~g~nAi~~aa~~i~~l~~l-~~~~~-----------~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~ 303 (445)
T 3io1_A 237 SGVAAHAGGKPEDGRNALLAAAQAALGLHAI-PPHSA-----------GASRVNVGVMQ-AGTGRNVVPSSALLKVETRG 303 (445)
T ss_dssp ECCCSSTTCCGGGCCCHHHHHHHHHHHHHTC-CCBTT-----------BCEEEEEEEEE-ECSCTTSCCCEEEEEEEEEE
T ss_pred EeecCCCCCCCcCCcCHHHHHHHHHHHHHHH-HhhcC-----------CCeEEEEEEEe-cCCCCceeCCeEEEEEEEec
Confidence 9999998 69999999999999999999875 22221 24789999999 89999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCC
Q 024487 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH 233 (267)
Q Consensus 154 ~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~ 233 (267)
.+.++.+++.++|++.++..... +++++++++...+|+. ..+.++++.+.+++++++|.
T Consensus 304 ~~~~~~~~i~~~i~~~~~~~a~~-------------------~g~~~~i~~~~~~~~~--~~d~~l~~~~~~a~~~~~g~ 362 (445)
T 3io1_A 304 ESEAINQYVFERAQHVVAGAAAM-------------------YEARYELRMMGAATAS--APSPAWVDYLREQAARVPGV 362 (445)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHH-------------------TTCEEEEEEEEEECCC--CCCHHHHHHHHHHHHHSTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH-------------------hCCeEEEEEecCCCCc--CCCHHHHHHHHHHHHHhcCC
Confidence 98777777777777777665443 2566777766666664 44678999999999998776
Q ss_pred CC---cc-ccCCCcchHHHHHH
Q 024487 234 VN---PY-SITGTLPLIRELQV 251 (267)
Q Consensus 234 ~~---~~-~~~g~~~~~~~~~~ 251 (267)
.+ .. .++|+++ ++++.+
T Consensus 363 ~~v~~~~~~~~g~~D-~~~~~~ 383 (445)
T 3io1_A 363 QQAVDRIAAPAGSED-ATLMMA 383 (445)
T ss_dssp CBCBSSCCCCCBCCT-HHHHHH
T ss_pred ccceecCCCCccHHH-HHHHHH
Confidence 43 22 3466664 444443
No 6
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.95 E-value=2e-27 Score=212.60 Aligned_cols=222 Identities=14% Similarity=0.096 Sum_probs=169.0
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCCCCeeeeecceEEEEEEEEecCCCc
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~i~~g~~G~~~~~i~v~G~~~Hs 81 (267)
+.|++. ..++++|+|+|++|||+|+.. .|++++++.+ ++.+++|+++..||+.+.+.++++|..+++|+++|+++|+
T Consensus 116 ~~l~~~-~~~~~~v~~~~~~~EE~g~~~-~G~~~~~~~~-~~~~~~~~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 192 (369)
T 3tx8_A 116 ATLATS-TELKHDLTLIAYECEEVADHL-NGLGHIRDEH-PEWLAADLALLGEPTGGWIEAGCQGNLRIKVTAHGVRAHS 192 (369)
T ss_dssp HHHTSC-TTCCSEEEEEEECCCSSCTTS-CHHHHHHHHC-GGGGCCSEEEECCCCTTCEEESBCEEEEEEEEEECBCCBT
T ss_pred HHHHhh-cCCCccEEEEEEeccccCccc-ccHHHHHHhc-ccccCCCEEEEeCCCCCceeeecceEEEEEEEEeeecccc
Confidence 456554 468999999999999998521 3899999876 3446789999999998899999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCCCHHH
Q 024487 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTD 161 (267)
Q Consensus 82 s~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~~~~~ 161 (267)
|.|+.|+||+..+++++..|+++..+.... .++....+++++.|+ +|...|+||++|++.+|+|+.|+++.++
T Consensus 193 ~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~------~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~~~ 265 (369)
T 3tx8_A 193 ARSWLGDNAMHKLSPIISKVAAYKAAEVNI------DGLTYREGLNIVFCE-SGVANNVIPDLAWMNLNFRFAPNRDLNE 265 (369)
T ss_dssp TSGGGSBCTGGGGHHHHHHHHHCCCCEEEE------TTEEEECEEEEEEEE-ECSBTTBCCSEEEEEEEEEECTTSCHHH
T ss_pred CCCCcCcCHHHHHHHHHHHHHhhccccccc------CCcccCceEEEEEEE-CCCCCccccCcEEEEEEEecCCCCCHHH
Confidence 999999999999999999998753211100 011114689999999 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCCccccCC
Q 024487 162 VMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITG 241 (267)
Q Consensus 162 v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~~~~~~g 241 (267)
+.+.|++.+++.. . ++.+++++ ...+++..+.++++++.+.+++ |..++...+|
T Consensus 266 v~~~i~~~~~~~~-~-------------------~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~g 319 (369)
T 3tx8_A 266 AIEHVVETLELDG-Q-------------------DGIEWAVE--DGAGGALPGLGQQVTSGLIDAV----GREKIRAKFG 319 (369)
T ss_dssp HHHHHHHHTTTTT-S-------------------TTEEEEEE--EEECCBCCCTTSHHHHHHHHHH----CGGGEEECCS
T ss_pred HHHHHHHHHHhcc-c-------------------CCeEEEEE--ecCCCCCCCCCCHHHHHHHHHc----CCCCCccccc
Confidence 9888888876543 1 14544443 3345555667889988887763 5422345556
Q ss_pred CcchHHHHHHh---cceeeecC
Q 024487 242 TLPLIRELQVR---YMLFSMSD 260 (267)
Q Consensus 242 ~~~~~~~~~~~---g~~f~~~~ 260 (267)
++ +++++.+. ++.|+|++
T Consensus 320 gt-D~~~~~~~giP~~~~Gpg~ 340 (369)
T 3tx8_A 320 WT-DVSRFSAMGIPALNFGAGD 340 (369)
T ss_dssp CC-THHHHHTTTCCEEEECSSC
T ss_pred cc-chHHHhhCCCCEEEECCCC
Confidence 66 67777776 45677764
No 7
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.95 E-value=1.7e-26 Score=210.03 Aligned_cols=210 Identities=18% Similarity=0.273 Sum_probs=148.2
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEec-----CCCC---CeeeeecceEEEEEE
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWID-----TADK---QPCIGTGGMIPWKLH 73 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e-----~~~~---~i~~g~~G~~~~~i~ 73 (267)
+.|++.+.+++++|+|+|++||| |+ .|++++++++.+++ +|+++..| +++. .+..+++|..+++|+
T Consensus 130 ~~l~~~~~~~~~~v~~~~~~~EE-g~---~G~~~~~~~g~~~~--~d~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~ 203 (418)
T 1xmb_A 130 KILHEHRHHLQGTVVLIFQPAEE-GL---SGAKKMREEGALKN--VEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAV 203 (418)
T ss_dssp HHHHHTGGGCSSEEEEEEECCTT-TT---CHHHHHHHTTTTTT--EEEEEEEEEEEEEETTCEEECSEEEECEEEEEEEE
T ss_pred HHHHhccccCCceEEEEEecccc-cc---ccHHHHHHcCCcCC--CCEEEEEecCCCCCCceeEeeeccccccceeEEEE
Confidence 56778777789999999999999 76 79999998875543 57888754 3332 335688999999999
Q ss_pred EEecCCCcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEe
Q 024487 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (267)
Q Consensus 74 v~G~~~Hss~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~ 153 (267)
++|+++|+|.|+.|+||+..|++++..|+.+..+..++ ...++++++.|+ ||...|+||++|++.+|+|+
T Consensus 204 v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~---------~~~~t~~vg~i~-gG~~~NvIP~~a~~~~diR~ 273 (418)
T 1xmb_A 204 ITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDP---------LDSKVVTVSKVN-GGNAFNVIPDSITIGGTLRA 273 (418)
T ss_dssp EEEC---------CCHHHHHHHHHHHHHHTTCBCCSSG---------GGCEEEEEEEEC---------CCEEEEEEEEEE
T ss_pred EEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCC---------CCCcEEEEEEEE-ecCcCCcCCCeEEEEEEEcc
Confidence 99999999999999999999999999998753222111 124689999999 99999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEeccc----CCcccCCCCCHHHHHHHHHHHH
Q 024487 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEA----TNGVACNLDSRGFHVLCKATEE 229 (267)
Q Consensus 154 ~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~v~~l~~a~~~ 229 (267)
.| +.+++.++|++.++..... ++.++++++... +|+ ++.++++++.+++++++
T Consensus 274 ~~--~~~~i~~~i~~~~~~~a~~-------------------~g~~~~~~~~~~~~~p~~~--~~~d~~l~~~~~~~~~~ 330 (418)
T 1xmb_A 274 FT--GFTQLQQRVKEVITKQAAV-------------------HRCNASVNLTPNGREPMPP--TVNNKDLYKQFKKVVRD 330 (418)
T ss_dssp SS--CHHHHHHHHHHHHHHHHHH-------------------TTEEEEEESSGGGCCCBCC--EEECHHHHHHHHHHHHH
T ss_pred Cc--HHHHHHHHHHHHHHHHHHH-------------------hCCeEEEEEccCCcccCCC--ccCCHHHHHHHHHHHHH
Confidence 98 8899999999888776443 256677776555 444 34678999999999999
Q ss_pred HhCCCC---ccccCCCcchHHHHHH
Q 024487 230 VVGHVN---PYSITGTLPLIRELQV 251 (267)
Q Consensus 230 ~~g~~~---~~~~~g~~~~~~~~~~ 251 (267)
++|..+ +..++|++ +++++.+
T Consensus 331 ~~g~~~~~~~~~~~g~t-D~~~~~~ 354 (418)
T 1xmb_A 331 LLGQEAFVEAAPVMGSE-DFSYFAE 354 (418)
T ss_dssp HHCGGGEEECCCBCCCC-THHHHHT
T ss_pred hcCCcceeccCCCCCcc-hHHHHHH
Confidence 888753 45666777 4555543
No 8
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.94 E-value=5.6e-27 Score=211.53 Aligned_cols=212 Identities=17% Similarity=0.165 Sum_probs=166.8
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCC---CCCeeeeecceEEEEEEEEecC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA---DKQPCIGTGGMIPWKLHVTGKL 78 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~---~~~i~~g~~G~~~~~i~v~G~~ 78 (267)
+.|++.+.+++++|+|+|+++||+|+ .|++.+++++. .++|++|+.|++ .+.+..+++|..+++|+++|++
T Consensus 132 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~~---~~~d~~i~~e~~~~~~~~i~~~~~G~~~~~i~v~G~~ 205 (393)
T 1cg2_A 132 KLLKEYGVRDYGTITVLFNTDEEKGS---FGSRDLIQEEA---KLADYVLSFEPTSAGDEKLSLGTSGIAYVQVNITGKA 205 (393)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTTHHHHHHHH---HHCSEEEECCCEETTSCEEESEECEEEEEEEEEECBC
T ss_pred HHHHhcCCCCCCCEEEEEEcccccCC---ccHHHHHHHHh---hcCCEEEEeCCCCCCCCcEEEeeeeeEEEEEEEEeee
Confidence 56777777788899999999999987 79999997642 246899999987 3568889999999999999999
Q ss_pred CCcC-CCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCC
Q 024487 79 FHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFY 157 (267)
Q Consensus 79 ~Hss-~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~ 157 (267)
+|+| .|+.|+||+..+++++..|+.+. + +. ...+++++.|+ +|...|+||++|++.+++|+.|.+
T Consensus 206 ~Hag~~p~~g~nAi~~~~~~i~~l~~~~-~---~~---------~~~~~~v~~i~-gG~~~NvIP~~a~~~~~iR~~~~~ 271 (393)
T 1cg2_A 206 SHAGAAPELGVNALVEASDLVLRTMNID-D---KA---------KNLRFNWTIAK-AGNVSNIIPASATLNADVRYARNE 271 (393)
T ss_dssp EETTSCGGGSBCHHHHHHHHHHHHGGGC-B---TT---------TTEEEEEEEEE-ECSSTTEECSEEEEEEEEEESSHH
T ss_pred cccCCCcccCcCHHHHHHHHHHHHHhhh-C---cc---------cCceEEEEEEe-CCCCCCEECcccEEEEEEeeCChh
Confidence 9996 79999999999999999987652 1 11 24789999999 999999999999999999999877
Q ss_pred CHHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCC-CCCHHHHHHHHHHHHHhCCCCc
Q 024487 158 NVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACN-LDSRGFHVLCKATEEVVGHVNP 236 (267)
Q Consensus 158 ~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~v~~l~~a~~~~~g~~~~ 236 (267)
+.+++.++|++.++.. ...++++++++...+|++.++ .++++++.+++++++ +|.++.
T Consensus 272 ~~~~i~~~i~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~~ 330 (393)
T 1cg2_A 272 DFDAAMKTLEERAQQK--------------------KLPEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKE-AGGTLG 330 (393)
T ss_dssp HHHHHHHHHHHHHTSC--------------------SSTTCEEEEEEEECSCCEECHHHHHHHHHHHHHHHHH-TTCCCE
T ss_pred hHHHHHHHHHHHHhcc--------------------cCCCcEEEEEeccccCCccCCcchHHHHHHHHHHHHH-hCCCCc
Confidence 7666666666666431 112566777766677888665 457899999999876 576433
Q ss_pred -cc-cCCCcchHHHHHHhcce
Q 024487 237 -YS-ITGTLPLIRELQVRYML 255 (267)
Q Consensus 237 -~~-~~g~~~~~~~~~~~g~~ 255 (267)
.. ++|++ ++.++...|++
T Consensus 331 ~~~~~~g~t-D~~~~~~~giP 350 (393)
T 1cg2_A 331 VEERTGGGT-DAAYAALSGKP 350 (393)
T ss_dssp EESCBSCCC-THHHHGGGSCC
T ss_pred cccCCCccc-HHHHHHhCCCC
Confidence 34 55666 67777776643
No 9
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.94 E-value=1.5e-26 Score=208.87 Aligned_cols=220 Identities=13% Similarity=0.075 Sum_probs=168.1
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHH-HHHHccccCcCCCCcEEEecCCCC-CeeeeecceEEEEEEEEecCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVD-ALVKDGLLNKLKGGPLYWIDTADK-QPCIGTGGMIPWKLHVTGKLF 79 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~-~l~~~~~~~~~~~d~~i~~e~~~~-~i~~g~~G~~~~~i~v~G~~~ 79 (267)
+.|++.+.+++++|+|+|++|||+++. .|++ .|++++.+++ +|++|..|++++ .+..+++|..+++|+++|+++
T Consensus 107 ~~L~~~~~~~~g~v~~~f~~~EE~~~~--~Ga~~~~~~~g~~~~--~d~~~~~h~~~~~~~~~~~~g~~~~~i~v~Gk~~ 182 (394)
T 3ram_A 107 IGLKQVIDQIGGKVVVLGCPAEEGGEN--GSAKASYVKAGVIDQ--IDIALMIHPGNETYKTIDTLAVDVLDVKFYGKSA 182 (394)
T ss_dssp HHHHTTHHHHCSEEEEEECCCTTCCTT--CCHHHHHHHHTGGGG--CSEEECCEEESSBBCCCCBCEEEEEEEEEECBCC
T ss_pred HHHHHhHhhCCceEEEEEECCccCCCC--CchHHHHHHcCCccc--CCEEEEECCccccCCCccccceeEEEEEEEcccc
Confidence 456777667899999999999998721 5899 9999887664 689999998764 566789999999999999999
Q ss_pred CcC-CCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCCC
Q 024487 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (267)
Q Consensus 80 Hss-~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~~ 158 (267)
|+| .|+.|+||+..+++++..|+.+. ..... .++++++.++ +|+..|+||++|++.+++|..+.++
T Consensus 183 Ha~~~P~~g~nAi~~a~~~i~~l~~l~-~~~~~-----------~~~~~~~~i~-gG~~~NvIP~~a~~~~~iR~~~~~~ 249 (394)
T 3ram_A 183 HASENADEALNALDAMISYFNGVAQLR-QHIKK-----------DQRVHGVILD-GGKAANIIPDYTHARFYTRAMTRKE 249 (394)
T ss_dssp BHHHHGGGCBCHHHHHHHHHHHHHHHG-GGSCT-----------TCEEEEEEEE-BCSCTTBCCSEEEEEEEEEESSHHH
T ss_pred ccCCCCcCCCCHHHHHHHHHHHHHHHH-hhCCC-----------CCeeEEEEEE-CCCCCceeCCeEEEEEEEeeCCHHH
Confidence 999 99999999999999999998863 22211 2456777788 9999999999999999999998777
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEe-cccCCcccCCCCCHHHHHHHHHHHHHhCCCC--
Q 024487 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTF-DEATNGVACNLDSRGFHVLCKATEEVVGHVN-- 235 (267)
Q Consensus 159 ~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~-- 235 (267)
.+++.+.|++.++..... +++++++++ ...+|+.. .+.++++.+++++++ +|...
T Consensus 250 ~~~i~~~i~~~~~~~a~~-------------------~g~~~ei~~~~~~~~~~~--~d~~l~~~~~~a~~~-~G~~~~~ 307 (394)
T 3ram_A 250 LDILTEKVNQIARGAAIQ-------------------TGCDYEFGPIQNGVNEFI--KTPKLDDLFAKYAEE-VGEAVID 307 (394)
T ss_dssp HHHHHHHHHHHHHHHHHH-------------------HTCEEEEEESSCCBCCCC--CCHHHHHHHHHHHHH-TTCCBCC
T ss_pred HHHHHHHHHHHHHHHHHH-------------------hCCeEEEEEecCCCCCcc--CCHHHHHHHHHHHHH-hCccccc
Confidence 777777777777665433 257778887 55667654 467899999999988 57422
Q ss_pred ccccCCCcchHHHHH---HhcceeeecCC
Q 024487 236 PYSITGTLPLIRELQ---VRYMLFSMSDV 261 (267)
Q Consensus 236 ~~~~~g~~~~~~~~~---~~g~~f~~~~~ 261 (267)
...++||++ ++++. +..+.|..+.+
T Consensus 308 ~~~~~g~~D-~~~~~~~~P~~~~~~g~~~ 335 (394)
T 3ram_A 308 DDFGYGSTD-TGNVSHVVPTIHPHIKIGS 335 (394)
T ss_dssp SCCCCBCCT-HHHHTTTSCBCCCEEECSC
T ss_pred CCCCccccc-HHHHHHHhchheEEeeecC
Confidence 335566664 44443 23455666543
No 10
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.94 E-value=2.4e-25 Score=206.12 Aligned_cols=235 Identities=16% Similarity=0.174 Sum_probs=172.3
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcC--CCCcEEEecCCC-----CCeeeeecceEEEEEEE
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL--KGGPLYWIDTAD-----KQPCIGTGGMIPWKLHV 74 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~--~~d~~i~~e~~~-----~~i~~g~~G~~~~~i~v 74 (267)
++|++.+.+++++|+|+|+++||+|+ .|++.+++++. +.+ ++|++|+.|+.. ..+.++++|..+++|++
T Consensus 156 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v 231 (485)
T 3dlj_A 156 SAFRALEQDLPVNIKFIIEGMEEAGS---VALEELVEKEK-DRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEV 231 (485)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTHHHHHHHHT-TTTSTTCCEEEECCCBCCC--CCEEEEEECEEEEEEEEE
T ss_pred HHHHHhCCCCCccEEEEEEcccccCC---ccHHHHHHhhh-hhcccCCCEEEEcCCCccCCCCeeEEEeccceEEEEEEE
Confidence 56788888899999999999999987 79999998753 111 478999999743 35678999999999999
Q ss_pred EecCC--CcCCCCCCCCHHHHHHHHHHHHHHhhcc-----------CCCCCCcc-----ccCCCC---------------
Q 024487 75 TGKLF--HSGLPHKAINPLELAMEALKVIQTRFYK-----------DFPPHPKE-----QVYGFE--------------- 121 (267)
Q Consensus 75 ~G~~~--Hss~p~~g~nai~~~~~~i~~l~~~~~~-----------~~~~~~~~-----~~~~~~--------------- 121 (267)
+|+++ |+|. .|.||+..++.++..|..+... .+.+.... ....+.
T Consensus 232 ~G~~~~~H~~~--~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 309 (485)
T 3dlj_A 232 KCRDQDFHSGT--FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLF 309 (485)
T ss_dssp ESCSSCEETTT--STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSC
T ss_pred EECCCCCcCCC--CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccc
Confidence 99999 9997 3445544445544444443111 11111000 000110
Q ss_pred -----------CCCeeeeEEEecCC----CccceeCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhcccccCCCc
Q 024487 122 -----------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPV 186 (267)
Q Consensus 122 -----------~~~t~~~~~i~~gg----~~~n~ip~~a~~~~diR~~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~ 186 (267)
..++++++.|+ +| +..|+||++|++.+++|+.+.++.+++.+.|++.++..+..
T Consensus 310 ~~~~~~~~~~~~~~~~~v~~i~-gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~---------- 378 (485)
T 3dlj_A 310 DTKEEILMHLWRYPSLSIHGIE-GAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSK---------- 378 (485)
T ss_dssp SSHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT----------
T ss_pred cchHHHHHHHhcCCceEEEEEe-cCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccc----------
Confidence 15789999999 77 88999999999999999999999999999999999887553
Q ss_pred ccccCCCCCcc--eEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCCc-cccCCCcchHHHHHH-hc--ceeeecC
Q 024487 187 SKYVLPDENIR--GSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNP-YSITGTLPLIRELQV-RY--MLFSMSD 260 (267)
Q Consensus 187 ~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~~-~~~~g~~~~~~~~~~-~g--~~f~~~~ 260 (267)
++ .++++++...+||+.++.++++++.+.+++++++|..+. ..++|+.+++.++++ .+ ++|..+.
T Consensus 379 ---------~g~~~~~~v~~~~~~pp~~~~~d~~~~~~~~~a~~~~~G~~~~~~~~ggs~Dfa~~~~~~~p~~~i~~g~g 449 (485)
T 3dlj_A 379 ---------RNSSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLG 449 (485)
T ss_dssp ---------TCCSSEEEEEEEEEECCEECCTTSHHHHHHHHHHHHHHSSCCEEEEESSCCHHHHHHHHHTC--CEECCCB
T ss_pred ---------cCCCeeEEEEEcCCCCceeCCCCCHHHHHHHHHHHHHhCCCceecCCCCchhHHHHHHHHhCCCEEEecCC
Confidence 12 366777777789998999999999999999998897544 356677776655644 34 5555554
Q ss_pred CC
Q 024487 261 VP 262 (267)
Q Consensus 261 ~~ 262 (267)
.+
T Consensus 450 ~~ 451 (485)
T 3dlj_A 450 AV 451 (485)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 11
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.94 E-value=3.2e-26 Score=207.37 Aligned_cols=212 Identities=17% Similarity=0.221 Sum_probs=152.3
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEe--cCCC--CCee--ee--ecceEEEEEE
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWI--DTAD--KQPC--IG--TGGMIPWKLH 73 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~--e~~~--~~i~--~g--~~G~~~~~i~ 73 (267)
+.|++.+..++++|+|+|++|||+ + .|++++++++.+++ +|+++.. ||+. +.+. .| .+|..+++|+
T Consensus 136 ~~l~~~~~~~~~~v~~~~~~~EE~-~---~G~~~~~~~g~~~~--~d~~i~~h~ep~~~~g~v~~~~g~~~~g~~~~~i~ 209 (404)
T 1ysj_A 136 MLLNQRRAELKGTVRFIFQPAEEI-A---AGARKVLEAGVLNG--VSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIV 209 (404)
T ss_dssp HHHHTCGGGCSSEEEEEEESCTTT-T---CHHHHHHHTTTTTT--EEEEEEEEEETTSCTTEEEECSEEEECCEEEEEEE
T ss_pred HHHHhccccCCceEEEEEeccccc-c---hhHHHHHhcCCCcC--CCEEEEEecCCCCCCceEEeccChhhcccceEEEE
Confidence 467777778899999999999999 5 79999998775543 4677776 5542 3332 34 6899999999
Q ss_pred EEecCCCcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEe
Q 024487 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (267)
Q Consensus 74 v~G~~~Hss~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~ 153 (267)
++|+++|+|.|+.|+||+..|++++..|+++..+...+ ...++++++.|+ ||...|+||++|++.+|+|+
T Consensus 210 v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~---------~~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~ 279 (404)
T 1ysj_A 210 IKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISS---------LQNAVVSITRVQ-AGTSWNVIPDQAEMEGTVRT 279 (404)
T ss_dssp EECC--------CCCCHHHHHHHHHHHHC--------------------CCEEEEEEEE-ECSCSSSCCSEEEEEEEEEC
T ss_pred EEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCC---------CCCcEEEEEEEE-cCCCCceecCceEEEEEEec
Confidence 99999999999999999999999999987653222221 125789999999 89999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHH-hC
Q 024487 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEV-VG 232 (267)
Q Consensus 154 ~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~-~g 232 (267)
.|.++.+++.+++++.++..... +++++++++...+|++.++ .++++.++++++++ +|
T Consensus 280 ~~~~~~~~i~~~i~~~~~~~~~~-------------------~g~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~g~g 338 (404)
T 1ysj_A 280 FQKEARQAVPEHMRRVAEGIAAG-------------------YGAQAEFKWFPYLPSVQND--GTFLNAASEAAARLGYQ 338 (404)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHH-------------------TTCEEEEEEEEEECCEEEC--GGGHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH-------------------hCCEEEEEEecCCCCccCC--HHHHHHHHHHHHHhcCC
Confidence 99888888888888888765432 2456677666667787554 56899999999998 67
Q ss_pred CCCccccCCCcchHHHHHH
Q 024487 233 HVNPYSITGTLPLIRELQV 251 (267)
Q Consensus 233 ~~~~~~~~g~~~~~~~~~~ 251 (267)
..+...++|++ ++..+.+
T Consensus 339 ~~~~~~~~g~t-D~~~~~~ 356 (404)
T 1ysj_A 339 TVHAEQSPGGE-DFALYQE 356 (404)
T ss_dssp EEECCCBSSCC-THHHHHT
T ss_pred ccccccCCccc-hHHHHHH
Confidence 63323666666 4555544
No 12
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.94 E-value=7.8e-26 Score=208.78 Aligned_cols=227 Identities=15% Similarity=0.140 Sum_probs=169.4
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcC-CCCcEEEecCCC-----CCeeeeecceEEEEEEE-
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL-KGGPLYWIDTAD-----KQPCIGTGGMIPWKLHV- 74 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~-~~d~~i~~e~~~-----~~i~~g~~G~~~~~i~v- 74 (267)
+.|++++..+. +|+|+|++|||+|+ .|++.+++++. +.+ ++|++|+.|++. ..+.+|++|..++++++
T Consensus 143 ~~l~~~~~~~~-~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~i~~g~~G~~~~~~~v~ 217 (472)
T 3pfe_A 143 RALEQQGLPYP-RCILIIEACEESGS---YDLPFYIELLK-ERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVE 217 (472)
T ss_dssp HHHHHTTCCCE-EEEEEEESCGGGTS---TTHHHHHHHHH-HHHCCCSEEEEECCBCSCSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHcCCCCC-cEEEEEEeCCCCCC---hhHHHHHHHhH-hhccCCCEEEEeCCCcCCCCCeeEEEeeeEEEEEEEEEE
Confidence 56777877666 99999999999987 79999998751 222 578999999643 24678999999887555
Q ss_pred -EecCCCcCCCCCC-CCHHHHHHHHHHHHHHhh---------ccCCCCCCc--------------cccCC-------CCC
Q 024487 75 -TGKLFHSGLPHKA-INPLELAMEALKVIQTRF---------YKDFPPHPK--------------EQVYG-------FET 122 (267)
Q Consensus 75 -~G~~~Hss~p~~g-~nai~~~~~~i~~l~~~~---------~~~~~~~~~--------------~~~~~-------~~~ 122 (267)
+|+++|+|.|+.+ .||+..+++++..|++.. ++.+.+... ...++ +..
T Consensus 218 ~~G~~~H~~~~~~~~~nai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (472)
T 3pfe_A 218 LINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQ 297 (472)
T ss_dssp SCSSCBCHHHHTTTSCCHHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCS
T ss_pred eCCCCcccCCCCCCCCCHHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCcccccc
Confidence 7999999998754 599999999999998752 111111000 00000 000
Q ss_pred -----------CCeeeeEEEecCC----CccceeCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhcccccCCCcc
Q 024487 123 -----------PSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVS 187 (267)
Q Consensus 123 -----------~~t~~~~~i~~gg----~~~n~ip~~a~~~~diR~~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~ 187 (267)
.++++++.|+ +| +..|+||++|++.+++|+.|+++.+++.+.|++.++...
T Consensus 298 ~~~~~~~~~~~~~tl~i~~i~-gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~------------- 363 (472)
T 3pfe_A 298 DKQQLILNRTWRPALTVTGAD-GFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP------------- 363 (472)
T ss_dssp CHHHHHHHHHTSCEEEEEEEE-SCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-------------
T ss_pred chHHHHHHhhcCCcEEEeeee-cCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-------------
Confidence 4689999999 65 689999999999999999999999999999998887642
Q ss_pred cccCCCCCcceEEEEEecc-cCCcccCCCCCH-HHHHHHHHHHHHhCCCCccccCCCc-chHHHHHHh--cc
Q 024487 188 KYVLPDENIRGSLTLTFDE-ATNGVACNLDSR-GFHVLCKATEEVVGHVNPYSITGTL-PLIRELQVR--YM 254 (267)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~-~v~~l~~a~~~~~g~~~~~~~~g~~-~~~~~~~~~--g~ 254 (267)
.++++++++... .+||+.++.+++ +++.+++++++++|..+.....|+. +++.++++. |+
T Consensus 364 -------~~g~~v~v~~~~~~~pp~~~~~n~~~l~~~~~~a~~~~~G~~~~~~~~gg~d~f~~~~~~~~Pg~ 428 (472)
T 3pfe_A 364 -------PYNAKVDFKIQNGGSKGWNAPLLSDWLAKAASEASMTYYDKPAAYMGEGGTIPFMSMLGEQFPKA 428 (472)
T ss_dssp -------GGGCEEEEEECSCCBCCEECCCCCHHHHHHHHHHHHHHHSSCCEEEEESSCCHHHHHHHHHCTTC
T ss_pred -------CCCeEEEEEecCCCCCcccCCCCChHHHHHHHHHHHHHcCCCceeccCCCchhhHHHHHHHcCCC
Confidence 125777777766 789998888888 6788999999988985544444444 456767653 65
No 13
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.94 E-value=4.4e-26 Score=205.90 Aligned_cols=210 Identities=14% Similarity=0.204 Sum_probs=169.4
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCC--CCCeeeeecceEEEEEEEEecCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA--DKQPCIGTGGMIPWKLHVTGKLF 79 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~--~~~i~~g~~G~~~~~i~v~G~~~ 79 (267)
+.|++.+. ++++|+|+|+++||.|+ .|++.++.++ +++|+++..+++ .+.+.++.+|..+++|+++|+++
T Consensus 142 ~~l~~~~~-~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~v~G~~~ 213 (396)
T 3rza_A 142 QVIKEQQI-PHGQIQFVITVGEESGL---IGAKELNSEL----LDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTA 213 (396)
T ss_dssp HHHHHHTC-CCCCEEEEEESCGGGTS---HHHHHCCGGG----CCCSEEEEEEESSCTTCEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcCC-CCCCEEEEEEccccccc---HhHhhhchhh----cccceEEEEecCCCcceEEEcCCceEEEEEEEEeEec
Confidence 45666664 68999999999999987 7999886543 456888888865 36789999999999999999999
Q ss_pred CcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCCCH
Q 024487 80 HSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (267)
Q Consensus 80 Hss~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~~~ 159 (267)
|+|.|+.|+||+..+++++..|+.. .+. ...+++++.|+ +|...|+||++|++.+++|+.|.++.
T Consensus 214 Ha~~p~~g~nai~~~~~~i~~l~~~---~~~-----------~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~ 278 (396)
T 3rza_A 214 HASTPKEGVSAINIAAKAISRMKLG---QVD-----------EITTANIGKFH-GGSATNIVADEVILEAEARSHDPERI 278 (396)
T ss_dssp BTTSGGGSBCHHHHHHHHHHHSCCE---EEE-----------TTEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHHH
T ss_pred CCCCccccccHHHHHHHHHHhcccC---CCC-----------CCceeeeeEEe-cCCCCcccCceEEEEEEEEeCCHHHH
Confidence 9999999999999999999887542 111 14678999999 89999999999999999999988777
Q ss_pred HHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC-ccc
Q 024487 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYS 238 (267)
Q Consensus 160 ~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~-~~~ 238 (267)
+++.++|++.++..... ++.++++++...+|++.++.++++++.+.+++++. |.++ ...
T Consensus 279 ~~~~~~i~~~~~~~a~~-------------------~g~~~~i~~~~~~p~~~~~~d~~l~~~~~~~~~~~-g~~~~~~~ 338 (396)
T 3rza_A 279 KTQVKHMTDVFETTASE-------------------LGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNL-GLSANTII 338 (396)
T ss_dssp HHHHHHHHHHHHHHHHH-------------------TTCEEEEEEEEEECCEECCTTSHHHHHHHHHHHHT-TCCCCEEE
T ss_pred HHHHHHHHHHHHHHHHh-------------------cCCEEEEEEEeccCCcccCCCcHHHHHHHHHHHHc-CCCceecc
Confidence 78888888777765443 25677777777789988888899999999999984 7643 345
Q ss_pred cCCCcchHHHHHHhcce
Q 024487 239 ITGTLPLIRELQVRYML 255 (267)
Q Consensus 239 ~~g~~~~~~~~~~~g~~ 255 (267)
++|++ +++++...|++
T Consensus 339 ~~g~t-D~~~~~~~giP 354 (396)
T 3rza_A 339 SGGGS-DGSIINTFGIP 354 (396)
T ss_dssp CSSCC-HHHHHGGGTCC
T ss_pred cceec-cHHHHhhCCCc
Confidence 56666 56777776544
No 14
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.94 E-value=2e-26 Score=205.45 Aligned_cols=206 Identities=15% Similarity=0.148 Sum_probs=160.8
Q ss_pred hhhhcccCCCCccEEEEEEecccc-CCCCcccHHHHHHccccCcCCCCcEEEecCCCCCeeeeecceEEEEEEEEecCCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFH 80 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~-g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~i~~g~~G~~~~~i~v~G~~~H 80 (267)
+.|++.+ ++++|+|+|+++||+ |+ .|++++++++ .++|+++..|++.+.+.++++|..+++|+++|+++|
T Consensus 118 ~~l~~~~--~~~~v~~~~~~~EE~~g~---~G~~~~~~~~----~~~d~~i~~ep~~~~i~~~~~G~~~~~i~~~G~~~H 188 (356)
T 3ct9_A 118 LQLCRTS--QNYNLIYLASCEEEVSGK---EGIESVLPGL----PPVSFAIVGEPTEMQPAIAEKGLMVLDVTATGKAGH 188 (356)
T ss_dssp HHHTTSC--CSSEEEEEEECCGGGTCT---TTHHHHGGGS----CCCSEEEECCSBTTCCEEEECCCEEEEEEEECBCCB
T ss_pred HHHHhcC--CCCCEEEEEEeCcccCCc---cCHHHHHhhC----CCCCEEEEcCCCCceEEEeeeEEEEEEEEEECCCcc
Confidence 4566665 789999999999998 76 7999998765 247899999998888889999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCCCHH
Q 024487 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (267)
Q Consensus 81 ss~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~~~~ 160 (267)
+|.| .|+||+..|++++..|+.+..+... .....++++++.|+ +|...|+||++|++.+|+|+.|.++.+
T Consensus 189 a~~p-~g~nAi~~~~~~i~~l~~~~~~~~~--------~~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR~~~~~~~~ 258 (356)
T 3ct9_A 189 AARD-EGDNAIYKVLNDIAWFRDYRFEKES--------PLLGPVKMSVTVIN-AGTQHNVVPDKCTFVVDIRSNELYSNE 258 (356)
T ss_dssp TTSS-CCBCTTGGGHHHHHHHHHCCCSCCB--------TTTBSCEEEEEEEE-ECSSTTBCCSEEEEEEEEECCTTCCHH
T ss_pred cCCC-CCCCHHHHHHHHHHHHHhhhccccc--------ccCCCCcEEeeEEe-cCCcCCcCCCceEEEEEEeeCCCCCHH
Confidence 9999 9999999999999999875322111 11235789999999 899999999999999999999999988
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCCccccC
Q 024487 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSIT 240 (267)
Q Consensus 161 ~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~~~~~~ 240 (267)
++.++|++.++. +++++. ..+|++.++.++++++.+.+++++ +..++
T Consensus 259 ~~~~~i~~~~~~--------------------------~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~ 305 (356)
T 3ct9_A 259 DLFAEIRKHIAC--------------------------DAKARS-FRLNSSRIDEKHPFVQKAVKMGRI------PFGSP 305 (356)
T ss_dssp HHHHHHHHHCCS--------------------------EEEESC-SCSCCEECCTTSHHHHHHHHTTCC------CEEEC
T ss_pred HHHHHHHHHhhC--------------------------eEEEee-ccCCCCCCCCCCHHHHHHHHHhcC------Ccccc
Confidence 888777766531 223332 567888888899999988877542 33456
Q ss_pred CCcchHHHHHHhcceeeecC
Q 024487 241 GTLPLIRELQVRYMLFSMSD 260 (267)
Q Consensus 241 g~~~~~~~~~~~g~~f~~~~ 260 (267)
|++.+. .+.--++.|+|+.
T Consensus 306 g~tD~~-~~~~p~v~~G~g~ 324 (356)
T 3ct9_A 306 TLSDQA-LMSFASVKIGPGR 324 (356)
T ss_dssp SCCGGG-GCCSCEEECCSSB
T ss_pred cccchh-hcCCCEEEECCCc
Confidence 666443 3322456677653
No 15
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.94 E-value=6e-26 Score=203.34 Aligned_cols=212 Identities=15% Similarity=0.201 Sum_probs=169.9
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC--CCeeeeecceEEEEEEEEecCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~--~~i~~g~~G~~~~~i~v~G~~~ 79 (267)
+.|++.+. ++++|+|+|+++||.|+ .|++.+..+ .+++|+++..+++. +.+.++.+|..+++|+++|+++
T Consensus 121 ~~l~~~~~-~~~~v~~~~~~~EE~g~---~Ga~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~~~G~~~ 192 (373)
T 3gb0_A 121 RVLKEKNI-PHGTIEFIITVGEESGL---VGAKALDRE----RITAKYGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTA 192 (373)
T ss_dssp HHHHHTTC-CCCCEEEEEESCGGGTS---HHHHHSCGG----GCCCSEEEEEEECSCTTEEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcCC-CCCCEEEEEEeccccCc---hhhhhhCHH----hcCCCEEEEEcCCCCCCeEEEcCCCcEEEEEEEEeEec
Confidence 45677764 78999999999999987 799988543 34678888888653 5788999999999999999999
Q ss_pred CcC-CCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCCC
Q 024487 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (267)
Q Consensus 80 Hss-~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~~ 158 (267)
|++ .|+.|+||+..+++++..|+.. .+. ...+++++.|+ +|...|+||++|++.+|+|+.|.++
T Consensus 193 Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~-----------~~~~~~vg~i~-gG~~~Nvip~~~~~~~d~R~~~~~~ 257 (373)
T 3gb0_A 193 HAGVAPEKGVSAITIAAKAIAKMPLG---RID-----------SETTANIGRFE-GGTQTNIVCDHVQIFAEARSLINEK 257 (373)
T ss_dssp BTTTCGGGSBCHHHHHHHHHTTSCCE---EEE-----------TTEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHH
T ss_pred CCCCChhhCcCHHHHHHHHHHhcccc---cCC-----------CccccceeEEe-cCcccccccceEEEEEEEecCCHHH
Confidence 999 8999999999999999877541 111 24678999999 8899999999999999999999888
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCCc-c
Q 024487 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNP-Y 237 (267)
Q Consensus 159 ~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~~-~ 237 (267)
.+++.++|++.++..... ++.++++++...+|++.++.++++++.+.+++++ +|.++. .
T Consensus 258 ~~~~~~~i~~~~~~~~~~-------------------~g~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~~~~ 317 (373)
T 3gb0_A 258 MEAQVAKMKEAFETTAKE-------------------MGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEK-IGRTPSLH 317 (373)
T ss_dssp HHHHHHHHHHHHHHHHHH-------------------TTCEEEEEEEEEECCEECCTTCHHHHHHHHHHHH-TTCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHh-------------------cCCeEEEEEecccCCcccCCCCHHHHHHHHHHHH-hCCCceEe
Confidence 888888888877765443 2567777777778888888889999999999998 576433 4
Q ss_pred ccCCCcchHHHHHHhcceee
Q 024487 238 SITGTLPLIRELQVRYMLFS 257 (267)
Q Consensus 238 ~~~g~~~~~~~~~~~g~~f~ 257 (267)
.++|++ +++++.+.|++.+
T Consensus 318 ~~~g~~-D~~~~~~~gip~~ 336 (373)
T 3gb0_A 318 QSGGGS-DANVIAGHGIPTV 336 (373)
T ss_dssp ECSSCC-HHHHHHHTTCCEE
T ss_pred cccCcc-hHHHHHhCCCCEE
Confidence 556666 5677777765533
No 16
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.93 E-value=8.1e-25 Score=202.18 Aligned_cols=232 Identities=14% Similarity=0.132 Sum_probs=172.9
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCc-CCCCcEEEecCC-----CCCeeeeecceEEEEEEEE
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNK-LKGGPLYWIDTA-----DKQPCIGTGGMIPWKLHVT 75 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~-~~~d~~i~~e~~-----~~~i~~g~~G~~~~~i~v~ 75 (267)
+.|++.+.+++++|+|+|++|||.|+ .|++.+++++...- .++|++++.|+. .+.+.++++|..+++|+++
T Consensus 149 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~~~~~G~~~~~i~v~ 225 (479)
T 2zog_A 149 EAYQKTGQEIPVNLRFCLEGMEESGS---EGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVE 225 (479)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTC---TTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHhCCCCCCcEEEEEecccccCC---ccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEEEecceEEEEEEEEE
Confidence 56777887889999999999999987 79999998752100 147899999863 3457789999999999999
Q ss_pred ecC--CCcCCCCCCCCHHHHHHHHHHHHHHhhccC-----------CCCCCcc-----ccCCCC----------------
Q 024487 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPKE-----QVYGFE---------------- 121 (267)
Q Consensus 76 G~~--~Hss~p~~g~nai~~~~~~i~~l~~~~~~~-----------~~~~~~~-----~~~~~~---------------- 121 (267)
|++ +|||.+ |.||+..+++++..|+.+.... +.+.... ....+.
T Consensus 226 G~~~~~Hs~~~--g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 303 (479)
T 2zog_A 226 CSDKDLHSGVY--GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHS 303 (479)
T ss_dssp CCSSCEEHHHH--TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCS
T ss_pred eCCCCCccCCC--CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCcccccc
Confidence 999 999985 7899999999988887642211 0000000 000000
Q ss_pred ----------CCCeeeeEEEecCC----CccceeCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhcccccCCCcc
Q 024487 122 ----------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVS 187 (267)
Q Consensus 122 ----------~~~t~~~~~i~~gg----~~~n~ip~~a~~~~diR~~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~ 187 (267)
..++++++.|+ +| ...|+||++|++.+++|+.|+++.+++.++|++.++...+...
T Consensus 304 ~~~~~~~~~~~~~~~~v~~i~-gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~--------- 373 (479)
T 2zog_A 304 CKKDILMHRWRYPSLSLHGIE-GAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQ--------- 373 (479)
T ss_dssp SHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTC---------
T ss_pred chHHHHHHhhcCCCeEEeeee-cCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccC---------
Confidence 14689999999 76 7899999999999999999999999999999999987654310
Q ss_pred cccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCCcc-ccCCCcchHHHHHH-hccee
Q 024487 188 KYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPY-SITGTLPLIRELQV-RYMLF 256 (267)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~g~~~~~~~~~~-~g~~f 256 (267)
.+.++++++...+|++.++.++++++.+.+++++++|..+.. ..+|+++++..+.+ .|++.
T Consensus 374 --------~~~~~~~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~g~~~~~~~~~gs~d~~~~~~~~~~~p~ 436 (479)
T 2zog_A 374 --------SPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNV 436 (479)
T ss_dssp --------CCSEEEEEEEEEECCEECCTTSHHHHHHHHHHHHHHSSCCEEEEESSCCTHHHHHHHHHCSEE
T ss_pred --------CCceEEEEecCCCCceecCCCCHHHHHHHHHHHHHhCCCceecCCCCccchHHHHHHHhCCCE
Confidence 124566666666888888999999999999999988875443 45666765445544 35543
No 17
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.93 E-value=4.2e-25 Score=204.26 Aligned_cols=232 Identities=14% Similarity=0.202 Sum_probs=169.3
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCC-CCcEEEecCCCC-----CeeeeecceEEEEEEEE
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLK-GGPLYWIDTADK-----QPCIGTGGMIPWKLHVT 75 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~-~d~~i~~e~~~~-----~i~~g~~G~~~~~i~v~ 75 (267)
+.|++.+..++++|+|+|++|||+|+ .|++.+++++. +.++ +|++|+.+++.. .+.++++|..+++|+++
T Consensus 160 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~i~~~~~~~~~~~~~i~~~~~G~~~~~i~v~ 235 (481)
T 2pok_A 160 RKYMQHHDDLPVNISFIMEGAEESAS---TDLDKYLEKHA-DKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVK 235 (481)
T ss_dssp HHHHHTCSSCSSEEEEEEESCGGGTT---TTHHHHHHHHH-HHHTTCSEEECSCCBBCTTSCEEEECCBCEEEEEEEEEE
T ss_pred HHHHHhcCCCCCCEEEEEecccccCc---hhHHHHHHHhH-hhccCCCEEEECCCCccCCCCeeEEEecceeEEEEEEEe
Confidence 56677655789999999999999987 79988887641 1134 788998887531 46679999999999999
Q ss_pred ecC--CCcCCCCCCCCHHHHHHHHHHHHHHhhc--------cCCCCCCcc-----ccC----------------------
Q 024487 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFY--------KDFPPHPKE-----QVY---------------------- 118 (267)
Q Consensus 76 G~~--~Hss~p~~g~nai~~~~~~i~~l~~~~~--------~~~~~~~~~-----~~~---------------------- 118 (267)
|++ +||+.|+.|.||+..+++++..|++... +...+.... ...
T Consensus 236 G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (481)
T 2pok_A 236 SADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEE 315 (481)
T ss_dssp CSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCS
T ss_pred cCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCccccccccc
Confidence 999 8999999999999999999998765310 000000000 000
Q ss_pred C--C----CCCCeeeeEEEecCCC----ccceeCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhcccccCCCccc
Q 024487 119 G--F----ETPSTMKPTQWSYPGG----GINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSK 188 (267)
Q Consensus 119 ~--~----~~~~t~~~~~i~~gg~----~~n~ip~~a~~~~diR~~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~ 188 (267)
+ . ...++++++.|+ +|. ..|+||++|++.+|+|+.|+++.+++.++|++.++....
T Consensus 316 g~~~~~~~~~~~t~~vg~i~-gG~~~~~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~------------- 381 (481)
T 2pok_A 316 RMAFLKRFFFDPALNIEGIQ-SGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF------------- 381 (481)
T ss_dssp HHHHHHHHHHSCEEEEEEEE-EECCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-------------
T ss_pred chhHHHHHhhcCeEeEEeee-cCCCCCCCCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-------------
Confidence 0 0 124789999999 665 689999999999999999999999999999998876432
Q ss_pred ccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC-ccccCCCc-chHHHHHHhc---ceeeecC
Q 024487 189 YVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTL-PLIRELQVRY---MLFSMSD 260 (267)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~-~~~~~g~~-~~~~~~~~~g---~~f~~~~ 260 (267)
.++++ ++...+|++.++.++++++.+.+++++++|..+ .....||+ ++..+.+..| +.|+++.
T Consensus 382 -------~~~~v--~~~~~~p~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~gg~~D~~~~~~~~g~p~v~~G~g~ 449 (481)
T 2pok_A 382 -------DKVEL--YYTLGEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTVFDALEVPMVAFGLGN 449 (481)
T ss_dssp -------TTEEE--EEEEEECCBCCCSCSHHHHHHHHHHTTTCTTCEEEESCBSSCCTHHHHHHHHCCCEEBCCSBC
T ss_pred -------CceEE--EEccCCCcccCCCCCHHHHHHHHHHHHHcCCCccccccCCCCCchHHHHHHcCCCEEEecCCC
Confidence 13444 444567888888999999999999999888744 33344444 5544444444 4566664
No 18
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.92 E-value=2.6e-25 Score=198.78 Aligned_cols=203 Identities=17% Similarity=0.149 Sum_probs=155.1
Q ss_pred hhhhcccCCC---Ccc--EEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEe---cCCCCCeeeeecceEEEEEE
Q 024487 2 RKLGETKLKL---KST--VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWI---DTADKQPCIGTGGMIPWKLH 73 (267)
Q Consensus 2 ~~L~~~~~~~---~~~--I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~---e~~~~~i~~g~~G~~~~~i~ 73 (267)
+.|++.+.++ +++ |+|+|++|||.++. .|++++++++ ++|+++.. +|+. +.++++|..+++|+
T Consensus 113 ~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~--~G~~~~~~~~-----~~d~~i~~d~~~p~~--i~~~~~G~~~~~i~ 183 (364)
T 2rb7_A 113 RDRLNALKAAGRSQKDMALGLLITGDEEIGGM--NGAAKALPLI-----RADYVVALDGGNPQQ--VITKEKGIIDIKLT 183 (364)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEEESCGGGTST--TTHHHHGGGC-----EEEEEEECSSSBTTE--EEEEECEEEEEEEE
T ss_pred HHHHHhCCCCcccCCCccEEEEEEeccccCch--hhHHHHHhcC-----CCCEEEEccCCcccc--eEEEeeeEEEEEEE
Confidence 4566665555 568 99999999997431 6999998764 46788884 4444 88999999999999
Q ss_pred EEecCCCcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCC--CCCeeeeEEEecCCCccceeCCeeEEEEEE
Q 024487 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFE--TPSTMKPTQWSYPGGGINQIPGECTVSGDV 151 (267)
Q Consensus 74 v~G~~~Hss~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~--~~~t~~~~~i~~gg~~~n~ip~~a~~~~di 151 (267)
++|+++|++.|+.|+||+..+++++..|++++. .+ .. ..++++++.|+ +|...|+||++|++.+|+
T Consensus 184 v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~--------~~~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~i 251 (364)
T 2rb7_A 184 CTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EE--------NEDHWHRTVNLGRIR-AGESTNKVPDVAEGWFNI 251 (364)
T ss_dssp EECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CC--------CTTCCSCEEEEEEEE-ECSCTTEECSEEEEEEEE
T ss_pred EEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---ch--------hhcCCCceEEEEEEe-cCCcCcccCcceEEEEEE
Confidence 999999999999999999999999999987521 11 11 25789999999 999999999999999999
Q ss_pred EeCCCCCHHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHh
Q 024487 152 RLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVV 231 (267)
Q Consensus 152 R~~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~ 231 (267)
|+.|.++.+++.++|++.++. +++ ...+||+.++.++++++.++++++ .+
T Consensus 252 R~~~~~~~~~i~~~i~~~~~~--------------------------~v~---~~~~~~~~~~~~~~l~~~~~~~~~-~~ 301 (364)
T 2rb7_A 252 RVTEHDDPGALIDKIRKTVSG--------------------------TVS---IVRTVPVFLAADSPYTERLLALSG-AT 301 (364)
T ss_dssp EECTTSCHHHHHHHHHHHCSS--------------------------EEE---EEEEECCEECCCCHHHHHHHHHHC-CE
T ss_pred eeCCCCCHHHHHHHHHHHhhh--------------------------hEE---eccCCccccCCCCHHHHHHHHHHH-hc
Confidence 999999988888877776531 222 234567778888999999999987 45
Q ss_pred CCCCccccCCCcchHHHHHHhc---ceeeecC
Q 024487 232 GHVNPYSITGTLPLIRELQVRY---MLFSMSD 260 (267)
Q Consensus 232 g~~~~~~~~g~~~~~~~~~~~g---~~f~~~~ 260 (267)
|.+ ..|++ ++.++.+.+ +.|+|++
T Consensus 302 g~~----~~g~~-D~~~~~~~~~p~v~~Gp~~ 328 (364)
T 2rb7_A 302 AGK----AHGAS-DARYLGENGLTGVVWGAEG 328 (364)
T ss_dssp EEE----ESSCC-GGGGTGGGTCCEEECCCCC
T ss_pred CCC----CCCCc-hHHHHHhcCCCEEEECCCC
Confidence 532 44554 455555433 4566654
No 19
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.92 E-value=3e-25 Score=202.76 Aligned_cols=212 Identities=14% Similarity=0.046 Sum_probs=161.4
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC-CCeeeeecceEEEEEEEEecCCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGMIPWKLHVTGKLFH 80 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~-~~i~~g~~G~~~~~i~v~G~~~H 80 (267)
+.|++++..++++|+|+|++|||+| .|++.+..+. +++|++++.|++. +.+.++.+|..+++|+++|+++|
T Consensus 179 ~~L~~~~~~~~~~i~~if~~~EE~g----~Ga~~~~~~~----~~~d~~~~~d~~~~g~i~~~~~G~~~~~i~v~G~~~H 250 (434)
T 3ife_A 179 NYLIHNPQIKHGKIRVAFTPDEEIG----RGPAHFDVEA----FGASFAYMMDGGPLGGLEYESFNAAGAKLTFNGTNTH 250 (434)
T ss_dssp HHHHTCTTSCBCCEEEEEESCGGGT----CTGGGCCHHH----HCCSEEEECCCCSTTEEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCCCCCCCCEEEEEECCcccC----hHHHHhhhhh----cCCCEEEEecCCCCCceeecCCCeEEEEEEEEEEecC
Confidence 5678888789999999999999998 4787764332 3578999999864 67889999999999999999999
Q ss_pred cC-CCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCCCH
Q 024487 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (267)
Q Consensus 81 ss-~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~~~ 159 (267)
|| .|+.|+||+..+++++..|++. ..+. .++.+++.++ + ...|+||++|++.+++|+.|.++.
T Consensus 251 ag~~P~~g~nAi~~aa~~i~~l~~~---~~~~-----------~~~~~~g~i~-~-g~~n~iP~~a~~~~diR~~~~~~~ 314 (434)
T 3ife_A 251 PGTAKNKMRNATKLAMEFNGHLPVE---EAPE-----------YTEGYEGFYH-L-LSLNGDVEQSKAYYIIRDFDRKNF 314 (434)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTT---CSGG-----------GCCTTCCEEE-E-EEEEECSSEEEEEEEEEESSHHHH
T ss_pred CCCCcccchhHHHHHHHHHHhcccc---cCCC-----------cceeeeEEEE-e-eeEeEecCeEEEEEEEecCCHHHH
Confidence 87 7999999999999999887653 1110 1223445555 3 347899999999999999998888
Q ss_pred HHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcc-eEEEEEecccCCcc--cCCCCCHHHHHHHHHHHHHhCCCCc
Q 024487 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIR-GSLTLTFDEATNGV--ACNLDSRGFHVLCKATEEVVGHVNP 236 (267)
Q Consensus 160 ~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~--~~~~~~~~v~~l~~a~~~~~g~~~~ 236 (267)
+++.++|++.++...... + .++++++...++++ .++.++++++.+++++++ +|..+.
T Consensus 315 ~~i~~~i~~~~~~~~~~~-------------------g~~~~~v~~~~~~~~~~~~~~~d~~l~~~~~~a~~~-~G~~~~ 374 (434)
T 3ife_A 315 EARKNTIENIVKQMQEKY-------------------GQDAVVLEMNDQYYNMLEKIEPVREIVDIAYEAMKS-LNIEPN 374 (434)
T ss_dssp HHHHHHHHHHHHHHHHHH-------------------CGGGEEEEEEEEECCTHHHHGGGTHHHHHHHHHHHH-TTCCCE
T ss_pred HHHHHHHHHHHHHHHHhc-------------------CCceEEEEEeecccchhccccCCHHHHHHHHHHHHH-hCCCCE
Confidence 888888888887655431 2 34566665555553 567788999999999998 687443
Q ss_pred -cccCCCcchHHHHHHhcceeee
Q 024487 237 -YSITGTLPLIRELQVRYMLFSM 258 (267)
Q Consensus 237 -~~~~g~~~~~~~~~~~g~~f~~ 258 (267)
..++||+ +++++.+.|++.+.
T Consensus 375 ~~~~~ggt-D~~~~~~~GiP~~~ 396 (434)
T 3ife_A 375 IHPIRGGT-DGSQLSYMGLPTPN 396 (434)
T ss_dssp ECCBSSCC-HHHHHHHTTCCCCE
T ss_pred EeecccCc-hHHHHhhCCCcEEE
Confidence 4556666 67777777665443
No 20
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.91 E-value=1.2e-23 Score=190.61 Aligned_cols=219 Identities=19% Similarity=0.173 Sum_probs=161.9
Q ss_pred hhhhcccCCCCccEEEEEEecccc-----CCCCcccHHHHHH------------ccc---------------c-----Cc
Q 024487 2 RKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVK------------DGL---------------L-----NK 44 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~-----g~~~~~Ga~~l~~------------~~~---------------~-----~~ 44 (267)
+.|++++.+++++|+|+|+++||. |. .|++.++. +|. + +.
T Consensus 103 ~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~---~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~ 179 (408)
T 3n5f_A 103 QTMNEHGVVTHHPIEVVAFTDEEGARFRFGM---IGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKP 179 (408)
T ss_dssp HHHHHTTCCCSSCEEEEEESCSSCTTTTCCC---HHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCT
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCC---cCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhhhhhcccCc
Confidence 567888888999999999999996 33 68998872 111 1 11
Q ss_pred CCCCcEEEecCCC----------CCeeeeecceEEEEEEEEecCCCc-CCC-CCCCCHHHHHHHHHHHHHHhhccCCCCC
Q 024487 45 LKGGPLYWIDTAD----------KQPCIGTGGMIPWKLHVTGKLFHS-GLP-HKAINPLELAMEALKVIQTRFYKDFPPH 112 (267)
Q Consensus 45 ~~~d~~i~~e~~~----------~~i~~g~~G~~~~~i~v~G~~~Hs-s~p-~~g~nai~~~~~~i~~l~~~~~~~~~~~ 112 (267)
.++|+++..|... ..+..+++|..+++|+++|+++|+ +.| +.|+||+..+++++..|+++. +.++
T Consensus 180 ~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~-- 256 (408)
T 3n5f_A 180 GTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG-- 256 (408)
T ss_dssp TTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS--
T ss_pred cCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC--
Confidence 1345666665432 234568999999999999999999 589 589999999999999998864 2211
Q ss_pred CccccCCCCCCCeeeeEEEecCC-CccceeCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhcccccCCCcccccC
Q 024487 113 PKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVL 191 (267)
Q Consensus 113 ~~~~~~~~~~~~t~~~~~i~~gg-~~~n~ip~~a~~~~diR~~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 191 (267)
+++++++.|+ +| ...|+||++|++.+++|+.|.++.+++.+.|++.++.....
T Consensus 257 ----------~~~~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~--------------- 310 (408)
T 3n5f_A 257 ----------TTVGTVGQLH-VYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKE--------------- 310 (408)
T ss_dssp ----------SCEEEEEEEE-EESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH---------------
T ss_pred ----------CcEEEEEEEE-ecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 4789999999 65 89999999999999999998777777777777777665433
Q ss_pred CCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC-ccccCCCcchHHHHHH---hcceeeecC
Q 024487 192 PDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQV---RYMLFSMSD 260 (267)
Q Consensus 192 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~-~~~~~g~~~~~~~~~~---~g~~f~~~~ 260 (267)
++.++++++...+|+..+ +.++++.++++++++ |.++ ....+|++++ +++.+ ..+.|.++.
T Consensus 311 ----~g~~~~i~~~~~~p~~~~--d~~l~~~~~~a~~~~-g~~~~~~~~~ggtD~-~~~~~~iP~~~~~~~~~ 375 (408)
T 3n5f_A 311 ----RNVRVTTERLQEMPPVLC--SDEVKRAAEAACQKL-GYPSFWLPSGAAHDS-VQLAPICPIGMIFVRSQ 375 (408)
T ss_dssp ----HTCEEEEEEEEEECCEEC--CHHHHHHHHHHHHHH-TCCCCEEEESSCCTT-TTTTTTSCEEEEEECCG
T ss_pred ----hCCeEEEEEecCCCCcCC--CHHHHHHHHHHHHHc-CCCcccCCCcCchHH-HHHHHHCCEEEEEeCCC
Confidence 256677777666777644 568999999999997 7633 3455666643 33332 336677764
No 21
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.91 E-value=6.6e-24 Score=193.11 Aligned_cols=223 Identities=15% Similarity=0.093 Sum_probs=162.9
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCC--CcccHHHHHH----ccccC----------------cC-----------CCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAI--TGVGVDALVK----DGLLN----------------KL-----------KGG 48 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~--~~~Ga~~l~~----~~~~~----------------~~-----------~~d 48 (267)
+.|++.+.+++++|+|+|++|||+++- ...|++.+.. +++++ ++ ++|
T Consensus 107 ~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~ 186 (423)
T 1z2l_A 107 DWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIK 186 (423)
T ss_dssp HHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEE
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCce
Confidence 567787888999999999999998520 0148888875 22211 00 224
Q ss_pred cEEEecCC----------CCCeeeeecceEEEEEEEEecCCCcC-CCC-CCCCHHHHHHHHHHHHHHhhccCCCCCCccc
Q 024487 49 PLYWIDTA----------DKQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFPPHPKEQ 116 (267)
Q Consensus 49 ~~i~~e~~----------~~~i~~g~~G~~~~~i~v~G~~~Hss-~p~-~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~ 116 (267)
+++..+.. ...+..+++|..+++|+++|+++|+| .|+ .|+||+..+++++..|+++..+ ..+
T Consensus 187 ~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~-~~~----- 260 (423)
T 1z2l_A 187 AFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR-MGD----- 260 (423)
T ss_dssp EEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH-HCT-----
T ss_pred EEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh-cCC-----
Confidence 45544322 12355789999999999999999999 795 8999999999999999876432 121
Q ss_pred cCCCCCCCeeeeEEEecCC-CccceeCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCC
Q 024487 117 VYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDEN 195 (267)
Q Consensus 117 ~~~~~~~~t~~~~~i~~gg-~~~n~ip~~a~~~~diR~~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (267)
.++++++.|+ +| ...|+||++|++.+|+|+.|.++.+++.+.|++.++.....
T Consensus 261 ------~~~~~vg~i~-gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~------------------- 314 (423)
T 1z2l_A 261 ------PLVLTFGKVE-PRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDE------------------- 314 (423)
T ss_dssp ------TCEEECCCEE-EESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH-------------------
T ss_pred ------CceEEEEEEe-ecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 4688999999 65 89999999999999999999888888888888877765432
Q ss_pred cceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC-ccccCCCcchHHHHHH---hcceeeecC
Q 024487 196 IRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQV---RYMLFSMSD 260 (267)
Q Consensus 196 ~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~-~~~~~g~~~~~~~~~~---~g~~f~~~~ 260 (267)
++.+++++....+|++.+ ++++++.++++++++ |.++ ...++|++ +++.+.+ ..+.|+|+.
T Consensus 315 ~g~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~-g~~~~~~~~~ggt-D~~~~~~~~p~~~~~~p~~ 379 (423)
T 1z2l_A 315 MDIGIDIDLWMDEEPVPM--NKELVATLTELCERE-KLNYRVMHSGAGH-DAQIFAPRVPTCMIFIPSI 379 (423)
T ss_dssp HTCEEEEEEEEEECCEEC--CHHHHHHHHHHHHHT-TCCEEEEEESSCC-THHHHTTTSCEEEEEECCG
T ss_pred hCCeEEEEEecCCCCccC--CHHHHHHHHHHHHHc-CCCeEEecCCCcc-cHHHHHhhCCEEEEEeCCC
Confidence 245666766566777755 578999999999997 7643 34666676 4555543 346777764
No 22
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.90 E-value=6.7e-24 Score=196.73 Aligned_cols=221 Identities=13% Similarity=0.085 Sum_probs=135.7
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccC--------------------------------------
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-------------------------------------- 43 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~-------------------------------------- 43 (267)
+.|++.+.+++++|+|+|++|||+|+ .|+++++++....
T Consensus 151 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~g~~~~~~~~~~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~ 227 (492)
T 3khx_A 151 KILEDMNVDWKKRIHMIIGTDEESDW---KCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDY 227 (492)
T ss_dssp HHHHHTTCCCSSEEEEEEECCTTCCC---CTTSHHHHHSCCCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSE
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCC---cCHHHHHHhCcCCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccc
Confidence 56788888899999999999999998 7999999864210
Q ss_pred -----------cCCCCcE--EEecCCCC-Ce---------eeeecceE-----EEEEEEEecCCCcCCCCCCCCHHHHHH
Q 024487 44 -----------KLKGGPL--YWIDTADK-QP---------CIGTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAM 95 (267)
Q Consensus 44 -----------~~~~d~~--i~~e~~~~-~i---------~~g~~G~~-----~~~i~v~G~~~Hss~p~~g~nai~~~~ 95 (267)
...||.+ ++.+|+.. .+ ..+.+|.. +++|+++|+++|+|.|+.|+||+..|+
T Consensus 228 ~~~~~~~g~~~n~vpd~~~aiv~ept~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a 307 (492)
T 3khx_A 228 ELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLL 307 (492)
T ss_dssp EEEEEEECSCTTSCCCEEEEEEEECSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHH
T ss_pred eeEEecccccCCcCCchHheEeecccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHH
Confidence 0113333 44555431 11 23568888 999999999999999999999999999
Q ss_pred HHHHHHH------Hhh---ccCCCC--CCcc----ccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCCCHH
Q 024487 96 EALKVIQ------TRF---YKDFPP--HPKE----QVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (267)
Q Consensus 96 ~~i~~l~------~~~---~~~~~~--~~~~----~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~~~~ 160 (267)
+++..|. .++ .+.+.. .... ..-...+.++++++.|+ +|. |++|++.+|+|+++.++.+
T Consensus 308 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~-~g~-----P~~a~~~idiR~~~~~~~~ 381 (492)
T 3khx_A 308 KFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVIT-YDN-----ENAGLFGINLRYPEGFEFE 381 (492)
T ss_dssp HHHTTSCBCHHHHHHHHHHHHHTTTCTTSGGGTCC-------CCEEEEEEEE-EET-----TTCCEEEEEEEECTTCCHH
T ss_pred HHHHhcCCCchHHHHHHHHHHhhCCCCCccccCCccccCCcCccEEeeeEEE-Eec-----CCEEEEEEEeeCCCCCCHH
Confidence 9998775 111 011100 0000 00012346889999998 553 9999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC-cccc
Q 024487 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSI 239 (267)
Q Consensus 161 ~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~-~~~~ 239 (267)
++.++|++.++.. +.++++ ....+|+..+.++++++.+++++++++|..+ +..+
T Consensus 382 ~v~~~i~~~~~~~-----------------------g~~~~i--~~~~~p~~~~~d~~lv~~l~~a~~~~~G~~~~~~~~ 436 (492)
T 3khx_A 382 KAMDRFANEIQQY-----------------------GFEVKL--GKVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTI 436 (492)
T ss_dssp HHHHHHHHHHGGG-----------------------TEEEEE--EEEECCBCCGGGCHHHHHHHHHHHTTCC--------
T ss_pred HHHHHHHHHHHHc-----------------------CCEEEE--eccCCceecCCCcHHHHHHHHHHHHHhCCCCeEEee
Confidence 9988888877521 344444 3456787788899999999999999888744 4556
Q ss_pred CCCcchHHHHHHhcceeee
Q 024487 240 TGTLPLIRELQVRYMLFSM 258 (267)
Q Consensus 240 ~g~~~~~~~~~~~g~~f~~ 258 (267)
+||+ +++.+.+ ++.|+|
T Consensus 437 gggt-Da~~~~~-~v~~G~ 453 (492)
T 3khx_A 437 GGGT-YARNLDK-GVAFGA 453 (492)
T ss_dssp -------------------
T ss_pred ehhH-HHHHhhC-ceEECC
Confidence 6666 5666654 566653
No 23
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.90 E-value=4.3e-23 Score=190.53 Aligned_cols=221 Identities=13% Similarity=0.044 Sum_probs=162.5
Q ss_pred hhhhcccCCCCccEEEEEEecccc-----CCCCcccHHHHHHccc-------cC----------------c---------
Q 024487 2 RKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVKDGL-------LN----------------K--------- 44 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~-----g~~~~~Ga~~l~~~~~-------~~----------------~--------- 44 (267)
+.|++.+.+++++|+|+|++|||+ |+ .|++.++.... .+ +
T Consensus 137 ~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~---~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~ 213 (474)
T 2v8h_A 137 RTFKDNNYVPNYDVCVVVWFNAEGARFARSC---TGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASY 213 (474)
T ss_dssp HHHHHHTCCCSSCEEEEECTTCSCSSSSCTT---HHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCT
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCCCCCCc---ccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccc
Confidence 567788888999999999999998 43 68888864110 00 0
Q ss_pred --CCCCcEEEecCC----------CCCeeeeecceEEEEEEEEecCCCcC-CCC-CCCCHHHHHHHHHHHHHHhhccCCC
Q 024487 45 --LKGGPLYWIDTA----------DKQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFP 110 (267)
Q Consensus 45 --~~~d~~i~~e~~----------~~~i~~g~~G~~~~~i~v~G~~~Hss-~p~-~g~nai~~~~~~i~~l~~~~~~~~~ 110 (267)
.++|+.+..|.. ...+..+.+|..+++|+++|+++|+| .|+ .|+||+..|++++..|+.+..+.
T Consensus 214 ~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-- 291 (474)
T 2v8h_A 214 KENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-- 291 (474)
T ss_dssp TTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT--
T ss_pred cccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc--
Confidence 123455555422 12355788999999999999999999 597 79999999999999998754321
Q ss_pred CCCccccCCCCCCCeeeeEEEecCC-CccceeCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhcccccCCCcccc
Q 024487 111 PHPKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKY 189 (267)
Q Consensus 111 ~~~~~~~~~~~~~~t~~~~~i~~gg-~~~n~ip~~a~~~~diR~~p~~~~~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~ 189 (267)
.++++++.|+ +| ...|+||++|++.+|+|+.|.++.+++.++|++.++......
T Consensus 292 ------------~~t~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~------------ 346 (474)
T 2v8h_A 292 ------------NGLFTCGIID-AKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKIN------------ 346 (474)
T ss_dssp ------------TCEEECCCEE-EESCCTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCC------------
T ss_pred ------------CCEEEEEEEE-ecCCCCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhc------------
Confidence 3689999999 66 899999999999999999998888888888888777643210
Q ss_pred cCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhC-C-CC-ccccCCCcchHHHHHH---hcceeeecC
Q 024487 190 VLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVG-H-VN-PYSITGTLPLIRELQV---RYMLFSMSD 260 (267)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g-~-~~-~~~~~g~~~~~~~~~~---~g~~f~~~~ 260 (267)
..++.+++++....+|++. .++++++.+.++++++ | . .+ ...++||++ +..+.+ ..+.|+|+.
T Consensus 347 ----~~~g~~~~~~~~~~~~~~~--~d~~l~~~~~~a~~~~-G~~~~~~~~~~~ggtD-~~~~~~~~P~~~~fgp~~ 415 (474)
T 2v8h_A 347 ----DGGALSYESETLQVSPAVN--FHEVCIECVSRSAFAQ-FKKDQVRQIWSGAGHD-SCQTAPHVPTSMIFIPSK 415 (474)
T ss_dssp ----TTCCCEEEEEEEEEECCEE--CCHHHHHHHHHHHHHH-SCGGGEEEEEESSCCT-HHHHTTTSCEEEEEECCG
T ss_pred ----ccCCcEEEEEEecCCCCcc--CCHHHHHHHHHHHHHc-CCCCcceecCCcCCcc-HHHHHhhCCEEEEEeCCC
Confidence 0025666777666677764 4689999999999998 7 4 33 356677774 444443 447787763
No 24
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.90 E-value=5.7e-23 Score=190.29 Aligned_cols=206 Identities=17% Similarity=0.171 Sum_probs=150.9
Q ss_pred hhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC-CCeeeeecce---------------
Q 024487 4 LGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGM--------------- 67 (267)
Q Consensus 4 L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~-~~i~~g~~G~--------------- 67 (267)
+++.+ .++++|+|+|+++||+|+ .|++.+++++ +++|+++..++.. +.+.++++|.
T Consensus 128 ~~~~~-~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~d~~~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~ 199 (487)
T 2qyv_A 128 LESND-IAHPELEVLLTMTEERGM---EGAIGLRPNW----LRSEILINTDTEENGEIYIGCAGGENADLELPIEYQVNN 199 (487)
T ss_dssp HHCSS-SCCSSEEEEEESCTTTTC---HHHHTCCSSC----CCCSEEEECCCCCTTEEEEEECEEEEEEEEEECCEEECC
T ss_pred HHhCC-CCCCCEEEEEEeccccCC---HHHHHHHHhc----cCCCEEEEEccCCCCeEEEeccCCcceeeeccccccccC
Confidence 34333 478999999999999987 7999987644 3478999888764 4566666555
Q ss_pred --EEEEEEEEe-cCCCcCCC-CCC-CCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeC
Q 024487 68 --IPWKLHVTG-KLFHSGLP-HKA-INPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIP 142 (267)
Q Consensus 68 --~~~~i~v~G-~~~Hss~p-~~g-~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip 142 (267)
.+++|+++| +++|||.| +.| .||+..|++++..|+.+. + ..+++++.|+ ||...|+||
T Consensus 200 ~g~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~~~~-----~-----------~~~~~v~~i~-gG~~~NvIP 262 (487)
T 2qyv_A 200 FEHCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQNQ-----P-----------HFDFTLANIR-GGSIRNAIP 262 (487)
T ss_dssp CSEEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHHHHC-----T-----------TCCEEEEEEE-EESCTTBCC
T ss_pred CCeEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHhhcc-----C-----------CCcEEEEEEe-CCCcCcccC
Confidence 779999999 89999987 676 799999999999998751 1 2568999999 899999999
Q ss_pred CeeEEEEEE----------------------------------------EeCCCCCHHHHHHHHHHHHHH----------
Q 024487 143 GECTVSGDV----------------------------------------RLTPFYNVTDVMKRLQEYVDD---------- 172 (267)
Q Consensus 143 ~~a~~~~di----------------------------------------R~~p~~~~~~v~~~l~~~i~~---------- 172 (267)
++|++.+++ |+.|.++.+++++.|++.++.
T Consensus 263 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~ 342 (487)
T 2qyv_A 263 RESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVLPNGVVRNSDVIEN 342 (487)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSEEECHHHHHHHHHHHHHSCCEEEEECSSSTT
T ss_pred CceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeccccccccCHHHHHHHHHHHHhCCCcceeeccccCC
Confidence 999999999 777644444444444333210
Q ss_pred -------------------------------------hhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCC
Q 024487 173 -------------------------------------INENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNL 215 (267)
Q Consensus 173 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 215 (267)
..+..+ ..++.++ ++...+|++.++.
T Consensus 343 ~~~~s~nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~---------------~~~g~~~--~~~~~~p~~~~~~ 405 (487)
T 2qyv_A 343 VVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLA---------------SLAQGNI--NLSGDYPGWEPQS 405 (487)
T ss_dssp CEEEEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHH---------------HHHTCEE--EEEEEECCBCCCS
T ss_pred ceEeccceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHH---------------HHcCceE--EECCCCCCCCCCC
Confidence 000000 1123444 4445678998889
Q ss_pred CCHHHHHHHHHHHHHhCCCC-ccccCCCcchHHHHHHh
Q 024487 216 DSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQVR 252 (267)
Q Consensus 216 ~~~~v~~l~~a~~~~~g~~~-~~~~~g~~~~~~~~~~~ 252 (267)
++++++.+.+++++++|..+ +..++||+ +++.+.+.
T Consensus 406 d~~l~~~~~~~~~~~~G~~~~~~~~~gg~-D~~~~~~~ 442 (487)
T 2qyv_A 406 HSDILDLTKTIYAQVLGTDPEIKVIHAGL-ECGLLKKI 442 (487)
T ss_dssp CCHHHHHHHHHHHHHHSSCCEEEEESSCC-THHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEeccc-cHHHHHhh
Confidence 99999999999999889744 45667777 56677664
No 25
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.89 E-value=1.3e-22 Score=184.36 Aligned_cols=207 Identities=10% Similarity=0.048 Sum_probs=154.6
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCC-CCCeeeeecceEEEEEEEEecCCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA-DKQPCIGTGGMIPWKLHVTGKLFH 80 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~-~~~i~~g~~G~~~~~i~v~G~~~H 80 (267)
+.|++.+ .++++|+|+|++|||.| .|++.+++++ +++|+++..++. .+.+.++.+|..+++|+++|+++|
T Consensus 153 ~~l~~~~-~~~~~v~~~~~~~EE~g----~Ga~~~~~~~----~~~d~~i~~d~~~~g~i~~~~~g~~~~~i~~~G~~~H 223 (417)
T 1fno_A 153 AVLKGNP-IPHGDIKVAFTPDEEVG----KGAKHFDVEA----FGAQWAYTVDGGGVGELEFENFNAASVNIKIVGNNVH 223 (417)
T ss_dssp HHHHSSS-CCCCCEEEEEESCGGGT----CTTTTCCHHH----HCCSEEEECCCCSTTBEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCC-CCCCcEEEEEEeccccC----CChhhhchhh----cCCCEEEEeCCCCcCeeEEecCCceeEEEEEEeeccC
Confidence 5677777 78899999999999987 4777776443 357888888764 367888999999999999999999
Q ss_pred cC-CCCCCCCHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCCCH
Q 024487 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (267)
Q Consensus 81 ss-~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~~~ 159 (267)
+| .|+.|+||+..|++++..|+.+...... .....+++++.|+ +| |++|++.+|+|+.|.++.
T Consensus 224 s~~~p~~g~nAi~~~a~~i~~l~~~~~~~~~---------~~~~~~~~v~~i~-gG------p~~a~~~~d~R~~~~~~~ 287 (417)
T 1fno_A 224 PGTAKGVMVNALSLAARIHAEVPADEAPETT---------EGYEGFYHLASMK-GT------VDRAEMHYIIRDFDRKQF 287 (417)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTTSSGGGC---------CTTCCEEEEEEEE-EC------SSEEEEEEEEEESSHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhhhccCCcccc---------cccccEEEEEEEe-ec------cCeEEEEEEEeCCCHHHH
Confidence 99 6999999999999999887664211101 1124678999998 65 999999999999998888
Q ss_pred HHHHHHHHHHHHHhhhhhcccccCCCcccccCCCCCcce--EEEEEecccCCcc--cCCCCCHHHHHHHHHHHHHhCCCC
Q 024487 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRG--SLTLTFDEATNGV--ACNLDSRGFHVLCKATEEVVGHVN 235 (267)
Q Consensus 160 ~~v~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~--~~~~~~~~v~~l~~a~~~~~g~~~ 235 (267)
+++.+.|++.++..... ++. ++++++...++++ .++.++++++.+.+++++ +|.++
T Consensus 288 ~~~~~~i~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~ 347 (417)
T 1fno_A 288 EARKRKMMEIAKKVGKG-------------------LHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRD-CHITP 347 (417)
T ss_dssp HHHHHHHHHHHHHHTTT-------------------CCTTCCEEEEEEEEECCCHHHHHTSTHHHHHHHHHHHH-TTCCC
T ss_pred HHHHHHHHHHHHHHHHH-------------------cCCCceEEEEEeccccchhccccCCCHHHHHHHHHHHH-cCCCc
Confidence 88888888877765432 121 2455554444443 456788999999999999 68744
Q ss_pred -ccccCCCcchHHHHHHhcc
Q 024487 236 -PYSITGTLPLIRELQVRYM 254 (267)
Q Consensus 236 -~~~~~g~~~~~~~~~~~g~ 254 (267)
...++|++ +++.++..|+
T Consensus 348 ~~~~~~ggt-D~~~~~~~gi 366 (417)
T 1fno_A 348 EMKPIRGGT-DGAQLSFMGL 366 (417)
T ss_dssp BCCCBSSCC-HHHHHTTTTC
T ss_pred eeccceecc-chHhHHhcCC
Confidence 34556666 5777776643
No 26
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.88 E-value=4.2e-22 Score=184.54 Aligned_cols=222 Identities=20% Similarity=0.174 Sum_probs=152.9
Q ss_pred CCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC-CCe------------------eeeecceEE
Q 024487 9 LKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQP------------------CIGTGGMIP 69 (267)
Q Consensus 9 ~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~-~~i------------------~~g~~G~~~ 69 (267)
..++++|.|+|++|||+|+ .|++.++++. +++|+++..|+.. +.+ ..+++|..+
T Consensus 135 ~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~ 207 (490)
T 3mru_A 135 EIKHGPIEVLLTIDEEAGM---TGAFGLEAGW----LKGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFIT 207 (490)
T ss_dssp SCCCCSEEEEEESCSSSTT---GGGGTCCSSS----CCSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEE
T ss_pred CCCCCCEEEEEEccccccc---HhHHHhhhcc----cCCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceE
Confidence 3568999999999999997 7999887542 3567888877542 222 134689999
Q ss_pred EEEEEEe-cCCCcCC-CCCCC-CHHHHHHHHHHHHHHhhccCCCCCCccccCCCCCCCeeeeEEEecCCCccceeCCeeE
Q 024487 70 WKLHVTG-KLFHSGL-PHKAI-NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 146 (267)
Q Consensus 70 ~~i~v~G-~~~Hss~-p~~g~-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~ip~~a~ 146 (267)
++|+++| +++|||. |+.|+ ||+..|++++..|++. .+++++.|+ ||...|+||++|+
T Consensus 208 ~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~~-------------------~~~~v~~i~-gG~~~NvIP~~a~ 267 (490)
T 3mru_A 208 RQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQE-------------------LDLRLVEFR-GGSLRNAIPREAF 267 (490)
T ss_dssp EEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTTT-------------------TTCEEEEEE-ECSCTTEECCCEE
T ss_pred EEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHhc-------------------CcEEEEEEE-CCCCCcccCCccE
Confidence 9999999 9999995 89999 9999999999887641 247899999 9999999999999
Q ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHHhhhhhc-c-----cccC-----------------------------CCccc---
Q 024487 147 VSGDVRLTPFYNVTDVMKRLQEYVDDINENIE-K-----LDTR-----------------------------GPVSK--- 188 (267)
Q Consensus 147 ~~~diR~~p~~~~~~v~~~l~~~i~~~~~~~~-~-----~~~~-----------------------------~~~~~--- 188 (267)
+.+++|.......++..+++.+.++....... . .... +.+++
T Consensus 268 ~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~ 347 (490)
T 3mru_A 268 VTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVE 347 (490)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEE
T ss_pred EEEEECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCccccCCHHHHHHHHHHHHHCCCccceeccccCCCee
Confidence 99999987533333333333333322211000 0 0000 00000
Q ss_pred ----------------------ccCC-------------CCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCC
Q 024487 189 ----------------------YVLP-------------DENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH 233 (267)
Q Consensus 189 ----------------------~~~~-------------~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~ 233 (267)
|-.. ....+. ++++...+|||..++++++++.+.+++++++|.
T Consensus 348 ~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~--~~~~~~~~p~~~~~~d~~lv~~l~~a~~~~~G~ 425 (490)
T 3mru_A 348 TSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGA--QIEFSGAYPGWKPDADSEIMAIFRDMYEGIYGH 425 (490)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTC--EEEEEEEECCBCCCTTCHHHHHHHHHHHTTSSS
T ss_pred EEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCC--eEEecCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Confidence 0000 000133 445556789999999999999999999999898
Q ss_pred C-CccccCCCcchHHHHHHh-----cceeeecC
Q 024487 234 V-NPYSITGTLPLIRELQVR-----YMLFSMSD 260 (267)
Q Consensus 234 ~-~~~~~~g~~~~~~~~~~~-----g~~f~~~~ 260 (267)
. ....++||+. +..+.+. .+.|+|+.
T Consensus 426 ~~~~~~~ggg~d-~~~~~~~~p~~~~v~fGp~~ 457 (490)
T 3mru_A 426 KPNIMVIHAGLE-CGLFKEPYPNMDMVSFGPTI 457 (490)
T ss_dssp CCCCEEESSCCH-HHHTTSSCTTCEEEECCCCE
T ss_pred CCeEEEEEecHH-HHHHHHhCCCCCEEEECCCC
Confidence 4 4567777774 6666664 47899875
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.87 E-value=1.7e-21 Score=179.42 Aligned_cols=221 Identities=14% Similarity=0.092 Sum_probs=155.7
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCc--CCCCc---EEEecCC-----------C--C-----
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNK--LKGGP---LYWIDTA-----------D--K----- 58 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~--~~~d~---~i~~e~~-----------~--~----- 58 (267)
+.|++++.+++++|+|+|++|||+|+ .|++.+++++...+ +.+|. ++..+.+ . +
T Consensus 132 ~~l~~~~~~~~~~i~~i~~~~EE~g~---~G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~ 208 (470)
T 1lfw_A 132 LLLKEAGFKPKKKIDFVLGTNEETNW---VGIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLD 208 (470)
T ss_dssp HHHHHHTCCCSSEEEEEEESCTTTTC---HHHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEE
T ss_pred HHHHHcCCCCCCCEEEEEecCcccCC---ccHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCccee
Confidence 56778888899999999999999987 79999998753221 22343 2222221 0 1
Q ss_pred --------Ceee--------------------------eecceE-----EEEEEEEecCCCcCCCCCCCCHHHHHHHHHH
Q 024487 59 --------QPCI--------------------------GTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAMEALK 99 (267)
Q Consensus 59 --------~i~~--------------------------g~~G~~-----~~~i~v~G~~~Hss~p~~g~nai~~~~~~i~ 99 (267)
++.. +.+|.+ +++|+++|+++|++.|+.|+||+..+++++.
T Consensus 209 ~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~ 288 (470)
T 1lfw_A 209 KFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLD 288 (470)
T ss_dssp EEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHT
T ss_pred eeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHH
Confidence 1110 235665 8999999999999999999999999999998
Q ss_pred HHH------Hh---hccCCCCC-Ccc-----ccCCCCCCCeeeeEEEecCCCccceeCCe-eEEEEEEEeCCCCCHHHHH
Q 024487 100 VIQ------TR---FYKDFPPH-PKE-----QVYGFETPSTMKPTQWSYPGGGINQIPGE-CTVSGDVRLTPFYNVTDVM 163 (267)
Q Consensus 100 ~l~------~~---~~~~~~~~-~~~-----~~~~~~~~~t~~~~~i~~gg~~~n~ip~~-a~~~~diR~~p~~~~~~v~ 163 (267)
.++ ++ +.+.+... ... ........++++++.++ .+|++ |++.+++|+.|+++.+++.
T Consensus 289 ~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~~~g~i~-------~~p~~~a~~~~diR~~~~~~~~~i~ 361 (470)
T 1lfw_A 289 QYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFHHDDLMGDLASSPSMFD-------YEHAGKASLLNNVRYPQGTDPDTMI 361 (470)
T ss_dssp TSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCCEETTTEECEEEEEEEE-------EETTSCEEEEEEEEECTTCCHHHHH
T ss_pred hCCCcchhHHHHHHHHHhcCCCCcccccCCcccccccccceEEEEEEE-------EcCCceEEEEEEEecCCCCCHHHHH
Confidence 774 21 11111100 000 00011124577777766 47999 9999999999999999998
Q ss_pred HHHHHHHHHhhhhhcccccCCCcccccCCCCCcceEEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCC-ccccCCC
Q 024487 164 KRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGT 242 (267)
Q Consensus 164 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~l~~a~~~~~g~~~-~~~~~g~ 242 (267)
++|++.++. +. ++++...+|++.++.++++++.+.+++++++|..+ +..++|+
T Consensus 362 ~~i~~~~~~------------------------g~--~v~~~~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~g~ 415 (470)
T 1lfw_A 362 KQVLDKFSG------------------------IL--DVTYNGFEEPHYVPGSDPMVQTLLKVYEKQTGKPGHEVVIGGG 415 (470)
T ss_dssp HHHHHHHTT------------------------TE--EEECSCCBCCEECCTTCHHHHHHHHHHHHHHCCCCCEEEESSC
T ss_pred HHHHHHhcC------------------------Ce--EEEEEeCCCceeeCCCCHHHHHHHHHHHHHcCCCCceeeecCH
Confidence 888887753 13 45666678899889999999999999999889744 3456666
Q ss_pred cchHHHHHHhcceeeecC
Q 024487 243 LPLIRELQVRYMLFSMSD 260 (267)
Q Consensus 243 ~~~~~~~~~~g~~f~~~~ 260 (267)
+ +++++. .++.|+++.
T Consensus 416 ~-d~~~~~-~~v~~G~~~ 431 (470)
T 1lfw_A 416 T-YGRLFE-RGVAFGAQP 431 (470)
T ss_dssp C-GGGGST-TCEECCEEC
T ss_pred h-HHHhCC-CeEEECCCC
Confidence 5 677776 589999864
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.35 E-value=4.7e-08 Score=79.39 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=53.9
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEE---EecCCCC-CeeeeecceEEEEE
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLY---WIDTADK-QPCIGTGGMIPWKL 72 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i---~~e~~~~-~i~~g~~G~~~~~i 72 (267)
+.|++.+.+++++|+|+|++|||.|+. .|++++++++.++..++|+++ +.||+.. .+++++||..|++|
T Consensus 126 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~~~~id~g~~ept~~~~v~~~~kG~~~~~v 198 (198)
T 1q7l_A 126 RRLKVEGHRFPRTIHMTFVPDEEVGGH--QGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRV 198 (198)
T ss_dssp HHHHHTTCCCSSCEEEEEESCGGGTST--TTHHHHTTSHHHHTTCEEEEEECCCCCSSSSEEEEECCSSCGGGCC
T ss_pred HHHHHcCCCCCCCEEEEEEcccccCcc--ccHHHHHHhHHhccCCcCEEEecCccCCCCCceEEEEccEEEEEEC
Confidence 567777778899999999999999731 799999876433344567888 7788764 67899999988764
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=97.92 E-value=4.9e-06 Score=70.58 Aligned_cols=64 Identities=16% Similarity=0.040 Sum_probs=48.0
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCCC-----Ceeeeecce
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGM 67 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-----~i~~g~~G~ 67 (267)
+.|++.+.+++++|+|+|++|||.|+. .|++.+++.......++|++++.||+.. .+..+.+|.
T Consensus 116 ~~l~~~~~~~~~~i~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~ 184 (269)
T 4h2k_A 116 EEYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGG 184 (269)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTC
T ss_pred HHHHHhCCCCCccEEEEEEeccccCcc--cCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccc
Confidence 456666667889999999999999862 3999998753223456899999999853 355677766
No 30
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=97.77 E-value=1.8e-05 Score=67.05 Aligned_cols=64 Identities=11% Similarity=-0.001 Sum_probs=48.0
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCCC-----Ceeeeecce
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGM 67 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-----~i~~g~~G~ 67 (267)
+.|++.+.+++++|+|+|++|||.|+. .|++.+++.......++|++++.||+.. .+..+.+|.
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~ 184 (268)
T 3t68_A 116 ERFIAEHPDHQGSIGFLITSDEEGPFI--NGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGG 184 (268)
T ss_dssp HHHHHHCTTCSSEEEEEEESCTTSSSC--CHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGG
T ss_pred HHHHHhCCCCCCcEEEEEEeCCccCcc--cCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCC
Confidence 456666667889999999999999862 4999998753223456899999999853 255667766
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=97.42 E-value=2.3e-05 Score=68.72 Aligned_cols=62 Identities=18% Similarity=0.075 Sum_probs=44.4
Q ss_pred CCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCCCCeeeeecceEEEEEEEEecCCCcCCCCCCCC
Q 024487 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (267)
Q Consensus 10 ~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~i~~g~~G~~~~~i~v~G~~~Hss~p~~g~n 89 (267)
+++++|+|+|+++||.|+ .|+++++.. +.+|++++.|++... ++.|++.|++.|+.|.|
T Consensus 184 ~~~~~i~~~~~~~EE~G~---~G~~~~~~~-----~~~~~~i~~d~~~~~-------------~~~G~~~h~~~~~~G~g 242 (340)
T 2fvg_A 184 SPAYDTYFVFTVQEETGL---RGSAVVVEQ-----LKPTCAIVVETTTAG-------------DNPELEERKWATHLGDG 242 (340)
T ss_dssp CCSEEEEEEEECCCC--------CHHHHHH-----HCCSEEEEEEEEEEC-------------SCSTTCCSSSSCCTTSC
T ss_pred ccCCcEEEEEEcccccch---hhhHHHhhc-----cCCCEEEEEecccCC-------------CCCCCccccCCcccCCC
Confidence 578999999999999998 799988862 356899999875422 46788889888887777
Q ss_pred HHH
Q 024487 90 PLE 92 (267)
Q Consensus 90 ai~ 92 (267)
++.
T Consensus 243 ~~i 245 (340)
T 2fvg_A 243 PAI 245 (340)
T ss_dssp CEE
T ss_pred cEE
Confidence 643
No 32
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=95.30 E-value=0.0067 Score=51.87 Aligned_cols=52 Identities=19% Similarity=0.143 Sum_probs=38.2
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~ 56 (267)
+.|++.+.+++++|+|+|+++||.|. .|+++++++...+..++++++..|..
T Consensus 130 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~i~~D~~ 181 (299)
T 1rtq_A 130 RVLSENNFQPKRSIAFMAYAAEEVGL---RGSQDLANQYKSEGKNVVSALQLDMT 181 (299)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHHHHTTCEEEEEEECSCC
T ss_pred HHHHHcCCCCCceEEEEEECCccCCc---hhHHHHHHhhhhccccEEEEEEecCC
Confidence 56777777889999999999999997 89999987643221223466666653
No 33
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=95.19 E-value=0.011 Score=51.30 Aligned_cols=45 Identities=24% Similarity=0.264 Sum_probs=35.3
Q ss_pred hhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC
Q 024487 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (267)
Q Consensus 3 ~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~ 57 (267)
.|++.+ ++++|+|+|+++||.|+ .|+++++. .+.+|++++.|++.
T Consensus 187 ~l~~~~--~~~~i~~~~~~~EE~G~---~G~~~~~~-----~~~~~~~i~~d~~~ 231 (332)
T 2wyr_A 187 DLVDHE--LEGKVIFAFTVQEEVGL---KGAKFLAN-----HYYPQYAFAIDSFA 231 (332)
T ss_dssp TTTTSC--CSSEEEEEEESCGGGTS---HHHHHHTT-----TCCCSEEEEECCEE
T ss_pred HHhhcC--CCceEEEEEECccccCc---chHHHHhc-----ccCCCEEEEEeccc
Confidence 444443 67999999999999998 89998863 24578999999764
No 34
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=94.83 E-value=0.0054 Score=53.65 Aligned_cols=46 Identities=15% Similarity=0.134 Sum_probs=32.3
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~ 57 (267)
+.|++.+.+++++|+++|+++||.|+ .|++++ .+++|++++.|++.
T Consensus 199 ~~l~~~~~~~~~~i~~~~~~~EE~G~---~g~~~~-------~~~~~~~i~~D~~~ 244 (349)
T 2gre_A 199 KRLQDENVTLPYTTHFLISNNEEIGY---GGNSNI-------PEETVEYLAVDMGA 244 (349)
T ss_dssp HHHHHHTCCCSEEEEEEEESCC-------CCCCCC-------CTTEEEEEEECCCC
T ss_pred HHHHhccCCCCceEEEEEECcccCCc---hhhccc-------ccCCCEEEEEeccc
Confidence 45566666788999999999999997 687764 23568999999764
No 35
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=94.19 E-value=0.023 Score=48.19 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=38.7
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccC-cCCCCcEEEecCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDTA 56 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~-~~~~d~~i~~e~~ 56 (267)
+.|++.+.+++++|+|+|+++||.|. .|+++++++...+ .-++++++..|..
T Consensus 110 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~i~~D~~ 162 (284)
T 1tkj_A 110 LAVSRAGYQPDKHLRFAWWGAEELGL---IGSKFYVNNLPSADRSKLAGYLNFDMI 162 (284)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHSCHHHHTTEEEEEEECCC
T ss_pred HHHHhcCCCCCceEEEEEECCcccCC---cCHHHHHhhCccchhhcEEEEEEecCC
Confidence 56777777889999999999999997 8999999764211 1123567777754
No 36
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=93.86 E-value=0.027 Score=49.67 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=34.8
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~ 57 (267)
+.|++.+ ++++|+|+|+++||.|+ .|++++... +.+|++++.|++.
T Consensus 197 ~~l~~~~--~~~~v~~~~~~~EE~G~---~G~~~~~~~-----~~~d~~i~~d~~~ 242 (373)
T 1vhe_A 197 RNLQNTD--HPNIVYGVGTVQEEVGL---RGAKTAAHT-----IQPDIAFGVDVGI 242 (373)
T ss_dssp HHHHTSC--CSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEEE
T ss_pred HHHhhcC--CCceEEEEEECCcccCh---hhHHHHhcc-----cCCCEEEEEeccc
Confidence 3445443 67999999999999998 899988532 3468999988753
No 37
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=93.37 E-value=0.097 Score=35.84 Aligned_cols=44 Identities=9% Similarity=-0.012 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHHHhCCCCccccCCCcchHHHHHHhc---ceeeecCC
Q 024487 217 SRGFHVLCKATEEVVGHVNPYSITGTLPLIRELQVRY---MLFSMSDV 261 (267)
Q Consensus 217 ~~~v~~l~~a~~~~~g~~~~~~~~g~~~~~~~~~~~g---~~f~~~~~ 261 (267)
+|++++++++++++ |..+...+.+|..+++++...| +.|+|+..
T Consensus 1 ~~~v~~l~~a~~~~-g~~~~~~~~~g~TDar~~~~~gip~v~fGPg~~ 47 (88)
T 1q7l_B 1 NPWWAAFSRVCKDM-NLTLEPEIMPAAGDNRYIRAVGVPALGFSPMNR 47 (88)
T ss_dssp CHHHHHHHHHHHHT-TCCEEEEECCSCSHHHHHHHTTCCEEEECCCCS
T ss_pred ChHHHHHHHHHHHc-CCeeEeeeeceeCcHHHHHHcCCCEEEECCCCC
Confidence 47899999999997 7754444444444888888755 67888764
No 38
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=92.79 E-value=0.051 Score=47.42 Aligned_cols=39 Identities=21% Similarity=0.090 Sum_probs=32.1
Q ss_pred CCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC
Q 024487 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (267)
Q Consensus 11 ~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~ 57 (267)
++++|+++|+++||.|+ .|++++... +.+|++++.|++.
T Consensus 200 ~~~~i~~~~~~~EE~g~---~G~~~~~~~-----~~~~~~i~~d~~~ 238 (353)
T 1y0y_A 200 AKADVYFVATVQEEVGL---RGARTSAFG-----IEPDYGFAIDVTI 238 (353)
T ss_dssp CSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEEE
T ss_pred CCCeEEEEEECCcccch---hHHHHHhhc-----cCCCEEEEEeccc
Confidence 67899999999999998 899988642 3468999988753
No 39
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=90.58 E-value=0.18 Score=45.56 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=31.8
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHcc
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~ 40 (267)
+.|++.+..++++|+|+|..+||.|. .|+++++++.
T Consensus 282 ~~l~~~~~~~~~~i~f~~~~~EE~gl---~Gs~~~~~~~ 317 (444)
T 3iib_A 282 KHILDLPQKPERTIRVVLYAAEELGL---LGGKTYAKEH 317 (444)
T ss_dssp HHHHTSSSCCSEEEEEEEESCGGGTS---HHHHHHHHHT
T ss_pred HHHHhcCCCCCCeEEEEEECCcccCC---cCHHHHHHhh
Confidence 56777777899999999999999997 8999999865
No 40
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=87.84 E-value=0.55 Score=40.13 Aligned_cols=51 Identities=16% Similarity=0.220 Sum_probs=33.8
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCC---C-------cccHHHHHHccccCcCCCCcEEEec
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAI---T-------GVGVDALVKDGLLNKLKGGPLYWID 54 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~---~-------~~Ga~~l~~~~~~~~~~~d~~i~~e 54 (267)
+.|++.+ ++++|.|+|..+||.|.. . ..|++++++.......++.+.+..|
T Consensus 140 r~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD 200 (309)
T 3tc8_A 140 RQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLD 200 (309)
T ss_dssp HHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEE
T ss_pred HHHHhCC--CCCcEEEEEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEec
Confidence 4556553 889999999999999840 0 0589999975432222344556555
No 41
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=86.75 E-value=0.64 Score=39.86 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=32.3
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCC---------C--cccHHHHHHccccCcCCCCcEEEec
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAI---------T--GVGVDALVKDGLLNKLKGGPLYWID 54 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~---------~--~~Ga~~l~~~~~~~~~~~d~~i~~e 54 (267)
+.|++. .++++|.|+|..+||.|.. . ..|++++++.......++.+.+..|
T Consensus 142 r~l~~~--~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD 203 (314)
T 3gux_A 142 RQIQKE--QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLD 203 (314)
T ss_dssp HHHHHS--CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEE
T ss_pred HHHHhC--CCCCcEEEEEECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEe
Confidence 456655 3889999999999999840 0 0589999875432222344556555
No 42
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=83.52 E-value=0.86 Score=39.25 Aligned_cols=39 Identities=26% Similarity=0.163 Sum_probs=30.3
Q ss_pred CCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC
Q 024487 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (267)
Q Consensus 11 ~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~ 57 (267)
++.+++++|+++||.|+ .|+..... .+.+|+++..|.+.
T Consensus 189 ~~~~~~~~~t~~EEvG~---~Ga~~~~~-----~i~~~~~i~~D~~~ 227 (348)
T 1ylo_A 189 LPAEVWLVASSSEEVGL---RGGQTATR-----AVSPDVAIVLDTAC 227 (348)
T ss_dssp CSSEEEEEEESCCTTSS---HHHHHHHH-----HHCCSEEEEECCCC
T ss_pred CCceEEEEEEcccccch---hHHHHhhc-----ccCCCEEEEEeccc
Confidence 56899999999999997 78877653 23467888888653
No 43
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=83.21 E-value=0.72 Score=40.27 Aligned_cols=38 Identities=16% Similarity=0.095 Sum_probs=29.8
Q ss_pred CCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecC
Q 024487 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (267)
Q Consensus 10 ~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~ 55 (267)
.++.+++++|+..||.|+ +|+...... +.||.+|..|.
T Consensus 201 ~~~~~v~~~ft~qEEvG~---~Ga~~a~~~-----~~pd~~i~~D~ 238 (355)
T 3kl9_A 201 KLGNELYLGSNVQEEVGL---RGAHTSTTK-----FDPEVFLAVDC 238 (355)
T ss_dssp CCSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEE
T ss_pred CCCceEEEEEECccccCc---chhHHHHhc-----cCCCEEEEecC
Confidence 478999999999999998 787765432 34788888774
No 44
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=81.02 E-value=0.89 Score=39.68 Aligned_cols=44 Identities=11% Similarity=-0.048 Sum_probs=31.6
Q ss_pred hhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecC
Q 024487 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (267)
Q Consensus 3 ~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~ 55 (267)
+|++.+. +..+++++|+..||.|+ +|+..... .+.+|.++..|.
T Consensus 196 ~l~~l~~-~~~~v~~~ft~qEEVG~---~ga~~aa~-----~i~pd~~i~~Dv 239 (354)
T 2vpu_A 196 AARQLGD-HEADIYIVGSVQEEVGL---RGARVASY-----AINPEVGIAMDV 239 (354)
T ss_dssp HHHHCCC-CSSEEEEEECSCCTTTS---HHHHHHHH-----HHCCSEEEEEEE
T ss_pred HHHHhhc-CCCeEEEEEECCcccCc---cchhhhhc-----ccCCCEEEEecc
Confidence 4444432 77899999999999998 78776542 235678887764
No 45
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=79.58 E-value=0.95 Score=38.99 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=29.5
Q ss_pred CCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCC
Q 024487 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (267)
Q Consensus 11 ~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~ 56 (267)
++++++++|+++||.|+ .|+.... ..+.+|++++.|.+
T Consensus 192 ~~~~~~~~~t~~EEvG~---~Ga~~~~-----~~i~~~~~i~~D~~ 229 (346)
T 1vho_A 192 HPWDVYVVFSVQEETGC---LGALTGA-----YEINPDAAIVMDVT 229 (346)
T ss_dssp CSSEEEEEEECTTSSSH---HHHHHTT-----CCCCCSEEEEEEEE
T ss_pred CCceEEEEEECCcccch---hhHHHHh-----cccCCCEEEEeecc
Confidence 56899999999999997 7887643 23567888888754
No 46
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=78.12 E-value=1 Score=38.75 Aligned_cols=28 Identities=25% Similarity=0.288 Sum_probs=23.1
Q ss_pred CCCCccEEEEEEecccc--------CCCCcccHHHHHHc
Q 024487 9 LKLKSTVIAVFIASEEN--------SAITGVGVDALVKD 39 (267)
Q Consensus 9 ~~~~~~I~li~~~dEE~--------g~~~~~Ga~~l~~~ 39 (267)
.+++++|.|+|..+||. |. .|+++++++
T Consensus 155 ~~~~~~i~~~~~~~EE~~~~~~~~~gl---~Gs~~~~~~ 190 (329)
T 2afw_A 155 SKPDLSLQLIFFDGEEAFLHWSPQDSL---YGSRHLAAK 190 (329)
T ss_dssp --CCEEEEEEEESCCSCSSSCCSSSSC---HHHHHHHHH
T ss_pred CCCCccEEEEEecCcccccccCCCccc---hhHHHHHHH
Confidence 46889999999999998 55 799999875
No 47
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=75.93 E-value=1.4 Score=39.17 Aligned_cols=49 Identities=14% Similarity=0.179 Sum_probs=33.1
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccC-cCCCCcEEEecC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDT 55 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~-~~~~d~~i~~e~ 55 (267)
+.|++. .++++|+|++..+||.|. .|+++++++...+ .-+..+.+..|.
T Consensus 253 ~~l~~~--~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~in~D~ 302 (421)
T 2ek8_A 253 RVMSKL--KTDTELRFITFGAEENGL---IGSKKYAASLSEDEIKRTIGMFQLDM 302 (421)
T ss_dssp HHHTTS--CCSSEEEEEEESSSTTTS---HHHHHHHTTCCHHHHHHEEEEEEECS
T ss_pred HHHhcc--CCCceEEEEEECCccccc---hhHHHHHHhCccchhhcEEEEEEecc
Confidence 345543 578999999999999997 8999999753211 001235566664
No 48
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=74.44 E-value=1.2 Score=38.70 Aligned_cols=43 Identities=23% Similarity=0.187 Sum_probs=30.5
Q ss_pred hhhcccCCCCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecC
Q 024487 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (267)
Q Consensus 3 ~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~ 55 (267)
+|++.+ .+.+++++|+..||.|+ +|+.... ..+.||.+|..|.
T Consensus 191 ~l~~l~--~~~~~~~~ft~qEEVG~---~Ga~~aa-----~~i~pd~~i~vDv 233 (343)
T 3isx_A 191 VFKRIK--PAVTLYGVFSVQEEVGL---VGASVAG-----YGVPADEAIAIDV 233 (343)
T ss_dssp HHHHCC--CSSEEEEEEECCCCTTS---CCSTTTG-----GGCCCSEEEEEEE
T ss_pred HHHhcc--CCCeEEEEEECCcccCc---hhHHHHh-----hcCCCCEEEEEeC
Confidence 444443 26899999999999998 6775432 2346788888874
No 49
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=72.48 E-value=5.5 Score=33.69 Aligned_cols=51 Identities=10% Similarity=0.150 Sum_probs=33.8
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCC-----------cccHHHHHHccccCcCCCCcEEEec
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAIT-----------GVGVDALVKDGLLNKLKGGPLYWID 54 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~-----------~~Ga~~l~~~~~~~~~~~d~~i~~e 54 (267)
+.|++. +++++|.|+|...||.|... ..|++++++.......++.+.+..|
T Consensus 140 r~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlD 201 (309)
T 4fuu_A 140 RLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLD 201 (309)
T ss_dssp HHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEEC
T ss_pred HHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeee
Confidence 455554 67899999999999988310 1588888876433333344566666
No 50
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=67.87 E-value=16 Score=23.61 Aligned_cols=31 Identities=10% Similarity=0.178 Sum_probs=23.7
Q ss_pred CeeEEEEEEEeCCCCCHHHHHHHHHHHHHHh
Q 024487 143 GECTVSGDVRLTPFYNVTDVMKRLQEYVDDI 173 (267)
Q Consensus 143 ~~a~~~~diR~~p~~~~~~v~~~l~~~i~~~ 173 (267)
+--++.+|+|..-+...+..++++.+.+...
T Consensus 15 dgqeieidirvstgkeleralqelekalara 45 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARA 45 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhc
Confidence 4578999999998777777777777766554
No 51
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=65.85 E-value=2.9 Score=39.43 Aligned_cols=31 Identities=10% Similarity=0.140 Sum_probs=27.7
Q ss_pred ccCCCCccEEEEEEeccccCCCCcccHHHHHHcc
Q 024487 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (267)
Q Consensus 7 ~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~ 40 (267)
.+.+++++|+|++..+||.|. .|+.+++++.
T Consensus 320 ~g~~p~r~I~f~~~~~EE~gl---~GS~~~~~~~ 350 (640)
T 3kas_A 320 DGFQPSRSIIFASWSAGDFGS---VGATEWLEGY 350 (640)
T ss_dssp SCCCCSEEEEEEEESSGGGTS---HHHHHHHHHT
T ss_pred cCCCCCCcEEEEEECCcccCc---hhHHHHHHhh
Confidence 367899999999999999997 8999999865
No 52
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=65.52 E-value=2.8 Score=35.75 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=27.1
Q ss_pred EEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEecCCC
Q 024487 15 VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (267)
Q Consensus 15 I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~ 57 (267)
++++|+++||.|+ .|+...... ..+.+++|++++.|++.
T Consensus 183 i~~~~t~~EEvG~---~Ga~~a~~~-~~~~~~~~~~i~~D~~~ 221 (321)
T 3cpx_A 183 GIIAFTCWEEHGG---GSVAYLARW-IYETFHVKQSLICDITW 221 (321)
T ss_dssp EEEEEESSTTTTC---CSHHHHHHH-HHHHHCCCEEEECCCEE
T ss_pred cEEEEECCccCch---hcchhhhhc-cccccCCCEEEEEeCcc
Confidence 9999999999998 677753210 01124578999998753
No 53
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=64.84 E-value=5 Score=33.95 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=25.7
Q ss_pred cCCCCccEEEEEEeccccCCC-----CcccHHHHHHcc
Q 024487 8 KLKLKSTVIAVFIASEENSAI-----TGVGVDALVKDG 40 (267)
Q Consensus 8 ~~~~~~~I~li~~~dEE~g~~-----~~~Ga~~l~~~~ 40 (267)
+.+++++|.|+|...||.|.. ...|+++++++.
T Consensus 127 ~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~ 164 (312)
T 4f9u_A 127 RNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKL 164 (312)
T ss_dssp GSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHH
T ss_pred cCCCCceEEEEEecCccccccCCccccccChHHHHHHH
Confidence 457899999999999998711 017999999764
No 54
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=62.93 E-value=3.8 Score=39.11 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=27.5
Q ss_pred ccCCCCccEEEEEEeccccCCCCcccHHHHHHcc
Q 024487 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (267)
Q Consensus 7 ~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~ 40 (267)
.+.+++++|+|++..+||.|. .|+.+++++.
T Consensus 365 ~g~~p~r~I~f~~~~~EE~Gl---~GS~~~~~~~ 395 (707)
T 3fed_A 365 KGWRPRRTIIFASWDAEEFGL---LGSTEWAEEN 395 (707)
T ss_dssp TTCCCSEEEEEEEESCGGGTS---HHHHHHHHHH
T ss_pred ccCCCCCCEEEEEeCCccccc---hhHHHHHHhc
Confidence 467899999999999999997 8999999764
No 55
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=60.44 E-value=4.2 Score=34.95 Aligned_cols=28 Identities=25% Similarity=0.252 Sum_probs=24.8
Q ss_pred CCCCccEEEEEEecccc--------CCCCcccHHHHHHc
Q 024487 9 LKLKSTVIAVFIASEEN--------SAITGVGVDALVKD 39 (267)
Q Consensus 9 ~~~~~~I~li~~~dEE~--------g~~~~~Ga~~l~~~ 39 (267)
..++++|.|+|..+||. |. .|++++++.
T Consensus 159 ~~~~~~i~fv~~~~EE~f~~w~~~~gl---~GS~~~a~~ 194 (330)
T 3pb6_X 159 QAAPVTLQLLFLDGEEALKEWGPKDSL---YGSRHLAQL 194 (330)
T ss_dssp TTCSEEEEEEEESCCSCSSCCSTTSSC---HHHHHHHHH
T ss_pred CCCCCcEEEEEEcCcccccccCCCCCC---ccHHHHHHH
Confidence 57899999999999998 76 899999864
No 56
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=57.36 E-value=8.7 Score=32.85 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=25.0
Q ss_pred cCCCCccEEEEEEeccccCCCC-----cccHHHHHHc
Q 024487 8 KLKLKSTVIAVFIASEENSAIT-----GVGVDALVKD 39 (267)
Q Consensus 8 ~~~~~~~I~li~~~dEE~g~~~-----~~Ga~~l~~~ 39 (267)
+.+++++|.|+|..+||.|... ..|++++++.
T Consensus 151 ~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~ 187 (330)
T 4fai_A 151 LKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKK 187 (330)
T ss_dssp GGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHH
T ss_pred cCCCCccEEEEEeccccccccccccchhhhhHHHHhc
Confidence 4578999999999999987310 1599999875
No 57
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=52.13 E-value=0.088 Score=44.38 Aligned_cols=82 Identities=10% Similarity=-0.136 Sum_probs=38.6
Q ss_pred CCccEEEEEEeccccCCCCcccHHHHHHccccCcCCCCcEEEec-CCCCCeeeeecceEEEEEEEEecCCCcCCCCCCCC
Q 024487 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWID-TADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (267)
Q Consensus 11 ~~~~I~li~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e-~~~~~i~~g~~G~~~~~i~v~G~~~Hss~p~~g~n 89 (267)
+...+.++++.+||.+. .|.+.+..+..... .++...+ .....+..+..+.....+.+.+...|++.+..+.+
T Consensus 115 ~~~~~~~~~~~~ee~~~---~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (354)
T 2wzn_A 115 RYGVVGVLPPHLRRGQE---DKGSKIDWDQIVVD---VGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRI 188 (354)
T ss_dssp EEEEECCCCGGGC------------CCGGGCCEE---CSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHH
T ss_pred ccceEEEeeeeeEeccc---ccccchhhhhhhhh---hcccchhhhhccccccceeeeeeeeeEeecccccccccccccc
Confidence 45677788899999876 56665543322111 1111111 11223445566666777778888888776654444
Q ss_pred HHHHHHHHH
Q 024487 90 PLELAMEAL 98 (267)
Q Consensus 90 ai~~~~~~i 98 (267)
++..+..++
T Consensus 189 ~~~~~~~~~ 197 (354)
T 2wzn_A 189 CLYAMIEAA 197 (354)
T ss_dssp HHHHHHHHH
T ss_pred hhhhHHHHH
Confidence 444444333
No 58
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=49.59 E-value=33 Score=27.92 Aligned_cols=40 Identities=18% Similarity=-0.006 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCccccCCCcchHHHHHHhcce
Q 024487 216 DSRGFHVLCKATEEVVGHVNPYSITGTLPLIRELQVRYML 255 (267)
Q Consensus 216 ~~~~v~~l~~a~~~~~g~~~~~~~~g~~~~~~~~~~~g~~ 255 (267)
++++++.+.+++++..|.++....+||..++..+.+.|++
T Consensus 190 ~~~l~~~l~~a~~~~~gi~~~~~~sgggtD~~~~~~~g~p 229 (268)
T 3t68_A 190 TGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQ 229 (268)
T ss_dssp CCHHHHHHHHHHHHHHSSCCEEESSCCCHHHHHHHHHTCE
T ss_pred chHHHHHHHHHHHHHhCCCcEEecCccccHHHHHHhcCCC
Confidence 4689999999999877876554444444467777776664
No 59
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=34.00 E-value=52 Score=26.73 Aligned_cols=40 Identities=15% Similarity=0.046 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCccccCCCcchHHHHHHhcce
Q 024487 216 DSRGFHVLCKATEEVVGHVNPYSITGTLPLIRELQVRYML 255 (267)
Q Consensus 216 ~~~~v~~l~~a~~~~~g~~~~~~~~g~~~~~~~~~~~g~~ 255 (267)
+.++++.+.+++++..|.++....+||..+++.+.+.|++
T Consensus 190 ~~~l~~~l~~aa~~~~gi~~~~~~~gggtDa~~~~~~g~p 229 (269)
T 4h2k_A 190 PGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAE 229 (269)
T ss_dssp --HHHHHHHHHHHHHHSCCCEEECC--CHHHHHHHTTTCE
T ss_pred CcHHHHHHHHHHHHHhCCCCEEecCCCCchHHHHHhhCCC
Confidence 4679999999999877886665555555578888876653
No 60
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=33.00 E-value=46 Score=29.54 Aligned_cols=30 Identities=10% Similarity=0.037 Sum_probs=22.0
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCCCcccHHHH
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDAL 36 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~~~~Ga~~l 36 (267)
++|.+.+ ....+++++| ..||.|+ +|+...
T Consensus 245 ~al~~~~-~~~~~v~~~f-d~EEVGs---~ga~gA 274 (428)
T 2ijz_A 245 EALLNAE-GDENCILVCT-DHEEVGS---CSHCGA 274 (428)
T ss_dssp THHHHTT-SCSSSCEEEE-CBSCTTT---TCHHHH
T ss_pred HHHHhcc-cCCceEEEEE-eccccCc---cchhhh
Confidence 4555554 5668898888 9999998 677654
No 61
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=28.54 E-value=51 Score=19.79 Aligned_cols=28 Identities=11% Similarity=0.367 Sum_probs=22.5
Q ss_pred CeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 024487 143 GECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (267)
Q Consensus 143 ~~a~~~~diR~~p~~~~~~v~~~l~~~i~~~~ 174 (267)
+.+++++|.+-.| .+++++|+.++++..
T Consensus 21 d~Vsf~Ld~~~iP----~~~IeKIE~lL~e~~ 48 (52)
T 3kz5_E 21 DKMVLNLDRSRVP----TECIEKIEAILKELE 48 (52)
T ss_dssp TEEEEEEETTTSC----HHHHHHHHHHHHHHC
T ss_pred CeEEEEeccccCC----HHHHHHHHHHHHHHh
Confidence 6788888876664 889999999998754
No 62
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=25.40 E-value=31 Score=31.03 Aligned_cols=25 Identities=28% Similarity=0.389 Sum_probs=19.8
Q ss_pred hhhhcccCCCCccEEEEEEeccccCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSA 27 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~ 27 (267)
++|.+.. .++.+++++|+..||.|+
T Consensus 271 ~al~~~~-~~~~~~~~~~~d~EEVGs 295 (461)
T 2glj_A 271 EAMLEMK-NAKKTCITILVDKEEVGS 295 (461)
T ss_dssp HHHHTCC-SCSSCEEEEEECCGGGTC
T ss_pred HHHHhhc-cCCCeEEEEEEccCCCCC
Confidence 4455544 467899999999999998
No 63
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=21.91 E-value=1e+02 Score=27.43 Aligned_cols=43 Identities=9% Similarity=-0.150 Sum_probs=28.8
Q ss_pred CCeeeeEEEecCCCccceeCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHH
Q 024487 123 PSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDD 172 (267)
Q Consensus 123 ~~t~~~~~i~~gg~~~n~ip~~a~~~~diR~~p~~~~~~v~~~l~~~i~~ 172 (267)
.+|+|++.++. ..+.+++.+++|++.....+.+.+.+++....
T Consensus 345 ~~s~nl~~~~~-------~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~ 387 (487)
T 2qyv_A 345 ETSLSIGVLKT-------EDNFVRSTMLVRSLIESGKSYVASLLKSLASL 387 (487)
T ss_dssp EEEEEEEEEEE-------CSSEEEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EeccceEEEEE-------cCCeEEEEEEccCCCHHHHHHHHHHHHHHHHH
Confidence 47888888883 23578999999998654444555555544443
No 64
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=21.84 E-value=1.6e+02 Score=18.52 Aligned_cols=25 Identities=20% Similarity=0.256 Sum_probs=15.8
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHh
Q 024487 148 SGDVRLTPFYNVTDVMKRLQEYVDDI 173 (267)
Q Consensus 148 ~~diR~~p~~~~~~v~~~l~~~i~~~ 173 (267)
..|+|+- +.+.+...+.+++.+++.
T Consensus 2 emdirfr-gddleafekalkemirqa 26 (85)
T 2kl8_A 2 EMDIRFR-GDDLEAFEKALKEMIRQA 26 (85)
T ss_dssp EEEEEEE-CSSHHHHHHHHHHHHHHH
T ss_pred ccceeec-CCcHHHHHHHHHHHHHHH
Confidence 4566665 455777777777776653
No 65
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=21.31 E-value=35 Score=30.57 Aligned_cols=25 Identities=20% Similarity=0.238 Sum_probs=19.4
Q ss_pred hhhhcccCCCCccEEEEEEeccccCCC
Q 024487 2 RKLGETKLKLKSTVIAVFIASEENSAI 28 (267)
Q Consensus 2 ~~L~~~~~~~~~~I~li~~~dEE~g~~ 28 (267)
++|.+. .++.+++++++..||.|++
T Consensus 259 ~al~~~--~~~~~~~~~~~d~EEVGs~ 283 (450)
T 2glf_A 259 RALLSA--NPEKSIGVIFFDKEEIGSD 283 (450)
T ss_dssp HHHHHC--CCSSCEEEEEESCGGGTSC
T ss_pred HHHHhc--CCCceEEEEEEcccccCCc
Confidence 345554 4678999999999999984
Done!